RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP2B2 (Homo sapiens)

Ensembl gene IDs: ENSG00000157087

Ensembl transcript IDs: ENST00000352432.9, ENST00000360273.7, ENST00000397077.6, ENST00000452124.2, ENST00000460129.5, ENST00000467702.3, ENST00000468426.1, ENST00000480680.2, ENST00000638646.2, ENST00000643662.1, ENST00000644553.1, ENST00000644807.1, ENST00000645850.1, ENST00000646379.1

Found 3232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGC +
Preference number: 1 (lower is better)
Translates to: FRLLLVAAWVSWVPG*MGARKAGGSGVHEG
Trigger: GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 90 bp CAGTACATTCATGCGGGGGACGTGGTGGCTGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAA +
Preference number: 1 (lower is better)
Translates to: QYIHAGDVVAGRVHG*SMSGWEPGRACFGK
Trigger: TTTCCCAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGCCACCACGTCCCCCGCATGAATGTACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 90 bp TGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGG +
Preference number: 1 (lower is better)
Translates to: CTVHSCGGRGGWAGA*LVHVWVGARKGLFW
Trigger: CCAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAG +
Preference number: 1 (lower is better)
Translates to: RGGLKVYSTFMRGTW*LGGCMAGPCLGGSQ
Trigger: CTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 90 bp GTCAGAATGCACCAGGTTGGCAGCCTCCTGCAGGTAGCGCAAGAGTaGGCTAGGGGAGTGAGGGTTCCGAGAAGGCCCAGGCAAGAACTG +
Preference number: 1 (lower is better)
Translates to: VRMHQVGSLLQVAQE*ARGVRVPRRPRQEL
Trigger: CAGTTCTTGCCTGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACTCTTGCGCTACCTGCAGGAGGCTGCCAACCTGGTGCATTCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR GCA 90 bp AAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTT +
Preference number: 1 (lower is better)
Translates to: KVYSTFMRGTWWLGG*MAGPCLGGSQEGLV
Trigger: AACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 90 bp ACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGC +
Preference number: 1 (lower is better)
Translates to: TRGGLKVYSTFMRGT*WLGGCMAGPCLGGS
Trigger: GCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR TCA 90 bp CAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTGCTTGAGCGCGGCATCTTCTTCCAG +
Preference number: 1 (lower is better)
Translates to: QVDPTVDGAVVLVEG*RRARVLLERGIFFQ
Trigger: CTGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR TCA 90 bp TCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCA +
Preference number: 1 (lower is better)
Translates to: SLQYLVSDCCSLLLG*VGCLDGWVPGKRVA
Trigger: TGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 90 bp AGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATaGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTCCTCCTCTC +
Preference number: 1 (lower is better)
Translates to: SLRAVLCRSWHPWAG*PLVLQTQEAFSPPL
Trigger: GAGAGGAGGAGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 90 bp CATCGCTCCCTGTTCCCTAAGCCAGGCTCCACTGAGAACCCCTCCTaGCTCCGAATGAACATGGAGCATGGTGTGCAAACACAGCTATCC +
Preference number: 1 (lower is better)
Translates to: HRSLFPKPGSTENPS*LRMNMEHGVQTQLS
Trigger: GGATAGCTGTGTTTGCACACCATGCTCCATGTTCATTCGGAGCCAGGAGGGGTTCTCAGTGGAGCCTGGCTTAGGGAACAGGGAGCGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 90 bp GTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGT +
Preference number: 1 (lower is better)
Translates to: VFSPVFGFRLLLVAA*VSWVPGWMGARKAG
Trigger: ACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR TCA 90 bp TGTTCCCTAAGCCAGGCTCCACTGAGAACCCCTCCTGGCTCCGAATaGACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATG +
Preference number: 1 (lower is better)
Translates to: CSLSQAPLRTPPGSE*TWSMVCKHSYPDVM
Trigger: CATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGTTCATTCGGAGCCAGGAGGGGTTCTCAGTGGAGCCTGGCTTAGGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR GCA 90 bp AAGCTCCGCCTGAGTTGCAAGAAGGAAACTCCTCAGAGCTCTCTCTaGTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACT +
Preference number: 1 (lower is better)
Translates to: KLRLSCKKETPQSSL*SPPKMSDSAAPGVT
Trigger: AGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAGAGAGCTCTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CCA 90 bp TCTAATGGTGGGATTTTGGACACAATGGCAGGAGAGAGATTTGGGTaGGAGGCTTGTCAGAATGCACCAGGTTGGCAGCCTCCTGCAGGT +
Preference number: 1 (lower is better)
Translates to: SNGGILDTMAGERFG*EACQNAPGWQPPAG
Trigger: ACCTGCAGGAGGCTGCCAACCTGGTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAATCCCACCATTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR TCA 90 bp GGGCTGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTaGGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTCCTGGATA +
Preference number: 1 (lower is better)
Translates to: GLALVAFVLESNKHI*GLVTPLVMQFLSWI
Trigger: TATCCAGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR GCA 90 bp CATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTaGCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTT +
Preference number: 1 (lower is better)
Translates to: HSGDALLKVLLPGGF*QVGWADFEPQTLKF
Trigger: AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 90 bp CTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTaGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTA +
Preference number: 1 (lower is better)
Translates to: LPCRRAVGWLWWRLY*NPISTSEGWSPLWL
Trigger: TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 90 bp ACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTaGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGG +
Preference number: 1 (lower is better)
Translates to: TCRSFLPCRRAVGWL*WRLYWNPISTSEGW
Trigger: CCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 90 bp CGCTCTTCCCTACAAGAGCCTCTAATGGTGGGATTTTGGACACAATaGCAGGAGAGAGATTTGGGTGGGAGGCTTGTCAGAATGCACCAG +
Preference number: 1 (lower is better)
Translates to: RSSLQEPLMVGFWTQ*QERDLGGRLVRMHQ
Trigger: CTGGTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAATCCCACCATTAGAGGCTCTTGTAGGGAAGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR TCA 90 bp ACCCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTaGCTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAA +
Preference number: 1 (lower is better)
Translates to: TLKFFHRHPDVGPPS*LWLFSRVALILFVE
Trigger: TTCCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 90 bp GAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTaGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCC +
Preference number: 1 (lower is better)
Translates to: EKGSVGGNVGFLSSI*FPIVARCCLGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 90 bp CGGAGCATGTTGTTAAACCCCTCAGGATGGCAACTCGGTAGCATTTaGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGA +
Preference number: 1 (lower is better)
Translates to: RSMLLNPSGWQLGSI*LLPEPLTVVTLLNG
Trigger: TCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCTACCGAGTTGCCATCCTGAGGGGTTTAACAACATGCTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 90 bp TGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTaGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCA +
Preference number: 1 (lower is better)
Translates to: CRSFLPCRRAVGWLW*RLYWNPISTSEGWS
Trigger: TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR TCA 90 bp ATACATTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTaGAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTG +
Preference number: 1 (lower is better)
Translates to: IHSEILLHDIQVMRS*RSSFQEDFARWDGL
Trigger: CAGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR GCA 90 bp TTGAGGGGGAGACAAGTTGGTGAGCTTAGCTCTCAGAACCAAATCTaGCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGC +
Preference number: 1 (lower is better)
Translates to: LRGRQVGELSSQNQI*HLLLEPLSRGQKRS
Trigger: GCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCTGAGAGCTAAGCTCACCAACTTGTCTCCCCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR TCA 90 bp TCCTCTCCTGGATACATTCAGAGATACTTCTTCACGACATTCAGGTaGTGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGT +
Preference number: 1 (lower is better)
Translates to: SSPGYIQRYFFTTFR*CALEGPPSRRILPG
Trigger: ACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAATGTATCCAGGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR TCA 90 bp CTTCACGACGCGGATCCGGCTTCAAGGAAGCCAAGAGTCTGGGATTaGTTCACATTCATTTCAGGCTCAAGGTTAAAGACTCACAACCTC +
Preference number: 1 (lower is better)
Translates to: LHDADPASRKPRVWD*FTFISGSRLKTHNL
Trigger: GAGGTTGTGAGTCTTTAACCTTGAGCCTGAAATGAATGTGAATCAATCCCAGACTCTTGGCTTCCTTGAAGCCGGATCCGCGTCGTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460129.5
3UTR CCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTG +
Preference number: 1 (lower is better)
Translates to: SNSIAARERVCGWKR*FSLQYLVSDCCSLL
Trigger: CAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 90 bp CTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTaGTCACCCCTTTGGTTATGCAGTTCCTCTCCTGGATACATTCAG +
Preference number: 1 (lower is better)
Translates to: LWWRLYWNPISTSEG*SPLWLCSSSPGYIQ
Trigger: CTGAATGTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR TCA 90 bp TACTCTATTATAAAATATGTGCACACAAGAGTTAGCAAAGTGTGGTaGCCCCCGAGAGGAAAGGTCCAGGAGGGAGAGCACCACAGGCAT +
Preference number: 1 (lower is better)
Translates to: YSIIKYVHTRVSKVW*PPRGKVQEGEHHRH
Trigger: ATGCCTGTGGTGCTCTCCCTCCTGGACCTTTCCTCTCGGGGGTCACCACACTTTGCTAACTCTTGTGTGCACATATTTTATAATAGAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR TCA 90 bp GGATGTGGGGCTGGGAATCTTCGATCCGGAATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTCGAGATTCAGGCTTTTCTAAACCTT +
Preference number: 1 (lower is better)
Translates to: GCGAGNLRSGIQDEP*SYGWRFEIQAFLNL
Trigger: AAGGTTTAGAAAAGCCTGAATCTCGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCCCAGCCCCACATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR CCA 90 bp TTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTaGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAG +
Preference number: 1 (lower is better)
Translates to: FYTCRSFLPCRRAVG*LWWRLYWNPISTSE
Trigger: CTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR GCA 90 bp TGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATaGAGTTCCTCTCCTGGATACATTCAGAGATACTTCTTCACGACA +
Preference number: 1 (lower is better)
Translates to: WNPISTSEGWSPLWL*SSSPGYIQRYFFTT
Trigger: TGTCGTGAAGAAGTATCTCTGAATGTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 90 bp AAGTTGGTGAGCTTAGCTCTCAGAACCAAATCTGCCACTTACTCCTaGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGGATGATG +
Preference number: 1 (lower is better)
Translates to: KLVSLALRTKSATYS*SPCLEDRKEAMWMM
Trigger: CATCATCCACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCTGAGAGCTAAGCTCACCAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR TCA 90 bp GGTATGATCTCTACATTAAAATCAGGAGAGCTTGGTTTGGAACTTTaGAAAGGCCTGGGGACTTCCTGCTATTGTCTGACTTCCCTCCTG +
Preference number: 1 (lower is better)
Translates to: GMISTLKSGELGLEL*KGLGTSCYCLTSLL
Trigger: CAGGAGGGAAGTCAGACAATAGCAGGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAGCTCTCCTGATTTTAATGTAGAGATCATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CCA 90 bp AAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGC +
Preference number: 1 (lower is better)
Translates to: KKSSNSIAARERVCG*KRWFSLQYLVSDCC
Trigger: GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 90 bp AGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTG +
Preference number: 1 (lower is better)
Translates to: SEKEFKQHRSQRKGL*VETLVFSPVFGFRL
Trigger: CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 90 bp TTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTaGTTATGCAGTTCCTCTCCTGGATACATTCAGAGATACTTCTTC +
Preference number: 1 (lower is better)
Translates to: LYWNPISTSEGWSPL*LCSSSPGYIQRYFF
Trigger: GAAGAAGTATCTCTGAATGTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 90 bp ACAAGACAGGTTCAGAGTCCTTTGAGCCAGTGCAGTCATTTTAATTaGTCCAGTCTCAGAAATAGGACTGCCTCTCTCTTGTCATCTCTA +
Preference number: 1 (lower is better)
Translates to: TRQVQSPLSQCSHFN*SSLRNRTASLLSSL
Trigger: TAGAGATGACAAGAGAGAGGCAGTCCTATTTCTGAGACTGGACCAATTAAAATGACTGCACTGGCTCAAAGGACTCTGAACCTGTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR TCA 90 bp AGATATAGGACGCAGAGTGCAAGCTTTATGTACTACAGTGAGTTTTaGCAAACCAACCATTTCGTGTGTGTGTGTGTGTATGTGTGCAAG +
Preference number: 1 (lower is better)
Translates to: RYRTQSASFMYYSEF*QTNHFVCVCVYVCK
Trigger: CTTGCACACATACACACACACACACACGAAATGGTTGGTTTGTCAAAACTCACTGTAGTACATAAAGCTTGCACTCTGCGTCCTATATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR TCA 90 bp GAACCTATTTTTGAAATGCTCTTAGTAAACTCAAGCGAGTTTCATTaGGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCT +
Preference number: 1 (lower is better)
Translates to: EPIFEMLLVNSSEFH*EKSLRAVLCRSWHP
Trigger: AGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTTACTAAGAGCATTTCAAAAATAGGTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR GCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTA +
Preference number: 1 (lower is better)
Translates to: GYNLVSVYEVLRFHW*KSTRRVKLCNFKKL
Trigger: TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 90 bp AATGGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAG +
Preference number: 1 (lower is better)
Translates to: NGYNLVSVYEVLRFH*CKSTRRVKLCNFKK
Trigger: CTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 2 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR TCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 2 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRSLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 2 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGGTCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: GSMRAGGQARGSSAKATSGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...AGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR GCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 2 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: GGQARGSSAKATSPGCGWPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCACCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: SMRAGGQARGSSAKATSPPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: GGQARGSSAKATSPGCGWGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 2 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGSLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 2 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR GCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 2 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR TCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGTGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: GGQARGSSAKATSPGCGWWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGTCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 2 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRSMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR GCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 2 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 2 (lower is better)
Translates to: SMRAGGQARGSSAKATSPRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 2 (lower is better)
Translates to: MRAGGQARGSSAKATSPGSMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR CAA 90 bp TGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTaGGGAAAACCGCTCACTCCCGTAAGCCCCCAGTGGAGATCCCGC +
Preference number: 2 (lower is better)
Translates to: CMAGPCLGGSQEGLV*GKPLTPVSPQWRSR
Trigger: GCGGGATCTCCACTGGGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 2 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCTTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 2 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GAGTGGGCTAGGGGAGTGAGGGTTCCGAGAAGGCCCAGGCAAGAACTGCCTGCAAGATCCTGGCATCCTTaGGCCGGATGGCCGTTAGTG +
Preference number: 2 (lower is better)
Translates to: EWARGVRVPRRPRQELPARSWHP*AGWPLV
Trigger: CACTAACGGCCATCCGGCCCAAGGATGCCAGGATCT...TGCAGGCAGTTCTTGCCTGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CAA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCA +
Preference number: 2 (lower is better)
Translates to: VSVVRLIPLSMALLF*LRDDGGLEFCLSAA
Trigger: TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 2 (lower is better)
Translates to: WVPGWMGARKAGGSGVHESRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR TCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 2 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 2 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CAA 90 bp TCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTaGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGG +
Preference number: 2 (lower is better)
Translates to: SSIWFPIVARCCLGE*GAWMDGCPESGWQR
Trigger: CCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CAA 90 bp GGGACAGATGGCGGGTCCACCCCAACACAACCAAGGTGGGTGACTTaGGTTCCCAAGCTGAGATTGAGTGGGGGCCTGGTGACCTCTCAT +
Preference number: 2 (lower is better)
Translates to: GTDGGSTPTQPRWVT*VPKLRLSGGLVTSH
Trigger: ATGAGAGGTCACCAGGCCCCCACTCAATCTCAGCTTGGGAACCAAAGTCACCCACCTTGGTTGTGTTGGGGTGGACCCGCCATCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CAA 90 bp TCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCATCT +
Preference number: 2 (lower is better)
Translates to: SVVRLIPLSMALLFL*RDDGGLEFCLSAAS
Trigger: AGATGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp GAGTGGGCTAGGGGAGTGAGGGTTCCGAGAAGGCCCAGGCAAGAACTGCCTGCAGAGGTCACGGACACATaGCTGATCAAAGAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: EWARGVRVPRRPRQELPAEVTDT*LIKEVG
Trigger: CCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTC...TGCAGGCAGTTCTTGCCTGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGGACAAGGGGCCATGGTaGGGGGTTGGCGGGAGCAAT +
Preference number: 2 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERDKGPW*GVGGSN
Trigger: ATTGCTCCCGCCAACCCCTCACCATGGCCCCTTGTC...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR GCA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 2 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR GCA 90 bp GAGTGGGCTAGGGGAGTGAGGGTTCCGAGAAGGCCCAGGCAAGAACTGCCTGCAGTGAGAGTGAGGGGGTaGATGTGTGCAAGCATCCTT +
Preference number: 2 (lower is better)
Translates to: EWARGVRVPRRPRQELPAVRVRG*MCASIL
Trigger: AAGGATGCTTGCACACATGCACCCCCTCACTCTCAC...TGCAGGCAGTTCTTGCCTGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 2 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TCGATGGCGCTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: SMALLFLLRDDGGLEFCLSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 2 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 2 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GAGTGGGCTAGGGGAGTGAGGGTTCCGAGAAGGCCCAGGCAAGAACTGCCTGCAGAATGGGACAGGGGGTaGAGGACTGGGCACAATTTA +
Preference number: 2 (lower is better)
Translates to: EWARGVRVPRRPRQELPAEWDRG*RTGHNL
Trigger: TAAATTGTGCCCAGTCCTCCACCCCCTGTCCCATTC...TGCAGGCAGTTCTTGCCTGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp TCGATGGCGCTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 2 (lower is better)
Translates to: SMALLFLLRDDGGLEFCLSLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 2 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR GCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTCTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 2 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 2 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: WVPGWMGARKAGGSGVHECGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTTGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 2 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 2 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTAGATCCTGGCATCCTTaGGCCGGATGGCCGTTAGTG +
Preference number: 2 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSRSWHP*AGWPLV
Trigger: CACTAACGGCCATCCGGCCCAAGGATGCCAGGATCT...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp ATTCTGCAGCGCCAGGAGTCACTGAACGGGCTCCCTGCCCTTCCCTCATCTGTTTGTGGAAGAGTTCTCTaGGCCTGGAGAAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: ILQRQESLNGLPALPSSVCGRVL*AWRREG
Trigger: CCCTTCCCTTCTCCAGGCCCAGAGAACTCTTCCACA...AACAGATGAGGGAAGGGCAGGGAGCCCGTTCAGTGACTCCTGGCGCTGCAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp CCCCGAGAGGAAAGGTCCAGGAGGGAGAGCACCACAGGCATTACAAAACAGACTGCAGCTTACGGAAGCTaGAGGCGGCACCATTCCCTC +
Preference number: 2 (lower is better)
Translates to: PREERSRRESTTGITKQTAAYGS*RRHHSL
Trigger: GAGGGAATGGTGCCGCCTCCAGCTTCCGTAAGCTGC...AGTCTGTTTTGTAATGCCTGTGGTGCTCTCCCTCCTGGACCTTTCCTCTCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CAA 90 bp TTGCTTGTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGC +
Preference number: 2 (lower is better)
Translates to: LLVSVVRLIPLSMAL*FLLRDDGGLEFCLS
Trigger: GCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACACAAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCTTCACTCTCTCTTGCTaGACTCTGTGTCCAGGGTTC +
Preference number: 2 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPFTLSC*TLCPGF
Trigger: GAACCCTGGACACAGAGTTCAGCAAGAGAGAGTGAA...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGTGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 2 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWCRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR GCA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 2 (lower is better)
Translates to: QDATQGKCLLGRAVFIASWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 2 (lower is better)
Translates to: NIQDATQGKCLLGRAVFIGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMASWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: SSNSIAARERVCGWKRWFPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCAGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCAGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 2 (lower is better)
Translates to: EVSVGPSCFYSISATSVLMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GAGTGGGCTAGGGGAGTGAGGGTTCCGAGAAGGCCCAGGCAAGAACTGCCTGCATTAAACCCCTCAGGATaGCAACTCGGTAGCATTTGG +
Preference number: 2 (lower is better)
Translates to: EWARGVRVPRRPRQELPALNPSG*QLGSIW
Trigger: CCAAATGCTACCGAGTTGCCATCCTGAGGGGTTTAA...TGCAGGCAGTTCTTGCCTGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGGTGCTTTGCAGATCCTaGCATCCTTGGGCCGGATGG +
Preference number: 2 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWVLCRS*HPWAGW
Trigger: CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCAC...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 2 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR TCA 90 bp CCCCGAGAGGAAAGGTCCAGGAGGGAGAGCACCACAGGCATTACAAAACAGACTGCTCACCTCCAAAGATaGGTGATTCTGCAGCGCCAG +
Preference number: 2 (lower is better)
Translates to: PREERSRRESTTGITKQTAHLQR*VILQRQ
Trigger: CTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGC...AGTCTGTTTTGTAATGCCTGTGGTGCTCTCCCTCCTGGACCTTTCCTCTCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 2 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACCGCTGTTGTTCTTGTTaGGGGATGACGGCGGGCTCG +
Preference number: 2 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYRCCSC*GMTAGS
Trigger: CGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCG...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR TCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTTGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 2 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTCRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR GCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: ALQILASLGRMAVSVANPIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 2 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 2 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 2 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 2 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTCAACTCGGTAGCATTTaGCTTCTGCCTGAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: DALLKVLLPGGFCQVGWAQLGSI*LLPEPL
Trigger: GAGAGGCTCAGGCAGAAGCCAAATGCTACCGAGTTG...AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGGCAGCTTACGGAAGCTaGAGGCGGCACCATTCCCTC +
Preference number: 2 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVAAYGS*RRHHSL
Trigger: GAGGGAATGGTGCCGCCTCCAGCTTCCGTAAGCTGC...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CAA 90 bp GAGCCTCTAATGGTGGGATTTTGGACACAATGGCAGGAGAGAGATTaGGGTGGGAGGCTTGTCAGAATGCACCAGGTTGGCAGCCTCCTG +
Preference number: 2 (lower is better)
Translates to: EPLMVGFWTQWQERD*GGRLVRMHQVGSLL
Trigger: CAGGAGGCTGCCAACCTGGTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAATCCCACCATTAGAGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGGTAGGCCCTCCCAGTTaGCTATGGCTCTTTTCCCGA +
Preference number: 2 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWVGPPS*LWLFSR
Trigger: TCGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTAC...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTGTAGGCCCTCCCAGTTaGCTATGGCTCTTTTCCCGA +
Preference number: 2 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMAVGPPS*LWLFSR
Trigger: TCGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTAC...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCCAGGTGATGCGCTCTTaGAGGTCCTCCTTCCAGGAG +
Preference number: 2 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGQVMRS*RSSFQE
Trigger: CTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTG...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGGAGGTCACGGACACATaGCTGATCAAAGAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: LCSPPKMSDSAAPGVTEREVTDT*LIKEVG
Trigger: CCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTC...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 2 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR TCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 2 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR GCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCACAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAAQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 2 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGTGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCAGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: CVQASFIPDKRRPTLMLAGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 2 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCTTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 2 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCAGATCCTGGCATCCTTaGGCCGGATGGCCGTTAGTG +
Preference number: 2 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGRSWHP*AGWPLV
Trigger: CACTAACGGCCATCCGGCCCAAGGATGCCAGGATCT...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTGAGGCGGAAAGTGTTTaGTTTTCCTCGAAGCATGGG +
Preference number: 2 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFEAESV*FSSKHG
Trigger: CCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTC...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTGAGGATTTTGCCAGGTaGGATGGGCTGACTTTGAAC +
Preference number: 2 (lower is better)
Translates to: DALLKVLLPGGFCQVGWAEDFAR*DGLTLN
Trigger: GTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTC...AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCGGCTGGTCACCCCTTTaGTTATGCAGTTCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSGWSPL*LCSSSP
Trigger: AGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCC...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTCTTGTAGGAGAGCAGTaGGCTGGCTTTGGTGGCGTT +
Preference number: 2 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMALVGEQ*AGFGGV
Trigger: AACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAG...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGGTGGCTTCCAACAACTaGAGGACCCAGGACAAGACA +
Preference number: 2 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERVASNN*RTQDKT
Trigger: TGTCTTGTCCTGGGTCCTCCAGTTGTTGGAAGCCAC...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTTCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 2 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFSPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR CAA 90 bp TTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTaGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTC +
Preference number: 2 (lower is better)
Translates to: LREKSSSSALQILAS*GRMAVSVANPGSLL
Trigger: GAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: NIQDATQGKCLLGRAVFIGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR GCA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMAIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 2 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAACAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: QASFIPDKRRPTLMLAFFPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...GAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGTGCTTTGCAGATCCTaGCATCCTTGGGCCGGATGG +
Preference number: 2 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMVLCRS*HPWAGW
Trigger: CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCAC...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTTGTGGAAGAGTTCTCTaGGCCTGGAGAAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTCGRVL*AWRREG
Trigger: CCCTTCCCTTCTCCAGGCCCAGAGAACTCTTCCACA...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCGGCTCTTTTCCCGAGTaGCTCTCATCTTGTTTGTGG +
Preference number: 2 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSGSFPE*LSSCLW
Trigger: CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCC...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AAAGCTCCGCCTGAGTTGCAAGAAGGAAACTCCTCAGAGCTCTCTCTGCTCACCGTGGGCTGGCTTTGGTaGCGTTTGTACTGGAATCCA +
Preference number: 2 (lower is better)
Translates to: KAPPELQEGNSSELSLLTVGWLW*RLYWNP
Trigger: TGGATTCCAGTACAAACGCCACCAAAGCCAGCCCAC...GGTGAGCAGAGAGAGCTCTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGGTGGGCTGGCTTTGGTaGCGTTTGTACTGGAATCCA +
Preference number: 2 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWVGWLW*RLYWNP
Trigger: TGGATTCCAGTACAAACGCCACCAAAGCCAGCCCAC...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCTCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 2 (lower is better)
Translates to: SLREKSSSSALQILASLGSPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR CAA 90 bp TCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTaGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTT +
Preference number: 2 (lower is better)
Translates to: SFLPCRRAVGWLWWR*YWNPISTSEGWSPL
Trigger: AAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CAA 90 bp GGAGCAATGGAGGCTGCTCCTGAGTTAAAGAAAGCTCCGCCTGAGTaGCAAGAAGGAAACTCCTCAGAGCTCTCTCTGCTCACCTCCAAA +
Preference number: 2 (lower is better)
Translates to: GAMEAAPELKKAPPE*QEGNSSELSLLTSK
Trigger: TTTGGAGGTGAGCAGAGAGAGCTCTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTTTCTTTAACTCAGGAGCAGCCTCCATTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp TTTTGGACACAATGGCAGGAGAGAGATTTGGGTGGGAGGCTTGTCAGAATGCACCATTTGGCTTCTGCCTaGGCCTCTCACGGTAGTGAC +
Preference number: 2 (lower is better)
Translates to: FWTQWQERDLGGRLVRMHHLASA*ASHGSD
Trigger: GTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATG...GTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGCATTTGGCTTCTGCCTaGGCCTCTCACGGTAGTGAC +
Preference number: 2 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMHLASA*ASHGSD
Trigger: GTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATG...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTCCAATAAGCACATCTaGGGGCTGGTCACCCCTTTG +
Preference number: 2 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYSNKHI*GLVTPL
Trigger: CAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGA...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp ATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGCCTCCTGGCTCCGAATaGACATGGAGCATGGTGTGC +
Preference number: 2 (lower is better)
Translates to: ICHLLLEPLSRGQKRSYVPPGSE*TWSMVC
Trigger: GCACACCATGCTCCATGTTCATTCGGAGCCAGGAGG...CACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCGCTGTTGTTCTTGTTaGGGGATGACGGCGGGCTCG +
Preference number: 2 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVRCCSC*GMTAGS
Trigger: CGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCG...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp GGAGGCGGCACCATTCCCTCGCTACTCTATTATAAAATATGTGCACACAAGAGTTGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 2 (lower is better)
Translates to: GGGTIPSLLYYKICAHKSCRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...ACTCTTGTGTGCACATATTTTATAATAGAGTAGCGAGGGAATGGTGCCGCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460129.5
3UTR-3UTR TCA 90 bp TTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCTGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 2 (lower is better)
Translates to: FCKRGGKCLVFLEAWDIICRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...GATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR GCA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAAGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR GCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGAGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTGAGGGGGTGCATGTGTaGAAGCATCCTTCATTCCTG +
Preference number: 2 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTEGVHV*KHPSFL
Trigger: CAGGAATGAAGGATGCTTGCACACATGCACCCCCTC...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 2 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 2 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: SIQLRPCCASISKTHRPVGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 2 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 2 (lower is better)
Translates to: DALLKVLLPGGFCQVGWAVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGCAACTCGGTAGCATTTaGCTTCTGCCTGAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPQLGSI*LLPEPL
Trigger: GAGAGGCTCAGGCAGAAGCCAAATGCTACCGAGTTG...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTCATCCTTGGGCCGGATaGCCGTTAGTGTTGCAAACC +
Preference number: 2 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTHPWAG*PLVLQT
Trigger: GGTTTGCAACACTAACGGCCATCCGGCCCAAGGATG...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTAGTGCTTTGCAGATCCTaGCATCCTTGGGCCGGATGG +
Preference number: 2 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLVLCRS*HPWAGW
Trigger: CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCAC...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGGGTCAGCATGAGGAATaGATTTTGCAAGAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWGQHEE*ILQERR
Trigger: CCGCCTCTCTTGCAAAATCCATTCCTCATGCTGACC...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CCCCGAGAGGAAAGGTCCAGGAGGGAGAGCACCACAGGCATTACAAAACAGACTAGAAGTGCAGACAACTaGGCCACACATTCTTTCCCA +
Preference number: 2 (lower is better)
Translates to: PREERSRRESTTGITKQTRSADN*ATHSFP
Trigger: TGGGAAAGAATGTGTGGCCCAGTTGTCTGCACTTCT...AGTCTGTTTTGTAATGCCTGTGGTGCTCTCCCTCCTGGACCTTTCCTCTCGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CAA 90 bp TGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGATGGGT +
Preference number: 2 (lower is better)
Translates to: WVETLVFSPVFGFRL*LVAAWVSWVPGWMG
Trigger: ACCCATCCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CAA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGATG +
Preference number: 2 (lower is better)
Translates to: LWVETLVFSPVFGFR*LLVAAWVSWVPGWM
Trigger: CATCCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CAA 90 bp AACCCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTaGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGA +
Preference number: 2 (lower is better)
Translates to: NPQVFPPPSRCRPSQ*TMALFPSGSHLVCG
Trigger: TCCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CAA 90 bp GTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTaGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCACT +
Preference number: 2 (lower is better)
Translates to: VQASFIPDKRRPTLM*AFFHRSLFPKPGST
Trigger: AGTGGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTTCACGACATTCAGGTaGTGCGCTCTTGAAGGTCCT +
Preference number: 2 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYFTTFR*CALEGP
Trigger: AGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAA...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGGAGGTCACGGACACATaGCTGATCAAAGAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMEVTDT*LIKEVG
Trigger: CCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTC...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGCTTGGTTTGGAACTTTaGAAAGGCCTGGGGACTTCC +
Preference number: 2 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVLGLEL*KGLGTS
Trigger: GGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAG...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 2 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR GCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: SSNSIAARERVCGWKRWFIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 2 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 2 (lower is better)
Translates to: NSIAARERVCGWKRWFSLGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 2 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAATTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 2 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTACATCCTTGGGCCGGATaGCCGTTAGTGTTGCAAACC +
Preference number: 2 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLHPWAG*PLVLQT
Trigger: GGTTTGCAACACTAACGGCCATCCGGCCCAAGGATG...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGTGCTTTGCAGATCCTaGCATCCTTGGGCCGGATGG +
Preference number: 2 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLVLCRS*HPWAGW
Trigger: CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCAC...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTGAATGGCTTTCTGTTTaGGAAAGCAAGACTTGCTGT +
Preference number: 2 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFEWLSV*ESKTCC
Trigger: ACAGCAAGTCTTGCTTTCCCAAACAGAAAGCCATTC...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGGTTTTCCTCGAAGCATaGGACATCATCGATCATGGT +
Preference number: 2 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERVFLEA*DIIDHG
Trigger: ACCATGATCGATGATGTCCCATGCTTCGAGGAAAAC...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTTGTGGAAGAGTTCTCTaGGCCTGGAGAAGGGAAGGG +
Preference number: 2 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSCGRVL*AWRREG
Trigger: CCCTTCCCTTCTCCAGGCCCAGAGAACTCTTCCACA...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGGCTGGTCACCCCTTTaGTTATGCAGTTCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: QGCPMFYTCRSFLPCRRAGWSPL*LCSSSP
Trigger: AGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCC...TGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGCAGTGGGCTGGCTTTaGTGGCGTTTGTACTGGAAT +
Preference number: 2 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMAVGWL*WRLYWN
Trigger: ATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGC...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTGCTATCCTGATGTCATaGAACGAGGTCACGGACACA +
Preference number: 2 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTAILMS*NEVTDT
Trigger: TGTGTCCGTGACCTCGTTCCATGACATCAGGATAGC...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCAACTGAGAACCCCTCCTaGCTCCGAATGAACATGGAG +
Preference number: 2 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSTENPS*LRMNME
Trigger: CTCCATGTTCATTCGGAGCCAGGAGGGGTTCTCAGT...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 2 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSSPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 2 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCSPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR CAA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTaGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCA +
Preference number: 2 (lower is better)
Translates to: KLKRVSLREKSSSSA*QILASLGRMAVSVA
Trigger: TGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CAA 90 bp GATACATTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTaGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCT +
Preference number: 2 (lower is better)
Translates to: DTFRDTSSRHSGDAL*KVLLPGGFCQVGWA
Trigger: AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAATGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 2 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR TCA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 2 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 2 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR TCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATCATTTGGCTTCTGCCTaGGCCTCTCACGGTAGTGAC +
Preference number: 2 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNHLASA*ASHGSD
Trigger: GTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATG...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGTTCACGACATTCAGGTaGTGCGCTCTTGAAGGTCCT +
Preference number: 2 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMFTTFR*CALEGP
Trigger: AGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAA...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTTCCAATAAGCACATCTaGGGGCTGGTCACCCCTTTG +
Preference number: 2 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSSNKHI*GLVTPL
Trigger: CAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGA...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTCCAATAAGCACATCTaGGGGCTGGTCACCCCTTTG +
Preference number: 2 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLSNKHI*GLVTPL
Trigger: CAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGA...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCCAAACACAGCTATCCTaGTGTCATGGAACGAGGTCA +
Preference number: 2 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGQTQLS*CHGTRS
Trigger: TGACCTCGTTCCATGACATCAGGATAGCTGTGTTTG...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACCAAACACAGCTATCCTaGTGTCATGGAACGAGGTCA +
Preference number: 2 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYQTQLS*CHGTRS
Trigger: TGACCTCGTTCCATGACATCAGGATAGCTGTGTTTG...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTCACTCTCTCTTGCTaGACTCTGTGTCCAGGGTTC +
Preference number: 2 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWFTLSC*TLCPGF
Trigger: GAACCCTGGACACAGAGTTCAGCAAGAGAGAGTGAA...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 2 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp CGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 2 (lower is better)
Translates to: RKVFGFPRSMGHHRSWYSGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...TGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR TCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 2 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR GCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 2 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp CAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 2 (lower is better)
Translates to: QGCPMFYTCRSFLPCRRAGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...TGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 2 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAATGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 2 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 2 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp CTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: LCRSWHPWAGWPLVLQTQRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...CTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCCTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 2 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp CTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGGAAACAAGGCAACATaGCGGCAAAGAAACTTTATA +
Preference number: 2 (lower is better)
Translates to: LCRSWHPWAGWPLVLQTQGNKAT*RQRNFI
Trigger: TATAAAGTTTCTTTGCCGGCATGTTGCCTTGTTTCC...CTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCAAAGTCTTCGAGCAGTaGTTTGCAGATCCTGGCATC +
Preference number: 2 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGKVFEQ*FADPGI
Trigger: GATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTT...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTGATCCTCATCCAATATaGCAACAGCTCAGATGCTGC +
Preference number: 2 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTDPHPI*QQLRCC
Trigger: GCAGCATCTGAGCTGTTGGCATATTGGATGAGGATC...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp TTTTGGACACAATGGCAGGAGAGAGATTTGGGTGGGAGGCTTGTCAGAATGCACCCTAATGGAGTGAACTaGCAAACGTACCCCATGCTG +
Preference number: 2 (lower is better)
Translates to: FWTQWQERDLGGRLVRMHPNGVN*QTYPML
Trigger: CAGCATGGGGTACGTTTGGCAGTTCACTCCATTAGG...GTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR GCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGATTTCAGAACCACACTaGACGAGTCAGAAGAGCCAG +
Preference number: 2 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVISEPH*TSQKSQ
Trigger: CTGGCTCTTCTGACTCGTGCAGTGTGGTTCTGAAAT...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR GCA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 2 (lower is better)
Translates to: KLKRVSLREKSSSSALQIGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR GCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGAGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 2 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 2 (lower is better)
Translates to: CASISKTHRPVDWINSLRGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGAGGCGGCACCATTCCCTCGCTACTCTATTATAAAATATGTGCACACAAGAGTTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: GGGTIPSLLYYKICAHKSLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...ACTCTTGTGTGCACATATTTTATAATAGAGTAGCGAGGGAATGGTGCCGCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 2 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 2 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGATTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 2 (lower is better)
Translates to: CASISKTHRPVDWINSLRFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCAGAGGCGGAAAGTGTTTaGTTTTCCTCGAAGCATGGG +
Preference number: 2 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSEAESV*FSSKHG
Trigger: CCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTC...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAAGAGGATTTTGCCAGGTaGGATGGGCTGACTTTGAAC +
Preference number: 2 (lower is better)
Translates to: FSRVALILFVEEFSGPGEEDFAR*DGLTLN
Trigger: GTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTC...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTAGCACATCTGAGGGCTaGTCACCCCTTTGGTTATGC +
Preference number: 2 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLSTSEG*SPLWLC
Trigger: GCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCT...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGTGGGCTGGCTTTGGTaGCGTTTGTACTGGAATCCA +
Preference number: 2 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGVGWLW*RLYWNP
Trigger: TGGATTCCAGTACAAACGCCACCAAAGCCAGCCCAC...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTAGTGGGCTGGCTTTGGTaGCGTTTGTACTGGAATCCA +
Preference number: 2 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLVGWLW*RLYWNP
Trigger: TGGATTCCAGTACAAACGCCACCAAAGCCAGCCCAC...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AGGAGAGCTTGGTTTGGAACTTTGAAAAGGCCTGGGGACTTCCTGCTATTGTCTTCTGCCACTTACTCCTaGAGCCCTTGTCTAGAGGAC +
Preference number: 2 (lower is better)
Translates to: RRAWFGTLKRPGDFLLLSSATYS*SPCLED
Trigger: GTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGA...AGACAATAGCAGGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAGCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 2 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 2 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVSMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTTCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 2 (lower is better)
Translates to: VETLVFSPVFGFRLLLVASPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR CAA 90 bp GAGCTTAGCTCTCAGAACCAAATCTGCCACTTACTCCTGGAGCCCTaGTCTAGAGGACAGAAAAGAAGCTATGTGGATGATGCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: ELSSQNQICHLLLEP*SRGQKRSYVDDAVP
Trigger: TGGGACTGCATCATCCACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCTGAGAGCTAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CAA 90 bp CCTTCACGACGCGGATCCGGCTTCAAGGAAGCCAAGAGTCTGGGATaGATTCACATTCATTTCAGGCTCAAGGTTAAAGACTCACAACCT +
Preference number: 2 (lower is better)
Translates to: PSRRGSGFKEAKSLG*IHIHFRLKVKDSQP
Trigger: AGGTTGTGAGTCTTTAACCTTGAGCCTGAAATGAATGTGAATCAATCCCAGACTCTTGGCTTCCTTGAAGCCGGATCCGCGTCGTGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460129.5
3UTR-3UTR TCA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 2 (lower is better)
Translates to: KLKRVSLREKSSSSALQISLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGCCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 2 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 2 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR TCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACATGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 2 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTCRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR TCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTTGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 2 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSCRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR GCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGATGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 2 (lower is better)
Translates to: CASISKTHRPVDWINSLRWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 2 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 2 (lower is better)
Translates to: ALQILASLGRMAVSVANPIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCAAAAGTCTTCGAGCAGTaGTTTGCAGATCCTGGCATC +
Preference number: 2 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSKVFEQ*FADPGI
Trigger: GATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTT...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCATCTCTGTACAGACAGTaGCAAAGAGAACCTATTTTT +
Preference number: 2 (lower is better)
Translates to: ALQILASLGRMAVSVANPSLYRQ*QREPIF
Trigger: AAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGA...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp AGAACCAAATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGAGGGGGTGCATGTGTaGAAGCATCCTTCATTCCTG +
Preference number: 2 (lower is better)
Translates to: RTKSATYSWSPCLEDRKEEGVHV*KHPSFL
Trigger: CAGGAATGAAGGATGCTTGCACACATGCACCCCCTC...TTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR GCA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGTGAGAGTGAGGGGGTaGATGTGTGCAAGCATCCTT +
Preference number: 2 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLVRVRG*MCASIL
Trigger: AAGGATGCTTGCACACATGCACCCCCTCACTCTCAC...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAAGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: VMERGHGHMTDQRSGEMEERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 2 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 2 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: ASISKTHRPVDWINSLRKGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 2 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAATTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 2 (lower is better)
Translates to: ASISKTHRPVDWINSLRKFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCCAACTCGGTAGCATTTaGCTTCTGCCTGAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: FCKRGGKCLVFLEAWDIIQLGSI*LLPEPL
Trigger: GAGAGGCTCAGGCAGAAGCCAAATGCTACCGAGTTG...GATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGTTAAACCCCTCAGGATaGCAACTCGGTAGCATTTGG +
Preference number: 2 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMLNPSG*QLGSIW
Trigger: CCAAATGCTACCGAGTTGCCATCCTGAGGGGTTTAA...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AGGAGAGCTTGGTTTGGAACTTTGAAAAGGCCTGGGGACTTCCTGCTATTGTCTGGTCAGCATGAGGAATaGATTTTGCAAGAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: RRAWFGTLKRPGDFLLLSGQHEE*ILQERR
Trigger: CCGCCTCTCTTGCAAAATCCATTCCTCATGCTGACC...AGACAATAGCAGGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAGCTCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCAGTGGGCTGGCTTTaGTGGCGTTTGTACTGGAAT +
Preference number: 2 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLAVGWL*WRLYWN
Trigger: ATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGC...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 2 (lower is better)
Translates to: QASFIPDKRRPTLMLAFFRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...GAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR CCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATTCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 2 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNSMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR TCA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 2 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGCCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 2 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 2 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR GCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp TTTAAACCACAAACATTTCAGAACCACACTGCACGAGTCAGAAGAGCCAGCGATCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: FKPQTFQNHTARVRRASDPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...ATCGCTGGCTCTTCTGACTCGTGCAGTGTGGTTCTGAAATGTTTGTGGTTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR GCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACCTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 2 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACACCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 2 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAAGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 2 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 2 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTTAAACCCCTCAGGATaGCAACTCGGTAGCATTTGG +
Preference number: 2 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLLNPSG*QLGSIW
Trigger: CCAAATGCTACCGAGTTGCCATCCTGAGGGGTTTAA...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTGAATGGCTTTCTGTTTaGGAAAGCAAGACTTGCTGT +
Preference number: 2 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTEWLSV*ESKTCC
Trigger: ACAGCAAGTCTTGCTTTCCCAAACAGAAAGCCATTC...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTGAGGCGGAAAGTGTTTaGTTTTCCTCGAAGCATGGG +
Preference number: 2 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLEAESV*FSSKHG
Trigger: CCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTC...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 2 (lower is better)
Translates to: SIQLRPCCASISKTHRPVRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 2 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR TCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 2 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR TCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 2 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR TCA 90 bp AAAGCTCCGCCTGAGTTGCAAGAAGGAAACTCCTCAGAGCTCTCTCTGCTCACCATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: KAPPELQEGNSSELSLLTMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...GGTGAGCAGAGAGAGCTCTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACACCTTTTCTCACCTGTaGTACTGTAGGGTTTCAGAA +
Preference number: 2 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHTFSHL*YCRVSE
Trigger: TTCTGAAACCCTACAGTATCACAGGTGAGAAAAGGT...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 2 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR GCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACATGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 2 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 2 (lower is better)
Translates to: QDATQGKCLLGRAVFIASTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGGGAAACAAGGCAACATaGCGGCAAAGAAACTTTATA +
Preference number: 2 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVGNKAT*RQRNFI
Trigger: TATAAAGTTTCTTTGCCGGCATGTTGCCTTGTTTCC...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR GCA 90 bp AGAACCAAATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAAAAGTCTTCGAGCAGTaGTTTGCAGATCCTGGCATC +
Preference number: 2 (lower is better)
Translates to: RTKSATYSWSPCLEDRKEKVFEQ*FADPGI
Trigger: GATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTT...TTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR GCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTGATCCTCATCCAATATaGCAACAGCTCAGATGCTGC +
Preference number: 2 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLDPHPI*QQLRCC
Trigger: GCAGCATCTGAGCTGTTGGCATATTGGATGAGGATC...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCACTGAGACCCACAAAGTaGTTAGCAGTTAAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: CVQASFIPDKRRPTLMLALRPTK*LAVKRL
Trigger: CAGCCTCTTAACTGCTAAGCACTTTGTGGGTCTCAG...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGCTGAGACCCACAAAGTaGTTAGCAGTTAAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: EEWILQERRKVFGFPRSMLRPTK*LAVKRL
Trigger: CAGCCTCTTAACTGCTAAGCACTTTGTGGGTCTCAG...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATATGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: NIQDATQGKCLLGRAVFICGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATTGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGATCTACCTATCTATATaGACGTATACAGTCTCGGAA +
Preference number: 2 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWIYLSI*TYTVSE
Trigger: TTCCGAGACTGTATACGTCCATATAGATAGGTAGAT...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAAGATCCTGGCATCCTTaGGCCGGATGGCCGTTAGTG +
Preference number: 2 (lower is better)
Translates to: STLPQSLYRQCQREPIFERSWHP*AGWPLV
Trigger: CACTAACGGCCATCCGGCCCAAGGATGCCAGGATCT...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAAGAATGGCTTTCTGTTTaGGAAAGCAAGACTTGCTGT +
Preference number: 2 (lower is better)
Translates to: FSRVALILFVEEFSGPGEEWLSV*ESKTCC
Trigger: ACAGCAAGTCTTGCTTTCCCAAACAGAAAGCCATTC...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTAGTTTTCCTCGAAGCATaGGACATCATCGATCATGGT +
Preference number: 2 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLVFLEA*DIIDHG
Trigger: ACCATGATCGATGATGTCCCATGCTTCGAGGAAAAC...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGTGGTGGCGTTTGTACTaGAATCCAATAAGCACATCT +
Preference number: 2 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMWWRLY*NPISTS
Trigger: AGATGTGCTTATTGGATTCCAGTACAAACGCCACCA...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CAA 90 bp AGGGTCAGCATGAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTaGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAA +
Preference number: 2 (lower is better)
Translates to: RVSMRNGFCKRGGKC*VFLEAWDIIDHGIQ
Trigger: TTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTCATGCTGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp GTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGATCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 2 (lower is better)
Translates to: VFIASQPPVFLNHTNSQRSLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...TCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 2 (lower is better)
Translates to: VETLVFSPVFGFRLLLVASRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR TCA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 2 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATCAAGCGAGTTTCATTaGGAGAAAAGTCTTCGAGCA +
Preference number: 2 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLSSEFH*EKSLRA
Trigger: TGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGA...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGTTCACTCTCTCTTGCTaGACTCTGTGTCCAGGGTTC +
Preference number: 2 (lower is better)
Translates to: SIQLRPCCASISKTHRPVFTLSC*TLCPGF
Trigger: GAACCCTGGACACAGAGTTCAGCAAGAGAGAGTGAA...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR TCA 90 bp AGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATCCAGGATGCAACCCAGGATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 2 (lower is better)
Translates to: SRQKSEHGYHKTSRMQPRIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...CCTGGGTTGCATCCTGGATGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR TCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 2 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR GCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 2 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATACAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: LRPCCASISKTHRPVDWIQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAATGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGCACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTCACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 2 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAAGATCCTGGCATCCTTaGGCCGGATGGCCGTTAGTG +
Preference number: 2 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLRSWHP*AGWPLV
Trigger: CACTAACGGCCATCCGGCCCAAGGATGCCAGGATCT...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTGAATGGCTTTCTGTTTaGGAAAGCAAGACTTGCTGT +
Preference number: 2 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSEWLSV*ESKTCC
Trigger: ACAGCAAGTCTTGCTTTCCCAAACAGAAAGCCATTC...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCAGTTTTCCTCGAAGCATaGGACATCATCGATCATGGT +
Preference number: 2 (lower is better)
Translates to: CVQASFIPDKRRPTLMLAVFLEA*DIIDHG
Trigger: ACCATGATCGATGATGTCCCATGCTTCGAGGAAAAC...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GGAGGCGGCACCATTCCCTCGCTACTCTATTATAAAATATGTGCACACAAGAGTCTAATGGTGGGATTTTaGACACAATGGCAGGAGAGA +
Preference number: 2 (lower is better)
Translates to: GGGTIPSLLYYKICAHKSLMVGF*TQWQER
Trigger: TCTCTCCTGCCATTGTGTCCAAAATCCCACCATTAG...ACTCTTGTGTGCACATATTTTATAATAGAGTAGCGAGGGAATGGTGCCGCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAATCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 2 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKSPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR CAA 90 bp GGTAGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATaGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAA +
Preference number: 2 (lower is better)
Translates to: GSIWLLPEPLTVVTL*NGNSRQKSEHGYHK
Trigger: TTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTAATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 2 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp CAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 2 (lower is better)
Translates to: QASFIPDKRRPTLMLAFFPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...GAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATCAAGCGAGTTTCATTaGGAGAAAAGTCTTCGAGCA +
Preference number: 2 (lower is better)
Translates to: CVQASFIPDKRRPTLMLASSEFH*EKSLRA
Trigger: TGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGA...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp ATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGTACTACAGTGAGTTTTaGCAAACCAACCATTTCGTG +
Preference number: 2 (lower is better)
Translates to: ICHLLLEPLSRGQKRSYVYYSEF*QTNHFV
Trigger: CACGAAATGGTTGGTTTGTCAAAACTCACTGTAGTA...CACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTTTCACTCTCTCTTGCTaGACTCTGTGTCCAGGGTTC +
Preference number: 2 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCFTLSC*TLCPGF
Trigger: GAACCCTGGACACAGAGTTCAGCAAGAGAGAGTGAA...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
3UTR-3UTR GCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGACCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: CASISKTHRPVDWINSLRPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 2 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 2 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 2 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTGGAAACAAGGCAACATaGCGGCAAAGAAACTTTATA +
Preference number: 2 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSGNKAT*RQRNFI
Trigger: TATAAAGTTTCTTTGCCGGCATGTTGCCTTGTTTCC...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTAGGAAACAAGGCAACATaGCGGCAAAGAAACTTTATA +
Preference number: 2 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLGNKAT*RQRNFI
Trigger: TATAAAGTTTCTTTGCCGGCATGTTGCCTTGTTTCC...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGTCTCTGTACAGACAGTaGCAAAGAGAACCTATTTTT +
Preference number: 2 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMSLYRQ*QREPIF
Trigger: AAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGA...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp ACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGGATGATGTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: TYSWSPCLEDRKEAMWMMCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...CATCATCCACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: EEWILQERRKVFGFPRSMCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 2 (lower is better)
Translates to: CASISKTHRPVDWINSLRRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTATGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACATCTACCTATCTATATaGACGTATACAGTCTCGGAA +
Preference number: 2 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHIYLSI*TYTVSE
Trigger: TTCCGAGACTGTATACGTCCATATAGATAGGTAGAT...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGATCTACCTATCTATATaGACGTATACAGTCTCGGAA +
Preference number: 2 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMIYLSI*TYTVSE
Trigger: TTCCGAGACTGTATACGTCCATATAGATAGGTAGAT...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGTGTAGGGTTTCAGAATaGCTTTCTGTTTGGGAAAGC +
Preference number: 2 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLCRVSE*LSVWES
Trigger: GCTTTCCCAAACAGAAAGCCATTCTGAAACCCTACA...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAGGCTCTTTTCCCGAGTaGCTCTCATCTTGTTTGTGG +
Preference number: 2 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKGSFPE*LSSCLW
Trigger: CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCC...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACAGGCTCTTTTCCCGAGTaGCTCTCATCTTGTTTGTGG +
Preference number: 2 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTGSFPE*LSSCLW
Trigger: CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCC...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 2 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 2 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTAATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 2 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAACCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 2 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCAAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: CVQASFIPDKRRPTLMLARKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 2 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACATTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 2 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATATGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: LRPCCASISKTHRPVDWICGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: VETLVFSPVFGFRLLLVACGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 2 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AGGAGAGCTTGGTTTGGAACTTTGAAAAGGCCTGGGGACTTCCTGCTATTGTCTATCTACCTATCTATATaGACGTATACAGTCTCGGAA +
Preference number: 2 (lower is better)
Translates to: RRAWFGTLKRPGDFLLLSIYLSI*TYTVSE
Trigger: TTCCGAGACTGTATACGTCCATATAGATAGGTAGAT...AGACAATAGCAGGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAGCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAATCTACCTATCTATATaGACGTATACAGTCTCGGAA +
Preference number: 2 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGIYLSI*TYTVSE
Trigger: TTCCGAGACTGTATACGTCCATATAGATAGGTAGAT...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAACATCCTTGGGCCGGATaGCCGTTAGTGTTGCAAACC +
Preference number: 2 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKHPWAG*PLVLQT
Trigger: GGTTTGCAACACTAACGGCCATCCGGCCCAAGGATG...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AGAAGAGTGAAGGGACTCATCCCACCACATAATAAGACATTAGAAATTGACAATTCTGCCACTTACTCCTaGAGCCCTTGTCTAGAGGAC +
Preference number: 2 (lower is better)
Translates to: RRVKGLIPPHNKTLEIDNSATYS*SPCLED
Trigger: GTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGA...ATTGTCAATTTCTAATGTCTTATTATGTGGTGGGATGAGTCCCTTCACTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp AGGAGAGCTTGGTTTGGAACTTTGAAAAGGCCTGGGGACTTCCTGCTATTGTCTATAGTTAAAATTGTATaGCTGGTGCCAGATGAGACA +
Preference number: 2 (lower is better)
Translates to: RRAWFGTLKRPGDFLLLSIVKIV*LVPDET
Trigger: TGTCTCATCTGGCACCAGCCATACAATTTTAACTAT...AGACAATAGCAGGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAGCTCTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACACCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 2 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp GGAGGCGGCACCATTCCCTCGCTACTCTATTATAAAATATGTGCACACAAGAGTCTTTATGTACTACAGTaGGTTTTGACAAACCAACCA +
Preference number: 2 (lower is better)
Translates to: GGGTIPSLLYYKICAHKSLYVLQ*VLTNQP
Trigger: TGGTTGGTTTGTCAAAACTCACTGTAGTACATAAAG...ACTCTTGTGTGCACATATTTTATAATAGAGTAGCGAGGGAATGGTGCCGCCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 2 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR TCA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 2 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR GCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 2 (lower is better)
Translates to: LRPCCASISKTHRPVDWITETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGTCTCTGTACAGACAGTaGCAAAGAGAACCTATTTTT +
Preference number: 2 (lower is better)
Translates to: EEWILQERRKVFGFPRSMSLYRQ*QREPIF
Trigger: AAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGA...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTTCTCTGTACAGACAGTaGCAAAGAGAACCTATTTTT +
Preference number: 2 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLSLYRQ*QREPIF
Trigger: AAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGA...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: STLPQSLYRQCQREPIFEERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 2 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: KLKRVSLREKSSSSALQIRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAAGGAAACAAGGCAACATaGCGGCAAAGAAACTTTATA +
Preference number: 2 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKGNKAT*RQRNFI
Trigger: TATAAAGTTTCTTTGCCGGCATGTTGCCTTGTTTCC...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 2 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTGGACATCATCGATCATaGTATTCAAAATGTCTTTTG +
Preference number: 2 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLGHHRS*YSKCLL
Trigger: CAAAAGACATTTTGAATACCATGATCGATGATGTCC...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp AGAACCAAATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGGACATCATCGATCATaGTATTCAAAATGTCTTTTG +
Preference number: 2 (lower is better)
Translates to: RTKSATYSWSPCLEDRKEGHHRS*YSKCLL
Trigger: CAAAAGACATTTTGAATACCATGATCGATGATGTCC...TTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACATCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 2 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR TCA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 2 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAACCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 2 (lower is better)
Translates to: ASISKTHRPVDWINSLRKPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR TCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAAAGCAGCAAGCCATACTaGTCCTCATCCAATATGCCA +
Preference number: 2 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKSSKPY*SSSNMP
Trigger: TGGCATATTGGATGAGGATCAGTATGGCTTGCTGCT...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 2 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 2 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 2 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 2 (lower is better)
Translates to: ASISKTHRPVDWINSLRKVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CCA 90 bp TTTAAACCACAAACATTTCAGAACCACACTGCACGAGTCAGAAGAGCCAGCGATGGACATCATCGATCATaGTATTCAAAATGTCTTTTG +
Preference number: 2 (lower is better)
Translates to: FKPQTFQNHTARVRRASDGHHRS*YSKCLL
Trigger: CAAAAGACATTTTGAATACCATGATCGATGATGTCC...ATCGCTGGCTCTTCTGACTCGTGCAGTGTGGTTCTGAAATGTTTGTGGTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR TCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 2 (lower is better)
Translates to: CASISKTHRPVDWINSLRKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 2 (lower is better)
Translates to: STLPQSLYRQCQREPIFETETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATGGAAACAAGGCAACATaGCGGCAAAGAAACTTTATA +
Preference number: 2 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYGNKAT*RQRNFI
Trigger: TATAAAGTTTCTTTGCCGGCATGTTGCCTTGTTTCC...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGCACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR GCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 2 (lower is better)
Translates to: ASISKTHRPVDWINSLRKRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR GCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 2 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACAGGACATCATCGATCATaGTATTCAAAATGTCTTTTG +
Preference number: 2 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTGHHRS*YSKCLL
Trigger: CAAAAGACATTTTGAATACCATGATCGATGATGTCC...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR TCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 2 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR TCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 2 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACACACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 2 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 72 bp CATGCGGGGGACGTGGTGGCTGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGT +
Preference number: 3 (lower is better)
Translates to: HAGDVVAGRVHG*SMSGWEPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGCCACCACGTCCCCCGCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 72 bp CATTCATGCGGGGGACGTGGTGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGC +
Preference number: 3 (lower is better)
Translates to: HSCGGRGGWAGA*LVHVWVGARKG
Trigger: GCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGCCACCACGTCCCCCGCATGAATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 3 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR CCA 72 bp CACCAGGTTGGCAGCCTCCTGCAGGTAGCGCAAGAGTaGGCTAGGGGAGTGAGGGTTCCGAGAAGGCCCAGG +
Preference number: 3 (lower is better)
Translates to: HQVGSLLQVAQE*ARGVRVPRRPR
Trigger: CCTGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACTCTTGCGCTACCTGCAGGAGGCTGCCAACCTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR GCA 72 bp AGTACATTCATGCGGGGGACGTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAA +
Preference number: 3 (lower is better)
Translates to: STFMRGTWWLGG*MAGPCLGGSQE
Trigger: TTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGCCACCACGTCCCCCGCATGAATGTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGCTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 3 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CAA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 3 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 3 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 3 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR TCA 72 bp CCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTGCTTGAGCGCGGCATC +
Preference number: 3 (lower is better)
Translates to: PTVDGAVVLVEG*RRARVLLERGI
Trigger: GATGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGACAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CAA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp CTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 3 (lower is better)
Translates to: LCRSWHPWAGWPLVLQTQALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...CTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR CCA 72 bp TTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGT +
Preference number: 3 (lower is better)
Translates to: LKVYSTFMRGTW*LGGCMAGPCLG
Trigger: ACCCAGACATGGACCAGCCATGCACCCGCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 72 bp GGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATGGCTGGTCCATGTCTG +
Preference number: 3 (lower is better)
Translates to: GLKVYSTFMRGT*WLGGCMAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 3 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTTCAGGTGATGCGCTCTaGAAGGTCCTCCTTCCAGGA +
Preference number: 3 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFSGDAL*KVLLPG
Trigger: TCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGA...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 3 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR GCA 72 bp TTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCTTCCAGGTCGGTGTCA +
Preference number: 3 (lower is better)
Translates to: LFLLRDDGGLEF*LSAASSSRSVS
Trigger: TGACACCGACCTGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR CCA 72 bp CCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGATGGATGGGTGCCCGG +
Preference number: 3 (lower is better)
Translates to: PVFGFRLLLVAA*VSWVPGWMGAR
Trigger: CCGGGCACCCATCCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 72 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATaGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCT +
Preference number: 3 (lower is better)
Translates to: AVLCRSWHPWAG*PLVLQTQEAFS
Trigger: AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR TCA 72 bp AGCCAGGCTCCACTGAGAACCCCTCCTGGCTCCGAATaGACATGGAGCATGGTGTGCAAACACAGCTATCCT +
Preference number: 3 (lower is better)
Translates to: SQAPLRTPPGSE*TWSMVCKHSYP
Trigger: AGGATAGCTGTGTTTGCACACCATGCTCCATGTTCATTCGGAGCCAGGAGGGGTTCTCAGTGGAGCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR GCA 72 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTaGCAGGTGGGATGGGCTGACTTTGAACCCCAAACC +
Preference number: 3 (lower is better)
Translates to: DALLKVLLPGGF*QVGWADFEPQT
Trigger: GGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 72 bp AGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTaGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAA +
Preference number: 3 (lower is better)
Translates to: SLRAVLCRSWHP*AGWPLVLQTQE
Trigger: TTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 72 bp CTGTTCCCTAAGCCAGGCTCCACTGAGAACCCCTCCTaGCTCCGAATGAACATGGAGCATGGTGTGCAAACA +
Preference number: 3 (lower is better)
Translates to: LFPKPGSTENPS*LRMNMEHGVQT
Trigger: TGTTTGCACACCATGCTCCATGTTCATTCGGAGCCAGGAGGGGTTCTCAGTGGAGCCTGGCTTAGGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp CTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 3 (lower is better)
Translates to: LCRSWHPWAGWPLVLQTQFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...CTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp AAAGCTCCGCCTGAGTTGCAAGAAGGAAACTCCTCAGAGCTCTCTCTGCTCACCGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 3 (lower is better)
Translates to: KAPPELQEGNSSELSLLTGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...GGTGAGCAGAGAGAGCTCTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CAA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCAGATCCTGGCATCCTaGGGCCGGATGGCCGTTAGT +
Preference number: 3 (lower is better)
Translates to: SLREKSSSSALQILASLGQILAS*GRMAVS
Trigger: ACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTG...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 3 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR TCA 72 bp TATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAG +
Preference number: 3 (lower is better)
Translates to: YLVSDCCSLLLG*VGCLDGWVPGK
Trigger: CTTTCCGGGCACCCATCCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 72 bp GGGATTTTGGACACAATGGCAGGAGAGAGATTTGGGTaGGAGGCTTGTCAGAATGCACCAGGTTGGCAGCCT +
Preference number: 3 (lower is better)
Translates to: GILDTMAGERFG*EACQNAPGWQP
Trigger: AGGCTGCCAACCTGGTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CAA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 3 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 3 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTCGAGTGGCTCTCATCTaGTTTGTGGAAGAGTTCTCT +
Preference number: 3 (lower is better)
Translates to: DALLKVLLPGGFCQVGWARVALI*FVEEFS
Trigger: AGAGAACTCTTCCACAAACAAGATGAGAGCCACTCG...AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTGTAGGCCCTCCCAGTaGACTATGGCTCTTTTCCCG +
Preference number: 3 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGCRPSQ*TMALFP
Trigger: CGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTACA...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CAA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 3 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR TCA 72 bp TTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTaGCTATGGCTCTTTTCCCGAGTGGCTCTCATCTTG +
Preference number: 3 (lower is better)
Translates to: FFHRHPDVGPPS*LWLFSRVALIL
Trigger: CAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR GCA 72 bp CAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTaGTTTGCAGATCCTGGCATCCTTGGGCCGGATGGC +
Preference number: 3 (lower is better)
Translates to: QASFIERKVFEQ*FADPGILGPDG
Trigger: GCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 72 bp TGGTGGGATTTTGGACACAATGGCAGGAGAGAGATTTaGGTGGGAGGCTTGTCAGAATGCACCAGGTTGGCA +
Preference number: 3 (lower is better)
Translates to: WWDFGHNGRREI*VGGLSECTRLA
Trigger: TGCCAACCTGGTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAATCCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CAA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 3 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp GTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGAGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: VGRQVDPTVDGAVVLVEGVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...TCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CAA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: VSVVRLIPLSMALLFLLRVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...CCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CAA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 3 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 3 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp CAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGGATGGCCGTTAGTGTaGCAAACCCAGGAAGCCTTC +
Preference number: 3 (lower is better)
Translates to: QGCPMFYTCRSFLPCRRAGWPLV*QTQEAF
Trigger: GAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCC...TGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp TTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCCAGATCCTGGCATCCTaGGGCCGGATGGCCGTTAGT +
Preference number: 3 (lower is better)
Translates to: FCKRGGKCLVFLEAWDIIQILAS*GRMAVS
Trigger: ACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTG...GATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGTCTTCGAGCAGTGCTTaGCAGATCCTGGCATCCTTG +
Preference number: 3 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVSSSSA*QILASL
Trigger: CAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGA...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CAA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTTGGCTCTCATCTTGTTaGTGGAAGAGTTCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMAWLSSC*WKSSLG
Trigger: GCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCA...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp TTTTGGACACAATGGCAGGAGAGAGATTTGGGTGGGAGGCTTGTCAGAATGCACTCAGGTGATGCGCTCTaGAAGGTCCTCCTTCCAGGA +
Preference number: 3 (lower is better)
Translates to: FWTQWQERDLGGRLVRMHSGDAL*KVLLPG
Trigger: TCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGA...GTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CAA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCAGCAGTGGGCTGGCTTaGGTGGCGTTTGTACTGGAA +
Preference number: 3 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFSSGLA*VAFVLE
Trigger: TTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCT...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 3 (lower is better)
Translates to: NSIAARERVCGWKRWFSLFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAATTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 3 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTACGGTAGTGACATTATaGAACGGAAATAGCAGGCAA +
Preference number: 3 (lower is better)
Translates to: DALLKVLLPGGFCQVGWATVVTL*NGNSRQ
Trigger: TTGCCTGCTATTTCCGTTCAATAATGTCACTACCGT...AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAACGTCTACGGAGCATGTaGTTAAACCCCTCAGGATGG +
Preference number: 3 (lower is better)
Translates to: FSRVALILFVEEFSGPGERLRSM*LNPSGW
Trigger: CCATCCTGAGGGGTTTAACAACATGCTCCGTAGACG...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTTCTTCGAGCAGTGCTTaGCAGATCCTGGCATCCTTG +
Preference number: 3 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTSSSSA*QILASL
Trigger: CAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGA...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGATCAGGTGATGCGCTCTaGAAGGTCCTCCTTCCAGGA +
Preference number: 3 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGSGDAL*KVLLPG
Trigger: TCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGA...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp ATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGAGCAGTGGGCTGGCTTaGGTGGCGTTTGTACTGGAA +
Preference number: 3 (lower is better)
Translates to: ICHLLLEPLSRGQKRSYVSSGLA*VAFVLE
Trigger: TTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCT...CACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CAA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTAGCAGTGGGCTGGCTTaGGTGGCGTTTGTACTGGAA +
Preference number: 3 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSSSGLA*VAFVLE
Trigger: TTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCT...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGAGACCAACGCTAATGTaGGCATTCTTCCATCGCTCC +
Preference number: 3 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVRPTLM*AFFHRS
Trigger: GGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCT...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CAA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: LRPCCASISKTHRPVDWIGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CAA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 3 (lower is better)
Translates to: LRPCCASISKTHRPVDWIALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CAA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 3 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR TCA 72 bp GAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTaGAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: EILLHDIQVMRS*RSSFQEDFARW
Trigger: CCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR TCA 72 bp GAGCACCACAGGCATTACAAAACAGACTTAGGGGGCTaGGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGT +
Preference number: 3 (lower is better)
Translates to: EHHRHYKTDLGG*EGQSQSSLQYC
Trigger: ACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAGTCTGTTTTGTAATGCCTGTGGTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR GCA 72 bp TTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGTGCCTGGATGGATGGG +
Preference number: 3 (lower is better)
Translates to: FLSSIWFPIVAR*CLGELGAWMDG
Trigger: CCCATCCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR GCA 72 bp AACACCATGTTCCAAGGCTGCCCCATGTTTTACACGTaGAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGC +
Preference number: 3 (lower is better)
Translates to: NTMFQGCPMFYT*RSFLPCRRAVG
Trigger: GCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACATGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR GCA 72 bp CTCAGAAATAGGACTGCCTCTCTCTTGTCATCTCTATaGTATGGTTGGGACAAGGGGACAAGGGGCCATGGT +
Preference number: 3 (lower is better)
Translates to: LRNRTASLLSSL*YGWDKGTRGHG
Trigger: ACCATGGCCCCTTGTCCCCTTGTCCCAACCATAGCATAGAGATGACAAGAGAGAGGCAGTCCTATTTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CCA 72 bp ACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTaGGCTGGCTTTGGTGGCGTTTGTACTGGAATCCAA +
Preference number: 3 (lower is better)
Translates to: TRADLSFLVGEQ*AGFGGVCTGIQ
Trigger: TTGGATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCATTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 3 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 3 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 3 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCAGGGGAAGTGTCTGTaGGGCCGAGCTGTTTTTATA +
Preference number: 3 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFQGKCL*GRAVFI
Trigger: TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTG...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAAAGAGGCGGAAAGTGTTaGGTTTTCCTCGAAGCATGG +
Preference number: 3 (lower is better)
Translates to: VMERGHGHMTDQRSGEMERGGKC*VFLEAW
Trigger: CCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCT...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGTGGCTCTCATCTTGTTaGTGGAAGAGTTCTCTGGGC +
Preference number: 3 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMWLSSC*WKSSLG
Trigger: GCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCA...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGTGTAGGCCCTCCCAGTaGACTATGGCTCTTTTCCCG +
Preference number: 3 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLCRPSQ*TMALFP
Trigger: CGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTACA...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp ATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGTGGGATGGGCTGACTTaGAACCCCAAACCCTCAAGT +
Preference number: 3 (lower is better)
Translates to: ICHLLLEPLSRGQKRSYVWDGLT*NPKPSS
Trigger: ACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCA...CACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CAA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGAGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CAA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 3 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR TCA 72 bp TTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTaGGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTC +
Preference number: 3 (lower is better)
Translates to: LVAFVLESNKHI*GLVTPLVMQFL
Trigger: GAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR TCA 72 bp ATAAAATATGTGCACACAAGAGTTAGCAAAGTGTGGTaGCCCCCGAGAGGAAAGGTCCAGGAGGGAGAGCAC +
Preference number: 3 (lower is better)
Translates to: IKYVHTRVSKVW*PPRGKVQEGEH
Trigger: GTGCTCTCCCTCCTGGACCTTTCCTCTCGGGGGTCACCACACTTTGCTAACTCTTGTGTGCACATATTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR GCA 72 bp AGACAAGTTGGTGAGCTTAGCTCTCAGAACCAAATCTaGCACTTACTCCTGGAGCCCTTGTCTAGAGGACAG +
Preference number: 3 (lower is better)
Translates to: RQVGELSSQNQI*HLLLEPLSRGQ
Trigger: CTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCTGAGAGCTAAGCTCACCAACTTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CCA 72 bp TTGTTAAACCCCTCAGGATGGCAACTCGGTAGCATTTaGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTA +
Preference number: 3 (lower is better)
Translates to: LLNPSGWQLGSI*LLPEPLTVVTL
Trigger: TAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCTACCGAGTTGCCATCCTGAGGGGTTTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 72 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTaGTCACCCCTTTGGTTATGCAGTTCCTCTCCTGGA +
Preference number: 3 (lower is better)
Translates to: RLYWNPISTSEG*SPLWLCSSSPG
Trigger: TCCAGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 72 bp TTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTaGCGTTTGTACTGGAATCCAATAAGCACATCTGAG +
Preference number: 3 (lower is better)
Translates to: FLPCRRAVGWLW*RLYWNPISTSE
Trigger: CTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 72 bp CTACAAGAGCCTCTAATGGTGGGATTTTGGACACAATaGCAGGAGAGAGATTTGGGTGGGAGGCTTGTCAGA +
Preference number: 3 (lower is better)
Translates to: LQEPLMVGFWTQ*QERDLGGRLVR
Trigger: TCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAATCCCACCATTAGAGGCTCTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CAA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACAGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 3 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: SLREKSSSSALQILASLGVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTCAGGGGAAGTGTCTGTaGGGCCGAGCTGTTTTTATA +
Preference number: 3 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSQGKCL*GRAVFI
Trigger: TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTG...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTACGGTAGTGACATTATaGAACGGAAATAGCAGGCAA +
Preference number: 3 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMATVVTL*NGNSRQ
Trigger: TTGCCTGCTATTTCCGTTCAATAATGTCACTACCGT...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTCGTCTACGGAGCATGTaGTTAAACCCCTCAGGATGG +
Preference number: 3 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLRLRSM*LNPSGW
Trigger: CCATCCTGAGGGGTTTAACAACATGCTCCGTAGACG...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGCTCAAGCGAGTTTCATaGAGAGAAAAGTCTTCGAGC +
Preference number: 3 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPLKRVS*REKSSS
Trigger: GCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAG...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAAGGGCTGGTCACCCCTTaGGTTATGCAGTTCCTCTCC +
Preference number: 3 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKGLVTP*VMQFLS
Trigger: GGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCC...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CAA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGTGGCTTTGGTGGCGTTaGTACTGGAATCCAATAAGC +
Preference number: 3 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMWLWWR*YWNPIS
Trigger: GCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 3 (lower is better)
Translates to: KLKRVSLREKSSSSALQIMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR TCA 72 bp GCTATCCTGATGTCATGGAACGAGGTCACGGACACATaGCTGATCAAAGAAGTGGGGAGATGGAAAACTGTG +
Preference number: 3 (lower is better)
Translates to: AILMSWNEVTDT*LIKEVGRWKTV
Trigger: CACAGTTTTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR TCA 72 bp ATGTGGGGCTGGGAATCTTCGATCCGGAATTCAGGATaGGCCATGAAGTTATGGATGGAGGTTCGAGATTCA +
Preference number: 3 (lower is better)
Translates to: MWGWESSIRNSG*AMKLWMEVRDS
Trigger: TGAATCTCGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCCCAGCCCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR CCA 72 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTaGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAG +
Preference number: 3 (lower is better)
Translates to: SVGGNVGFLSSI*FPIVARCCLGE
Trigger: CTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 72 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCC +
Preference number: 3 (lower is better)
Translates to: SNSIAARERVCG*KRWFSLQYLVS
Trigger: GGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 72 bp GAGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGT +
Preference number: 3 (lower is better)
Translates to: EFKQHRSQRKGL*VETLVFSPVFG
Trigger: ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CCA 72 bp TCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTaGTGGCGTTTGTACTGGAATCCAATAAGCACATCT +
Preference number: 3 (lower is better)
Translates to: SFLPCRRAVGWL*WRLYWNPISTS
Trigger: AGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 3 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGAGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 3 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 3 (lower is better)
Translates to: NSIAARERVCGWKRWFSLQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp CAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCACTCAAGCGAGTTTCATaGAGAGAAAAGTCTTCGAGC +
Preference number: 3 (lower is better)
Translates to: QGCPMFYTCRSFLPCRRALKRVS*REKSSS
Trigger: GCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAG...TGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGCTCAAGCGAGTTTCATaGAGAGAAAAGTCTTCGAGC +
Preference number: 3 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMLKRVS*REKSSS
Trigger: GCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAG...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAACTCAAGCGAGTTTCATaGAGAGAAAAGTCTTCGAGC +
Preference number: 3 (lower is better)
Translates to: VMERGHGHMTDQRSGEMELKRVS*REKSSS
Trigger: GCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAG...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCAAGAGGCGGAAAGTGTTaGGTTTTCCTCGAAGCATGG +
Preference number: 3 (lower is better)
Translates to: CVQASFIPDKRRPTLMLARGGKC*VFLEAW
Trigger: CCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCT...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTCTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 3 (lower is better)
Translates to: VETLVFSPVFGFRLLLVALSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR-3UTR CAA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTAGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATATTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 3 (lower is better)
Translates to: LRPCCASISKTHRPVDWIFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 3 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 3 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 3 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTCTCAAGCGAGTTTCATaGAGAGAAAAGTCTTCGAGC +
Preference number: 3 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLLKRVS*REKSSS
Trigger: GCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAG...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR CAA 90 bp AGAAGAGTGAAGGGACTCATCCCACCACATAATAAGACATTAGAAATTGACAATGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 3 (lower is better)
Translates to: RRVKGLIPPHNKTLEIDNALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...ATTGTCAATTTCTAATGTCTTATTATGTGGTGGGATGAGTCCCTTCACTCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460129.5
3UTR-3UTR CAA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 3 (lower is better)
Translates to: KLKRVSLREKSSSSALQIEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR TCA 72 bp GGATACATTCAGAGATACTTCTTCACGACATTCAGGTaGTGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATT +
Preference number: 3 (lower is better)
Translates to: GYIQRYFFTTFR*CALEGPPSRRI
Trigger: AATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAATGTATCC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR TCA 72 bp GCTGGGAATCTTCGATCCGGAATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTCGAGATTCAGGCTTTT +
Preference number: 3 (lower is better)
Translates to: AGNLRSGIQDEP*SYGWRFEIQAF
Trigger: AAAAGCCTGAATCTCGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR TCA 72 bp GCGGATCCGGCTTCAAGGAAGCCAAGAGTCTGGGATTaGTTCACATTCATTTCAGGCTCAAGGTTAAAGACT +
Preference number: 3 (lower is better)
Translates to: ADPASRKPRVWD*FTFISGSRLKT
Trigger: AGTCTTTAACCTTGAGCCTGAAATGAATGTGAATCAATCCCAGACTCTTGGCTTCCTTGAAGCCGGATCCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460129.5
3UTR GCA 72 bp ATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATaGAGTTCCTCTCCTGGATACATTCAGAGATACTTC +
Preference number: 3 (lower is better)
Translates to: ISTSEGWSPLWL*SSSPGYIQRYF
Trigger: GAAGTATCTCTGAATGTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CCA 72 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTaGTTATGCAGTTCCTCTCCTGGATACATTCAGAGA +
Preference number: 3 (lower is better)
Translates to: NPISTSEGWSPL*LCSSSPGYIQR
Trigger: TCTCTGAATGTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAACGGTAGTGACATTATaGAACGGAAATAGCAGGCAA +
Preference number: 3 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGTVVTL*NGNSRQ
Trigger: TTGCCTGCTATTTCCGTTCAATAATGTCACTACCGT...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTTCTTCGAGCAGTGCTTaGCAGATCCTGGCATCCTTG +
Preference number: 3 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCSSSSA*QILASL
Trigger: CAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGA...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATCTCAAGCGAGTTTCATaGAGAGAAAAGTCTTCGAGC +
Preference number: 3 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHLKRVS*REKSSS
Trigger: GCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAG...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp AGAAGAGTGAAGGGACTCATCCCACCACATAATAAGACATTAGAAATTGACAATGACAGAGCCCAGAATTaGGGGGTGGGAATGGGACAG +
Preference number: 3 (lower is better)
Translates to: RRVKGLIPPHNKTLEIDNDRAQN*GVGMGQ
Trigger: CTGTCCCATTCCCACCCCCAAATTCTGGGCTCTGTC...ATTGTCAATTTCTAATGTCTTATTATGTGGTGGGATGAGTCCCTTCACTCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CAA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR CAA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGCTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 3 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR CAA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 3 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCACAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 3 (lower is better)
Translates to: CVQASFIPDKRRPTLMLAQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 3 (lower is better)
Translates to: EEWILQERRKVFGFPRSMQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR GCA 72 bp ATGGTCATAAATTATTTACCCCCTAATGGAGTGAACTaGCAAACGTACCCCATGCTGCTAGATATAGGACGC +
Preference number: 3 (lower is better)
Translates to: MVINYLPPNGVN*QTYPMLLDIGR
Trigger: GCGTCCTATATCTAGCAGCATGGGGTACGTTTGGCAGTTCACTCCATTAGGGGGTAAATAATTTATGACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR-3UTR CAA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 3 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTACGTCTACGGAGCATGTaGTTAAACCCCTCAGGATGG +
Preference number: 3 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLRLRSM*LNPSGW
Trigger: CCATCCTGAGGGGTTTAACAACATGCTCCGTAGACG...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp AGAAGAGTGAAGGGACTCATCCCACCACATAATAAGACATTAGAAATTGACAATATCTCTATGCTATGGTaGGGACAAGGGGACAAGGGG +
Preference number: 3 (lower is better)
Translates to: RRVKGLIPPHNKTLEIDNISMLW*GQGDKG
Trigger: CCCCTTGTCCCCTTGTCCCAACCATAGCATAGAGAT...ATTGTCAATTTCTAATGTCTTATTATGTGGTGGGATGAGTCCCTTCACTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CCA 72 bp AACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAAT +
Preference number: 3 (lower is better)
Translates to: NLVSVYEVLRFH*CKSTRRVKLCN
Trigger: ATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR-3UTR CAA 90 bp GTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACAGGGGAAGTGTCTGTaGGGCCGAGCTGTTTTTATA +
Preference number: 3 (lower is better)
Translates to: VFIASQPPVFLNHTNSQRQGKCL*GRAVFI
Trigger: TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTG...TCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTCAAGCGAGTTTCATaGAGAGAAAAGTCTTCGAGC +
Preference number: 3 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCLKRVS*REKSSS
Trigger: GCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAG...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACACTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 3 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
3UTR-3UTR CAA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTACTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 3 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR TCA 72 bp ACGCAGAGTGCAAGCTTTATGTACTACAGTGAGTTTTaGCAAACCAACCATTTCGTGTGTGTGTGTGTGTAT +
Preference number: 3 (lower is better)
Translates to: TQSASFMYYSEF*QTNHFVCVCVY
Trigger: ATACACACACACACACACGAAATGGTTGGTTTGTCAAAACTCACTGTAGTACATAAAGCTTGCACTCTGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CCA 72 bp AAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATaGGACATCATCGATCATGGTATTCAAAATGTCTTT +
Preference number: 3 (lower is better)
Translates to: KRGGKCLVFLEA*DIIDHGIQNVF
Trigger: AAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 3 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR-3UTR CAA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGACGGTAGTGACATTATaGAACGGAAATAGCAGGCAA +
Preference number: 3 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQTVVTL*NGNSRQ
Trigger: TTGCCTGCTATTTCCGTTCAATAATGTCACTACCGT...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR TCA 72 bp TTTGAAATGCTCTTAGTAAACTCAAGCGAGTTTCATTaGGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCC +
Preference number: 3 (lower is better)
Translates to: FEMLLVNSSEFH*EKSLRAVLCRS
Trigger: GGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTTACTAAGAGCATTTCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGAGTCCGGCTCCGGGCTaGTGGGGAAGTCGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRSPAPG*WGSRGR
Trigger: CCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACT...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGGCAGCAGGGTCTCCGTaGGCGGCTCAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRAAGSP*AAQWPV
Trigger: CACTGGCCACTGAGCCGCCCACGGAGACCCTGCTGC...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCCGGAACCACAGGATCTaGCCCCGCCGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGRNHRI*PRRSSR
Trigger: GCGGGAGCTGCGGCGGGGCCAGATCCTGTGGTTCCG...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGGCGGACCGTGATGCCTaGCCGCTGGCACTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRADRDA*PLALAD
Trigger: ATCCGCAAGTGCCAGCGGGCAGGCATCACGGTCCGC...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGCCGGCTCCGGGCTGCTaGGGAAGTCGCGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRPAPGC*GSRGRP
Trigger: TGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGG...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGTGCAGGCCCGTCGTTaGTCCCGTCCCCCGTCACGG +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGVQARR*SRPPSR
Trigger: CCGTGACGGGGGACGGGACCAACGACGGGCCTGCAC...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGGGTCATTGCCCTGGATaGAGAGGCCGTCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRGHCPG*RGRRQG
Trigger: TCCCTGCCGACGGCCTCTTCATCCAGGGCAATGACC...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGCACAGCCAGCTTGGTaGGCTTGCCCTGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGAQPAW*ACPAAR
Trigger: CCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGC...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCCCACGTCGGCCTTCTTaGGTGCAGGCCCGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGPRRPS*VQARRW
Trigger: CCAACGACGGGCCTGCACTCAAGAAGGCCGACGTGG...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGCCTCCACGTCCTCGTTaGGCTCCTCCTCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRPPRPR*APPPGS
Trigger: AGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGG...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGAGTCCGGCTCCGGGCTaGTGGGGAAGTCGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRSPAPG*WGSRGR
Trigger: CCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACT...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGCGGACCGTGATGCCTaGCCGCTGGCACTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGADRDA*PLALAD
Trigger: ATCCGCAAGTGCCAGCGGGCAGGCATCACGGTCCGC...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCCGGCTCCGGGCTGCTaGGGAAGTCGCGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVPAPGC*GSRGRP
Trigger: TGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGG...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGTCATTGCCCTGGATaGAGAGGCCGTCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGGHCPG*RGRRQG
Trigger: TCCCTGCCGACGGCCTCTTCATCCAGGGCAATGACC...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGCACCAACATCCGTCCTaGGCCCTCCATCACGTGGGT +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRHQHPS*ALHHVG
Trigger: ACCCACGTGATGGAGGGCTCAGGACGGATGTTGGTG...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCAGGCCAACGAGATGGTaGCGGCCAGAGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGRPTRW*RPEGAP
Trigger: AGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCT...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGTGCGGATCCTCCTGTTaGACTCCTTGCCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRCGSSC*TPCPRG
Trigger: GCCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCA...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGTGCTCGATGCGGCTCTaGAGGCCCCGGAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRCSMRL*RPRNCF
Trigger: GAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCA...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGCCCCCTTGCTGTACATaGGGAAGCTCTCGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRPPCCT*GSSRRA
Trigger: TGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGG...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGAGTCCGGCTCCGGGCTaGTGGGGAAGTCGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHESPAPG*WGSRGR
Trigger: CCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACT...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGTCACGGCCACCACCTaGCGCTGCTCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGVTATT*RCSVCV
Trigger: CACACACACTGAGCAGCGGCAGGTGGTGGCCGTGAC...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGGGATCTGGACCACCTaGCCAGCCCGGACCACGGTA +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRGIWTT*PARTTV
Trigger: TACCGTGGTCCGGGCTGGCCAGGTGGTCCAGATCCC...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCTCAGCCACAGGGATCTaGACCACCTGGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGSATGI*TTWPAR
Trigger: CCGGGCTGGCCAGGTGGTCCAGATCCCTGTGGCTGA...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGCAGCAGGGTCTCCGTaGGCGGCTCAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEAAGSP*AAQWPV
Trigger: CACTGGCCACTGAGCCGCCCACGGAGACCCTGCTGC...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGCCACGTCGGCCTTCTTaGGTGCAGGCCCGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEPRRPS*VQARRW
Trigger: CCAACGACGGGCCTGCACTCAAGAAGGCCGACGTGG...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCTCATGGTCCTGGAGATaGGCGGCTTGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGSWSWR*AACCGR
Trigger: ACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGA...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGCCTCCACGTCCTCGTTaGGCTCCTCCTCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRPPRPR*APPPGS
Trigger: AGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGG...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGCTAACTCGTCCTGCATaGGCCTGGCCCGTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHELTRPA*AWPVAG
Trigger: GCCAGCCACGGGCCAGGCTCATGCAGGACGAGTTAG...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467702.3
CDS-3UTR GCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGCCCGCCTTCCCGATCTaGACAGCCAGCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRPAFPI*TASLVS
Trigger: GCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGG...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCGCACGTAGACGGGCGTaGACTCAGGCAGCCACGGCT +
Preference number: 4 (lower is better)
Translates to: MRAGGQARGSSAKATSPGARRRA*TQAATA
Trigger: AGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGC...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCGCGGACCGTGATGCCTaGCCGCTGGCACTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVADRDA*PLALAD
Trigger: ATCCGCAAGTGCCAGCGGGCAGGCATCACGGTCCGC...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGTCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTGGCCACGTCAGTGCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: GSMRAGGQARGSSAKATSGHVSA*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCC...AGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCGTTTGCTGCGGTCCTTaGTCGGGCTGGGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: MRAGGQARGSSAKATSPGVCCGP*SGWAQG
Trigger: CCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAAC...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCTCAGCCACAGGGATCTaGACCACCTGGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVSATGI*TTWPAR
Trigger: CCGGGCTGGCCAGGTGGTCCAGATCCCTGTGGCTGA...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGTGCCTGCGATGCCCATaGCGAAGCCCACGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHECLRCP*RSPRRP
Trigger: AGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCA...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTCCGTGGGCGGCTCAGTaGCCAGTGCCAGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACPWAAQ*PVPARQ
Trigger: TTGCCTCGCTGGCACTGGCCACTGAGCCGCCCACGG...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGTCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: GSMRAGGQARGSSAKATSPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...AGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGATCACCGTGATGGCTaGCATCACCAAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGDHRDG*HHQARL
Trigger: AAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATC...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGSLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCTCTGCTGCTGGTAGCTaGAGGCCATCCCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGSAAGS*RPSPFF
Trigger: GAAGAAGGGGGATGGCCTTCAGCTACCAGCAGCAGA...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360273.7
ENST00000645850.1
CDS-3UTR TCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGAGTGGGCTAGGGGAGTaGGGGTTCCGAGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHESGLGE*GFREGP
Trigger: TGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACT...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGCCAGGTCTGGAGCGGTaGCCGGCAAACCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRPGLER*PANLQQ
Trigger: CTGTTGAAGGTTTGCCGGGCACCGCTCCAGACCTGG...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCCTCTGGCATCTGGCTaGGCACGGGCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVPLASG*ARARSP
Trigger: AGGACTACGAGCCCGTGCGCAGCCAGATGCCAGAGG...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTGGCCACGTCAGTGCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACGHVSA*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCC...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGCGGCTCAGTGGCCAGTaGCAGCGAGGCAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHERLSGQ*QRGKRV
Trigger: GACACGTTTGCCTCGCTGGCACTGGCCACTGAGCCG...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGCAGTGGGGCCCATGCTaGTCCCTGGAACTGGCATCT +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRQWGPC*SLELAS
Trigger: AGATGCCAGTTCCAGGGAGCAGCATGGGCCCCACTG...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGCCGAACTCGCCCCCATaGCTCGACTCATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRPNSPP*LDSFLW
Trigger: CCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTCCTCTGCCCCACCCTaGGCCGTCGCACATCCTTCG +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACSSAPP*AVAHPS
Trigger: CGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGA...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCATCAGCCACAGGGATCTaGACCACCTGGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SMRAGGQARGSSAKATSPSATGI*TTWPAR
Trigger: CCGGGCTGGCCAGGTGGTCCAGATCCCTGTGGCTGA...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTCCGGCTCCGGGCTGCTaGGGAAGTCGCGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFPAPGC*GSRGRP
Trigger: TGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGG...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCATGCCTGCGATGCCCATaGCGAAGCCCACGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: SMRAGGQARGSSAKATSPCLRCP*RSPRRP
Trigger: AGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCA...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGATGCACCACATCCACTaGTCCAGCTGCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRMHHIH*SSCSGE
Trigger: CTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCAT...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGCGGAACCACAGGATCTaGCCCCGCCGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLRNHRI*PRRSSR
Trigger: GCGGGAGCTGCGGCGGGGCCAGATCCTGTGGTTCCG...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGAACTGGCATCTACATaGTCAGGGGTGGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGELAST*SGVVAP
Trigger: GGGAGCCACCACCCCTGACCATGTAGATGCCAGTTC...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460129.5
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGTGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHECRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRSLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGCAAGAGGCTGCCGGGTaGTGGCTGCTTGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GGQARGSSAKATSPGCGWQEAAG*WLLVAV
Trigger: GACAGCCACAAGCAGCCATCACCCGGCAGCCTCTTG...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTCCTCTGGCATCTGGCTaGGCACGGGCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACPLASG*ARARSP
Trigger: AGGACTACGAGCCCGTGCGCAGCCAGATGCCAGAGG...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGAGTCCGGCTCCGGGCTaGTGGGGAAGTCGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLSPAPG*WGSRGR
Trigger: CCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACT...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTGTCACGGCCACCACCTaGCGCTGCTCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACVTATT*RCSVCV
Trigger: CACACACACTGAGCAGCGGCAGGTGGTGGCCGTGAC...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGTGGGGTTCCGGAAGATaGCGTCAAAGACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRWGSGR*RQRHCA
Trigger: AGCGCAATGTCTTTGACGGCATCTTCCGGAACCCCA...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCCTGCCGGGTGATGGCTaGTTGTGGCTGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: MRAGGQARGSSAKATSPGLPGDG*LWLSSA
Trigger: TGCTGAGGACAGCCACAAGCAGCCATCACCCGGCAG...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGAAGTACAGGGAAACCTaGGCCGGCTCCGAGAGCGAG +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEKYRET*AGSESE
Trigger: CTCGCTCTCGGAGCCGGCGCAGGTTTCCCTGTACTT...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCCCGAACTCGCCCCCATaGCTCGACTCATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGPNSPP*LDSFLW
Trigger: CCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGTGTTTGGCTTTGCTCTaGCTGGCGTCCACATTGCCA +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRCLALL*LASTLP
Trigger: TGGCAATGTGGACGCCAGCCAGAGCAAAGCCAAACA...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGCCCTCCTTCTCTaGGGGCAGAATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEGALLL*GQNLGG
Trigger: ACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCC...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCCCGGCTCCGGGCTGCTaGGGAAGTCGCGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPPAPGC*GSRGRP
Trigger: TGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGG...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCGTGATGCCTGCCCGCTaGCACTTGCGGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVVMPAR*HLRMAS
Trigger: AGAAGCCATCCGCAAGTGCCAGCGGGCAGGCATCAC...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGTGCTTTGCAGATCCTaGCATCCTTGGGCCGGATGG +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRVLCRS*HPWAGW
Trigger: CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCAC...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTAGGTGTCCTCCGGTGTaGGACGAGGTCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFRCPPV*DEVQGP
Trigger: CGGCCCCTGGACCTCGTCCCACACCGGAGGACACCT...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCGACCACACAGATAACTaGGAGGAGAATGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVDHTDN*EENGGP
Trigger: GGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTC...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTCACCAACATCCGTCCTaGGCCCTCCATCACGTGGGT +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACHQHPS*ALHHVG
Trigger: ACCCACGTGATGGAGGGCTCAGGACGGATGTTGGTG...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCACAGCCAGCTTGGTaGGCTTGCCCTGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFAQPAW*ACPAAR
Trigger: CCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGC...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGATCACCGTGATGGCTaGCATCACCAAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEDHRDG*HHQARL
Trigger: AAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATC...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCTCTCCCGCCCCATTaGGGATTTTGCAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRALPPH*GFCSTS
Trigger: AGAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGC...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTCCACGTCGGCCTTCTTaGGTGCAGGCCCGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFPRRPS*VQARRW
Trigger: CCAACGACGGGCCTGCACTCAAGAAGGCCGACGTGG...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGCAGTGGAGAGCAGCTaGATGGCTTCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGAVESS*MASLQT
Trigger: AGTTTGGAGGGAAGCCATTCAGCTGCTCTCCACTGC...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCAGTGGAGAGCAGCTaGATGGCTTCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRAVESS*MASLQT
Trigger: AGTTTGGAGGGAAGCCATTCAGCTGCTCTCCACTGC...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHESLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGTCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCTCCTGGCTCCGAATaGACATGGAGCATGGTGTGC +
Preference number: 4 (lower is better)
Translates to: GSMRAGGQARGSSAKATSPPGSE*TWSMVC
Trigger: GCACACCATGCTCCATGTTCATTCGGAGCCAGGAGG...AGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR TCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGCCTCCTGGCTCCGAATaGACATGGAGCATGGTGTGC +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEPPGSE*TWSMVC
Trigger: GCACACCATGCTCCATGTTCATTCGGAGCCAGGAGG...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTCGCACATCCTTCGTTaGCCTCGCCGGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFSHILR*PRRAGG
Trigger: ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGCCTTGTCCACGGACTTaGGCACCTGGTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEPCPRT*APGQTL
Trigger: GAGAGTCTGACCAGGTGCGCAAGTCCGTGGACAAGG...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCACGTAGACGGGCGTaGACTCAGGCAGCCACGGCT +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFARRRA*TQAATA
Trigger: AGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGC...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGCCTGTACCACTGTCATaGGATTGGTGGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRPVPLS*DWWSAC
Trigger: GCACGCTGACCACCAATCGCATGACAGTGGTACAGG...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTCCCCCTTGCTGTACATaGGGAAGCTCTCGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACPPCCT*GSSRRA
Trigger: TGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGG...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCGGACCGTGATGCCTaGCCGCTGGCACTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFADRDA*PLALAD
Trigger: ATCCGCAAGTGCCAGCGGGCAGGCATCACGGTCCGC...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GAGTGGGCTAGGGGAGTGAGGGTTCCGAGAAGGCCCAGGCAAGAACTGCCTGCAGGCCACGTCAGTGCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: EWARGVRVPRRPRQELPAGHVSA*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCC...TGCAGGCAGTTCTTGCCTGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCCTGTGTGAGCCTGCCTaGCTCCTTGAGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGLCEPA*LLEELE
Trigger: CTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAG...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGAGGGGGTGCATGTGTaGAAGCATCCTTCATTCCTG +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGEGVHV*KHPSFL
Trigger: CAGGAATGAAGGATGCTTGCACACATGCACCCCCTC...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCACGCTGGACAAGAGGCTaGCGGGTGATGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SMRAGGQARGSSAKATSPRWTRG*RVMAAC
Trigger: ACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCG...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTGTCACCCATGTTTGCTaGGGTCCTTGCTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACVTHVC*GPCSGW
Trigger: CCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGAC...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCCCGAACTCGCCCCCATaGCTCGACTCATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGPNSPP*LDSFLW
Trigger: CCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTCCTCTGCCCCACCCTaGGCCGTCGCACATCCTTCG +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFSSAPP*AVAHPS
Trigger: CGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGGATCTGGACCACCTaGCCAGCCCGGACCACGGTA +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFGIWTT*PARTTV
Trigger: TACCGTGGTCCGGGCTGGCCAGGTGGTCCAGATCCC...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTCAGCCACAGGGATCTaGACCACCTGGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFSATGI*TTWPAR
Trigger: CCGGGCTGGCCAGGTGGTCCAGATCCCTGTGGCTGA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCCTCCCGCTGTCGATCTaGAACATCTTCTCGCCAACA +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGLPLSI*NIFSPT
Trigger: TGTTGGCGAGAAGATGTTCCAGATCGACAGCGGGAG...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCATGCACCACATCCACTaGTCCAGCTGCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGMHHIH*SSCSGE
Trigger: CTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCAT...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGAGATTGGCTACATCCTaGCTCTGGCTGGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRRLATS*LWLVTE
Trigger: CTCGGTCACCAGCCAGAGCCAGGATGTAGCCAATCT...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: SMRAGGQARGSSAKATSPSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GAGTGGGCTAGGGGAGTGAGGGTTCCGAGAAGGCCCAGGCAAGAACTGCCTGCACCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: EWARGVRVPRRPRQELPAPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...TGCAGGCAGTTCTTGCCTGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGTCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTAGATCCTGGCATCCTTaGGCCGGATGGCCGTTAGTG +
Preference number: 4 (lower is better)
Translates to: GSMRAGGQARGSSAKATSRSWHP*AGWPLV
Trigger: CACTAACGGCCATCCGGCCCAAGGATGCCAGGATCT...AGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGGGCTCTTTTCCCGAGTaGCTCTCATCTTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRGSFPE*LSSCLW
Trigger: CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCC...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCGAACTGGCATCTACATaGTCAGGGGTGGTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVELAST*SGVVAP
Trigger: GGGAGCCACCACCCCTGACCATGTAGATGCCAGTTC...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460129.5
ENST00000646379.1
CDS-3UTR CCA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCCAGCCAATCCTGGACTaGCCCCAAACGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: MRAGGQARGSSAKATSPGQPILD*PQTSSP
Trigger: AGGAGAGCTCGTTTGGGGCCAGTCCAGGATTGGCTG...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467702.3
CDS-3UTR TCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGGAGGTCACCATATTTaGCCTGGGCTATGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRGGHHI*PGLCPQ
Trigger: TTGGGGACATAGCCCAGGTCAAATATGGTGACCTCC...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTCAGGTGATGCGCTCTTaGAGGTCCTCCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACQVMRS*RSSFQE
Trigger: CTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTG...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTGGCTTAGGGGGCAGGTaGAATGATGGGAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACGLGGR*NDGRNS
Trigger: GCTGTTCCTCCCATCATTTCACCTGCCCCCTAAGCC...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GGGTCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCTTCCTGCTATTGTCTaGCTTCCCTCCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSMRAGGQARGSSAKATSLPAIV*LPSWLW
Trigger: CCAGAGCCAGGAGGGAAGTCAGACAATAGCAGGAAG...AGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS-3UTR GCA 90 bp GGGTCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCTGTACCACTGTCATaGGATTGGTGGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: GSMRAGGQARGSSAKATSPVPLS*DWWSAC
Trigger: GCACGCTGACCACCAATCGCATGACAGTGGTACAGG...AGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCTTGTCAATTCGCTCCTaGTCAATCTCCCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGLSIRS*SISPFS
Trigger: CGAGAAGGGGGAGATTGAGCAGGAGCGAATTGACAA...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGTCGGCCTTCTTGAGTaGAGGCCCGTCGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFVGLLE*RPVVGP
Trigger: GGGACCAACGACGGGCCTGCACTCAAGAAGGCCGAC...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGGTCGGCCTTCTTGAGTaGAGGCCCGTCGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLVGLLE*RPVVGP
Trigger: GGGACCAACGACGGGCCTGCACTCAAGAAGGCCGAC...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTCACCCAGAGCATCTaGACGGCCTTCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACFTQSI*TAFRGE
Trigger: CTCCCCTCTGAAGGCCGTGCAGATGCTCTGGGTGAA...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCCTGTGTGAGCCTGCCTaGCTCCTTGAGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: MRAGGQARGSSAKATSPGLCEPA*LLEELE
Trigger: CTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAG...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGCTGTGTGAGCCTGCCTaGCTCCTTGAGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHELCEPA*LLEELE
Trigger: CTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAG...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGTACAACTTCTCCTCTaGCATCTGGCTGCGCACGGG +
Preference number: 4 (lower is better)
Translates to: GGQARGSSAKATSPGCGWVQLLL*HLAAHG
Trigger: CCCGTGCGCAGCCAGATGCCAGAGGAGAAGTTGTAC...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAACCGGCTCCGGGCTGCTaGGGAAGTCGCGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQPAPGC*GSRGRP
Trigger: TGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGG...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGTCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: GGQARGSSAKATSPGCGWSPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHELLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGAGGAGAGCAGTGGGCTaGCTTTGGTGGCGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHERRAVG*LWWRLY
Trigger: GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCT...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGCTATCCTGATGTCATaGAACGAGGTCACGGACACA +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGAILMS*NEVTDT
Trigger: TGTGTCCGTGACCTCGTTCCATGACATCAGGATAGC...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGAGGTCACCATATTTaGCCTGGGCTATGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEGGHHI*PGLCPQ
Trigger: TTGGGGACATAGCCCAGGTCAAATATGGTGACCTCC...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCACCACGTCGGCCTTCTTaGGTGCAGGCCCGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAAPRRPS*VQARRW
Trigger: CCAACGACGGGCCTGCACTCAAGAAGGCCGACGTGG...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTGCAGTGGAGAGCAGCTaGATGGCTTCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACAVESS*MASLQT
Trigger: AGTTTGGAGGGAAGCCATTCAGCTGCTCTCCACTGC...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCGCTGTTGTTCTTGTTaGGGGATGACGGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLRCCSC*GMTAGS
Trigger: CGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCG...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGTGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLCRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFCRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGTAGGCCCTCCCAGTTaGCTATGGCTCTTTTCCCGA +
Preference number: 4 (lower is better)
Translates to: SMRAGGQARGSSAKATSPVGPPS*LWLFSR
Trigger: TCGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTAC...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR TCA 90 bp GGGTCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTTACCCCCTAATGGAGTaGACTGCCAAACGTACCCCA +
Preference number: 4 (lower is better)
Translates to: GSMRAGGQARGSSAKATSYPLME*TAKRTP
Trigger: TGGGGTACGTTTGGCAGTTCACTCCATTAGGGGGTA...AGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352432.9
ENST00000460129.5
CDS-3UTR GCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGAGCTCCTCCATTGTaGACCCGAACTCGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFGAPPL*TRTRPH
Trigger: ATGGGGGCGAGTTCGGGTGCACAATGGAGGAGCTCC...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCCAGGTCTGGAGCGGTaGCCGGCAAACCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLPGLER*PANLQQ
Trigger: CTGTTGAAGGTTTGCCGGGCACCGCTCCAGACCTGG...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTGCTCGATGCGGCTCTaGAGGCCCCGGAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFCSMRL*RPRNCF
Trigger: GAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCCTGTTGTTTGGCTTTaGTCTGGCTGGCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVPVVWL*SGWRPH
Trigger: ATGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGG...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR GCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCAGTCCGGCTCCGGGCTaGTGGGGAAGTCGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGSPAPG*WGSRGR
Trigger: CCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACT...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGCCACGTCAGTGCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNGHVSA*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCC...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: MRAGGQARGSSAKATSPGIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GGGTCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GSMRAGGQARGSSAKATSIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...AGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: MRAGGQARGSSAKATSPGPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGCTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTCTGCCGGGTGATGGCTaGTTGTGGCTGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFLPGDG*LWLSSA
Trigger: TGCTGAGGACAGCCACAAGCAGCCATCACCCGGCAG...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ATTCTGCAGCGCCAGGAGTCACTGAACGGGCTCCCTGCCCTTCCCTCATCTGTTGGGATCTGGACCACCTaGCCAGCCCGGACCACGGTA +
Preference number: 4 (lower is better)
Translates to: ILQRQESLNGLPALPSSVGIWTT*PARTTV
Trigger: TACCGTGGTCCGGGCTGGCCAGGTGGTCCAGATCCC...AACAGATGAGGGAAGGGCAGGGAGCCCGTTCAGTGACTCCTGGCGCTGCAGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGGCGCCCTCCTTCTCTaGGGGCAGAATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLGALLL*GQNLGG
Trigger: ACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCC...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGCCGTGGGCGGCTCAGTaGCCAGTGCCAGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LCRSWHPWAGWPLVLQTQPWAAQ*PVPARQ
Trigger: TTGCCTCGCTGGCACTGGCCACTGAGCCGCCCACGG...CTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGCTCCCGCTGTCGATCTaGAACATCTTCTCGCCAACA +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHELPLSI*NIFSPT
Trigger: TGTTGGCGAGAAGATGTTCCAGATCGACAGCGGGAG...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGCGGAACCACAGGATCTaGCCCCGCCGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: VSVVRLIPLSMALLFLLRRNHRI*PRRSSR
Trigger: GCGGGAGCTGCGGCGGGGCCAGATCCTGTGGTTCCG...CCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTAGATTGGCTACATCCTaGCTCTGGCTGGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACRLATS*LWLVTE
Trigger: CTCGGTCACCAGCCAGAGCCAGGATGTAGCCAATCT...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ATTCTGCAGCGCCAGGAGTCACTGAACGGGCTCCCTGCCCTTCCCTCATCTGTTGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ILQRQESLNGLPALPSSVGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...AACAGATGAGGGAAGGGCAGGGAGCCCGTTCAGTGACTCCTGGCGCTGCAGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: DALLKVLLPGGFCQVGWAMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: EKSSSSALQILASLGRMAMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...GGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCTGGTCACCCCTTTaGTTATGCAGTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEGWSPL*LCSSSP
Trigger: AGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCC...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGAGTCTCCATTCAGTaGGGCCCATGCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFGVSIQ*GPCCSL
Trigger: CAGGGAGCAGCATGGGCCCCACTGAATGGAGACTCC...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGGGAGTCTCCATTCAGTaGGGCCCATGCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLGVSIQ*GPCCSL
Trigger: CAGGGAGCAGCATGGGCCCCACTGAATGGAGACTCC...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460129.5
ENST00000643662.1
CDS-3UTR TCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGATCACCGTGATGGCTaGCATCACCAAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFDHRDG*HHQARL
Trigger: AAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATC...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGGATCACCGTGATGGCTaGCATCACCAAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLDHRDG*HHQARL
Trigger: AAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATC...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATCCTCCACGTCCTCGTTaGGCTCCTCCTCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNPPRPR*APPPGS
Trigger: AGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGG...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GAGTGGGCTAGGGGAGTGAGGGTTCCGAGAAGGCCCAGGCAAGAACTGCCTGCATCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: EWARGVRVPRRPRQELPASLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...TGCAGGCAGTTCTTGCCTGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTTCACGACATTCAGGTaGTGCGCTCTTGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: MRAGGQARGSSAKATSPGFTTFR*CALEGP
Trigger: AGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAA...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR GCA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAGCGGACCGTGATGCCTaGCCGCTGGCACTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQADRDA*PLALAD
Trigger: ATCCGCAAGTGCCAGCGGGCAGGCATCACGGTCCGC...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGATCCTCATCCAATATaGCAACAGCTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGDPHPI*QQLRCC
Trigger: GCAGCATCTGAGCTGTTGGCATATTGGATGAGGATC...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGTGAGAGTGAGGGGGTaGATGTGTGCAAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: GGQARGSSAKATSPGCGWVRVRG*MCASIL
Trigger: AAGGATGCTTGCACACATGCACCCCCTCACTCTCAC...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR GCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCATGTCACCCATGTTTaGTGCGGTCCTTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLHVTHV*CGPCSG
Trigger: GCCCGAGCAAGGACCGCAGCAAACATGGGTGACATG...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTGTTTGGCTTTGCTCTaGCTGGCGTCCACATTGCCA +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACCLALL*LASTLP
Trigger: TGGCAATGTGGACGCCAGCCAGAGCAAAGCCAAACA...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CCA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGTCTTGTCTGAGCAGATaGCTGTGGCATTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: GGQARGSSAKATSPGCGWSCLSR*LWHCPW
Trigger: CCATGGGCAATGCCACAGCCATCTGCTCAGACAAGA...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCGTGCAGGCCCGTCGTTaGTCCCGTCCCCCGTCACGG +
Preference number: 4 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSVQARR*SRPPSR
Trigger: CCGTGACGGGGGACGGGACCAACGACGGGCCTGCAC...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCTGCCTGCGATGCCCATaGCGAAGCCCACGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: EKSSSSALQILASLGRMACLRCP*RSPRRP
Trigger: AGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCA...GGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGACGTTGACGGTGAGCTaGAACTGCAAGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRTLTVS*NCKNLE
Trigger: CTCCAAATTCTTGCAGTTCCAGCTCACCGTCAACGT...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGCGGAACCACAGGATCTaGCCCCGCCGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWRNHRI*PRRSSR
Trigger: GCGGGAGCTGCGGCGGGGCCAGATCCTGTGGTTCCG...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCATCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 4 (lower is better)
Translates to: SMRAGGQARGSSAKATSPSMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: SMRAGGQARGSSAKATSPRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: EKSSSSALQILASLGRMAGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...GGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGTGGTGGCGTTTGTACTaGAATCCAATAAGCACATCT +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRWWRLY*NPISTS
Trigger: AGATGTGCTTATTGGATTCCAGTACAAACGCCACCA...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGACGCGGATCTGTGTCTaGATCCGATTCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLTRICV*IRFRPR
Trigger: CCGAGGCCTGAATCGGATCCAGACACAGATCCGCGT...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000467702.3
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGCATTTCAGCATGGTTaGGGAAAAGAGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGAFQHG*GKEWLP
Trigger: TGGAAGCCACTCTTTTCCCCAACCATGCTGAAATGC...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCAAACCTTCAACAGGTaGGGTTTTGAGGCGCCGGCA +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLQTFNR*GFEAPA
Trigger: TGCCGGCGCCTCAAAACCTCACCTGTTGAAGGTTTG...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCGGTCATTGCCCTGGATaGAGAGGCCGTCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGGHCPG*RGRRQG
Trigger: TCCCTGCCGACGGCCTCTTCATCCAGGGCAATGACC...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATTGCGGATCCTCCTGTTaGACTCCTTGCCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNCGSSC*TPCPRG
Trigger: GCCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCA...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCATCATGGTCCTGGAGATaGGCGGCTTGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAASWSWR*AACCGR
Trigger: ACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGA...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGGATGGTGTAATGTTCTaGGGGTGGCGAATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLDGVMF*GWRMQG
Trigger: CCCCTGCATTCGCCACCCTCAGAACATTACACCATC...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCATTCACTCTCTCTTGCTaGACTCTGTGTCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: SMRAGGQARGSSAKATSPFTLSC*TLCPGF
Trigger: GAACCCTGGACACAGAGTTCAGCAAGAGAGAGTGAA...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGCAAACACAGCTATCCTaGTGTCATGGAACGAGGTCA +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEQTQLS*CHGTRS
Trigger: TGACCTCGTTCCATGACATCAGGATAGCTGTGTTTG...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCCAAGAGGCTGCCGGGTaGTGGCTGCTTGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGQEAAG*WLLVAV
Trigger: GACAGCCACAAGCAGCCATCACCCGGCAGCCTCTTG...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGAGCGCCAGGAGTCACTaGACGGGCTCCCTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VSVVRLIPLSMALLFLLRSARSH*TGSLPF
Trigger: GAAGGGCAGGGAGCCCGTTCAGTGACTCCTGGCGCT...CCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS-3UTR GCA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCACATCTCCATGGCGGCTaGCCCGTCCTGTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAAHLHGG*PVLLFG
Trigger: GCCAAACAACAGGACGGGGCAGCCGCCATGGAGATG...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGAGCACGTAGACGGGCGTaGACTCAGGCAGCCACGGCT +
Preference number: 4 (lower is better)
Translates to: VGRQVDPTVDGAVVLVEGARRRA*TQAATA
Trigger: AGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGC...TCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAACCTCTGGCATCTGGCTaGGCACGGGCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQPLASG*ARARSP
Trigger: AGGACTACGAGCCCGTGCGCAGCCAGATGCCAGAGG...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCTGTGTGAGCCTGCCTaGCTCCTTGAGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLLCEPA*LLEELE
Trigger: CTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAG...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VSVVRLIPLSMALLFLLRAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...CCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGGTTTGCTGCGGTCCTTaGTCGGGCTGGGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERVCCGP*SGWAQG
Trigger: CCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAAC...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCGAGCCCTCCATCACGTaGGTTCCTGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPEPSIT*VPDSSM
Trigger: CATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTC...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCCCCCGTCCTGTTGTTTaGCTTTGCTCTGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPPRPVV*LCSGWR
Trigger: ACGCCAGCCAGAGCAAAGCCAAACAACAGGACGGGG...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
60% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCCGGCTCCGGGCTGCTaGGGAAGTCGCGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWPAPGC*GSRGRP
Trigger: TGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGG...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGTATGCTTGTCCGTTaGGGAGGAGCGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNGMLVR*GGASQH
Trigger: GTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACC...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGATGCCTGCGATGCCCATaGCGAAGCCCACGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: VGRQVDPTVDGAVVLVEGCLRCP*RSPRRP
Trigger: AGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCA...TCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp AAAGCTCCGCCTGAGTTGCAAGAAGGAAACTCCTCAGAGCTCTCTCTGCTCACCCCGTGGGCGGCTCAGTaGCCAGTGCCAGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: KAPPELQEGNSSELSLLTPWAAQ*PVPARQ
Trigger: TTGCCTCGCTGGCACTGGCCACTGAGCCGCCCACGG...GGTGAGCAGAGAGAGCTCTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGCCGTGGGCGGCTCAGTaGCCAGTGCCAGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWPWAAQ*PVPARQ
Trigger: TTGCCTCGCTGGCACTGGCCACTGAGCCGCCCACGG...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGCAGCAGGGTCTCCGTaGGCGGCTCAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAAAGSP*AAQWPV
Trigger: CACTGGCCACTGAGCCGCCCACGGAGACCCTGCTGC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGATGCACCACATCCACTaGTCCAGCTGCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLMHHIH*SSCSGE
Trigger: CTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCAT...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGACGGAACCACAGGATCTaGCCCCGCCGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGRNHRI*PRRSSR
Trigger: GCGGGAGCTGCGGCGGGGCCAGATCCTGTGGTTCCG...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCCGGAACCACAGGATCTaGCCCCGCCGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIRNHRI*PRRSSR
Trigger: GCGGGAGCTGCGGCGGGGCCAGATCCTGTGGTTCCG...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTACTTCAATCTGTGTCTaGATCCGATTCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACTSICV*IRFRPR
Trigger: CCGAGGCCTGAATCGGATCCAGACACAGATTGAAGT...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCCCGAGAGGAAAGGTCCAGGAGGGAGAGCACCACAGGCATTACAAAACAGACTCTCACTGGTCAGCTGTaGCACCAGGCGGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: PREERSRRESTTGITKQTLTGQL*HQAADS
Trigger: GGAGTCGGCCGCCTGGTGCCACAGCTGACCAGTGAG...AGTCTGTTTTGTAATGCCTGTGGTGCTCTCCCTCCTGGACCTTTCCTCTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCCCTCCTCCCCCACCTaGGTTGGTATGATCTCTACA +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLPSSPT*VGMIST
Trigger: TGTAGAGATCATACCAACCCAGGTGGGGGAGGAGGG...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATCTACATGGTCAGGGGTaGTGGCTCCCCTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNLHGQG*WLPSTS
Trigger: AGACGTGGAGGGGAGCCACCACCCCTGACCATGTAG...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS-3UTR TCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGCACAGCCAGCTTGGTaGGCTTGCCCTGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPAQPAW*ACPAAR
Trigger: CCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGC...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGCACAGCCAGCTTGGTaGGCTTGCCCTGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAAQPAW*ACPAAR
Trigger: CCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGGCCAACGAGATGGTaGCGGCCAGAGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAARPTRW*RPEGAP
Trigger: AGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCT...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCGATGGCGCTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGTGCGGATCCTCCTGTTaGACTCCTTGCCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: SMALLFLLRDDGGLEFCLCGSSC*TPCPRG
Trigger: GCCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCA...CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTTGCGGATCCTCCTGTTaGACTCCTTGCCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFCGSSC*TPCPRG
Trigger: GCCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCA...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAATCATGGTCCTGGAGATaGGCGGCTTGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQSWSWR*AACCGR
Trigger: ACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGA...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGCTCTCCTAACCCAATaGATATGCACCACATCCACT +
Preference number: 4 (lower is better)
Translates to: SMRAGGQARGSSAKATSPALLTQ*ICTTST
Trigger: AGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGC...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGCTCTCCTAACCCAATaGATATGCACCACATCCACT +
Preference number: 4 (lower is better)
Translates to: GGQARGSSAKATSPGCGWALLTQ*ICTTST
Trigger: AGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGC...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCTCCACGTCCTCGTTaGGCTCCTCCTCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWPPRPR*APPPGS
Trigger: AGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGG...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCAGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAAVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTCGCTGTTGTTCTTGTTaGGGGATGACGGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSRCCSC*GMTAGS
Trigger: CGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCG...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TCGATGGCGCTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGCGCTGTTGTTCTTGTTaGGGGATGACGGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SMALLFLLRDDGGLEFCLRCCSC*GMTAGS
Trigger: CGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCG...CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTTGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 4 (lower is better)
Translates to: DALLKVLLPGGFCQVGWACRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATCCTCCTGGCTCCGAATaGACATGGAGCATGGTGTGC +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNPPGSE*TWSMVC
Trigger: GCACACCATGCTCCATGTTCATTCGGAGCCAGGAGG...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGCACCGGGTCCTCGATaGCCACCACGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAAPGPR*PPRRCR
Trigger: CCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGCGGACCGTGATGCCTaGCCGCTGGCACTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPADRDA*PLALAD
Trigger: ATCCGCAAGTGCCAGCGGGCAGGCATCACGGTCCGC...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCCTTTAACCAGGGTATaGTTGTCCGTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLPLTRV*LSVGEE
Trigger: CTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGG...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGTCGGCCTTCTTGAGTaGAGGCCCGTCGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: VSVVRLIPLSMALLFLLRVGLLE*RPVVGP
Trigger: GGGACCAACGACGGGCCTGCACTCAAGAAGGCCGAC...CCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp CCCCGAGAGGAAAGGTCCAGGAGGGAGAGCACCACAGGCATTACAAAACAGACTGTCGGCCTTCTTGAGTaGAGGCCCGTCGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PREERSRRESTTGITKQTVGLLE*RPVVGP
Trigger: GGGACCAACGACGGGCCTGCACTCAAGAAGGCCGAC...AGTCTGTTTTGTAATGCCTGTGGTGCTCTCCCTCCTGGACCTTTCCTCTCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATTTCACCCAGAGCATCTaGACGGCCTTCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNFTQSI*TAFRGE
Trigger: CTCCCCTCTGAAGGCCGTGCAGATGCTCTGGGTGAA...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTGGGGTTCCGGAAGATaGCGTCAAAGACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFWGSGR*RQRHCA
Trigger: AGCGCAATGTCTTTGACGGCATCTTCCGGAACCCCA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCGATGGCGCTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: SMALLFLLRDDGGLEFCLGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGTCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: GSMRAGGQARGSSAKATSLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...AGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGAGGGGGTGCATGTGTaGAAGCATCCTTCATTCCTG +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLEGVHV*KHPSFL
Trigger: CAGGAATGAAGGATGCTTGCACACATGCACCCCCTC...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGTTTGCTGCGGTCCTTaGTCGGGCTGGGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAVCCGP*SGWAQG
Trigger: CCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAAC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCAAATTGTATGGCTGGTaGCAGATGAGACACCCAAGT +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVKLYGW*QMRHPS
Trigger: ACTTGGGTGTCTCATCTGGCACCAGCCATACAATTT...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGAAGTTCAGCTCGTCTaGTTGGGGGTTCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLEVQLV*LGVHSP
Trigger: TGGACTGTGAACCCCCAAGCAGACGAGCTGAACTTC...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646379.1
CDS-3UTR CCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCCCGAACTCGCCCCCATaGCTCGACTCATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPPNSPP*LDSFLW
Trigger: CCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCATCCTCTGCCCCACCCTaGGCCGTCGCACATCCTTCG +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPSSAPP*AVAHPS
Trigger: CGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGA...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGGCGCCCTCCTTCTCTaGGGGCAGAATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: LCRSWHPWAGWPLVLQTQGALLL*GQNLGG
Trigger: ACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCC...CTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTGGCGCCCTCCTTCTCTaGGGGCAGAATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFGALLL*GQNLGG
Trigger: ACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCC...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGGCTTCTGGGACCTCTaGCCGCACCGGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAGFWDL*PHRVLD
Trigger: ATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAGCC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCACTTGCGGATGGCTTCTaGGACCTCTGGCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPLADGF*DLWPHR
Trigger: CCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAG...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCGATGGCGCTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGGGTATGCTTGTCCGTTaGGGAGGAGCGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SMALLFLLRDDGGLEFCLGMLVR*GGASQH
Trigger: GTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACC...CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCTGCCTGCGATGCCCATaGCGAAGCCCACGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAACLRCP*RSPRRP
Trigger: AGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCA...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTACGTTGACGGTGAGCTaGAACTGCAAGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACTLTVS*NCKNLE
Trigger: CTCCAAATTCTTGCAGTTCCAGCTCACCGTCAACGT...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCCGTGGGCGGCTCAGTaGCCAGTGCCAGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWPWAAQ*PVPARQ
Trigger: TTGCCTCGCTGGCACTGGCCACTGAGCCGCCCACGG...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAGCAGCAGGGTCTCCGTaGGCGGCTCAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREAAGSP*AAQWPV
Trigger: CACTGGCCACTGAGCCGCCCACGGAGACCCTGCTGC...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTCCCTGGACTTGAAGAGGTAGCTGATTTGCTTGTGTCGGTCGTCAGGTTGATCGCAGCAGGGTCTCCGTaGGCGGCTCAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LPGLEEVADLLVSVVRLIAAGSP*AAQWPV
Trigger: CACTGGCCACTGAGCCGCCCACGGAGACCCTGCTGC...GATCAACCTGACGACCGACACAAGCAAATCAGCTACCTCTTCAAGTCCAGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGGCAGCAGGGTCTCCGTaGGCGGCTCAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMAAGSP*AAQWPV
Trigger: CACTGGCCACTGAGCCGCCCACGGAGACCCTGCTGC...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCATCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAASPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCAACTCGGTAGCATTTaGCTTCTGCCTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLQLGSI*LLPEPL
Trigger: GAGAGGCTCAGGCAGAAGCCAAATGCTACCGAGTTG...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGAGCACATCTGAGGGCTaGTCACCCCTTTGGTTATGC +
Preference number: 4 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLSTSEG*SPLWLC
Trigger: GCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCT...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CCA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGGTGGGCTGGCTTTGGTaGCGTTTGTACTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLVGWLW*RLYWNP
Trigger: TGGATTCCAGTACAAACGCCACCAAAGCCAGCCCAC...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGAGGTGTCCTCCGGTGTaGGACGAGGTCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVRCPPV*DEVQGP
Trigger: CGGCCCCTGGACCTCGTCCCACACCGGAGGACACCT...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCCATCACGTGGGTTCCTaGCAGCAGCATGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGHHVGS*QQHGVL
Trigger: AAGGACCCCATGCTGCTGTCAGGAACCCACGTGATG...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGCCACGGCTTCTTGTTaGCCACGAAGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: EKSSSSALQILASLGRMAATASC*PRRCPQ
Trigger: CTGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGC...GGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGTGCGGATCCTCCTGTTaGACTCCTTGCCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERCGSSC*TPCPRG
Trigger: GCCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCA...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGATGGTGTAATGTTCTaGGGGTGGCGAATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNDGVMF*GWRMQG
Trigger: CCCCTGCATTCGCCACCCTCAGAACATTACACCATC...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ATTCTGCAGCGCCAGGAGTCACTGAACGGGCTCCCTGCCCTTCCCTCATCTGTTGCAGTGGAGAGCAGCTaGATGGCTTCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: ILQRQESLNGLPALPSSVAVESS*MASLQT
Trigger: AGTTTGGAGGGAAGCCATTCAGCTGCTCTCCACTGC...AACAGATGAGGGAAGGGCAGGGAGCCCGTTCAGTGACTCCTGGCGCTGCAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGCCTCCACGTCCTCGTTaGGCTCCTCCTCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWPPRPR*APPPGS
Trigger: AGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGG...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 4 (lower is better)
Translates to: SMRAGGQARGSSAKATSPIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCGCTGTTGTTCTTGTTaGGGGATGACGGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWRCCSC*GMTAGS
Trigger: CGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCG...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGCCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 4 (lower is better)
Translates to: GGQARGSSAKATSPGCGWPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATCATTTGGCTTCTGCCTaGGCCTCTCACGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNHLASA*ASHGSD
Trigger: GTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATG...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCACCTCCAAAGATGAGTaGTTCTGCAGCGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPTSKDE*FCSARS
Trigger: ACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGT...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGTCCCTTATTCCTCCTaGGGTCACTGGACCCTGAAG +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNVPYSS*GHWTLK
Trigger: CTTCAGGGTCCAGTGACCTCAGGAGGAATAAGGGAC...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467702.3
CDS-3UTR GCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTCGCACATCCTTCGTTaGCCTCGCCGGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGSHILR*PRRAGG
Trigger: ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGA...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAATCGCACATCCTTCGTTaGCCTCGCCGGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAARESHILR*PRRAGG
Trigger: ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGA...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGCCCCTCGATCCAACCTaGCTCTGCCTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LCRSWHPWAGWPLVLQTQPLDPT*LCLSFI
Trigger: GATGAAGGAGAGGCAGAGGCAGGTTGGATCGAGGGG...CTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGTAAATTTCTGTTCCTaGTCGATGCGGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLVNFCS*SMRLCR
Trigger: CCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTAC...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAGCACGTAGACGGGCGTaGACTCAGGCAGCCACGGCT +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGARRRA*TQAATA
Trigger: AGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGC...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCCCTCTGGCATCTGGCTaGGCACGGGCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSPLASG*ARARSP
Trigger: AGGACTACGAGCCCGTGCGCAGCCAGATGCCAGAGG...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGACCCCCTTGCTGTACATaGGGAAGCTCTCGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: VGRQVDPTVDGAVVLVEGPPCCT*GSSRRA
Trigger: TGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGG...TCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCAGTCCGGCTCCGGGCTaGTGGGGAAGTCGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFSPAPG*WGSRGR
Trigger: CCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACT...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGAGTCCGGCTCCGGGCTaGTGGGGAAGTCGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWSPAPG*WGSRGR
Trigger: CCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACT...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCGCACCGGGTCCTCGATaGCCACCACGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLAPGPR*PPRRCR
Trigger: CCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGC...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCACCGGGTCCTCGATaGCCACCACGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIAPGPR*PPRRCR
Trigger: CCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGC...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAGCACCGGGTCCTCGATaGCCACCACGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREAPGPR*PPRRCR
Trigger: CCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGC...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGTTGTCAATTCGCTCCTaGTCAATCTCCCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLLSIRS*SISPFS
Trigger: CGAGAAGGGGGAGATTGAGCAGGAGCGAATTGACAA...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGTCACGGCCACCACCTaGCGCTGCTCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWVTATT*RCSVCV
Trigger: CACACACACTGAGCAGCGGCAGGTGGTGGCCGTGAC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGTCGGCCTTCTTGAGTaGAGGCCCGTCGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAVGLLE*RPVVGP
Trigger: GGGACCAACGACGGGCCTGCACTCAAGAAGGCCGAC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAGGCCACGTCAGTGCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREGHVSA*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCC...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCGGCCACGTCAGTGCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLGHVSA*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCC...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGCGGCTCAGTGGCCAGTaGCAGCGAGGCAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWRLSGQ*QRGKRV
Trigger: GACACGTTTGCCTCGCTGGCACTGGCCACTGAGCCG...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGCGGCTCAGTGGCCAGTaGCAGCGAGGCAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWRLSGQ*QRGKRV
Trigger: GACACGTTTGCCTCGCTGGCACTGGCCACTGAGCCG...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCCGGCTCAGTGGCCAGTaGCAGCGAGGCAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAARLSGQ*QRGKRV
Trigger: GACACGTTTGCCTCGCTGGCACTGGCCACTGAGCCG...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGGCTTCCCTCCAAACTaGACGATCACTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLGFPPN*TITIWM
Trigger: CATCCAGATAGTGATCGTGCAGTTTGGAGGGAAGCC...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: VSVVRLIPLSMALLFLLRGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...CCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QDATQGKCLLGRAVFIASAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGTTTGCTGCGGTCCTTaGTCGGGCTGGGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIVCCGP*SGWAQG
Trigger: CCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAAC...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGTCCTCTGCCCCACCCTaGGCCGTCGCACATCCTTCG +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPSSAPP*AVAHPS
Trigger: CGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGA...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGGGGATCTGGACCACCTaGCCAGCCCGGACCACGGTA +
Preference number: 4 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVGIWTT*PARTTV
Trigger: TACCGTGGTCCGGGCTGGCCAGGTGGTCCAGATCCC...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAGGGATCTGGACCACCTaGCCAGCCCGGACCACGGTA +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGGIWTT*PARTTV
Trigger: TACCGTGGTCCGGGCTGGCCAGGTGGTCCAGATCCC...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCCCTTCTTGTGCATGCTaGCCTTCTTCCTGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPPSCAC*PSSCRQ
Trigger: CTGACGACAGGAAGAAGGCCAGCATGCACAAGAAGG...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGGCGCCCTCCTTCTCTaGGGGCAGAATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VSVVRLIPLSMALLFLLRGALLL*GQNLGG
Trigger: ACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCC...CCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGTACAACTTCTCCTCTaGCATCTGGCTGCGCACGGG +
Preference number: 4 (lower is better)
Translates to: ALQILASLGRMAVSVANPVQLLL*HLAAHG
Trigger: CCCGTGCGCAGCCAGATGCCAGAGGAGAAGTTGTAC...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGGGCTTCTGGGACCTCTaGCCGCACCGGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWGFWDL*PHRVLD
Trigger: ATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAGCC...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTCTTGCGGATGGCTTCTaGGACCTCTGGCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTLADGF*DLWPHR
Trigger: CCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAG...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGCTTGCGGATGGCTTCTaGGACCTCTGGCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPLADGF*DLWPHR
Trigger: CCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAG...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTTGCGGATGGCTTCTaGGACCTCTGGCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWLADGF*DLWPHR
Trigger: CCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAG...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGACTTGCGGATGGCTTCTaGGACCTCTGGCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGLADGF*DLWPHR
Trigger: CCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAG...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGTGCAGGCCCGTCGTTaGTCCCGTCCCCCGTCACGG +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGVQARR*SRPPSR
Trigger: CCGTGACGGGGGACGGGACCAACGACGGGCCTGCAC...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCAGGCCCGTCGTTaGTCCCGTCCCCCGTCACGG +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWVQARR*SRPPSR
Trigger: CCGTGACGGGGGACGGGACCAACGACGGGCCTGCAC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTGCCTGCGATGCCCATaGCGAAGCCCACGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGCLRCP*RSPRRP
Trigger: AGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCA...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCGTGGGCGGCTCAGTaGCCAGTGCCAGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSPWAAQ*PVPARQ
Trigger: TTGCCTCGCTGGCACTGGCCACTGAGCCGCCCACGG...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCCGTGGGCGGCTCAGTaGCCAGTGCCAGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSPWAAQ*PVPARQ
Trigger: TTGCCTCGCTGGCACTGGCCACTGAGCCGCCCACGG...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATCCGTGGGCGGCTCAGTaGCCAGTGCCAGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYPWAAQ*PVPARQ
Trigger: TTGCCTCGCTGGCACTGGCCACTGAGCCGCCCACGG...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCAGCAGGGTCTCCGTaGGCGGCTCAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAAAGSP*AAQWPV
Trigger: CACTGGCCACTGAGCCGCCCACGGAGACCCTGCTGC...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTCGGAACCACAGGATCTaGCCCCGCCGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGRNHRI*PRRSSR
Trigger: GCGGGAGCTGCGGCGGGGCCAGATCCTGTGGTTCCG...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTTCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: DALLKVLLPGGFCQVGWASPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGTTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAAGATCCTGGCATCCTTaGGCCGGATGGCCGTTAGTG +
Preference number: 4 (lower is better)
Translates to: ALQILASLGRMAVSVANPRSWHP*AGWPLV
Trigger: CACTAACGGCCATCCGGCCCAAGGATGCCAGGATCT...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCGAATGGCTTTCTGTTTaGGAAAGCAAGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVEWLSV*ESKTCC
Trigger: ACAGCAAGTCTTGCTTTCCCAAACAGAAAGCCATTC...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCGCAGTGGGCTGGCTTTaGTGGCGTTTGTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPAVGWL*WRLYWN
Trigger: ATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGC...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAAAGGTGTCCTCCGGTGTaGGACGAGGTCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: VMERGHGHMTDQRSGEMERCPPV*DEVQGP
Trigger: CGGCCCCTGGACCTCGTCCCACACCGGAGGACACCT...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTCACTGGTCAGCTGTaGCACCAGGCGGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWLTGQL*HQAADS
Trigger: GGAGTCGGCCGCCTGGTGCCACAGCTGACCAGTGAG...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGATCAGCACACCCTCACTaGTCAGCTGTGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: VGRQVDPTVDGAVVLVEGSAHPH*SAVAPG
Trigger: GCCTGGTGCCACAGCTGACCAGTGAGGGTGTGCTGA...TCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCCCAAGGGTCAGCGCTaGACAAGAGGCTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLPKGQR*TRGCRV
Trigger: CACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGG...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCCATGAGCCTGGCCCGTaGCTGGCCCTCGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIHEPGP*LALGSP
Trigger: AGGAGAACCGAGGGCCAGCCACGGGCCAGGCTCATG...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467702.3
3UTR CAA 72 bp GGACACAATGGCAGGAGAGAGATTTGGGTGGGAGGCTaGTCAGAATGCACCAGGTTGGCAGCCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GHNGRREIWVGG*SECTRLAASCR
Trigger: CCTGCAGGAGGCTGCCAACCTGGTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CAA 72 bp GGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATaGTTTTCAGTGGAGGGGGTGATGGCTGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GLRRAVPKQPPI*FSVEGVMAAAW
Trigger: CCAGGCAGCAGCCATCACCCCCTCCACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CAA 72 bp TCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTC +
Preference number: 4 (lower is better)
Translates to: SVVRLIPLSMAL*FLLRDDGGLEF
Trigger: GAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCGACCACACAGATAACTaGGAGGAGAATGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSDHTDN*EENGGP
Trigger: GGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTC...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR TCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGCACAGCCAGCTTGGTaGGCTTGCCCTGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFAQPAW*ACPAAR
Trigger: CCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTGCACAGCCAGCTTGGTaGGCTTGCCCTGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFAQPAW*ACPAAR
Trigger: CCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGC...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATAGGCCAACGAGATGGTaGCGGCCAGAGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYRPTRW*RPEGAP
Trigger: AGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCT...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATCCACGTCGGCCTTCTTaGGTGCAGGCCCGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYPRRPS*VQARRW
Trigger: CCAACGACGGGCCTGCACTCAAGAAGGCCGACGTGG...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCACGTCGGCCTTCTTaGGTGCAGGCCCGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSPRRPS*VQARRW
Trigger: CCAACGACGGGCCTGCACTCAAGAAGGCCGACGTGG...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCCACGTCGGCCTTCTTaGGTGCAGGCCCGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: SLREKSSSSALQILASLGPRRPS*VQARRW
Trigger: CCAACGACGGGCCTGCACTCAAGAAGGCCGACGTGG...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAACCACGTCGGCCTTCTTaGGTGCAGGCCCGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: FSRVALILFVEEFSGPGEPRRPS*VQARRW
Trigger: CCAACGACGGGCCTGCACTCAAGAAGGCCGACGTGG...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTCCACGTCGGCCTTCTTaGGTGCAGGCCCGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFPRRPS*VQARRW
Trigger: CCAACGACGGGCCTGCACTCAAGAAGGCCGACGTGG...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTGCAGTGGAGAGCAGCTaGATGGCTTCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFAVESS*MASLQT
Trigger: AGTTTGGAGGGAAGCCATTCAGCTGCTCTCCACTGC...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCACGCTGTTGTTCTTGTTaGGGGATGACGGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPRCCSC*GMTAGS
Trigger: CGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCG...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 4 (lower is better)
Translates to: MRAGGQARGSSAKATSPGKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGACAGGTGATGCGCTCTTaGAGGTCCTCCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: VGRQVDPTVDGAVVLVEGQVMRS*RSSFQE
Trigger: CTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTG...TCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR TCA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTGACAAGGGGCCATGGTaGGGGGTTGGCGGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: QDATQGKCLLGRAVFIASDKGPW*GVGGSN
Trigger: ATTGCTCCCGCCAACCCCTCACCATGGCCCCTTGTC...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAAGTGGGCTAGGGGAGTaGGGGTTCCGAGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGSGLGE*GFREGP
Trigger: TGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACT...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCACCAGGTCTGGAGCGGTaGCCGGCAAACCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPPGLER*PANLQQ
Trigger: CTGTTGAAGGTTTGCCGGGCACCGCTCCAGACCTGG...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCCCAGGTCTGGAGCGGTaGCCGGCAAACCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAPGLER*PANLQQ
Trigger: CTGTTGAAGGTTTGCCGGGCACCGCTCCAGACCTGG...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCATCGCACATCCTTCGTTaGCCTCGCCGGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIASHILR*PRRAGG
Trigger: ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGA...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGCATCTCCATGGCGGCTaGCCCGTCCTGTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWHLHGG*PVLLFG
Trigger: GCCAAACAACAGGACGGGGCAGCCGCCATGGAGATG...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCCATCTCCATGGCGGCTaGCCCGTCCTGTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAHLHGG*PVLLFG
Trigger: GCCAAACAACAGGACGGGGCAGCCGCCATGGAGATG...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAACCCGCCTTCCCGATCTaGACAGCCAGCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREPAFPI*TASLVS
Trigger: GCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGG...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCCCCGCCTTCCCGATCTaGACAGCCAGCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIPAFPI*TASLVS
Trigger: GCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGG...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCACCTGTACCACTGTCATaGGATTGGTGGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: ALQILASLGRMAVSVANPPVPLS*DWWSAC
Trigger: GCACGCTGACCACCAATCGCATGACAGTGGTACAGG...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTCCCCCTTGCTGTACATaGGGAAGCTCTCGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMAPPCCT*GSSRRA
Trigger: TGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGG...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGCACCGGGTCCTCGATaGCCACCACGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWAPGPR*PPRRCR
Trigger: CCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTGCACCGGGTCCTCGATaGCCACCACGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSAPGPR*PPRRCR
Trigger: CCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGC...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGCGGACCGTGATGCCTaGCCGCTGGCACTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFADRDA*PLALAD
Trigger: ATCCGCAAGTGCCAGCGGGCAGGCATCACGGTCCGC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAGTCGGCCTTCTTGAGTaGAGGCCCGTCGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREVGLLE*RPVVGP
Trigger: GGGACCAACGACGGGCCTGCACTCAAGAAGGCCGAC...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGGCCACGTCAGTGCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAGHVSA*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCC...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTGGCCACGTCAGTGCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSGHVSA*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCC...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACCGGCTCAGTGGCCAGTaGCAGCGAGGCAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYRLSGQ*QRGKRV
Trigger: GACACGTTTGCCTCGCTGGCACTGGCCACTGAGCCG...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGCGGCTCAGTGGCCAGTaGCAGCGAGGCAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPRLSGQ*QRGKRV
Trigger: GACACGTTTGCCTCGCTGGCACTGGCCACTGAGCCG...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CTCCCTGGACTTGAAGAGGTAGCTGATTTGCTTGTGTCGGTCGTCAGGTTGATCCGGCTCAGTGGCCAGTaGCAGCGAGGCAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: LPGLEEVADLLVSVVRLIRLSGQ*QRGKRV
Trigger: GACACGTTTGCCTCGCTGGCACTGGCCACTGAGCCG...GATCAACCTGACGACCGACACAAGCAAATCAGCTACCTCTTCAAGTCCAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCGGCTTCCCTCCAAACTaGACGATCACTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPGFPPN*TITIWM
Trigger: CATCCAGATAGTGATCGTGCAGTTTGGAGGGAAGCC...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAATGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHERKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: WVPGWMGARKAGGSGVHETETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCGGAAACAAGGCAACATaGCGGCAAAGAAACTTTATA +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVGNKAT*RQRNFI
Trigger: TATAAAGTTTCTTTGCCGGCATGTTGCCTTGTTTCC...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTCACCCCTTTGGTTATaGAGTTCCTCTCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFSPLWL*SSSPGY
Trigger: GTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CCCCGAGAGGAAAGGTCCAGGAGGGAGAGCACCACAGGCATTACAAAACAGACTATTCAGTGGGGCCCATaGTGCTCCCTGGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: PREERSRRESTTGITKQTIQWGP*CSLELA
Trigger: TGCCAGTTCCAGGGAGCAGCATGGGCCCCACTGAAT...AGTCTGTTTTGTAATGCCTGTGGTGCTCTCCCTCCTGGACCTTTCCTCTCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGCTGCCGGGTGATGGCTaGTTGTGGCTGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWLPGDG*LWLSSA
Trigger: TGCTGAGGACAGCCACAAGCAGCCATCACCCGGCAG...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGCGCTGGACAAGAGGCTaGCGGGTGATGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWRWTRG*RVMAAC
Trigger: ACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCG...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGTTTGCTGCGGTCCTTaGTCGGGCTGGGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFVCCGP*SGWAQG
Trigger: CCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAAC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GAGTGGGCTAGGGGAGTGAGGGTTCCGAGAAGGCCCAGGCAAGAACTGCCTGCACTCTTGTCATCTCTATaGTATGGTTGGGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: EWARGVRVPRRPRQELPALLSSL*YGWDKG
Trigger: CCCCTTGTCCCAACCATAGCATAGAGATGACAAGAG...TGCAGGCAGTTCTTGCCTGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGGGAGGCTTGTCAGAATaGACCAGGTTGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERGGLSE*TRLAAS
Trigger: GGAGGCTGCCAACCTGGTGCATTCTGACAAGCCTCC...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTTCCTCTGCCCCACCCTaGGCCGTCGCACATCCTTCG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFSSAPP*AVAHPS
Trigger: CGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGA...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTTCCTCTGCCCCACCCTaGGCCGTCGCACATCCTTCG +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSSSAPP*AVAHPS
Trigger: CGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGA...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCAGGGATCTGGACCACCTaGCCAGCCCGGACCACGGTA +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSGIWTT*PARTTV
Trigger: TACCGTGGTCCGGGCTGGCCAGGTGGTCCAGATCCC...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGGGGATCTGGACCACCTaGCCAGCCCGGACCACGGTA +
Preference number: 4 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMGIWTT*PARTTV
Trigger: TACCGTGGTCCGGGCTGGCCAGGTGGTCCAGATCCC...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGGGATCTGGACCACCTaGCCAGCCCGGACCACGGTA +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWGIWTT*PARTTV
Trigger: TACCGTGGTCCGGGCTGGCCAGGTGGTCCAGATCCC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATATCAGCCACAGGGATCTaGACCACCTGGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: NIQDATQGKCLLGRAVFISATGI*TTWPAR
Trigger: CCGGGCTGGCCAGGTGGTCCAGATCCCTGTGGCTGA...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTTCAGCCACAGGGATCTaGACCACCTGGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFSATGI*TTWPAR
Trigger: CCGGGCTGGCCAGGTGGTCCAGATCCCTGTGGCTGA...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCATCTTGTCTGAGCAGATaGCTGTGGCATTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAASCLSR*LWHCPW
Trigger: CCATGGGCAATGCCACAGCCATCTGCTCAGACAAGA...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp AGAACCAAATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAACCGGCTCCGGGCTGCTaGGGAAGTCGCGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: RTKSATYSWSPCLEDRKEPAPGC*GSRGRP
Trigger: TGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGG...TTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTCCGGCTCCGGGCTGCTaGGGAAGTCGCGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVPAPGC*GSRGRP
Trigger: TGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGG...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGGGCTTCTGGGACCTCTaGCCGCACCGGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMGFWDL*PHRVLD
Trigger: ATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAGCC...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTGGCTTCTGGGACCTCTaGCCGCACCGGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSGFWDL*PHRVLD
Trigger: ATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAGCC...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGGCTTCTGGGACCTCTaGCCGCACCGGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWGFWDL*PHRVLD
Trigger: ATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAGCC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGTGATGCCTGCCCGCTaGCACTTGCGGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAVMPAR*HLRMAS
Trigger: AGAAGCCATCCGCAAGTGCCAGCGGGCAGGCATCAC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGTGATGCCTGCCCGCTaGCACTTGCGGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWVMPAR*HLRMAS
Trigger: AGAAGCCATCCGCAAGTGCCAGCGGGCAGGCATCAC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGGTATGCTTGTCCGTTaGGGAGGAGCGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWGMLVR*GGASQH
Trigger: GTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATCCAGGATGCAACCCAGGGTGCAGGCCCGTCGTTaGTCCCGTCCCCCGTCACGG +
Preference number: 4 (lower is better)
Translates to: SRQKSEHGYHKTSRMQPRVQARR*SRPPSR
Trigger: CCGTGACGGGGGACGGGACCAACGACGGGCCTGCAC...CCTGGGTTGCATCCTGGATGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGGTGCAGGCCCGTCGTTaGTCCCGTCCCCCGTCACGG +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSVQARR*SRPPSR
Trigger: CCGTGACGGGGGACGGGACCAACGACGGGCCTGCAC...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCAGTGCAGGCCCGTCGTTaGTCCCGTCCCCCGTCACGG +
Preference number: 4 (lower is better)
Translates to: CVQASFIPDKRRPTLMLAVQARR*SRPPSR
Trigger: CCGTGACGGGGGACGGGACCAACGACGGGCCTGCAC...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTGTGCAGGCCCGTCGTTaGTCCCGTCCCCCGTCACGG +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCVQARR*SRPPSR
Trigger: CCGTGACGGGGGACGGGACCAACGACGGGCCTGCAC...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGTGCCTGCGATGCCCATaGCGAAGCCCACGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMCLRCP*RSPRRP
Trigger: AGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCA...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTGCAGCAGGGTCTCCGTaGGCGGCTCAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLAAGSP*AAQWPV
Trigger: CACTGGCCACTGAGCCGCCCACGGAGACCCTGCTGC...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGCAGCAGGGTCTCCGTaGGCGGCTCAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWAAGSP*AAQWPV
Trigger: CACTGGCCACTGAGCCGCCCACGGAGACCCTGCTGC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATCGATCACTATCTGGATaGCAAAGGTGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNRSLSG*QRCPAR
Trigger: TCGTGCTGGGCACCTTTGCCATCCAGATAGTGATCG...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCCGGAACCACAGGATCTaGCCCCGCCGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCRNHRI*PRRSSR
Trigger: GCGGGAGCTGCGGCGGGGCCAGATCCTGTGGTTCCG...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCCGGAACCACAGGATCTaGCCCCGCCGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCRNHRI*PRRSSR
Trigger: GCGGGAGCTGCGGCGGGGCCAGATCCTGTGGTTCCG...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTAGATTGGCTACATCCTaGCTCTGGCTGGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: DALLKVLLPGGFCQVGWARLATS*LWLVTE
Trigger: CTCGGTCACCAGCCAGAGCCAGGATGTAGCCAATCT...AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp CTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: LCRSWHPWAGWPLVLQTQRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...CTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGTCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERSPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCTGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SLREKSSSSALQILASLGGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTTTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACTTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGCACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATCAACTCGGTAGCATTTaGCTTCTGCCTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNQLGSI*LLPEPL
Trigger: GAGAGGCTCAGGCAGAAGCCAAATGCTACCGAGTTG...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTCATCCTTGGGCCGGATaGCCGTTAGTGTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFHPWAG*PLVLQT
Trigger: GGTTTGCAACACTAACGGCCATCCGGCCCAAGGATG...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGCATCCTTGGGCCGGATaGCCGTTAGTGTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: LCRSWHPWAGWPLVLQTQHPWAG*PLVLQT
Trigger: GGTTTGCAACACTAACGGCCATCCGGCCCAAGGATG...CTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCATGTAGGGTTTCAGAATaGCTTTCTGTTTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SMRAGGQARGSSAKATSPCRVSE*LSVWES
Trigger: GCTTTCCCAAACAGAAAGCCATTCTGAAACCCTACA...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCTGTGGAAGAGTTCTCTaGGCCTGGAGAAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGCGRVL*AWRREG
Trigger: CCCTTCCCTTCTCCAGGCCCAGAGAACTCTTCCACA...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGGAGTCTCCATTCAGTaGGGCCCATGCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWGVSIQ*GPCCSL
Trigger: CAGGGAGCAGCATGGGCCCCACTGAATGGAGACTCC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATCTCACTGGTCAGCTGTaGCACCAGGCGGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYLTGQL*HQAADS
Trigger: GGAGTCGGCCGCCTGGTGCCACAGCTGACCAGTGAG...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCATCAGCACACCCTCACTaGTCAGCTGTGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPSAHPH*SAVAPG
Trigger: GCCTGGTGCCACAGCTGACCAGTGAGGGTGTGCTGA...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAACCCAAGGGTCAGCGCTaGACAAGAGGCTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: FSRVALILFVEEFSGPGEPKGQR*TRGCRV
Trigger: CACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGG...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCCAAGGGTCAGCGCTaGACAAGAGGCTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSPKGQR*TRGCRV
Trigger: CACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGG...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGAGAAGGCAGCCAATCCTaGACTGGCCCCAAACGAGCT +
Preference number: 4 (lower is better)
Translates to: VGRQVDPTVDGAVVLVEGEGSQS*TGPKRA
Trigger: AGCTCGTTTGGGGCCAGTCCAGGATTGGCTGCCTTC...TCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467702.3
3UTR CAA 72 bp AGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RLIPLSMALLFL*RDDGGLEFCLS
Trigger: GCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
3UTR CAA 72 bp GTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VRLIPLSMALLF*LRDDGGLEFCL
Trigger: CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAGGTCACCATATTTaGCCTGGGCTATGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ALQILASLGRMAVSVANPGGHHI*PGLCPQ
Trigger: TTGGGGACATAGCCCAGGTCAAATATGGTGACCTCC...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR TCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGGTCATTGCCCTGGATaGAGAGGCCGTCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWGHCPG*RGRRQG
Trigger: TCCCTGCCGACGGCCTCTTCATCCAGGGCAATGACC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGCACCAACATCCGTCCTaGGCCCTCCATCACGTGGGT +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMHQHPS*ALHHVG
Trigger: ACCCACGTGATGGAGGGCTCAGGACGGATGTTGGTG...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCCACCAACATCCGTCCTaGGCCCTCCATCACGTGGGT +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIHQHPS*ALHHVG
Trigger: ACCCACGTGATGGAGGGCTCAGGACGGATGTTGGTG...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGCACAGCCAGCTTGGTaGGCTTGCCCTGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGAQPAW*ACPAAR
Trigger: CCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGC...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGGCACAGCCAGCTTGGTaGGCTTGCCCTGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSAQPAW*ACPAAR
Trigger: CCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGC...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCGATCACCGTGATGGCTaGCATCACCAAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSDHRDG*HHQARL
Trigger: AAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATC...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGAGGCCAACGAGATGGTaGCGGCCAGAGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSRPTRW*RPEGAP
Trigger: AGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCT...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGAGGCCAACGAGATGGTaGCGGCCAGAGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWRPTRW*RPEGAP
Trigger: AGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCT...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGTGCGGATCCTCCTGTTaGACTCCTTGCCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPCGSSC*TPCPRG
Trigger: GCCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCA...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGCGGATCCTCCTGTTaGACTCCTTGCCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGCGSSC*TPCPRG
Trigger: GCCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCA...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTTGCGGATCCTCCTGTTaGACTCCTTGCCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTCGSSC*TPCPRG
Trigger: GCCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCA...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAATCATGGTCCTGGAGATaGGCGGCTTGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAARESWSWR*AACCGR
Trigger: ACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGA...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGAGCAGTGGAGAGCAGCTaGATGGCTTCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: VGRQVDPTVDGAVVLVEGAVESS*MASLQT
Trigger: AGTTTGGAGGGAAGCCATTCAGCTGCTCTCCACTGC...TCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCACCTCCACGTCCTCGTTaGGCTCCTCCTCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAPPRPR*APPPGS
Trigger: AGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGG...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACCCTCCACGTCCTCGTTaGGCTCCTCCTCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHPPRPR*APPPGS
Trigger: AGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGG...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTCCTCCACGTCCTCGTTaGGCTCCTCCTCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFPPRPR*APPPGS
Trigger: AGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGG...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCATTCACTCTCTCTTGCTaGACTCTGTGTCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAAFTLSC*TLCPGF
Trigger: GAACCCTGGACACAGAGTTCAGCAAGAGAGAGTGAA...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGCGCTGTTGTTCTTGTTaGGGGATGACGGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPRCCSC*GMTAGS
Trigger: CGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCG...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGTGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMCRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCCATTTGGCTTCTGCCTaGGCCTCTCACGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSHLASA*ASHGSD
Trigger: GTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATG...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCATCCAATAAGCACATCTaGGGGCTGGTCACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: ALQILASLGRMAVSVANPSNKHI*GLVTPL
Trigger: CAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGA...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAGAGGTCACGGACACATaGCTGATCAAAGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQEVTDT*LIKEVG
Trigger: CCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTC...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTTACCCCCTAATGGAGTaGACTGCCAAACGTACCCCA +
Preference number: 4 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFYPLME*TAKRTP
Trigger: TGGGGTACGTTTGGCAGTTCACTCCATTAGGGGGTA...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCAGGTGGCTCTTGGCTATaGAAATCACCACCAATCCTG +
Preference number: 4 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAAGGSWL*KSPPIL
Trigger: CAGGATTGGTGGTGATTTTCATAGCCAAGAGCCACC...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643662.1
CDS-3UTR TCA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCGCTCACCTCCAAAGATaGGTGATTCTGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSAHLQR*VILQRQ
Trigger: CTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGC...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTGACAAGGGGCCATGGTaGGGGGTTGGCGGGAGCAAT +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSDKGPW*GVGGSN
Trigger: ATTGCTCCCGCCAACCCCTCACCATGGCCCCTTGTC...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGAGTGGGCTAGGGGAGTaGGGGTTCCGAGAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMSGLGE*GFREGP
Trigger: TGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACT...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAACCAGGTCTGGAGCGGTaGCCGGCAAACCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREPGLER*PANLQQ
Trigger: CTGTTGAAGGTTTGCCGGGCACCGCTCCAGACCTGG...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCCCAGGTCTGGAGCGGTaGCCGGCAAACCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIPGLER*PANLQQ
Trigger: CTGTTGAAGGTTTGCCGGGCACCGCTCCAGACCTGG...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGTGCTCGATGCGGCTCTaGAGGCCCCGGAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWCSMRL*RPRNCF
Trigger: GAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCA...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGCTGGCGTCCACATTaGCATCCTGCATTTTACCAT +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNGWRPH*HPAFYH
Trigger: ATGGTAAAATGCAGGATGGCAATGTGGACGCCAGCC...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
CDS-3UTR GCA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTCCTGTTGTTTGGCTTTaGTCTGGCTGGCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSPVVWL*SGWRPH
Trigger: ATGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGG...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCCATCTCCATGGCGGCTaGCCCGTCCTGTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGHLHGG*PVLLFG
Trigger: GCCAAACAACAGGACGGGGCAGCCGCCATGGAGATG...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGCCCGCCTTCCCGATCTaGACAGCCAGCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMPAFPI*TASLVS
Trigger: GCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGG...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATCCCGCCTTCCCGATCTaGACAGCCAGCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYPAFPI*TASLVS
Trigger: GCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGG...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTGCACGTAGACGGGCGTaGACTCAGGCAGCCACGGCT +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVARRRA*TQAATA
Trigger: AGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGC...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGCCTCTGGCATCTGGCTaGGCACGGGCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWPLASG*ARARSP
Trigger: AGGACTACGAGCCCGTGCGCAGCCAGATGCCAGAGG...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCTCTGGCATCTGGCTaGGCACGGGCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSPLASG*ARARSP
Trigger: AGGACTACGAGCCCGTGCGCAGCCAGATGCCAGAGG...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTCCTCTGGCATCTGGCTaGGCACGGGCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFPLASG*ARARSP
Trigger: AGGACTACGAGCCCGTGCGCAGCCAGATGCCAGAGG...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAACCCCCTTGCTGTACATaGGGAAGCTCTCGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREPPCCT*GSSRRA
Trigger: TGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGG...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATAGTCCGGCTCCGGGCTaGTGGGGAAGTCGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNSPAPG*WGSRGR
Trigger: CCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACT...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCAGTCCGGCTCCGGGCTaGTGGGGAAGTCGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCSPAPG*WGSRGR
Trigger: CCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACT...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTAGTCCGGCTCCGGGCTaGTGGGGAAGTCGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLSPAPG*WGSRGR
Trigger: CCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACT...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGCGGACCGTGATGCCTaGCCGCTGGCACTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWADRDA*PLALAD
Trigger: ATCCGCAAGTGCCAGCGGGCAGGCATCACGGTCCGC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTGCGGACCGTGATGCCTaGCCGCTGGCACTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSADRDA*PLALAD
Trigger: ATCCGCAAGTGCCAGCGGGCAGGCATCACGGTCCGC...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGCGGACCGTGATGCCTaGCCGCTGGCACTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGADRDA*PLALAD
Trigger: ATCCGCAAGTGCCAGCGGGCAGGCATCACGGTCCGC...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCACCTTTAACCAGGGTATaGTTGTCCGTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ALQILASLGRMAVSVANPPLTRV*LSVGEE
Trigger: CTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGG...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGTCACGGCCACCACCTaGCGCTGCTCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: NIQDATQGKCLLGRAVFIVTATT*RCSVCV
Trigger: CACACACACTGAGCAGCGGCAGGTGGTGGCCGTGAC...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGTCGGCCTTCTTGAGTaGAGGCCCGTCGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAVGLLE*RPVVGP
Trigger: GGGACCAACGACGGGCCTGCACTCAAGAAGGCCGAC...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGGCCACGTCAGTGCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGGHVSA*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCC...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCACGGCTCAGTGGCCAGTaGCAGCGAGGCAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIARLSGQ*QRGKRV
Trigger: GACACGTTTGCCTCGCTGGCACTGGCCACTGAGCCG...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTTGGGGTTCCGGAAGATaGCGTCAAAGACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: DALLKVLLPGGFCQVGWAWGSGR*RQRHCA
Trigger: AGCGCAATGTCTTTGACGGCATCTTCCGGAACCCCA...AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGCTTCCCTCCAAACTaGACGATCACTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNGFPPN*TITIWM
Trigger: CATCCAGATAGTGATCGTGCAGTTTGGAGGGAAGCC...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAACCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGATTCAGTGGGGCCCATaGTGCTCCCTGGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWIQWGP*CSLELA
Trigger: TGCCAGTTCCAGGGAGCAGCATGGGCCCCACTGAAT...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCCTGCCGGGTGATGGCTaGTTGTGGCTGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSILPGDG*LWLSSA
Trigger: TGCTGAGGACAGCCACAAGCAGCCATCACCCGGCAG...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTTTGCTGCGGTCCTTaGTCGGGCTGGGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWVCCGP*SGWAQG
Trigger: CCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAAC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAGTCACCCATGTTTGCTaGGGTCCTTGCTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGVTHVC*GPCSGW
Trigger: CCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGAC...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTGGGTCTAACTCGTCCTaGATGAGCCTGGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSGSNSS*MSLARG
Trigger: GCCACGGGCCAGGCTCATGCAGGACGAGTTAGACCC...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467702.3
CDS-3UTR CCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGATCCTCTGCCCCACCCTaGGCCGTCGCACATCCTTCG +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGSSAPP*AVAHPS
Trigger: CGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGA...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGGGATCTGGACCACCTaGCCAGCCCGGACCACGGTA +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGGIWTT*PARTTV
Trigger: TACCGTGGTCCGGGCTGGCCAGGTGGTCCAGATCCC...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGATCAGCCACAGGGATCTaGACCACCTGGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGSATGI*TTWPAR
Trigger: CCGGGCTGGCCAGGTGGTCCAGATCCCTGTGGCTGA...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCTTCCTGACAGCAGCATaGGGTCCTTGTCCACGGACT +
Preference number: 4 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSFLTAA*GPCPRT
Trigger: AGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAA...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTGAGCCCTCCATCACGTaGGTTCCTGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMAEPSIT*VPDSSM
Trigger: CATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTC...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGAGCCCTCCATCACGTaGGTTCCTGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPEPSIT*VPDSSM
Trigger: CATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTC...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGCCCCGTCCTGTTGTTTaGCTTTGCTCTGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWPRPVV*LCSGWR
Trigger: ACGCCAGCCAGAGCAAAGCCAAACAACAGGACGGGG...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCACCTTCTTGTGCATGCTaGCCTTCTTCCTGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: ALQILASLGRMAVSVANPPSCAC*PSSCRQ
Trigger: CTGACGACAGGAAGAAGGCCAGCATGCACAAGAAGG...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCCCTTCTTGTGCATGCTaGCCTTCTTCCTGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: EKSSSSALQILASLGRMAPSCAC*PSSCRQ
Trigger: CTGACGACAGGAAGAAGGCCAGCATGCACAAGAAGG...GGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTTCTTGTCTGAGCAGATaGCTGTGGCATTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFSCLSR*LWHCPW
Trigger: CCATGGGCAATGCCACAGCCATCTGCTCAGACAAGA...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCGTACAACTTCTCCTCTaGCATCTGGCTGCGCACGGG +
Preference number: 4 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSVQLLL*HLAAHG
Trigger: CCCGTGCGCAGCCAGATGCCAGAGGAGAAGTTGTAC...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGGTGATGCCTGCCCGCTaGCACTTGCGGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWVMPAR*HLRMAS
Trigger: AGAAGCCATCCGCAAGTGCCAGCGGGCAGGCATCAC...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTCCCTGGACTTGAAGAGGTAGCTGATTTGCTTGTGTCGGTCGTCAGGTTGATCGGTATGCTTGTCCGTTaGGGAGGAGCGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LPGLEEVADLLVSVVRLIGMLVR*GGASQH
Trigger: GTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACC...GATCAACCTGACGACCGACACAAGCAAATCAGCTACCTCTTCAAGTCCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTCCGTGGGCGGCTCAGTaGCCAGTGCCAGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCPWAAQ*PVPARQ
Trigger: TTGCCTCGCTGGCACTGGCCACTGAGCCGCCCACGG...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGGCAGCAGGGTCTCCGTaGGCGGCTCAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLAAGSP*AAQWPV
Trigger: CACTGGCCACTGAGCCGCCCACGGAGACCCTGCTGC...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGCAGCAGGGTCTCCGTaGGCGGCTCAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLAAGSP*AAQWPV
Trigger: CACTGGCCACTGAGCCGCCCACGGAGACCCTGCTGC...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCATGGTGGCGATGACCTaGCCCCAAACGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAMVAMT*PQTSSP
Trigger: AGGAGAGCTCGTTTGGGGCCAGGTCATCGCCACCAT...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGATGGTGGCGATGACCTaGCCCCAAACGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWMVAMT*PQTSSP
Trigger: AGGAGAGCTCGTTTGGGGCCAGGTCATCGCCACCAT...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGCTACATCCTGGCTCTaGCTGGTGACCGAGGACTGT +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAATSWL*LVTEDC
Trigger: ACAGTCCTCGGTCACCAGCCAGAGCCAGGATGTAGC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGCTACATCCTGGCTCTaGCTGGTGACCGAGGACTGT +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWATSWL*LVTEDC
Trigger: ACAGTCCTCGGTCACCAGCCAGAGCCAGGATGTAGC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTACCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTAGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGATTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TCGATGGCGCTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGACTGAGAACCCCTCCTaGCTCCGAATGAACATGGAG +
Preference number: 4 (lower is better)
Translates to: SMALLFLLRDDGGLEFCLTENPS*LRMNME
Trigger: CTCCATGTTCATTCGGAGCCAGGAGGGGTTCTCAGT...CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTGAACTGGCATCTACATaGTCAGGGGTGGTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFELAST*SGVVAL
Trigger: AAGAGCCACCACCCCTGACCATGTAGATGCCAGTTC...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR CCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGGCTGCTCCCTGGAACTaGCATCTACATGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWAAPWN*HLHGQG
Trigger: CCCCTGACCATGTAGATGCCAGTTCCAGGGAGCAGC...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGCTGCTCCCTGGAACTaGCATCTACATGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAAAPWN*HLHGQG
Trigger: CCCCTGACCATGTAGATGCCAGTTCCAGGGAGCAGC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGGGAGTCTCCATTCAGTaGGGCCCATGCTGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVGVSIQ*GPCCSL
Trigger: CAGGGAGCAGCATGGGCCCCACTGAATGGAGACTCC...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCAGGTGTCCTCCGGTGTaGGACGAGGTCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLRCPPV*DEVQGP
Trigger: CGGCCCCTGGACCTCGTCCCACACCGGAGGACACCT...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTCTCCTCTTTCTCGTCTaGACCAGGGACAGATGGCGG +
Preference number: 4 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMALLFLV*TRDRWR
Trigger: CCGCCATCTGTCCCTGGTCCAGACGAGAAAGAGGAG...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp AAAGCTCCGCCTGAGTTGCAAGAAGGAAACTCCTCAGAGCTCTCTCTGCTCACCCAGGTAGCGCAAGAGTaGGCTAGGGGAGTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: KAPPELQEGNSSELSLLTQVAQE*ARGVRV
Trigger: AACCCTCACTCCCCTAGCCCACTCTTGCGCTACCTG...GGTGAGCAGAGAGAGCTCTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGCAGGTAGCGCAAGAGTaGGCTAGGGGAGTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWQVAQE*ARGVRV
Trigger: AACCCTCACTCCCCTAGCCCACTCTTGCGCTACCTG...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGCATGGTCAGGGGTGGTaGCTCCCCTCCACGTCTTCT +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMHGQGW*LPSTSS
Trigger: AGAAGACGTGGAGGGGAGCCACCACCCCTGACCATG...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS-3UTR CCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGCTGGCTCTAGGGACTaGGTGACGAAGTTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPAGSRD*VTKFSS
Trigger: CGAGCTGAACTTCGTCACCCAGTCCCTAGAGCCAGC...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646379.1
3UTR CAA 72 bp AAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTaGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGA +
Preference number: 4 (lower is better)
Translates to: KSSSSALQILAS*GRMAVSVANPG
Trigger: TCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCACAAACCTTCAACAGGTaGGGTTTTGAGGCGCCGGCA +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPQTFNR*GFEAPA
Trigger: TGCCGGCGCCTCAAAACCTCACCTGTTGAAGGTTTG...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAGACCACACAGATAACTaGGAGGAGAATGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGDHTDN*EENGGP
Trigger: GGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTC...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGGGAGGTCACCATATTTaGCCTGGGCTATGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWGGHHI*PGLCPQ
Trigger: TTGGGGACATAGCCCAGGTCAAATATGGTGACCTCC...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR TCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGGTCATTGCCCTGGATaGAGAGGCCGTCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGGHCPG*RGRRQG
Trigger: TCCCTGCCGACGGCCTCTTCATCCAGGGCAATGACC...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CTCCCTGGACTTGAAGAGGTAGCTGATTTGCTTGTGTCGGTCGTCAGGTTGATCCATCACGTGGGTTCCTaGCAGCAGCATGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LPGLEEVADLLVSVVRLIHHVGS*QQHGVL
Trigger: AAGGACCCCATGCTGCTGTCAGGAACCCACGTGATG...GATCAACCTGACGACCGACACAAGCAAATCAGCTACCTCTTCAAGTCCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCACACCAACATCCGTCCTaGGCCCTCCATCACGTGGGT +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAHQHPS*ALHHVG
Trigger: ACCCACGTGATGGAGGGCTCAGGACGGATGTTGGTG...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCCCTGCATTTTACCATTaGCTAGGCTGGCATTCGCAC +
Preference number: 4 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGPAFYH*LGWHSH
Trigger: GTGCGAATGCCAGCCTAGTCAATGGTAAAATGCAGG...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR TCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCACAGCCAGCTTGGTaGGCTTGCCCTGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGAQPAW*ACPAAR
Trigger: CCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGC...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGGCACAGCCAGCTTGGTaGGCTTGCCCTGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSAQPAW*ACPAAR
Trigger: CCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGC...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAGATCACCGTGATGGCTaGCATCACCAAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREDHRDG*HHQARL
Trigger: AAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATC...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAGCCACGGCTTCTTGTTaGCCACGAAGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREATASC*PRRCPQ
Trigger: CTGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGC...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCGCCACGGCTTCTTGTTaGCCACGAAGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLATASC*PRRCPQ
Trigger: CTGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGC...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTAGGCCAACGAGATGGTaGCGGCCAGAGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVRPTRW*RPEGAP
Trigger: AGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCT...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGCTCTCCCGCCCCATTaGGGATTTTGCAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPALPPH*GFCSTS
Trigger: AGAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGC...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGCTCTCCCGCCCCATTaGGGATTTTGCAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWALPPH*GFCSTS
Trigger: AGAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCATCATGGTCCTGGAGATaGGCGGCTTGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIASWSWR*AACCGR
Trigger: ACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGA...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTCCTCCACGTCCTCGTTaGGCTCCTCCTCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLPPRPR*APPPGS
Trigger: AGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGG...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTCGCTGTTGTTCTTGTTaGGGGATGACGGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFRCCSC*GMTAGS
Trigger: CGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCG...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWCRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGSLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLSLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGTCAAGCGAGTTTCATTaGGAGAAAAGTCTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLSSEFH*EKSLRA
Trigger: TGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGA...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR TCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGACCTTTTCTCACCTGTaGTACTGTAGGGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLTFSHL*YCRVSE
Trigger: TTCTGAAACCCTACAGTATCACAGGTGAGAAAAGGT...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGTAGGCCCTCCCAGTTaGCTATGGCTCTTTTCCCGA +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWVGPPS*LWLFSR
Trigger: TCGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTAC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TCGATGGCGCTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGTTCACGACATTCAGGTaGTGCGCTCTTGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SMALLFLLRDDGGLEFCLFTTFR*CALEGP
Trigger: AGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAA...CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR TCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATTCACGGACACATGACTaGTCAAAGAAGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNSRTHD*SKKWGD
Trigger: ATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGA...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGATACCCCCTAATGGAGTaGACTGCCAAACGTACCCCA +
Preference number: 4 (lower is better)
Translates to: VGRQVDPTVDGAVVLVEGYPLME*TAKRTP
Trigger: TGGGGTACGTTTGGCAGTTCACTCCATTAGGGGGTA...TCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000352432.9
ENST00000460129.5
CDS-3UTR GCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGGGAGCTCCTCCATTGTaGACCCGAACTCGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMGAPPL*TRTRPH
Trigger: ATGGGGGCGAGTTCGGGTGCACAATGGAGGAGCTCC...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAAGGAGCTCCTCCATTGTaGACCCGAACTCGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: VMERGHGHMTDQRSGEMEGAPPL*TRTRPH
Trigger: ATGGGGGCGAGTTCGGGTGCACAATGGAGGAGCTCC...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGAGCTCCTCCATTGTaGACCCGAACTCGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHGAPPL*TRTRPH
Trigger: ATGGGGGCGAGTTCGGGTGCACAATGGAGGAGCTCC...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCCAGGTCTGGAGCGGTaGCCGGCAAACCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFPGLER*PANLQQ
Trigger: CTGTTGAAGGTTTGCCGGGCACCGCTCCAGACCTGG...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTCGCACATCCTTCGTTaGCCTCGCCGGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARSHILR*PRRAGG
Trigger: ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGA...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTTCGCACATCCTTCGTTaGCCTCGCCGGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGSHILR*PRRAGG
Trigger: ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGA...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCCCCTCGATCCAACCTaGCTCTGCCTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLPLDPT*LCLSFI
Trigger: GATGAAGGAGAGGCAGAGGCAGGTTGGATCGAGGGG...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTAAATTTCTGTTCCTaGTCGATGCGGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EKSSSSALQILASLGRMAVNFCS*SMRLCR
Trigger: CCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTAC...GGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp TCGATGGCGCTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGGTAAATTTCTGTTCCTaGTCGATGCGGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SMALLFLLRDDGGLEFCLVNFCS*SMRLCR
Trigger: CCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTAC...CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACCCTTGTCCACGGACTTaGGCACCTGGTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYPCPRT*APGQTL
Trigger: GAGAGTCTGACCAGGTGCGCAAGTCCGTGGACAAGG...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCCTTGTCCACGGACTTaGGCACCTGGTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWPCPRT*APGQTL
Trigger: GAGAGTCTGACCAGGTGCGCAAGTCCGTGGACAAGG...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCATCTCCATGGCGGCTaGCCCGTCCTGTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFHLHGG*PVLLFG
Trigger: GCCAAACAACAGGACGGGGCAGCCGCCATGGAGATG...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATACATCTCCATGGCGGCTaGCCCGTCCTGTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: NIQDATQGKCLLGRAVFIHLHGG*PVLLFG
Trigger: GCCAAACAACAGGACGGGGCAGCCGCCATGGAGATG...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTCCCGCCTTCCCGATCTaGACAGCCAGCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: EVSVGPSCFYSISATSVLPAFPI*TASLVS
Trigger: GCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGG...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCGCACGTAGACGGGCGTaGACTCAGGCAGCCACGGCT +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCARRRA*TQAATA
Trigger: AGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGC...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGGCACGTAGACGGGCGTaGACTCAGGCAGCCACGGCT +
Preference number: 4 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLARRRA*TQAATA
Trigger: AGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGC...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCCCCTTGCTGTACATaGGGAAGCTCTCGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSPPCCT*GSSRRA
Trigger: TGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGG...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGCCCCCTTGCTGTACATaGGGAAGCTCTCGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWPPCCT*GSSRRA
Trigger: TGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGG...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTAGTCCGGCTCCGGGCTaGTGGGGAAGTCGCGGTAGG +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVASPAPG*WGSRGR
Trigger: CCTACCGCGACTTCCCCAGCAGCCCGGAGCCGGACT...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGAACCAAATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCACCGGGTCCTCGATaGCCACCACGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: RTKSATYSWSPCLEDRKEAPGPR*PPRRCR
Trigger: CCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGC...TTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GGAGGCGGCACCATTCCCTCGCTACTCTATTATAAAATATGTGCACACAAGAGTGCGGACCGTGATGCCTaGCCGCTGGCACTTGCGGAT +
Preference number: 4 (lower is better)
Translates to: GGGTIPSLLYYKICAHKSADRDA*PLALAD
Trigger: ATCCGCAAGTGCCAGCGGGCAGGCATCACGGTCCGC...ACTCTTGTGTGCACATATTTTATAATAGAGTAGCGAGGGAATGGTGCCGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGACCTTTAACCAGGGTATaGTTGTCCGTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VGRQVDPTVDGAVVLVEGPLTRV*LSVGEE
Trigger: CTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGG...TCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCTTCACCCAGAGCATCTaGACGGCCTTCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLFTQSI*TAFRGE
Trigger: CTCCCCTCTGAAGGCCGTGCAGATGCTCTGGGTGAA...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGTTCACCCAGAGCATCTaGACGGCCTTCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWFTQSI*TAFRGE
Trigger: CTCCCCTCTGAAGGCCGTGCAGATGCTCTGGGTGAA...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCTTCACCCAGAGCATCTaGACGGCCTTCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIFTQSI*TAFRGE
Trigger: CTCCCCTCTGAAGGCCGTGCAGATGCTCTGGGTGAA...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGCGGCTCAGTGGCCAGTaGCAGCGAGGCAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWRLSGQ*QRGKRV
Trigger: GACACGTTTGCCTCGCTGGCACTGGCCACTGAGCCG...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGCTGTGTGAGCCTGCCTaGCTCCTTGAGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWLCEPA*LLEELE
Trigger: CTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAG...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAAGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: VMERGHGHMTDQRSGEMEGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AGAACCAAATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RTKSATYSWSPCLEDRKEAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...TTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGACCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: VGRQVDPTVDGAVVLVEGPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...TCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCCTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTACCATGTTCCAAGGCTaGCCCATGTTTTACACGTGC +
Preference number: 4 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSTMFQG*PMFYTC
Trigger: GCACGTGTAAAACATGGGGCAGCCTTGGAACATGGT...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTAATCACCACCAATCCTaGACGGTTTCCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFNHHQS*TVSRRA
Trigger: TGCCCGCCGGGAAACCGTGCAGGATTGGTGGTGATT...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR GCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACCTGCCGGGTGATGGCTaGTTGTGGCTGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHLPGDG*LWLSSA
Trigger: TGCTGAGGACAGCCACAAGCAGCCATCACCCGGCAG...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCGCTGGACAAGAGGCTaGCGGGTGATGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSRWTRG*RVMAAC
Trigger: ACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCG...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAACGCTGGACAAGAGGCTaGCGGGTGATGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: VMERGHGHMTDQRSGEMERWTRG*RVMAAC
Trigger: ACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCG...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCGTTTGCTGCGGTCCTTaGTCGGGCTGGGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCVCCGP*SGWAQG
Trigger: CCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAAC...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGTCACCCATGTTTGCTaGGGTCCTTGCTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFVTHVC*GPCSGW
Trigger: CCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGAC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCCATGTCACCCATGTTTaGTGCGGTCCTTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGHVTHV*CGPCSG
Trigger: GCCCGAGCAAGGACCGCAGCAAACATGGGTGACATG...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTTCCTCTGCCCCACCCTaGGCCGTCGCACATCCTTCG +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVSSAPP*AVAHPS
Trigger: CGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGA...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCCTCTGCCCCACCCTaGGCCGTCGCACATCCTTCG +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCSSAPP*AVAHPS
Trigger: CGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGA...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCGGGATCTGGACCACCTaGCCAGCCCGGACCACGGTA +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCGIWTT*PARTTV
Trigger: TACCGTGGTCCGGGCTGGCCAGGTGGTCCAGATCCC...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTCAGCCACAGGGATCTaGACCACCTGGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARSATGI*TTWPAR
Trigger: CCGGGCTGGCCAGGTGGTCCAGATCCCTGTGGCTGA...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCTCACCATATTTGACCTaGGCTATGTCCCCAACCACG +
Preference number: 4 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGSPYLT*AMSPTT
Trigger: CGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGA...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACGAGCCCTCCATCACGTaGGTTCCTGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYEPSIT*VPDSSM
Trigger: CATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTC...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAGAGCCCTCCATCACGTaGGTTCCTGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGEPSIT*VPDSSM
Trigger: CATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTC...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCCCCCGTCCTGTTGTTTaGCTTTGCTCTGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIPRPVV*LCSGWR
Trigger: ACGCCAGCCAGAGCAAAGCCAAACAACAGGACGGGG...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATGGCGCCCTCCTTCTCTaGGGGCAGAATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYGALLL*GQNLGG
Trigger: ACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCC...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGGCGCCCTCCTTCTCTaGGGGCAGAATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMGALLL*GQNLGG
Trigger: ACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCC...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGGCGCCCTCCTTCTCTaGGGGCAGAATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFGALLL*GQNLGG
Trigger: ACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTGGCTTCTGGGACCTCTaGCCGCACCGGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLGFWDL*PHRVLD
Trigger: ATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAGCC...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGGGCTTCTGGGACCTCTaGCCGCACCGGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSGFWDL*PHRVLD
Trigger: ATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAGCC...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCGGCTTCTGGGACCTCTaGCCGCACCGGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCGFWDL*PHRVLD
Trigger: ATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAGCC...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTCTTGCGGATGGCTTCTaGGACCTCTGGCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLLADGF*DLWPHR
Trigger: CCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAG...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTCTTGCGGATGGCTTCTaGGACCTCTGGCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCLADGF*DLWPHR
Trigger: CCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAG...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGCTTGCGGATGGCTTCTaGGACCTCTGGCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLLADGF*DLWPHR
Trigger: CCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAG...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCCTTGCGGATGGCTTCTaGGACCTCTGGCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCLADGF*DLWPHR
Trigger: CCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAG...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTGTGATGCCTGCCCGCTaGCACTTGCGGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSVMPAR*HLRMAS
Trigger: AGAAGCCATCCGCAAGTGCCAGCGGGCAGGCATCAC...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTGTGATGCCTGCCCGCTaGCACTTGCGGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSVMPAR*HLRMAS
Trigger: AGAAGCCATCCGCAAGTGCCAGCGGGCAGGCATCAC...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGTGATGCCTGCCCGCTaGCACTTGCGGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFVMPAR*HLRMAS
Trigger: AGAAGCCATCCGCAAGTGCCAGCGGGCAGGCATCAC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGTGATGCCTGCCCGCTaGCACTTGCGGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAVMPAR*HLRMAS
Trigger: AGAAGCCATCCGCAAGTGCCAGCGGGCAGGCATCAC...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGAGTGCAGGCCCGTCGTTaGTCCCGTCCCCCGTCACGG +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGVQARR*SRPPSR
Trigger: CCGTGACGGGGGACGGGACCAACGACGGGCCTGCAC...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGTGCAGGCCCGTCGTTaGTCCCGTCCCCCGTCACGG +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVVQARR*SRPPSR
Trigger: CCGTGACGGGGGACGGGACCAACGACGGGCCTGCAC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCCTGCGATGCCCATaGCGAAGCCCACGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCCLRCP*RSPRRP
Trigger: AGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCA...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTGCCTGCGATGCCCATaGCGAAGCCCACGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCCLRCP*RSPRRP
Trigger: AGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCA...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGATGGTGGCGATGACCTaGCCCCAAACGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMMVAMT*PQTSSP
Trigger: AGGAGAGCTCGTTTGGGGCCAGGTCATCGCCACCAT...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACATGGTGGCGATGACCTaGCCCCAAACGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYMVAMT*PQTSSP
Trigger: AGGAGAGCTCGTTTGGGGCCAGGTCATCGCCACCAT...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCGCTACATCCTGGCTCTaGCTGGTGACCGAGGACTGT +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGATSWL*LVTEDC
Trigger: ACAGTCCTCGGTCACCAGCCAGAGCCAGGATGTAGC...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGTCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPSPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ATTCTGCAGCGCCAGGAGTCACTGAACGGGCTCCCTGCCCTTCCCTCATCTGTTCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: ILQRQESLNGLPALPSSVQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...AACAGATGAGGGAAGGGCAGGGAGCCCGTTCAGTGACTCCTGGCGCTGCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGCCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGGGCGGGTGCATGGCTaGTCCATGTCTGGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLGRVHG*SMSGWE
Trigger: CTCCCACCCAGACATGGACCAGCCATGCACCCGCCC...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: QASFIPDKRRPTLMLAFFMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...GAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATTTAAACCCCTCAGGATaGCAACTCGGTAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNLNPSG*QLGSIW
Trigger: CCAAATGCTACCGAGTTGCCATCCTGAGGGGTTTAA...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTGAGGATTTTGCCAGGTaGGATGGGCTGACTTTGAAC +
Preference number: 4 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFEDFAR*DGLTLN
Trigger: GTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTC...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGAGCACATCTGAGGGCTaGTCACCCCTTTGGTTATGC +
Preference number: 4 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWSTSEG*SPLWLC
Trigger: GCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCT...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAGCTGCTCCCTGGAACTaGCATCTACATGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGAAPWN*HLHGQG
Trigger: CCCCTGACCATGTAGATGCCAGTTCCAGGGAGCAGC...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAAGCTCCGCCTGAGTTGCAAGAAGGAAACTCCTCAGAGCTCTCTCTGCTCACCGCCCATGCTGCTCCCTaGAACTGGCATCTACATGGT +
Preference number: 4 (lower is better)
Translates to: KAPPELQEGNSSELSLLTAHAAP*NWHLHG
Trigger: ACCATGTAGATGCCAGTTCCAGGGAGCAGCATGGGC...GGTGAGCAGAGAGAGCTCTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTAGGTGTCCTCCGGTGTaGGACGAGGTCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVARCPPV*DEVQGP
Trigger: CGGCCCCTGGACCTCGTCCCACACCGGAGGACACCT...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAATCAGCACACCCTCACTaGTCAGCTGTGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: VMERGHGHMTDQRSGEMESAHPH*SAVAPG
Trigger: GCCTGGTGCCACAGCTGACCAGTGAGGGTGTGCTGA...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCCCCAAGGGTCAGCGCTaGACAAGAGGCTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCPKGQR*TRGCRV
Trigger: CACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGG...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGAGTAAAAGTCGCTGTTaGTCATGTCACCCATGTTTG +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLSKSRC*SCHPCL
Trigger: CAAACATGGGTGACATGACCAACAGCGACTTTTACT...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCACGCGGATCTGTGTCTaGATCCGATTCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLTRICV*IRFRPR
Trigger: CCGAGGCCTGAATCGGATCCAGACACAGATCCGCGT...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000467702.3
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGTTGGGGAAAAGAGTaGCTTCCAACAACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: ALQILASLGRMAVSVANPGWGKE*LPTTGG
Trigger: TCCTCCAGTTGTTGGAAGCCACTCTTTTCCCCAACC...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGTTAAAATTGTATGGCTaGTGCCAGATGAGACACCCA +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLLKLYG*CQMRHP
Trigger: TGGGTGTCTCATCTGGCACCAGCCATACAATTTTAA...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAAGAGGTGTCAGGGTCTaGAAACTGGGGCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPRGVRV*KLGPMS
Trigger: AGACATGGGCCCCAGTTTCCAGACCCTGACACCTCT...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460129.5
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTACATGGTCAGGGGTaGTGGCTCCCCTCCACGTCT +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFLHGQG*WLPSTS
Trigger: AGACGTGGAGGGGAGCCACCACCCCTGACCATGTAG...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000460129.5
ENST00000646379.1
3UTR CAA 72 bp CCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTaGTACTGGAATCCAATAAGCACATCTGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PCRRAVGWLWWR*YWNPISTSEGW
Trigger: CCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATGGTCATTGCCCTGGATaGAGAGGCCGTCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHGHCPG*RGRRQG
Trigger: TCCCTGCCGACGGCCTCTTCATCCAGGGCAATGACC...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR TCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTGGTCATTGCCCTGGATaGAGAGGCCGTCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARGHCPG*RGRRQG
Trigger: TCCCTGCCGACGGCCTCTTCATCCAGGGCAATGACC...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATCATCACGTGGGTTCCTaGCAGCAGCATGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYHHVGS*QQHGVL
Trigger: AAGGACCCCATGCTGCTGTCAGGAACCCACGTGATG...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CTCCCTGGACTTGAAGAGGTAGCTGATTTGCTTGTGTCGGTCGTCAGGTTGATCACTATCTGCAGCATTTaGAGCTGCCGCACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: LPGLEEVADLLVSVVRLITICSI*SCRTVC
Trigger: GCAGACGGTGCGGCAGCTTCAAATGCTGCAGATAGT...GATCAACCTGACGACCGACACAAGCAAATCAGCTACCTCTTCAAGTCCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352432.9
CDS-3UTR TCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCAGCCACGGCTTCTTGTTaGCCACGAAGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSATASC*PRRCPQ
Trigger: CTGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGC...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTGCCACGGCTTCTTGTTaGCCACGAAGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSATASC*PRRCPQ
Trigger: CTGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGC...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTAGGCCAACGAGATGGTaGCGGCCAGAGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVARPTRW*RPEGAP
Trigger: AGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCT...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAGCTCTCCCGCCCCATTaGGGATTTTGCAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGALPPH*GFCSTS
Trigger: AGAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGC...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCCACGTCGGCCTTCTTaGGTGCAGGCCCGTCGTTGG +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAPRRPS*VQARRW
Trigger: CCAACGACGGGCCTGCACTCAAGAAGGCCGACGTGG...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCATGGTCCTGGAGATaGGCGGCTTGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVSWSWR*AACCGR
Trigger: ACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGA...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGATGGTGTAATGTTCTaGGGGTGGCGAATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIDGVMF*GWRMQG
Trigger: CCCCTGCATTCGCCACCCTCAGAACATTACACCATC...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTGATGGTGTAATGTTCTaGGGGTGGCGAATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QDATQGKCLLGRAVFIASDGVMF*GWRMQG
Trigger: CCCCTGCATTCGCCACCCTCAGAACATTACACCATC...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGGCAGTGGAGAGCAGCTaGATGGCTTCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPAVESS*MASLQT
Trigger: AGTTTGGAGGGAAGCCATTCAGCTGCTCTCCACTGC...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCGCAGTGGAGAGCAGCTaGATGGCTTCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLAVESS*MASLQT
Trigger: AGTTTGGAGGGAAGCCATTCAGCTGCTCTCCACTGC...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCCCTCCACGTCCTCGTTaGGCTCCTCCTCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCPPRPR*APPPGS
Trigger: AGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGG...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCAATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAAIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCAATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 4 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAAIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SLREKSSSSALQILASLGVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTCGCTGTTGTTCTTGTTaGGGGATGACGGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVRCCSC*GMTAGS
Trigger: CGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCG...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCCATTTGGCTTCTGCCTaGGCCTCTCACGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIHLASA*ASHGSD
Trigger: GTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATG...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTCATTTGGCTTCTGCCTaGGCCTCTCACGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTHLASA*ASHGSD
Trigger: GTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATG...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGAGGTCACGGACACATaGCTGATCAAAGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPEVTDT*LIKEVG
Trigger: CCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTC...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTGAGGTCACGGACACATaGCTGATCAAAGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMAEVTDT*LIKEVG
Trigger: CCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTC...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TCGATGGCGCTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCATCCTTCATTCCTaGCAAGAGAAGACCAACGCT +
Preference number: 4 (lower is better)
Translates to: SMALLFLLRDDGGLEFCLSILHS*QEKTNA
Trigger: AGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCT...CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR TCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCCAAGAGGCTGCCGGGTaGTGGCTGCTTGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCQEAAG*WLLVAV
Trigger: GACAGCCACAAGCAGCCATCACCCGGCAGCCTCTTG...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTACCTCCAAAGATGAGTaGTTCTGCAGCGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMATSKDE*FCSARS
Trigger: ACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGT...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAAAAGAAAGCTCCGCCTaGGTTGCAAGAAGGAAACTC +
Preference number: 4 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQKESSA*VARRKL
Trigger: GAGTTTCCTTCTTGCAACTCAGGCGGAGCTTTCTTT...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGCTTCCTGCTATTGTCTaGCTTCCCTCCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVLPAIV*LPSWLW
Trigger: CCAGAGCCAGGAGGGAAGTCAGACAATAGCAGGAAG...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGCTCTAGGGACTGGGTaGCGAAGTTCAGCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFALGTG*RSSARL
Trigger: CAGACGAGCTGAACTTCGTCACCCAGTCCCTAGAGC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646379.1
CDS-3UTR GCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTCCAGGTCTGGAGCGGTaGCCGGCAAACCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGPGLER*PANLQQ
Trigger: CTGTTGAAGGTTTGCCGGGCACCGCTCCAGACCTGG...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCCCCTCGATCCAACCTaGCTCTGCCTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSPLDPT*LCLSFI
Trigger: GATGAAGGAGAGGCAGAGGCAGGTTGGATCGAGGGG...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATCCCCTCGATCCAACCTaGCTCTGCCTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYPLDPT*LCLSFI
Trigger: GATGAAGGAGAGGCAGAGGCAGGTTGGATCGAGGGG...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGCTCGATGCGGCTCTaGAGGCCCCGGAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLCSMRL*RPRNCF
Trigger: GAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCA...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTGCTCGATGCGGCTCTaGAGGCCCCGGAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGCSMRL*RPRNCF
Trigger: GAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCA...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATACCTTGTCCACGGACTTaGGCACCTGGTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: NIQDATQGKCLLGRAVFIPCPRT*APGQTL
Trigger: GAGAGTCTGACCAGGTGCGCAAGTCCGTGGACAAGG...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACCCTTGTCCACGGACTTaGGCACCTGGTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHPCPRT*APGQTL
Trigger: GAGAGTCTGACCAGGTGCGCAAGTCCGTGGACAAGG...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCCTTGTCCACGGACTTaGGCACCTGGTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFPCPRT*APGQTL
Trigger: GAGAGTCTGACCAGGTGCGCAAGTCCGTGGACAAGG...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTCATCTCCATGGCGGCTaGCCCGTCCTGTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: EVSVGPSCFYSISATSVLHLHGG*PVLLFG
Trigger: GCCAAACAACAGGACGGGGCAGCCGCCATGGAGATG...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCCCGCCTTCCCGATCTaGACAGCCAGCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVPAFPI*TASLVS
Trigger: GCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGG...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCCCTGTACCACTGTCATaGGATTGGTGGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIPVPLS*DWWSAC
Trigger: GCACGCTGACCACCAATCGCATGACAGTGGTACAGG...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTCCTCTGGCATCTGGCTaGGCACGGGCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARPLASG*ARARSP
Trigger: AGGACTACGAGCCCGTGCGCAGCCAGATGCCAGAGG...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGCCCCCTTGCTGTACATaGGGAAGCTCTCGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWPPCCT*GSSRRA
Trigger: TGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGG...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTCCCCCTTGCTGTACATaGGGAAGCTCTCGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVPPCCT*GSSRRA
Trigger: TGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGG...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGCCTTTAACCAGGGTATaGTTGTCCGTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWPLTRV*LSVGEE
Trigger: CTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGG...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCGTCACGGCCACCACCTaGCGCTGCTCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCVTATT*RCSVCV
Trigger: CACACACACTGAGCAGCGGCAGGTGGTGGCCGTGAC...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGGTCACGGCCACCACCTaGCGCTGCTCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVVTATT*RCSVCV
Trigger: CACACACACTGAGCAGCGGCAGGTGGTGGCCGTGAC...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCGTCGGCCTTCTTGAGTaGAGGCCCGTCGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCVGLLE*RPVVGP
Trigger: GGGACCAACGACGGGCCTGCACTCAAGAAGGCCGAC...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTTTCACCCAGAGCATCTaGACGGCCTTCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSFTQSI*TAFRGE
Trigger: CTCCCCTCTGAAGGCCGTGCAGATGCTCTGGGTGAA...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCGGCTCAGTGGCCAGTaGCAGCGAGGCAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVRLSGQ*QRGKRV
Trigger: GACACGTTTGCCTCGCTGGCACTGGCCACTGAGCCG...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCCGGCTCAGTGGCCAGTaGCAGCGAGGCAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCRLSGQ*QRGKRV
Trigger: GACACGTTTGCCTCGCTGGCACTGGCCACTGAGCCG...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTCGGCTCAGTGGCCAGTaGCAGCGAGGCAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARRLSGQ*QRGKRV
Trigger: GACACGTTTGCCTCGCTGGCACTGGCCACTGAGCCG...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCATGGGGTTCCGGAAGATaGCGTCAAAGACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPWGSGR*RQRHCA
Trigger: AGCGCAATGTCTTTGACGGCATCTTCCGGAACCCCA...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGATCCACTGGTCCAGCTaGAGTGGAGAGCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWIHWSS*SGEQLN
Trigger: ATTCAGCTGCTCTCCACTGCAGCTGGACCAGTGGAT...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGTGTGAGCCTGCCTaGCTCCTTGAGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWLCEPA*LLEELE
Trigger: CTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAG...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGAACCAAATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAATGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: RTKSATYSWSPCLEDRKEWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...TTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTAAAGTCTTCGAGCAGTaGTTTGCAGATCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSKVFEQ*FADPGI
Trigger: GATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTT...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGATCCTCATCCAATATaGCAACAGCTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: EKSSSSALQILASLGRMADPHPI*QQLRCC
Trigger: GCAGCATCTGAGCTGTTGGCATATTGGATGAGGATC...GGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCACTGAGACCCACAAAGTaGTTAGCAGTTAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALQILASLGRMAVSVANPLRPTK*LAVKRL
Trigger: CAGCCTCTTAACTGCTAAGCACTTTGTGGGTCTCAG...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTGTGAGAGTGAGGGGGTaGATGTGTGCAAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMAVRVRG*MCASIL
Trigger: AAGGATGCTTGCACACATGCACCCCCTCACTCTCAC...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TTTTGGACACAATGGCAGGAGAGAGATTTGGGTGGGAGGCTTGTCAGAATGCACATTCAGTGGGGCCCATaGTGCTCCCTGGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: FWTQWQERDLGGRLVRMHIQWGP*CSLELA
Trigger: TGCCAGTTCCAGGGAGCAGCATGGGCCCCACTGAAT...GTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGACGCTGGACAAGAGGCTaGCGGGTGATGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGRWTRG*RVMAAC
Trigger: ACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCG...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTCATGTCACCCATGTTTaGTGCGGTCCTTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFHVTHV*CGPCSG
Trigger: GCCCGAGCAAGGACCGCAGCAAACATGGGTGACATG...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCCGAGAGGAAAGGTCCAGGAGGGAGAGCACCACAGGCATTACAAAACAGACTTCTCAGAACCAAATCTaGCACTTACTCCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PREERSRRESTTGITKQTSQNQI*HLLLEP
Trigger: GGGCTCCAGGAGTAAGTGGCAGATTTGGTTCTGAGA...AGTCTGTTTTGTAATGCCTGTGGTGCTCTCCCTCCTGGACCTTTCCTCTCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGACCGAACTCGCCCCCATaGCTCGACTCATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGPNSPP*LDSFLW
Trigger: CCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTTCCTCTGCCCCACCCTaGGCCGTCGCACATCCTTCG +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVASSAPP*AVAHPS
Trigger: CGAAGGATGTGCGACGGCCCAGGGTGGGGCAGAGGA...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGAGCCCTCCATCACGTaGGTTCCTGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWEPSIT*VPDSSM
Trigger: CATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTGAGCCCTCCATCACGTaGGTTCCTGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFEPSIT*VPDSSM
Trigger: CATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTC...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTTGTTTGGCTTTGCTCTaGCTGGCGTCCACATTGCCA +
Preference number: 4 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMACLALL*LASTLP
Trigger: TGGCAATGTGGACGCCAGCCAGAGCAAAGCCAAACA...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTCCCCGTCCTGTTGTTTaGCTTTGCTCTGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFPRPVV*LCSGWR
Trigger: ACGCCAGCCAGAGCAAAGCCAAACAACAGGACGGGG...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGGCGCCCTCCTTCTCTaGGGGCAGAATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGGALLL*GQNLGG
Trigger: ACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCC...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGTACAACTTCTCCTCTaGCATCTGGCTGCGCACGGG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFVQLLL*HLAAHG
Trigger: CCCGTGCGCAGCCAGATGCCAGAGGAGAAGTTGTAC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTCCGGCTCCGGGCTGCTaGGGAAGTCGCGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSPAPGC*GSRGRP
Trigger: TGGCCTACCGCGACTTCCCCAGCAGCCCGGAGCCGG...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGTGATGCCTGCCCGCTaGCACTTGCGGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGVMPAR*HLRMAS
Trigger: AGAAGCCATCCGCAAGTGCCAGCGGGCAGGCATCAC...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGCGATCACTATCTGGATaGCAAAGGTGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWRSLSG*QRCPAR
Trigger: TCGTGCTGGGCACCTTTGCCATCCAGATAGTGATCG...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCATGCACGATCACTATCTaGATGGCAAAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPCTITI*MAKVPS
Trigger: GCTGGGCACCTTTGCCATCCAGATAGTGATCGTGCA...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAATGGTGGCGATGACCTaGCCCCAAACGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: NIQDATQGKCLLGRAVFIMVAMT*PQTSSP
Trigger: AGGAGAGCTCGTTTGGGGCCAGGTCATCGCCACCAT...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCCGGAACCACAGGATCTaGCCCCGCCGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVRNHRI*PRRSSR
Trigger: GCGGGAGCTGCGGCGGGGCCAGATCCTGTGGTTCCG...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTCGGAACCACAGGATCTaGCCCCGCCGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSRNHRI*PRRSSR
Trigger: GCGGGAGCTGCGGCGGGGCCAGATCCTGTGGTTCCG...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCTCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAASMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAATCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: FSRVALILFVEEFSGPGESPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCATCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIASPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFSPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAGGGTGCCTGGATGGATaGGTGCCCGGAAAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWIGCLDG*VPGKRV
Trigger: CACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSILLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCTGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAATGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: FSRVALILFVEEFSGPGEWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTTTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCACAACTCGGTAGCATTTaGCTTCTGCCTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPQLGSI*LLPEPL
Trigger: GAGAGGCTCAGGCAGAAGCCAAATGCTACCGAGTTG...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTTTAAACCCCTCAGGATaGCAACTCGGTAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFLNPSG*QLGSIW
Trigger: CCAAATGCTACCGAGTTGCCATCCTGAGGGGTTTAA...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGCATCCTTGGGCCGGATaGCCGTTAGTGTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMHPWAG*PLVLQT
Trigger: GGTTTGCAACACTAACGGCCATCCGGCCCAAGGATG...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAAGTGCTTTGCAGATCCTaGCATCCTTGGGCCGGATGG +
Preference number: 4 (lower is better)
Translates to: FSRVALILFVEEFSGPGEVLCRS*HPWAGW
Trigger: CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCAC...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGTGCTTTGCAGATCCTaGCATCCTTGGGCCGGATGG +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAVLCRS*HPWAGW
Trigger: CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCAC...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCAGTGCTTTGCAGATCCTaGCATCCTTGGGCCGGATGG +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSVLCRS*HPWAGW
Trigger: CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCAC...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTTGTGGAAGAGTTCTCTaGGCCTGGAGAAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QDATQGKCLLGRAVFIASCGRVL*AWRREG
Trigger: CCCTTCCCTTCTCCAGGCCCAGAGAACTCTTCCACA...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAAGCACATCTGAGGGCTaGTCACCCCTTTGGTTATGC +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPSTSEG*SPLWLC
Trigger: GCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCT...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCTTGTAGGAGAGCAGTaGGCTGGCTTTGGTGGCGTT +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLLVGEQ*AGFGGV
Trigger: AACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAG...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGACTGAGAACCCCTCCTaGCTCCGAATGAACATGGAG +
Preference number: 4 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWTENPS*LRMNME
Trigger: CTCCATGTTCATTCGGAGCCAGGAGGGGTTCTCAGT...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCCTACATGGTCAGGGGTaGTGGCTCTTGGCTATGAAA +
Preference number: 4 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSLHGQG*WLLAMK
Trigger: TTTCATAGCCAAGAGCCACCACCCCTGACCATGTAG...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR CCA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTGCCCATGCTGCTCCCTaGAACTGGCATCTACATGGT +
Preference number: 4 (lower is better)
Translates to: QDATQGKCLLGRAVFIASAHAAP*NWHLHG
Trigger: ACCATGTAGATGCCAGTTCCAGGGAGCAGCATGGGC...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGAGGTGTCCTCCGGTGTaGGACGAGGTCCAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVRCPPV*DEVQGP
Trigger: CGGCCCCTGGACCTCGTCCCACACCGGAGGACACCT...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTACGCGGATCTGTGTCTaGATCCGATTCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFTRICV*IRFRPR
Trigger: CCGAGGCCTGAATCGGATCCAGACACAGATCCGCGT...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000467702.3
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTACGCGGATCTGTGTCTaGATCCGATTCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSTRICV*IRFRPR
Trigger: CCGAGGCCTGAATCGGATCCAGACACAGATCCGCGT...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000467702.3
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGCATTTCAGCATGGTTaGGGAAAAGAGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ALQILASLGRMAVSVANPAFQHG*GKEWLP
Trigger: TGGAAGCCACTCTTTTCCCCAACCATGCTGAAATGC...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCTCTTTCTCGTCTaGACCAGGGACAGATGGCGG +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSLLFLV*TRDRWR
Trigger: CCGCCATCTGTCCCTGGTCCAGACGAGAAAGAGGAG...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCAGCCTGGCCCGTGGCTaGCCCTCGGTTCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCSLARG*PSVLLG
Trigger: CCCCAGGAGAACCGAGGGCCAGCCACGGGCCAGGCT...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467702.3
3UTR CAA 72 bp CGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTaGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTT +
Preference number: 4 (lower is better)
Translates to: RVSLREKSSSSA*QILASLGRMAV
Trigger: AACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CAA 72 bp GTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTaGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTT +
Preference number: 4 (lower is better)
Translates to: VFPPPSRCRPSQ*TMALFPSGSHL
Trigger: AAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CAA 72 bp GAGGCTGCTCCTGAGTTAAAGAAAGCTCCGCCTGAGTaGCAAGAAGGAAACTCCTCAGAGCTCTCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: EAAPELKKAPPE*QEGNSSELSLL
Trigger: GAGCAGAGAGAGCTCTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTTTCTTTAACTCAGGAGCAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CAA 72 bp ATGGTGGGATTTTGGACACAATGGCAGGAGAGAGATTaGGGTGGGAGGCTTGTCAGAATGCACCAGGTTGGC +
Preference number: 4 (lower is better)
Translates to: MVGFWTQWQERD*GGRLVRMHQVG
Trigger: GCCAACCTGGTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAATCCCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGCAAACCTTCAACAGGTaGGGTTTTGAGGCGCCGGCA +
Preference number: 4 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMQTFNR*GFEAPA
Trigger: TGCCGGCGCCTCAAAACCTCACCTGTTGAAGGTTTG...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR TCA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTCATCACGTGGGTTCCTaGCAGCAGCATGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSHHVGS*QQHGVL
Trigger: AAGGACCCCATGCTGCTGTCAGGAACCCACGTGATG...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATCACCAACATCCGTCCTaGGCCCTCCATCACGTGGGT +
Preference number: 4 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHHQHPS*ALHHVG
Trigger: ACCCACGTGATGGAGGGCTCAGGACGGATGTTGGTG...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCCACCAACATCCGTCCTaGGCCCTCCATCACGTGGGT +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCHQHPS*ALHHVG
Trigger: ACCCACGTGATGGAGGGCTCAGGACGGATGTTGGTG...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTACTATCTGCAGCATTTaGAGCTGCCGCACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFTICSI*SCRTVC
Trigger: GCAGACGGTGCGGCAGCTTCAAATGCTGCAGATAGT...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR TCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTGATCACCGTGATGGCTaGCATCACCAAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVDHRDG*HHQARL
Trigger: AAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATC...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGAGGCCAACGAGATGGTaGCGGCCAGAGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVRPTRW*RPEGAP
Trigger: AGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCT...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGTTTTGCAGCACTTCTTaGGCACGATCTCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWFCSTS*ARSQKP
Trigger: GGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAA...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGTTTTGCAGCACTTCTTaGGCACGATCTCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWFCSTS*ARSQKP
Trigger: GGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAA...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCGCTCTCCCGCCCCATTaGGGATTTTGCAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFALPPH*GFCSTS
Trigger: AGAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGC...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTGCTCTCCCGCCCCATTaGGGATTTTGCAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSALPPH*GFCSTS
Trigger: AGAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGC...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATTCATGGTCCTGGAGATaGGCGGCTTGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNSWSWR*AACCGR
Trigger: ACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGA...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTCATGGTCCTGGAGATaGGCGGCTTGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSSWSWR*AACCGR
Trigger: ACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGA...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCTCATGGTCCTGGAGATaGGCGGCTTGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: FCKRGGKCLVFLEAWDIISWSWR*AACCGR
Trigger: ACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGA...GATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGTCATGGTCCTGGAGATaGGCGGCTTGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: EEWILQERRKVFGFPRSMSWSWR*AACCGR
Trigger: ACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGA...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGATGGTGTAATGTTCTaGGGGTGGCGAATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWDGVMF*GWRMQG
Trigger: CCCCTGCATTCGCCACCCTCAGAACATTACACCATC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGCAGTGGAGAGCAGCTaGATGGCTTCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFAVESS*MASLQT
Trigger: AGTTTGGAGGGAAGCCATTCAGCTGCTCTCCACTGC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTGCAGTGGAGAGCAGCTaGATGGCTTCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFAVESS*MASLQT
Trigger: AGTTTGGAGGGAAGCCATTCAGCTGCTCTCCACTGC...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 4 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCCGCTGTTGTTCTTGTTaGGGGATGACGGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCRCCSC*GMTAGS
Trigger: CGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCG...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCCGCTGTTGTTCTTGTTaGGGGATGACGGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCRCCSC*GMTAGS
Trigger: CGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCG...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCCRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSSLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCCCGAGAGGAAAGGTCCAGGAGGGAGAGCACCACAGGCATTACAAAACAGACTTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: PREERSRRESTTGITKQTSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...AGTCTGTTTTGTAATGCCTGTGGTGCTCTCCCTCCTGGACCTTTCCTCTCGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAACCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 4 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATGTAGGCCCTCCCAGTTaGCTATGGCTCTTTTCCCGA +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYVGPPS*LWLFSR
Trigger: TCGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTAC...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGTAGGCCCTCCCAGTTaGCTATGGCTCTTTTCCCGA +
Preference number: 4 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHVGPPS*LWLFSR
Trigger: TCGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTAC...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTGTAGGCCCTCCCAGTTaGCTATGGCTCTTTTCCCGA +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFVGPPS*LWLFSR
Trigger: TCGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTAC...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTCAGGTGATGCGCTCTTaGAGGTCCTCCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVQVMRS*RSSFQE
Trigger: CTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTG...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCTCCAATAAGCACATCTaGGGGCTGGTCACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSISNKHI*GLVTPL
Trigger: CAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGA...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCCAAACACAGCTATCCTaGTGTCATGGAACGAGGTCA +
Preference number: 4 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSQTQLS*CHGTRS
Trigger: TGACCTCGTTCCATGACATCAGGATAGCTGTGTTTG...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTACCTCCTGGCTCCGAATaGACATGGAGCATGGTGTGC +
Preference number: 4 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLPPGSE*TWSMVC
Trigger: GCACACCATGCTCCATGTTCATTCGGAGCCAGGAGG...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGAGCATCCTTCATTCCTaGCAAGAGAAGACCAACGCT +
Preference number: 4 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWSILHS*QEKTNA
Trigger: AGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCT...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCGCTCACCTCCAAAGATaGGTGATTCTGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: SLREKSSSSALQILASLGAHLQR*VILQRQ
Trigger: CTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGC...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTGGCTTAGGGGGCAGGTaGAATGATGGGAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLGLGGR*NDGRNS
Trigger: GCTGTTCCTCCCATCATTTCACCTGCCCCCTAAGCC...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGCTTCCTGCTATTGTCTaGCTTCCCTCCTGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWLPAIV*LPSWLW
Trigger: CCAGAGCCAGGAGGGAAGTCAGACAATAGCAGGAAG...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCACTTGGTTTGGAACTTTaGAAAGGCCTGGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPLGLEL*KGLGTS
Trigger: GGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAG...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCGGAGCTCCTCCATTGTaGACCCGAACTCGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCGAPPL*TRTRPH
Trigger: ATGGGGGCGAGTTCGGGTGCACAATGGAGGAGCTCC...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTTCGCACATCCTTCGTTaGCCTCGCCGGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLSHILR*PRRAGG
Trigger: ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGA...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTCCCCTCGATCCAACCTaGCTCTGCCTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGPLDPT*LCLSFI
Trigger: GATGAAGGAGAGGCAGAGGCAGGTTGGATCGAGGGG...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTGCTCGATGCGGCTCTaGAGGCCCCGGAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCCSMRL*RPRNCF
Trigger: GAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCA...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATGCTCGATGCGGCTCTaGAGGCCCCGGAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: CVQASFIPDKRRPTLMLACSMRL*RPRNCF
Trigger: GAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCA...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCTGCTCGATGCGGCTCTaGAGGCCCCGGAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLCSMRL*RPRNCF
Trigger: GAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCA...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATCATCTCCATGGCGGCTaGCCCGTCCTGTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNHLHGG*PVLLFG
Trigger: GCCAAACAACAGGACGGGGCAGCCGCCATGGAGATG...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGCACGTAGACGGGCGTaGACTCAGGCAGCCACGGCT +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLARRRA*TQAATA
Trigger: AGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGC...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATCCTGTACCACTGTCATaGGATTGGTGGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYPVPLS*DWWSAC
Trigger: GCACGCTGACCACCAATCGCATGACAGTGGTACAGG...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGCCCCCTTGCTGTACATaGGGAAGCTCTCGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSPPCCT*GSSRRA
Trigger: TGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGG...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAATCTCAGAAGCCCCCTTaGTGTACATGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAARESQKPP*CTCGSS
Trigger: AGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGA...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGCACCGGGTCCTCGATaGCCACCACGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVAPGPR*PPRRCR
Trigger: CCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGAGCACCGGGTCCTCGATaGCCACCACGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGAPGPR*PPRRCR
Trigger: CCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGC...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGGCCACGTCAGTGCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVGHVSA*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGTTCACCCAGAGCATCTaGACGGCCTTCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWFTQSI*TAFRGE
Trigger: CTCCCCTCTGAAGGCCGTGCAGATGCTCTGGGTGAA...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGGTTCCGGAAGATaGCGTCAAAGACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGWGSGR*RQRHCA
Trigger: AGCGCAATGTCTTTGACGGCATCTTCCGGAACCCCA...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGGCTTCCCTCCAAACTaGACGATCACTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPGFPPN*TITIWM
Trigger: CATCCAGATAGTGATCGTGCAGTTTGGAGGGAAGCC...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAATCCACTGGTCCAGCTaGAGTGGAGAGCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGIHWSS*SGEQLN
Trigger: ATTCAGCTGCTCTCCACTGCAGCTGGACCAGTGGAT...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: QDATQGKCLLGRAVFIASIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGACCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCTGAGACCCACAAAGTaGTTAGCAGTTAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWLRPTK*LAVKRL
Trigger: CAGCCTCTTAACTGCTAAGCACTTTGTGGGTCTCAG...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATCCCATGTTTTACACGTaGAGATCTTTCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNPMFYT*RSFLPC
Trigger: ACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGG...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTGTGAGAGTGAGGGGGTaGATGTGTGCAAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFVRVRG*MCASIL
Trigger: AAGGATGCTTGCACACATGCACCCCCTCACTCTCAC...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTCAGTGGGGCCCATGCTaGTCCCTGGAACTGGCATCT +
Preference number: 4 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLQWGPC*SLELAS
Trigger: AGATGCCAGTTCCAGGGAGCAGCATGGGCCCCACTG...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCCAGTGGGGCCCATGCTaGTCCCTGGAACTGGCATCT +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCQWGPC*SLELAS
Trigger: AGATGCCAGTTCCAGGGAGCAGCATGGGCCCCACTG...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTATTCAGTGGGGCCCATaGTGCTCCCTGGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSIQWGP*CSLELA
Trigger: TGCCAGTTCCAGGGAGCAGCATGGGCCCCACTGAAT...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTCATGTCACCCATGTTTaGTGCGGTCCTTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: EVSVGPSCFYSISATSVLHVTHV*CGPCSG
Trigger: GCCCGAGCAAGGACCGCAGCAAACATGGGTGACATG...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGATTTCAGAACCACACTaGACGAGTCAGAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERISEPH*TSQKSQ
Trigger: CTGGCTCTTCTGACTCGTGCAGTGTGGTTCTGAAAT...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAAAATTGTATGGCTGGTaGCAGATGAGACACCCAAGT +
Preference number: 4 (lower is better)
Translates to: ALQILASLGRMAVSVANPKLYGW*QMRHPS
Trigger: ACTTGGGTGTCTCATCTGGCACCAGCCATACAATTT...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGGCCTGGGGACTTCCTaGTATTGTCTGACTTCCCTC +
Preference number: 4 (lower is better)
Translates to: NIQDATQGKCLLGRAVFIGLGTS*YCLTSL
Trigger: GAGGGAAGTCAGACAATAGCAGGAAGTCCCCAGGCC...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGGCTGGCGTCCACATTaGCATCCTGCATTTTACCTT +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAGWRPH*HPAFYL
Trigger: AAGGTAAAATGCAGGATGGCAATGTGGACGCCAGCC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452124.2
ENST00000643662.1
CDS-3UTR GCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGACGCGGATGCCCGGCTaGAGCAGGAGGAAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVTRMPG*SRRKAG
Trigger: ACCAGCCTTCCTCCTGCTGCAGCCGGGCATCCGCGT...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000638646.2
CDS-3UTR GCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAGCTCCGAGAGCGAGATaGTGCCGCCGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKAPRAR*CRRRCR
Trigger: GCGGCAGCGGCGGCGGCAGCATCTCGCTCTCGGAGC...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCCGAACTCGCCCCCATaGCTCGACTCATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFPNSPP*LDSFLW
Trigger: CCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGTCAGCCACAGGGATCTaGACCACCTGGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVSATGI*TTWPAR
Trigger: CCGGGCTGGCCAGGTGGTCCAGATCCCTGTGGCTGA...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGTCACCATATTTGACCTaGGCTATGTCCCCAACCACG +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWSPYLT*AMSPTT
Trigger: CGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGA...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAATTCCTGACAGCAGCATaGGGTCCTTGTCCACGGACT +
Preference number: 4 (lower is better)
Translates to: VMERGHGHMTDQRSGEMEFLTAA*GPCPRT
Trigger: AGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAA...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTTTCCTGACAGCAGCATaGGGTCCTTGTCCACGGACT +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSFLTAA*GPCPRT
Trigger: AGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAA...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTCCTGACAGCAGCATaGGGTCCTTGTCCACGGACT +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWFLTAA*GPCPRT
Trigger: AGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAA...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTCCTGACAGCAGCATaGGGTCCTTGTCCACGGACT +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYFLTAA*GPCPRT
Trigger: AGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAA...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGTGTTTGGCTTTGCTCTaGCTGGCGTCCACATTGCCA +
Preference number: 4 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVCLALL*LASTLP
Trigger: TGGCAATGTGGACGCCAGCCAGAGCAAAGCCAAACA...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360273.7
CDS-3UTR CCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGCCTTCTTGTGCATGCTaGCCTTCTTCCTGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPPSCAC*PSSCRQ
Trigger: CTGACGACAGGAAGAAGGCCAGCATGCACAAGAAGG...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACCCTTCTTGTGCATGCTaGCCTTCTTCCTGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYPSCAC*PSSCRQ
Trigger: CTGACGACAGGAAGAAGGCCAGCATGCACAAGAAGG...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAATCTTGTCTGAGCAGATaGCTGTGGCATTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAARESCLSR*LWHCPW
Trigger: CCATGGGCAATGCCACAGCCATCTGCTCAGACAAGA...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCGGCGCCCTCCTTCTCTaGGGGCAGAATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCGALLL*GQNLGG
Trigger: ACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCC...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGGGCGCCCTCCTTCTCTaGGGGCAGAATCTTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLGALLL*GQNLGG
Trigger: ACCACCAAGATTCTGCCCCCAGAGAAGGAGGGCGCC...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGGCTTCTGGGACCTCTaGCCGCACCGGGTCCTCGAT +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVGFWDL*PHRVLD
Trigger: ATCGAGGACCCGGTGCGGCCAGAGGTCCCAGAAGCC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGGTATGCTTGTCCGTTaGGGAGGAGCGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGGMLVR*GGASQH
Trigger: GTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACC...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTTGCCTGCGATGCCCATaGCGAAGCCCACGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLCLRCP*RSPRRP
Trigger: AGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCA...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCACGTTGACGGTGAGCTaGAACTGCAAGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSTLTVS*NCKNLE
Trigger: CTCCAAATTCTTGCAGTTCCAGCTCACCGTCAACGT...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTGCAGCAGGGTCTCCGTaGGCGGCTCAGTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSAAGSP*AAQWPV
Trigger: CACTGGCCACTGAGCCGCCCACGGAGACCCTGCTGC...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGACTCCCGCTGTCGATCTaGAACATCTTCTCGCCAACA +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGLPLSI*NIFSPT
Trigger: TGTTGGCGAGAAGATGTTCCAGATCGACAGCGGGAG...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGCGATCACTATCTGGATaGCAAAGGTGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMRSLSG*QRCPAR
Trigger: TCGTGCTGGGCACCTTTGCCATCCAGATAGTGATCG...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAACGATCACTATCTGGATaGCAAAGGTGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAARERSLSG*QRCPAR
Trigger: TCGTGCTGGGCACCTTTGCCATCCAGATAGTGATCG...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTCGATCACTATCTGGATaGCAAAGGTGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTRSLSG*QRCPAR
Trigger: TCGTGCTGGGCACCTTTGCCATCCAGATAGTGATCG...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCGATCACTATCTGGATaGCAAAGGTGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWRSLSG*QRCPAR
Trigger: TCGTGCTGGGCACCTTTGCCATCCAGATAGTGATCG...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGTGCACGATCACTATCTaGATGGCAAAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVCTITI*MAKVPS
Trigger: GCTGGGCACCTTTGCCATCCAGATAGTGATCGTGCA...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGCACGATCACTATCTaGATGGCAAAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGCTITI*MAKVPS
Trigger: GCTGGGCACCTTTGCCATCCAGATAGTGATCGTGCA...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCATGCACCACATCCACTaGTCCAGCTGCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFMHHIH*SSCSGE
Trigger: CTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCAT...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTATGGTGGCGATGACCTaGCCCCAAACGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVMVAMT*PQTSSP
Trigger: AGGAGAGCTCGTTTGGGGCCAGGTCATCGCCACCAT...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGTCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWSPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCATGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAACGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VSVVRLIPLSMALLFLLRERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...CCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCGATGGCGCTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: SMALLFLLRDDGGLEFCLVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGATCTACCTATCTATATaGACGTATACAGTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLIYLSI*TYTVSE
Trigger: TTCCGAGACTGTATACGTCCATATAGATAGGTAGAT...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGAGATCCTGGCATCCTTaGGCCGGATGGCCGTTAGTG +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWRSWHP*AGWPLV
Trigger: CACTAACGGCCATCCGGCCCAAGGATGCCAGGATCT...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGGTGCTTTGCAGATCCTaGCATCCTTGGGCCGGATGG +
Preference number: 4 (lower is better)
Translates to: ICHLLLEPLSRGQKRSYVVLCRS*HPWAGW
Trigger: CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCAC...CACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGAATGGCTTTCTGTTTaGGAAAGCAAGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNEWLSV*ESKTCC
Trigger: ACAGCAAGTCTTGCTTTCCCAAACAGAAAGCCATTC...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ATTCTGCAGCGCCAGGAGTCACTGAACGGGCTCCCTGCCCTTCCCTCATCTGTTTGTAGGGTTTCAGAATaGCTTTCTGTTTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: ILQRQESLNGLPALPSSVCRVSE*LSVWES
Trigger: GCTTTCCCAAACAGAAAGCCATTCTGAAACCCTACA...AACAGATGAGGGAAGGGCAGGGAGCCCGTTCAGTGACTCCTGGCGCTGCAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTGAGGCGGAAAGTGTTTaGTTTTCCTCGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMAEAESV*FSSKHG
Trigger: CCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTC...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCGGTCAGCATGAGGAATaGATTTTGCAAGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSGQHEE*ILQERR
Trigger: CCGCCTCTCTTGCAAAATCCATTCCTCATGCTGACC...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCTGTGGAAGAGTTCTCTaGGCCTGGAGAAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFCGRVL*AWRREG
Trigger: CCCTTCCCTTCTCCAGGCCCAGAGAACTCTTCCACA...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTGTGGAAGAGTTCTCTaGGCCTGGAGAAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYCGRVL*AWRREG
Trigger: CCCTTCCCTTCTCCAGGCCCAGAGAACTCTTCCACA...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGGCTCTTTTCCCGAGTaGCTCTCATCTTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWGSFPE*LSSCLW
Trigger: CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGGAGGATTTTGCCAGGTaGGATGGGCTGACTTTGAAC +
Preference number: 4 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWEDFAR*DGLTLN
Trigger: GTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTC...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CTCCCTGGACTTGAAGAGGTAGCTGATTTGCTTGTGTCGGTCGTCAGGTTGATCGTGGGCTGGCTTTGGTaGCGTTTGTACTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: LPGLEEVADLLVSVVRLIVGWLW*RLYWNP
Trigger: TGGATTCCAGTACAAACGCCACCAAAGCCAGCCCAC...GATCAACCTGACGACCGACACAAGCAAATCAGCTACCTCTTCAAGTCCAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CCA 90 bp CTCCCTGGACTTGAAGAGGTAGCTGATTTGCTTGTGTCGGTCGTCAGGTTGATCGCAGTGGGCTGGCTTTaGTGGCGTTTGTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: LPGLEEVADLLVSVVRLIAVGWL*WRLYWN
Trigger: ATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGC...GATCAACCTGACGACCGACACAAGCAAATCAGCTACCTCTTCAAGTCCAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGGCAGTGGGCTGGCTTTaGTGGCGTTTGTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVAVGWL*WRLYWN
Trigger: ATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGC...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTGCAGTGGGCTGGCTTTaGTGGCGTTTGTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFAVGWL*WRLYWN
Trigger: ATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGC...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTAGGAGAGCAGTGGGCTaGCTTTGGTGGCGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTRRAVG*LWWRLY
Trigger: GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCT...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCTTGTAGGAGAGCAGTaGGCTGGCTTTGGTGGCGTT +
Preference number: 4 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFLVGEQ*AGFGGV
Trigger: AACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAG...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACACTGAGAACCCCTCCTaGCTCCGAATGAACATGGAG +
Preference number: 4 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYTENPS*LRMNME
Trigger: CTCCATGTTCATTCGGAGCCAGGAGGGGTTCTCAGT...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTGCCCATGCTGCTCCCTaGAACTGGCATCTACATGGT +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSAHAAP*NWHLHG
Trigger: ACCATGTAGATGCCAGTTCCAGGGAGCAGCATGGGC...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGTCAGCACACCCTCACTaGTCAGCTGTGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: EEWILQERRKVFGFPRSMSAHPH*SAVAPG
Trigger: GCCTGGTGCCACAGCTGACCAGTGAGGGTGTGCTGA...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp ATTCTGCAGCGCCAGGAGTCACTGAACGGGCTCCCTGCCCTTCCCTCATCTGTTAGTAAAAGTCGCTGTTaGTCATGTCACCCATGTTTG +
Preference number: 4 (lower is better)
Translates to: ILQRQESLNGLPALPSSVSKSRC*SCHPCL
Trigger: CAAACATGGGTGACATGACCAACAGCGACTTTTACT...AACAGATGAGGGAAGGGCAGGGAGCCCGTTCAGTGACTCCTGGCGCTGCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGTCTGCCACTTACTCCTaGAGCCCTTGTCTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVSATYS*SPCLED
Trigger: GTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGA...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCGGAGAGAGATTTGGGTaGGAGGCTTGTCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSGERFG*EACQNA
Trigger: TGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCC...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAAGAGGTGTCAGGGTCTaGAAACTGGGGCCCATGTCT +
Preference number: 4 (lower is better)
Translates to: QGCPMFYTCRSFLPCRRARGVRV*KLGPMS
Trigger: AGACATGGGCCCCAGTTTCCAGACCCTGACACCTCT...TGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS-3UTR CCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGGGCCCTCGGTTCTCCTaGGGTTACTTATTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMGPRFS*GYLFLC
Trigger: ACAGAGGAATAAGTAACCCCAGGAGAACCGAGGGCC...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467702.3
CDS-3UTR TCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTGACCACACAGATAACTaGGAGGAGAATGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARDHTDN*EENGGP
Trigger: GGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTC...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCGACCACACAGATAACTaGGAGGAGAATGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCDHTDN*EENGGP
Trigger: GGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTC...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGGAGGTCACCATATTTaGCCTGGGCTATGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAGGHHI*PGLCPQ
Trigger: TTGGGGACATAGCCCAGGTCAAATATGGTGACCTCC...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCCATCACGTGGGTTCCTaGCAGCAGCATGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCHHVGS*QQHGVL
Trigger: AAGGACCCCATGCTGCTGTCAGGAACCCACGTGATG...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCATCACGTGGGTTCCTaGCAGCAGCATGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVHHVGS*QQHGVL
Trigger: AAGGACCCCATGCTGCTGTCAGGAACCCACGTGATG...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTACTATCTGCAGCATTTaGAGCTGCCGCACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLTICSI*SCRTVC
Trigger: GCAGACGGTGCGGCAGCTTCAAATGCTGCAGATAGT...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
CDS-3UTR TCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTCCTGCATTTTACCATTaGCTAGGCTGGCATTCGCAC +
Preference number: 4 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFPAFYH*LGWHSH
Trigger: GTGCGAATGCCAGCCTAGTCAATGGTAAAATGCAGG...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
CDS-3UTR TCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCGATCACCGTGATGGCTaGCATCACCAAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCDHRDG*HHQARL
Trigger: AAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATC...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGGATCACCGTGATGGCTaGCATCACCAAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSDHRDG*HHQARL
Trigger: AAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATC...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCGATCACCGTGATGGCTaGCATCACCAAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCDHRDG*HHQARL
Trigger: AAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATC...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCCACGGCTTCTTGTTaGCCACGAAGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVATASC*PRRCPQ
Trigger: CTGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGC...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGGCCACGGCTTCTTGTTaGCCACGAAGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSATASC*PRRCPQ
Trigger: CTGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGC...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACAAGGCCAACGAGATGGTaGCGGCCAGAGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTRPTRW*RPEGAP
Trigger: AGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCT...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTTGCAGCACTTCTTaGGCACGATCTCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGFCSTS*ARSQKP
Trigger: GGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAA...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTTGCGGATCCTCCTGTTaGACTCCTTGCCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVACGSSC*TPCPRG
Trigger: GCCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCA...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGATGGTGTAATGTTCTaGGGGTGGCGAATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGDGVMF*GWRMQG
Trigger: CCCCTGCATTCGCCACCCTCAGAACATTACACCATC...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGATGGTGTAATGTTCTaGGGGTGGCGAATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWDGVMF*GWRMQG
Trigger: CCCCTGCATTCGCCACCCTCAGAACATTACACCATC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGCTCTCCTAACCCAATaGATATGCACCACATCCACT +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWALLTQ*ICTTST
Trigger: AGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGTTCACTCTCTCTTGCTaGACTCTGTGTCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPFTLSC*TLCPGF
Trigger: GAACCCTGGACACAGAGTTCAGCAAGAGAGAGTGAA...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS-3UTR TCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCGTTCTTGTTGAGGGATaGCGGCGGGCTCGAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCVLVEG*RRARVL
Trigger: CAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAAC...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVSLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCCCGAGAGGAAAGGTCCAGGAGGGAGAGCACCACAGGCATTACAAAACAGACTCCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 4 (lower is better)
Translates to: PREERSRRESTTGITKQTPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...AGTCTGTTTTGTAATGCCTGTGGTGCTCTCCCTCCTGGACCTTTCCTCTCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGCATTTGGCTTCTGCCTaGGCCTCTCACGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSHLASA*ASHGSD
Trigger: GTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATG...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR TCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGAGCAGCAAGCCATACTaGTCCTCATCCAATATGCCA +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWSSKPY*SSSNMP
Trigger: TGGCATATTGGATGAGGATCAGTATGGCTTGCTGCT...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTAGGCCCTCCCAGTTaGCTATGGCTCTTTTCCCGA +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWVGPPS*LWLFSR
Trigger: TCGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTAC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGAACCAAATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAACAGGTGATGCGCTCTTaGAGGTCCTCCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: RTKSATYSWSPCLEDRKEQVMRS*RSSFQE
Trigger: CTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTG...TTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATCAGGTGATGCGCTCTTaGAGGTCCTCCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHQVMRS*RSSFQE
Trigger: CTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTG...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTTTCACGACATTCAGGTaGTGCGCTCTTGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: QDATQGKCLLGRAVFIASFTTFR*CALEGP
Trigger: AGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAA...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCTTCACGACATTCAGGTaGTGCGCTCTTGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLFTTFR*CALEGP
Trigger: AGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAA...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAATCCAATAAGCACATCTaGGGGCTGGTCACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VMERGHGHMTDQRSGEMESNKHI*GLVTPL
Trigger: CAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGA...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTTCCAATAAGCACATCTaGGGGCTGGTCACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSSNKHI*GLVTPL
Trigger: CAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGA...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCAGAGGTCACGGACACATaGCTGATCAAAGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSEVTDT*LIKEVG
Trigger: CCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTC...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCCCTCCTGGCTCCGAATaGACATGGAGCATGGTGTGC +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCPPGSE*TWSMVC
Trigger: GCACACCATGCTCCATGTTCATTCGGAGCCAGGAGG...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAGGTGGCTCTTGGCTATaGAAATCACCACCAATCCTG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREGGSWL*KSPPIL
Trigger: CAGGATTGGTGGTGATTTTCATAGCCAAGAGCCACC...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR TCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGCAAGAGGCTGCCGGGTaGTGGCTGCTTGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVQEAAG*WLLVAV
Trigger: GACAGCCACAAGCAGCCATCACCCGGCAGCCTCTTG...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTCTGCTGCTGGTAGCTaGAGGCCATCCCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARSAAGS*RPSPFF
Trigger: GAAGAAGGGGGATGGCCTTCAGCTACCAGCAGCAGA...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360273.7
ENST00000645850.1
CDS-3UTR TCA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTAGCGCCAGGAGTCACTaGACGGGCTCCCTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCSARSH*TGSLPF
Trigger: GAAGGGCAGGGAGCCCGTTCAGTGACTCCTGGCGCT...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp TTTTGGACACAATGGCAGGAGAGAGATTTGGGTGGGAGGCTTGTCAGAATGCACAATGGAGGCTGCTCCTaGGTTAAAGAAAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: FWTQWQERDLGGRLVRMHNGGCS*VKESSA
Trigger: GGCGGAGCTTTCTTTAACTCAGGAGCAGCCTCCATT...GTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTGTTAGCAAAGTGTGGTaGCCCCCGAGAGGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: EVSVGPSCFYSISATSVLVSKVW*PPRGKV
Trigger: GACCTTTCCTCTCGGGGGTCACCACACTTTGCTAAC...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCCCCCTCGATCCAACCTaGCTCTGCCTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCPLDPT*LCLSFI
Trigger: GATGAAGGAGAGGCAGAGGCAGGTTGGATCGAGGGG...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTCCTTGTCCACGGACTTaGGCACCTGGTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGPCPRT*APGQTL
Trigger: GAGAGTCTGACCAGGTGCGCAAGTCCGTGGACAAGG...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCATCTCCATGGCGGCTaGCCCGTCCTGTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAHLHGG*PVLLFG
Trigger: GCCAAACAACAGGACGGGGCAGCCGCCATGGAGATG...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGCCCGCCTTCCCGATCTaGACAGCCAGCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVPAFPI*TASLVS
Trigger: GCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGG...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTCCTGTACCACTGTCATaGGATTGGTGGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSPVPLS*DWWSAC
Trigger: GCACGCTGACCACCAATCGCATGACAGTGGTACAGG...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGCCTGTACCACTGTCATaGGATTGGTGGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWPVPLS*DWWSAC
Trigger: GCACGCTGACCACCAATCGCATGACAGTGGTACAGG...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAATCTCAGAAGCCCCCTTaGTGTACATGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: VMERGHGHMTDQRSGEMESQKPP*CTCGSS
Trigger: AGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGA...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATATCTCAGAAGCCCCCTTaGTGTACATGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: NIQDATQGKCLLGRAVFISQKPP*CTCGSS
Trigger: AGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGA...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGTCTCAGAAGCCCCCTTaGTGTACATGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMSQKPP*CTCGSS
Trigger: AGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGA...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTTCTCAGAAGCCCCCTTaGTGTACATGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFSQKPP*CTCGSS
Trigger: AGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGA...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAGCACCGGGTCCTCGATaGCCACCACGCAGATGCAGG +
Preference number: 4 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKAPGPR*PPRRCR
Trigger: CCTGCATCTGCGTGGTGGGCATCGAGGACCCGGTGC...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGTTGTCAATTCGCTCCTaGTCAATCTCCCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWLSIRS*SISPFS
Trigger: CGAGAAGGGGGAGATTGAGCAGGAGCGAATTGACAA...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCTTTAACCAGGGTATaGTTGTCCGTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSPLTRV*LSVGEE
Trigger: CTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGG...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTCCTTTAACCAGGGTATaGTTGTCCGTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFPLTRV*LSVGEE
Trigger: CTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGG...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAAGTCACGGCCACCACCTaGCGCTGCTCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKVTATT*RCSVCV
Trigger: CACACACACTGAGCAGCGGCAGGTGGTGGCCGTGAC...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGTCACGGCCACCACCTaGCGCTGCTCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVVTATT*RCSVCV
Trigger: CACACACACTGAGCAGCGGCAGGTGGTGGCCGTGAC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGAGTCGGCCTTCTTGAGTaGAGGCCCGTCGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGVGLLE*RPVVGP
Trigger: GGGACCAACGACGGGCCTGCACTCAAGAAGGCCGAC...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCATGGGGTTCCGGAAGATaGCGTCAAAGACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAWGSGR*RQRHCA
Trigger: AGCGCAATGTCTTTGACGGCATCTTCCGGAACCCCA...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGGGGTTCCGGAAGATaGCGTCAAAGACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFWGSGR*RQRHCA
Trigger: AGCGCAATGTCTTTGACGGCATCTTCCGGAACCCCA...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTATCCACTGGTCCAGCTaGAGTGGAGAGCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSIHWSS*SGEQLN
Trigger: ATTCAGCTGCTCTCCACTGCAGCTGGACCAGTGGAT...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGTGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTGATCCTCATCCAATATaGCAACAGCTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMADPHPI*QQLRCC
Trigger: GCAGCATCTGAGCTGTTGGCATATTGGATGAGGATC...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGACCATGTTCCAAGGCTaGCCCATGTTTTACACGTGC +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWTMFQG*PMFYTC
Trigger: GCACGTGTAAAACATGGGGCAGCCTTGGAACATGGT...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGAGGGGGTGCATGTGTaGAAGCATCCTTCATTCCTG +
Preference number: 4 (lower is better)
Translates to: QGCPMFYTCRSFLPCRRAEGVHV*KHPSFL
Trigger: CAGGAATGAAGGATGCTTGCACACATGCACCCCCTC...TGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTGTGAGAGTGAGGGGGTaGATGTGTGCAAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTVRVRG*MCASIL
Trigger: AAGGATGCTTGCACACATGCACCCCCTCACTCTCAC...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGCCTAATGGAGTGAACTaGCAAACGTACCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVPNGVN*QTYPML
Trigger: CAGCATGGGGTACGTTTGGCAGTTCACTCCATTAGG...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGATTCAGTGGGGCCCATaGTGCTCCCTGGAACTGGCA +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSIQWGP*CSLELA
Trigger: TGCCAGTTCCAGGGAGCAGCATGGGCCCCACTGAAT...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTCTGCCGGGTGATGGCTaGTTGTGGCTGTCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVALPGDG*LWLSSA
Trigger: TGCTGAGGACAGCCACAAGCAGCCATCACCCGGCAG...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATACGCTGGACAAGAGGCTaGCGGGTGATGGCTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWIRWTRG*RVMAAC
Trigger: ACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCG...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGGTTTGCTGCGGTCCTTaGTCGGGCTGGGCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQVCCGP*SGWAQG
Trigger: CCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAAC...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp TTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCCATGTCACCCATGTTTaGTGCGGTCCTTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: FCKRGGKCLVFLEAWDIIHVTHV*CGPCSG
Trigger: GCCCGAGCAAGGACCGCAGCAAACATGGGTGACATG...GATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCCATGTCACCCATGTTTaGTGCGGTCCTTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCHVTHV*CGPCSG
Trigger: GCCCGAGCAAGGACCGCAGCAAACATGGGTGACATG...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAAAGCTCCGCCTGAGTTaGAAGAAGGAAACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGKLRLS*KKETPQ
Trigger: CTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTT...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCAGGCAAGAACTGCCTaGATCCCAAAGGTACTGGAG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFQARTA*IPKVLE
Trigger: CTCCAGTACCTTTGGGATGCAGGCAGTTCTTGCCTG...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTGGAGGCTTGTCAGAATaGACCAGGTTGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLGGLSE*TRLAAS
Trigger: GGAGGCTGCCAACCTGGTGCATTCTGACAAGCCTCC...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGGCCTGGGGACTTCCTaGTATTGTCTGACTTCCCTC +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGGLGTS*YCLTSL
Trigger: GAGGGAAGTCAGACAATAGCAGGAAGTCCCCAGGCC...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCGGCTGGCGTCCACATTaGCATCCTGCATTTTACCTT +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLGWRPH*HPAFYL
Trigger: AAGGTAAAATGCAGGATGGCAATGTGGACGCCAGCC...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452124.2
ENST00000643662.1
CDS-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTCCGAACTCGCCCCCATaGCTCGACTCATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGPNSPP*LDSFLW
Trigger: CCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGTCACCATATTTGACCTaGGCTATGTCCCCAACCACG +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMSPYLT*AMSPTT
Trigger: CGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGA...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATCACCATATTTGACCTaGGCTATGTCCCCAACCACG +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGSPYLT*AMSPTT
Trigger: CGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGA...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCTGACAGCAGCATaGGGTCCTTGTCCACGGACT +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGFLTAA*GPCPRT
Trigger: AGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAA...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATGAGCCCTCCATCACGTaGGTTCCTGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHEPSIT*VPDSSM
Trigger: CATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTC...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATGAGCCCTCCATCACGTaGGTTCCTGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNEPSIT*VPDSSM
Trigger: CATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTC...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGCCCCGTCCTGTTGTTTaGCTTTGCTCTGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLPRPVV*LCSGWR
Trigger: ACGCCAGCCAGAGCAAAGCCAAACAACAGGACGGGG...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCCCCCGTCCTGTTGTTTaGCTTTGCTCTGGCTGGCGT +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCPRPVV*LCSGWR
Trigger: ACGCCAGCCAGAGCAAAGCCAAACAACAGGACGGGG...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATCCTTCTTGTGCATGCTaGCCTTCTTCCTGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYPSCAC*PSSCRQ
Trigger: CTGACGACAGGAAGAAGGCCAGCATGCACAAGAAGG...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTCCTTCTTGTGCATGCTaGCCTTCTTCCTGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFPSCAC*PSSCRQ
Trigger: CTGACGACAGGAAGAAGGCCAGCATGCACAAGAAGG...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTTCTTGTCTGAGCAGATaGCTGTGGCATTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSSCLSR*LWHCPW
Trigger: CCATGGGCAATGCCACAGCCATCTGCTCAGACAAGA...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCGTACAACTTCTCCTCTaGCATCTGGCTGCGCACGGG +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCVQLLL*HLAAHG
Trigger: CCCGTGCGCAGCCAGATGCCAGAGGAGAAGTTGTAC...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATGTACAACTTCTCCTCTaGCATCTGGCTGCGCACGGG +
Preference number: 4 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNVQLLL*HLAAHG
Trigger: CCCGTGCGCAGCCAGATGCCAGAGGAGAAGTTGTAC...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGGTATGCTTGTCCGTTaGGGAGGAGCGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAGMLVR*GGASQH
Trigger: GTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACC...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAGTGCAGGCCCGTCGTTaGTCCCGTCCCCCGTCACGG +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKVQARR*SRPPSR
Trigger: CCGTGACGGGGGACGGGACCAACGACGGGCCTGCAC...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTTGCCTGCGATGCCCATaGCGAAGCCCACGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSCLRCP*RSPRRP
Trigger: AGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCA...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATACGATCACTATCTGGATaGCAAAGGTGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: NIQDATQGKCLLGRAVFIRSLSG*QRCPAR
Trigger: TCGTGCTGGGCACCTTTGCCATCCAGATAGTGATCG...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTGCACGATCACTATCTaGATGGCAAAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYCTITI*MAKVPS
Trigger: GCTGGGCACCTTTGCCATCCAGATAGTGATCGTGCA...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTATGCACCACATCCACTaGTCCAGCTGCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGMHHIH*SSCSGE
Trigger: CTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCAT...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGATGCACCACATCCACTaGTCCAGCTGCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWMHHIH*SSCSGE
Trigger: CTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCAT...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTATGGTGGCGATGACCTaGCCCCAAACGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCMVAMT*PQTSSP
Trigger: AGGAGAGCTCGTTTGGGGCCAGGTCATCGCCACCAT...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTATGGTGGCGATGACCTaGCCCCAAACGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGMVAMT*PQTSSP
Trigger: AGGAGAGCTCGTTTGGGGCCAGGTCATCGCCACCAT...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGACTTCAATCTGTGTCTaGATCCGATTCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMTSICV*IRFRPR
Trigger: CCGAGGCCTGAATCGGATCCAGACACAGATTGAAGT...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAACTTCAATCTGTGTCTaGATCCGATTCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGTSICV*IRFRPR
Trigger: CCGAGGCCTGAATCGGATCCAGACACAGATTGAAGT...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATGCTACATCCTGGCTCTaGCTGGTGACCGAGGACTGT +
Preference number: 4 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNATSWL*LVTEDC
Trigger: ACAGTCCTCGGTCACCAGCCAGAGCCAGGATGTAGC...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCATCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIASMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTTCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSSMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: QASFIPDKRRPTLMLAFFSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...GAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: EKSSSSALQILASLGRMACGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...GGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIARKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: NIQDATQGKCLLGRAVFIRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAAAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: VMERGHGHMTDQRSGEMERKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTTGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTTGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGACATCCTTGGGCCGGATaGCCGTTAGTGTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGHPWAG*PLVLQT
Trigger: GGTTTGCAACACTAACGGCCATCCGGCCCAAGGATG...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATAGATCCTGGCATCCTTaGGCCGGATGGCCGTTAGTG +
Preference number: 4 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHRSWHP*AGWPLV
Trigger: CACTAACGGCCATCCGGCCCAAGGATGCCAGGATCT...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCAGATCCTGGCATCCTTaGGCCGGATGGCCGTTAGTG +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCRSWHP*AGWPLV
Trigger: CACTAACGGCCATCCGGCCCAAGGATGCCAGGATCT...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCAGTGCTTTGCAGATCCTaGCATCCTTGGGCCGGATGG +
Preference number: 4 (lower is better)
Translates to: CVQASFIPDKRRPTLMLAVLCRS*HPWAGW
Trigger: CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCAC...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAGGTCAGCATGAGGAATaGATTTTGCAAGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGGQHEE*ILQERR
Trigger: CCGCCTCTCTTGCAAAATCCATTCCTCATGCTGACC...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGGGTCAGCATGAGGAATaGATTTTGCAAGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPGQHEE*ILQERR
Trigger: CCGCCTCTCTTGCAAAATCCATTCCTCATGCTGACC...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGGGCTGGTCACCCCTTTaGTTATGCAGTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMGWSPL*LCSSSP
Trigger: AGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCC...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGGCTGGTCACCCCTTTaGTTATGCAGTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAGWSPL*LCSSSP
Trigger: AGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCC...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCGGCTGGTCACCCCTTTaGTTATGCAGTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLREKSSSSALQILASLGGWSPL*LCSSSP
Trigger: AGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCC...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAAGCACATCTGAGGGCTaGTCACCCCTTTGGTTATGC +
Preference number: 4 (lower is better)
Translates to: NIQDATQGKCLLGRAVFISTSEG*SPLWLC
Trigger: GCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCT...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAATGGTGGCGTTTGTACTaGAATCCAATAAGCACATCT +
Preference number: 4 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQWWRLY*NPISTS
Trigger: AGATGTGCTTATTGGATTCCAGTACAAACGCCACCA...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCTGGTGGCGTTTGTACTaGAATCCAATAAGCACATCT +
Preference number: 4 (lower is better)
Translates to: EKSSSSALQILASLGRMAWWRLY*NPISTS
Trigger: AGATGTGCTTATTGGATTCCAGTACAAACGCCACCA...GGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGTGGGCTGGCTTTGGTaGCGTTTGTACTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWVGWLW*RLYWNP
Trigger: TGGATTCCAGTACAAACGCCACCAAAGCCAGCCCAC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGTGGGCTGGCTTTGGTaGCGTTTGTACTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: NIQDATQGKCLLGRAVFIVGWLW*RLYWNP
Trigger: TGGATTCCAGTACAAACGCCACCAAAGCCAGCCCAC...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTACTGAGAACCCCTCCTaGCTCCGAATGAACATGGAG +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSTENPS*LRMNME
Trigger: CTCCATGTTCATTCGGAGCCAGGAGGGGTTCTCAGT...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTCTACATGGTCAGGGGTaGTGGCTCTTGGCTATGAAA +
Preference number: 4 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTLHGQG*WLLAMK
Trigger: TTTCATAGCCAAGAGCCACCACCCCTGACCATGTAG...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR CCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAAGAACTGGCATCTACATaGTCAGGGGTGGTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: FSRVALILFVEEFSGPGEELAST*SGVVAL
Trigger: AAGAGCCACCACCCCTGACCATGTAGATGCCAGTTC...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR CCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCTGCTCCCTGGAACTaGCATCTACATGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGAAPWN*HLHGQG
Trigger: CCCCTGACCATGTAGATGCCAGTTCCAGGGAGCAGC...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGGCCCATGCTGCTCCCTaGAACTGGCATCTACATGGT +
Preference number: 4 (lower is better)
Translates to: ICHLLLEPLSRGQKRSYVAHAAP*NWHLHG
Trigger: ACCATGTAGATGCCAGTTCCAGGGAGCAGCATGGGC...CACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTCTCACTGGTCAGCTGTaGCACCAGGCGGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSLTGQL*HQAADS
Trigger: GGAGTCGGCCGCCTGGTGCCACAGCTGACCAGTGAG...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCACGCGGATCTGTGTCTaGATCCGATTCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCTRICV*IRFRPR
Trigger: CCGAGGCCTGAATCGGATCCAGACACAGATCCGCGT...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000467702.3
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGACGCGGATCTGTGTCTaGATCCGATTCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLTRICV*IRFRPR
Trigger: CCGAGGCCTGAATCGGATCCAGACACAGATCCGCGT...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000467702.3
ENST00000644553.1
CDS-3UTR CCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTTCTGCCACTTACTCCTaGAGCCCTTGTCTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSSATYS*SPCLED
Trigger: GTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGA...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGCTTCCAACAACTaGAGGACCCAGGACAAGACA +
Preference number: 4 (lower is better)
Translates to: QGCPMFYTCRSFLPCRRAVASNN*RTQDKT
Trigger: TGTCTTGTCCTGGGTCCTCCAGTTGTTGGAAGCCAC...TGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTCAGGTAGCGCAAGAGTaGGCTAGGGGAGTGAGGGTT +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARQVAQE*ARGVRV
Trigger: AACCCTCACTCCCCTAGCCCACTCTTGCGCTACCTG...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGGGATTTTGGACACAATaGCAGGAGAGAGATTTGGGT +
Preference number: 4 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERGFWTQ*QERDLG
Trigger: ACCCAAATCTCTCTCCTGCCATTGTGTCCAAAATCC...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGAACTTTGAAAAGGCCTaGGGACTTCCTGCTATTGTC +
Preference number: 4 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWNFEKA*GLPAIV
Trigger: GACAATAGCAGGAAGTCCCCAGGCCTTTTCAAAGTT...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTCCCTCCTCCCCCACCTaGGTTGGTATGATCTCTACA +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGPSSPT*VGMIST
Trigger: TGTAGAGATCATACCAACCCAGGTGGGGGAGGAGGG...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATACATGGTCAGGGGTGGTaGCTCCCCTCCACGTCTTCT +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWIHGQGW*LPSTSS
Trigger: AGAAGACGTGGAGGGGAGCCACCACCCCTGACCATG...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000460129.5
ENST00000646379.1
CDS-3UTR TCA 90 bp AGAACCAAATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAACAAACCTTCAACAGGTaGGGTTTTGAGGCGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RTKSATYSWSPCLEDRKEQTFNR*GFEAPA
Trigger: TGCCGGCGCCTCAAAACCTCACCTGTTGAAGGTTTG...TTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTGACCACACAGATAACTaGGAGGAGAATGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVADHTDN*EENGGP
Trigger: GGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTC...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTGGAGGTCACCATATTTaGCCTGGGCTATGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVGGHHI*PGLCPQ
Trigger: TTGGGGACATAGCCCAGGTCAAATATGGTGACCTCC...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGGAGGTCACCATATTTaGCCTGGGCTATGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWGGHHI*PGLCPQ
Trigger: TTGGGGACATAGCCCAGGTCAAATATGGTGACCTCC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCGGTCATTGCCCTGGATaGAGAGGCCGTCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVGHCPG*RGRRQG
Trigger: TCCCTGCCGACGGCCTCTTCATCCAGGGCAATGACC...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR TCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCATCACGTGGGTTCCTaGCAGCAGCATGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAHHVGS*QQHGVL
Trigger: AAGGACCCCATGCTGCTGTCAGGAACCCACGTGATG...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGCACCAACATCCGTCCTaGGCCCTCCATCACGTGGGT +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVHQHPS*ALHHVG
Trigger: ACCCACGTGATGGAGGGCTCAGGACGGATGTTGGTG...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCACTATCTGCAGCATTTaGAGCTGCCGCACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCTICSI*SCRTVC
Trigger: GCAGACGGTGCGGCAGCTTCAAATGCTGCAGATAGT...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR TCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATCCTGCATTTTACCATTaGCTAGGCTGGCATTCGCAC +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYPAFYH*LGWHSH
Trigger: GTGCGAATGCCAGCCTAGTCAATGGTAAAATGCAGG...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR TCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAGATCACCGTGATGGCTaGCATCACCAAGCCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWIDHRDG*HHQARL
Trigger: AAGGCGGGCTTGGTGATGTCAGCCATCACGGTGATC...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCATTTTGCAGCACTTCTTaGGCACGATCTCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QGCPMFYTCRSFLPCRRAFCSTS*ARSQKP
Trigger: GGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAA...TGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCATTTTGCAGCACTTCTTaGGCACGATCTCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAFCSTS*ARSQKP
Trigger: GGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAA...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTTTTTGCAGCACTTCTTaGGCACGATCTCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSFCSTS*ARSQKP
Trigger: GGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAA...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGGATGATGGCTCTCCCGCCCCATTaGGGATTTTGCAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: TYSWSPCLEDRKEAMWMMALPPH*GFCSTS
Trigger: AGAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGC...CATCATCCACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATGCGGATCCTCCTGTTaGACTCCTTGCCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGCGSSC*TPCPRG
Trigger: GCCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCA...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCTCATGGTCCTGGAGATaGGCGGCTTGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: KLKRVSLREKSSSSALQISWSWR*AACCGR
Trigger: ACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGA...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGGATGGTGTAATGTTCTaGGGGTGGCGAATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVDGVMF*GWRMQG
Trigger: CCCCTGCATTCGCCACCCTCAGAACATTACACCATC...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGATGGTGTAATGTTCTaGGGGTGGCGAATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLDGVMF*GWRMQG
Trigger: CCCCTGCATTCGCCACCCTCAGAACATTACACCATC...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCGCTCTCCTAACCCAATaGATATGCACCACATCCACT +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGALLTQ*ICTTST
Trigger: AGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGC...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACACCTCCACGTCCTCGTTaGGCTCCTCCTCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTPPRPR*APPPGS
Trigger: AGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGG...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGTTCACTCTCTCTTGCTaGACTCTGTGTCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMFTLSC*TLCPGF
Trigger: GAACCCTGGACACAGAGTTCAGCAAGAGAGAGTGAA...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS-3UTR TCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVASLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGCCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCATTTGGCTTCTGCCTaGGCCTCTCACGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVHLASA*ASHGSD
Trigger: GTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATG...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTAGCAGCAAGCCATACTaGTCCTCATCCAATATGCCA +
Preference number: 4 (lower is better)
Translates to: QDATQGKCLLGRAVFIASSSKPY*SSSNMP
Trigger: TGGCATATTGGATGAGGATCAGTATGGCTTGCTGCT...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGCAAACACAGCTATCCTaGTGTCATGGAACGAGGTCA +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPQTQLS*CHGTRS
Trigger: TGACCTCGTTCCATGACATCAGGATAGCTGTGTTTG...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCACCTCCTGGCTCCGAATaGACATGGAGCATGGTGTGC +
Preference number: 4 (lower is better)
Translates to: RKVFGFPRSMGHHRSWYSPPGSE*TWSMVC
Trigger: GCACACCATGCTCCATGTTCATTCGGAGCCAGGAGG...TGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGAGCATCCTTCATTCCTaGCAAGAGAAGACCAACGCT +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWSILHS*QEKTNA
Trigger: AGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCT...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTGCTCACCTCCAAAGATaGGTGATTCTGCAGCGCCAG +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCAHLQR*VILQRQ
Trigger: CTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGC...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAAAGAAAGCTCCGCCTaGGTTGCAAGAAGGAAACTC +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPKESSA*VARRKL
Trigger: GAGTTTCCTTCTTGCAACTCAGGCGGAGCTTTCTTT...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACTTGGTTTGGAACTTTaGAAAGGCCTGGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSLGLEL*KGLGTS
Trigger: GGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAG...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCACGTCTTCTGGTTAAATaGGAGGTGTCAGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: QGCPMFYTCRSFLPCRRARLLVK*EVSGSG
Trigger: TCCAGACCCTGACACCTCTCATTTAACCAGAAGACG...TGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS-3UTR GCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATACCCCTCGATCCAACCTaGCTCTGCCTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWIPLDPT*LCLSFI
Trigger: GATGAAGGAGAGGCAGAGGCAGGTTGGATCGAGGGG...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCCCCTCGATCCAACCTaGCTCTGCCTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAPLDPT*LCLSFI
Trigger: GATGAAGGAGAGGCAGAGGCAGGTTGGATCGAGGGG...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGTAAATTTCTGTTCCTaGTCGATGCGGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFVNFCS*SMRLCR
Trigger: CCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTAC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGTAAATTTCTGTTCCTaGTCGATGCGGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWVNFCS*SMRLCR
Trigger: CCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTAC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATACCTTGTCCACGGACTTaGGCACCTGGTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWIPCPRT*APGQTL
Trigger: GAGAGTCTGACCAGGTGCGCAAGTCCGTGGACAAGG...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCGGCTGGCGTCCACATTaGCATCCTGCATTTTACCAT +
Preference number: 4 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFGWRPH*HPAFYH
Trigger: ATGGTAAAATGCAGGATGGCAATGTGGACGCCAGCC...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
CDS-3UTR GCA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCGGCTGGCGTCCACATTaGCATCCTGCATTTTACCAT +
Preference number: 4 (lower is better)
Translates to: SLREKSSSSALQILASLGGWRPH*HPAFYH
Trigger: ATGGTAAAATGCAGGATGGCAATGTGGACGCCAGCC...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
CDS-3UTR GCA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAACCCGCCTTCCCGATCTaGACAGCCAGCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKPAFPI*TASLVS
Trigger: GCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGG...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTCCTGTACCACTGTCATaGGATTGGTGGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCPVPLS*DWWSAC
Trigger: GCACGCTGACCACCAATCGCATGACAGTGGTACAGG...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCCTGTACCACTGTCATaGGATTGGTGGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVPVPLS*DWWSAC
Trigger: GCACGCTGACCACCAATCGCATGACAGTGGTACAGG...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCCTCTGGCATCTGGCTaGGCACGGGCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCPLASG*ARARSP
Trigger: AGGACTACGAGCCCGTGCGCAGCCAGATGCCAGAGG...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTCCCCCTTGCTGTACATaGGGAAGCTCTCGTCGGGCA +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLPPCCT*GSSRRA
Trigger: TGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGG...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTTGTCAATTCGCTCCTaGTCAATCTCCCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFLSIRS*SISPFS
Trigger: CGAGAAGGGGGAGATTGAGCAGGAGCGAATTGACAA...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTTTGTCAATTCGCTCCTaGTCAATCTCCCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTLSIRS*SISPFS
Trigger: CGAGAAGGGGGAGATTGAGCAGGAGCGAATTGACAA...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCATTGTCAATTCGCTCCTaGTCAATCTCCCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIALSIRS*SISPFS
Trigger: CGAGAAGGGGGAGATTGAGCAGGAGCGAATTGACAA...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTCCTTTAACCAGGGTATaGTTGTCCGTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLPLTRV*LSVGEE
Trigger: CTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGG...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTTTCACCCAGAGCATCTaGACGGCCTTCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAFTQSI*TAFRGE
Trigger: CTCCCCTCTGAAGGCCGTGCAGATGCTCTGGGTGAA...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTGGGGTTCCGGAAGATaGCGTCAAAGACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGWGSGR*RQRHCA
Trigger: AGCGCAATGTCTTTGACGGCATCTTCCGGAACCCCA...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGGCTTCCCTCCAAACTaGACGATCACTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWGFPPN*TITIWM
Trigger: CATCCAGATAGTGATCGTGCAGTTTGGAGGGAAGCC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGCTTCCCTCCAAACTaGACGATCACTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHGFPPN*TITIWM
Trigger: CATCCAGATAGTGATCGTGCAGTTTGGAGGGAAGCC...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTATCCACTGGTCCAGCTaGAGTGGAGAGCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLIHWSS*SGEQLN
Trigger: ATTCAGCTGCTCTCCACTGCAGCTGGACCAGTGGAT...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTATCCACTGGTCCAGCTaGAGTGGAGAGCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: EVSVGPSCFYSISATSVLIHWSS*SGEQLN
Trigger: ATTCAGCTGCTCTCCACTGCAGCTGGACCAGTGGAT...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTCTGTGTGAGCCTGCCTaGCTCCTTGAGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGLCEPA*LLEELE
Trigger: CTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAG...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCCTGTGTGAGCCTGCCTaGCTCCTTGAGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCLCEPA*LLEELE
Trigger: CTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAG...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCCTGTGTGAGCCTGCCTaGCTCCTTGAGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCLCEPA*LLEELE
Trigger: CTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAG...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: NIQDATQGKCLLGRAVFIGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCACTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCGGAAACAAGGCAACATaGCGGCAAAGAAACTTTATA +
Preference number: 4 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGGNKAT*RQRNFI
Trigger: TATAAAGTTTCTTTGCCGGCATGTTGCCTTGTTTCC...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTAAAGTCTTCGAGCAGTaGTTTGCAGATCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFKVFEQ*FADPGI
Trigger: GATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTT...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGAAAGTCTTCGAGCAGTaGTTTGCAGATCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMKVFEQ*FADPGI
Trigger: GATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTT...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ATTCTGCAGCGCCAGGAGTCACTGAACGGGCTCCCTGCCCTTCCCTCATCTGTTTCTCTGTACAGACAGTaGCAAAGAGAACCTATTTTT +
Preference number: 4 (lower is better)
Translates to: ILQRQESLNGLPALPSSVSLYRQ*QREPIF
Trigger: AAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGA...AACAGATGAGGGAAGGGCAGGGAGCCCGTTCAGTGACTCCTGGCGCTGCAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCAACCATGTTCCAAGGCTaGCCCATGTTTTACACGTGC +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSTMFQG*PMFYTC
Trigger: GCACGTGTAAAACATGGGGCAGCCTTGGAACATGGT...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTACCATGTTCCAAGGCTaGCCCATGTTTTACACGTGC +
Preference number: 4 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTTMFQG*PMFYTC
Trigger: GCACGTGTAAAACATGGGGCAGCCTTGGAACATGGT...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTGAGGGGGTGCATGTGTaGAAGCATCCTTCATTCCTG +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVEGVHV*KHPSFL
Trigger: CAGGAATGAAGGATGCTTGCACACATGCACCCCCTC...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGCCTAATGGAGTGAACTaGCAAACGTACCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWPNGVN*QTYPML
Trigger: CAGCATGGGGTACGTTTGGCAGTTCACTCCATTAGG...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTCAGTGGGGCCCATGCTaGTCCCTGGAACTGGCATCT +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLQWGPC*SLELAS
Trigger: AGATGCCAGTTCCAGGGAGCAGCATGGGCCCCACTG...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTCATGTCACCCATGTTTaGTGCGGTCCTTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAHVTHV*CGPCSG
Trigger: GCCCGAGCAAGGACCGCAGCAAACATGGGTGACATG...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCATTTCAGAACCACACTaGACGAGTCAGAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLISEPH*TSQKSQ
Trigger: CTGGCTCTTCTGACTCGTGCAGTGTGGTTCTGAAAT...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTTCTCAGAACCAAATCTaGCACTTACTCCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFSQNQI*HLLLEP
Trigger: GGGCTCCAGGAGTAAGTGGCAGATTTGGTTCTGAGA...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp AAAGCTCCGCCTGAGTTGCAAGAAGGAAACTCCTCAGAGCTCTCTCTGCTCACCAAATTGTATGGCTGGTaGCAGATGAGACACCCAAGT +
Preference number: 4 (lower is better)
Translates to: KAPPELQEGNSSELSLLTKLYGW*QMRHPS
Trigger: ACTTGGGTGTCTCATCTGGCACCAGCCATACAATTT...GGTGAGCAGAGAGAGCTCTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp CGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAGGAGGCTTGTCAGAATaGACCAGGTTGGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RKVFGFPRSMGHHRSWYSGGLSE*TRLAAS
Trigger: GGAGGCTGCCAACCTGGTGCATTCTGACAAGCCTCC...TGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTCCGAACTCGCCCCCATaGCTCGACTCATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARPNSPP*LDSFLW
Trigger: CCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTCCGAACTCGCCCCCATaGCTCGACTCATTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGPNSPP*LDSFLW
Trigger: CCAAAGAAATGAGTCGAGCCATGGGGGCGAGTTCGG...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTCACCATATTTGACCTaGGCTATGTCCCCAACCACG +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYSPYLT*AMSPTT
Trigger: CGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGA...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTTTCCTGACAGCAGCATaGGGTCCTTGTCCACGGACT +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVFLTAA*GPCPRT
Trigger: AGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAA...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTTCCTGACAGCAGCATaGGGTCCTTGTCCACGGACT +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCFLTAA*GPCPRT
Trigger: AGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAA...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGAGCCCTCCATCACGTaGGTTCCTGACAGCAGCATG +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAEPSIT*VPDSSM
Trigger: CATGCTGCTGTCAGGAACCCACGTGATGGAGGGCTC...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGGAGAGCTTGGTTTGGAACTTTGAAAAGGCCTGGGGACTTCCTGCTATTGTCTTCTTGTCTGAGCAGATaGCTGTGGCATTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: RRAWFGTLKRPGDFLLLSSCLSR*LWHCPW
Trigger: CCATGGGCAATGCCACAGCCATCTGCTCAGACAAGA...AGACAATAGCAGGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAGCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTGTACAACTTCTCCTCTaGCATCTGGCTGCGCACGGG +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAVQLLL*HLAAHG
Trigger: CCCGTGCGCAGCCAGATGCCAGAGGAGAAGTTGTAC...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGACTTGCGGATGGCTTCTaGGACCTCTGGCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRLADGF*DLWPHR
Trigger: CCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAG...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAAGGTATGCTTGTCCGTTaGGGAGGAGCGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKGMLVR*GGASQH
Trigger: GTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACC...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGGTATGCTTGTCCGTTaGGGAGGAGCGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVGMLVR*GGASQH
Trigger: GTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTACCGTGGGCGGCTCAGTaGCCAGTGCCAGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLPWAAQ*PVPARQ
Trigger: TTGCCTCGCTGGCACTGGCCACTGAGCCGCCCACGG...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGGAGAGCTTGGTTTGGAACTTTGAAAAGGCCTGGGGACTTCCTGCTATTGTCTCTCCCGCTGTCGATCTaGAACATCTTCTCGCCAACA +
Preference number: 4 (lower is better)
Translates to: RRAWFGTLKRPGDFLLLSLPLSI*NIFSPT
Trigger: TGTTGGCGAGAAGATGTTCCAGATCGACAGCGGGAG...AGACAATAGCAGGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAGCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTCTCCCGCTGTCGATCTaGAACATCTTCTCGCCAACA +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVLPLSI*NIFSPT
Trigger: TGTTGGCGAGAAGATGTTCCAGATCGACAGCGGGAG...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGGAGAGCTTGGTTTGGAACTTTGAAAAGGCCTGGGGACTTCCTGCTATTGTCTTGCACGATCACTATCTaGATGGCAAAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RRAWFGTLKRPGDFLLLSCTITI*MAKVPS
Trigger: GCTGGGCACCTTTGCCATCCAGATAGTGATCGTGCA...AGACAATAGCAGGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAGCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGATGCACCACATCCACTaGTCCAGCTGCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSMHHIH*SSCSGE
Trigger: CTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCAT...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTATGGTGGCGATGACCTaGCCCCAAACGAGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAMVAMT*PQTSSP
Trigger: AGGAGAGCTCGTTTGGGGCCAGGTCATCGCCACCAT...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAACGGAACCACAGGATCTaGCCCCGCCGCAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKRNHRI*PRRSSR
Trigger: GCGGGAGCTGCGGCGGGGCCAGATCCTGTGGTTCCG...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGACCCGTAAGCCCCCAGTaGAGATCCCGCCCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRPVSPQ*RSRPLP
Trigger: AGGCAAGGGGCGGGATCTCCACTGGGGGCTTACGGG...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAATTCATGCGGGGGACGTaGTGGCTGGGCGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: STLPQSLYRQCQREPIFEFMRGT*WLGGCM
Trigger: CATGCACCCGCCCAGCCACCACGTCCCCCGCATGAA...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGCAACTCGGTAGCATTTaGCTTCTGCCTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWQLGSI*LLPEPL
Trigger: GAGAGGCTCAGGCAGAAGCCAAATGCTACCGAGTTG...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCACATCCTTGGGCCGGATaGCCGTTAGTGTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: CVQASFIPDKRRPTLMLAHPWAG*PLVLQT
Trigger: GGTTTGCAACACTAACGGCCATCCGGCCCAAGGATG...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATGAGGCGGAAAGTGTTTaGTTTTCCTCGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYEAESV*FSSKHG
Trigger: CCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTC...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTGAGGCGGAAAGTGTTTaGTTTTCCTCGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSEAESV*FSSKHG
Trigger: CCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTC...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGAACCAAATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAATGTGGAAGAGTTCTCTaGGCCTGGAGAAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RTKSATYSWSPCLEDRKECGRVL*AWRREG
Trigger: CCCTTCCCTTCTCCAGGCCCAGAGAACTCTTCCACA...TTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGCTCTTTTCCCGAGTaGCTCTCATCTTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHGSFPE*LSSCLW
Trigger: CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCC...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTGGCTCTTTTCCCGAGTaGCTCTCATCTTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFGSFPE*LSSCLW
Trigger: CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCC...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTAGGCTGGTCACCCCTTTaGTTATGCAGTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLGWSPL*LCSSSP
Trigger: AGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCC...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTGTGGGCTGGCTTTGGTaGCGTTTGTACTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSVGWLW*RLYWNP
Trigger: TGGATTCCAGTACAAACGCCACCAAAGCCAGCCCAC...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGAGGAGAGCAGTGGGCTaGCTTTGGTGGCGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: EEWILQERRKVFGFPRSMRRAVG*LWWRLY
Trigger: GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCT...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTAGGAGAGCAGTGGGCTaGCTTTGGTGGCGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGRRAVG*LWWRLY
Trigger: GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCT...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCACTTGTAGGAGAGCAGTaGGCTGGCTTTGGTGGCGTT +
Preference number: 4 (lower is better)
Translates to: CVQASFIPDKRRPTLMLALVGEQ*AGFGGV
Trigger: AACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAG...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCCTTGTAGGAGAGCAGTaGGCTGGCTTTGGTGGCGTT +
Preference number: 4 (lower is better)
Translates to: FCKRGGKCLVFLEAWDIILVGEQ*AGFGGV
Trigger: AACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAG...GATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGCTTGTAGGAGAGCAGTaGGCTGGCTTTGGTGGCGTT +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSLVGEQ*AGFGGV
Trigger: AACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAG...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCACATGGTCAGGGGTGGTaGCTCTTGGCTATGAAAATC +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAHGQGW*LLAMKI
Trigger: GATTTTCATAGCCAAGAGCCACCACCCCTGACCATG...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR CCA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGGTCATCTCTATGCTATaGTTGGGACAAGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMVISML*LGQGDK
Trigger: CTTGTCCCCTTGTCCCAACCATAGCATAGAGATGAC...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGGCTTCCAACAACTaGAGGACCCAGGACAAGACA +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWVASNN*RTQDKT
Trigger: TGTCTTGTCCTGGGTCCTCCAGTTGTTGGAAGCCAC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTGGTGGCATTTCAGCATaGTTGGGGAAAAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTGGISA*LGKRVA
Trigger: AGCCACTCTTTTCCCCAACCATGCTGAAATGCCACC...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATGGAGAGAGATTTGGGTaGGAGGCTTGTCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYGERFG*EACQNA
Trigger: TGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCC...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCCCCTCCTCCCCCACCTaGGTTGGTATGATCTCTACA +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCPSSPT*VGMIST
Trigger: TGTAGAGATCATACCAACCCAGGTGGGGGAGGAGGG...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CAA 72 bp ACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: TLVFSPVFGFRL*LVAAWVSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CAA 72 bp AGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTaGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGA +
Preference number: 4 (lower is better)
Translates to: SHREEGQHEEWI*QERRKVFGFPR
Trigger: TCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTCATGCTGACCCTCCTCACGATGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CAA 72 bp AGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTaGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RDTSSRHSGDAL*KVLLPGGFCQV
Trigger: CACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAAGACCACACAGATAACTaGGAGGAGAATGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKDHTDN*EENGGP
Trigger: GGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTC...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAGGTCATTGCCCTGGATaGAGAGGCCGTCGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRGHCPG*RGRRQG
Trigger: TCCCTGCCGACGGCCTCTTCATCCAGGGCAATGACC...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAACACCAACATCCGTCCTaGGCCCTCCATCACGTGGGT +
Preference number: 4 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKHQHPS*ALHHVG
Trigger: ACCCACGTGATGGAGGGCTCAGGACGGATGTTGGTG...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGCCTGCATTTTACCATTaGCTAGGCTGGCATTCGCAC +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWPAFYH*LGWHSH
Trigger: GTGCGAATGCCAGCCTAGTCAATGGTAAAATGCAGG...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR TCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGCCACGGCTTCTTGTTaGCCACGAAGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVATASC*PRRCPQ
Trigger: CTGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTTTGCAGCACTTCTTaGGCACGATCTCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGFCSTS*ARSQKP
Trigger: GGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAA...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGTTTTGCAGCACTTCTTaGGCACGATCTCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ICHLLLEPLSRGQKRSYVFCSTS*ARSQKP
Trigger: GGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAA...CACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGATGGTGTAATGTTCTaGGGGTGGCGAATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVADGVMF*GWRMQG
Trigger: CCCCTGCATTCGCCACCCTCAGAACATTACACCATC...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTGCTCTCCTAACCCAATaGATATGCACCACATCCACT +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSALLTQ*ICTTST
Trigger: AGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGC...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTCGCTGTTGTTCTTGTTaGGGGATGACGGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSRCCSC*GMTAGS
Trigger: CGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCG...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGSLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: SLREKSSSSALQILASLGSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAATCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: FSRVALILFVEEFSGPGESRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: VSVVRLIPLSMALLFLLRINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...CCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR TCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAACCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCTCAAGCGAGTTTCATTaGGAGAAAAGTCTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAASSEFH*EKSLRA
Trigger: TGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGA...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAAGCAGCAAGCCATACTaGTCCTCATCCAATATGCCA +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIASSKPY*SSSNMP
Trigger: TGGCATATTGGATGAGGATCAGTATGGCTTGCTGCT...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTACCTTTTCTCACCTGTaGTACTGTAGGGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMATFSHL*YCRVSE
Trigger: TTCTGAAACCCTACAGTATCACAGGTGAGAAAAGGT...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGTCACGGACACATGACTaGTCAAAGAAGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMSRTHD*SKKWGD
Trigger: ATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGA...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGTCACGGACACATGACTaGTCAAAGAAGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMSRTHD*SKKWGD
Trigger: ATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGA...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAAAGCATCCTTCATTCCTaGCAAGAGAAGACCAACGCT +
Preference number: 4 (lower is better)
Translates to: FSRVALILFVEEFSGPGESILHS*QEKTNA
Trigger: AGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCT...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACAGCATCCTTCATTCCTaGCAAGAGAAGACCAACGCT +
Preference number: 4 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHSILHS*QEKTNA
Trigger: AGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCT...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAACTTTATGTACTACAGTaGGTTTTGACAAACCAACCA +
Preference number: 4 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQLYVLQ*VLTNQP
Trigger: TGGTTGGTTTGTCAAAACTCACTGTAGTACATAAAG...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCAAGAAGCTATGTGGATaGTGCAGTCCCAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSKKLCG*CSPKVE
Trigger: TTCTACTTTGGGACTGCATCATCCACATAGCTTCTT...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAAGCGCCAGGAGTCACTaGACGGGCTCCCTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKSARSH*TGSLPF
Trigger: GAAGGGCAGGGAGCCCGTTCAGTGACTCCTGGCGCT...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATACCTCCAAAGATGAGTaGTTCTGCAGCGCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNTSKDE*FCSARS
Trigger: ACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGT...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGTAAAAGAAGAGTaGAGGGACTCATCCCACCAC +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGFVKEE*RDSSHH
Trigger: GTGGTGGGATGAGTCCCTTCACTCTTCTTTTACAAA...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTTGCTCGATGCGGCTCTaGAGGCCCCGGAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSCSMRL*RPRNCF
Trigger: GAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCA...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTGTAAATTTCTGTTCCTaGTCGATGCGGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: EVSVGPSCFYSISATSVLVNFCS*SMRLCR
Trigger: CCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTAC...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTGTAAATTTCTGTTCCTaGTCGATGCGGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVVNFCS*SMRLCR
Trigger: CCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTAC...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCACCTGTTGTTTGGCTTTaGTCTGGCTGGCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: CVQASFIPDKRRPTLMLAPVVWL*SGWRPH
Trigger: ATGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGG...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAACCCGCCTTCCCGATCTaGACAGCCAGCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: STLPQSLYRQCQREPIFEPAFPI*TASLVS
Trigger: GCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGG...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AGAAGAGTGAAGGGACTCATCCCACCACATAATAAGACATTAGAAATTGACAATGCACGTAGACGGGCGTaGACTCAGGCAGCCACGGCT +
Preference number: 4 (lower is better)
Translates to: RRVKGLIPPHNKTLEIDNARRRA*TQAATA
Trigger: AGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGC...ATTGTCAATTTCTAATGTCTTATTATGTGGTGGGATGAGTCCCTTCACTCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGAGCACGTAGACGGGCGTaGACTCAGGCAGCCACGGCT +
Preference number: 4 (lower is better)
Translates to: VFIASQPPVFLNHTNSQRARRRA*TQAATA
Trigger: AGCCGTGGCTGCCTGAGTGCACGCCCGTCTACGTGC...TCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TTTAAACCACAAACATTTCAGAACCACACTGCACGAGTCAGAAGAGCCAGCGATCCTGTACCACTGTCATaGGATTGGTGGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: FKPQTFQNHTARVRRASDPVPLS*DWWSAC
Trigger: GCACGCTGACCACCAATCGCATGACAGTGGTACAGG...ATCGCTGGCTCTTCTGACTCGTGCAGTGTGGTTCTGAAATGTTTGTGGTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGACCTCTGGCATCTGGCTaGGCACGGGCTCGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRPLASG*ARARSP
Trigger: AGGACTACGAGCCCGTGCGCAGCCAGATGCCAGAGG...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCTCAGAAGCCCCCTTaGTGTACATGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCSQKPP*CTCGSS
Trigger: AGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGA...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTCTCAGAAGCCCCCTTaGTGTACATGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCSQKPP*CTCGSS
Trigger: AGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGA...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTCTCAGAAGCCCCCTTaGTGTACATGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCSQKPP*CTCGSS
Trigger: AGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGA...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAGTCACGGCCACCACCTaGCGCTGCTCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRVTATT*RCSVCV
Trigger: CACACACACTGAGCAGCGGCAGGTGGTGGCCGTGAC...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCTTCACCCAGAGCATCTaGACGGCCTTCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: KLKRVSLREKSSSSALQIFTQSI*TAFRGE
Trigger: CTCCCCTCTGAAGGCCGTGCAGATGCTCTGGGTGAA...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATGGGGTTCCGGAAGATaGCGTCAAAGACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: CVQASFIPDKRRPTLMLAWGSGR*RQRHCA
Trigger: AGCGCAATGTCTTTGACGGCATCTTCCGGAACCCCA...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTGGGGTTCCGGAAGATaGCGTCAAAGACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCWGSGR*RQRHCA
Trigger: AGCGCAATGTCTTTGACGGCATCTTCCGGAACCCCA...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGGGGTTCCGGAAGATaGCGTCAAAGACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCWGSGR*RQRHCA
Trigger: AGCGCAATGTCTTTGACGGCATCTTCCGGAACCCCA...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGGGCTTCCCTCCAAACTaGACGATCACTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSGFPPN*TITIWM
Trigger: CATCCAGATAGTGATCGTGCAGTTTGGAGGGAAGCC...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCATCCACTGGTCCAGCTaGAGTGGAGAGCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCIHWSS*SGEQLN
Trigger: ATTCAGCTGCTCTCCACTGCAGCTGGACCAGTGGAT...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGAGCCTGGATGGATGGGTaGCCGGAAAGCGGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VFIASQPPVFLNHTNSQRAWMDG*PESGWQ
Trigger: CTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGC...TCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGGGAAACAAGGCAACATaGCGGCAAAGAAACTTTATA +
Preference number: 4 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWGNKAT*RQRNFI
Trigger: TATAAAGTTTCTTTGCCGGCATGTTGCCTTGTTTCC...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TTTTGGACACAATGGCAGGAGAGAGATTTGGGTGGGAGGCTTGTCAGAATGCACAAAGTCTTCGAGCAGTaGTTTGCAGATCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: FWTQWQERDLGGRLVRMHKVFEQ*FADPGI
Trigger: GATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTT...GTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTGATCCTCATCCAATATaGCAACAGCTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFDPHPI*QQLRCC
Trigger: GCAGCATCTGAGCTGTTGGCATATTGGATGAGGATC...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCGATCCTCATCCAATATaGCAACAGCTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: SLREKSSSSALQILASLGDPHPI*QQLRCC
Trigger: GCAGCATCTGAGCTGTTGGCATATTGGATGAGGATC...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATCTGAGACCCACAAAGTaGTTAGCAGTTAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYLRPTK*LAVKRL
Trigger: CAGCCTCTTAACTGCTAAGCACTTTGTGGGTCTCAG...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGCTGAGACCCACAAAGTaGTTAGCAGTTAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWLRPTK*LAVKRL
Trigger: CAGCCTCTTAACTGCTAAGCACTTTGTGGGTCTCAG...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACTGAGACCCACAAAGTaGTTAGCAGTTAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSLRPTK*LAVKRL
Trigger: CAGCCTCTTAACTGCTAAGCACTTTGTGGGTCTCAG...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTCACCCCTTTGGTTATaGAGTTCCTCTCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWSPLWL*SSSPGY
Trigger: GTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGA...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGTGAGAGTGAGGGGGTaGATGTGTGCAAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: FCKRGGKCLVFLEAWDIIVRVRG*MCASIL
Trigger: AAGGATGCTTGCACACATGCACCCCCTCACTCTCAC...GATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTCCTAATGGAGTGAACTaGCAAACGTACCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: EVSVGPSCFYSISATSVLPNGVN*QTYPML
Trigger: CAGCATGGGGTACGTTTGGCAGTTCACTCCATTAGG...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTCCTAATGGAGTGAACTaGCAAACGTACCCCATGCTG +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGPNGVN*QTYPML
Trigger: CAGCATGGGGTACGTTTGGCAGTTCACTCCATTAGG...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCAATCACCACCAATCCTaGACGGTTTCCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: KLKRVSLREKSSSSALQINHHQS*TVSRRA
Trigger: TGCCCGCCGGGAAACCGTGCAGGATTGGTGGTGATT...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR GCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGACATGTCACCCATGTTTaGTGCGGTCCTTGCTCGGGC +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGHVTHV*CGPCSG
Trigger: GCCCGAGCAAGGACCGCAGCAAACATGGGTGACATG...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTCTCTTGTCATCTCTATaGTATGGTTGGGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTLLSSL*YGWDKG
Trigger: CCCCTTGTCCCAACCATAGCATAGAGATGACAAGAG...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCACCATATTTGACCTaGGCTATGTCCCCAACCACG +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVSPYLT*AMSPTT
Trigger: CGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGA...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTTTCCTGACAGCAGCATaGGGTCCTTGTCCACGGACT +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAFLTAA*GPCPRT
Trigger: AGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAA...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTTGTTTGGCTTTGCTCTaGCTGGCGTCCACATTGCCA +
Preference number: 4 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLCLALL*LASTLP
Trigger: TGGCAATGTGGACGCCAGCCAGAGCAAAGCCAAACA...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACTTGCGGATGGCTTCTaGGACCTCTGGCCGCACCGG +
Preference number: 4 (lower is better)
Translates to: VFIASQPPVFLNHTNSQRLADGF*DLWPHR
Trigger: CCGGTGCGGCCAGAGGTCCCAGAAGCCATCCGCAAG...TCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTGTGATGCCTGCCCGCTaGCACTTGCGGATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSVMPAR*HLRMAS
Trigger: AGAAGCCATCCGCAAGTGCCAGCGGGCAGGCATCAC...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAATGCCTGCGATGCCCATaGCGAAGCCCACGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKCLRCP*RSPRRP
Trigger: AGGCCGACGTGGGCTTCGCCATGGGCATCGCAGGCA...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACACCGTGGGCGGCTCAGTaGCCAGTGCCAGCGAGGCAA +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTPWAAQ*PVPARQ
Trigger: TTGCCTCGCTGGCACTGGCCACTGAGCCGCCCACGG...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCCTCCCGCTGTCGATCTaGAACATCTTCTCGCCAACA +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCLPLSI*NIFSPT
Trigger: TGTTGGCGAGAAGATGTTCCAGATCGACAGCGGGAG...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTCTCCCGCTGTCGATCTaGAACATCTTCTCGCCAACA +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVLPLSI*NIFSPT
Trigger: TGTTGGCGAGAAGATGTTCCAGATCGACAGCGGGAG...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTCGATCACTATCTGGATaGCAAAGGTGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVRSLSG*QRCPAR
Trigger: TCGTGCTGGGCACCTTTGCCATCCAGATAGTGATCG...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTCGATCACTATCTGGATaGCAAAGGTGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCRSLSG*QRCPAR
Trigger: TCGTGCTGGGCACCTTTGCCATCCAGATAGTGATCG...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGTGCACGATCACTATCTaGATGGCAAAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: EEWILQERRKVFGFPRSMCTITI*MAKVPS
Trigger: GCTGGGCACCTTTGCCATCCAGATAGTGATCGTGCA...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTTGCACGATCACTATCTaGATGGCAAAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGCTITI*MAKVPS
Trigger: GCTGGGCACCTTTGCCATCCAGATAGTGATCGTGCA...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATTGCACGATCACTATCTaGATGGCAAAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHCTITI*MAKVPS
Trigger: GCTGGGCACCTTTGCCATCCAGATAGTGATCGTGCA...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCACGATCACTATCTaGATGGCAAAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCCTITI*MAKVPS
Trigger: GCTGGGCACCTTTGCCATCCAGATAGTGATCGTGCA...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAGATTGGCTACATCCTaGCTCTGGCTGGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWIRLATS*LWLVTE
Trigger: CTCGGTCACCAGCCAGAGCCAGGATGTAGCCAATCT...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVARGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCTCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 4 (lower is better)
Translates to: FCKRGGKCLVFLEAWDIISMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...GATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCSMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGTCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVSPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCATTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RKVFGFPRSMGHHRSWYSLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...TGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTAGGCTGGGCGGGTGCATaGCTGGTCCATGTCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLGWAGA*LVHVWV
Trigger: CACCCAGACATGGACCAGCCATGCACCCGCCCAGCC...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAATGCGGGGGACGTGGTaGCTGGGCGGGTGCATGGCT +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTMRGTW*LGGCMA
Trigger: AGCCATGCACCCGCCCAGCCACCACGTCCCCCGCAT...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCACACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: ALQILASLGRMAVSVANPHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCAACTCGGTAGCATTTaGCTTCTGCCTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVQLGSI*LLPEPL
Trigger: GAGAGGCTCAGGCAGAAGCCAAATGCTACCGAGTTG...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTTTAAACCCCTCAGGATaGCAACTCGGTAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSLNPSG*QLGSIW
Trigger: CCAAATGCTACCGAGTTGCCATCCTGAGGGGTTTAA...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCATTAAACCCCTCAGGATaGCAACTCGGTAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSLNPSG*QLGSIW
Trigger: CCAAATGCTACCGAGTTGCCATCCTGAGGGGTTTAA...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGTGCTTTGCAGATCCTaGCATCCTTGGGCCGGATGG +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLVLCRS*HPWAGW
Trigger: CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCAC...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGAATGGCTTTCTGTTTaGGAAAGCAAGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPEWLSV*ESKTCC
Trigger: ACAGCAAGTCTTGCTTTCCCAAACAGAAAGCCATTC...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGGAATGGCTTTCTGTTTaGGAAAGCAAGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWEWLSV*ESKTCC
Trigger: ACAGCAAGTCTTGCTTTCCCAAACAGAAAGCCATTC...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAGTTTTCCTCGAAGCATaGGACATCATCGATCATGGT +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREVFLEA*DIIDHG
Trigger: ACCATGATCGATGATGTCCCATGCTTCGAGGAAAAC...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCGTTTTCCTCGAAGCATaGGACATCATCGATCATGGT +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGVFLEA*DIIDHG
Trigger: ACCATGATCGATGATGTCCCATGCTTCGAGGAAAAC...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGAGGCGGAAAGTGTTTaGTTTTCCTCGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWEAESV*FSSKHG
Trigger: CCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGGTCAGCATGAGGAATaGATTTTGCAAGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWGQHEE*ILQERR
Trigger: CCGCCTCTCTTGCAAAATCCATTCCTCATGCTGACC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGAGGATTTTGCCAGGTaGGATGGGCTGACTTTGAAC +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWEDFAR*DGLTLN
Trigger: GTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGTGGTGGCGTTTGTACTaGAATCCAATAAGCACATCT +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWWWRLY*NPISTS
Trigger: AGATGTGCTTATTGGATTCCAGTACAAACGCCACCA...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATCCAGGATGCAACCCAGGGTGGGCTGGCTTTGGTaGCGTTTGTACTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: SRQKSEHGYHKTSRMQPRVGWLW*RLYWNP
Trigger: TGGATTCCAGTACAAACGCCACCAAAGCCAGCCCAC...CCTGGGTTGCATCCTGGATGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTGGGCTGGCTTTGGTaGCGTTTGTACTGGAATCCA +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLVGWLW*RLYWNP
Trigger: TGGATTCCAGTACAAACGCCACCAAAGCCAGCCCAC...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATCCAGGATGCAACCCAGGGCAGTGGGCTGGCTTTaGTGGCGTTTGTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: SRQKSEHGYHKTSRMQPRAVGWL*WRLYWN
Trigger: ATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGC...CCTGGGTTGCATCCTGGATGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTGCTATCCTGATGTCATaGAACGAGGTCACGGACACA +
Preference number: 4 (lower is better)
Translates to: EVSVGPSCFYSISATSVLAILMS*NEVTDT
Trigger: TGTGTCCGTGACCTCGTTCCATGACATCAGGATAGC...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCACTGAGAACCCCTCCTaGCTCCGAATGAACATGGAG +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCTENPS*LRMNME
Trigger: CTCCATGTTCATTCGGAGCCAGGAGGGGTTCTCAGT...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATCCAGGATGCAACCCAGGACTGAGAACCCCTCCTaGCTCCGAATGAACATGGAG +
Preference number: 4 (lower is better)
Translates to: SRQKSEHGYHKTSRMQPRTENPS*LRMNME
Trigger: CTCCATGTTCATTCGGAGCCAGGAGGGGTTCTCAGT...CCTGGGTTGCATCCTGGATGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATCCAGGATGCAACCCAGGGAACTGGCATCTACATaGTCAGGGGTGGTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: SRQKSEHGYHKTSRMQPRELAST*SGVVAL
Trigger: AAGAGCCACCACCCCTGACCATGTAGATGCCAGTTC...CCTGGGTTGCATCCTGGATGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTACTCACTGGTCAGCTGTaGCACCAGGCGGCCGACTCC +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLLTGQL*HQAADS
Trigger: GGAGTCGGCCGCCTGGTGCCACAGCTGACCAGTGAG...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAACCCAAGGGTCAGCGCTaGACAAGAGGCTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKPKGQR*TRGCRV
Trigger: CACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGG...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCTCTGCCACTTACTCCTaGAGCCCTTGTCTAGAGGAC +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLSATYS*SPCLED
Trigger: GTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGA...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGTCTCTATGCTATGGTTaGGACAAGGGGACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVSLCYG*DKGTRG
Trigger: GCCCCTTGTCCCCTTGTCCCAACCATAGCATAGAGA...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTTCTCTATGCTATGGTTaGGACAAGGGGACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLSLCYG*DKGTRG
Trigger: GCCCCTTGTCCCCTTGTCCCAACCATAGCATAGAGA...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTCTCTATGCTATGGTTaGGACAAGGGGACAAGGGGC +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCSLCYG*DKGTRG
Trigger: GCCCCTTGTCCCCTTGTCCCAACCATAGCATAGAGA...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGGTCATCTCTATGCTATaGTTGGGACAAGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMVISML*LGQGDK
Trigger: CTTGTCCCCTTGTCCCAACCATAGCATAGAGATGAC...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGCATTTCAGCATGGTTaGGGAAAAGAGTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: QGCPMFYTCRSFLPCRRAAFQHG*GKEWLP
Trigger: TGGAAGCCACTCTTTTCCCCAACCATGCTGAAATGC...TGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGCAGGGGGTGGAGGACTaGGCACAATTTAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPQGVED*AQFKVY
Trigger: ATAAACTTTAAATTGTGCCCAGTCCTCCACCCCCTG...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGGAATGGGACAGGGGGTaGAGGACTGGGCACAATTTA +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVEWDRG*RTGHNL
Trigger: TAAATTGTGCCCAGTCCTCCACCCCCTGTCCCATTC...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp AGAACCAAATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGAATGGGACAGGGGGTaGAGGACTGGGCACAATTTA +
Preference number: 4 (lower is better)
Translates to: RTKSATYSWSPCLEDRKEEWDRG*RTGHNL
Trigger: TAAATTGTGCCCAGTCCTCCACCCCCTGTCCCATTC...TTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTAGAAGTGCAGACAACTaGGCCACACATTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTRSADN*ATHSFP
Trigger: TGGGAAAGAATGTGTGGCCCAGTTGTCTGCACTTCT...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGCTAATGGTGGGATTTTaGACACAATGGCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVLMVGF*TQWQER
Trigger: TCTCTCCTGCCATTGTGTCCAAAATCCCACCATTAG...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTAACTTTGAAAAGGCCTaGGGACTTCCTGCTATTGTC +
Preference number: 4 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTNFEKA*GLPAIV
Trigger: GACAATAGCAGGAAGTCCCCAGGCCTTTTCAAAGTT...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACCAGGAGAGCTTGGTTTaGAACTTTGAAAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHQESLV*NFEKAW
Trigger: CCAGGCCTTTTCAAAGTTCCAAACCAAGCTCTCCTG...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCAGGAGAGCTTGGTTTaGAACTTTGAAAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFQESLV*NFEKAW
Trigger: CCAGGCCTTTTCAAAGTTCCAAACCAAGCTCTCCTG...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTCTCCCCCACCTGGGTTaGTATGATCTCTACATTAAA +
Preference number: 4 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTLPHLG*YDLYIK
Trigger: TTTAATGTAGAGATCATACCAACCCAGGTGGGGGAG...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCCTCCCCCACCTGGGTTaGTATGATCTCTACATTAAA +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSILPHLG*YDLYIK
Trigger: TTTAATGTAGAGATCATACCAACCCAGGTGGGGGAG...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CAA 72 bp GAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCT +
Preference number: 4 (lower is better)
Translates to: ETLVFSPVFGFR*LLVAAWVSWVP
Trigger: AGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
3UTR CAA 72 bp TCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTaGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: SFIPDKRRPTLM*AFFHRSLFPKP
Trigger: TGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACACATCACGTGGGTTCCTaGCAGCAGCATGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTHHVGS*QQHGVL
Trigger: AAGGACCCCATGCTGCTGTCAGGAACCCACGTGATG...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAGCACAGCCAGCTTGGTaGGCTTGCCCTGCAGCACGG +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTAQPAW*ACPAAR
Trigger: CCGTGCTGCAGGGCAAGCTCACCAAGCTGGCTGTGC...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAAGGCCAACGAGATGGTaGCGGCCAGAGGGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLRPTRW*RPEGAP
Trigger: AGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCT...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGTTTTGCAGCACTTCTTaGGCACGATCTCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVFCSTS*ARSQKP
Trigger: GGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAA...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTTTGCAGCACTTCTTaGGCACGATCTCAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSFCSTS*ARSQKP
Trigger: GGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAA...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGCTCTCCCGCCCCATTaGGGATTTTGCAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVALPPH*GFCSTS
Trigger: AGAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGATCATGGTCCTGGAGATaGGCGGCTTGTTGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRSWSWR*AACCGR
Trigger: ACGGCCGCAACAAGCCGCTCATCTCCAGGACCATGA...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAAGCAGTGGAGAGCAGCTaGATGGCTTCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKAVESS*MASLQT
Trigger: AGTTTGGAGGGAAGCCATTCAGCTGCTCTCCACTGC...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTGCTCTCCTAACCCAATaGATATGCACCACATCCACT +
Preference number: 4 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLALLTQ*ICTTST
Trigger: AGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGC...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGCTCTCCTAACCCAATaGATATGCACCACATCCACT +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGALLTQ*ICTTST
Trigger: AGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGC...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAACCTCCACGTCCTCGTTaGGCTCCTCCTCCGGGATCT +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKPPRPR*APPPGS
Trigger: AGATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGG...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SNSIAARERVCGWKRWFSIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 4 (lower is better)
Translates to: SLREKSSSSALQILASLGIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACAGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAATGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 4 (lower is better)
Translates to: STLPQSLYRQCQREPIFECRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTCGTTGCTGCTTGGGTaGGTTGGGTGCCTGGATGGA +
Preference number: 4 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVSLLLG*VGCLDG
Trigger: TCCATCCAGGCACCCAACTCACCCAAGCAGCAACGA...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCACCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 4 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGCCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCACCTTTTCTCACCTGTaGTACTGTAGGGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGTFSHL*YCRVSE
Trigger: TTCTGAAACCCTACAGTATCACAGGTGAGAAAAGGT...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCACCTTTTCTCACCTGTaGTACTGTAGGGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLTFSHL*YCRVSE
Trigger: TTCTGAAACCCTACAGTATCACAGGTGAGAAAAGGT...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAACAGGTGATGCGCTCTTaGAGGTCCTCCTTCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKQVMRS*RSSFQE
Trigger: CTCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTG...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTTCCAATAAGCACATCTaGGGGCTGGTCACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVASNKHI*GLVTPL
Trigger: CAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGA...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCATCCAATAAGCACATCTaGGGGCTGGTCACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: RKVFGFPRSMGHHRSWYSSNKHI*GLVTPL
Trigger: CAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGA...TGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGATCACGGACACATGACTaGTCAAAGAAGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGSRTHD*SKKWGD
Trigger: ATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGA...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGACAAACACAGCTATCCTaGTGTCATGGAACGAGGTCA +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGQTQLS*CHGTRS
Trigger: TGACCTCGTTCCATGACATCAGGATAGCTGTGTTTG...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACAAGAGGCTGCCGGGTaGTGGCTGCTTGTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: VFIASQPPVFLNHTNSQRQEAAG*WLLVAV
Trigger: GACAGCCACAAGCAGCCATCACCCGGCAGCCTCTTG...TCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR TCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTAAGAAGCTATGTGGATaGTGCAGTCCCAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFKKLCG*CSPKVE
Trigger: TTCTACTTTGGGACTGCATCATCCACATAGCTTCTT...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAAGTTAGCAAAGTGTGGTaGCCCCCGAGAGGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKVSKVW*PPRGKV
Trigger: GACCTTTCCTCTCGGGGGTCACCACACTTTGCTAAC...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTATCGCACATCCTTCGTTaGCCTCGCCGGGCGGGTGGT +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLSHILR*PRRAGG
Trigger: ACCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGA...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCCCCCTCGATCCAACCTaGCTCTGCCTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVPLDPT*LCLSFI
Trigger: GATGAAGGAGAGGCAGAGGCAGGTTGGATCGAGGGG...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR GCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGTAAATTTCTGTTCCTaGTCGATGCGGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGVNFCS*SMRLCR
Trigger: CCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTAC...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGGATGATGGTAAATTTCTGTTCCTaGTCGATGCGGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TYSWSPCLEDRKEAMWMMVNFCS*SMRLCR
Trigger: CCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTAC...CATCATCCACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTCCACATTGCCATCCTaGATTTTACCATTGACTAGG +
Preference number: 4 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYSTLPS*ILPLTR
Trigger: CCTAGTCAATGGTAAAATGCAGGATGGCAATGTGGA...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
CDS-3UTR GCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGGGCTGGCGTCCACATTaGCATCCTGCATTTTACCAT +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSGWRPH*HPAFYH
Trigger: ATGGTAAAATGCAGGATGGCAATGTGGACGCCAGCC...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR GCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAACCCGCCTTCCCGATCTaGACAGCCAGCTTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKPAFPI*TASLVS
Trigger: GCTCACCAAGCTGGCTGTGCAGATCGGGAAGGCGGG...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGTTGTCAATTCGCTCCTaGTCAATCTCCCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: EEWILQERRKVFGFPRSMLSIRS*SISPFS
Trigger: CGAGAAGGGGGAGATTGAGCAGGAGCGAATTGACAA...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAGGCCACGTCAGTGCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTGHVSA*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCC...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAGGCCACGTCAGTGCCTaGGATGCCCATGGCGAAGCC +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTGHVSA*DAHGEA
Trigger: GGCTTCGCCATGGGCATCGCAGGCACTGACGTGGCC...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTTTCACCCAGAGCATCTaGACGGCCTTCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSFTQSI*TAFRGE
Trigger: CTCCCCTCTGAAGGCCGTGCAGATGCTCTGGGTGAA...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGTTCACCCAGAGCATCTaGACGGCCTTCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQFTQSI*TAFRGE
Trigger: CTCCCCTCTGAAGGCCGTGCAGATGCTCTGGGTGAA...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGGCTTCCCTCCAAACTaGACGATCACTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVGFPPN*TITIWM
Trigger: CATCCAGATAGTGATCGTGCAGTTTGGAGGGAAGCC...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGGGCTTCCCTCCAAACTaGACGATCACTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSGFPPN*TITIWM
Trigger: CATCCAGATAGTGATCGTGCAGTTTGGAGGGAAGCC...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGTGTGAGCCTGCCTaGCTCCTTGAGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: KLKRVSLREKSSSSALQILCEPA*LLEELE
Trigger: CTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAG...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWIIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGAGGCGGCACCATTCCCTCGCTACTCTATTATAAAATATGTGCACACAAGAGTGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: GGGTIPSLLYYKICAHKSGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...ACTCTTGTGTGCACATATTTTATAATAGAGTAGCGAGGGAATGGTGCCGCCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCAGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: CVQASFIPDKRRPTLMLAGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMARKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTCTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTCTGAGACCCACAAAGTaGTTAGCAGTTAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGLRPTK*LAVKRL
Trigger: CAGCCTCTTAACTGCTAAGCACTTTGTGGGTCTCAG...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAACCCATGTTTTACACGTaGAGATCTTTCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREPMFYT*RSFLPC
Trigger: ACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGG...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGACCCATGTTTTACACGTaGAGATCTTTCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGPMFYT*RSFLPC
Trigger: ACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGG...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTACCATGTTCCAAGGCTaGCCCATGTTTTACACGTGC +
Preference number: 4 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLTMFQG*PMFYTC
Trigger: GCACGTGTAAAACATGGGGCAGCCTTGGAACATGGT...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTAAGCTCCGCCTGAGTTaGAAGAAGGAAACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVKLRLS*KKETPQ
Trigger: CTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTT...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCCTCTCAAGATCAGGATaGCCTTTTTGTCCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGLSRSG*PFCPSL
Trigger: TAAAGAGGGACAAAAAGGGCATCCTGATCTTGAGAG...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCCATTTCTTTGGTTTTTaGAGTAAAAGTCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSHFFGF*SKSRCW
Trigger: CCAACAGCGACTTTTACTCCAAAAACCAAAGAAATG...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACATCAGCCACAGGGATCTaGACCACCTGGCCAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTSATGI*TTWPAR
Trigger: CCGGGCTGGCCAGGTGGTCCAGATCCCTGTGGCTGA...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000643662.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTTCACCATATTTGACCTaGGCTATGTCCCCAACCACG +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGSPYLT*AMSPTT
Trigger: CGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGA...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCTCACCATATTTGACCTaGGCTATGTCCCCAACCACG +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLSPYLT*AMSPTT
Trigger: CGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGA...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTGTACAACTTCTCCTCTaGCATCTGGCTGCGCACGGG +
Preference number: 4 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCVQLLL*HLAAHG
Trigger: CCCGTGCGCAGCCAGATGCCAGAGGAGAAGTTGTAC...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTACGTTGACGGTGAGCTaGAACTGCAAGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: EVSVGPSCFYSISATSVLTLTVS*NCKNLE
Trigger: CTCCAAATTCTTGCAGTTCCAGCTCACCGTCAACGT...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCTCCCGCTGTCGATCTaGAACATCTTCTCGCCAACA +
Preference number: 4 (lower is better)
Translates to: QASFIPDKRRPTLMLAFFLPLSI*NIFSPT
Trigger: TGTTGGCGAGAAGATGTTCCAGATCGACAGCGGGAG...GAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATACTCCCGCTGTCGATCTaGAACATCTTCTCGCCAACA +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWILPLSI*NIFSPT
Trigger: TGTTGGCGAGAAGATGTTCCAGATCGACAGCGGGAG...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGAATGCACCACATCCACTaGTCCAGCTGCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGMHHIH*SSCSGE
Trigger: CTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCAT...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTATGCACCACATCCACTaGTCCAGCTGCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLMHHIH*SSCSGE
Trigger: CTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCAT...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTACTTCAATCTGTGTCTaGATCCGATTCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLTSICV*IRFRPR
Trigger: CCGAGGCCTGAATCGGATCCAGACACAGATTGAAGT...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGAAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: STLPQSLYRQCQREPIFESWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSICGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: QDATQGKCLLGRAVFIASCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTTAAACCACAAACATTTCAGAACCACACTGCACGAGTCAGAAGAGCCAGCGATAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: FKPQTFQNHTARVRRASDRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...ATCGCTGGCTCTTCTGACTCGTGCAGTGTGGTTCTGAAATGTTTGTGGTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGTTAAACCCCTCAGGATaGCAACTCGGTAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWLNPSG*QLGSIW
Trigger: CCAAATGCTACCGAGTTGCCATCCTGAGGGGTTTAA...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACAAGATCCTGGCATCCTTaGGCCGGATGGCCGTTAGTG +
Preference number: 4 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTRSWHP*AGWPLV
Trigger: CACTAACGGCCATCCGGCCCAAGGATGCCAGGATCT...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCTGTAGGGTTTCAGAATaGCTTTCTGTTTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLCRVSE*LSVWES
Trigger: GCTTTCCCAAACAGAAAGCCATTCTGAAACCCTACA...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGGACATCATCGATCATaGTATTCAAAATGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: EKSSSSALQILASLGRMAGHHRS*YSKCLL
Trigger: CAAAAGACATTTTGAATACCATGATCGATGATGTCC...GGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGTTTTCCTCGAAGCATaGGACATCATCGATCATGGT +
Preference number: 4 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHVFLEA*DIIDHG
Trigger: ACCATGATCGATGATGTCCCATGCTTCGAGGAAAAC...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGAACCAAATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGAGGCGGAAAGTGTTTaGTTTTCCTCGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: RTKSATYSWSPCLEDRKEEAESV*FSSKHG
Trigger: CCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTC...TTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGGGTCAGCATGAGGAATaGATTTTGCAAGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLGQHEE*ILQERR
Trigger: CCGCCTCTCTTGCAAAATCCATTCCTCATGCTGACC...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGGATGATGGGTCAGCATGAGGAATaGATTTTGCAAGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: TYSWSPCLEDRKEAMWMMGQHEE*ILQERR
Trigger: CCGCCTCTCTTGCAAAATCCATTCCTCATGCTGACC...CATCATCCACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGCTCTTTTCCCGAGTaGCTCTCATCTTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: EEWILQERRKVFGFPRSMGSFPE*LSSCLW
Trigger: CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCC...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTGAGGATTTTGCCAGGTaGGATGGGCTGACTTTGAAC +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVAREDFAR*DGLTLN
Trigger: GTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTC...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGGATTTTGCCAGGTaGGATGGGCTGACTTTGAAC +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGEDFAR*DGLTLN
Trigger: GTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTC...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAGCACATCTGAGGGCTaGTCACCCCTTTGGTTATGC +
Preference number: 4 (lower is better)
Translates to: RKVFGFPRSMGHHRSWYSSTSEG*SPLWLC
Trigger: GCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCT...TGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTAGGAGAGCAGTGGGCTaGCTTTGGTGGCGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLRRAVG*LWWRLY
Trigger: GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCT...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGGATGATGCATGGTCAGGGGTGGTaGCTCTTGGCTATGAAAATC +
Preference number: 4 (lower is better)
Translates to: TYSWSPCLEDRKEAMWMMHGQGW*LLAMKI
Trigger: GATTTTCATAGCCAAGAGCCACCACCCCTGACCATG...CATCATCCACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360273.7
ENST00000397077.6
CDS-3UTR CCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTCATGGTCAGGGGTGGTaGCTCTTGGCTATGAAAATC +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGHGQGW*LLAMKI
Trigger: GATTTTCATAGCCAAGAGCCACCACCCCTGACCATG...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR CCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGCCCATGCTGCTCCCTaGAACTGGCATCTACATGGT +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLAHAAP*NWHLHG
Trigger: ACCATGTAGATGCCAGTTCCAGGGAGCAGCATGGGC...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACACCCAAGGGTCAGCGCTaGACAAGAGGCTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTPKGQR*TRGCRV
Trigger: CACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGG...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACACCCAAGGGTCAGCGCTaGACAAGAGGCTGCCGGGTG +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTPKGQR*TRGCRV
Trigger: CACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGG...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAAGTAAAAGTCGCTGTTaGTCATGTCACCCATGTTTG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAARESKSRC*SCHPCL
Trigger: CAAACATGGGTGACATGACCAACAGCGACTTTTACT...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGTCATCTCTATGCTATaGTTGGGACAAGGGGACAAG +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGVISML*LGQGDK
Trigger: CTTGTCCCCTTGTCCCAACCATAGCATAGAGATGAC...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGGGTTGGGGAAAAGAGTaGCTTCCAACAACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVGWGKE*LPTTGG
Trigger: TCCTCCAGTTGTTGGAAGCCACTCTTTTCCCCAACC...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCGGTGGCATTTCAGCATaGTTGGGGAAAAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCGGISA*LGKRVA
Trigger: AGCCACTCTTTTCCCCAACCATGCTGAAATGCCACC...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCCTCCTCTTTCTCGTCTaGACCAGGGACAGATGGCGG +
Preference number: 4 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVLLFLV*TRDRWR
Trigger: CCGCCATCTGTCCCTGGTCCAGACGAGAAAGAGGAG...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAGCATCCCAAAGGTACTaGAGACTCCAAATTAAAGAG +
Preference number: 4 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREASQRY*RLQIKE
Trigger: CTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGC...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTAACTTTGAAAAGGCCTaGGGACTTCCTGCTATTGTC +
Preference number: 4 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTNFEKA*GLPAIV
Trigger: GACAATAGCAGGAAGTCCCCAGGCCTTTTCAAAGTT...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAGCAGCTTACGGAAGCTaGAGGCGGCACCATTCCCTC +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRAAYGS*RRHHSL
Trigger: GAGGGAATGGTGCCGCCTCCAGCTTCCGTAAGCTGC...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGGAGGTCACCATATTTaGCCTGGGCTATGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVGGHHI*PGLCPQ
Trigger: TTGGGGACATAGCCCAGGTCAAATATGGTGACCTCC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTACACCAACATCCGTCCTaGGCCCTCCATCACGTGGGT +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLHQHPS*ALHHVG
Trigger: ACCCACGTGATGGAGGGCTCAGGACGGATGTTGGTG...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAGCCACGGCTTCTTGTTaGCCACGAAGGTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRATASC*PRRCPQ
Trigger: CTGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGC...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAGATGGTGTAATGTTCTaGGGGTGGCGAATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKDGVMF*GWRMQG
Trigger: CCCCTGCATTCGCCACCCTCAGAACATTACACCATC...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTGATGGTGTAATGTTCTaGGGGTGGCGAATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSDGVMF*GWRMQG
Trigger: CCCCTGCATTCGCCACCCTCAGAACATTACACCATC...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCGCTCTCCTAACCCAATaGATATGCACCACATCCACT +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCALLTQ*ICTTST
Trigger: AGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGC...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: EVSVGPSCFYSISATSVLIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAGGCTCGAGTTCTGCTTaGGCGCGGCATCTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRGSSSA*ARHLLP
Trigger: TGGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCC...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGACCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGTCAAGCGAGTTTCATTaGGAGAAAAGTCTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMSSEFH*EKSLRA
Trigger: TGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGA...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCAGCAGCAAGCCATACTaGTCCTCATCCAATATGCCA +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCSSKPY*SSSNMP
Trigger: TGGCATATTGGATGAGGATCAGTATGGCTTGCTGCT...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAAACCTTTTCTCACCTGTaGTACTGTAGGGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: FSRVALILFVEEFSGPGETFSHL*YCRVSE
Trigger: TTCTGAAACCCTACAGTATCACAGGTGAGAAAAGGT...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTTCACGGACACATGACTaGTCAAAGAAGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLSRTHD*SKKWGD
Trigger: ATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGA...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTCACGGACACATGACTaGTCAAAGAAGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCSRTHD*SKKWGD
Trigger: ATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGA...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATCAAACACAGCTATCCTaGTGTCATGGAACGAGGTCA +
Preference number: 4 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNQTQLS*CHGTRS
Trigger: TGACCTCGTTCCATGACATCAGGATAGCTGTGTTTG...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAACCTCCTGGCTCCGAATaGACATGGAGCATGGTGTGC +
Preference number: 4 (lower is better)
Translates to: STLPQSLYRQCQREPIFEPPGSE*TWSMVC
Trigger: GCACACCATGCTCCATGTTCATTCGGAGCCAGGAGG...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATAGCATCCTTCATTCCTaGCAAGAGAAGACCAACGCT +
Preference number: 4 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNSILHS*QEKTNA
Trigger: AGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCT...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTTACTACAGTGAGTTTTaGCAAACCAACCATTTCGTG +
Preference number: 4 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFYYSEF*QTNHFV
Trigger: CACGAAATGGTTGGTTTGTCAAAACTCACTGTAGTA...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCTACCCCCTAATGGAGTaGACTGCCAAACGTACCCCA +
Preference number: 4 (lower is better)
Translates to: KLKRVSLREKSSSSALQIYPLME*TAKRTP
Trigger: TGGGGTACGTTTGGCAGTTCACTCCATTAGGGGGTA...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTTGTAAAAGAAGAGTaGAGGGACTCATCCCACCAC +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGFVKEE*RDSSHH
Trigger: GTGGTGGGATGAGTCCCTTCACTCTTCTTTTACAAA...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCTCTATTTCACAGCCCTaGGTGGACAGTAATTACAAT +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLSISQP*VDSNYN
Trigger: ATTGTAATTACTGTCCACTCAGGGCTGTGAAATAGA...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATGGCTTAGGGGGCAGGTaGAATGATGGGAGGAACAGC +
Preference number: 4 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYGLGGR*NDGRNS
Trigger: GCTGTTCCTCCCATCATTTCACCTGCCCCCTAAGCC...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCTTGGTTTGGAACTTTaGAAAGGCCTGGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: QASFIPDKRRPTLMLAFFLGLEL*KGLGTS
Trigger: GGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAG...GAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAACCAGGTCTGGAGCGGTaGCCGGCAAACCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKPGLER*PANLQQ
Trigger: CTGTTGAAGGTTTGCCGGGCACCGCTCCAGACCTGG...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGAAGAGTGAAGGGACTCATCCCACCACATAATAAGACATTAGAAATTGACAATTGCTCGATGCGGCTCTaGAGGCCCCGGAACTGTTTC +
Preference number: 4 (lower is better)
Translates to: RRVKGLIPPHNKTLEIDNCSMRL*RPRNCF
Trigger: GAAACAGTTCCGGGGCCTGCAGAGCCGCATCGAGCA...ATTGTCAATTTCTAATGTCTTATTATGTGGTGGGATGAGTCCCTTCACTCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGACCTGTTGTTTGGCTTTaGTCTGGCTGGCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGPVVWL*SGWRPH
Trigger: ATGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGG...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR GCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTCCTGTTGTTTGGCTTTaGTCTGGCTGGCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLPVVWL*SGWRPH
Trigger: ATGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGG...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR GCA 90 bp GTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACATCTCCATGGCGGCTaGCCCGTCCTGTTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: VFIASQPPVFLNHTNSQRHLHGG*PVLLFG
Trigger: GCCAAACAACAGGACGGGGCAGCCGCCATGGAGATG...TCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAATCTCAGAAGCCCCCTTaGTGTACATGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKSQKPP*CTCGSS
Trigger: AGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGA...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAGTCACGGCCACCACCTaGCGCTGCTCAGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTVTATT*RCSVCV
Trigger: CACACACACTGAGCAGCGGCAGGTGGTGGCCGTGAC...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAGTCGGCCTTCTTGAGTaGAGGCCCGTCGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLVGLLE*RPVVGP
Trigger: GGGACCAACGACGGGCCTGCACTCAAGAAGGCCGAC...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAGGCTTCCCTCCAAACTaGACGATCACTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWIGFPPN*TITIWM
Trigger: CATCCAGATAGTGATCGTGCAGTTTGGAGGGAAGCC...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTATCCACTGGTCCAGCTaGAGTGGAGAGCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLIHWSS*SGEQLN
Trigger: ATTCAGCTGCTCTCCACTGCAGCTGGACCAGTGGAT...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAACTGTGTGAGCCTGCCTaGCTCCTTGAGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKLCEPA*LLEELE
Trigger: CTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAG...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTGGAGATCCCGCCCCTTaGCTTGAAGTGAAAAAGAGT +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAGDPAP*LEVKKS
Trigger: ACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATGGTGGCTGGGCGGGTaGATGGCTGGTCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTWWLGG*MAGPCL
Trigger: CAGACATGGACCAGCCATGCACCCGCCCAGCCACCA...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: NSIAARERVCGWKRWFSLTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMAIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGAAAGTCTTCGAGCAGTaGTTTGCAGATCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLKVFEQ*FADPGI
Trigger: GATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTT...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTCACCCCTTTGGTTATaGAGTTCCTCTCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLSPLWL*SSSPGY
Trigger: GTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGA...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGTCACCCCTTTGGTTATaGAGTTCCTCTCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLSPLWL*SSSPGY
Trigger: GTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGA...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAACCCATGTTTTACACGTaGAGATCTTTCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: FSRVALILFVEEFSGPGEPMFYT*RSFLPC
Trigger: ACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGG...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTCCCATGTTTTACACGTaGAGATCTTTCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFPMFYT*RSFLPC
Trigger: ACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGG...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAAGTGAGAGTGAGGGGGTaGATGTGTGCAAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKVRVRG*MCASIL
Trigger: AAGGATGCTTGCACACATGCACCCCCTCACTCTCAC...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAACAGTGGGGCCCATGCTaGTCCCTGGAACTGGCATCT +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKQWGPC*SLELAS
Trigger: AGATGCCAGTTCCAGGGAGCAGCATGGGCCCCACTG...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAGTCACCCATGTTTGCTaGGGTCCTTGCTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKVTHVC*GPCSGW
Trigger: CCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGAC...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAGTCACCCATGTTTGCTaGGGTCCTTGCTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKVTHVC*GPCSGW
Trigger: CCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGAC...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTATTTCAGAACCACACTaGACGAGTCAGAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVISEPH*TSQKSQ
Trigger: CTGGCTCTTCTGACTCGTGCAGTGTGGTTCTGAAAT...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGCTCTTGTCATCTCTATaGTATGGTTGGGACAAGGGG +
Preference number: 4 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLLLSSL*YGWDKG
Trigger: CCCCTTGTCCCAACCATAGCATAGAGATGACAAGAG...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGACAGGCAAGAACTGCCTaGATCCCAAAGGTACTGGAG +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGQARTA*IPKVLE
Trigger: CTCCAGTACCTTTGGGATGCAGGCAGTTCTTGCCTG...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGCATTTCTTTGGTTTTTaGAGTAAAAGTCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWHFFGF*SKSRCW
Trigger: CCAACAGCGACTTTTACTCCAAAAACCAAAGAAATG...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTTTCCTGACAGCAGCATaGGGTCCTTGTCCACGGACT +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSFLTAA*GPCPRT
Trigger: AGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAA...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCTGTTTGGCTTTGCTCTaGCTGGCGTCCACATTGCCA +
Preference number: 4 (lower is better)
Translates to: KLKRVSLREKSSSSALQICLALL*LASTLP
Trigger: TGGCAATGTGGACGCCAGCCAGAGCAAAGCCAAACA...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGCCTTCTTGTGCATGCTaGCCTTCTTCCTGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVPSCAC*PSSCRQ
Trigger: CTGACGACAGGAAGAAGGCCAGCATGCACAAGAAGG...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTTCTTGTCTGAGCAGATaGCTGTGGCATTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLSCLSR*LWHCPW
Trigger: CCATGGGCAATGCCACAGCCATCTGCTCAGACAAGA...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAGGTATGCTTGTCCGTTaGGGAGGAGCGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKGMLVR*GGASQH
Trigger: GTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACC...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGAGGTATGCTTGTCCGTTaGGGAGGAGCGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: VFIASQPPVFLNHTNSQRGMLVR*GGASQH
Trigger: GTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACC...TCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTACGTTGACGGTGAGCTaGAACTGCAAGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARTLTVS*NCKNLE
Trigger: CTCCAAATTCTTGCAGTTCCAGCTCACCGTCAACGT...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTACGTTGACGGTGAGCTaGAACTGCAAGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCTLTVS*NCKNLE
Trigger: CTCCAAATTCTTGCAGTTCCAGCTCACCGTCAACGT...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGCTCCCGCTGTCGATCTaGAACATCTTCTCGCCAACA +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVLPLSI*NIFSPT
Trigger: TGTTGGCGAGAAGATGTTCCAGATCGACAGCGGGAG...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGACTCCCGCTGTCGATCTaGAACATCTTCTCGCCAACA +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGLPLSI*NIFSPT
Trigger: TGTTGGCGAGAAGATGTTCCAGATCGACAGCGGGAG...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGACGATCACTATCTGGATaGCAAAGGTGCCCAGCACGA +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGRSLSG*QRCPAR
Trigger: TCGTGCTGGGCACCTTTGCCATCCAGATAGTGATCG...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGATGCACCACATCCACTaGTCCAGCTGCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQMHHIH*SSCSGE
Trigger: CTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCAT...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTTCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLSMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGCAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCCACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTAGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTTAAACCCCTCAGGATaGCAACTCGGTAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCLNPSG*QLGSIW
Trigger: CCAAATGCTACCGAGTTGCCATCCTGAGGGGTTTAA...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACACATCCTTGGGCCGGATaGCCGTTAGTGTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTHPWAG*PLVLQT
Trigger: GGTTTGCAACACTAACGGCCATCCGGCCCAAGGATG...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTCATCCTTGGGCCGGATaGCCGTTAGTGTTGCAAACC +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSHPWAG*PLVLQT
Trigger: GGTTTGCAACACTAACGGCCATCCGGCCCAAGGATG...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAATGGCTTTCTGTTTaGGAAAGCAAGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMEWLSV*ESKTCC
Trigger: ACAGCAAGTCTTGCTTTCCCAAACAGAAAGCCATTC...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCATGTAGGGTTTCAGAATaGCTTTCTGTTTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIACRVSE*LSVWES
Trigger: GCTTTCCCAAACAGAAAGCCATTCTGAAACCCTACA...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCTGTAGGGTTTCAGAATaGCTTTCTGTTTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFCRVSE*LSVWES
Trigger: GCTTTCCCAAACAGAAAGCCATTCTGAAACCCTACA...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTTAAACCACAAACATTTCAGAACCACACTGCACGAGTCAGAAGAGCCAGCGATGAGGCGGAAAGTGTTTaGTTTTCCTCGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: FKPQTFQNHTARVRRASDEAESV*FSSKHG
Trigger: CCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTC...ATCGCTGGCTCTTCTGACTCGTGCAGTGTGGTTCTGAAATGTTTGTGGTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCGGCTCTTTTCCCGAGTaGCTCTCATCTTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: QASFIPDKRRPTLMLAFFGSFPE*LSSCLW
Trigger: CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCC...GAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGAGGATTTTGCCAGGTaGGATGGGCTGACTTTGAAC +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAEDFAR*DGLTLN
Trigger: GTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTC...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGGCTGGTCACCCCTTTaGTTATGCAGTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVGWSPL*LCSSSP
Trigger: AGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGCAGTGGGCTGGCTTTaGTGGCGTTTGTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLAVGWL*WRLYWN
Trigger: ATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGC...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCAGGAGAGCAGTGGGCTaGCTTTGGTGGCGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVRRAVG*LWWRLY
Trigger: GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCT...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTAGGAGAGCAGTGGGCTaGCTTTGGTGGCGTTTGTAC +
Preference number: 4 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCRRAVG*LWWRLY
Trigger: GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCT...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGAACTGAGAACCCCTCCTaGCTCCGAATGAACATGGAG +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGTENPS*LRMNME
Trigger: CTCCATGTTCATTCGGAGCCAGGAGGGGTTCTCAGT...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATACTACATGGTCAGGGGTaGTGGCTCTTGGCTATGAAA +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWILHGQG*WLLAMK
Trigger: TTTCATAGCCAAGAGCCACCACCCCTGACCATGTAG...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR CCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAGCTGCTCCCTGGAACTaGCATCTACATGGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: STLPQSLYRQCQREPIFEAAPWN*HLHGQG
Trigger: CCCCTGACCATGTAGATGCCAGTTCCAGGGAGCAGC...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAATCAGCACACCCTCACTaGTCAGCTGTGGCACCAGGC +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKSAHPH*SAVAPG
Trigger: GCCTGGTGCCACAGCTGACCAGTGAGGGTGTGCTGA...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTAGTAAAAGTCGCTGTTaGTCATGTCACCCATGTTTG +
Preference number: 4 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFSKSRC*SCHPCL
Trigger: CAAACATGGGTGACATGACCAACAGCGACTTTTACT...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGCAGGGGGTGGAGGACTaGGCACAATTTAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSQGVED*AQFKVY
Trigger: ATAAACTTTAAATTGTGCCCAGTCCTCCACCCCCTG...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS-3UTR CCA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATAGAAGTGCAGACAACTaGGCCACACATTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHRSADN*ATHSFP
Trigger: TGGGAAAGAATGTGTGGCCCAGTTGTCTGCACTTCT...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCAGAAGTGCAGACAACTaGGCCACACATTCTTTCCCA +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCRSADN*ATHSFP
Trigger: TGGGAAAGAATGTGTGGCCCAGTTGTCTGCACTTCT...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAGCAGCTTACGGAAGCTaGAGGCGGCACCATTCCCTC +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKAAYGS*RRHHSL
Trigger: GAGGGAATGGTGCCGCCTCCAGCTTCCGTAAGCTGC...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAGCAGCTTACGGAAGCTaGAGGCGGCACCATTCCCTC +
Preference number: 4 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLAAYGS*RRHHSL
Trigger: GAGGGAATGGTGCCGCCTCCAGCTTCCGTAAGCTGC...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CAA 72 bp AATTGGTCCAGTCTCAGAAATAGGACTGCCTCTCTCTaGTCATCTCTATGCTATGGTTGGGACAAGGGGACA +
Preference number: 4 (lower is better)
Translates to: NWSSLRNRTASL*SSLCYGWDKGT
Trigger: TGTCCCCTTGTCCCAACCATAGCATAGAGATGACAAGAGAGAGGCAGTCCTATTTCTGAGACTGGACCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGACAAACCTTCAACAGGTaGGGTTTTGAGGCGCCGGCA +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRQTFNR*GFEAPA
Trigger: TGCCGGCGCCTCAAAACCTCACCTGTTGAAGGTTTG...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAGACCACACAGATAACTaGGAGGAGAATGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKDHTDN*EENGGP
Trigger: GGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTC...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAACATCACGTGGGTTCCTaGCAGCAGCATGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKHHVGS*QQHGVL
Trigger: AAGGACCCCATGCTGCTGTCAGGAACCCACGTGATG...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTACATCACGTGGGTTCCTaGCAGCAGCATGGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLHHVGS*QQHGVL
Trigger: AAGGACCCCATGCTGCTGTCAGGAACCCACGTGATG...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACATGCGGATCCTCCTGTTaGACTCCTTGCCCTCGAGGC +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTCGSSC*TPCPRG
Trigger: GCCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCA...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAGCAGTGGAGAGCAGCTaGATGGCTTCCCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: STLPQSLYRQCQREPIFEAVESS*MASLQT
Trigger: AGTTTGGAGGGAAGCCATTCAGCTGCTCTCCACTGC...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTCRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTATGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLCRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACATGTCGGTCGTCAGGTTaGTCCCACTGTCGATGGCGC +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTCRSSG*SHCRWR
Trigger: GCGCCATCGACAGTGGGATCAACCTGACGACCGACA...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAAAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 4 (lower is better)
Translates to: FSRVALILFVEEFSGPGEKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCAATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAGCAGCAAGCCATACTaGTCCTCATCCAATATGCCA +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWISSKPY*SSSNMP
Trigger: TGGCATATTGGATGAGGATCAGTATGGCTTGCTGCT...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAACCTTTTCTCACCTGTaGTACTGTAGGGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGTFSHL*YCRVSE
Trigger: TTCTGAAACCCTACAGTATCACAGGTGAGAAAAGGT...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCTTCACGACATTCAGGTaGTGCGCTCTTGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: KLKRVSLREKSSSSALQIFTTFR*CALEGP
Trigger: AGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAA...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATATCACGGACACATGACTaGTCAAAGAAGTGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWISRTHD*SKKWGD
Trigger: ATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGA...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTGAGGTCACGGACACATaGCTGATCAAAGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSEVTDT*LIKEVG
Trigger: CCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTC...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCATACTACAGTGAGTTTTaGCAAACCAACCATTTCGTG +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSYYSEF*QTNHFV
Trigger: CACGAAATGGTTGGTTTGTCAAAACTCACTGTAGTA...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGTTTGTAAAAGAAGAGTaGAGGGACTCATCCCACCAC +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVFVKEE*RDSSHH
Trigger: GTGGTGGGATGAGTCCCTTCACTCTTCTTTTACAAA...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTTCTATTTCACAGCCCTaGGTGGACAGTAATTACAAT +
Preference number: 4 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTSISQP*VDSNYN
Trigger: ATTGTAATTACTGTCCACTCAGGGCTGTGAAATAGA...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGACGTCTTCTGGTTAAATaGGAGGTGTCAGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGRLLVK*EVSGSG
Trigger: TCCAGACCCTGACACCTCTCATTTAACCAGAAGACG...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000460129.5
ENST00000646379.1
CDS-3UTR GCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACACCAGGTCTGGAGCGGTaGCCGGCAAACCTTCAACAG +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTPGLER*PANLQQ
Trigger: CTGTTGAAGGTTTGCCGGGCACCGCTCCAGACCTGG...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000643662.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTACCCCTCGATCCAACCTaGCTCTGCCTCTCCTTCATC +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLPLDPT*LCLSFI
Trigger: GATGAAGGAGAGGCAGAGGCAGGTTGGATCGAGGGG...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAACCTTGTCCACGGACTTaGGCACCTGGTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKPCPRT*APGQTL
Trigger: GAGAGTCTGACCAGGTGCGCAAGTCCGTGGACAAGG...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTCCACATTGCCATCCTaGATTTTACCATTGACTAGG +
Preference number: 4 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLSTLPS*ILPLTR
Trigger: CCTAGTCAATGGTAAAATGCAGGATGGCAATGTGGA...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
CDS-3UTR GCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCCTGTACCACTGTCATaGGATTGGTGGTCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYPVPLS*DWWSAC
Trigger: GCACGCTGACCACCAATCGCATGACAGTGGTACAGG...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGTTGTCAATTCGCTCCTaGTCAATCTCCCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVLSIRS*SISPFS
Trigger: CGAGAAGGGGGAGATTGAGCAGGAGCGAATTGACAA...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACACCTTTAACCAGGGTATaGTTGTCCGTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTPLTRV*LSVGEE
Trigger: CTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGG...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTCACCCAGAGCATCTaGACGGCCTTCAGAGGGGAG +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLFTQSI*TAFRGE
Trigger: CTCCCCTCTGAAGGCCGTGCAGATGCTCTGGGTGAA...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTATCCACTGGTCCAGCTaGAGTGGAGAGCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSIHWSS*SGEQLN
Trigger: ATTCAGCTGCTCTCCACTGCAGCTGGACCAGTGGAT...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAAGGCGGGCTCGAGTTCTaGTTGAGCGCGGCATCTTCT +
Preference number: 4 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKGGLEF*LSAASS
Trigger: AGAAGATGCCGCGCTCAAGCAGAACTCGAGCCCGCC...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGCCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: SLREKSSSSALQILASLGRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIATETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTCCCTGGACTTGAAGAGGTAGCTGATTTGCTTGTGTCGGTCGTCAGGTTGATCATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LPGLEEVADLLVSVVRLIIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...GATCAACCTGACGACCGACACAAGCAAATCAGCTACCTCTTCAAGTCCAGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTCTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATCTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCCTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGCTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTAAAGTCTTCGAGCAGTaGTTTGCAGATCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAKVFEQ*FADPGI
Trigger: GATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTT...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAAACCATGTTCCAAGGCTaGCCCATGTTTTACACGTGC +
Preference number: 4 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKTMFQG*PMFYTC
Trigger: GCACGTGTAAAACATGGGGCAGCCTTGGAACATGGT...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCGAGGGGGTGCATGTGTaGAAGCATCCTTCATTCCTG +
Preference number: 4 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVEGVHV*KHPSFL
Trigger: CAGGAATGAAGGATGCTTGCACACATGCACCCCCTC...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACAGAGGGGGTGCATGTGTaGAAGCATCCTTCATTCCTG +
Preference number: 4 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTEGVHV*KHPSFL
Trigger: CAGGAATGAAGGATGCTTGCACACATGCACCCCCTC...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AGAAGAGTGAAGGGACTCATCCCACCACATAATAAGACATTAGAAATTGACAATAATCACCACCAATCCTaGACGGTTTCCCGGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RRVKGLIPPHNKTLEIDNNHHQS*TVSRRA
Trigger: TGCCCGCCGGGAAACCGTGCAGGATTGGTGGTGATT...ATTGTCAATTTCTAATGTCTTATTATGTGGTGGGATGAGTCCCTTCACTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360273.7
ENST00000397077.6
CDS-3UTR GCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAGTCACCCATGTTTGCTaGGGTCCTTGCTCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTVTHVC*GPCSGW
Trigger: CCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGAC...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTAGTCCTTTGAGCCAGTaGAGTCATTTTAATTGGTCC +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVSPLSQ*SHFNWS
Trigger: GGACCAATTAAAATGACTGCACTGGCTCAAAGGACT...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTCTCTCAAGATCAGGATaGCCTTTTTGTCCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLLSRSG*PFCPSL
Trigger: TAAAGAGGGACAAAAAGGGCATCCTGATCTTGAGAG...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCCATTTCTTTGGTTTTTaGAGTAAAAGTCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIHFFGF*SKSRCW
Trigger: CCAACAGCGACTTTTACTCCAAAAACCAAAGAAATG...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCATTTCTTTGGTTTTTaGAGTAAAAGTCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: QDATQGKCLLGRAVFIASHFFGF*SKSRCW
Trigger: CCAACAGCGACTTTTACTCCAAAAACCAAAGAAATG...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGTCACCATATTTGACCTaGGCTATGTCCCCAACCACG +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVSPYLT*AMSPTT
Trigger: CGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGA...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAACCTTCTTGTGCATGCTaGCCTTCTTCCTGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKPSCAC*PSSCRQ
Trigger: CTGACGACAGGAAGAAGGCCAGCATGCACAAGAAGG...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTCCTTCTTGTGCATGCTaGCCTTCTTCCTGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSPSCAC*PSSCRQ
Trigger: CTGACGACAGGAAGAAGGCCAGCATGCACAAGAAGG...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTAGTACAACTTCTCCTCTaGCATCTGGCTGCGCACGGG +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLVQLLL*HLAAHG
Trigger: CCCGTGCGCAGCCAGATGCCAGAGGAGAAGTTGTAC...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAGGTATGCTTGTCCGTTaGGGAGGAGCGAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLGMLVR*GGASQH
Trigger: GTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACC...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAACGTTGACGGTGAGCTaGAACTGCAAGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: RKVFGFPRSMGHHRSWYSTLTVS*NCKNLE
Trigger: CTCCAAATTCTTGCAGTTCCAGCTCACCGTCAACGT...TGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCTGCACGATCACTATCTaGATGGCAAAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCCTITI*MAKVPS
Trigger: GCTGGGCACCTTTGCCATCCAGATAGTGATCGTGCA...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTTGCACGATCACTATCTaGATGGCAAAGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSCTITI*MAKVPS
Trigger: GCTGGGCACCTTTGCCATCCAGATAGTGATCGTGCA...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAGCTACATCCTGGCTCTaGCTGGTGACCGAGGACTGT +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKATSWL*LVTEDC
Trigger: ACAGTCCTCGGTCACCAGCCAGAGCCAGGATGTAGC...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: STLPQSLYRQCQREPIFERGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCTCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 4 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCSMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATCTCCAGGCTGTGGATaGGGCTCCCTGGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLSPGCG*GSLDLK
Trigger: CTTCAAGTCCAGGGAGCCCCATCCACAGCCTGGAGA...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAAGTTGGGTGCCTGGATaGATGGGTGCCCGGAAAGCG +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTSWVPG*MGARKA
Trigger: CGCTTTCCGGGCACCCATCCATCCAGGCACCCAACT...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGATGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: RKVFGFPRSMGHHRSWYSERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...TGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAATGGTCCATGTCTGGGTaGGAGCCAGGAAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKWSMSG*EPGRAC
Trigger: ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCA...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGACACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGGATGATGGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: TYSWSPCLEDRKEAMWMMVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...CATCATCCACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTATCTACCTATCTATATaGACGTATACAGTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFIYLSI*TYTVSE
Trigger: TTCCGAGACTGTATACGTCCATATAGATAGGTAGAT...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTGAATGGCTTTCTGTTTaGGAAAGCAAGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVEWLSV*ESKTCC
Trigger: ACAGCAAGTCTTGCTTTCCCAAACAGAAAGCCATTC...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGTGTAGGGTTTCAGAATaGCTTTCTGTTTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWCRVSE*LSVWES
Trigger: GCTTTCCCAAACAGAAAGCCATTCTGAAACCCTACA...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGGACATCATCGATCATaGTATTCAAAATGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAGHHRS*YSKCLL
Trigger: CAAAAGACATTTTGAATACCATGATCGATGATGTCC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTTTCCTCGAAGCATaGGACATCATCGATCATGGT +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLVFLEA*DIIDHG
Trigger: ACCATGATCGATGATGTCCCATGCTTCGAGGAAAAC...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGAGGCGGAAAGTGTTTaGTTTTCCTCGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLEAESV*FSSKHG
Trigger: CCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTC...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTTGGTGGCGTTTGTACTaGAATCCAATAAGCACATCT +
Preference number: 4 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSWWRLY*NPISTS
Trigger: AGATGTGCTTATTGGATTCCAGTACAAACGCCACCA...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGACTTGTAGGAGAGCAGTaGGCTGGCTTTGGTGGCGTT +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRLVGEQ*AGFGGV
Trigger: AACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAG...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTGGATTTTGGACACAATaGCAGGAGAGAGATTTGGGT +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARGFWTQ*QERDLG
Trigger: ACCCAAATCTCTCTCCTGCCATTGTGTCCAAAATCC...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCCTAATGGTGGGATTTTaGACACAATGGCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCLMVGF*TQWQER
Trigger: TCTCTCCTGCCATTGTGTCCAAAATCCCACCATTAG...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CGGCTTCAAGGAAGCCAAGAGTCTGGGATTGATTCACATTCATTTCAGGCTCAACTAATGGTGGGATTTTaGACACAATGGCAGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RLQGSQESGIDSHSFQAQLMVGF*TQWQER
Trigger: TCTCTCCTGCCATTGTGTCCAAAATCCCACCATTAG...TTGAGCCTGAAATGAATGTGAATCAATCCCAGACTCTTGGCTTCCTTGAAGCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS-3UTR CCA 90 bp CGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCACAGGAGAGCTTGGTTTaGAACTTTGAAAAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RKVFGFPRSMGHHRSWYSQESLV*NFEKAW
Trigger: CCAGGCCTTTTCAAAGTTCCAAACCAAGCTCTCCTG...TGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGCTCCCCCACCTGGGTTaGTATGATCTCTACATTAAA +
Preference number: 4 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLLPHLG*YDLYIK
Trigger: TTTAATGTAGAGATCATACCAACCCAGGTGGGGGAG...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
3UTR CAA 72 bp TCTCAGAACCAAATCTGCCACTTACTCCTGGAGCCCTaGTCTAGAGGACAGAAAAGAAGCTATGTGGATGAT +
Preference number: 4 (lower is better)
Translates to: SQNQICHLLLEP*SRGQKRSYVDD
Trigger: ATCATCCACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAGACCACACAGATAACTaGGAGGAGAATGGCGGCCCC +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTDHTDN*EENGGP
Trigger: GGGGCCGCCATTCTCCTCTCAGTTATCTGTGTGGTC...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000643662.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAGGAGGTCACCATATTTaGCCTGGGCTATGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRGGHHI*PGLCPQ
Trigger: TTGGGGACATAGCCCAGGTCAAATATGGTGACCTCC...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTTCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 4 (lower is better)
Translates to: EVSVGPSCFYSISATSVLKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AGGAGAGCTTGGTTTGGAACTTTGAAAAGGCCTGGGGACTTCCTGCTATTGTCTAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 4 (lower is better)
Translates to: RRAWFGTLKRPGDFLLLSKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...AGACAATAGCAGGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAGCTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSNSIAARERVCGWKRWFMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAAATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VMERGHGHMTDQRSGEMEMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTCAAGCGAGTTTCATTaGGAGAAAAGTCTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCSSEFH*EKSLRA
Trigger: TGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGA...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCTCAAGCGAGTTTCATTaGGAGAAAAGTCTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLSSEFH*EKSLRA
Trigger: TGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGA...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTCAAGCGAGTTTCATTaGGAGAAAAGTCTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCSSEFH*EKSLRA
Trigger: TGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGA...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAGTAGGCCCTCCCAGTTaGCTATGGCTCTTTTCCCGA +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKVGPPS*LWLFSR
Trigger: TCGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTAC...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATGAGGTCACGGACACATaGCTGATCAAAGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYEVTDT*LIKEVG
Trigger: CCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTC...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAGAGGTCACGGACACATaGCTGATCAAAGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLREVTDT*LIKEVG
Trigger: CCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTC...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATAATGGAGGCTGCTCCTaGGTTAAAGAAAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYNGGCS*VKESSA
Trigger: GGCGGAGCTTTCTTTAACTCAGGAGCAGCCTCCATT...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTCCACATTGCCATCCTaGATTTTACCATTGACTAGG +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARSTLPS*ILPLTR
Trigger: CCTAGTCAATGGTAAAATGCAGGATGGCAATGTGGA...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR GCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTTTGTCAATTCGCTCCTaGTCAATCTCCCCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSLSIRS*SISPFS
Trigger: CGAGAAGGGGGAGATTGAGCAGGAGCGAATTGACAA...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTACTGTGTGAGCCTGCCTaGCTCCTTGAGGAACTTGAG +
Preference number: 4 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLLCEPA*LLEELE
Trigger: CTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAG...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR GCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCAATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: IAARERVCGWKRWFSLQYIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTGGAAACAAGGCAACATaGCGGCAAAGAAACTTTATA +
Preference number: 4 (lower is better)
Translates to: EVSVGPSCFYSISATSVLGNKAT*RQRNFI
Trigger: TATAAAGTTTCTTTGCCGGCATGTTGCCTTGTTTCC...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGACTGAGACCCACAAAGTaGTTAGCAGTTAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGLRPTK*LAVKRL
Trigger: CAGCCTCTTAACTGCTAAGCACTTTGTGGGTCTCAG...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTTCACCCCTTTGGTTATaGAGTTCCTCTCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLSPLWL*SSSPGY
Trigger: GTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGA...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTCCCATGTTTTACACGTaGAGATCTTTCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARPMFYT*RSFLPC
Trigger: ACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGG...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACATCTCAGAACCAAATCTaGCACTTACTCCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTSQNQI*HLLLEP
Trigger: GGGCTCCAGGAGTAAGTGGCAGATTTGGTTCTGAGA...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCAAGCTCCGCCTGAGTTaGAAGAAGGAAACTCCTCAG +
Preference number: 4 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVKLRLS*KKETPQ
Trigger: CTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTT...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCAGTCCTTTGAGCCAGTaGAGTCATTTTAATTGGTCC +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLSPLSQ*SHFNWS
Trigger: GGACCAATTAAAATGACTGCACTGGCTCAAAGGACT...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAACAGGCAAGAACTGCCTaGATCCCAAAGGTACTGGAG +
Preference number: 4 (lower is better)
Translates to: STLPQSLYRQCQREPIFEQARTA*IPKVLE
Trigger: CTCCAGTACCTTTGGGATGCAGGCAGTTCTTGCCTG...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTCCTGACAGCAGCATaGGGTCCTTGTCCACGGACT +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLFLTAA*GPCPRT
Trigger: AGTCCGTGGACAAGGACCCCATGCTGCTGTCAGGAA...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGACCTTCTTGTGCATGCTaGCCTTCTTCCTGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRPSCAC*PSSCRQ
Trigger: CTGACGACAGGAAGAAGGCCAGCATGCACAAGAAGG...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGATCTTGTCTGAGCAGATaGCTGTGGCATTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRSCLSR*LWHCPW
Trigger: CCATGGGCAATGCCACAGCCATCTGCTCAGACAAGA...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTACTTCAATCTGTGTCTaGATCCGATTCAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSTSICV*IRFRPR
Trigger: CCGAGGCCTGAATCGGATCCAGACACAGATTGAAGT...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAAGATTGGCTACATCCTaGCTCTGGCTGGTGACCGAG +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKRLATS*LWLVTE
Trigger: CTCGGTCACCAGCCAGAGCCAGGATGTAGCCAATCT...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTAAGGGGGATGTGGGGCTaGGAATCTTCGATCCGGAAT +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLRGMWG*ESSIRN
Trigger: ATTCCGGATCGAAGATTCCCAGCCCCACATCCCCCT...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAAATCTACCTATCTATATaGACGTATACAGTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: FSRVALILFVEEFSGPGEIYLSI*TYTVSE
Trigger: TTCCGAGACTGTATACGTCCATATAGATAGGTAGAT...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGATCTACCTATCTATATaGACGTATACAGTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWIYLSI*TYTVSE
Trigger: TTCCGAGACTGTATACGTCCATATAGATAGGTAGAT...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAAGATCCTGGCATCCTTaGGCCGGATGGCCGTTAGTG +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTRSWHP*AGWPLV
Trigger: CACTAACGGCCATCCGGCCCAAGGATGCCAGGATCT...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTGGACATCATCGATCATaGTATTCAAAATGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTGHHRS*YSKCLL
Trigger: CAAAAGACATTTTGAATACCATGATCGATGATGTCC...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGATGTGGAAGAGTTCTCTaGGCCTGGAGAAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VFIASQPPVFLNHTNSQRCGRVL*AWRREG
Trigger: CCCTTCCCTTCTCCAGGCCCAGAGAACTCTTCCACA...TCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAATGTGGAAGAGTTCTCTaGGCCTGGAGAAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKCGRVL*AWRREG
Trigger: CCCTTCCCTTCTCCAGGCCCAGAGAACTCTTCCACA...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTGAGGATTTTGCCAGGTaGGATGGGCTGACTTTGAAC +
Preference number: 4 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCEDFAR*DGLTLN
Trigger: GTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTC...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATAGCACATCTGAGGGCTaGTCACCCCTTTGGTTATGC +
Preference number: 4 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYSTSEG*SPLWLC
Trigger: GCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCT...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCGCTATCCTGATGTCATaGAACGAGGTCACGGACACA +
Preference number: 4 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVAILMS*NEVTDT
Trigger: TGTGTCCGTGACCTCGTTCCATGACATCAGGATAGC...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGGCTATCCTGATGTCATaGAACGAGGTCACGGACACA +
Preference number: 4 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQAILMS*NEVTDT
Trigger: TGTGTCCGTGACCTCGTTCCATGACATCAGGATAGC...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGAGTAAAAGTCGCTGTTaGTCATGTCACCCATGTTTG +
Preference number: 4 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLSKSRC*SCHPCL
Trigger: CAAACATGGGTGACATGACCAACAGCGACTTTTACT...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTGGTGGCATTTCAGCATaGTTGGGGAAAAGAGTGGCT +
Preference number: 4 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCGGISA*LGKRVA
Trigger: AGCCACTCTTTTCCCCAACCATGCTGAAATGCCACC...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCAGGGGGTGGAGGACTaGGCACAATTTAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: QASFIPDKRRPTLMLAFFQGVED*AQFKVY
Trigger: ATAAACTTTAAATTGTGCCCAGTCCTCCACCCCCTG...GAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGGCATCCCAAAGGTACTaGAGACTCCAAATTAAAGAG +
Preference number: 4 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLASQRY*RLQIKE
Trigger: CTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGC...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGGCATCCCAAAGGTACTaGAGACTCCAAATTAAAGAG +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVASQRY*RLQIKE
Trigger: CTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGC...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTGGATTTTGGACACAATaGCAGGAGAGAGATTTGGGT +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAGFWTQ*QERDLG
Trigger: ACCCAAATCTCTCTCCTGCCATTGTGTCCAAAATCC...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTCCCCTCCACGTCTTCTaGTTAAATGAGAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSPLHVF*LNERCQ
Trigger: CTGACACCTCTCATTTAACCAGAAGACGTGGAGGGG...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460129.5
ENST00000646379.1
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTCAGCTCGTCTGCTTaGGGGTTCACAGTCCACGCT +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLFSSSA*GFTVHA
Trigger: AGCGTGGACTGTGAACCCCCAAGCAGACGAGCTGAA...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646379.1
3UTR CAA 72 bp ATGAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTaGGTTTTCCTCGAAGCATGGGACATCATCGATCAT +
Preference number: 4 (lower is better)
Translates to: MRNGFCKRGGKC*VFLEAWDIIDH
Trigger: ATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
3UTR CAA 72 bp GAACAGCAGGCTTCTCTCAAGATCAGGATGCCCTTTTaGTCCCTCTTTACAGAACATAGTCTATTTCACAGC +
Preference number: 4 (lower is better)
Translates to: EQQASLKIRMPF*SLFTEHSLFHS
Trigger: GCTGTGAAATAGACTATGTTCTGTAAAGAGGGACAAAAAGGGCATCCTGATCTTGAGAGAAGCCTGCTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAGCTCTCCCGCCCCATTaGGGATTTTGCAGCACTTCT +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTALPPH*GFCSTS
Trigger: AGAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGC...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACAGCTCTCCTAACCCAATaGATATGCACCACATCCACT +
Preference number: 4 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTALLTQ*ICTTST
Trigger: AGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGC...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTGCTCTCCTAACCCAATaGATATGCACCACATCCACT +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSALLTQ*ICTTST
Trigger: AGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGC...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 4 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGACCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTACATTTGGCTTCTGCCTaGGCCTCTCACGGTAGTGAC +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLHLASA*ASHGSD
Trigger: GTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATG...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCAGCAGCAAGCCATACTaGTCCTCATCCAATATGCCA +
Preference number: 4 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCSSKPY*SSSNMP
Trigger: TGGCATATTGGATGAGGATCAGTATGGCTTGCTGCT...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATCCAATAAGCACATCTaGGGGCTGGTCACCCCTTTG +
Preference number: 4 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLSNKHI*GLVTPL
Trigger: CAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGA...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCCAAACACAGCTATCCTaGTGTCATGGAACGAGGTCA +
Preference number: 4 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVQTQLS*CHGTRS
Trigger: TGACCTCGTTCCATGACATCAGGATAGCTGTGTTTG...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTAGCATCCTTCATTCCTaGCAAGAGAAGACCAACGCT +
Preference number: 4 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCSILHS*QEKTNA
Trigger: AGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCT...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTACTACAGTGAGTTTTaGCAAACCAACCATTTCGTG +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCYYSEF*QTNHFV
Trigger: CACGAAATGGTTGGTTTGTCAAAACTCACTGTAGTA...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTCTTTATGTACTACAGTaGGTTTTGACAAACCAACCA +
Preference number: 4 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLLYVLQ*VLTNQP
Trigger: TGGTTGGTTTGTCAAAACTCACTGTAGTACATAAAG...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGCTTTATGTACTACAGTaGGTTTTGACAAACCAACCA +
Preference number: 4 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWLYVLQ*VLTNQP
Trigger: TGGTTGGTTTGTCAAAACTCACTGTAGTACATAAAG...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp AGAAGAGTGAAGGGACTCATCCCACCACATAATAAGACATTAGAAATTGACAATAATGGAGGCTGCTCCTaGGTTAAAGAAAGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RRVKGLIPPHNKTLEIDNNGGCS*VKESSA
Trigger: GGCGGAGCTTTCTTTAACTCAGGAGCAGCCTCCATT...ATTGTCAATTTCTAATGTCTTATTATGTGGTGGGATGAGTCCCTTCACTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAGTTAGCAAAGTGTGGTaGCCCCCGAGAGGAAAGGTC +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLVSKVW*PPRGKV
Trigger: GACCTTTCCTCTCGGGGGTCACCACACTTTGCTAAC...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTTCCACATTGCCATCCTaGATTTTACCATTGACTAGG +
Preference number: 4 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVASTLPS*ILPLTR
Trigger: CCTAGTCAATGGTAAAATGCAGGATGGCAATGTGGA...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR GCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATCTCAGAAGCCCCCTTaGTGTACATGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLSQKPP*CTCGSS
Trigger: AGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGA...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTACCTTTAACCAGGGTATaGTTGTCCGTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLPLTRV*LSVGEE
Trigger: CTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGG...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AGAAGAGTGAAGGGACTCATCCCACCACATAATAAGACATTAGAAATTGACAATTGGGGTTCCGGAAGATaGCGTCAAAGACATTGCGCT +
Preference number: 4 (lower is better)
Translates to: RRVKGLIPPHNKTLEIDNWGSGR*RQRHCA
Trigger: AGCGCAATGTCTTTGACGGCATCTTCCGGAACCCCA...ATTGTCAATTTCTAATGTCTTATTATGTGGTGGGATGAGTCCCTTCACTCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAATTGTTGCTCGTTGCTaGTTGGGTGAGTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLIVARC*LGELGA
Trigger: GGCACCCAACTCACCCAAGCAGCAACGAGCAACAAT...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TTCAGAGATACTTCTTCACGACATTCAGGTGATGCGCTCTTGAAGGTCCTCCTTAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: FRDTSSRHSGDALLKVLLRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...AAGGAGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAAGAAGTATCTCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTAGAAAAGAGTCTGTTTaGAGTTCCCGCCTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCRKESV*SSRLRK
Trigger: TTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCT...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTCTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGGAAACAAGGCAACATaGCGGCAAAGAAACTTTATA +
Preference number: 4 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGGNKAT*RQRNFI
Trigger: TATAAAGTTTCTTTGCCGGCATGTTGCCTTGTTTCC...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGGAAACAAGGCAACATaGCGGCAAAGAAACTTTATA +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVGNKAT*RQRNFI
Trigger: TATAAAGTTTCTTTGCCGGCATGTTGCCTTGTTTCC...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCTCTGTACAGACAGTaGCAAAGAGAACCTATTTTT +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVSLYRQ*QREPIF
Trigger: AAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGA...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATCTCTGTACAGACAGTaGCAAAGAGAACCTATTTTT +
Preference number: 4 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLSLYRQ*QREPIF
Trigger: AAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGA...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGGATCCTCATCCAATATaGCAACAGCTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQDPHPI*QQLRCC
Trigger: GCAGCATCTGAGCTGTTGGCATATTGGATGAGGATC...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAATCACCCCTTTGGTTATaGAGTTCCTCTCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKSPLWL*SSSPGY
Trigger: GTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGA...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAGAGGGGGTGCATGTGTaGAAGCATCCTTCATTCCTG +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKEGVHV*KHPSFL
Trigger: CAGGAATGAAGGATGCTTGCACACATGCACCCCCTC...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAGTGAGAGTGAGGGGGTaGATGTGTGCAAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKVRVRG*MCASIL
Trigger: AAGGATGCTTGCACACATGCACCCCCTCACTCTCAC...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCAGTCCTTTGAGCCAGTaGAGTCATTTTAATTGGTCC +
Preference number: 4 (lower is better)
Translates to: QASFIPDKRRPTLMLAFFSPLSQ*SHFNWS
Trigger: GGACCAATTAAAATGACTGCACTGGCTCAAAGGACT...GAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTCATTTCTTTGGTTTTTaGAGTAAAAGTCGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGHFFGF*SKSRCW
Trigger: CCAACAGCGACTTTTACTCCAAAAACCAAAGAAATG...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAATCTTGTCTGAGCAGATaGCTGTGGCATTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKSCLSR*LWHCPW
Trigger: CCATGGGCAATGCCACAGCCATCTGCTCAGACAAGA...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAACTCCCGCTGTCGATCTaGAACATCTTCTCGCCAACA +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKLPLSI*NIFSPT
Trigger: TGTTGGCGAGAAGATGTTCCAGATCGACAGCGGGAG...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAATGCACCACATCCACTaGTCCAGCTGCAGTGGAGAG +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTMHHIH*SSCSGE
Trigger: CTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCAT...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAATCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKSMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAATTGCTCGTTGCTGCTTaGGTGAGTTGGGTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKLLVAA*VSWVPG
Trigger: TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAA...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTAAGGAAGGGCTTGTTTTaGGAAAACCGCTCACTCCCG +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLRKGLF*ENRSLP
Trigger: CGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCT...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTATCTACCTATCTATATaGACGTATACAGTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVIYLSI*TYTVSE
Trigger: TTCCGAGACTGTATACGTCCATATAGATAGGTAGAT...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAACAACTCGGTAGCATTTaGCTTCTGCCTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKQLGSI*LLPEPL
Trigger: GAGAGGCTCAGGCAGAAGCCAAATGCTACCGAGTTG...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAACAACTCGGTAGCATTTaGCTTCTGCCTGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKQLGSI*LLPEPL
Trigger: GAGAGGCTCAGGCAGAAGCCAAATGCTACCGAGTTG...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTGGACATCATCGATCATaGTATTCAAAATGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTGHHRS*YSKCLL
Trigger: CAAAAGACATTTTGAATACCATGATCGATGATGTCC...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAAGTTTTCCTCGAAGCATaGGACATCATCGATCATGGT +
Preference number: 4 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKVFLEA*DIIDHG
Trigger: ACCATGATCGATGATGTCCCATGCTTCGAGGAAAAC...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTAAGCACATCTGAGGGCTaGTCACCCCTTTGGTTATGC +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLSTSEG*SPLWLC
Trigger: GCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCT...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAGCAGTGGGCTGGCTTTaGTGGCGTTTGTACTGGAAT +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKAVGWL*WRLYWN
Trigger: ATTCCAGTACAAACGCCACCAAAGCCAGCCCACTGC...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGAGAAAAGAAGCTATGTaGATGATGCAGTCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: EEWILQERRKVFGFPRSMRKEAM*MMQSQS
Trigger: ACTTTGGGACTGCATCATCCACATAGCTTCTTTTCT...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTATAGTTAAAATTGTATaGCTGGTGCCAGATGAGACA +
Preference number: 4 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVIVKIV*LVPDET
Trigger: TGTCTCATCTGGCACCAGCCATACAATTTTAACTAT...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp AGAAGAGTGAAGGGACTCATCCCACCACATAATAAGACATTAGAAATTGACAATGAATGGGACAGGGGGTaGAGGACTGGGCACAATTTA +
Preference number: 4 (lower is better)
Translates to: RRVKGLIPPHNKTLEIDNEWDRG*RTGHNL
Trigger: TAAATTGTGCCCAGTCCTCCACCCCCTGTCCCATTC...ATTGTCAATTTCTAATGTCTTATTATGTGGTGGGATGAGTCCCTTCACTCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAGGAGAGAGATTTGGGTaGGAGGCTTGTCAGAATGCA +
Preference number: 4 (lower is better)
Translates to: STLPQSLYRQCQREPIFEGERFG*EACQNA
Trigger: TGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCC...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGACCCCTCCACGTCTTCTaGTTAAATGAGAGGTGTCAG +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRPLHVF*LNERCQ
Trigger: CTGACACCTCTCATTTAACCAGAAGACGTGGAGGGG...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460129.5
ENST00000646379.1
CDS-3UTR TCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGATCCCGCCCCTTGCCTTaGAGTGAAAAAGAGTTCAAA +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRSRPLP*SEKEFK
Trigger: TTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGA...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAAACCTTTTCTCACCTGTaGTACTGTAGGGTTTCAGAA +
Preference number: 4 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKTFSHL*YCRVSE
Trigger: TTCTGAAACCCTACAGTATCACAGGTGAGAAAAGGT...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp AGAAGAGTGAAGGGACTCATCCCACCACATAATAAGACATTAGAAATTGACAATGGTGGCTCTTGGCTATaGAAATCACCACCAATCCTG +
Preference number: 4 (lower is better)
Translates to: RRVKGLIPPHNKTLEIDNGGSWL*KSPPIL
Trigger: CAGGATTGGTGGTGATTTTCATAGCCAAGAGCCACC...ATTGTCAATTTCTAATGTCTTATTATGTGGTGGGATGAGTCCCTTCACTCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360273.7
ENST00000397077.6
CDS-3UTR GCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACACCTGTTGTTTGGCTTTaGTCTGGCTGGCGTCCACAT +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTPVVWL*SGWRPH
Trigger: ATGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGG...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACATCTCAGAAGCCCCCTTaGTGTACATGCGGAAGCTCT +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTSQKPP*CTCGSS
Trigger: AGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGA...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTACCTTTAACCAGGGTATaGTTGTCCGTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLPLTRV*LSVGEE
Trigger: CTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGG...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACACCTTTAACCAGGGTATaGTTGTCCGTTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTPLTRV*LSVGEE
Trigger: CTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGG...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAATCCACTGGTCCAGCTaGAGTGGAGAGCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTIHWSS*SGEQLN
Trigger: ATTCAGCTGCTCTCCACTGCAGCTGGACCAGTGGAT...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAATCCACTGGTCCAGCTaGAGTGGAGAGCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTIHWSS*SGEQLN
Trigger: ATTCAGCTGCTCTCCACTGCAGCTGGACCAGTGGAT...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAATCCACTGGTCCAGCTaGAGTGGAGAGCAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLIHWSS*SGEQLN
Trigger: ATTCAGCTGCTCTCCACTGCAGCTGGACCAGTGGAT...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACACCGATTGTTGCTCGTTaGTGCTTGGGTGAGTTGGGT +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTPIVAR*CLGELG
Trigger: ACCCAACTCACCCAAGCAGCAACGAGCAACAATCGG...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAGGAAACAAGGCAACATaGCGGCAAAGAAACTTTATA +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWIGNKAT*RQRNFI
Trigger: TATAAAGTTTCTTTGCCGGCATGTTGCCTTGTTTCC...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAGTCTTCGAGCAGTaGTTTGCAGATCCTGGCATC +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRKVFEQ*FADPGI
Trigger: GATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTT...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATTCACCCCTTTGGTTATaGAGTTCCTCTCCTGGATAC +
Preference number: 4 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYSPLWL*SSSPGY
Trigger: GTATCCAGGAGAGGAACTGCATAACCAAAGGGGTGA...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAACCATGTTCCAAGGCTaGCCCATGTTTTACACGTGC +
Preference number: 4 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLTMFQG*PMFYTC
Trigger: GCACGTGTAAAACATGGGGCAGCCTTGGAACATGGT...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGACTCTCAAGATCAGGATaGCCTTTTTGTCCCTCTTTA +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGLSRSG*PFCPSL
Trigger: TAAAGAGGGACAAAAAGGGCATCCTGATCTTGAGAG...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATCACCATATTTGACCTaGGCTATGTCCCCAACCACG +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLSPYLT*AMSPTT
Trigger: CGTGGTTGGGGACATAGCCCAGGTCAAATATGGTGA...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATCAATGAGGGGGATGTaGGGCTGGGAATCTTCGATC +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTSMRGM*GWESSI
Trigger: GATCGAAGATTCCCAGCCCCACATCCCCCTCATTGA...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGCACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: EEWILQERRKVFGFPRSMHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGGGACATCATCGATCATaGTATTCAAAATGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSGHHRS*YSKCLL
Trigger: CAAAAGACATTTTGAATACCATGATCGATGATGTCC...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTAGGTCAGCATGAGGAATaGATTTTGCAAGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLGQHEE*ILQERR
Trigger: CCGCCTCTCTTGCAAAATCCATTCCTCATGCTGACC...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AGAAGAGTGAAGGGACTCATCCCACCACATAATAAGACATTAGAAATTGACAATGGCTCTTTTCCCGAGTaGCTCTCATCTTGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: RRVKGLIPPHNKTLEIDNGSFPE*LSSCLW
Trigger: CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCC...ATTGTCAATTTCTAATGTCTTATTATGTGGTGGGATGAGTCCCTTCACTCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAGGCTGGTCACCCCTTTaGTTATGCAGTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTGWSPL*LCSSSP
Trigger: AGGAGAGGAACTGCATAACCAAAGGGGTGACCAGCC...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAATGGTGGCGTTTGTACTaGAATCCAATAAGCACATCT +
Preference number: 4 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKWWRLY*NPISTS
Trigger: AGATGTGCTTATTGGATTCCAGTACAAACGCCACCA...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAAGTGGCTTCCAACAACTaGAGGACCCAGGACAAGACA +
Preference number: 4 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKVASNN*RTQDKT
Trigger: TGTCTTGTCCTGGGTCCTCCAGTTGTTGGAAGCCAC...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAGGTTGGGGAAAAGAGTaGCTTCCAACAACTGGAGGA +
Preference number: 4 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLGWGKE*LPTTGG
Trigger: TCCTCCAGTTGTTGGAAGCCACTCTTTTCCCCAACC...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGTTAAAATTGTATGGCTaGTGCCAGATGAGACACCCA +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVLKLYG*CQMRHP
Trigger: TGGGTGTCTCATCTGGCACCAGCCATACAATTTTAA...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCATAGTTAAAATTGTATaGCTGGTGCCAGATGAGACA +
Preference number: 4 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCIVKIV*LVPDET
Trigger: TGTCTCATCTGGCACCAGCCATACAATTTTAACTAT...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 4 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 4 (lower is better)
Translates to: KLKRVSLREKSSSSALQIKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGATTAATCTATACAACTaGGACCATGCTGTGCAAGCA +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVINLYN*DHAVQA
Trigger: TGCTTGCACAGCATGGTCTCAGTTGTATAGATTAAT...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACATCAAGCGAGTTTCATTaGGAGAAAAGTCTTCGAGCA +
Preference number: 4 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTSSEFH*EKSLRA
Trigger: TGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGA...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATTCACGACATTCAGGTaGTGCGCTCTTGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTFTTFR*CALEGP
Trigger: AGGACCTTCAAGAGCGCATCACCTGAATGTCGTGAA...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCTACTACAGTGAGTTTTaGCAAACCAACCATTTCGTG +
Preference number: 4 (lower is better)
Translates to: KLKRVSLREKSSSSALQIYYSEF*QTNHFV
Trigger: CACGAAATGGTTGGTTTGTCAAAACTCACTGTAGTA...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAGTAAATTTCTGTTCCTaGTCGATGCGGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTVNFCS*SMRLCR
Trigger: CCTGCAGAGCCGCATCGAGCAGGAACAGAAATTTAC...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000643662.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAGGCTTCCCTCCAAACTaGACGATCACTATCTGGATG +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTGFPPN*TITIWM
Trigger: CATCCAGATAGTGATCGTGCAGTTTGGAGGGAAGCC...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCCCATGTTTTACACGTaGAGATCTTTCCTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCPMFYT*RSFLPC
Trigger: ACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGG...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAACGTTGACGGTGAGCTaGAACTGCAAGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKTLTVS*NCKNLE
Trigger: CTCCAAATTCTTGCAGTTCCAGCTCACCGTCAACGT...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAACGTTGACGGTGAGCTaGAACTGCAAGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKTLTVS*NCKNLE
Trigger: CTCCAAATTCTTGCAGTTCCAGCTCACCGTCAACGT...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTTGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAGAAAGGGTCTGTGGGTaGAAACGTTGGTTTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKERVCG*KRWFSL
Trigger: GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTC...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATACACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LRPCCASISKTHRPVDWIHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCACACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RKVFGFPRSMGHHRSWYSHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...TGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAATTAAACCCCTCAGGATaGCAACTCGGTAGCATTTGG +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKLNPSG*QLGSIW
Trigger: CCAAATGCTACCGAGTTGCCATCCTGAGGGGTTTAA...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGGACATCATCGATCATaGTATTCAAAATGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLGHHRS*YSKCLL
Trigger: CAAAAGACATTTTGAATACCATGATCGATGATGTCC...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAGCTATCCTGATGTCATaGAACGAGGTCACGGACACA +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLAILMS*NEVTDT
Trigger: TGTGTCCGTGACCTCGTTCCATGACATCAGGATAGC...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAAGCTATCCTGATGTCATaGAACGAGGTCACGGACACA +
Preference number: 4 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKAILMS*NEVTDT
Trigger: TGTGTCCGTGACCTCGTTCCATGACATCAGGATAGC...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCAGTAAAAGTCGCTGTTaGTCATGTCACCCATGTTTG +
Preference number: 4 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVSKSRC*SCHPCL
Trigger: CAAACATGGGTGACATGACCAACAGCGACTTTTACT...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR TCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAGCTCTCCTAACCCAATaGATATGCACCACATCCACT +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLALLTQ*ICTTST
Trigger: AGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGC...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAATTCAGGATGAGCCATaGAGTTATGGATGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKIQDEP*SYGWRF
Trigger: GAACCTCCATCCATAACTTCATGGCTCATCCTGAAT...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAATCCGGAATTCAGGATaGGCCATGAAGTTATGGATG +
Preference number: 4 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLIRNSG*AMKLWM
Trigger: CATCCATAACTTCATGGCTCATCCTGAATTCCGGAT...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTACCTTGTGAGTGTCTATaGAGTTCTTCGGTTCCATTG +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLPCECL*SSSVPL
Trigger: CAATGGAACCGAAGAACTTCATAGACACTCACAAGG...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR TCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAAGCAGCAAGCCATACTaGTCCTCATCCAATATGCCA +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTSSKPY*SSSNMP
Trigger: TGGCATATTGGATGAGGATCAGTATGGCTTGCTGCT...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAAAAAGAAAGCTCCGCCTaGGTTGCAAGAAGGAAACTC +
Preference number: 4 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKKESSA*VARRKL
Trigger: GAGTTTCCTTCTTGCAACTCAGGCGGAGCTTTCTTT...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATCTCTGTACAGACAGTaGCAAAGAGAACCTATTTTT +
Preference number: 4 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGSLYRQ*QREPIF
Trigger: AAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGA...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAGATCCTCATCCAATATaGCAACAGCTCAGATGCTGC +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTDPHPI*QQLRCC
Trigger: GCAGCATCTGAGCTGTTGGCATATTGGATGAGGATC...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAACGTTGACGGTGAGCTaGAACTGCAAGAATTTGGAG +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLTLTVS*NCKNLE
Trigger: CTCCAAATTCTTGCAGTTCCAGCTCACCGTCAACGT...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAACAGAGAAAGGGTCTGTaGGTGGAAACGTTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKQRKGL*VETLVF
Trigger: GAAAACCAACGTTTCCACCCACAGACCCTTTCTCTG...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAGTTCTTCGGTTCCATTaGTGCAAATCTACTAGGCGA +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKVLRFH*CKSTRR
Trigger: TCGCCTAGTAGATTTGCACCAATGGAACCGAAGAAC...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGATCTACCTATCTATATaGACGTATACAGTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: SIQLRPCCASISKTHRPVIYLSI*TYTVSE
Trigger: TTCCGAGACTGTATACGTCCATATAGATAGGTAGAT...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAGAATGGCTTTCTGTTTaGGAAAGCAAGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLREWLSV*ESKTCC
Trigger: ACAGCAAGTCTTGCTTTCCCAAACAGAAAGCCATTC...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: CASISKTHRPVDWINSLRTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR GCA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCATACAACTGAGACCATaGTGTGCAAGCATTTCAAAA +
Preference number: 4 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVIQLRP*CASISK
Trigger: TTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTAT...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAACTTCGGTTCCATTGGTaGAAATCTACTAGGCGAGTT +
Preference number: 4 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKLRFHW*KSTRRV
Trigger: AACTCGCCTAGTAGATTTGCACCAATGGAACCGAAG...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATGTGGGTGGAAACGTTaGTTTTCTCTCCAGTATTTG +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLCGWKR*FSLQYL
Trigger: CAAATACTGGAGAGAAAACCAACGTTTCCACCCACA...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCCACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATGTAGGGTTTCAGAATaGCTTTCTGTTTGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLCRVSE*LSVWES
Trigger: GCTTTCCCAAACAGAAAGCCATTCTGAAACCCTACA...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAAGTTTTCCTCGAAGCATaGGACATCATCGATCATGGT +
Preference number: 4 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKVFLEA*DIIDHG
Trigger: ACCATGATCGATGATGTCCCATGCTTCGAGGAAAAC...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAGTTTTCCTCGAAGCATaGGACATCATCGATCATGGT +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTVFLEA*DIIDHG
Trigger: ACCATGATCGATGATGTCCCATGCTTCGAGGAAAAC...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAATGGTGGCGTTTGTACTaGAATCCAATAAGCACATCT +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKWWRLY*NPISTS
Trigger: AGATGTGCTTATTGGATTCCAGTACAAACGCCACCA...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGATTAAAATTGTATGGCTaGTGCCAGATGAGACACCCA +
Preference number: 4 (lower is better)
Translates to: VFIASQPPVFLNHTNSQRLKLYG*CQMRHP
Trigger: TGGGTGTCTCATCTGGCACCAGCCATACAATTTTAA...TCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGGATATAACCTTGTaGGTGTCTATGAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: STLPQSLYRQCQREPIFEMDITL*VSMKFF
Trigger: GAAGAACTTCATAGACACTCACAAGGTTATATCCAT...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR TCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAAAGAAGCTATGTGGATaGTGCAGTCCCAAAGTAGAA +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTKKLCG*CSPKVE
Trigger: TTCTACTTTGGGACTGCATCATCCACATAGCTTCTT...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR GCA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAACTGAGACCATGCTGTaGAAGCATTTCAAAAACTCA +
Preference number: 4 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLTETML*KHFKNS
Trigger: TGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGT...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR GCA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATTCTCTGTACAGACAGTaGCAAAGAGAACCTATTTTT +
Preference number: 4 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYSLYRQ*QREPIF
Trigger: AAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGA...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAAGTAAAAGTCGCTGTTaGTCATGTCACCCATGTTTG +
Preference number: 4 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTSKSRC*SCHPCL
Trigger: CAAACATGGGTGACATGACCAACAGCGACTTTTACT...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAAGTAAAAGTCGCTGTTaGTCATGTCACCCATGTTTG +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTSKSRC*SCHPCL
Trigger: CAAACATGGGTGACATGACCAACAGCGACTTTTACT...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAAGAAAAGAAGCTATGTaGATGATGCAGTCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKRKEAM*MMQSQS
Trigger: ACTTTGGGACTGCATCATCCACATAGCTTCTTTTCT...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAAAAACAAGGGGAGGATTaGAAGTGTACAGTACATTCA +
Preference number: 4 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKKQGED*KCTVHS
Trigger: TGAATGTACTGTACACTTTCAATCCTCCCCTTGTTT...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CCA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAATCTACCTATCTATATaGACGTATACAGTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: ASISKTHRPVDWINSLRKIYLSI*TYTVSE
Trigger: TTCCGAGACTGTATACGTCCATATAGATAGGTAGAT...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAAGAAAAGAAGCTATGTaGATGATGCAGTCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTRKEAM*MMQSQS
Trigger: ACTTTGGGACTGCATCATCCACATAGCTTCTTTTCT...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp AGAAGAGTGAAGGGACTCATCCCACCACATAATAAGACATTAGAAATTGACAATATAGTTAAAATTGTATaGCTGGTGCCAGATGAGACA +
Preference number: 4 (lower is better)
Translates to: RRVKGLIPPHNKTLEIDNIVKIV*LVPDET
Trigger: TGTCTCATCTGGCACCAGCCATACAATTTTAACTAT...ATTGTCAATTTCTAATGTCTTATTATGTGGTGGGATGAGTCCCTTCACTCTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR TCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTACTTTATGTACTACAGTaGGTTTTGACAAACCAACCA +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLLYVLQ*VLTNQP
Trigger: TGGTTGGTTTGTCAAAACTCACTGTAGTACATAAAG...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CCA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACACACAGACCAGTGGATTaGATAAATAGTCTCAGAAAA +
Preference number: 4 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTHRPVD*INSLRK
Trigger: TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTG...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAATCTACCTATCTATATaGACGTATACAGTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLIYLSI*TYTVSE
Trigger: TTCCGAGACTGTATACGTCCATATAGATAGGTAGAT...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CCA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAAGGACATCATCGATCATaGTATTCAAAATGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKGHHRS*YSKCLL
Trigger: CAAAAGACATTTTGAATACCATGATCGATGATGTCC...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGGTCGCACATCCTTCGTaGCCCTCGCCGGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRVAHPS*PSPGGW
Trigger: CCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGAC...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGAGTGCAGGCCCGTCGTaGGTCCCGTCCCCCGTCACG +
Preference number: 5 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRSAGPS*VPSPVT
Trigger: CGTGACGGGGGACGGGACCAACGACGGGCCTGCACT...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCAGTGCAGGCCCGTCGTaGGTCCCGTCCCCCGTCACG +
Preference number: 5 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGSAGPS*VPSPVT
Trigger: CGTGACGGGGGACGGGACCAACGACGGGCCTGCACT...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCCCTGCCCGCTGGCACTaGCGGATGGCTTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: MRAGGQARGSSAKATSPGPARWH*RMASGT
Trigger: GGTCCCAGAAGCCATCCGCAAGTGCCAGCGGGCAGG...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGGTATGCTTGTCCGTaGGGGAGGAGCGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGGYACP*GRSEPA
Trigger: TGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCC...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTAGTGCAGGCCCGTCGTaGGTCCCGTCCCCCGTCACG +
Preference number: 5 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACSAGPS*VPSPVT
Trigger: CGTGACGGGGGACGGGACCAACGACGGGCCTGCACT...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS CCA 90 bp GGGCTGGTGACAGTGGTGGTGAGCTCCAAGAGGTGTCCTCCGGTGTaGGACGAGGTCCAGGGGCCGGAGGGGCTCAGGGCTGTAGACCCA +
Preference number: 5 (lower is better)
Translates to: GLVTVVVSSKRCPPV*DEVQGPEGLRAVDP
Trigger: TGGGTCTACAGCCCTGAGCCCCTCCGGCCCCTGGACCTCGTCCCACACCGGAGGACACCTCTTGGAGCTCACCACCACTGTCACCAGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCAGCGGAGCTCCTCCATaGTGCACCCGAACTCGCCCC +
Preference number: 5 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVSGAPP*CTRTRP
Trigger: GGGGCGAGTTCGGGTGCACAATGGAGGAGCTCCGCT...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGCCCACGTCGGCCTTCTaGAGTGCAGGCCCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEPTSAF*SAGPSL
Trigger: CAACGACGGGCCTGCACTCAAGAAGGCCGACGTGGG...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 5 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS TCA 90 bp CTCGGGCTGGGCCCAAGGGTCAGCGCTGGACAAGAGGCTGCCGGGTaGTGGCTGCTTGTGGCTGTCCTCAGCACACCCTCACTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: LGLGPRVSAGQEAAG*WLLVAVLSTPSLVS
Trigger: GCTGACCAGTGAGGGTGTGCTGAGGACAGCCACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGGCCCAGCCCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAAGCGGAGCTCCTCCATaGTGCACCCGAACTCGCCCC +
Preference number: 5 (lower is better)
Translates to: SMRAGGQARGSSAKATSPSGAPP*CTRTRP
Trigger: GGGGCGAGTTCGGGTGCACAATGGAGGAGCTCCGCT...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGAGCCACGGCTTCTTGTaGACCACGAAGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRSHGFL*TTKVST
Trigger: TGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGCT...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGCAGCCACGGCTTCTaGTTGACCACGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGGSHGF*LTTKVS
Trigger: GGACACCTTCGTGGTCAACAAGAAGCCGTGGCTGCC...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGATCTCAGAAGCCCCCTaGCTGTACATGCGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRISEAP*LYMRKL
Trigger: GAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGAT...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGATCTCCCCCTTCTCGTaGCGGATCCTCCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRISPFS*RILLLN
Trigger: GTTCAACAGGAGGATCCGCAACGAGAAGGGGGAGAT...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGATGTCTGAGGCCTCCTaGGCCACGTCAGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEMSEAS*ATSVPA
Trigger: CGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACAT...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGTCAACAGGTGAGGTTTaGAGGCGCCGGCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRSTGEV*RRRQMA
Trigger: AGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGA...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCAGCCACGGCTTCTTGTaGACCACGAAGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGSHGFL*TTKVST
Trigger: TGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGCT...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGAGCAGCTCCATGGTCTaGGTGTTGATGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRSSSMV*VLMELG
Trigger: CCCCAGCTCCATCAACACCAAGACCATGGAGCTGCT...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGTTGATGGCGATGGCATaGATCAGCAGCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRLMAMA*ISSSMV
Trigger: GACCATGGAGCTGCTGATCAATGCCATCGCCATCAA...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGGCTCTCCCGCCCCATaGAGGATTTTGCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRGSPAP*RILQHF
Trigger: GAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGCC...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGTGGATGATGCCACACTaGATGGCGATGGCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEWMMPH*MAMARA
Trigger: GGCTCGGGCCATCGCCATCAAGTGTGGCATCATCCA...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTATGTCTGAGGCCTCCTaGGCCACGTCAGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACMSEAS*ATSVPA
Trigger: CGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACAT...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS GCA 90 bp TGGGCCCAAGGGTCAGCGCTGGACAAGAGGCTGCCGGGTGATGGCTaGTTGTGGCTGTCCTCAGCACACCCTCACTGGTCAGCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: WAQGSALDKRLPGDG*LWLSSAHPHWSAVA
Trigger: TGCCACAGCTGACCAGTGAGGGTGTGCTGAGGACAGCCACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS GCA 90 bp CTGGGCATGGTGAGAACTGGGCACGGTGGAGGGTCTAACTCGTCCTaGATGAGCCTGGCCCGTGGCTGGCCCTCGGTTCTCCTGGGGTTA +
Preference number: 5 (lower is better)
Translates to: LGMVRTGHGGGSNSS*MSLARGWPSVLLGL
Trigger: TAACCCCAGGAGAACCGAGGGCCAGCCACGGGCCAGGCTCATGCAGGACGAGTTAGACCCTCCACCGTGCCCAGTTCTCACCATGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467702.3
CDS CCA 90 bp CAAGGGTCAGCGCTGGACAAGAGGCTGCCGGGTGATGGCTGCTTGTaGCTGTCCTCAGCACACCCTCACTGGTCAGCTGTGGCACCAGGC +
Preference number: 5 (lower is better)
Translates to: QGSALDKRLPGDGCL*LSSAHPHWSAVAPG
Trigger: GCCTGGTGCCACAGCTGACCAGTGAGGGTGTGCTGAGGACAGCCACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS CCA 90 bp ATGTTTGCTGCGGTCCTTGCTCGGGCTGGGCCCAAGGGTCAGCGCTaGACAAGAGGCTGCCGGGTGATGGCTGCTTGTGGCTGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: MFAAVLARAGPKGQR*TRGCRVMAACGCPQ
Trigger: CTGAGGACAGCCACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS CCA 90 bp GCTGTTGGTCATGTCACCCATGTTTGCTGCGGTCCTTGCTCGGGCTaGGCCCAAGGGTCAGCGCTGGACAAGAGGCTGCCGGGTGATGGC +
Preference number: 5 (lower is better)
Translates to: AVGHVTHVCCGPCSG*AQGSALDKRLPGDG
Trigger: GCCATCACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGACATGACCAACAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCAGTCGCACATCCTTCGTaGCCCTCGCCGGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAAVAHPS*PSPGGW
Trigger: CCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGAC...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCAGCCACGGCTTCTaGTTGACCACGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: GGQARGSSAKATSPGCGWGSHGF*LTTKVS
Trigger: GGACACCTTCGTGGTCAACAAGAAGCCGTGGCTGCC...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGAGGATGTCATTCTCATaGTCCCAGTCCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: WVPGWMGARKAGGSGVHERMSFS*SQSGSG
Trigger: CCCGGAGCCGGACTGGGACAATGAGAATGACATCCT...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCCCACGTCGGCCTTCTaGAGTGCAGGCCCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLPTSAF*SAGPSL
Trigger: CAACGACGGGCCTGCACTCAAGAAGGCCGACGTGGG...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCAGCCTGCCTGCCTCCTaGAGGAACTTGAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVSLPAS*RNLSLL
Trigger: CAGCAGACTCAAGTTCCTCAAGGAGGCAGGCAGGCT...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 5 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCAGCAGTGGGCTGGCTTaGGTGGCGTTTGTACTGGAA +
Preference number: 5 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGSSGLA*VAFVLE
Trigger: TTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCT...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTCATGTCACCCATGTTaGCTGCGGTCCTTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: MRAGGQARGSSAKATSPGSCHPC*LRSLLG
Trigger: CCCGAGCAAGGACCGCAGCAAACATGGGTGACATGA...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GGGTCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCACTATCTGCAGCATTaGAAGCTGCCGCACCGTCTG +
Preference number: 5 (lower is better)
Translates to: GSMRAGGQARGSSAKATSHYLQH*KLPHRL
Trigger: CAGACGGTGCGGCAGCTTCAAATGCTGCAGATAGTG...AGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000352432.9
CDS-3UTR CAA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCATCTCCCCCTTCTCGTaGCGGATCCTCCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVISPFS*RILLLN
Trigger: GTTCAACAGGAGGATCCGCAACGAGAAGGGGGAGAT...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCAGCTTTGGCCAGATCTaGTCAATTCGCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LDGWVPGKRVAAGSMRAGSFGQI*SIRSCS
Trigger: TGAGCAGGAGCGAATTGACAAGATCTGGCCAAAGCT...GCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGGGTATGCTTGTCCGTaGGGGAGGAGCGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLGYACP*GRSEPA
Trigger: TGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCC...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTATGTCTGAGGCCTCCTaGGCCACGTCAGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFMSEAS*ATSVPA
Trigger: CGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACAT...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTGCCTCCTTGAGGAACTaGAGTCTGCTGGTCGGGATG +
Preference number: 5 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACASLRN*SLLVGM
Trigger: CATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGC...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTAGCCTGCCTGCCTCCTaGAGGAACTTGAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACSLPAS*RNLSLL
Trigger: CAGCAGACTCAAGTTCCTCAAGGAGGCAGGCAGGCT...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGTCCTCCACGTCCTCGTaGAGCTCCTCCTCCGGGATC +
Preference number: 5 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLSSTSS*SSSSGI
Trigger: GATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGGA...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCCTAGGGCTAGAGAGATaGGCTACATCCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: MRAGGQARGSSAKATSPGLGLER*ATSWLW
Trigger: CCAGAGCCAGGATGTAGCCAATCTCTCTAGCCCTAG...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GAGTGGGCTAGGGGAGTGAGGGTTCCGAGAAGGCCCAGGCAAGAACTGCCTGCAACTGGGGCCCATGTCTaGCTGGCTCTAGGGACTGGG +
Preference number: 5 (lower is better)
Translates to: EWARGVRVPRRPRQELPATGAHV*LALGTG
Trigger: CCCAGTCCCTAGAGCCAGCAAGACATGGGCCCCAGT...TGCAGGCAGTTCTTGCCTGGGCCTTCTCGGAACCCTCACTCCCCTAGCCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS GCA 90 bp GGGCTCAGGGCTGTAGACCCAGGAGTCTCCATTCAGTGGGGCCCATaGTGCTCCCTGGAACTGGCATCTACATGGTCAGGGGTGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GLRAVDPGVSIQWGP*CSLELASTWSGVVA
Trigger: AGCCACCACCCCTGACCATGTAGATGCCAGTTCCAGGGAGCAGCATGGGCCCCACTGAATGGAGACTCCTGGGTCTACAGCCCTGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000646379.1
CDS GCA 90 bp CTCAGGGCTGTAGACCCAGGAGTCTCCATTCAGTGGGGCCCATGCTaGTCCCTGGAACTGGCATCTACATGGTCAGGGGTGGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LRAVDPGVSIQWGPC*SLELASTWSGVVAP
Trigger: GGGAGCCACCACCCCTGACCATGTAGATGCCAGTTCCAGGGAGCAGCATGGGCCCCACTGAATGGAGACTCCTGGGTCTACAGCCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460129.5
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGTCGCACATCCTTCGTaGCCCTCGCCGGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: VSVVRLIPLSMALLFLLRVAHPS*PSPGGW
Trigger: CCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGAC...CCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCAGGAGGTCACCATATTaGACCTGGGCTATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: MRAGGQARGSSAKATSPGRRSPY*TWAMSP
Trigger: TGGGGACATAGCCCAGGTCAAATATGGTGACCTCCT...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGGGCTGCCCCGTCCTGTaGTTTGGCTTTGCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLGCPVL*FGFALA
Trigger: AGCCAGAGCAAAGCCAAACAACAGGACGGGGCAGCC...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000352432.9
ENST00000643662.1
CDS-3UTR CAA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCACGGACTTCTCCTTCTaGTGCATGCTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVTDFSF*CMLAFF
Trigger: GAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGT...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGAGCCACGGCTTCTTGTaGACCACGAAGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: GGQARGSSAKATSPGCGWSHGFL*TTKVST
Trigger: TGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGCT...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGGCAGCCACGGCTTCTaGTTGACCACGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLGSHGF*LTTKVS
Trigger: GGACACCTTCGTGGTCAACAAGAAGCCGTGGCTGCC...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGCCCCATTGAGGATTTaGCAGCACTTCTTGAGCACG +
Preference number: 5 (lower is better)
Translates to: WVPGWMGARKAGGSGVHEAPLRI*QHFLST
Trigger: CGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGC...CTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTCCTGCCCGCTGGCACTaGCGGATGGCTTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSPARWH*RMASGT
Trigger: GGTCCCAGAAGCCATCCGCAAGTGCCAGCGGGCAGG...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGAGCTTTGGCCAGATCTaGTCAATTCGCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: GCLDGWVPGKRVAAGSMRSFGQI*SIRSCS
Trigger: TGAGCAGGAGCGAATTGACAAGATCTGGCCAAAGCT...CCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGTGGGAGCCAGGAAGGGCTTGTTTTGGGAAAACCGCTCACTCCCGTAAGCCCCTCCTCCACGTCCTCGTaGAGCTCCTCCTCCGGGATC +
Preference number: 5 (lower is better)
Translates to: GGSQEGLVLGKPLTPVSPSSTSS*SSSSGI
Trigger: GATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGGA...GGGGCTTACGGGAGTGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCTGGCTCTCATCTTGTTaGTGGAAGAGTTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGWLSSC*WKSSLG
Trigger: GCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCA...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS GCA 90 bp GTAAAAGTCGCTGTTGGTCATGTCACCCATGTTTGCTGCGGTCCTTaGTCGGGCTGGGCCCAAGGGTCAGCGCTGGACAAGAGGCTGCCG +
Preference number: 5 (lower is better)
Translates to: VKVAVGHVTHVCCGP*SGWAQGSALDKRLP
Trigger: CGGCAGCCTCTTGTCCAGCGCTGACCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGACATGACCAACAGCGACTTTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAAGCGGAGCTCCTCCATaGTGCACCCGAACTCGCCCC +
Preference number: 5 (lower is better)
Translates to: ALQILASLGRMAVSVANPSGAPP*CTRTRP
Trigger: GGGGCGAGTTCGGGTGCACAATGGAGGAGCTCCGCT...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGAGGAGGTCACCATATTaGACCTGGGCTATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: GGQARGSSAKATSPGCGWRRSPY*TWAMSP
Trigger: TGGGGACATAGCCCAGGTCAAATATGGTGACCTCCT...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGAGCAGCTCCATGGTCTaGGTGTTGATGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLSSSMV*VLMELG
Trigger: CCCCAGCTCCATCAACACCAAGACCATGGAGCTGCT...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGTTGATGGCGATGGCATaGATCAGCAGCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: GGQARGSSAKATSPGCGWLMAMA*ISSSMV
Trigger: GACCATGGAGCTGCTGATCAATGCCATCGCCATCAA...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GCTGGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTGATGGCGATGGCATaGATCAGCAGCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: AGRVHGWSMSGWEPGRACLMAMA*ISSSMV
Trigger: GACCATGGAGCTGCTGATCAATGCCATCGCCATCAA...ACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 5 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTCATGTCACCCATGTTaGCTGCGGTCCTTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFSCHPC*LRSLLG
Trigger: CCCGAGCAAGGACCGCAGCAAACATGGGTGACATGA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS TCA 90 bp TGTTGTCCTTCATCATTTTCTTCACCGAATAGGCCAACGAGATGGTaGCGGCCAGAGGGAGCCCCTCGGGCACGGCGACCACCAGCACCG +
Preference number: 5 (lower is better)
Translates to: CCPSSFSSPNRPTRW*RPEGAPRARRPPAP
Trigger: CGGTGCTGGTGGTCGCCGTGCCCGAGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCTATTCGGTGAAGAAAATGATGAAGGACAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS GCA 90 bp CTCAGGGCTGTAGACCCAGGAGTCTCCATTCAGTGGGGCCCATGCTaGTCCCTGGAACTGGCATCTACATGGTCAGGGGTGGTGGCTCTT +
Preference number: 5 (lower is better)
Translates to: LRAVDPGVSIQWGPC*SLELASTWSGVVAL
Trigger: AAGAGCCACCACCCCTGACCATGTAGATGCCAGTTCCAGGGAGCAGCATGGGCCCCACTGAATGGAGACTCCTGGGTCTACAGCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000480680.2
ENST00000643662.1
CDS-3UTR CAA 90 bp GGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCGGGCGGGCTCGACTCATTTCTTaGGTTTTTGGAGTAAAAGTC +
Preference number: 5 (lower is better)
Translates to: GWMGARKAGGSGVHEGGRARLIS*VFGVKV
Trigger: GACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGC...CCGCCCGCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGAGCGGAGCTCCTCCATaGTGCACCCGAACTCGCCCC +
Preference number: 5 (lower is better)
Translates to: VSVVRLIPLSMALLFLLRSGAPP*CTRTRP
Trigger: GGGGCGAGTTCGGGTGCACAATGGAGGAGCTCCGCT...CCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCGTCGCACATCCTTCGTaGCCCTCGCCGGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: NSIAARERVCGWKRWFSLVAHPS*PSPGGW
Trigger: CCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGAC...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCGAGCTTTCATCAATCTaGAGGTCATTGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVELSSI*RSLPWM
Trigger: CATCCAGGGCAATGACCTCAAGATTGATGAAAGCTC...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTCCTGTTGTTTGGCTTaGCTCTGGCTGGCGTCCACA +
Preference number: 5 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFSCCLA*LWLAST
Trigger: TGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGGA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGCAGCCACGGCTTCTaGTTGACCACGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNGSHGF*LTTKVS
Trigger: GGACACCTTCGTGGTCAACAAGAAGCCGTGGCTGCC...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCCCTGCCCGCTGGCACTaGCGGATGGCTTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSPARWH*RMASGT
Trigger: GGTCCCAGAAGCCATCCGCAAGTGCCAGCGGGCAGG...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTTAACCAGGGTATGCTaGTCCGTTGGGGAGGAGCGA +
Preference number: 5 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFLTRVC*SVGEER
Trigger: TCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTATGTCTGAGGCCTCCTaGGCCACGTCAGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFMSEAS*ATSVPA
Trigger: CGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACAT...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTATGTCTGAGGCCTCCTaGGCCACGTCAGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: DALLKVLLPGGFCQVGWAMSEAS*ATSVPA
Trigger: CGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACAT...AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCATGTCTGAGGCCTCCTaGGCCACGTCAGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGMSEAS*ATSVPA
Trigger: CGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACAT...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCTCCTCCACGTCCTCGTaGAGCTCCTCCTCCGGGATC +
Preference number: 5 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGSSTSS*SSSSGI
Trigger: GATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGGA...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCACAGATCCTGGCATCCTaGGGCCGGATGGCCGTTAGT +
Preference number: 5 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAAQILAS*GRMAVS
Trigger: ACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTG...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CAA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATCAGATCCTGGCATCCTaGGGCCGGATGGCCGTTAGT +
Preference number: 5 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNQILAS*GRMAVS
Trigger: ACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTG...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS CCA 90 bp CACGGTGGAGGGTCTAACTCGTCCTGCATGAGCCTGGCCCGTGGCTaGCCCTCGGTTCTCCTGGGGTTACTTATTCCTCTGTCCCTTATT +
Preference number: 5 (lower is better)
Translates to: HGGGSNSSCMSLARG*PSVLLGLLIPLSLI
Trigger: AATAAGGGACAGAGGAATAAGTAACCCCAGGAGAACCGAGGGCCAGCCACGGGCCAGGCTCATGCAGGACGAGTTAGACCCTCCACCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467702.3
CDS-3UTR CAA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGAGCGGAGCTCCTCCATaGTGCACCCGAACTCGCCCC +
Preference number: 5 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWSGAPP*CTRTRP
Trigger: GGGGCGAGTTCGGGTGCACAATGGAGGAGCTCCGCT...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATGTCGCACATCCTTCGTaGCCCTCGCCGGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: IAARERVCGWKRWFSLQYVAHPS*PSPGGW
Trigger: CCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGAC...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTGTCGCACATCCTTCGTaGCCCTCGCCGGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: SNSIAARERVCGWKRWFSVAHPS*PSPGGW
Trigger: CCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGAC...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGTGGCTGGCGTCCACATaGCCATCCTGCATTTTACCA +
Preference number: 5 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLWLAST*PSCILP
Trigger: TGGTAAAATGCAGGATGGCAATGTGGACGCCAGCCA...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000352432.9
CDS-3UTR CAA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATACCACTGTCATGCGATaGGTGGTCAGCGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNTTVMR*VVSVPV
Trigger: GACAGGCACGCTGACCACCAATCGCATGACAGTGGT...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCCTGCCCGCTGGCACTaGCGGATGGCTTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: QDATQGKCLLGRAVFIASPARWH*RMASGT
Trigger: GGTCCCAGAAGCCATCCGCAAGTGCCAGCGGGCAGG...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGACCTGCCCGCTGGCACTaGCGGATGGCTTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGPARWH*RMASGT
Trigger: GGTCCCAGAAGCCATCCGCAAGTGCCAGCGGGCAGG...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGAGGGTATGCTTGTCCGTaGGGGAGGAGCGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: VGRQVDPTVDGAVVLVEGGYACP*GRSEPA
Trigger: TGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCC...TCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTAGTGCAGGCCCGTCGTaGGTCCCGTCCCCCGTCACG +
Preference number: 5 (lower is better)
Translates to: SSNSIAARERVCGWKRWFSAGPS*VPSPVT
Trigger: CGTGACGGGGGACGGGACCAACGACGGGCCTGCACT...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTAGTGCAGGCCCGTCGTaGGTCCCGTCCCCCGTCACG +
Preference number: 5 (lower is better)
Translates to: SNSIAARERVCGWKRWFSSAGPS*VPSPVT
Trigger: CGTGACGGGGGACGGGACCAACGACGGGCCTGCACT...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGATGTCTGAGGCCTCCTaGGCCACGTCAGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: VSVVRLIPLSMALLFLLRMSEAS*ATSVPA
Trigger: CGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACAT...CCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGCGTCTACGGAGCATGTaGTTAAACCCCTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLRLRSM*LNPSGW
Trigger: CCATCCTGAGGGGTTTAACAACATGCTCCGTAGACG...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CAA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGTCTTCGAGCAGTGCTTaGCAGATCCTGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLSSSSA*QILASL
Trigger: CAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGA...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTCTTCGAGCAGTGCTTaGCAGATCCTGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFSSSSA*QILASL
Trigger: CAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCTCAAGCGAGTTTCATaGAGAGAAAAGTCTTCGAGC +
Preference number: 5 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVLKRVS*REKSSS
Trigger: GCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAG...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TCCATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCACGAGTGGCTCTCATCTaGTTTGTGGAAGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: SMRAGGQARGSSAKATSPRVALI*FVEEFS
Trigger: AGAGAACTCTTCCACAAACAAGATGAGAGCCACTCG...TGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CAA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTGGGATGGGCTGACTTaGAACCCCAAACCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFWDGLT*NPKPSS
Trigger: ACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGTGGCTTTGGTGGCGTTaGTACTGGAATCCAATAAGC +
Preference number: 5 (lower is better)
Translates to: GGQARGSSAKATSPGCGWWLWWR*YWNPIS
Trigger: GCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CAA 90 bp GTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCCATGAGGGCTTGCTCAGTATAGTGTaGAAAAGGCAGACAAATCCC +
Preference number: 5 (lower is better)
Translates to: VPGWMGARKAGGSGVHEGLLSIV*KRQTNP
Trigger: GGGATTTGTCTGCCTTTTCAACACTATACTGAGCAA...GCCCTCATGGACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS TCA 90 bp TCCTGGCTCTGGCTGGTGACCGAGGACTGTCTCCGCAGGGCCCCCTaGAAGGAGGCCCCGCTCTTGAAAGTATTGACTACTTCAATCTGT +
Preference number: 5 (lower is better)
Translates to: SWLWLVTEDCLRRAP*KEAPLLKVLTTSIC
Trigger: ACAGATTGAAGTAGTCAATACTTTCAAGAGCGGGGCCTCCTTTCAGGGGGCCCTGCGGAGACAGTCCTCGGTCACCAGCCAGAGCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS TCA 90 bp GGCAGCCAATCCTGGACTGGCCCCAAACGAGCTCTCCTAACCCAATaGATATGCACCACATCCACTGGTCCAGCTGCAGTGGAGAGCAGC +
Preference number: 5 (lower is better)
Translates to: GSQSWTGPKRALLTQ*ICTTSTGPAAVESS
Trigger: GCTGCTCTCCACTGCAGCTGGACCAGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGCTCGTTTGGGGCCAGTCCAGGATTGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467702.3
CDS CCA 90 bp CTCCTTGCCCTAGGAGTCGTCAGAACCAGGAATCTGCAGGGGAAGTaGGAGCAGGAGGTGCCTTATCTGTCTAGCAAGGTACGGCGTCCA +
Preference number: 5 (lower is better)
Translates to: LLALGVVRTRNLQGK*EQEVPYLSSKVRRP
Trigger: TGGACGCCGTACCTTGCTAGACAGATAAGGCACCTCCTGCTCCCACTTCCCCTGCAGATTCCTGGTTCTGACGACTCCTAGGGCAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468426.1
CDS-3UTR CAA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCAGCGGAGCTCCTCCATaGTGCACCCGAACTCGCCCC +
Preference number: 5 (lower is better)
Translates to: NSIAARERVCGWKRWFSLSGAPP*CTRTRP
Trigger: GGGGCGAGTTCGGGTGCACAATGGAGGAGCTCCGCT...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTCGCACATCCTTCGTaGCCCTCGCCGGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWVAHPS*PSPGGW
Trigger: CCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGAC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGCCAGCTTGGTGAGCTaGCCCTGCAGCACGGACTTC +
Preference number: 5 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAASLVS*PCSTDF
Trigger: GAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGCCAGCTTGGTGAGCTaGCCCTGCAGCACGGACTTC +
Preference number: 5 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPASLVS*PCSTDF
Trigger: GAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGC...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGGGCAGCCACGGCTTCTaGTTGACCACGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWGSHGF*LTTKVS
Trigger: GGACACCTTCGTGGTCAACAAGAAGCCGTGGCTGCC...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAACCACTGTCATGCGATaGGTGGTCAGCGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: ALQILASLGRMAVSVANPTTVMR*VVSVPV
Trigger: GACAGGCACGCTGACCACCAATCGCATGACAGTGGT...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCTCCATGGTCTTGGTGTaGATGGAGCTGGGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSSMVLV*MELGSG
Trigger: CCCCGACCCCAGCTCCATCAACACCAAGACCATGGA...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTTTGCGGATCCTCCTGTaGAACTCCTTGCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFLRILL*NSLPSR
Trigger: CCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCAA...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCTTGCGGATCCTCCTGTaGAACTCCTTGCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGLRILL*NSLPSR
Trigger: CCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCAA...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATTTAACCAGGGTATGCTaGTCCGTTGGGGAGGAGCGA +
Preference number: 5 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNLTRVC*SVGEER
Trigger: TCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAA...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGAGTGCAGGCCCGTCGTaGGTCCCGTCCCCCGTCACG +
Preference number: 5 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSSAGPS*VPSPVT
Trigger: CGTGACGGGGGACGGGACCAACGACGGGCCTGCACT...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTCCCACGTCGGCCTTCTaGAGTGCAGGCCCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFPTSAF*SAGPSL
Trigger: CAACGACGGGCCTGCACTCAAGAAGGCCGACGTGGG...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCCCACGTCGGCCTTCTaGAGTGCAGGCCCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWPTSAF*SAGPSL
Trigger: CAACGACGGGCCTGCACTCAAGAAGGCCGACGTGGG...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 5 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 5 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTAGACCAACGCTAATGTaGGCATTCTTCCATCGCTCC +
Preference number: 5 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFRPTLM*AFFHRS
Trigger: GGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCT...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCATCATGTCACCCATGTTaGCTGCGGTCCTTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: ALQILASLGRMAVSVANPSCHPC*LRSLLG
Trigger: CCCGAGCAAGGACCGCAGCAAACATGGGTGACATGA...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGCTTGGTTTGGAACTTaGAAAAGGCCTGGGGACTTC +
Preference number: 5 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLAWFGT*KRPGDF
Trigger: GAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAGC...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS TCA 90 bp CTCGGTTCTCCTGGGGTTACTTATTCCTCTGTCCCTTATTCCTCCTaGGGTCACTGGACCCTGAAGGCAGCCAATCCTGGACTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: LGSPGVTYSSVPYSS*GHWTLKAANPGLAP
Trigger: TGGGGCCAGTCCAGGATTGGCTGCCTTCAGGGTCCAGTGACCTCAGGAGGAATAAGGGACAGAGGAATAAGTAACCCCAGGAGAACCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467702.3
CDS GCA 90 bp GTTTTTGGAGTAAAAGTCGCTGTTGGTCATGTCACCCATGTTTGCTaGGGTCCTTGCTCGGGCTGGGCCCAAGGGTCAGCGCTGGACAAG +
Preference number: 5 (lower is better)
Translates to: VFGVKVAVGHVTHVC*GPCSGWAQGSALDK
Trigger: CTTGTCCAGCGCTGACCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGACATGACCAACAGCGACTTTTACTCCAAAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS GCA 90 bp TTGGTTTTTGGAGTAAAAGTCGCTGTTGGTCATGTCACCCATGTTTaGTGCGGTCCTTGCTCGGGCTGGGCCCAAGGGTCAGCGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LVFGVKVAVGHVTHV*CGPCSGWAQGSALD
Trigger: GTCCAGCGCTGACCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGACATGACCAACAGCGACTTTTACTCCAAAAACCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGAGTTGGGTGCCTGGATGGATGGGTGCCCGGAAAGCGGGTGGCAGCGGGGTCGCTCGACTCATTTCTTaGGTTTTTGGAGTAAAAGTC +
Preference number: 5 (lower is better)
Translates to: VSWVPGWMGARKAGGSGVARLIS*VFGVKV
Trigger: GACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGC...GACCCCGCTGCCACCCGCTTTCCGGGCACCCATCCATCCAGGCACCCAACTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTAGCGGAGCTCCTCCATaGTGCACCCGAACTCGCCCC +
Preference number: 5 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFSGAPP*CTRTRP
Trigger: GGGGCGAGTTCGGGTGCACAATGGAGGAGCTCCGCT...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATAGCGGAGCTCCTCCATaGTGCACCCGAACTCGCCCC +
Preference number: 5 (lower is better)
Translates to: IAARERVCGWKRWFSLQYSGAPP*CTRTRP
Trigger: GGGGCGAGTTCGGGTGCACAATGGAGGAGCTCCGCT...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCTCAACAGGTGAGGTTTaGAGGCGCCGGCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSSTGEV*RRRQMA
Trigger: AGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGA...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCGTCGCACATCCTTCGTaGCCCTCGCCGGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCVAHPS*PSPGGW
Trigger: CCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGAC...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAGCCAGCTTGGTGAGCTaGCCCTGCAGCACGGACTTC +
Preference number: 5 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGASLVS*PCSTDF
Trigger: GAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGC...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGGCCAGCTTGGTGAGCTaGCCCTGCAGCACGGACTTC +
Preference number: 5 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWASLVS*PCSTDF
Trigger: GAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGC...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGTCCATGGTCTTGGTGTaGATGGAGCTGGGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWSMVLV*MELGSG
Trigger: CCCCGACCCCAGCTCCATCAACACCAAGACCATGGA...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCATCCATGGTCTTGGTGTaGATGGAGCTGGGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPSMVLV*MELGSG
Trigger: CCCCGACCCCAGCTCCATCAACACCAAGACCATGGA...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCATCTCAGAAGCCCCCTaGCTGTACATGCGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGISEAP*LYMRKL
Trigger: GAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGAT...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCATCTCCCCCTTCTCGTaGCGGATCCTCCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: EKSSSSALQILASLGRMAISPFS*RILLLN
Trigger: GTTCAACAGGAGGATCCGCAACGAGAAGGGGGAGAT...GGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCGGGTATGCTTGTCCGTaGGGGAGGAGCGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: NSIAARERVCGWKRWFSLGYACP*GRSEPA
Trigger: TGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCC...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTGGGTATGCTTGTCCGTaGGGGAGGAGCGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTGYACP*GRSEPA
Trigger: TGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCC...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGGGGTATGCTTGTCCGTaGGGGAGGAGCGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPGYACP*GRSEPA
Trigger: TGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCC...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CTCCCTGGACTTGAAGAGGTAGCTGATTTGCTTGTGTCGGTCGTCAGGTTGATCGGGTATGCTTGTCCGTaGGGGAGGAGCGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: LPGLEEVADLLVSVVRLIGYACP*GRSEPA
Trigger: TGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCC...GATCAACCTGACGACCGACACAAGCAAATCAGCTACCTCTTCAAGTCCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAATTAACCAGGGTATGCTaGTCCGTTGGGGAGGAGCGA +
Preference number: 5 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQLTRVC*SVGEER
Trigger: TCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAA...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGAGTGCAGGCCCGTCGTaGGTCCCGTCCCCCGTCACG +
Preference number: 5 (lower is better)
Translates to: EEWILQERRKVFGFPRSMSAGPS*VPSPVT
Trigger: CGTGACGGGGGACGGGACCAACGACGGGCCTGCACT...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCCCACGTCGGCCTTCTaGAGTGCAGGCCCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: SNSIAARERVCGWKRWFSPTSAF*SAGPSL
Trigger: CAACGACGGGCCTGCACTCAAGAAGGCCGACGTGGG...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: GGCMAGPCLGGSQEGLVLVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...CAAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGCGGGTGCATGGCTGGTCCATGTCTGGGTGGGAGCCAGGAAGGGCTTGTTTTGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: GRVHGWSMSGWEPGRACFVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...AAAACAAGCCCTTCCTGGCTCCCACCCAGACATGGACCAGCCATGCACCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGACGGTAGTGACATTATaGAACGGAAATAGCAGGCAA +
Preference number: 5 (lower is better)
Translates to: GGQARGSSAKATSPGCGWTVVTL*NGNSRQ
Trigger: TTGCCTGCTATTTCCGTTCAATAATGTCACTACCGT...CCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CAA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATCGTCTACGGAGCATGTaGTTAAACCCCTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNRLRSM*LNPSGW
Trigger: CCATCCTGAGGGGTTTAACAACATGCTCCGTAGACG...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCCAGATCCTGGCATCCTaGGGCCGGATGGCCGTTAGT +
Preference number: 5 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAQILAS*GRMAVS
Trigger: ACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTG...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGTCAGGTGATGCGCTCTaGAAGGTCCTCCTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: LCRSWHPWAGWPLVLQTQSGDAL*KVLLPG
Trigger: TCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGA...CTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCAGCAGTGGGCTGGCTTaGGTGGCGTTTGTACTGGAA +
Preference number: 5 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGSSGLA*VAFVLE
Trigger: TTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCT...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGCCATGGTGAGGGGTaGGCGGGAGCAATGGAGGCT +
Preference number: 5 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHGHGEG*AGAMEA
Trigger: AGCCTCCATTGCTCCCGCCAACCCCTCACCATGGCC...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp ATGAGGGCGGGCGGGCAGGCGAGAGGGTCCTCAGCTAAAGCGACGTCTCCAGGCCCACGTGTGCATTTATaGTTATTGCTCAGTATAGTG +
Preference number: 5 (lower is better)
Translates to: MRAGGQARGSSAKATSPGPRVHL*LLLSIV
Trigger: CACTATACTGAGCAATAACAATAAATGCACACGTGG...GCCTGGAGACGTCGCTTTAGCTGAGGACCCTCTCGCCTGCCCGCCCGCCCTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS-3UTR CAA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATTGGCTGGCGTCCACATaGCCATCCTGCATTTTACCT +
Preference number: 5 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNWLAST*PSCILP
Trigger: AGGTAAAATGCAGGATGGCAATGTGGACGCCAGCCA...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643662.1
CDS-3UTR CAA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTAGCGGAGCTCCTCCATaGTGCACCCGAACTCGCCCC +
Preference number: 5 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVSGAPP*CTRTRP
Trigger: GGGGCGAGTTCGGGTGCACAATGGAGGAGCTCCGCT...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAAGCTCCGCCTGAGTTGCAAGAAGGAAACTCCTCAGAGCTCTCTCTGCTCACCTCAACAGGTGAGGTTTaGAGGCGCCGGCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: KAPPELQEGNSSELSLLTSTGEV*RRRQMA
Trigger: AGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGA...GGTGAGCAGAGAGAGCTCTGAGGAGTTTCCTTCTTGCAACTCAGGCGGAGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCAGGAGGTCACCATATTaGACCTGGGCTATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGRRSPY*TWAMSP
Trigger: TGGGGACATAGCCCAGGTCAAATATGGTGACCTCCT...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCACTATCTGCAGCATTaGAAGCTGCCGCACCGTCTG +
Preference number: 5 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWHYLQH*KLPHRL
Trigger: CAGACGGTGCGGCAGCTTCAAATGCTGCAGATAGTG...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
CDS-3UTR CAA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGCCAGCTTGGTGAGCTaGCCCTGCAGCACGGACTTC +
Preference number: 5 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFASLVS*PCSTDF
Trigger: GAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCGGCAGCCACGGCTTCTaGTTGACCACGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: NSIAARERVCGWKRWFSLGSHGF*LTTKVS
Trigger: GGACACCTTCGTGGTCAACAAGAAGCCGTGGCTGCC...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGACCACTGTCATGCGATaGGTGGTCAGCGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWTTVMR*VVSVPV
Trigger: GACAGGCACGCTGACCACCAATCGCATGACAGTGGT...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAACCACTGTCATGCGATaGGTGGTCAGCGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPTTVMR*VVSVPV
Trigger: GACAGGCACGCTGACCACCAATCGCATGACAGTGGT...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTCCATGGTCTTGGTGTaGATGGAGCTGGGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYSMVLV*MELGSG
Trigger: CCCCGACCCCAGCTCCATCAACACCAAGACCATGGA...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGTCCATGGTCTTGGTGTaGATGGAGCTGGGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMSMVLV*MELGSG
Trigger: CCCCGACCCCAGCTCCATCAACACCAAGACCATGGA...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGCAGCTCCATGGTCTaGGTGTTGATGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAASSSMV*VLMELG
Trigger: CCCCAGCTCCATCAACACCAAGACCATGGAGCTGCT...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGATCTCAGAAGCCCCCTaGCTGTACATGCGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERISEAP*LYMRKL
Trigger: GAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGAT...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAAGGATGTCATTCTCATaGTCCCAGTCCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPRMSFS*SQSGSG
Trigger: CCCGGAGCCGGACTGGGACAATGAGAATGACATCCT...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGCCTGCCCGCTGGCACTaGCGGATGGCTTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLPARWH*RMASGT
Trigger: GGTCCCAGAAGCCATCCGCAAGTGCCAGCGGGCAGG...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCCTGCCCGCTGGCACTaGCGGATGGCTTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVPARWH*RMASGT
Trigger: GGTCCCAGAAGCCATCCGCAAGTGCCAGCGGGCAGG...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATCCAGGATGCAACCCAGGCCTGCCCGCTGGCACTaGCGGATGGCTTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: SRQKSEHGYHKTSRMQPRPARWH*RMASGT
Trigger: GGTCCCAGAAGCCATCCGCAAGTGCCAGCGGGCAGG...CCTGGGTTGCATCCTGGATGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCCCTGCCCGCTGGCACTaGCGGATGGCTTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCPARWH*RMASGT
Trigger: GGTCCCAGAAGCCATCCGCAAGTGCCAGCGGGCAGG...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTTGGATGATGCCACACTaGATGGCGATGGCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTWMMPH*MAMARA
Trigger: GGCTCGGGCCATCGCCATCAAGTGTGGCATCATCCA...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCATTGCGGATCCTCCTGTaGAACTCCTTGCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPLRILL*NSLPSR
Trigger: CCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCAA...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGTTGCGGATCCTCCTGTaGAACTCCTTGCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWLRILL*NSLPSR
Trigger: CCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCAA...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGGGTATGCTTGTCCGTaGGGGAGGAGCGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMGYACP*GRSEPA
Trigger: TGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCC...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGGGTATGCTTGTCCGTaGGGGAGGAGCGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAGYACP*GRSEPA
Trigger: TGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCC...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAGTGCAGGCCCGTCGTaGGTCCCGTCCCCCGTCACG +
Preference number: 5 (lower is better)
Translates to: LRPCCASISKTHRPVDWISAGPS*VPSPVT
Trigger: CGTGACGGGGGACGGGACCAACGACGGGCCTGCACT...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGCCTCCTTGAGGAACTaGAGTCTGCTGGTCGGGATG +
Preference number: 5 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAASLRN*SLLVGM
Trigger: CATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGAGCCTGCCTGCCTCCTaGAGGAACTTGAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWSLPAS*RNLSLL
Trigger: CAGCAGACTCAAGTTCCTCAAGGAGGCAGGCAGGCT...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTCCTCCACGTCCTCGTaGAGCTCCTCCTCCGGGATC +
Preference number: 5 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWSSTSS*SSSSGI
Trigger: GATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGGA...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAGAGGAAAGAGCATaGGACAACGACACGCGACTA +
Preference number: 5 (lower is better)
Translates to: ALQILASLGRMAVSVANPGEERA*DNDTRL
Trigger: TAGTCGCGTGTCGTTGTCCAATGCTCTTTCCTCTCC...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTCCCTGGACTTGAAGAGGTAGCTGATTTGCTTGTGTCGGTCGTCAGGTTGATCGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LPGLEEVADLLVSVVRLIGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...GATCAACCTGACGACCGACACAAGCAAATCAGCTACCTCTTCAAGTCCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTCTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 5 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAACTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 5 (lower is better)
Translates to: AVLCRSWHPWAGWPLVLQLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...TTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGATCCTGGCATCCTaGGGCCGGATGGCCGTTAGT +
Preference number: 5 (lower is better)
Translates to: QDATQGKCLLGRAVFIASQILAS*GRMAVS
Trigger: ACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTG...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGGTCCTCAGCTAAAGCGACGTCTCCAGGCTGTGGATGGGGCTCCCTGGACTTGCTCAAGCGAGTTTCATaGAGAGAAAAGTCTTCGAGC +
Preference number: 5 (lower is better)
Translates to: GSSAKATSPGCGWGSLDLLKRVS*REKSSS
Trigger: GCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAG...CAAGTCCAGGGAGCCCCATCCACAGCCTGGAGACGTCGCTTTAGCTGAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CAA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGTCAGGTGATGCGCTCTaGAAGGTCCTCCTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWSGDAL*KVLLPG
Trigger: TCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGA...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGGATCAGGTGATGCGCTCTaGAAGGTCCTCCTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: VGRQVDPTVDGAVVLVEGSGDAL*KVLLPG
Trigger: TCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGA...TCCCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CAA 90 bp CCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCTAAGCCAGGCTCCCCCTTCCCTCATCTGTaGAGGGGGAGACAAGTTGGT +
Preference number: 5 (lower is better)
Translates to: PTLMLAFFHRSLFPKPGSPFPHL*RGRQVG
Trigger: ACCAACTTGTCTCCCCCTCAACAGATGAGGGAAGGG...GGAGCCTGGCTTAGGGAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGATCTCTATGCTATGGTaGGGACAAGGGGACAAGGGG +
Preference number: 5 (lower is better)
Translates to: LCRSWHPWAGWPLVLQTQISMLW*GQGDKG
Trigger: CCCCTTGTCCCCTTGTCCCAACCATAGCATAGAGAT...CTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGGACAGAGCCCAGAATTaGGGGGTGGGAATGGGACAG +
Preference number: 5 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWDRAQN*GVGMGQ
Trigger: CTGTCCCATTCCCACCCCCAAATTCTGGGCTCTGTC...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCAGCGGAGCTCCTCCATaGTGCACCCGAACTCGCCCC +
Preference number: 5 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLSGAPP*CTRTRP
Trigger: GGGGCGAGTTCGGGTGCACAATGGAGGAGCTCCGCT...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTTCAACAGGTGAGGTTTaGAGGCGCCGGCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTSTGEV*RRRQMA
Trigger: AGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGA...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAATCAACAGGTGAGGTTTaGAGGCGCCGGCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: PAPCLEVKKSSNSIAARESTGEV*RRRQMA
Trigger: AGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGA...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTCTGCTCACCTCCAAAGATGAGTGATTCTGCAGCGCCAGGAGTCACTGAACGGAGGAGGTCACCATATTaGACCTGGGCTATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: LCSPPKMSDSAAPGVTERRRSPY*TWAMSP
Trigger: TGGGGACATAGCCCAGGTCAAATATGGTGACCTCCT...CCGTTCAGTGACTCCTGGCGCTGCAGAATCACTCATCTTTGGAGGTGAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGTCCTGTTGTTTGGCTTaGCTCTGGCTGGCGTCCACA +
Preference number: 5 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWSCCLA*LWLAST
Trigger: TGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGGA...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGTCGGTCGTCAGGTTGATCCCACTGTCGATGGCGCTGTTGTTCTTGTTGAGGACGGACTTCTCCTTCTaGTGCATGCTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: VSVVRLIPLSMALLFLLRTDFSF*CMLAFF
Trigger: GAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGT...CCTCAACAAGAACAACAGCGCCATCGACAGTGGGATCAACCTGACGACCGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp AGGAGAGCTTGGTTTGGAACTTTGAAAAGGCCTGGGGACTTCCTGCTATTGTCTGCCAGCTTGGTGAGCTaGCCCTGCAGCACGGACTTC +
Preference number: 5 (lower is better)
Translates to: RRAWFGTLKRPGDFLLLSASLVS*PCSTDF
Trigger: GAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGC...AGACAATAGCAGGAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAGCTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATGGCAGCCACGGCTTCTaGTTGACCACGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: IAARERVCGWKRWFSLQYGSHGF*LTTKVS
Trigger: GGACACCTTCGTGGTCAACAAGAAGCCGTGGCTGCC...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGAGCAGCTCCATGGTCTaGGTGTTGATGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWSSSMV*VLMELG
Trigger: CCCCAGCTCCATCAACACCAAGACCATGGAGCTGCT...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CCCCGAGAGGAAAGGTCCAGGAGGGAGAGCACCACAGGCATTACAAAACAGACTGCCCCATTGAGGATTTaGCAGCACTTCTTGAGCACG +
Preference number: 5 (lower is better)
Translates to: PREERSRRESTTGITKQTAPLRI*QHFLST
Trigger: CGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGC...AGTCTGTTTTGTAATGCCTGTGGTGCTCTCCCTCCTGGACCTTTCCTCTCGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATACCTGCCCGCTGGCACTaGCGGATGGCTTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: LRPCCASISKTHRPVDWIPARWH*RMASGT
Trigger: GGTCCCAGAAGCCATCCGCAAGTGCCAGCGGGCAGG...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAATGGATGATGCCACACTaGATGGCGATGGCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: FSRVALILFVEEFSGPGEWMMPH*MAMARA
Trigger: GGCTCGGGCCATCGCCATCAAGTGTGGCATCATCCA...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGGATGATGCCACACTaGATGGCGATGGCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: SSNSIAARERVCGWKRWFWMMPH*MAMARA
Trigger: GGCTCGGGCCATCGCCATCAAGTGTGGCATCATCCA...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCATGGATGATGCCACACTaGATGGCGATGGCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAWMMPH*MAMARA
Trigger: GGCTCGGGCCATCGCCATCAAGTGTGGCATCATCCA...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAATTGCGGATCCTCCTGTaGAACTCCTTGCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: PAPCLEVKKSSNSIAARELRILL*NSLPSR
Trigger: CCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCAA...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCATCTCCCCCTTCTCGTaGCGGATCCTCCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSISPFS*RILLLN
Trigger: GTTCAACAGGAGGATCCGCAACGAGAAGGGGGAGAT...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAATCTCCCCCTTCTCGTaGCGGATCCTCCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPISPFS*RILLLN
Trigger: GTTCAACAGGAGGATCCGCAACGAGAAGGGGGAGAT...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGGAAGCCTTCTCTAGCTTTGGCCAGATCTaGTCAATTCGCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: WHPWAGWPLVLQTQEAFSSFGQI*SIRSCS
Trigger: TGAGCAGGAGCGAATTGACAAGATCTGGCCAAAGCT...AGAGAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCTTAACCAGGGTATGCTaGTCCGTTGGGGAGGAGCGA +
Preference number: 5 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAALTRVC*SVGEER
Trigger: TCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAA...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTAGTGCAGGCCCGTCGTaGGTCCCGTCCCCCGTCACG +
Preference number: 5 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLSAGPS*VPSPVT
Trigger: CGTGACGGGGGACGGGACCAACGACGGGCCTGCACT...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTCCCACGTCGGCCTTCTaGAGTGCAGGCCCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVPTSAF*SAGPSL
Trigger: CAACGACGGGCCTGCACTCAAGAAGGCCGACGTGGG...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCACCCACGTCGGCCTTCTaGAGTGCAGGCCCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: CVQASFIPDKRRPTLMLAPTSAF*SAGPSL
Trigger: CAACGACGGGCCTGCACTCAAGAAGGCCGACGTGGG...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTCCCACGTCGGCCTTCTaGAGTGCAGGCCCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGPTSAF*SAGPSL
Trigger: CAACGACGGGCCTGCACTCAAGAAGGCCGACGTGGG...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGATGTCTGAGGCCTCCTaGGCCACGTCAGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWMSEAS*ATSVPA
Trigger: CGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACAT...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTTAGGGGGCTGAGAAGGGCAGTCCCAAAGCAGCCTCCAATATTGTTTTCAGTGGCCTCCTTGAGGAACTaGAGTCTGCTGGTCGGGATG +
Preference number: 5 (lower is better)
Translates to: LRGLRRAVPKQPPILFSVASLRN*SLLVGM
Trigger: CATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGC...CACTGAAAACAATATTGGAGGCTGCTTTGGGACTGCCCTTCTCAGCCCCCTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCCTCCTTGAGGAACTaGAGTCTGCTGGTCGGGATG +
Preference number: 5 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIASLRN*SLLVGM
Trigger: CATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGC...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTTCCTCCACGTCCTCGTaGAGCTCCTCCTCCGGGATC +
Preference number: 5 (lower is better)
Translates to: EVSVGPSCFYSISATSVLSSTSS*SSSSGI
Trigger: GATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGGA...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGCAGTTCCTCTTCCTCCACGTCCTCGTaGAGCTCCTCCTCCGGGATC +
Preference number: 5 (lower is better)
Translates to: NPISTSEGWSPLWLCSSSSSTSS*SSSSGI
Trigger: GATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGGA...AGAGGAACTGCATAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGCTAGGGCTAGAGAGATaGGCTACATCCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWLGLER*ATSWLW
Trigger: CCAGAGCCAGGATGTAGCCAATCTCTCTAGCCCTAG...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SNSIAARERVCGWKRWFSGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: IAARERVCGWKRWFSLQYALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAAGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: FSRVALILFVEEFSGPGEALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGAGCGCGGCAGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: LLFLLRDDGGLEFCLSAAVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...TGCCGCGCTCAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 5 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMAGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 5 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGCAGGGGAAGTGTCTGTaGGGCCGAGCTGTTTTTATA +
Preference number: 5 (lower is better)
Translates to: LCRSWHPWAGWPLVLQTQQGKCL*GRAVFI
Trigger: TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTG...CTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATGGATTTCAGGGGAAGTGTCTGTaGGGCCGAGCTGTTTTTATA +
Preference number: 5 (lower is better)
Translates to: RGWADTAIVRRVSMRNGFQGKCL*GRAVFI
Trigger: TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTG...AAATCCATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGCAGATCCTGGCATCCTaGGGCCGGATGGCCGTTAGT +
Preference number: 5 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMQILAS*GRMAVS
Trigger: ACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTG...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TCGATGGCGCTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGTGGCTCTCATCTTGTTaGTGGAAGAGTTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: SMALLFLLRDDGGLEFCLWLSSC*WKSSLG
Trigger: GCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCA...CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
CDS-3UTR CAA 90 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTTGGCTCTCATCTTGTTaGTGGAAGAGTTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: DALLKVLLPGGFCQVGWAWLSSC*WKSSLG
Trigger: GCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCA...AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGGGGCTGGTCACCCCTTaGGTTATGCAGTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWGLVTP*VMQFLS
Trigger: GGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCC...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAGGGCTGGTCACCCCTTaGGTTATGCAGTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGGLVTP*VMQFLS
Trigger: GGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCC...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGTCATGTCACCCATGTTaGCTGCGGTCCTTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWSCHPC*LRSLLG
Trigger: CCCGAGCAAGGACCGCAGCAAACATGGGTGACATGA...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATGGCCATGGTGAGGGGTaGGCGGGAGCAATGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHGHGEG*AGAMEA
Trigger: AGCCTCCATTGCTCCCGCCAACCCCTCACCATGGCC...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CGGCTTCAAGGAAGCCAAGAGTCTGGGATTGATTCACATTCATTTCAGGCTCAAGGCCATGGTGAGGGGTaGGCGGGAGCAATGGAGGCT +
Preference number: 5 (lower is better)
Translates to: RLQGSQESGIDSHSFQAQGHGEG*AGAMEA
Trigger: AGCCTCCATTGCTCCCGCCAACCCCTCACCATGGCC...TTGAGCCTGAAATGAATGTGAATCAATCCCAGACTCTTGGCTTCCTTGAAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS-3UTR CAA 90 bp ATTCTGCAGCGCCAGGAGTCACTGAACGGGCTCCCTGCCCTTCCCTCATCTGTTAGGACTGCCTCTCTCTaGTCATCTCTATGCTATGGT +
Preference number: 5 (lower is better)
Translates to: ILQRQESLNGLPALPSSVRTASL*SSLCYG
Trigger: ACCATAGCATAGAGATGACAAGAGAGAGGCAGTCCT...AACAGATGAGGGAAGGGCAGGGAGCCCGTTCAGTGACTCCTGGCGCTGCAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CTCCCTGGACTTGAAGAGGTAGCTGATTTGCTTGTGTCGGTCGTCAGGTTGATCGACAGAGCCCAGAATTaGGGGGTGGGAATGGGACAG +
Preference number: 5 (lower is better)
Translates to: LPGLEEVADLLVSVVRLIDRAQN*GVGMGQ
Trigger: CTGTCCCATTCCCACCCCCAAATTCTGGGCTCTGTC...GATCAACCTGACGACCGACACAAGCAAATCAGCTACCTCTTCAAGTCCAGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS-3UTR CAA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTCAACAGGTGAGGTTTaGAGGCGCCGGCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: IAARERVCGWKRWFSLQYSTGEV*RRRQMA
Trigger: AGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGA...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGGCTGCCCCGTCCTGTaGTTTGGCTTTGCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWGCPVL*FGFALA
Trigger: AGCCAGAGCAAAGCCAAACAACAGGACGGGGCAGCC...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGGCTGCCCCGTCCTGTaGTTTGGCTTTGCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGGCPVL*FGFALA
Trigger: AGCCAGAGCAAAGCCAAACAACAGGACGGGGCAGCC...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGACGGACTTCTCCTTCTaGTGCATGCTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWTDFSF*CMLAFF
Trigger: GAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGT...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATGCCAGCTTGGTGAGCTaGCCCTGCAGCACGGACTTC +
Preference number: 5 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNASLVS*PCSTDF
Trigger: GAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGC...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGTCCATGGTCTTGGTGTaGATGGAGCTGGGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSSMVLV*MELGSG
Trigger: CCCCGACCCCAGCTCCATCAACACCAAGACCATGGA...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTAGCAGCTCCATGGTCTaGGTGTTGATGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SSNSIAARERVCGWKRWFSSSMV*VLMELG
Trigger: CCCCAGCTCCATCAACACCAAGACCATGGAGCTGCT...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAATCTCAGAAGCCCCCTaGCTGTACATGCGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: PAPCLEVKKSSNSIAAREISEAP*LYMRKL
Trigger: GAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGAT...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGCCCCATTGAGGATTTaGCAGCACTTCTTGAGCACG +
Preference number: 5 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWAPLRI*QHFLST
Trigger: CGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGGGCTCTCCCGCCCCATaGAGGATTTTGCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWGSPAP*RILQHF
Trigger: GAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGCC...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTGGCTCTCCCGCCCCATaGAGGATTTTGCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: SSNSIAARERVCGWKRWFGSPAP*RILQHF
Trigger: GAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGCC...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATAGGATGTCATTCTCATaGTCCCAGTCCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: IAARERVCGWKRWFSLQYRMSFS*SQSGSG
Trigger: CCCGGAGCCGGACTGGGACAATGAGAATGACATCCT...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTAGGATGTCATTCTCATaGTCCCAGTCCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: SNSIAARERVCGWKRWFSRMSFS*SQSGSG
Trigger: CCCGGAGCCGGACTGGGACAATGAGAATGACATCCT...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTCCTGCCCGCTGGCACTaGCGGATGGCTTCTGGGACC +
Preference number: 5 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLPARWH*RMASGT
Trigger: GGTCCCAGAAGCCATCCGCAAGTGCCAGCGGGCAGG...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGTGGATGATGCCACACTaGATGGCGATGGCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWWMMPH*MAMARA
Trigger: GGCTCGGGCCATCGCCATCAAGTGTGGCATCATCCA...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCATTGCGGATCCTCCTGTaGAACTCCTTGCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: QGCPMFYTCRSFLPCRRALRILL*NSLPSR
Trigger: CCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCAA...TGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGAACCAAATCTGCCACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGGGTATGCTTGTCCGTaGGGGAGGAGCGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: RTKSATYSWSPCLEDRKEGYACP*GRSEPA
Trigger: TGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCC...TTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGTGGCAGATTTGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTAACCAGGGTATGCTaGTCCGTTGGGGAGGAGCGA +
Preference number: 5 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGLTRVC*SVGEER
Trigger: TCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAA...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGTTAACCAGGGTATGCTaGTCCGTTGGGGAGGAGCGA +
Preference number: 5 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMLTRVC*SVGEER
Trigger: TCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAA...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAATTAACCAGGGTATGCTaGTCCGTTGGGGAGGAGCGA +
Preference number: 5 (lower is better)
Translates to: PAPCLEVKKSSNSIAARELTRVC*SVGEER
Trigger: TCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAA...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTAGTGCAGGCCCGTCGTaGGTCCCGTCCCCCGTCACG +
Preference number: 5 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSSAGPS*VPSPVT
Trigger: CGTGACGGGGGACGGGACCAACGACGGGCCTGCACT...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGCCTCCTTGAGGAACTaGAGTCTGCTGGTCGGGATG +
Preference number: 5 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMASLRN*SLLVGM
Trigger: CATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGC...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGGCCTCCTTGAGGAACTaGAGTCTGCTGGTCGGGATG +
Preference number: 5 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMASLRN*SLLVGM
Trigger: CATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGC...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAAGCCTCCTTGAGGAACTaGAGTCTGCTGGTCGGGATG +
Preference number: 5 (lower is better)
Translates to: VMERGHGHMTDQRSGEMEASLRN*SLLVGM
Trigger: CATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGC...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTGCCTCCTTGAGGAACTaGAGTCTGCTGGTCGGGATG +
Preference number: 5 (lower is better)
Translates to: SNSIAARERVCGWKRWFSASLRN*SLLVGM
Trigger: CATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGC...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGAGCCTGCCTGCCTCCTaGAGGAACTTGAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMSLPAS*RNLSLL
Trigger: CAGCAGACTCAAGTTCCTCAAGGAGGCAGGCAGGCT...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGAGCCTGCCTGCCTCCTaGAGGAACTTGAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMSLPAS*RNLSLL
Trigger: CAGCAGACTCAAGTTCCTCAAGGAGGCAGGCAGGCT...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTAGCCTGCCTGCCTCCTaGAGGAACTTGAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SNSIAARERVCGWKRWFSSLPAS*RNLSLL
Trigger: CAGCAGACTCAAGTTCCTCAAGGAGGCAGGCAGGCT...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCCTCCACGTCCTCGTaGAGCTCCTCCTCCGGGATC +
Preference number: 5 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCSSTSS*SSSSGI
Trigger: GATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGGA...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTCCTCCACGTCCTCGTaGAGCTCCTCCTCCGGGATC +
Preference number: 5 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCSSTSS*SSSSGI
Trigger: GATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGGA...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTTCCTCCACGTCCTCGTaGAGCTCCTCCTCCGGGATC +
Preference number: 5 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGSSTSS*SSSSGI
Trigger: GATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGGA...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAAAGGAGGCCCCGCTCTaGAAAGTATTGACTACTTCA +
Preference number: 5 (lower is better)
Translates to: ALQILASLGRMAVSVANPKEAPL*KVLTTS
Trigger: TGAAGTAGTCAATACTTTCAAGAGCGGGGCCTCCTT...TGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCAAGGAGGCCCCGCTCTaGAAAGTATTGACTACTTCA +
Preference number: 5 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGKEAPL*KVLTTS
Trigger: TGAAGTAGTCAATACTTTCAAGAGCGGGGCCTCCTT...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTCTAGGGCTAGAGAGATaGGCTACATCCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTLGLER*ATSWLW
Trigger: CCAGAGCCAGGATGTAGCCAATCTCTCTAGCCCTAG...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGGAGAGGAAAGAGCATaGGACAACGACACGCGACTA +
Preference number: 5 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPGEERA*DNDTRL
Trigger: TAGTCGCGTGTCGTTGTCCAATGCTCTTTCCTCTCC...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 5 (lower is better)
Translates to: SSNSIAARERVCGWKRWFMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGAGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 5 (lower is better)
Translates to: VFGFRLLLVAAWVSWVPGGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...TCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACGGATGGCCGTTAGTGTaGCAAACCCAGGAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYGWPLV*QTQEAF
Trigger: GAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCC...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGTGTAGGCCCTCCCAGTaGACTATGGCTCTTTTCCCG +
Preference number: 5 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWCRPSQ*TMALFP
Trigger: CGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTACA...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GCCCTCCCAGTTGACTATGGCTCTTTTCCCGAGTGGCTCTCATCTTGTTTGTGGTGGGATGGGCTGACTTaGAACCCCAAACCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: ALPVDYGSFPEWLSSCLWWDGLT*NPKPSS
Trigger: ACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCA...CCACAAACAAGATGAGAGCCACTCGGGAAAAGAGCCATAGTCAACTGGGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTTTGGACACAATGGCAGGAGAGAGATTTGGGTGGGAGGCTTGTCAGAATGCACGGGCTGGTCACCCCTTaGGTTATGCAGTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: FWTQWQERDLGGRLVRMHGLVTP*VMQFLS
Trigger: GGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCC...GTGCATTCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCATTGTGTCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTGGGCTGGTCACCCCTTaGGTTATGCAGTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSGLVTP*VMQFLS
Trigger: GGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCC...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GATGCGCTCTTGAAGGTCCTCCTTCCAGGAGGATTTTGCCAGGTGGGATGGGCTTGGCTTTGGTGGCGTTaGTACTGGAATCCAATAAGC +
Preference number: 5 (lower is better)
Translates to: DALLKVLLPGGFCQVGWAWLWWR*YWNPIS
Trigger: GCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA...AGCCCATCCCACCTGGCAAAATCCTCCTGGAAGGAGGACCTTCAAGAGCGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCTGGCTTTGGTGGCGTTaGTACTGGAATCCAATAAGC +
Preference number: 5 (lower is better)
Translates to: EKSSSSALQILASLGRMAWLWWR*YWNPIS
Trigger: GCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA...GGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCAGCAGTGGGCTGGCTTaGGTGGCGTTTGTACTGGAA +
Preference number: 5 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGSSGLA*VAFVLE
Trigger: TTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCT...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTTCATGTCACCCATGTTaGCTGCGGTCCTTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTSCHPC*LRSLLG
Trigger: CCCGAGCAAGGACCGCAGCAAACATGGGTGACATGA...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCATCATGTCACCCATGTTaGCTGCGGTCCTTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSSCHPC*LRSLLG
Trigger: CCCGAGCAAGGACCGCAGCAAACATGGGTGACATGA...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTTCATGTCACCCATGTTaGCTGCGGTCCTTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFSCHPC*LRSLLG
Trigger: CCCGAGCAAGGACCGCAGCAAACATGGGTGACATGA...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTTTGCAGATCCTGGCATCCTTGGGCCGGATGGCCGTTAGTGTTGCAAACCCAGAGGACTGCCTCTCTCTaGTCATCTCTATGCTATGGT +
Preference number: 5 (lower is better)
Translates to: LCRSWHPWAGWPLVLQTQRTASL*SSLCYG
Trigger: ACCATAGCATAGAGATGACAAGAGAGAGGCAGTCCT...CTGGGTTTGCAACACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTGCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGTGGCAGGAGAGAGATTaGGGTGGGAGGCTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWWQERD*GGRLVR
Trigger: TCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCA...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGGCTTGGTTTGGAACTTaGAAAAGGCCTGGGGACTTC +
Preference number: 5 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWAWFGT*KRPGDF
Trigger: GAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAGC...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCACTGGGGCCCATGTCTaGCTGGCTCTAGGGACTGGG +
Preference number: 5 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLTGAHV*LALGTG
Trigger: CCCAGTCCCTAGAGCCAGCAAGACATGGGCCCCAGT...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460129.5
ENST00000646379.1
CDS-3UTR CAA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGTTCAGCTCGTCTGCTaGGGGGTTCACAGTCCACGC +
Preference number: 5 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGVQLVC*GVHSPR
Trigger: GCGTGGACTGTGAACCCCCAAGCAGACGAGCTGAAC...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646379.1
CDS CCA 90 bp CATGGCTCGACTCATTTCTTTGGTTTTTGGAGTAAAAGTCGCTGTTaGTCATGTCACCCATGTTTGCTGCGGTCCTTGCTCGGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: HGSTHFFGFWSKSRC*SCHPCLLRSLLGLG
Trigger: GCCCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGACATGACCAACAGCGACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAGTCGCACATCCTTCGTaGCCCTCGCCGGGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: STLPQSLYRQCQREPIFEVAHPS*PSPGGW
Trigger: CCACCCGCCCGGCGAGGGCAACGAAGGATGTGCGAC...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAAGGAGGTCACCATATTaGACCTGGGCTATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: PAPCLEVKKSSNSIAARERRSPY*TWAMSP
Trigger: TGGGGACATAGCCCAGGTCAAATATGGTGACCTCCT...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTTCCTGTTGTTTGGCTTaGCTCTGGCTGGCGTCCACA +
Preference number: 5 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTSCCLA*LWLAST
Trigger: TGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGGA...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCGGCTGCCCCGTCCTGTaGTTTGGCTTTGCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCGCPVL*FGFALA
Trigger: AGCCAGAGCAAAGCCAAACAACAGGACGGGGCAGCC...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATGGCTGCCCCGTCCTGTaGTTTGGCTTTGCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHGCPVL*FGFALA
Trigger: AGCCAGAGCAAAGCCAAACAACAGGACGGGGCAGCC...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCACGGACTTCTCCTTCTaGTGCATGCTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: NSIAARERVCGWKRWFSLTDFSF*CMLAFF
Trigger: GAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGT...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAGCCAGCTTGGTGAGCTaGCCCTGCAGCACGGACTTC +
Preference number: 5 (lower is better)
Translates to: LRPCCASISKTHRPVDWIASLVS*PCSTDF
Trigger: GAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGC...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATAGCCACGGCTTCTTGTaGACCACGAAGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: IAARERVCGWKRWFSLQYSHGFL*TTKVST
Trigger: TGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGCT...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTAGCCACGGCTTCTTGTaGACCACGAAGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSSHGFL*TTKVST
Trigger: TGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGCT...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATGGCAGCCACGGCTTCTaGTTGACCACGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNGSHGF*LTTKVS
Trigger: GGACACCTTCGTGGTCAACAAGAAGCCGTGGCTGCC...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGACCACTGTCATGCGATaGGTGGTCAGCGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSTTVMR*VVSVPV
Trigger: GACAGGCACGCTGACCACCAATCGCATGACAGTGGT...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTTCCATGGTCTTGGTGTaGATGGAGCTGGGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVSMVLV*MELGSG
Trigger: CCCCGACCCCAGCTCCATCAACACCAAGACCATGGA...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCCATGGTCTTGGTGTaGATGGAGCTGGGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCSMVLV*MELGSG
Trigger: CCCCGACCCCAGCTCCATCAACACCAAGACCATGGA...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAAACAAGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGTTGATGGCGATGGCATaGATCAGCAGCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: QTRGGLKVYSTFMRGTWWLMAMA*ISSSMV
Trigger: GACCATGGAGCTGCTGATCAATGCCATCGCCATCAA...CCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTTTGATGGCGATGGCATaGATCAGCAGCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFLMAMA*ISSSMV
Trigger: GACCATGGAGCTGCTGATCAATGCCATCGCCATCAA...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATATCTCAGAAGCCCCCTaGCTGTACATGCGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: IAARERVCGWKRWFSLQYISEAP*LYMRKL
Trigger: GAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGAT...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCATCTCAGAAGCCCCCTaGCTGTACATGCGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: SLREKSSSSALQILASLGISEAP*LYMRKL
Trigger: GAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGAT...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTATCTCAGAAGCCCCCTaGCTGTACATGCGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFISEAP*LYMRKL
Trigger: GAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGAT...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTAGGATGTCATTCTCATaGTCCCAGTCCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGRMSFS*SQSGSG
Trigger: CCCGGAGCCGGACTGGGACAATGAGAATGACATCCT...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAAGGATGTCATTCTCATaGTCCCAGTCCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGRMSFS*SQSGSG
Trigger: CCCGGAGCCGGACTGGGACAATGAGAATGACATCCT...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGGATGATGCCACACTaGATGGCGATGGCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARWMMPH*MAMARA
Trigger: GGCTCGGGCCATCGCCATCAAGTGTGGCATCATCCA...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTTGCGGATCCTCCTGTaGAACTCCTTGCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLLRILL*NSLPSR
Trigger: CCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCAA...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTTGCGGATCCTCCTGTaGAACTCCTTGCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVLRILL*NSLPSR
Trigger: CCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCAA...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGATCTCCCCCTTCTCGTaGCGGATCCTCCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWISPFS*RILLLN
Trigger: GTTCAACAGGAGGATCCGCAACGAGAAGGGGGAGAT...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAAATCTCCCCCTTCTCGTaGCGGATCCTCCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: FSRVALILFVEEFSGPGEISPFS*RILLLN
Trigger: GTTCAACAGGAGGATCCGCAACGAGAAGGGGGAGAT...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATATCTCCCCCTTCTCGTaGCGGATCCTCCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: IAARERVCGWKRWFSLQYISPFS*RILLLN
Trigger: GTTCAACAGGAGGATCCGCAACGAGAAGGGGGAGAT...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAAGCTTTGGCCAGATCTaGTCAATTCGCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPSFGQI*SIRSCS
Trigger: TGAGCAGGAGCGAATTGACAAGATCTGGCCAAAGCT...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTAACCAGGGTATGCTaGTCCGTTGGGGAGGAGCGA +
Preference number: 5 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWLTRVC*SVGEER
Trigger: TCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAA...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAAGTGCAGGCCCGTCGTaGGTCCCGTCCCCCGTCACG +
Preference number: 5 (lower is better)
Translates to: STLPQSLYRQCQREPIFESAGPS*VPSPVT
Trigger: CGTGACGGGGGACGGGACCAACGACGGGCCTGCACT...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGACCCACGTCGGCCTTCTaGAGTGCAGGCCCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGPTSAF*SAGPSL
Trigger: CAACGACGGGCCTGCACTCAAGAAGGCCGACGTGGG...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATATCCTCCACGTCCTCGTaGAGCTCCTCCTCCGGGATC +
Preference number: 5 (lower is better)
Translates to: LRPCCASISKTHRPVDWISSTSS*SSSSGI
Trigger: GATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGGA...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCGGAGAGGAAAGAGCATaGGACAACGACACGCGACTA +
Preference number: 5 (lower is better)
Translates to: PCFTRADLSFLVGEQWAGGEERA*DNDTRL
Trigger: TAGTCGCGTGTCGTTGTCCAATGCTCTTTCCTCTCC...GCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: EEWILQERRKVFGFPRSMGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 5 (lower is better)
Translates to: NSIAARERVCGWKRWFSLLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCATTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 5 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 5 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 5 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCCAGGGGAAGTGTCTGTaGGGCCGAGCTGTTTTTATA +
Preference number: 5 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAQGKCL*GRAVFI
Trigger: TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTG...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCGGATGGCCGTTAGTGTaGCAAACCCAGGAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: SLREKSSSSALQILASLGGWPLV*QTQEAF
Trigger: GAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCC...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGGGATGGCCGTTAGTGTaGCAAACCCAGGAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: MVCKHSYPDVMERGHGHMGWPLV*QTQEAF
Trigger: GAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCC...CATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGGATGGCCGTTAGTGTaGCAAACCCAGGAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFGWPLV*QTQEAF
Trigger: GAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGCAGATCCTGGCATCCTaGGGCCGGATGGCCGTTAGT +
Preference number: 5 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLQILAS*GRMAVS
Trigger: ACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTG...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCATGTAGGCCCTCCCAGTaGACTATGGCTCTTTTCCCG +
Preference number: 5 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSCRPSQ*TMALFP
Trigger: CGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTACA...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATATGTAGGCCCTCCCAGTaGACTATGGCTCTTTTCCCG +
Preference number: 5 (lower is better)
Translates to: NIQDATQGKCLLGRAVFICRPSQ*TMALFP
Trigger: CGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTACA...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTGGGATGGGCTGACTTaGAACCCCAAACCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYWDGLT*NPKPSS
Trigger: ACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCA...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCTCAGGTGATGCGCTCTaGAAGGTCCTCCTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFSGDAL*KVLLPG
Trigger: TCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGA...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCTCAGGTGATGCGCTCTaGAAGGTCCTCCTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: SLREKSSSSALQILASLGSGDAL*KVLLPG
Trigger: TCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGA...GCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTAGCAGTGGGCTGGCTTaGGTGGCGTTTGTACTGGAA +
Preference number: 5 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSSSGLA*VAFVLE
Trigger: TTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCT...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCATCGCTCCCTGTTCCCCTTCCCTCATCTGTaGAGGGGGAGACAAGTTGGT +
Preference number: 5 (lower is better)
Translates to: PDKRRPTLMLAFFHRSLFPFPHL*RGRQVG
Trigger: ACCAACTTGTCTCCCCCTCAACAGATGAGGGAAGGG...GAACAGGGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp ATGGCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGGGCATTTCAGCATGGTaGGGGAAAAGAGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: MAIIKHPGCNPGEVSVGPGISAW*GKRVAS
Trigger: GGAAGCCACTCTTTTCCCCAACCATGCTGAAATGCC...CGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp GAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCCTGGCATCCTTGGGCCGGATGGTCTAATGGTGGGATTTaGGACACAATGGCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: EKSLRAVLCRSWHPWAGWSNGGI*DTMAGE
Trigger: CTCTCCTGCCATTGTGTCCAAAATCCCACCATTAGA...CCATCCGGCCCAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGACTTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCAAGCAGCCTCCAATATaGTTTTCAGTGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSKQPPI*FSVEGV
Trigger: CACCCCCTCCACTGAAAACAATATTGGAGGCTGCTT...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCTGGCTGGCGTCCACATaGCCATCCTGCATTTTACCT +
Preference number: 5 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSIWLAST*PSCILP
Trigger: AGGTAAAATGCAGGATGGCAATGTGGACGCCAGCCA...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000452124.2
ENST00000643662.1
CDS-3UTR CAA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCTCAACAGGTGAGGTTTaGAGGCGCCGGCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLSTGEV*RRRQMA
Trigger: AGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGA...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGTCAACAGGTGAGGTTTaGAGGCGCCGGCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVSTGEV*RRRQMA
Trigger: AGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGA...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GATGTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGAGGAGGTCACCATATTaGACCTGGGCTATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: DVMERGHGHMTDQRSGEMRRSPY*TWAMSP
Trigger: TGGGGACATAGCCCAGGTCAAATATGGTGACCTCCT...CATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTCACTATCTGCAGCATTaGAAGCTGCCGCACCGTCTG +
Preference number: 5 (lower is better)
Translates to: EVSVGPSCFYSISATSVLHYLQH*KLPHRL
Trigger: CAGACGGTGCGGCAGCTTCAAATGCTGCAGATAGTG...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
CDS-3UTR CAA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTTGGCTGGCGTCCACATaGCCATCCTGCATTTTACCA +
Preference number: 5 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFWLAST*PSCILP
Trigger: TGGTAAAATGCAGGATGGCAATGTGGACGCCAGCCA...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTGGCTGCCCCGTCCTGTaGTTTGGCTTTGCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAGCPVL*FGFALA
Trigger: AGCCAGAGCAAAGCCAAACAACAGGACGGGGCAGCC...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTACGGACTTCTCCTTCTaGTGCATGCTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SNSIAARERVCGWKRWFSTDFSF*CMLAFF
Trigger: GAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGT...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAACGGACTTCTCCTTCTaGTGCATGCTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIATDFSF*CMLAFF
Trigger: GAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGT...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTACGGACTTCTCCTTCTaGTGCATGCTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFTDFSF*CMLAFF
Trigger: GAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGT...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTACCACTGTCATGCGATaGGTGGTCAGCGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARTTVMR*VVSVPV
Trigger: GACAGGCACGCTGACCACCAATCGCATGACAGTGGT...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTAGCAGCTCCATGGTCTaGGTGTTGATGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARSSSMV*VLMELG
Trigger: CCCCAGCTCCATCAACACCAAGACCATGGAGCTGCT...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATCCAGGATGCAACCCAGGAGCAGCTCCATGGTCTaGGTGTTGATGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: SRQKSEHGYHKTSRMQPRSSSMV*VLMELG
Trigger: CCCCAGCTCCATCAACACCAAGACCATGGAGCTGCT...CCTGGGTTGCATCCTGGATGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCAGCAGCTCCATGGTCTaGGTGTTGATGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCSSSMV*VLMELG
Trigger: CCCCAGCTCCATCAACACCAAGACCATGGAGCTGCT...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCAGCAGCTCCATGGTCTaGGTGTTGATGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: FCKRGGKCLVFLEAWDIISSSMV*VLMELG
Trigger: CCCCAGCTCCATCAACACCAAGACCATGGAGCTGCT...GATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTTTGATGGCGATGGCATaGATCAGCAGCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSLMAMA*ISSSMV
Trigger: GACCATGGAGCTGCTGATCAATGCCATCGCCATCAA...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTTTGATGGCGATGGCATaGATCAGCAGCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFLMAMA*ISSSMV
Trigger: GACCATGGAGCTGCTGATCAATGCCATCGCCATCAA...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGATCTCAGAAGCCCCCTaGCTGTACATGCGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWISEAP*LYMRKL
Trigger: GAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGAT...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCATTTTGCAGCACTTCTaGAGCACGATCTCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAAILQHF*STISEA
Trigger: GGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAAT...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAATTTTGCAGCACTTCTaGAGCACGATCTCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPILQHF*STISEA
Trigger: GGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAAT...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGCCCCATTGAGGATTTaGCAGCACTTCTTGAGCACG +
Preference number: 5 (lower is better)
Translates to: QGCPMFYTCRSFLPCRRAAPLRI*QHFLST
Trigger: CGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGC...TGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTGCCCCATTGAGGATTTaGCAGCACTTCTTGAGCACG +
Preference number: 5 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFAPLRI*QHFLST
Trigger: CGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGC...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGGGCTCTCCCGCCCCATaGAGGATTTTGCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSGSPAP*RILQHF
Trigger: GAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGCC...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGGCTCTCCCGCCCCATaGAGGATTTTGCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVGSPAP*RILQHF
Trigger: GAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGCC...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCAGGATGTCATTCTCATaGTCCCAGTCCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCRMSFS*SQSGSG
Trigger: CCCGGAGCCGGACTGGGACAATGAGAATGACATCCT...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTAGGATGTCATTCTCATaGTCCCAGTCCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARRMSFS*SQSGSG
Trigger: CCCGGAGCCGGACTGGGACAATGAGAATGACATCCT...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATTTGCGGATCCTCCTGTaGAACTCCTTGCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNLRILL*NSLPSR
Trigger: CCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCAA...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTAACCAGGGTATGCTaGTCCGTTGGGGAGGAGCGA +
Preference number: 5 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGLTRVC*SVGEER
Trigger: TCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAA...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGTTAACCAGGGTATGCTaGTCCGTTGGGGAGGAGCGA +
Preference number: 5 (lower is better)
Translates to: FSPVFGFRLLLVAAWVSWLTRVC*SVGEER
Trigger: TCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAA...CCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTCCCACGTCGGCCTTCTaGAGTGCAGGCCCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSPTSAF*SAGPSL
Trigger: CAACGACGGGCCTGCACTCAAGAAGGCCGACGTGGG...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCATGTCTGAGGCCTCCTaGGCCACGTCAGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: KLKRVSLREKSSSSALQIMSEAS*ATSVPA
Trigger: CGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACAT...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTATGTCTGAGGCCTCCTaGGCCACGTCAGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLMSEAS*ATSVPA
Trigger: CGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACAT...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCGCCTCCTTGAGGAACTaGAGTCTGCTGGTCGGGATG +
Preference number: 5 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCASLRN*SLLVGM
Trigger: CATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGC...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGCCTCCTTGAGGAACTaGAGTCTGCTGGTCGGGATG +
Preference number: 5 (lower is better)
Translates to: EEWILQERRKVFGFPRSMASLRN*SLLVGM
Trigger: CATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGC...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATAGCCTGCCTGCCTCCTaGAGGAACTTGAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNSLPAS*RNLSLL
Trigger: CAGCAGACTCAAGTTCCTCAAGGAGGCAGGCAGGCT...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTAGCCTGCCTGCCTCCTaGAGGAACTTGAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARSLPAS*RNLSLL
Trigger: CAGCAGACTCAAGTTCCTCAAGGAGGCAGGCAGGCT...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTAGCCTGCCTGCCTCCTaGAGGAACTTGAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGSLPAS*RNLSLL
Trigger: CAGCAGACTCAAGTTCCTCAAGGAGGCAGGCAGGCT...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGGGGAGGATTGAAAGTGTACAGTACATTCATGCGGGGGACGTGGTGGCTGGGCCCGCTCTTGAAAGTATaGACTACTTCAATCTGTGTC +
Preference number: 5 (lower is better)
Translates to: RGGLKVYSTFMRGTWWLGPLLKV*TTSICV
Trigger: GACACAGATTGAAGTAGTCAATACTTTCAAGAGCGG...GCCCAGCCACCACGTCCCCCGCATGAATGTACTGTACACTTTCAATCCTCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 5 (lower is better)
Translates to: EEWILQERRKVFGFPRSMMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 5 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 5 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACCTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 5 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: SSNSIAARERVCGWKRWFEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGTTGGGTGCCTGGATGGGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: FGFRLLLVAAWVSWVPGWVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...CCATCCAGGCACCCAACTCACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 5 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp TCGATGGCGCTGTTGTTCTTGTTGAGGGATGACGGCGGGCTCGAGTTCTGCTTGCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 5 (lower is better)
Translates to: SMALLFLLRDDGGLEFCLQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...CAAGCAGAACTCGAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGCCATCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCACGTCTACGGAGCATGTaGTTAAACCCCTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIARLRSM*LNPSGW
Trigger: CCATCCTGAGGGGTTTAACAACATGCTCCGTAGACG...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACGTCTACGGAGCATGTaGTTAAACCCCTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSRLRSM*LNPSGW
Trigger: CCATCCTGAGGGGTTTAACAACATGCTCCGTAGACG...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTGGATGGCCGTTAGTGTaGCAAACCCAGGAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: MFYTCRSFLPCRRAVGWLGWPLV*QTQEAF
Trigger: GAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCC...AAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTTCTTCGAGCAGTGCTTaGCAGATCCTGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSSSSSA*QILASL
Trigger: CAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGA...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAAAGAGGCGGAAAGTGTTaGGTTTTCCTCGAAGCATGG +
Preference number: 5 (lower is better)
Translates to: PAPCLEVKKSSNSIAARERGGKC*VFLEAW
Trigger: CCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCT...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACAGAGGCGGAAAGTGTTaGGTTTTCCTCGAAGCATGG +
Preference number: 5 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYRGGKC*VFLEAW
Trigger: CCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCT...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TGGCTTTGGTGGCGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCATGGGATGGGCTGACTTaGAACCCCAAACCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: WLWWRLYWNPISTSEGWSWDGLT*NPKPSS
Trigger: ACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCA...TGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGGGCTGGTCACCCCTTaGGTTATGCAGTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGGLVTP*VMQFLS
Trigger: GGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCC...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGAGACCAACGCTAATGTaGGCATTCTTCCATCGCTCC +
Preference number: 5 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMRPTLM*AFFHRS
Trigger: GGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCT...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTAGACCAACGCTAATGTaGGCATTCTTCCATCGCTCC +
Preference number: 5 (lower is better)
Translates to: QDATQGKCLLGRAVFIASRPTLM*AFFHRS
Trigger: GGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCT...AGATGCTATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTACAGGGGTGGTGGCTCTaGGCTATGAAAATCACCACC +
Preference number: 5 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLQGWWL*AMKITT
Trigger: GGTGGTGATTTTCATAGCCAAGAGCCACCACCCCTG...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR CAA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGACAGAGCCCAGAATTaGGGGGTGGGAATGGGACAG +
Preference number: 5 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLDRAQN*GVGMGQ
Trigger: CTGTCCCATTCCCACCCCCAAATTCTGGGCTCTGTC...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp GGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCTCTAATGGTGGGATTTaGGACACAATGGCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: GDPAPCLEVKKSSNSIAASNGGI*DTMAGE
Trigger: CTCTCCTGCCATTGTGTCCAAAATCCCACCATTAGA...GGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp AAGGGAAGGGGCTGGGCTGACACAGCCATCGTGAGGAGGGTCAGCATGAGGAATCCACGTGTGCATTTATaGTTATTGCTCAGTATAGTG +
Preference number: 5 (lower is better)
Translates to: KGRGWADTAIVRRVSMRNPRVHL*LLLSIV
Trigger: CACTATACTGAGCAATAACAATAAATGCACACGTGG...ATTCCTCATGCTGACCCTCCTCACGATGGCTGTGTCAGCCCAGCCCCTTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATATCAACAGGTGAGGTTTaGAGGCGCCGGCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: LRPCCASISKTHRPVDWISTGEV*RRRQMA
Trigger: AGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGA...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CCCAGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCTCCTGCATTTTACCATaGACTAGGCTGGCATTCGCA +
Preference number: 5 (lower is better)
Translates to: PSGDPAPCLEVKKSSNSISCILP*TRLAFA
Trigger: TGCGAATGCCAGCCTAGTCAATGGTAAAATGCAGGA...GATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGTCCTGTTGTTTGGCTTaGCTCTGGCTGGCGTCCACA +
Preference number: 5 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLSCCLA*LWLAST
Trigger: TGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGGA...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTCCTGTTGTTTGGCTTaGCTCTGGCTGGCGTCCACA +
Preference number: 5 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARSCCLA*LWLAST
Trigger: TGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGGA...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAACGGACTTCTCCTTCTaGTGCATGCTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGTDFSF*CMLAFF
Trigger: GAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGT...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAGCCAGCTTGGTGAGCTaGCCCTGCAGCACGGACTTC +
Preference number: 5 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKASLVS*PCSTDF
Trigger: GAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGC...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTGCCAGCTTGGTGAGCTaGCCCTGCAGCACGGACTTC +
Preference number: 5 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSASLVS*PCSTDF
Trigger: GAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGC...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCAGCCACGGCTTCTTGTaGACCACGAAGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLSHGFL*TTKVST
Trigger: TGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGCT...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGAGCCACGGCTTCTTGTaGACCACGAAGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLSHGFL*TTKVST
Trigger: TGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGCT...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTAGCCACGGCTTCTTGTaGACCACGAAGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCSHGFL*TTKVST
Trigger: TGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGCT...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATCCATGGTCTTGGTGTaGATGGAGCTGGGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGSMVLV*MELGSG
Trigger: CCCCGACCCCAGCTCCATCAACACCAAGACCATGGA...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCAGCAGCTCCATGGTCTaGGTGTTGATGGAGCTGGGG +
Preference number: 5 (lower is better)
Translates to: QASFIPDKRRPTLMLAFFSSSMV*VLMELG
Trigger: CCCCAGCTCCATCAACACCAAGACCATGGAGCTGCT...GAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGATCTCAGAAGCCCCCTaGCTGTACATGCGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSISEAP*LYMRKL
Trigger: GAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGAT...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGCCCCATTGAGGATTTaGCAGCACTTCTTGAGCACG +
Preference number: 5 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGAPLRI*QHFLST
Trigger: CGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGC...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGGCTCTCCCGCCCCATaGAGGATTTTGCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAGSPAP*RILQHF
Trigger: GAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGCC...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGTGGATGATGCCACACTaGATGGCGATGGCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: SIQLRPCCASISKTHRPVWMMPH*MAMARA
Trigger: GGCTCGGGCCATCGCCATCAAGTGTGGCATCATCCA...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATATTGCGGATCCTCCTGTaGAACTCCTTGCCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: LRPCCASISKTHRPVDWILRILL*NSLPSR
Trigger: CCTCGAGGGCAAGGAGTTCAACAGGAGGATCCGCAA...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGATCTCCCCCTTCTCGTaGCGGATCCTCCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSISPFS*RILLLN
Trigger: GTTCAACAGGAGGATCCGCAACGAGAAGGGGGAGAT...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTATCTCCCCCTTCTCGTaGCGGATCCTCCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGISPFS*RILLLN
Trigger: GTTCAACAGGAGGATCCGCAACGAGAAGGGGGAGAT...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCTGTTTTTATAAGCTTTGGCCAGATCTaGTCAATTCGCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: NIQDATQGKCLLGRAVFISFGQI*SIRSCS
Trigger: TGAGCAGGAGCGAATTGACAAGATCTGGCCAAAGCT...TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTAGCTTTGGCCAGATCTaGTCAATTCGCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSSFGQI*SIRSCS
Trigger: TGAGCAGGAGCGAATTGACAAGATCTGGCCAAAGCT...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAAAGCTTTGGCCAGATCTaGTCAATTCGCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: FSRVALILFVEEFSGPGESFGQI*SIRSCS
Trigger: TGAGCAGGAGCGAATTGACAAGATCTGGCCAAAGCT...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTTTAACCAGGGTATGCTaGTCCGTTGGGGAGGAGCGA +
Preference number: 5 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVLTRVC*SVGEER
Trigger: TCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAA...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTTCCTCCACGTCCTCGTaGAGCTCCTCCTCCGGGATC +
Preference number: 5 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSSSTSS*SSSSGI
Trigger: GATCCCGGAGGAGGAGCTCAACGAGGACGTGGAGGA...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCAAGGAGGCCCCGCTCTaGAAAGTATTGACTACTTCA +
Preference number: 5 (lower is better)
Translates to: NSIAARERVCGWKRWFSLKEAPL*KVLTTS
Trigger: TGAAGTAGTCAATACTTTCAAGAGCGGGGCCTCCTT...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGCTAGGGCTAGAGAGATaGGCTACATCCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVLGLER*ATSWLW
Trigger: CCAGAGCCAGGATGTAGCCAATCTCTCTAGCCCTAG...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SIQLRPCCASISKTHRPVGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTCTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 5 (lower is better)
Translates to: EVSVGPSCFYSISATSVLLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGAATCTTCGATCCGGAATTCAGGATGAGCCATGAAGTTATGGATGGAGGTTCGGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: GIFDPEFRMSHEVMDGGSEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...CGAACCTCCATCCATAACTTCATGGCTCATCCTGAATTCCGGATCGAAGATTCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: SIQLRPCCASISKTHRPVVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp ACATGGAGCATGGTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: TWSMVCKHSYPDVMERGHFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...GTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACACCATGCTCCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACTGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: DLSFLVGEQWAGFGGVCTVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...AGTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 5 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAACAGGGGAAGTGTCTGTaGGGCCGAGCTGTTTTTATA +
Preference number: 5 (lower is better)
Translates to: FSRVALILFVEEFSGPGEQGKCL*GRAVFI
Trigger: TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTG...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGGATGGCCGTTAGTGTaGCAAACCCAGGAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLGWPLV*QTQEAF
Trigger: GAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCC...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CCTCAAGTTTTTCCACCGCCATCCAGATGTAGGCCCTCCCAGTTGACTATGGCTCTCAAGCGAGTTTCATaGAGAGAAAAGTCTTCGAGC +
Preference number: 5 (lower is better)
Translates to: PQVFPPPSRCRPSQLTMALKRVS*REKSSS
Trigger: GCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAG...AGCCATAGTCAACTGGGAGGGCCTACATCTGGATGGCGGTGGAAAAACTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTGGCTCTCATCTTGTTaGTGGAAGAGTTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWWLSSC*WKSSLG
Trigger: GCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCA...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGCGAGTGGCTCTCATCTaGTTTGTGGAAGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMRVALI*FVEEFS
Trigger: AGAGAACTCTTCCACAAACAAGATGAGAGCCACTCG...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCAGCCAGAGAACGAGTGGCTCTCATCTaGTTTGTGGAAGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: PAPCLEVKKSSNSIAARERVALI*FVEEFS
Trigger: AGAGAACTCTTCCACAAACAAGATGAGAGCCACTCG...TTCTCTGGCTGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGATCTTTCCTTCCTTGTAGGAGAGCAGTGGGCTGGCTTTGGTGGCGTTTGTACCGAGTGGCTCTCATCTaGTTTGTGGAAGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: RSFLPCRRAVGWLWWRLYRVALI*FVEEFS
Trigger: AGAGAACTCTTCCACAAACAAGATGAGAGCCACTCG...GTACAAACGCCACCAAAGCCAGCCCACTGCTCTCCTACAAGGAAGGAAAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTCAGGTGATGCGCTCTaGAAGGTCCTCCTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCSGDAL*KVLLPG
Trigger: TCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGA...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGGGCTGGTCACCCCTTaGGTTATGCAGTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAGLVTP*VMQFLS
Trigger: GGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCC...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGTGGCTTTGGTGGCGTTaGTACTGGAATCCAATAAGC +
Preference number: 5 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMWLWWR*YWNPIS
Trigger: GCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GCATGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGAGCAGTGGGCTGGCTTaGGTGGCGTTTGTACTGGAA +
Preference number: 5 (lower is better)
Translates to: ACVQASFIPDKRRPTLMLSSGLA*VAFVLE
Trigger: TTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCT...CAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGTTACTCCTGGAGCCCTaGTCTAGAGGACAGAAAAGA +
Preference number: 5 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMLLLEP*SRGQKR
Trigger: TCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAA...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp TTCTCTCCTCCTCTCCCTTCGTCTACGGAGCATGTTGTTAAACCCCTCAGGATGAGGACTGCCTCTCTCTaGTCATCTCTATGCTATGGT +
Preference number: 5 (lower is better)
Translates to: FSPPLPSSTEHVVKPLRMRTASL*SSLCYG
Trigger: ACCATAGCATAGAGATGACAAGAGAGAGGCAGTCCT...CATCCTGAGGGGTTTAACAACATGCTCCGTAGACGAAGGGAGAGGAGGAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGACCAAGGTGGGTGACTTaGGTTCCCAAGCTGAGATTG +
Preference number: 5 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGPRWVT*VPKLRL
Trigger: CAATCTCAGCTTGGGAACCAAAGTCACCCACCTTGG...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp GCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTCCAAGGTGGGTGACTTaGGTTCCCAAGCTGAGATTG +
Preference number: 5 (lower is better)
Translates to: ARERVCGWKRWFSLQYLVPRWVT*VPKLRL
Trigger: CAATCTCAGCTTGGGAACCAAAGTCACCCACCTTGG...AACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp TTTTCCCGAGTGGCTCTCATCTTGTTTGTGGAAGAGTTCTCTGGGCCTGGAGAAGCTTGGTTTGGAACTTaGAAAAGGCCTGGGGACTTC +
Preference number: 5 (lower is better)
Translates to: FSRVALILFVEEFSGPGEAWFGT*KRPGDF
Trigger: GAAGTCCCCAGGCCTTTTCAAAGTTCCAAACCAAGC...TTCTCCAGGCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCACTCGGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTAGGAGGTCACCATATTaGACCTGGGCTATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARRRSPY*TWAMSP
Trigger: TGGGGACATAGCCCAGGTCAAATATGGTGACCTCCT...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAAGAGCTTTCATCAATCTaGAGGTCATTGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: VMERGHGHMTDQRSGEMEELSSI*RSLPWM
Trigger: CATCCAGGGCAATGACCTCAAGATTGATGAAAGCTC...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATGAGCTTTCATCAATCTaGAGGTCATTGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: IAARERVCGWKRWFSLQYELSSI*RSLPWM
Trigger: CATCCAGGGCAATGACCTCAAGATTGATGAAAGCTC...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTGAGCTTTCATCAATCTaGAGGTCATTGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: SNSIAARERVCGWKRWFSELSSI*RSLPWM
Trigger: CATCCAGGGCAATGACCTCAAGATTGATGAAAGCTC...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCCTGCATTTTACCATaGACTAGGCTGGCATTCGCA +
Preference number: 5 (lower is better)
Translates to: SSNSIAARERVCGWKRWFSCILP*TRLAFA
Trigger: TGCGAATGCCAGCCTAGTCAATGGTAAAATGCAGGA...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGACGGACTTCTCCTTCTaGTGCATGCTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: EEWILQERRKVFGFPRSMTDFSF*CMLAFF
Trigger: GAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGT...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTGGCAGCCACGGCTTCTaGTTGACCACGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSGSHGF*LTTKVS
Trigger: GGACACCTTCGTGGTCAACAAGAAGCCGTGGCTGCC...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTTGATGGCGATGGCATaGATCAGCAGCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCLMAMA*ISSSMV
Trigger: GACCATGGAGCTGCTGATCAATGCCATCGCCATCAA...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTATCTCAGAAGCCCCCTaGCTGTACATGCGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAISEAP*LYMRKL
Trigger: GAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGAT...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATCCAGGATGCAACCCAGGGCCCCATTGAGGATTTaGCAGCACTTCTTGAGCACG +
Preference number: 5 (lower is better)
Translates to: SRQKSEHGYHKTSRMQPRAPLRI*QHFLST
Trigger: CGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGC...CCTGGGTTGCATCCTGGATGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCGCCCCATTGAGGATTTaGCAGCACTTCTTGAGCACG +
Preference number: 5 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCAPLRI*QHFLST
Trigger: CGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGC...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGGCCCCATTGAGGATTTaGCAGCACTTCTTGAGCACG +
Preference number: 5 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLAPLRI*QHFLST
Trigger: CGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGC...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCCCCATTGAGGATTTaGCAGCACTTCTTGAGCACG +
Preference number: 5 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVAPLRI*QHFLST
Trigger: CGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGC...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGGCTCTCCCGCCCCATaGAGGATTTTGCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: SIQLRPCCASISKTHRPVGSPAP*RILQHF
Trigger: GAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGCC...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTAGGATGTCATTCTCATaGTCCCAGTCCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLRMSFS*SQSGSG
Trigger: CCCGGAGCCGGACTGGGACAATGAGAATGACATCCT...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTGGATGATGCCACACTaGATGGCGATGGCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVWMMPH*MAMARA
Trigger: GGCTCGGGCCATCGCCATCAAGTGTGGCATCATCCA...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAACCCACGTCGGCCTTCTaGAGTGCAGGCCCGTCGTTG +
Preference number: 5 (lower is better)
Translates to: ASISKTHRPVDWINSLRKPTSAF*SAGPSL
Trigger: CAACGACGGGCCTGCACTCAAGAAGGCCGACGTGGG...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCACCGCTCTTGAAAGTATaGACTACTTCAATCTGTGTC +
Preference number: 5 (lower is better)
Translates to: QHRSQRKGLWVETLVFSPPLLKV*TTSICV
Trigger: GACACAGATTGAAGTAGTCAATACTTTCAAGAGCGG...TGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTGGAGAGGAAAGAGCATaGGACAACGACACGCGACTA +
Preference number: 5 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCGEERA*DNDTRL
Trigger: TAGTCGCGTGTCGTTGTCCAATGCTCTTTCCTCTCC...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp ACTTACTCCTGGAGCCCTTGTCTAGAGGACAGAAAAGAAGCTATGTGGATGATGCTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 5 (lower is better)
Translates to: TYSWSPCLEDRKEAMWMMLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...CATCATCCACATAGCTTCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTCTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 5 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCCTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 5 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: KGLWVETLVFSPVFGFRLEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...CAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: GGNVGFLSSIWFPIVARCEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...GCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: VGGNVGFLSSIWFPIVAREEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: SSNSIAARERVCGWKRWFVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: SNSIAARERVCGWKRWFSVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 5 (lower is better)
Translates to: LRPCCASISKTHRPVDWIGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCTATCATAAAACATCCAGGATGCAACCCAGGGGAAGTGTCTGTTGGGCCGAGCCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 5 (lower is better)
Translates to: AIIKHPGCNPGEVSVGPSQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...GCTCGGCCCAACAGACACTTCCCCTGGGTTGCATCCTGGATGTTTTATGATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GAGGAATGGATTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGCGTCTACGGAGCATGTaGTTAAACCCCTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: EEWILQERRKVFGFPRSMRLRSM*LNPSGW
Trigger: CCATCCTGAGGGGTTTAACAACATGCTCCGTAGACG...CATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAATCCATTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAGGATGGCCGTTAGTGTaGCAAACCCAGGAAGCCTTC +
Preference number: 5 (lower is better)
Translates to: RKVFGFPRSMGHHRSWYSGWPLV*QTQEAF
Trigger: GAAGGCTTCCTGGGTTTGCAACACTAACGGCCATCC...TGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CGGCTTCAAGGAAGCCAAGAGTCTGGGATTGATTCACATTCATTTCAGGCTCAATCTTCGAGCAGTGCTTaGCAGATCCTGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: RLQGSQESGIDSHSFQAQSSSSA*QILASL
Trigger: CAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGA...TTGAGCCTGAAATGAATGTGAATCAATCCCAGACTCTTGGCTTCCTTGAAGCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS-3UTR CAA 90 bp TGTGTGCAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATCTTCGAGCAGTGCTTaGCAGATCCTGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: CVQASFIPDKRRPTLMLASSSSA*QILASL
Trigger: CAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGA...TGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTGCACACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GAAGTGTCTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAGAGGCGGAAAGTGTTaGGTTTTCCTCGAAGCATGG +
Preference number: 5 (lower is better)
Translates to: EVSVGPSCFYSISATSVLRGGKC*VFLEAW
Trigger: CCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCT...AAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAGACACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTCGAGTGGCTCTCATCTaGTTTGTGGAAGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: SSNSIAARERVCGWKRWFRVALI*FVEEFS
Trigger: AGAGAACTCTTCCACAAACAAGATGAGAGCCACTCG...AAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTCATGGAACGAGGTCACGGACACATGACTGATCAAAGAAGTGGGGAGATGGAACGAGTGGCTCTCATCTaGTTTGTGGAAGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: VMERGHGHMTDQRSGEMERVALI*FVEEFS
Trigger: AGAGAACTCTTCCACAAACAAGATGAGAGCCACTCG...TTCCATCTCCCCACTTCTTTGATCAGTCATGTGTCCGTGACCTCGTTCCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCTGGGATGGGCTGACTTaGAACCCCAAACCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: FCKRGGKCLVFLEAWDIIWDGLT*NPKPSS
Trigger: ACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCA...GATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTTAAACCACAAACATTTCAGAACCACACTGCACGAGTCAGAAGAGCCAGCGATTCAGGTGATGCGCTCTaGAAGGTCCTCCTTCCAGGA +
Preference number: 5 (lower is better)
Translates to: FKPQTFQNHTARVRRASDSGDAL*KVLLPG
Trigger: TCCTGGAAGGAGGACCTTCAAGAGCGCATCACCTGA...ATCGCTGGCTCTTCTGACTCGTGCAGTGTGGTTCTGAAATGTTTGTGGTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCGGGCTGGTCACCCCTTaGGTTATGCAGTTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: KLKRVSLREKSSSSALQIGLVTP*VMQFLS
Trigger: GGAGAGGAACTGCATAACCAAAGGGGTGACCAGCCC...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTAGACCAACGCTAATGTaGGCATTCTTCCATCGCTCC +
Preference number: 5 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGRPTLM*AFFHRS
Trigger: GGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCT...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTACTCCTGGAGCCCTaGTCTAGAGGACAGAAAAGA +
Preference number: 5 (lower is better)
Translates to: QPEKGSVGGNVGFLSSIWLLLEP*SRGQKR
Trigger: TCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAA...CCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTGGCATTTCAGCATGGTaGGGGAAAAGAGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARGISAW*GKRVAS
Trigger: GGAAGCCACTCTTTTCCCCAACCATGCTGAAATGCC...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTGGCATTTCAGCATGGTaGGGGAAAAGAGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCGISAW*GKRVAS
Trigger: GGAAGCCACTCTTTTCCCCAACCATGCTGAAATGCC...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTTGGCAGGAGAGAGATTaGGGTGGGAGGCTTGTCAGA +
Preference number: 5 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAWQERD*GGRLVR
Trigger: TCTGACAAGCCTCCCACCCAAATCTCTCTCCTGCCA...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp TGTTCCAAGGCTGCCCCATGTTTTACACGTGCAGATCTTTCCTTCCTTGTAGGAGAGCTTTCATCAATCTaGAGGTCATTGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: CSKAAPCFTRADLSFLVGELSSI*RSLPWM
Trigger: CATCCAGGGCAATGACCTCAAGATTGATGAAAGCTC...TCCTACAAGGAAGGAAAGATCTGCACGTGTAAAACATGGGGCAGCCTTGGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATATGGCTGGCGTCCACATaGCCATCCTGCATTTTACCA +
Preference number: 5 (lower is better)
Translates to: LRPCCASISKTHRPVDWIWLAST*PSCILP
Trigger: TGGTAAAATGCAGGATGGCAATGTGGACGCCAGCCA...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACAACCACTGTCATGCGATaGGTGGTCAGCGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTTTVMR*VVSVPV
Trigger: GACAGGCACGCTGACCACCAATCGCATGACAGTGGT...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTATTTTGCAGCACTTCTaGAGCACGATCTCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: SQRKGLWVETLVFSPVFGILQHF*STISEA
Trigger: GGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAAT...ACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCGGCTCTCCCGCCCCATaGAGGATTTTGCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: CLVFLEAWDIIDHGIQNVGSPAP*RILQHF
Trigger: GAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGCC...GACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTGGCTCTCCCGCCCCATaGAGGATTTTGCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCGSPAP*RILQHF
Trigger: GAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGCC...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTGGCTCTCCCGCCCCATaGAGGATTTTGCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSGSPAP*RILQHF
Trigger: GAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGCC...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTAGCTTTGGCCAGATCTaGTCAATTCGCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVSFGQI*SIRSCS
Trigger: TGAGCAGGAGCGAATTGACAAGATCTGGCCAAAGCT...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAATGTCTGAGGCCTCCTaGGCCACGTCAGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKMSEAS*ATSVPA
Trigger: CGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACAT...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 5 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: CASISKTHRPVDWINSLRVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: VGFLSSIWFPIVARCCLGFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...ACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGAGGATTTTGCCAGGTGGGATGGGCTGACTTTGAACCCCAAACCCTCAAGTTTCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 5 (lower is better)
Translates to: GGFCQVGWADFEPQTLKFQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...AAACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCACCTGGCAAAATCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCCAGGGGAAGTGTCTGTaGGGCCGAGCTGTTTTTATA +
Preference number: 5 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCQGKCL*GRAVFI
Trigger: TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTG...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCACGGTAGTGACATTATaGAACGGAAATAGCAGGCAA +
Preference number: 5 (lower is better)
Translates to: NSIAARERVCGWKRWFSLTVVTL*NGNSRQ
Trigger: TTGCCTGCTATTTCCGTTCAATAATGTCACTACCGT...GAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCCGTCTACGGAGCATGTaGTTAAACCCCTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: QASFIPDKRRPTLMLAFFRLRSM*LNPSGW
Trigger: CCATCCTGAGGGGTTTAACAACATGCTCCGTAGACG...GAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATATCTTCGAGCAGTGCTTaGCAGATCCTGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: LRPCCASISKTHRPVDWISSSSA*QILASL
Trigger: CAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGA...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCACTCAAGCGAGTTTCATaGAGAGAAAAGTCTTCGAGC +
Preference number: 5 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIALKRVS*REKSSS
Trigger: GCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAG...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AGCAGGCAAAAATCAGAGCATGGCTATCATAAAACATCCAGGATGCAACCCAGGAGAGGCGGAAAGTGTTaGGTTTTCCTCGAAGCATGG +
Preference number: 5 (lower is better)
Translates to: SRQKSEHGYHKTSRMQPRRGGKC*VFLEAW
Trigger: CCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCT...CCTGGGTTGCATCCTGGATGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATTGGCTCTCATCTTGTTaGTGGAAGAGTTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHWLSSC*WKSSLG
Trigger: GCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCA...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTTGGGATGGGCTGACTTaGAACCCCAAACCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAWDGLT*NPKPSS
Trigger: ACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCA...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CGTTTGTACTGGAATCCAATAAGCACATCTGAGGGCTGGTCACCCCTTTGGTTATGGCTTTGGTGGCGTTaGTACTGGAATCCAATAAGC +
Preference number: 5 (lower is better)
Translates to: RLYWNPISTSEGWSPLWLWLWWR*YWNPIS
Trigger: GCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA...TAACCAAAGGGGTGACCAGCCCTCAGATGTGCTTATTGGATTCCAGTACAAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGAGACCAACGCTAATGTaGGCATTCTTCCATCGCTCC +
Preference number: 5 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVRPTLM*AFFHRS
Trigger: GGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCT...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGAGACCAACGCTAATGTaGGCATTCTTCCATCGCTCC +
Preference number: 5 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSRPTLM*AFFHRS
Trigger: GGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCT...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTTCATGTCACCCATGTTaGCTGCGGTCCTTGCTCGGG +
Preference number: 5 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSSCHPC*LRSLLG
Trigger: CCCGAGCAAGGACCGCAGCAAACATGGGTGACATGA...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAAGCATCCTTCATTCCTGACAAGAGAAGACCAACGCTAATGTTGGCATTCTTCATCTCTATGCTATGGTaGGGACAAGGGGACAAGGGG +
Preference number: 5 (lower is better)
Translates to: QASFIPDKRRPTLMLAFFISMLW*GQGDKG
Trigger: CCCCTTGTCCCCTTGTCCCAACCATAGCATAGAGAT...GAAGAATGCCAACATTAGCGTTGGTCTTCTCTTGTCAGGAATGAAGGATGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCAGGAGGTCACCATATTaGACCTGGGCTATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: KLKRVSLREKSSSSALQIRRSPY*TWAMSP
Trigger: TGGGGACATAGCCCAGGTCAAATATGGTGACCTCCT...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGAGGAGGTCACCATATTaGACCTGGGCTATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: SIQLRPCCASISKTHRPVRRSPY*TWAMSP
Trigger: TGGGGACATAGCCCAGGTCAAATATGGTGACCTCCT...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGGTGGAGCTTTCATCAATCTaGAGGTCATTGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: LVFSPVFGFRLLLVAAWVELSSI*RSLPWM
Trigger: CATCCAGGGCAATGACCTCAAGATTGATGAAAGCTC...CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATGGCTGGCGTCCACATaGCCATCCTGCATTTTACCA +
Preference number: 5 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGWLAST*PSCILP
Trigger: TGGTAAAATGCAGGATGGCAATGTGGACGCCAGCCA...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAAGCCAGCTTGGTGAGCTaGCCCTGCAGCACGGACTTC +
Preference number: 5 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKASLVS*PCSTDF
Trigger: GAAGTCCGTGCTGCAGGGCAAGCTCACCAAGCTGGC...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTAGGCAGCCACGGCTTCTaGTTGACCACGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLGSHGF*LTTKVS
Trigger: GGACACCTTCGTGGTCAACAAGAAGCCGTGGCTGCC...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAACCACTGTCATGCGATaGGTGGTCAGCGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: CASISKTHRPVDWINSLRTTVMR*VVSVPV
Trigger: GACAGGCACGCTGACCACCAATCGCATGACAGTGGT...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATCCATGGTCTTGGTGTaGATGGAGCTGGGGTCGGGG +
Preference number: 5 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLSMVLV*MELGSG
Trigger: CCCCGACCCCAGCTCCATCAACACCAAGACCATGGA...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACAATCTCAGAAGCCCCCTaGCTGTACATGCGGAAGCTC +
Preference number: 5 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTISEAP*LYMRKL
Trigger: GAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGAT...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCATTTTGCAGCACTTCTaGAGCACGATCTCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLILQHF*STISEA
Trigger: GGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAAT...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTATTTTGCAGCACTTCTaGAGCACGATCTCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVILQHF*STISEA
Trigger: GGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAAT...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCATTTTGCAGCACTTCTaGAGCACGATCTCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: VCGWKRWFSLQYLVSDCCILQHF*STISEA
Trigger: GGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAAT...GCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAGCTTTGGCCAGATCTaGTCAATTCGCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LRPCCASISKTHRPVDWISFGQI*SIRSCS
Trigger: TGAGCAGGAGCGAATTGACAAGATCTGGCCAAAGCT...TATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAGGGTATGCTTGTCCGTaGGGGAGGAGCGAGCCAGCA +
Preference number: 5 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLGYACP*GRSEPA
Trigger: TGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCC...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAATGTCTGAGGCCTCCTaGGCCACGTCAGTGCCTGCG +
Preference number: 5 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTMSEAS*ATSVPA
Trigger: CGCAGGCACTGACGTGGCCAAGGAGGCCTCAGACAT...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAGCCTCCTTGAGGAACTaGAGTCTGCTGGTCGGGATG +
Preference number: 5 (lower is better)
Translates to: CASISKTHRPVDWINSLRASLRN*SLLVGM
Trigger: CATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGC...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCCGCTCTTGAAAGTATaGACTACTTCAATCTGTGTC +
Preference number: 5 (lower is better)
Translates to: SNSIAARERVCGWKRWFSPLLKV*TTSICV
Trigger: GACACAGATTGAAGTAGTCAATACTTTCAAGAGCGG...AGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp AGCATTTGGCTTCTGCCTGAGCCTCTCACGGTAGTGACATTATTGAACGGAAATAAGGAGGCCCCGCTCTaGAAAGTATTGACTACTTCA +
Preference number: 5 (lower is better)
Translates to: SIWLLPEPLTVVTLLNGNKEAPL*KVLTTS
Trigger: TGAAGTAGTCAATACTTTCAAGAGCGGGGCCTCCTT...ATTTCCGTTCAATAATGTCACTACCGTGAGAGGCTCAGGCAGAAGCCAAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp CTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCAAGGAGGCCCCGCTCTaGAAAGTATTGACTACTTCA +
Preference number: 5 (lower is better)
Translates to: LWVETLVFSPVFGFRLLLKEAPL*KVLTTS
Trigger: TGAAGTAGTCAATACTTTCAAGAGCGGGGCCTCCTT...GAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAACTAGGGCTAGAGAGATaGGCTACATCCTGGCTCTGG +
Preference number: 5 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKLGLER*ATSWLW
Trigger: CCAGAGCCAGGATGTAGCCAATCTCTCTAGCCCTAG...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTGGAGAGGAAAGAGCATaGGACAACGACACGCGACTA +
Preference number: 5 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLGEERA*DNDTRL
Trigger: TAGTCGCGTGTCGTTGTCCAATGCTCTTTCCTCTCC...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAGGGCTCGAGTTCTGCTaGAGCGCGGCATCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: ASISKTHRPVDWINSLRKGLEFC*SAASSS
Trigger: GGAAGAAGATGCCGCGCTCAAGCAGAACTCGAGCCC...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTAGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAGTTGCTCGTTGCTGCTaGGGTGAGTTGGGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKVARCC*GELGAW
Trigger: CCAGGCACCCAACTCACCCAAGCAGCAACGAGCAAC...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: RVCGWKRWFSLQYLVSDCVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...ACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: GSVGGNVGFLSSIWFPIVVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...AACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 5 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 5 (lower is better)
Translates to: IAARERVCGWKRWFSLQYQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...ATACTGGAGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTTCAAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 5 (lower is better)
Translates to: VQTASQPEKGSVGGNVGFQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...AAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAACAGCATCGCAGCCAGAGAAAGGGTCTGTGGGTGGAAACGTTGGTTTTCTCTCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 5 (lower is better)
Translates to: KQHRSQRKGLWVETLVFSQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...AGAGAAAACCAACGTTTCCACCCACAGACCCTTTCTCTGGCTGCGATGCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AGTGGAGATCCCGCCCCTTGCCTTGAAGTGAAAAAGAGTTCAAACAGCATCGCACAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 5 (lower is better)
Translates to: SGDPAPCLEVKKSSNSIAQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...TGCGATGCTGTTTGAACTCTTTTTCACTTCAAGGCAAGGGGCGGGATCTCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCACAGGGGAAGTGTCTGTaGGGCCGAGCTGTTTTTATA +
Preference number: 5 (lower is better)
Translates to: RKVFGFPRSMGHHRSWYSQGKCL*GRAVFI
Trigger: TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTG...TGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGTGCAAACACAGCTATCCTGATGTCATGGAACGAGGTCACGGACACATGACTACGGTAGTGACATTATaGAACGGAAATAGCAGGCAA +
Preference number: 5 (lower is better)
Translates to: VCKHSYPDVMERGHGHMTTVVTL*NGNSRQ
Trigger: TTGCCTGCTATTTCCGTTCAATAATGTCACTACCGT...AGTCATGTGTCCGTGACCTCGTTCCATGACATCAGGATAGCTGTGTTTGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGCGTCTACGGAGCATGTaGTTAAACCCCTCAGGATGG +
Preference number: 5 (lower is better)
Translates to: SIQLRPCCASISKTHRPVRLRSM*LNPSGW
Trigger: CCATCCTGAGGGGTTTAACAACATGCTCCGTAGACG...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTTGGCTCTCATCTTGTTaGTGGAAGAGTTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAWLSSC*WKSSLG
Trigger: GCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCA...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTTGTAGGCCCTCCCAGTaGACTATGGCTCTTTTCCCG +
Preference number: 5 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSCRPSQ*TMALFP
Trigger: CGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTACA...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCCAGGGGTGGTGGCTCTaGGCTATGAAAATCACCACC +
Preference number: 5 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCQGWWL*AMKITT
Trigger: GGTGGTGATTTTCATAGCCAAGAGCCACCACCCCTG...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR CAA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCCCCTTCCCTCATCTGTaGAGGGGGAGACAAGTTGGT +
Preference number: 5 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCPFPHL*RGRQVG
Trigger: ACCAACTTGTCTCCCCCTCAACAGATGAGGGAAGGG...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAAGGAGGTCACCATATTaGACCTGGGCTATGTCCCCA +
Preference number: 5 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKRRSPY*TWAMSP
Trigger: TGGGGACATAGCCCAGGTCAAATATGGTGACCTCCT...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTTCCTGCATTTTACCATaGACTAGGCTGGCATTCGCA +
Preference number: 5 (lower is better)
Translates to: VETLVFSPVFGFRLLLVASCILP*TRLAFA
Trigger: TGCGAATGCCAGCCTAGTCAATGGTAAAATGCAGGA...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACAACGGACTTCTCCTTCTaGTGCATGCTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTTDFSF*CMLAFF
Trigger: GAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGT...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTACGGACTTCTCCTTCTaGTGCATGCTGGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCTDFSF*CMLAFF
Trigger: GAAGAAGGCCAGCATGCACAAGAAGGAGAAGTCCGT...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAAGCCACGGCTTCTTGTaGACCACGAAGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: STLPQSLYRQCQREPIFESHGFL*TTKVST
Trigger: TGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGCT...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAGGCAGCCACGGCTTCTaGTTGACCACGAAGGTGTCC +
Preference number: 5 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLGSHGF*LTTKVS
Trigger: GGACACCTTCGTGGTCAACAAGAAGCCGTGGCTGCC...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGAACCACTGTCATGCGATaGGTGGTCAGCGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: VFIASQPPVFLNHTNSQRTTVMR*VVSVPV
Trigger: GACAGGCACGCTGACCACCAATCGCATGACAGTGGT...TCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAACCACTGTCATGCGATaGGTGGTCAGCGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKTTVMR*VVSVPV
Trigger: GACAGGCACGCTGACCACCAATCGCATGACAGTGGT...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAATTGATGGCGATGGCATaGATCAGCAGCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: ESVWFSSKHGTSSIMVFKLMAMA*ISSSMV
Trigger: GACCATGGAGCTGCTGATCAATGCCATCGCCATCAA...TTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCTTGATGGCGATGGCATaGATCAGCAGCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCLMAMA*ISSSMV
Trigger: GACCATGGAGCTGCTGATCAATGCCATCGCCATCAA...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTTAAACCACAAACATTTCAGAACCACACTGCACGAGTCAGAAGAGCCAGCGATATTTTGCAGCACTTCTaGAGCACGATCTCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: FKPQTFQNHTARVRRASDILQHF*STISEA
Trigger: GGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAAT...ATCGCTGGCTCTTCTGACTCGTGCAGTGTGGTTCTGAAATGTTTGTGGTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCGCCCCATTGAGGATTTaGCAGCACTTCTTGAGCACG +
Preference number: 5 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCAPLRI*QHFLST
Trigger: CGTGCTCAAGAAGTGCTGCAAAATCCTCAATGGGGC...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTAAGGATGTCATTCTCATaGTCCCAGTCCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLRMSFS*SQSGSG
Trigger: CCCGGAGCCGGACTGGGACAATGAGAATGACATCCT...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACATGGATGATGCCACACTaGATGGCGATGGCCCGAGCC +
Preference number: 5 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTWMMPH*MAMARA
Trigger: GGCTCGGGCCATCGCCATCAAGTGTGGCATCATCCA...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGAAGCTTTGGCCAGATCTaGTCAATTCGCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGSFGQI*SIRSCS
Trigger: TGAGCAGGAGCGAATTGACAAGATCTGGCCAAAGCT...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTAGCTTTGGCCAGATCTaGTCAATTCGCTCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLSFGQI*SIRSCS
Trigger: TGAGCAGGAGCGAATTGACAAGATCTGGCCAAAGCT...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAGCGCTGTTGTTCTTGTaGAGGGATGACGGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLALLFL*RDDGGL
Trigger: GAGCCCGCCGTCATCCCTCAACAAGAACAACAGCGC...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GTGTTTGGTTTTCCTCGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: VFGFPRSMGHHRSWYSKCEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...ACATTTTGAATACCATGATCGATGATGTCCCATGCTTCGAGGAAAACCAAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: VETLVFSPVFGFRLLLVAVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAGAACTGCCTGCATCCCAAAGGTACTGGAGACTCCAAATTAAAGAGCAAGAAACAGGGGAAGTGTCTGTaGGGCCGAGCTGTTTTTATA +
Preference number: 5 (lower is better)
Translates to: KNCLHPKGTGDSKLKSKKQGKCL*GRAVFI
Trigger: TATAAAAACAGCTCGGCCCAACAGACACTTCCCCTG...TTTCTTGCTCTTTAATTTGGAGTCTCCAGTACCTTTGGGATGCAGGCAGTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACACAGATCCTGGCATCCTaGGGCCGGATGGCCGTTAGT +
Preference number: 5 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTQILAS*GRMAVS
Trigger: ACTAACGGCCATCCGGCCCAAGGATGCCAGGATCTG...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGTCTTCGAGCAGTGCTTaGCAGATCCTGGCATCCTTG +
Preference number: 5 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQSSSSA*QILASL
Trigger: CAAGGATGCCAGGATCTGCAAAGCACTGCTCGAAGA...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTTTGCAAGAGAGGCGGAAAGTGTTTGGTTTTCCTCGAAGCATGGGACATCATCCTCAAGCGAGTTTCATaGAGAGAAAAGTCTTCGAGC +
Preference number: 5 (lower is better)
Translates to: FCKRGGKCLVFLEAWDIILKRVS*REKSSS
Trigger: GCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAG...GATGATGTCCCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCTCTTGCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGTGGCTCTCATCTTGTTaGTGGAAGAGTTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: SIQLRPCCASISKTHRPVWLSSC*WKSSLG
Trigger: GCCCAGAGAACTCTTCCACAAACAAGATGAGAGCCA...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TCTGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTTGGCTTTGGTGGCGTTaGTACTGGAATCCAATAAGC +
Preference number: 5 (lower is better)
Translates to: SVGGNVGFLSSIWFPIVAWLWWR*YWNPIS
Trigger: GCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA...AGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGACAGGGGTGGTGGCTCTaGGCTATGAAAATCACCACC +
Preference number: 5 (lower is better)
Translates to: CASISKTHRPVDWINSLRQGWWL*AMKITT
Trigger: GGTGGTGATTTTCATAGCCAAGAGCCACCACCCCTG...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000643662.1
CDS-3UTR CAA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGAGAGCTTTCATCAATCTaGAGGTCATTGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGELSSI*RSLPWM
Trigger: CATCCAGGGCAATGACCTCAAGATTGATGAAAGCTC...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAACACTATCTGCAGCATTaGAAGCTGCCGCACCGTCTG +
Preference number: 5 (lower is better)
Translates to: ASISKTHRPVDWINSLRKHYLQH*KLPHRL
Trigger: CAGACGGTGCGGCAGCTTCAAATGCTGCAGATAGTG...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGTCCTGCATTTTACCATaGACTAGGCTGGCATTCGCA +
Preference number: 5 (lower is better)
Translates to: SIQLRPCCASISKTHRPVSCILP*TRLAFA
Trigger: TGCGAATGCCAGCCTAGTCAATGGTAAAATGCAGGA...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAATCCTGTTGTTTGGCTTaGCTCTGGCTGGCGTCCACA +
Preference number: 5 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKSCCLA*LWLAST
Trigger: TGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGGA...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000452124.2
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
CDS-3UTR CAA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAAGCCACGGCTTCTTGTaGACCACGAAGGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: ASISKTHRPVDWINSLRKSHGFL*TTKVST
Trigger: TGTGGACACCTTCGTGGTCAACAAGAAGCCGTGGCT...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAACCACTGTCATGCGATaGGTGGTCAGCGTGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTTTVMR*VVSVPV
Trigger: GACAGGCACGCTGACCACCAATCGCATGACAGTGGT...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAGGCTCTCCCGCCCCATaGAGGATTTTGCAGCACTTC +
Preference number: 5 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLGSPAP*RILQHF
Trigger: GAAGTGCTGCAAAATCCTCAATGGGGCGGGAGAGCC...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAAGGATGTCATTCTCATaGTCCCAGTCCGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTRMSFS*SQSGSG
Trigger: CCCGGAGCCGGACTGGGACAATGAGAATGACATCCT...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAATCTCCCCCTTCTCGTaGCGGATCCTCCTGTTGAAC +
Preference number: 5 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLISPFS*RILLLN
Trigger: GTTCAACAGGAGGATCCGCAACGAGAAGGGGGAGAT...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAAAGCCTGCCTGCCTCCTaGAGGAACTTGAGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKSLPAS*RNLSLL
Trigger: CAGCAGACTCAAGTTCCTCAAGGAGGCAGGCAGGCT...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGCCGCTCTTGAAAGTATaGACTACTTCAATCTGTGTC +
Preference number: 5 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSPLLKV*TTSICV
Trigger: GACACAGATTGAAGTAGTCAATACTTTCAAGAGCGG...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS-3UTR CAA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTAATGGCGCTGTTGTTCTaGTTGAGGGATGACGGCGGG +
Preference number: 5 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLMALLF*LRDDGG
Trigger: CCCGCCGTCATCCCTCAACAAGAACAACAGCGCCAT...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTTTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAGGAGCCAGGAAGGGCTaGTTTTGGGAAAACCGCTCA +
Preference number: 5 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLGARKG*FWENRS
Trigger: TGAGCGGTTTTCCCAAAACAAGCCCTTCCTGGCTCC...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CTGTTGGGCCGAGCTGTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 5 (lower is better)
Translates to: LLGRAVFIASQPPVFLNHQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...ATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAACAGCTCGGCCCAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 5 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 5 (lower is better)
Translates to: VGGNVGFLSSIWFPIVARQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...ACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TGTGGGTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGACGGTAGTGACATTATaGAACGGAAATAGCAGGCAA +
Preference number: 5 (lower is better)
Translates to: CGWKRWFSLQYLVSDCCSTVVTL*NGNSRQ
Trigger: TTGCCTGCTATTTCCGTTCAATAATGTCACTACCGT...CGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCACCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTACAGAGAGGCGGAAAGTGTTaGGTTTTCCTCGAAGCATGG +
Preference number: 5 (lower is better)
Translates to: SQPPVFLNHTNSQRRYLQRGGKC*VFLEAW
Trigger: CCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCT...CTGTAGATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGACGAGTGGCTCTCATCTaGTTTGTGGAAGAGTTCTCT +
Preference number: 5 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGRVALI*FVEEFS
Trigger: AGAGAACTCTTCCACAAACAAGATGAGAGCCACTCG...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAATGTAGGCCCTCCCAGTaGACTATGGCTCTTTTCCCG +
Preference number: 5 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKCRPSQ*TMALFP
Trigger: CGGGAAAAGAGCCATAGTCAACTGGGAGGGCCTACA...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATTGGGATGGGCTGACTTaGAACCCCAAACCCTCAAGT +
Preference number: 5 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYWDGLT*NPKPSS
Trigger: ACTTGAGGGTTTGGGGTTCAAAGTCAGCCCATCCCA...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAAGCAGTGGGCTGGCTTaGGTGGCGTTTGTACTGGAA +
Preference number: 5 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLSSGLA*VAFVLE
Trigger: TTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCT...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAAGCAGTGGGCTGGCTTaGGTGGCGTTTGTACTGGAA +
Preference number: 5 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKSSGLA*VAFVLE
Trigger: TTCCAGTACAAACGCCACCAAAGCCAGCCCACTGCT...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCGCTCGACTCATTTCTTaGGTTTTTGGAGTAAAAGTC +
Preference number: 5 (lower is better)
Translates to: GNVGFLSSIWFPIVARCCARLIS*VFGVKV
Trigger: GACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGC...GCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACAATTTTGCAGCACTTCTaGAGCACGATCTCAGAAGCC +
Preference number: 5 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTILQHF*STISEA
Trigger: GGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAAAAT...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAACTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 5 (lower is better)
Translates to: ASISKTHRPVDWINSLRKLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAACTGTCGATGGCGCTGTaGTTCTTGTTGAGGGATGAC +
Preference number: 5 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKLSMAL*FLLRDD
Trigger: GTCATCCCTCAACAAGAACAACAGCGCCATCGACAG...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTGGAAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTACGGTAGTGACATTATaGAACGGAAATAGCAGGCAA +
Preference number: 5 (lower is better)
Translates to: VETLVFSPVFGFRLLLVATVVTL*NGNSRQ
Trigger: TTGCCTGCTATTTCCGTTCAATAATGTCACTACCGT...AGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAGAGGCGGAAAGTGTTaGGTTTTCCTCGAAGCATGG +
Preference number: 5 (lower is better)
Translates to: CASISKTHRPVDWINSLRRGGKC*VFLEAW
Trigger: CCATGCTTCGAGGAAAACCAAACACTTTCCGCCTCT...TCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATAATATTTCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTAATCTCTATGCTATGGTaGGGACAAGGGGACAAGGGG +
Preference number: 5 (lower is better)
Translates to: IIFQHYLNLCTDSAKENLISMLW*GQGDKG
Trigger: CCCCTTGTCCCCTTGTCCCAACCATAGCATAGAGAT...TAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGAAATATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp GGAGGCGGCACCATTCCCTCGCTACTCTATTATAAAATATGTGCACACAAGAGTCCACGTGTGCATTTATaGTTATTGCTCAGTATAGTG +
Preference number: 5 (lower is better)
Translates to: GGGTIPSLLYYKICAHKSPRVHL*LLLSIV
Trigger: CACTATACTGAGCAATAACAATAAATGCACACGTGG...ACTCTTGTGTGCACATATTTTATAATAGAGTAGCGAGGGAATGGTGCCGCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp TCAACACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAGAGCTTTCATCAATCTaGAGGTCATTGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: STLPQSLYRQCQREPIFEELSSI*RSLPWM
Trigger: CATCCAGGGCAATGACCTCAAGATTGATGAAAGCTC...TTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTGTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACATTGATGGCGATGGCATaGATCAGCAGCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTLMAMA*ISSSMV
Trigger: GACCATGGAGCTGCTGATCAATGCCATCGCCATCAA...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CCTATCTATATGGACGTATACAGTCTCGGAAAAGTATACGTTGATATAGATACAGAAGAGGTAGCTGATTaGCTTGTGTCGGTCGTCAGG +
Preference number: 5 (lower is better)
Translates to: PIYMDVYSLGKVYVDIDTEEVAD*LVSVVR
Trigger: CCTGACGACCGACACAAGCAAATCAGCTACCTCTTC...TGTATCTATATCAACGTATACTTTTCCGAGACTGTATACGTCCATATAGATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAATTTGGTTTCCGATTGTaGCTCGTTGCTGCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKFGFRL*LVAAWV
Trigger: CACCCAAGCAGCAACGAGCAACAATCGGAAACCAAA...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp TCTATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGCAAACAAGGGGAGGATaGAAAGTGTACAGTACATTC +
Preference number: 5 (lower is better)
Translates to: SIQLRPCCASISKTHRPVQTRGG*KVYSTF
Trigger: GAATGTACTGTACACTTTCAATCCTCCCCTTGTTTG...CACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp AAACGTTGGTTTTCTCTCCAGTATTTGGTTTCCGATTGTTGCTCGTTGCTGCTTACGGTAGTGACATTATaGAACGGAAATAGCAGGCAA +
Preference number: 5 (lower is better)
Translates to: KRWFSLQYLVSDCCSLLLTVVTL*NGNSRQ
Trigger: TTGCCTGCTATTTCCGTTCAATAATGTCACTACCGT...AAGCAGCAACGAGCAACAATCGGAAACCAAATACTGGAGAGAAAACCAACGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTACCAAGGTGGGTGACTTaGGTTCCCAAGCTGAGATTG +
Preference number: 5 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLPRWVT*VPKLRL
Trigger: CAATCTCAGCTTGGGAACCAAAGTCACCCACCTTGG...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTAAAGCAGCCTCCAATATaGTTTTCAGTGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLKQPPI*FSVEGV
Trigger: CACCCCCTCCACTGAAAACAATATTGGAGGCTGCTT...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp TATACAACTGAGACCATGCTGTGCAAGCATTTCAAAAACTCACAGACCAGTGGATTGCTCAGTATAGTGTaGAAAAGGCAGACAAATCCC +
Preference number: 5 (lower is better)
Translates to: YTTETMLCKHFKNSQTSGLLSIV*KRQTNP
Trigger: GGGATTTGTCTGCCTTTTCAACACTATACTGAGCAA...TCCACTGGTCTGTGAGTTTTTGAAATGCTTGCACAGCATGGTCTCAGTTGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp AAACTCAAGCGAGTTTCATTGAGAGAAAAGTCTTCGAGCAGTGCTTTGCAGATCTTGCTCAGTATAGTGTaGAAAAGGCAGACAAATCCC +
Preference number: 5 (lower is better)
Translates to: KLKRVSLREKSSSSALQILLSIV*KRQTNP
Trigger: GGGATTTGTCTGCCTTTTCAACACTATACTGAGCAA...GATCTGCAAAGCACTGCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CAGAAAAGAGTCTGTTTGCAGTTCCCGCCTAAGAAAACAAACAAACAAACAAAAGAGCTTTCATCAATCTaGAGGTCATTGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: QKRVCLQFPPKKTNKQTKELSSI*RSLPWM
Trigger: CATCCAGGGCAATGACCTCAAGATTGATGAAAGCTC...TTTTGTTTGTTTGTTTGTTTTCTTAGGCGGGAACTGCAAACAGACTCTTTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GCAAGCATTTCAAAAACTCACAGACCAGTGGATTGGATAAATAGTCTCAGAAAAGAGCTTTCATCAATCTaGAGGTCATTGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: ASISKTHRPVDWINSLRKELSSI*RSLPWM
Trigger: CATCCAGGGCAATGACCTCAAGATTGATGAAAGCTC...TTTTCTGAGACTATTTATCCAATCCACTGGTCTGTGAGTTTTTGAAATGCTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp GTTTTTATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGAGTATTTGGTTTCCGATaGTTGCTCGTTGCTGCTTGG +
Preference number: 5 (lower is better)
Translates to: VFIASQPPVFLNHTNSQRVFGFR*LLVAAW
Trigger: CCAAGCAGCAACGAGCAACAATCGGAAACCAAATAC...TCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTATAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CGAAGCATGGGACATCATCGATCATGGTATTCAAAATGTCTTTTGCACTGTACAACGGTAGTGACATTATaGAACGGAAATAGCAGGCAA +
Preference number: 5 (lower is better)
Translates to: RSMGHHRSWYSKCLLHCTTVVTL*NGNSRQ
Trigger: TTGCCTGCTATTTCCGTTCAATAATGTCACTACCGT...TGTACAGTGCAAAAGACATTTTGAATACCATGATCGATGATGTCCCATGCTTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ATAGCATCTCAGCCACCAGTGTTCTTAAACCATACAAATAGCCAAAGACGTTATCTCAAGCGAGTTTCATaGAGAGAAAAGTCTTCGAGC +
Preference number: 5 (lower is better)
Translates to: IASQPPVFLNHTNSQRRYLKRVS*REKSSS
Trigger: GCTCGAAGACTTTTCTCTCAATGAAACTCGCTTGAG...ATAACGTCTTTGGCTATTTGTATGGTTTAAGAACACTGGTGGCTGAGATGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAAGACCAACGCTAATGTaGGCATTCTTCCATCGCTCC +
Preference number: 5 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTRPTLM*AFFHRS
Trigger: GGAGCGATGGAAGAATGCCAACATTAGCGTTGGTCT...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp TTCCATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATCTAATGGTGGGATTTaGGACACAATGGCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: FHWCKSTRRVKLCNFKKLSNGGI*DTMAGE
Trigger: CTCTCCTGCCATTGTGTCCAAAATCCCACCATTAGA...TAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp ACATTATTGAACGGAAATAGCAGGCAAAAATCAGAGCATGGCTATCATAAAACAAAGCAGCCTCCAATATaGTTTTCAGTGGAGGGGGTG +
Preference number: 5 (lower is better)
Translates to: TLLNGNSRQKSEHGYHKTKQPPI*FSVEGV
Trigger: CACCCCCTCCACTGAAAACAATATTGGAGGCTGCTT...TGTTTTATGATAGCCATGCTCTGATTTTTGCCTGCTATTTCCGTTCAATAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp GGATATAACCTTGTGAGTGTCTATGAAGTTCTTCGGTTCCATTGGTGCAAATCTGCTCGACTCATTTCTTaGGTTTTTGGAGTAAAAGTC +
Preference number: 5 (lower is better)
Translates to: GYNLVSVYEVLRFHWCKSARLIS*VFGVKV
Trigger: GACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGC...AGATTTGCACCAATGGAACCGAAGAACTTCATAGACACTCACAAGGTTATATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS-3UTR CAA 90 bp CACTACCTCAATCTCTGTACAGACAGTGCCAAAGAGAACCTATTTTTGAAATGCGCTCGACTCATTTCTTaGGTTTTTGGAGTAAAAGTC +
Preference number: 5 (lower is better)
Translates to: HYLNLCTDSAKENLFLKCARLIS*VFGVKV
Trigger: GACTTTTACTCCAAAAACCAAAGAAATGAGTCGAGC...GCATTTCAAAAATAGGTTCTCTTTGGCACTGTCTGTACAGAGATTGAGGTAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000643662.1
CDS-3UTR CAA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTATGGCTTTGGTGGCGTTaGTACTGGAATCCAATAAGC +
Preference number: 5 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLWLWWR*YWNPIS
Trigger: GCTTATTGGATTCCAGTACAAACGCCACCAAAGCCA...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000467702.3
ENST00000643662.1
ENST00000644553.1
CDS-3UTR CAA 90 bp CATTGGTGCAAATCTACTAGGCGAGTTAAGCTCTGCAATTTCAAAAAGTTATTATTACTCCTGGAGCCCTaGTCTAGAGGACAGAAAAGA +
Preference number: 5 (lower is better)
Translates to: HWCKSTRRVKLCNFKKLLLLLEP*SRGQKR
Trigger: TCTTTTCTGTCCTCTAGACAAGGGCTCCAGGAGTAA...TAATAACTTTTTGAAATTGCAGAGCTTAACTCGCCTAGTAGATTTGCACCAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
CDS-3UTR CAA 90 bp CAATTAAATAAGCTCTTATTAAGTGGGATTACTAGTGCTGTTGTCTTGGGGAAACCGCTCTTGAAAGTATaGACTACTTCAATCTGTGTC +
Preference number: 5 (lower is better)
Translates to: QLNKLLLSGITSAVVLGKPLLKV*TTSICV
Trigger: GACACAGATTGAAGTAGTCAATACTTTCAAGAGCGG...TTTCCCCAAGACAACAGCACTAGTAATCCCACTTAATAAGAGCTTATTTAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
CDS CCA 72 bp GCGGTCCTTGCTCGGGCTGGGCCCAAGGGTCAGCGCTaGACAAGAGGCTGCCGGGTGATGGCTGCTTGTGGC +
Preference number: 6 (lower is better)
Translates to: AVLARAGPKGQR*TRGCRVMAACG
Trigger: GCCACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGGCCCAGCCCGAGCAAGGACCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS GCA 72 bp CGGGCTGGGCCCAAGGGTCAGCGCTGGACAAGAGGCTaGCGGGTGATGGCTGCTTGTGGCTGTCCTCAGCAC +
Preference number: 6 (lower is better)
Translates to: RAGPKGQRWTRG*RVMAACGCPQH
Trigger: GTGCTGAGGACAGCCACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGGCCCAGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS CCA 72 bp ACAGTGGTGGTGAGCTCCAAGAGGTGTCCTCCGGTGTaGGACGAGGTCCAGGGGCCGGAGGGGCTCAGGGCT +
Preference number: 6 (lower is better)
Translates to: TVVVSSKRCPPV*DEVQGPEGLRA
Trigger: AGCCCTGAGCCCCTCCGGCCCCTGGACCTCGTCCCACACCGGAGGACACCTCTTGGAGCTCACCACCACTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000646379.1
CDS GCA 72 bp GTGAGAACTGGGCACGGTGGAGGGTCTAACTCGTCCTaGATGAGCCTGGCCCGTGGCTGGCCCTCGGTTCTC +
Preference number: 6 (lower is better)
Translates to: VRTGHGGGSNSS*MSLARGWPSVL
Trigger: GAGAACCGAGGGCCAGCCACGGGCCAGGCTCATGCAGGACGAGTTAGACCCTCCACCGTGCCCAGTTCTCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467702.3
CDS CAA 90 bp GCCCAAGGGTCAGCGCTGGACAAGAGGCTGCCGGGTGATGGCTGCTaGTGGCTGTCCTCAGCACACCCTCACTGGTCAGCTGTGGCACCA +
Preference number: 6 (lower is better)
Translates to: AQGSALDKRLPGDGC*WLSSAHPHWSAVAP
Trigger: TGGTGCCACAGCTGACCAGTGAGGGTGTGCTGAGGACAGCCACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCGCTGACCCTTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS CCA 72 bp CGACTAGGGCTAGAGAGATTGGCTACATCCTGGCTCTaGCTGGTGACCGAGGACTGTCTCCGCAGGGCCCCC +
Preference number: 6 (lower is better)
Translates to: RLGLERLATSWL*LVTEDCLRRAP
Trigger: GGGGGCCCTGCGGAGACAGTCCTCGGTCACCAGCCAGAGCCAGGATGTAGCCAATCTCTCTAGCCCTAGTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS GCA 72 bp GCTGTTGGTCATGTCACCCATGTTTGCTGCGGTCCTTaGTCGGGCTGGGCCCAAGGGTCAGCGCTGGACAAG +
Preference number: 6 (lower is better)
Translates to: AVGHVTHVCCGP*SGWAQGSALDK
Trigger: CTTGTCCAGCGCTGACCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGACATGACCAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS CAA 72 bp TCAGCGCTGGACAAGAGGCTGCCGGGTGATGGCTGCTaGTGGCTGTCCTCAGCACACCCTCACTGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: SALDKRLPGDGC*WLSSAHPHWSA
Trigger: AGCTGACCAGTGAGGGTGTGCTGAGGACAGCCACAAGCAGCCATCACCCGGCAGCCTCTTGTCCAGCGCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000644807.1
ENST00000646379.1
CDS TCA 72 bp GAGCGGTGCCCGGCAAACCTTCAACAGGTGAGGTTTTaGGGCGCCGGCAGATGGCTTCGGTGTCCCCATAAG +
Preference number: 6 (lower is better)
Translates to: ERCPANLQQVRF*GAGRWLRCPHK
Trigger: CTTATGGGGACACCGAAGCCATCTGCCGGCGCCTCAAAACCTCACCTGTTGAAGGTTTGCCGGGCACCGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000480680.2
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS CCA 72 bp TTCTCTAGCCCTGCCCGGCTGCAGCAGGAGGAAGGCTaGTCGGAGAGGAAAGAGCATTGGACAACGACACGC +
Preference number: 6 (lower is better)
Translates to: FSSPARLQQEEG*SERKEHWTTTR
Trigger: GCGTGTCGTTGTCCAATGCTCTTTCCTCTCCGACCAGCCTTCCTCCTGCTGCAGCCGGGCAGGGCTAGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000643662.1
ENST00000644807.1
CDS CCA 72 bp CAGGAGTCTCCATTCAGTGGGGCCCATGCTGCTCCCTaGAACTGGCATCTACATGGTCAGGGGTGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: QESPFSGAHAAP*NWHLHGQGWWL
Trigger: GAGCCACCACCCCTGACCATGTAGATGCCAGTTCCAGGGAGCAGCATGGGCCCCACTGAATGGAGACTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000646379.1
CDS CCA 72 bp GGGCTCAGGGCTGTAGACCCAGGAGTCTCCATTCAGTaGGGCCCATGCTGCTCCCTGGAACTGGCATCTACA +
Preference number: 6 (lower is better)
Translates to: GLRAVDPGVSIQ*GPCCSLELAST
Trigger: TGTAGATGCCAGTTCCAGGGAGCAGCATGGGCCCCACTGAATGGAGACTCCTGGGTCTACAGCCCTGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000643662.1
ENST00000646379.1
CDS CCA 72 bp GGGTCTAACTCGTCCTGCATGAGCCTGGCCCGTGGCTaGCCCTCGGTTCTCCTGGGGTTACTTATTCCTCTG +
Preference number: 6 (lower is better)
Translates to: GSNSSCMSLARG*PSVLLGLLIPL
Trigger: CAGAGGAATAAGTAACCCCAGGAGAACCGAGGGCCAGCCACGGGCCAGGCTCATGCAGGACGAGTTAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467702.3
CDS CAA 90 bp TCCGTTGGGGAGGAGCGAGCCAGCACCCGCAGCTTTGGCCAGATCTaGTCAATTCGCTCCTGCTCAATCTCCCCCTTCTCGTTGCGGATC +
Preference number: 6 (lower is better)
Translates to: SVGEERASTRSFGQI*SIRSCSISPFSLRI
Trigger: GATCCGCAACGAGAAGGGGGAGATTGAGCAGGAGCGAATTGACAAGATCTGGCCAAAGCTGCGGGTGCTGGCTCGCTCCTCCCCAACGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS TCA 72 bp TCATCATTTTCTTCACCGAATAGGCCAACGAGATGGTaGCGGCCAGAGGGAGCCCCTCGGGCACGGCGACCA +
Preference number: 6 (lower is better)
Translates to: SSFSSPNRPTRW*RPEGAPRARRP
Trigger: TGGTCGCCGTGCCCGAGGGGCTCCCTCTGGCCGTCACCATCTCGTTGGCCTATTCGGTGAAGAAAATGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS TCA 72 bp ACTGGGGCCCATGTCTTGCTGGCTCTAGGGACTGGGTaGCGAAGTTCAGCTCGTCTGCTTGGGGGTTCACAG +
Preference number: 6 (lower is better)
Translates to: TGAHVLLALGTG*RSSARLLGGSQ
Trigger: CTGTGAACCCCCAAGCAGACGAGCTGAACTTCGTCACCCAGTCCCTAGAGCCAGCAAGACATGGGCCCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646379.1
CDS GCA 72 bp GTGTGTGTGCTGTCGATGATGCCTTTAACCAGGGTATaGTTGTCCGTTGGGGAGGAGCGAGCCAGCACCCGC +
Preference number: 6 (lower is better)
Translates to: VCVLSMMPLTRV*LSVGEERASTR
Trigger: GCGGGTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGGCATCATCGACAGCACACACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS GCA 72 bp CTCCTCCGGGATCTCCTCCTTCTGTGTGAGCCTGCCTaGCTCCTTGAGGAACTTGAGTCTGCTGGTCGGGAT +
Preference number: 6 (lower is better)
Translates to: LLRDLLLLCEPA*LLEELESAGRD
Trigger: ATCCCGACCAGCAGACTCAAGTTCCTCAAGGAGGCAGGCAGGCTCACACAGAAGGAGGAGATCCCGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000467702.3
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS GCA 72 bp GTAAAAGTCGCTGTTGGTCATGTCACCCATGTTTGCTaGGGTCCTTGCTCGGGCTGGGCCCAAGGGTCAGCG +
Preference number: 6 (lower is better)
Translates to: VKVAVGHVTHVC*GPCSGWAQGSA
Trigger: CGCTGACCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGACATGACCAACAGCGACTTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS CCA 72 bp TCTCCATTCAGTGGGGCCCATGCTGCTCCCTGGAACTaGCATCTACATGGTCAGGGGTGGTGGCTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: SPFSGAHAAPWN*HLHGQGWWLLA
Trigger: AGCCAAGAGCCACCACCCCTGACCATGTAGATGCCAGTTCCAGGGAGCAGCATGGGCCCCACTGAATGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000480680.2
ENST00000643662.1
CDS CCA 72 bp GGAAACTGGGGCCCATGTCTTGCTGGCTCTAGGGACTaGGTGACGAAGTTCAGCTCGTCTGCTTGGGGGTTC +
Preference number: 6 (lower is better)
Translates to: GNWGPCLAGSRD*VTKFSSSAWGF
Trigger: GAACCCCCAAGCAGACGAGCTGAACTTCGTCACCCAGTCCCTAGAGCCAGCAAGACATGGGCCCCAGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646379.1
CDS CAA 72 bp TGTGTGCTGTCGATGATGCCTTTAACCAGGGTATGCTaGTCCGTTGGGGAGGAGCGAGCCAGCACCCGCAGC +
Preference number: 6 (lower is better)
Translates to: CVLSMMPLTRVC*SVGEERASTRS
Trigger: GCTGCGGGTGCTGGCTCGCTCCTCCCCAACGGACAAGCATACCCTGGTTAAAGGCATCATCGACAGCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS CAA 72 bp GAGTCTGCTGGTCGGGATGGTGGCGATGACCGAGCTTaGGTTTTCCTAGCTGTAAAGTGGGGGCCGCTCTGG +
Preference number: 6 (lower is better)
Translates to: ESAGRDGGDDRA*VFLAVKWGPLW
Trigger: CCAGAGCGGCCCCCACTTTACAGCTAGGAAAACCAAAGCTCGGTCATCGCCACCATCCCGACCAGCAGACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467702.3
CDS CAA 90 bp GAGGAAAGAGCATTGGACAACGACACGCGACTAGGGCTAGAGAGATaGGCTACATCCTGGCTCTGGCTGGTGACCGAGGACTGTCTCCGC +
Preference number: 6 (lower is better)
Translates to: EERALDNDTRLGLER*ATSWLWLVTEDCLR
Trigger: GCGGAGACAGTCCTCGGTCACCAGCCAGAGCCAGGATGTAGCCAATCTCTCTAGCCCTAGTCGCGTGTCGTTGTCCAATGCTCTTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS GCA 72 bp GGAGTAAAAGTCGCTGTTGGTCATGTCACCCATGTTTaGTGCGGTCCTTGCTCGGGCTGGGCCCAAGGGTCA +
Preference number: 6 (lower is better)
Translates to: GVKVAVGHVTHV*CGPCSGWAQGS
Trigger: TGACCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGACATGACCAACAGCGACTTTTACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS CCA 72 bp GGACAAGACCTGGAGATGGAACAGACAGAGCCTACCTaGCCCATGCAGGCCTTAAGGATGCAGGAGGTGGCT +
Preference number: 6 (lower is better)
Translates to: GQDLEMEQTEPT*PMQALRMQEVA
Trigger: AGCCACCTCCTGCATCCTTAAGGCCTGCATGGGCCAGGTAGGCTCTGTCTGTTCCATCTCCAGGTCTTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480680.2
CDS CAA 72 bp GCATTGGACAACGACACGCGACTAGGGCTAGAGAGATaGGCTACATCCTGGCTCTGGCTGGTGACCGAGGAC +
Preference number: 6 (lower is better)
Translates to: ALDNDTRLGLER*ATSWLWLVTED
Trigger: GTCCTCGGTCACCAGCCAGAGCCAGGATGTAGCCAATCTCTCTAGCCCTAGTCGCGTGTCGTTGTCCAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS CAA 72 bp TGGAGTAAAAGTCGCTGTTGGTCATGTCACCCATGTTaGCTGCGGTCCTTGCTCGGGCTGGGCCCAAGGGTC +
Preference number: 6 (lower is better)
Translates to: WSKSRCWSCHPC*LRSLLGLGPRV
Trigger: GACCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGACATGACCAACAGCGACTTTTACTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS CCA 72 bp ACATGGTCAGGGGTGGTGGCTCCCCTCCACGTCTTCTaGTTAAATGAGAGGTGTCAGGGTCTGGAAACTGGG +
Preference number: 6 (lower is better)
Translates to: TWSGVVAPLHVF*LNERCQGLETG
Trigger: CCCAGTTTCCAGACCCTGACACCTCTCATTTAACCAGAAGACGTGGAGGGGAGCCACCACCCCTGACCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460129.5
ENST00000646379.1
CDS CAA 72 bp TTGCAGCACTTCTTGAGCACGATCTCAGAAGCCCCCTaGCTGTACATGCGGAAGCTCTCGTCGGGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: LQHFLSTISEAP*LYMRKLSSGSL
Trigger: CAAGCTGCCCGACGAGAGCTTCCGCATGTACAGCAAGGGGGCTTCTGAGATCGTGCTCAAGAAGTGCTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000397077.6
ENST00000452124.2
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644553.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS CAA 72 bp GCAGCAGGAGGAAGGCTGGTCGGAGAGGAAAGAGCATaGGACAACGACACGCGACTAGGGCTAGAGAGATTG +
Preference number: 6 (lower is better)
Translates to: AAGGRLVGEERA*DNDTRLGLERL
Trigger: CAATCTCTCTAGCCCTAGTCGCGTGTCGTTGTCCAATGCTCTTTCCTCTCCGACCAGCCTTCCTCCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000352432.9
ENST00000460129.5
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
CDS CAA 90 bp TTTGGTTTTTGGAGTAAAAGTCGCTGTTGGTCATGTCACCCATGTTaGCTGCGGTCCTTGCTCGGGCTGGGCCCAAGGGTCAGCGCTGGA +
Preference number: 6 (lower is better)
Translates to: FGFWSKSRCWSCHPC*LRSLLGLGPRVSAG
Trigger: TCCAGCGCTGACCCTTGGGCCCAGCCCGAGCAAGGACCGCAGCAAACATGGGTGACATGACCAACAGCGACTTTTACTCCAAAAACCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000360273.7
ENST00000397077.6
ENST00000460129.5
ENST00000480680.2
ENST00000638646.2
ENST00000643662.1
ENST00000644807.1
ENST00000645850.1
ENST00000646379.1
CDS TCA 72 bp TCCTGGACTGGCCCCAAACGAGCTCTCCTAACCCAATaGATATGCACCACATCCACTGGTCCAGCTGCAGTG +
Preference number: 6 (lower is better)
Translates to: SWTGPKRALLTQ*ICTTSTGPAAV
Trigger: CACTGCAGCTGGACCAGTGGATGTGGTGCATATTCATTGGGTTAGGAGAGCTCGTTTGGGGCCAGTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467702.3
CDS CCA 72 bp ATTGGACAAGACAGAGACTGGGACAAGACCTGGAGATaGAACAGACAGAGCCTACCTGGCCCATGCAGGCCT +
Preference number: 6 (lower is better)
Translates to: IGQDRDWDKTWR*NRQSLPGPCRP
Trigger: AGGCCTGCATGGGCCAGGTAGGCTCTGTCTGTTCCATCTCCAGGTCTTGTCCCAGTCTCTGTCTTGTCCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480680.2
CDS CCA 72 bp CTAGGAGTCGTCAGAACCAGGAATCTGCAGGGGAAGTaGGAGCAGGAGGTGCCTTATCTGTCTAGCAAGGTA +
Preference number: 6 (lower is better)
Translates to: LGVVRTRNLQGK*EQEVPYLSSKV
Trigger: TACCTTGCTAGACAGATAAGGCACCTCCTGCTCCCACTTCCCCTGCAGATTCCTGGTTCTGACGACTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468426.1
CDS TCA 72 bp ACGACGCGGATCTCTTTTAATTTCACTCTCTCTTGCTaGACTCTGTGTCCAGGGTTCTCTAGCCCTGCCCGG +
Preference number: 6 (lower is better)
Translates to: TTRISFNFTLSC*TLCPGFSSPAR
Trigger: CCGGGCAGGGCTAGAGAACCCTGGACACAGAGTTCAGCAAGAGAGAGTGAAATTAAAAGAGATCCGCGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000352432.9
ENST00000643662.1
ENST00000644807.1
CDS GCA 72 bp TTGTCTTCATTTCTCCCCCTAACAGTGCAAACTCCTTaGCCTAGGAGTCGTCAGAACCAGGAATCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: LSSFLPLTVQTP*PRSRQNQESAG
Trigger: CCCTGCAGATTCCTGGTTCTGACGACTCCTAGGGCAAGGAGTTTGCACTGTTAGGGGGAGAAATGAAGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468426.1
CDS GCA 72 bp GCCTTAAGGATGCAGGAGGTGGCTGTCAGCACAGGGTaGGGACGTAGAAGGCACTCAATAACTATTTTGTTG +
Preference number: 6 (lower is better)
Translates to: ALRMQEVAVSTG*GRRRHSITILL
Trigger: CAACAAAATAGTTATTGAGTGCCTTCTACGTCCGCACCCTGTGCTGACAGCCACCTCCTGCATCCTTAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480680.2
CDS CAA 72 bp TCCTGTTGTTTGGCTTTGCTCTGGCTGGCGTCCACATaGCCATCCTGCATTTTACCATTGACTAGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: SCCLALLWLAST*PSCILPLTRLA
Trigger: TGCCAGCCTAGTCAATGGTAAAATGCAGGATGGCAATGTGGACGCCAGCCAGAGCAAAGCCAAACAACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000352432.9
ENST00000360273.7
ENST00000644553.1
ENST00000645850.1
CDS TCA 72 bp AGACTCACAACCTCTTTTAATTTCACTCTCTCTTGCTaGACTCTGTGTCCAGGGTTCTCTAGCCCTGCCCGG +
Preference number: 6 (lower is better)
Translates to: RLTTSFNFTLSC*TLCPGFSSPAR
Trigger: CCGGGCAGGGCTAGAGAACCCTGGACACAGAGTTCAGCAAGAGAGAGTGAAATTAAAAGAGGTTGTGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460129.5
CDS TCA 72 bp ATTTCTACTCAATACTGGAGTGATGATGGGACCAATTaGTGCTGGCTGTTTCCACCACTTGAGGCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: ISTQYWSDDGTN*CWLFPPLEAGD
Trigger: GTCTCCAGCCTCAAGTGGTGGAAACAGCCAGCATCAATTGGTCCCATCATCACTCCAGTATTGAGTAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480680.2