RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATP2A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000196296

Ensembl transcript IDs: ENST00000357084.7, ENST00000395503.9, ENST00000536376.5, ENST00000562185.5, ENST00000563975.1, ENST00000564112.1, ENST00000564470.1, ENST00000564732.1, ENST00000565042.5

Found 452 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCCTTGATCACCGCCATGATCTTTTCCTTCACCGGCCCCGTCAGTaGCACCCGGGTGGTGCCAACTCGCACATAGTTACAGCGGTCGAT +
Preference number: 1 (lower is better)
Translates to: LLDHRHDLFLHRPRQ*HPGGANSHIVTAVD
Trigger: ATCGACCGCTGTAACTATGTGCGAGTTGGCACCACCCGGGTGCCACTGACGGGGCCGGTGAAGGAAAAGATCATGGCGGTGATCAAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR-3UTR CCA 90 bp CACCGGCCCCGTCAGTGGCACCCGGGTGGTGCCAACTCGCACATAGTTACAGCGCCGAGTTGCAGGCGTTaGCTCTCTCCACCTTCGAGA +
Preference number: 2 (lower is better)
Translates to: HRPRQWHPGGANSHIVTAPSCRR*LSPPSR
Trigger: TCTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGG...CGCTGTAACTATGTGCGAGTTGGCACCACCCGGGTGCCACTGACGGGGCCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR-3UTR GCA 90 bp GATCACCGCCATGATCTTTTCCTTCACCGGCCCCGTCAGTGGCACCCGGGTGGTGGCGGATCACCGAGTTaGAGGCGTTGGCTCTCTCCA +
Preference number: 2 (lower is better)
Translates to: DHRHDLFLHRPRQWHPGGGGSPS*RRWLSP
Trigger: TGGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCC...ACCACCCGGGTGCCACTGACGGGGCCGGTGAAGGAAAAGATCATGGCGGTGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR-3UTR CCA 90 bp GGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAACACATGACACGGGTGTaGGGGACAGGACGGGGGTCT +
Preference number: 2 (lower is better)
Translates to: GWEGEFTRLRGRRVAEGEHMTRV*GTGRGS
Trigger: AGACCCCCGTCCTGTCCCCCACACCCGTGTCATGTG...TTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
3UTR-3UTR CCA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGACACATGACACGGGTGTaGGGGACAGGACGGGGGTCT +
Preference number: 2 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGHMTRV*GTGRGS
Trigger: AGACCCCCGTCCTGTCCCCCACACCCGTGTCATGTG...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
3UTR-3UTR CCA 90 bp CCGGCCAGTGCCCCACTCCTTGATCACCGCCATGATCTTTTCCTTCACCGGCCCTCAGTGGCACCCGGGTaGTGCCAACTCGCACATAGT +
Preference number: 2 (lower is better)
Translates to: PASAPLLDHRHDLFLHRPSVAPG*CQLAHS
Trigger: ACTATGTGCGAGTTGGCACCACCCGGGTGCCACTGA...GGGCCGGTGAAGGAAAAGATCATGGCGGTGATCAAGGAGTGGGGCACTGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR-3UTR TCA 90 bp CCGGCCAGTGCCCCACTCCTTGATCACCGCCATGATCTTTTCCTTCACCGGCCCCCTCAGGGGCACCCTTaGCAAACATCTTGTTGCCCA +
Preference number: 2 (lower is better)
Translates to: PASAPLLDHRHDLFLHRPPQGHP*QTSCCP
Trigger: TGGGCAACAAGATGTTTGTCAAGGGTGCCCCTGAGG...GGGCCGGTGAAGGAAAAGATCATGGCGGTGATCAAGGAGTGGGGCACTGGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR-3UTR TCA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGCCACAGCTCTGCCTaGAGATGTGTCACTATCGGG +
Preference number: 2 (lower is better)
Translates to: DRTGVCATALPEDVSLSGCHSSA*RCVTIG
Trigger: CCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCA...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
3UTR-3UTR CCA 90 bp CCGGGTGGTGCCAACTCGCACATAGTTACAGCGGTCGATGACGCCCTCAGGGGCAGCAATAGACAGACATaGACTTTCTGTCTCGGGAGA +
Preference number: 2 (lower is better)
Translates to: PGGANSHIVTAVDDALRGSNRQT*TFCLGR
Trigger: TCTCCCGAGACAGAAAGTCCATGTCTGTCTATTGCT...GCCCCTGAGGGCGTCATCGACCGCTGTAACTATGTGCGAGTTGGCACCACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR-3UTR TCA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGTGCCACAGCTCTGCCTaGAGATGTGTCACTATCGGG +
Preference number: 2 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGCHSSA*RCVTIG
Trigger: CCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCA...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
3UTR-3UTR TCA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCTGCCACAGCTCTGCCTaGAGATGTGTCACTATCGGG +
Preference number: 2 (lower is better)
Translates to: FSINKQLSAVGRLVPASPCHSSA*RCVTIG
Trigger: CCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCA...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
3UTR-3UTR GCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGTCTGTGCCACAGCTCTaGCTGAAGATGTGTCACTAT +
Preference number: 2 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKSVPQL*LKMCHY
Trigger: ATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGA...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
3UTR-3UTR CCA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAACCTTCTTTCATCTTCTaGATCTGTGACACGGGCTCA +
Preference number: 2 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKPSFIF*ICDTGS
Trigger: TGAGCCCGTGTCACAGATCCAGAAGATGAAAGAAGG...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395503.9
ENST00000536376.5
3UTR-3UTR TCA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGGGAATTTACAAGGTTaGGAGGGAGGCGGGTGGCCG +
Preference number: 2 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPGNLQG*EGGGWP
Trigger: CGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCC...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
3UTR-3UTR CCA 90 bp ATGTCAGGTCCGTCTCATACTCCAGGAACCTGGCAGAGTCATCCAGGACCATTTCAGCCCGGGAAGATTTaGCTGGGGAGCAATAGACAG +
Preference number: 2 (lower is better)
Translates to: MSGPSHTPGTWQSHPGPFQPGKI*LGSNRQ
Trigger: CTGTCTATTGCTCCCCAGCCAAATCTTCCCGGGCTG...AAATGGTCCTGGATGACTCTGCCAGGTTCCTGGAGTATGAGACGGACCTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR-3UTR GCA 90 bp GAAAGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACATCTGTGCCACAGCTCTaGCTGAAGATGTGTCACTAT +
Preference number: 2 (lower is better)
Translates to: EREGDMFINRHMTRVWGTSVPQL*LKMCHY
Trigger: ATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGA...TGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
3UTR-3UTR TCA 90 bp AGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCATCTTCTGGATCTGTaGCACGGGCTCAGAGATGGA +
Preference number: 2 (lower is better)
Translates to: RLFRRLFSINKQLSAVGRHLLDL*HGLRDG
Trigger: TCCATCTCTGAGCCCGTGTCACAGATCCAGAAGATG...GCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395503.9
3UTR-3UTR CCA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTCCTTCTTTCATCTTCTaGATCTGTGACACGGGCTCA +
Preference number: 2 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPPSFIF*ICDTGS
Trigger: TGAGCCCGTGTCACAGATCCAGAAGATGAAAGAAGG...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395503.9
ENST00000536376.5
3UTR-3UTR CCA 90 bp GGAGAACTCATTCAGGAGGCAGATGTCCCCATCCACCTTGTCAATGATAAACATAAACGCAACAGAGACTaGGCTTTTCATTCCCGAGAA +
Preference number: 2 (lower is better)
Translates to: GELIQEADVPIHLVNDKHKRNRD*AFHSRE
Trigger: TTCTCGGGAATGAAAAGCCCAGTCTCTGTTGCGTTT...ATGTTTATCATTGACAAGGTGGATGGGGACATCTGCCTCCTGAATGAGTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564470.1
3UTR-3UTR CAA 90 bp CCGGGTGGTGCCAACTCGCACATAGTTACAGCGGTCGATGACGCCCTCAGGGGCACCGAGTTGCAGGCGTaGGCTCTCTCCACCTTCGAG +
Preference number: 3 (lower is better)
Translates to: PGGANSHIVTAVDDALRGTELQA*ALSTFE
Trigger: CTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGGT...GCCCCTGAGGGCGTCATCGACCGCTGTAACTATGTGCGAGTTGGCACCACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR CCA 72 bp CACCGCCATGATCTTTTCCTTCACCGGCCCCGTCAGTaGCACCCGGGTGGTGCCAACTCGCACATAGTTACA +
Preference number: 3 (lower is better)
Translates to: HRHDLFLHRPRQ*HPGGANSHIVT
Trigger: TGTAACTATGTGCGAGTTGGCACCACCCGGGTGCCACTGACGGGGCCGGTGAAGGAAAAGATCATGGCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR-3UTR CAA 90 bp CCACGAATGTCAGGTCCGTCTCATACTCCAGGAACCTGGCAGAGTCATCCAGGATGGCGGATCACCGAGTaGCAGGCGTTGGCTCTCTCC +
Preference number: 3 (lower is better)
Translates to: PRMSGPSHTPGTWQSHPGWRITE*QALALS
Trigger: GGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCCA...TCCTGGATGACTCTGCCAGGTTCCTGGAGTATGAGACGGACCTGACATTCGTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR-3UTR CAA 90 bp TCCTTGATCACCGCCATGATCTTTTCCTTCACCGGCCCCGTCAGTGGCACCCGGTTGACAAACATCTTGTaGCCCACAGCAGCCCGGGAA +
Preference number: 3 (lower is better)
Translates to: SLITAMIFSFTGPVSGTRLTNIL*PTAARE
Trigger: TTCCCGGGCTGCTGTGGGCAACAAGATGTTTGTCAA...CCGGGTGCCACTGACGGGGCCGGTGAAGGAAAAGATCATGGCGGTGATCAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR TCA 72 bp CTCGCCCAGGAGCCAAGGTTACAGCCTTTCTCACCCTaGTCTGACCACACAGCCCTTGCTTCTCAGAACAGC +
Preference number: 3 (lower is better)
Translates to: LAQEPRLQPFSP*SDHTALASQNS
Trigger: GCTGTTCTGAGAAGCAAGGGCTGTGTGGTCAGATCAGGGTGAGAAAGGCTGTAACCTTGGCTCCTGGGCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564470.1
3UTR CCA 72 bp TCTTCATTAGCTGGCGGATCACCGAGTTGCAGGCGTTaGCTCTCTCCACCTTCGAGAGGCTTCTCACATCCG +
Preference number: 3 (lower is better)
Translates to: SSLAGGSPSCRR*LSPPSRGFSHP
Trigger: CGGATGTGAGAAGCCTCTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCCAGCTAATGAAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR CCA 72 bp CATCTTGTTGCCCACAGCAGCCCGGGAAGATTTGGCTaGGGAGCAATAGACAGACATGGACTTTCTGTCTCG +
Preference number: 3 (lower is better)
Translates to: HLVAHSSPGRFG*GAIDRHGLSVS
Trigger: CGAGACAGAAAGTCCATGTCTGTCTATTGCTCCCCAGCCAAATCTTCCCGGGCTGCTGTGGGCAACAAGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR TCA 72 bp CCAGGAGCCAAGGTTACAGCCTTTCTCACCCTGATCTaGCCACACAGCCCTTGCTTCTCAGAACAGCAATTT +
Preference number: 3 (lower is better)
Translates to: PGAKVTAFLTLI*PHSPCFSEQQF
Trigger: AAATTGCTGTTCTGAGAAGCAAGGGCTGTGTGGTCAGATCAGGGTGAGAAAGGCTGTAACCTTGGCTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564470.1
3UTR CCA 72 bp CAAACATCTTGTTGCCCACAGCAGCCCGGGAAGATTTaGCTGGGGAGCAATAGACAGACATGGACTTTCTGT +
Preference number: 3 (lower is better)
Translates to: QTSCCPQQPGKI*LGSNRQTWTFC
Trigger: ACAGAAAGTCCATGTCTGTCTATTGCTCCCCAGCCAAATCTTCCCGGGCTGCTGTGGGCAACAAGATGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
3UTR-3UTR CAA 90 bp GGAGAACTCATTCAGGAGGCAGATGTCCCCATCCACCTTGTCAATGATAAACATCTGACCACACAGCCCTaGCTTCTCAGAACAGCAATT +
Preference number: 3 (lower is better)
Translates to: GELIQEADVPIHLVNDKHLTTQP*LLRTAI
Trigger: AATTGCTGTTCTGAGAAGCAAGGGCTGTGTGGTCAG...ATGTTTATCATTGACAAGGTGGATGGGGACATCTGCCTCCTGAATGAGTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564470.1
CDS-3UTR CCA 90 bp GGTGTGGGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACACCGGCCCCGTCAGTaGCACCCGGGTGGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: GVGDRTGVCATALPEDVSHRPRQ*HPGGAN
Trigger: GTTGGCACCACCCGGGTGCCACTGACGGGGCCGGTG...TGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCCCACACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGCCCAGCTGGTCCTTATaGGGGAGCAGGGGGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SGLGRGIYKVEREAGGRGPSWSL*GSRGRP
Trigger: CGGCCTCCCCCTGCTCCCTCATAAGGACCAGCTGGG...CCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357084.7
CDS-3UTR CCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGCACCGGCCCCGTCAGTaGCACCCGGGTGGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRHRPRQ*HPGGAN
Trigger: GTTGGCACCACCCGGGTGCCACTGACGGGGCCGGTG...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GCCCCGTCAGTGGCACCCGGGTGGTGCCAACTCGCACATAGTTACAGCGGTCGATCTCCACCAGGGTGGTaGGTGCTGTCTCGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: APSVAPGWCQLAHSYSGRSPPGW*VLSRWP
Trigger: AGGCCACCGAGACAGCACTCACCACCCTGGTGGAGA...TCGACCGCTGTAACTATGTGCGAGTTGGCACCACCCGGGTGCCACTGACGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR TCA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGAGCTGGATGGAGCCCGTaGCCTCCTTGCGCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGAGWSP*PPCAEG
Trigger: ACCCTCCGCGCAAGGAGGTCACGGGCTCCATCCAGC...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTCACCGGCCCCGTCAGTaGCACCCGGGTGGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGHRPRQ*HPGGAN
Trigger: GTTGGCACCACCCGGGTGCCACTGACGGGGCCGGTG...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGCACGGACAGGGCCATaGTCATGGGCTCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRARTGP*SWARGP
Trigger: AGGCCCCCGAGCCCATGACCATGGCCCTGTCCGTGC...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAGCACGGACAGGGCCATaGTCATGGGCTCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: WEGEFTRLRGRRVAEGEGARTGP*SWARGP
Trigger: AGGCCCCCGAGCCCATGACCATGGCCCTGTCCGTGC...TCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGGGGCGCCGGGCTCCTTaGAGTCATCATCACACCGCC +
Preference number: 4 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGGRRAP*SHHHTA
Trigger: GGCGGTGTGATGATGACTCCAAGGAGCCCGGCGCCC...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000536376.5
CDS-3UTR TCA 90 bp TCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGCCCTCCACAAAGCTCTaGCCCCCGTCCCACTTGAGC +
Preference number: 4 (lower is better)
Translates to: SGLGRGIYKVEREAGGRGPSTKL*PPSHLS
Trigger: GCTCAAGTGGGACGGGGGTCAGAGCTTTGTGGAGGG...CCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR TCA 90 bp CCCTCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAAGTTACAGCGGTCGATaGCGCCCTCAGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: PSGLGRGIYKVEREAGGRSYSGR*RPQGHP
Trigger: AGGGTGCCCCTGAGGGCGTCATCGACCGCTGTAACT...TCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GCTGGCGGATCACCGAGTTGCAGGCGTTGGCTCTCTCCACCTTCGAGAGGCTTCAGTTACAGCGGTCGATaGCGCCCTCAGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: AGGSPSCRRWLSPPSRGFSYSGR*RPQGHP
Trigger: AGGGTGCCCCTGAGGGCGTCATCGACCGCTGTAACT...GAAGCCTCTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR TCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGCTGGATGGAGCCCGTaGCCTCCTTGCGCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKAGWSP*PPCAEG
Trigger: ACCCTCCGCGCAAGGAGGTCACGGGCTCCATCCAGC...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGTGTGGGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCAGGGCAGGGGCGTCATTaGCGCCATCACCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: GVGDRTGVCATALPEDVSGQGRH*RHHLSW
Trigger: CCATGACAGGTGATGGCGTCAATGACGCCCCTGCCC...TGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCCCACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGCCAGGGCCCGGAGCTTaGAGATCATCGGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRPGPGA*RSSAGG
Trigger: ACCCCCTGCCGATGATCTTCAAGCTCCGGGCCCTGG...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGACAGTGGTGGCCACGATaGCCAAGGCCTTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGQWWPR*PRPCRL
Trigger: CAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTG...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGCGGTCGCCTTGTCCCTaGAAGCCCCTCGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKRSPCP*KPLGVG
Trigger: CCCAACCCCGAGGGGCTTGCAGGGACAAGGCGACCG...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGCGGTGCCCACACCAGTaGTGGCCACGATGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRRCPHQ*WPRCPR
Trigger: CCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCG...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGGAGGACAGGCCCAGGGCTGTGGCTaGGAGCCCGTCGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: VCATALPEDVSLSGWGGQAQGCG*EPVGHQ
Trigger: TTGGTGACCGACGGGCTCCCAGCCACAGCCCTGGGC...CTGTCCTCCCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGCCCAGGGCTGTGGCTaGGAGCCCGTCGGTCACCAA +
Preference number: 4 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKAQGCG*EPVGHQ
Trigger: TTGGTGACCGACGGGCTCCCAGCCACAGCCCTGGGC...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGCACATGACACGGGTGTaGGGGACAGGACGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGHMTRV*GTGRGS
Trigger: AGACCCCCGTCCTGTCCCCCACACCCGTGTCATGTG...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGGCAAGAAGGGGGTGATACCTGTGACACGGGCTCAGAGATGGAGGAGGGGGAACAGGGGCACAGCAGCTaGGCTGAGGGCAAGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GQEGGDTCDTGSEMEEGEQGHSS*AEGKKG
Trigger: CCCCTTCTTGCCCTCAGCCCAGCTGCTGTGCCCCTG...TTCCCCCTCCTCCATCTCTGAGCCCGTGTCACAGGTATCACCCCCTTCTTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564112.1
CDS-3UTR TCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGTCTCCACCAGGGTGGTaGGTGCTGTCTCGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRSPPGW*VLSRWP
Trigger: AGGCCACCGAGACAGCACTCACCACCCTGGTGGAGA...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGGCAAGAAGGGGGTGATACCTGTGACACGGGCTCAGAGATGGAGGAGGGGGAAGCACAGCAGCTGGGCTaGGGGCAAGAAGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GQEGGDTCDTGSEMEEGEAQQLG*GQEGGD
Trigger: ATCACCCCCTTCTTGCCCTCAGCCCAGCTGCTGTGC...TTCCCCCTCCTCCATCTCTGAGCCCGTGTCACAGGTATCACCCCCTTCTTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000564112.1
CDS-3UTR GCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGCAGTGGTGGCCACGATaGCCAAGGCCTTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKQWWPR*PRPCRL
Trigger: CAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTG...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGGGCGGATCACCGAGTTaGAGGCGTTGGCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGGGSPS*RRWLSP
Trigger: TGGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCC...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGGGGTTCCCACTCGTaGGGGGTCTTCCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: GWEGEFTRLRGRRVAEGEGGSHS*GVFLSV
Trigger: CACACTGAGGAAGACCCCCCACGAGTGGGAACCCCC...TTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR CCA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGAACCAGGAGCCCCCATaGACGGGGTCGTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGNQEPP*TGSLKW
Trigger: CCACTTCAACGACCCCGTCCATGGGGGCTCCTGGTT...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGTGGTGCCAACTCGCACATAGTTACAGCGGTCGATGACGCCCTCAGGGGCACCGAAGACCTTCGGGGATaGCAGCCACAGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GGANSHIVTAVDDALRGTEDLRG*QPQPRP
Trigger: TGGCCTTGGCTGTGGCTGCCATCCCCGAAGGTCTTC...GGTGCCCCTGAGGGCGTCATCGACCGCTGTAACTATGTGCGAGTTGGCACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CCA 90 bp CACCGGCCCCGTCAGTGGCACCCGGGTGGTGCCAACTCGCACATAGTTACAGCGCAGCCCGGGAAGATTTaGCTGGGGAGCAATAGACAG +
Preference number: 4 (lower is better)
Translates to: HRPRQWHPGGANSHIVTAQPGKI*LGSNRQ
Trigger: CTGTCTATTGCTCCCCAGCCAAATCTTCCCGGGCTG...CGCTGTAACTATGTGCGAGTTGGCACCACCCGGGTGCCACTGACGGGGCCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CCA 90 bp CTTGACAAACATCTTGTTGCCCACAGCAGCCCGGGAAGATTTGGCTGGGGAGCACACCGGCCCCGTCAGTaGCACCCGGGTGGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: LDKHLVAHSSPGRFGWGAHRPRQ*HPGGAN
Trigger: GTTGGCACCACCCGGGTGCCACTGACGGGGCCGGTG...TGCTCCCCAGCCAAATCTTCCCGGGCTGCTGTGGGCAACAAGATGTTTGTCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGCGTCACGGCACAGCTaGATGGAGCCCGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKASRHS*MEPVTS
Trigger: GGAGGTCACGGGCTCCATCCAGCTGTGCCGTGACGC...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGACAGGGCCATGGTCATaGGCTCGGGGGCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRTGPWS*ARGPRR
Trigger: TCTTCGAGGCCCCCGAGCCCATGACCATGGCCCTGT...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GCTGGCGGATCACCGAGTTGCAGGCGTTGGCTCTCTCCACCTTCGAGAGGCTTCTGGCACCTCTCCCTCTaGAGCGTAAGTGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: AGGSPSCRRWLSPPSRGFWHLSL*SVSGAG
Trigger: ACCGGCTCCACTTACGCTCCAGAGGGAGAGGTGCCA...GAAGCCTCTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR TCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGTCTCCACCAGGGTGGTaGGTGCTGTCTCGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKSPPGW*VLSRWP
Trigger: AGGCCACCGAGACAGCACTCACCACCCTGGTGGAGA...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGGGGAATTTACAAGGTTaGGAGGGAGGCGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: DRTGVCATALPEDVSLSGGNLQG*EGGGWP
Trigger: CGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCC...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAGGGAATTTACAAGGTTaGGAGGGAGGCGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: WEGEFTRLRGRRVAEGEGGNLQG*EGGGWP
Trigger: CGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCC...TCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGTCTGCGTTCCGCTCCTaGCAAACCCCCACGATGGCA +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRSAFRS*QTPTMA
Trigger: TGCCATCGTGGGGGTTTGGCAGGAGCGGAACGCAGA...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGCTCGATGGCGTTCTCTaGGTTCCGCTCCTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGLDGVL*VPLLPN
Trigger: GTTTGGCAGGAGCGGAACGCAGAGAACGCCATCGAG...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGCAAGGCCTTGCCGGCTaGAATGTTGGTGCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: SGLGRGIYKVEREAGGRGQGLAG*NVGARE
Trigger: TTCTCGGGCACCAACATTGCAGCCGGCAAGGCCTTG...CCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGCGATGCCCAAGGCCTTaGCGGCTGCAATGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRRCPRP*RLQCWC
Trigger: GCACCAACATTGCAGCCGGCAAGGCCTTGGGCATCG...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGTCTTCCCAATCTCGGTaGCCACACCAGTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SGLGRGIYKVEREAGGRGSSQSR*PHQWWP
Trigger: TGGCCACCACTGGTGTGGGCACCGAGATTGGGAAGA...CCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGTGTGGGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCATCTTCCCAATCTCGGTaGCCACACCAGTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GVGDRTGVCATALPEDVSSSQSR*PHQWWP
Trigger: TGGCCACCACTGGTGTGGGCACCGAGATTGGGAAGA...TGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGACCAGCCCGTCATACTaGCCTGGCCGGACTGGCTTA +
Preference number: 4 (lower is better)
Translates to: GDRTGVCATALPEDVSLSTSPSY*PGRTGL
Trigger: TAAGCCAGTCCGGCCAGGGCAGTATGACGGGCTGGT...CGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAGGCGGATCACCGAGTTaGAGGCGTTGGCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: WEGEFTRLRGRRVAEGEGGGSPS*RRWLSP
Trigger: TGGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCC...TCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGTGTGGGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCAGTGGCACCCGGGTGGTaGCAACTCGCACATAGTTAC +
Preference number: 4 (lower is better)
Translates to: GVGDRTGVCATALPEDVSVAPGW*QLAHSY
Trigger: GTAACTATGTGCGAGTTGGCACCACCCGGGTGCCAC...TGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp ATCACCGCCATGATCTTTTCCTTCACCGGCCCCGTCAGTGGCACCCGGGTGGTGGTGGCACCCGGGTGGTaGCAACTCGCACATAGTTAC +
Preference number: 4 (lower is better)
Translates to: ITAMIFSFTGPVSGTRVVVAPGW*QLAHSY
Trigger: GTAACTATGTGCGAGTTGGCACCACCCGGGTGCCAC...CACCACCCGGGTGCCACTGACGGGGCCGGTGAAGGAAAAGATCATGGCGGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR GCA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGAGCGGAGGGTCCAGCATaGCCACTACACCCACGAATG +
Preference number: 4 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGAEGPA*PLHPRM
Trigger: CATTCGTGGGTGTAGTGGGCATGCTGGACCCTCCGC...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGCGGAGGGTCCAGCATaGCCACTACACCCACGAATG +
Preference number: 4 (lower is better)
Translates to: GDRTGVCATALPEDVSLSAEGPA*PLHPRM
Trigger: CATTCGTGGGTGTAGTGGGCATGCTGGACCCTCCGC...CGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGCGGAGGGTCCAGCATaGCCACTACACCCACGAATG +
Preference number: 4 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRAEGPA*PLHPRM
Trigger: CATTCGTGGGTGTAGTGGGCATGCTGGACCCTCCGC...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGTGTGGGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCAACAATCTTGGACTTGTaGGAGGGCTCCACACGGGCG +
Preference number: 4 (lower is better)
Translates to: GVGDRTGVCATALPEDVSTILDL*EGSTRA
Trigger: CGCCCGTGTGGAGCCCTCGCACAAGTCCAAGATTGT...TGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGAAGACCTTCGGGGATaGCAGCCACAGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYREDLRG*QPQPRP
Trigger: TGGCCTTGGCTGTGGCTGCCATCCCCGAAGGTCTTC...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGTCAGTGGCACCCGGGTaGTGCCAACTCGCACATAGT +
Preference number: 4 (lower is better)
Translates to: SGLGRGIYKVEREAGGRGSVAPG*CQLAHS
Trigger: ACTATGTGCGAGTTGGCACCACCCGGGTGCCACTGA...CCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCGCACGGACAGGGCCATaGTCATGGGCTCGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVARTGP*SWARGP
Trigger: AGGCCCCCGAGCCCATGACCATGGCCCTGTCCGTGC...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp CCCTCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGATCCGTGGTTTTAGCATaGGCGGCCTCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PSGLGRGIYKVEREAGGRSVVLA*AASIVL
Trigger: GAGCACAATGGAGGCCGCTCATGCTAAAACCACGGA...TCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR TCA 90 bp CCCTCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGACTTGATCCTTTGCACTaGCTTGCGGTCAGCCCGGTA +
Preference number: 4 (lower is better)
Translates to: PSGLGRGIYKVEREAGGRLDPLH*LAVSPV
Trigger: TACCGGGCTGACCGCAAGTCAGTGCAAAGGATCAAG...TCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGTGTGGGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACGATGTCCCGAGCCTTaGTCCTTTGCACTGACTTGC +
Preference number: 4 (lower is better)
Translates to: GVGDRTGVCATALPEDVSRCPEP*SFALTC
Trigger: GCAAGTCAGTGCAAAGGATCAAGGCTCGGGACATCG...TGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCCCACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGCCTCGGTGCACTGCATaGAGTGAGTCAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRPRCTA*SESAGC
Trigger: ACAGCCAGCTGACTCACTTCATGCAGTGCACCGAGG...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGCCAGGGCCCGGAGCTTaGAGATCATCGGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGPGPGA*RSSAGG
Trigger: ACCCCCTGCCGATGATCTTCAAGCTCCGGGCCCTGG...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCCCAGGGCCCGGAGCTTaGAGATCATCGGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVPGPGA*RSSAGG
Trigger: ACCCCCTGCCGATGATCTTCAAGCTCCGGGCCCTGG...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGTGCCACAGCTCTGCCTaGAGATGTGTCACTATCGGG +
Preference number: 4 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGCHSSA*RCVTIG
Trigger: CCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCA...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGTGCCACAGCTCTGCCTaGAGATGTGTCACTATCGGG +
Preference number: 4 (lower is better)
Translates to: SGLGRGIYKVEREAGGRGCHSSA*RCVTIG
Trigger: CCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCA...CCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGTCTGCGTTCCGCTCCTaGCAAACCCCCACGATGGCA +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKSAFRS*QTPTMA
Trigger: TGCCATCGTGGGGGTTTGGCAGGAGCGGAACGCAGA...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGAGGATTCGGATGTCTaGAGGGACTTTGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: SGLGRGIYKVEREAGGRGEDSDV*RDFVPH
Trigger: GTGGGGGACAAAGTCCCTGCAGACATCCGAATCCTC...CCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGCAAGGCCTTGCCGGCTaGAATGTTGGTGCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: GDRTGVCATALPEDVSLSQGLAG*NVGARE
Trigger: TTCTCGGGCACCAACATTGCAGCCGGCAAGGCCTTG...CGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGCGATGCCCAAGGCCTTaGCGGCTGCAATGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKRCPRP*RLQCWC
Trigger: GCACCAACATTGCAGCCGGCAAGGCCTTGGGCATCG...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGTCTTCCCAATCTCGGTaGCCACACCAGTGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GDRTGVCATALPEDVSLSSSQSR*PHQWWP
Trigger: TGGCCACCACTGGTGTGGGCACCGAGATTGGGAAGA...CGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGACCAGCCCGTCATACTaGCCTGGCCGGACTGGCTTA +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKTSPSY*PGRTGL
Trigger: TAAGCCAGTCCGGCCAGGGCAGTATGACGGGCTGGT...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGGAGGACAGACCAGCCCGTCATACTaGCCTGGCCGGACTGGCTTA +
Preference number: 4 (lower is better)
Translates to: VCATALPEDVSLSGWGGQTSPSY*PGRTGL
Trigger: TAAGCCAGTCCGGCCAGGGCAGTATGACGGGCTGGT...CTGTCCTCCCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGACAATCTTGGACTTGTaGGAGGGCTCCACACGGGCG +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRTILDL*EGSTRA
Trigger: CGCCCGTGTGGAGCCCTCGCACAAGTCCAAGATTGT...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGAGATTCCGCTTAACTTaGTCCGGGGTGAGGCCCGTG +
Preference number: 4 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRRFRLT*SGVRPV
Trigger: CACGGGCCTCACCCCGGACCAAGTTAAGCGGAATCT...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR CCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGACTCGCCTGTCAGGATaGACTGGTCAACCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKTRLSG*TGQPAA
Trigger: CGCTGCGGGTTGACCAGTCCATCCTGACAGGCGAGT...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGCGGTGCCCACACCAGTaGTGGCCACGATGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGRCPHQ*WPRCPR
Trigger: CCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCG...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTAACCAGGAGCCCCCATaGACGGGGTCGTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGNQEPP*TGSLKW
Trigger: CCACTTCAACGACCCCGTCCATGGGGGCTCCTGGTT...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGAAGACCTTCGGGGATaGCAGCCACAGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKEDLRG*QPQPRP
Trigger: TGGCCTTGGCTGTGGCTGCCATCCCCGAAGGTCTTC...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGACAAGACCTCTCCCTCTaGAGCGTAAGTGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: WEGEFTRLRGRRVAEGEGQDLSL*SVSGAG
Trigger: ACCGGCTCCACTTACGCTCCAGAGGGAGAGGTCTTG...TCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGCCGAGTTGCAGGCGTTaGCTCTCTCCACCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: DRTGVCATALPEDVSLSGPSCRR*LSPPSR
Trigger: TCTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGG...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GCCCTCAGGGGCACCCTTGACAAACATCTTGTTGCCCACAGCAGCCCGGGAAGACCGAGTTGCAGGCGTTaGCTCTCTCCACCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: ALRGTLDKHLVAHSSPGRPSCRR*LSPPSR
Trigger: TCTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGG...TCTTCCCGGGCTGCTGTGGGCAACAAGATGTTTGTCAAGGGTGCCCCTGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CCA 90 bp CACCGGCCCCGTCAGTGGCACCCGGGTGGTGCCAACTCGCACATAGTTACAGCGTCCTTCTTCATTAGCTaGCGGATCACCGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HRPRQWHPGGANSHIVTASFFIS*RITELQ
Trigger: CTGCAACTCGGTGATCCGCCAGCTAATGAAGAAGGA...CGCTGTAACTATGTGCGAGTTGGCACCACCCGGGTGCCACTGACGGGGCCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CCA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCGCGTCACGGCACAGCTaGATGGAGCCCGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVASRHS*MEPVTS
Trigger: GGAGGTCACGGGCTCCATCCAGCTGTGCCGTGACGC...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp CCCTCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGACATTGCACATCTCGATaGTCACCAGCACGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PSGLGRGIYKVEREAGGRHCTSR*SPARTG
Trigger: CCCTGTCCGTGCTGGTGACCATCGAGATGTGCAATG...TCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
3UTR CAA 72 bp ATGACGCCCTCAGGGGCACCCTTGACAAACATCTTGTaGCCCACAGCAGCCCGGGAAGATTTGGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: MTPSGAPLTNIL*PTAAREDLAGE
Trigger: CTCCCCAGCCAAATCTTCCCGGGCTGCTGTGGGCAACAAGATGTTTGTCAAGGGTGCCCCTGAGGGCGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR TCA 90 bp GCTGGCGGATCACCGAGTTGCAGGCGTTGGCTCTCTCCACCTTCGAGAGGCTTCCGTAAGTGGAGCCGGTaGTGGAGAACTCATTCAGGA +
Preference number: 4 (lower is better)
Translates to: AGGSPSCRRWLSPPSRGFRKWSR*WRTHSG
Trigger: TCCTGAATGAGTTCTCCATCACCGGCTCCACTTACG...GAAGCCTCTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCCAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR TCA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCTCTCCACCAGGGTGGTaGGTGCTGTCTCGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVSPPGW*VLSRWP
Trigger: AGGCCACCGAGACAGCACTCACCACCCTGGTGGAGA...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGCCTCAGGGGCACCCTTaGCAAACATCTTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRPQGHP*QTSCCP
Trigger: TGGGCAACAAGATGTTTGTCAAGGGTGCCCCTGAGG...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAACCTCAGGGGCACCCTTaGCAAACATCTTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GWEGEFTRLRGRRVAEGEPQGHP*QTSCCP
Trigger: TGGGCAACAAGATGTTTGTCAAGGGTGCCCCTGAGG...TTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp ACGCCCTCAGGGGCACCCTTGACAAACATCTTGTTGCCCACAGCAGCCCGGGAACCTCAGGGGCACCCTTaGCAAACATCTTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: TPSGAPLTNILLPTAAREPQGHP*QTSCCP
Trigger: TGGGCAACAAGATGTTTGTCAAGGGTGCCCCTGAGG...TTCCCGGGCTGCTGTGGGCAACAAGATGTTTGTCAAGGGTGCCCCTGAGGGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR TCA 90 bp GGTGTGGGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACACCTGTCATGGCTGTaGTCTCATCGTAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: GVGDRTGVCATALPEDVSHLSWL*SHRRTA
Trigger: TGCAGTCCTACGATGAGATCACAGCCATGACAGGTG...TGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGGAGGACAGCCTCGGTGCACTGCATaGAGTGAGTCAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: VCATALPEDVSLSGWGGQPRCTA*SESAGC
Trigger: ACAGCCAGCTGACTCACTTCATGCAGTGCACCGAGG...CTGTCCTCCCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGTCCGAGCAACGAACTTaGGGATTTCGTCGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGSEQRT*GFRRAQ
Trigger: TTGGGCTCGACGAAATCCTCAAGTTCGTTGCTCGGA...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGCTCGATGGCGTTCTCTaGGTTCCGCTCCTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKLDGVL*VPLLPN
Trigger: GTTTGGCAGGAGCGGAACGCAGAGAACGCCATCGAG...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGTCCTTTGCACTGACTTaGGGTCAGCCCGGTAGACCT +
Preference number: 4 (lower is better)
Translates to: GDRTGVCATALPEDVSLSSFALT*GQPGRP
Trigger: AGGTCTACCGGGCTGACCGCAAGTCAGTGCAAAGGA...CGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGGAGGATTCGGATGTCTaGAGGGACTTTGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGREDSDV*RDFVPH
Trigger: GTGGGGGACAAAGTCCCTGCAGACATCCGAATCCTC...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGGAGGATTCGGATGTCTaGAGGGACTTTGTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: DRTGVCATALPEDVSLSGEDSDV*RDFVPH
Trigger: GTGGGGGACAAAGTCCCTGCAGACATCCGAATCCTC...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCCAGTGGTGGCCACGATaGCCAAGGCCTTGCCGGCTG +
Preference number: 4 (lower is better)
Translates to: FSINKQLSAVGRLVPASPQWWPR*PRPCRL
Trigger: CAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTG...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp CCCTCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAATGACCTTGGAGAGCTaGTCCCCAAACTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: PSGLGRGIYKVEREAGGRMTLES*SPNSSS
Trigger: GCTGGATGAGTTTGGGGAGCAGCTCTCCAAGGTCAT...TCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGATGACCTTGGAGAGCTaGTCCCCAAACTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: SGLGRGIYKVEREAGGRGMTLES*SPNSSS
Trigger: GCTGGATGAGTTTGGGGAGCAGCTCTCCAAGGTCAT...CCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGCCAAGGAGGAGTCATTaGAGAGGGCACAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRPRRSH*RGHRWW
Trigger: CCACCATCTGTGCCCTCTGCAATGACTCCTCCTTGG...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGCGTTCTCCCCAAAGATaGCAATTCGCCGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRRSPQR*QFAGRW
Trigger: CCATCTGCCGGCGAATTGGCATCTTTGGGGAGAACG...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGCACATAGCCCCCGATTaGCATGTAGCGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SGLGRGIYKVEREAGGRGHIAPD*HVAEEE
Trigger: CTCTTCTTCCGCTACATGGCAATCGGGGGCTATGTG...CCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGTCGCCTTGTCCCTaGAAGCCCCTCGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: REGDMFINRHMTRVWGTGRSPCP*KPLGVG
Trigger: CCCAACCCCGAGGGGCTTGCAGGGACAAGGCGACCG...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp CCCTCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGATGCCGGCTGCAATGTTaGTGCCCGAGAAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: PSGLGRGIYKVEREAGGRCRLQC*CPRKAC
Trigger: ACATGCTTTTCTCGGGCACCAACATTGCAGCCGGCA...TCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGTGCCCACACCAGTGGTaGCCACGATGCCCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGCPHQW*PRCPRP
Trigger: AGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCA...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGCAAGACCTCTCCCTCTaGAGCGTAAGTGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKQDLSL*SVSGAG
Trigger: ACCGGCTCCACTTACGCTCCAGAGGGAGAGGTCTTG...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTCCGAGTTGCAGGCGTTaGCTCTCTCCACCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGPSCRR*LSPPSR
Trigger: TCTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGG...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGCAGCCCGGGAAGATTTaGCTGGGGAGCAATAGACAG +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRQPGKI*LGSNRQ
Trigger: CTGTCTATTGCTCCCCAGCCAAATCTTCCCGGGCTG...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GCTGGCGGATCACCGAGTTGCAGGCGTTGGCTCTCTCCACCTTCGAGAGGCTTCCATACTCCAGGAACCTaGCAGAGTCATCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: AGGSPSCRRWLSPPSRGFHTPGT*QSHPGP
Trigger: TGGTCCTGGATGACTCTGCCAGGTTCCTGGAGTATG...GAAGCCTCTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCCAGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CCA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCACAGGGCCATGGTCATaGGCTCGGGGGCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVTGPWS*ARGPRR
Trigger: TCTTCGAGGCCCCCGAGCCCATGACCATGGCCCTGT...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCAGGACCATGAGCCACTaGGTGAGGTCCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: FSINKQLSAVGRLVPASPRTMSH*VRSRAR
Trigger: CCGGGCCCTGGACCTCACCCAGTGGCTCATGGTCCT...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGGAGGACAGGCAGCGTGGTGGATTTaGTGGCGAGGATTCGGATGT +
Preference number: 4 (lower is better)
Translates to: VCATALPEDVSLSGWGGQAAWWI*WRGFGC
Trigger: ACATCCGAATCCTCGCCATCAAATCCACCACGCTGC...CTGTCCTCCCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGCGTAAGTGGAGCCGGTaGTGGAGAACTCATTCAGGA +
Preference number: 4 (lower is better)
Translates to: DRTGVCATALPEDVSLSGRKWSR*WRTHSG
Trigger: TCCTGAATGAGTTCTCCATCACCGGCTCCACTTACG...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGCACCTTTGGCCTCGTTaGAGTCCAAGGAGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRHLWPR*SPRRSH
Trigger: ATGACTCCTCCTTGGACTTCAACGAGGCCAAAGGTG...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGCACCTTTGGCCTCGTTaGAGTCCAAGGAGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: DRTGVCATALPEDVSLSGHLWPR*SPRRSH
Trigger: ATGACTCCTCCTTGGACTTCAACGAGGCCAAAGGTG...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGACACCTTTGGCCTCGTTaGAGTCCAAGGAGGAGTCAT +
Preference number: 4 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGHLWPR*SPRRSH
Trigger: ATGACTCCTCCTTGGACTTCAACGAGGCCAAAGGTG...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGCACCTGTCATGGCTGTaGTCTCATCGTAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRHLSWL*SHRRTA
Trigger: TGCAGTCCTACGATGAGATCACAGCCATGACAGGTG...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGCCCAATGACTGGCAGTaGGATCTTGAGGACCATGAG +
Preference number: 4 (lower is better)
Translates to: DRTGVCATALPEDVSLSGPNDWQ*DLEDHE
Trigger: CTCATGGTCCTCAAGATCTCACTGCCAGTCATTGGG...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGGCAAGAAGGGGGTGATACCTGTGACACGGGCTCAGAGATGGAGGAGGGGGAATCCGAGCAACGAACTTaGGGATTTCGTCGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GQEGGDTCDTGSEMEEGESEQRT*GFRRAQ
Trigger: TTGGGCTCGACGAAATCCTCAAGTTCGTTGCTCGGA...TTCCCCCTCCTCCATCTCTGAGCCCGTGTCACAGGTATCACCCCCTTCTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564112.1
CDS-3UTR TCA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGGGAATTTACAAGGTTaGGAGGGAGGCGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGGNLQG*EGGGWP
Trigger: CGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCC...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGCATCTTCTGGATCTGTaGCACGGGCTCAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRHLLDL*HGLRDG
Trigger: TCCATCTCTGAGCCCGTGTCACAGATCCAGAAGATG...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAACACGAAGGAAATGCATaGGGCCAGGAGGAGAATCCG +
Preference number: 4 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKHEGNA*GQEENP
Trigger: CGGATTCTCCTCCTGGCCGCATGCATTTCCTTCGTG...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR GCA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAACGAGCCTTGATCCTTTaGACTGACTTGCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKRALIL*TDLRSA
Trigger: GGCTGACCGCAAGTCAGTGCAAAGGATCAAGGCTCG...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGTGTGGGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACGGCTGCAATGTTGGTaGCCGAGAAAAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: GVGDRTGVCATALPEDVSRLQCW*PRKACS
Trigger: AGAACATGCTTTTCTCGGGCACCAACATTGCAGCCG...TGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCCCACACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGTCATCCAGCTTCTGCTaGAAGGGGGTCTTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRSSSFC*KGVLSC
Trigger: ACAGGACAAGACCCCCTTGCAGCAGAAGCTGGATGA...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGAACTCATCCAGCTTCTaGTGCAAGGGGGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GDRTGVCATALPEDVSLSNSSSF*CKGVLS
Trigger: GGACAAGACCCCCTTGCAGCAGAAGCTGGATGAGTT...CGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGATGACCTTGGAGAGCTaGTCCCCAAACTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRMTLES*SPNSSS
Trigger: GCTGGATGAGTTTGGGGAGCAGCTCTCCAAGGTCAT...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGAATGGCATTCTTCTTTaGCATCCGACGGGTACCCAG +
Preference number: 4 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGNGILL*HPTGTQ
Trigger: CTGGGTACCCGTCGGATGGCAAAGAAGAATGCCATT...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGCCAAGGAGGAGTCATTaGAGAGGGCACAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKPRRSH*RGHRWW
Trigger: CCACCATCTGTGCCCTCTGCAATGACTCCTCCTTGG...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGGCGGATCACCGAGTTaGAGGCGTTGGCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGGGSPS*RRWLSP
Trigger: TGGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCC...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAACGTTCTCCCCAAAGATaGCAATTCGCCGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKRSPQR*QFAGRW
Trigger: CCATCTGCCGGCGAATTGGCATCTTTGGGGAGAACG...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGCACATAGCCCCCGATTaGCATGTAGCGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRHIAPD*HVAEEE
Trigger: CTCTTCTTCCGCTACATGGCAATCGGGGGCTATGTG...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp CCCTCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGCTGTTCAGTGCATTaGACATCTCGATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: PSGLGRGIYKVEREAGGRGCSVH*TSRWSP
Trigger: TGGTGACCATCGAGATGTGCAATGCACTGAACAGCC...TCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGGGACAGGCTGTTCAGTaGATTGCACATCTCGATGGT +
Preference number: 4 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGGQAVQ*IAHLDG
Trigger: ACCATCGAGATGTGCAATGCACTGAACAGCCTGTCC...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCACTCGCCTGTCAGGATaGACTGGTCAACCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVTRLSG*TGQPAA
Trigger: CGCTGCGGGTTGACCAGTCCATCCTGACAGGCGAGT...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGTGCCGGCTGCAATGTTaGTGCCCGAGAAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: GDRTGVCATALPEDVSLSCRLQC*CPRKAC
Trigger: ACATGCTTTTCTCGGGCACCAACATTGCAGCCGGCA...CGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGATGCCGGCTGCAATGTTaGTGCCCGAGAAAAGCATGT +
Preference number: 4 (lower is better)
Translates to: WEGEFTRLRGRRVAEGEGCRLQC*CPRKAC
Trigger: ACATGCTTTTCTCGGGCACCAACATTGCAGCCGGCA...TCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp CCCTCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGATCTGTGGCAGCCATTTaGTCTCGGATCTTCCCAATC +
Preference number: 4 (lower is better)
Translates to: PSGLGRGIYKVEREAGGRSVAAI*SRIFPI
Trigger: GATTGGGAAGATCCGAGACCAAATGGCTGCCACAGA...TCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGCTGCCCTGGCCGGACTaGCTTATCATTCTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRLPWPD*LIILQD
Trigger: GTCTTGAAGAATGATAAGCCAGTCCGGCCAGGGCAG...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGGAGGACAGCCCGTCATACTGCCCTaGCCGGACTGGCTTATCATT +
Preference number: 4 (lower is better)
Translates to: VCATALPEDVSLSGWGGQPVILP*PDWLII
Trigger: AATGATAAGCCAGTCCGGCCAGGGCAGTATGACGGG...CTGTCCTCCCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGCCGGGAAGATTTGGCTaGGGAGCAATAGACAGACAT +
Preference number: 4 (lower is better)
Translates to: SGLGRGIYKVEREAGGRGPGRFG*GAIDRH
Trigger: ATGTCTGTCTATTGCTCCCCAGCCAAATCTTCCCGG...CCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp ATCACCGCCATGATCTTTTCCTTCACCGGCCCCGTCAGTGGCACCCGGGTGGTGCCGGGAAGATTTGGCTaGGGAGCAATAGACAGACAT +
Preference number: 4 (lower is better)
Translates to: ITAMIFSFTGPVSGTRVVPGRFG*GAIDRH
Trigger: ATGTCTGTCTATTGCTCCCCAGCCAAATCTTCCCGG...CACCACCCGGGTGCCACTGACGGGGCCGGTGAAGGAAAAGATCATGGCGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CCA 90 bp GGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAACATACTCCAGGAACCTaGCAGAGTCATCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: GWEGEFTRLRGRRVAEGEHTPGT*QSHPGP
Trigger: TGGTCCTGGATGACTCTGCCAGGTTCCTGGAGTATG...TTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGAGCGTCACGGCACAGCTaGATGGAGCCCGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: REGDMFINRHMTRVWGTGASRHS*MEPVTS
Trigger: GGAGGTCACGGGCTCCATCCAGCTGTGCCGTGACGC...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTCAATTCGCCGGCAGATaGCAATGGCTGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGQFAGR*QWLCPC
Trigger: ACAAGGGCACAGCCATTGCCATCTGCCGGCGAATTG...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAACAATTCGCCGGCAGATaGCAATGGCTGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKQFAGR*QWLCPC
Trigger: ACAAGGGCACAGCCATTGCCATCTGCCGGCGAATTG...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTACTCCACAATCTTaGACTTGTGCGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRGTPQS*TCARAP
Trigger: TGGAGCCCTCGCACAAGTCCAAGATTGTGGAGTACC...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGATCTATGCCCTCAAAGTaGGTGTTGTCCTCGGTGCAC +
Preference number: 4 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGSMPSK*VLSSVH
Trigger: GTGCACCGAGGACAACACCCACTTTGAGGGCATAGA...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTCATTGCACATCTCGATaGTCACCAGCACGGACAGGG +
Preference number: 4 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGHCTSR*SPARTG
Trigger: CCCTGTCCGTGCTGGTGACCATCGAGATGTGCAATG...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGCATTGCACATCTCGATaGTCACCAGCACGGACAGGG +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKHCTSR*SPARTG
Trigger: CCCTGTCCGTGCTGGTGACCATCGAGATGTGCAATG...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGAAGGACCATGAGCCACTaGGTGAGGTCCAGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: REGDMFINRHMTRVWGTGRTMSH*VRSRAR
Trigger: CCGGGCCCTGGACCTCACCCAGTGGCTCATGGTCCT...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TCGCCCAGGAGCCAAGGTTACAGCCTTTCTCACCCTGATCTGACCACACAGCCCAAGGGCAGGGGTTCTTaGCCTGAGGTCAGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SPRSQGYSLSHPDLTTQPKGRGS*PEVSGR
Trigger: TCTTCCACTGACCTCAGGCCAAGAACCCCTGCCCTT...GGGCTGTGTGGTCAGATCAGGGTGAGAAAGGCTGTAACCTTGGCTCCTGGGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564470.1
CDS-3UTR TCA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGAAGTTACAGCGGTCGATaGCGCCCTCAGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: REGDMFINRHMTRVWGTGSYSGR*RPQGHP
Trigger: AGGGTGCCCCTGAGGGCGTCATCGACCGCTGTAACT...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCTGGATGGAGCCCGTaGCCTCCTTGCGCGGAGGGT +
Preference number: 4 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPAGWSP*PPCAEG
Trigger: ACCCTCCGCGCAAGGAGGTCACGGGCTCCATCCAGC...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGCCCAATGACTGGCAGTaGGATCTTGAGGACCATGAG +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKPNDWQ*DLEDHE
Trigger: CTCATGGTCCTCAAGATCTCACTGCCAGTCATTGGG...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGGAGGACAGTCCGAGCAACGAACTTaGGGATTTCGTCGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: VCATALPEDVSLSGWGGQSEQRT*GFRRAQ
Trigger: TTGGGCTCGACGAAATCCTCAAGTTCGTTGCTCGGA...CTGTCCTCCCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTCATCTTCTGGATCTGTaGCACGGGCTCAGAGATGGA +
Preference number: 4 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGHLLDL*HGLRDG
Trigger: TCCATCTCTGAGCCCGTGTCACAGATCCAGAAGATG...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGCGGCTGCAATGTTGGTaGCCGAGAAAAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: GDRTGVCATALPEDVSLSRLQCW*PRKACS
Trigger: AGAACATGCTTTTCTCGGGCACCAACATTGCAGCCG...CGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCCGATGCCCAAGGCCTTaGCGGCTGCAATGTTGGTGC +
Preference number: 4 (lower is better)
Translates to: FSINKQLSAVGRLVPASPRCPRP*RLQCWC
Trigger: GCACCAACATTGCAGCCGGCAAGGCCTTGGGCATCG...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAAACTCATCCAGCTTCTaGTGCAAGGGGGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKNSSSF*CKGVLS
Trigger: GGACAAGACCCCCTTGCAGCAGAAGCTGGATGAGTT...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGAACTCATCCAGCTTCTaGTGCAAGGGGGTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKNSSSF*CKGVLS
Trigger: GGACAAGACCCCCTTGCAGCAGAAGCTGGATGAGTT...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTGGCACCCGGGTGGTaGCAACTCGCACATAGTTAC +
Preference number: 4 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGVAPGW*QLAHSY
Trigger: GTAACTATGTGCGAGTTGGCACCACCCGGGTGCCAC...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGAGGCTGTTCAGTGCATTaGACATCTCGATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGGCSVH*TSRWSP
Trigger: TGGTGACCATCGAGATGTGCAATGCACTGAACAGCC...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGACAGGCTGTTCAGTaGATTGCACATCTCGATGGT +
Preference number: 4 (lower is better)
Translates to: GWEGEFTRLRGRRVAEGEGQAVQ*IAHLDG
Trigger: ACCATCGAGATGTGCAATGCACTGAACAGCCTGTCC...TTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGGGACAGGCTGTTCAGTaGATTGCACATCTCGATGGT +
Preference number: 4 (lower is better)
Translates to: DRTGVCATALPEDVSLSGGQAVQ*IAHLDG
Trigger: ACCATCGAGATGTGCAATGCACTGAACAGCCTGTCC...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGTCTGTGCCACAGCTCTaGCTGAAGATGTGTCACTAT +
Preference number: 4 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGSVPQL*LKMCHY
Trigger: ATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGA...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCACGGTCGCCTTGTCCCTaGAAGCCCCTCGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: RLFSINKQLSAVGRLVPARSPCP*KPLGVG
Trigger: CCCAACCCCGAGGGGCTTGCAGGGACAAGGCGACCG...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGATGCCCACACCAGTGGTaGCCACGATGCCCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: REGDMFINRHMTRVWGTGCPHQW*PRCPRP
Trigger: AGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCA...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGATCTGTGGCAGCCATTTaGTCTCGGATCTTCCCAATC +
Preference number: 4 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGSVAAI*SRIFPI
Trigger: GATTGGGAAGATCCGAGACCAAATGGCTGCCACAGA...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGACGGGGTCGTTGAAGTaGCCAATGTTGATAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRTGSLK*PMLISQ
Trigger: CTGGCTTATCAACATTGGCCACTTCAACGACCCCGT...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGCAAGACCTCTCCCTCTaGAGCGTAAGTGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGQDLSL*SVSGAG
Trigger: ACCGGCTCCACTTACGCTCCAGAGGGAGAGGTCTTG...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTCTGCCCTGGCCGGACTaGCTTATCATTCTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGLPWPD*LIILQD
Trigger: GTCTTGAAGAATGATAAGCCAGTCCGGCCAGGGCAG...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGTCCTTCTTCATTAGCTaGCGGATCACCGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRSFFIS*RITELQ
Trigger: CTGCAACTCGGTGATCCGCCAGCTAATGAAGAAGGA...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGCCGGGAAGATTTGGCTaGGGAGCAATAGACAGACAT +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRPGRFG*GAIDRH
Trigger: ATGTCTGTCTATTGCTCCCCAGCCAAATCTTCCCGG...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGCCGGGAAGATTTGGCTaGGGAGCAATAGACAGACAT +
Preference number: 4 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRPGRFG*GAIDRH
Trigger: ATGTCTGTCTATTGCTCCCCAGCCAAATCTTCCCGG...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp CCCGGGAAGATTTGGCTGGGGAGCAATAGACAGACATGGACTTTCTGTCTCGGGTCAGTGGCACCCGGGTaGTGCCAACTCGCACATAGT +
Preference number: 4 (lower is better)
Translates to: PGKIWLGSNRQTWTFCLGSVAPG*CQLAHS
Trigger: ACTATGTGCGAGTTGGCACCACCCGGGTGCCACTGA...CCCGAGACAGAAAGTCCATGTCTGTCTATTGCTCCCCAGCCAAATCTTCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CCA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGTACTCCACAATCTTaGACTTGTGCGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGGTPQS*TCARAP
Trigger: TGGAGCCCTCGCACAAGTCCAAGATTGTGGAGTACC...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGTCTATGCCCTCAAAGTaGGTGTTGTCCTCGGTGCAC +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKSMPSK*VLSSVH
Trigger: GTGCACCGAGGACAACACCCACTTTGAGGGCATAGA...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCCCTCGGTGCACTGCATaGAGTGAGTCAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: FSINKQLSAVGRLVPASPPRCTA*SESAGC
Trigger: ACAGCCAGCTGACTCACTTCATGCAGTGCACCGAGG...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCCACGAAGGAAATGCATaGGGCCAGGAGGAGAATCCG +
Preference number: 4 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVHEGNA*GQEENP
Trigger: CGGATTCTCCTCCTGGCCGCATGCATTTCCTTCGTG...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR GCA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCTCCTTTGCACTGACTTaGGGTCAGCCCGGTAGACCT +
Preference number: 4 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVSFALT*GQPGRP
Trigger: AGGTCTACCGGGCTGACCGCAAGTCAGTGCAAAGGA...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTCGGCTGCAATGTTGGTaGCCGAGAAAAGCATGTTCT +
Preference number: 4 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGRLQCW*PRKACS
Trigger: AGAACATGCTTTTCTCGGGCACCAACATTGCAGCCG...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp ATGTCAGGTCCGTCTCATACTCCAGGAACCTGGCAGAGTCATCCAGGACCATTTGGCGGATCACCGAGTTaGAGGCGTTGGCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: MSGPSHTPGTWQSHPGPFGGSPS*RRWLSP
Trigger: TGGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCC...AAATGGTCCTGGATGACTCTGCCAGGTTCCTGGAGTATGAGACGGACCTGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR GCA 90 bp GAAAGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACATGCTCCCACGGTGGCTaGACCCACATAGCCCCCGAT +
Preference number: 4 (lower is better)
Translates to: EREGDMFINRHMTRVWGTCSHGG*THIAPD
Trigger: ATCGGGGGCTATGTGGGTGCAGCCACCGTGGGAGCA...TGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGAGACCTCACAGTCTATaGCCTCAAAGTGGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: DRTGVCATALPEDVSLSGRPHSL*PQSGCC
Trigger: ACAACACCCACTTTGAGGGCATAGACTGTGAGGTCT...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGAAGACCTCACAGTCTATaGCCTCAAAGTGGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGRPHSL*PQSGCC
Trigger: ACAACACCCACTTTGAGGGCATAGACTGTGAGGTCT...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGCTGTTCAGTGCATTaGACATCTCGATGGTCACCA +
Preference number: 4 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGGCSVH*TSRWSP
Trigger: TGGTGACCATCGAGATGTGCAATGCACTGAACAGCC...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGTCTGTGCCACAGCTCTaGCTGAAGATGTGTCACTAT +
Preference number: 4 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRSVPQL*LKMCHY
Trigger: ATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGA...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCGGTGCCCACACCAGTaGTGGCCACGATGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LFSINKQLSAVGRLVPASRCPHQ*WPRCPR
Trigger: CCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCG...GCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGTCTGTGGCAGCCATTTaGTCTCGGATCTTCCCAATC +
Preference number: 4 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKSVAAI*SRIFPI
Trigger: GATTGGGAAGATCCGAGACCAAATGGCTGCCACAGA...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTTCTTGTCCTGTTCTGTaGCAGCCATTTGGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGSCPVL*QPFGLG
Trigger: TCCGAGACCAAATGGCTGCCACAGAACAGGACAAGA...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGGAGGACAGACGGGGTCGTTGAAGTaGCCAATGTTGATAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VCATALPEDVSLSGWGGQTGSLK*PMLISQ
Trigger: CTGGCTTATCAACATTGGCCACTTCAACGACCCCGT...CTGTCCTCCCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCCCCGTCATACTGCCCTaGCCGGACTGGCTTATCATT +
Preference number: 4 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVPVILP*PDWLII
Trigger: AATGATAAGCCAGTCCGGCCAGGGCAGTATGACGGG...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GATCACCGCCATGATCTTTTCCTTCACCGGCCCCGTCAGTGGCACCCGGGTGGTAGCAATAGACAGACATaGACTTTCTGTCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: DHRHDLFLHRPRQWHPGGSNRQT*TFCLGR
Trigger: TCTCCCGAGACAGAAAGTCCATGTCTGTCTATTGCT...ACCACCCGGGTGCCACTGACGGGGCCGGTGAAGGAAAAGATCATGGCGGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CCA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCCAGCCCGGGAAGATTTaGCTGGGGAGCAATAGACAG +
Preference number: 4 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVQPGKI*LGSNRQ
Trigger: CTGTCTATTGCTCCCCAGCCAAATCTTCCCGGGCTG...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGACCTTCTTTCATCTTCTaGATCTGTGACACGGGCTCA +
Preference number: 4 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGPSFIF*ICDTGS
Trigger: TGAGCCCGTGTCACAGATCCAGAAGATGAAAGAAGG...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGCCTTCTTTCATCTTCTaGATCTGTGACACGGGCTCA +
Preference number: 4 (lower is better)
Translates to: DRTGVCATALPEDVSLSGPSFIF*ICDTGS
Trigger: TGAGCCCGTGTCACAGATCCAGAAGATGAAAGAAGG...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGTTCTCACATCCGTGTTaGACACATTCATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: SGLGRGIYKVEREAGGRGFSHPC*THSSSP
Trigger: TGGAGAAGATGAATGTGTTCAACACGGATGTGAGAA...CCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCCCTCAGGGGCACCCTTaGCAAACATCTTGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: FSINKQLSAVGRLVPASPPQGHP*QTSCCP
Trigger: TGGGCAACAAGATGTTTGTCAAGGGTGCCCCTGAGG...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCCACCTGTCATGGCTGTaGTCTCATCGTAGGACTGCA +
Preference number: 4 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVHLSWL*SHRRTA
Trigger: TGCAGTCCTACGATGAGATCACAGCCATGACAGGTG...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCGGGCAGGGGCGTCATTaGCGCCATCACCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: LFSINKQLSAVGRLVPASGQGRH*RHHLSW
Trigger: CCATGACAGGTGATGGCGTCAATGACGCCCCTGCCC...GCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAGGGCAGGGGCGTCATTaGCGCCATCACCTGTCATGG +
Preference number: 4 (lower is better)
Translates to: RLFSINKQLSAVGRLVPAGQGRH*RHHLSW
Trigger: CCATGACAGGTGATGGCGTCAATGACGCCCCTGCCC...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCTCAGCTGGCTGTAGTTaGCATGAGGCCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: FSINKQLSAVGRLVPASPSAGCS*HEAHPQ
Trigger: CTGAGGATGGGCCTCATGTCAACTACAGCCAGCTGA...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCCCCAATGACTGGCAGTaGGATCTTGAGGACCATGAG +
Preference number: 4 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVPNDWQ*DLEDHE
Trigger: CTCATGGTCCTCAAGATCTCACTGCCAGTCATTGGG...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGAGTCCAACTGCCTGTCTaGCTGGGTTTCTTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGVQLPV*LGFFFL
Trigger: TAAAAAGAAGAAACCCAGGCAGACAGGCAGTTGGAC...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR GCA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGAGTGGCACCCGGGTGGTaGCAACTCGCACATAGTTAC +
Preference number: 4 (lower is better)
Translates to: REGDMFINRHMTRVWGTGVAPGW*QLAHSY
Trigger: GTAACTATGTGCGAGTTGGCACCACCCGGGTGCCAC...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTTGCTCCCACGGTGGCTaGACCCACATAGCCCCCGAT +
Preference number: 4 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPCSHGG*THIAPD
Trigger: ATCGGGGGCTATGTGGGTGCAGCCACCGTGGGAGCA...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGGGGGTTCCCACTCGTaGGGGGTCTTCCTCAGTGTG +
Preference number: 4 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPGGSHS*GVFLSV
Trigger: CACACTGAGGAAGACCCCCCACGAGTGGGAACCCCC...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR CCA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCATTGTGCTCCCTTCCTaGGGGCCGGGGCCGGTGTGT +
Preference number: 4 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVIVLPS*GPGPVC
Trigger: ACACACCGGCCCCGGCCCCCAGGAAGGGAGCACAAT...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR CCA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGAGCAATAGACAGACATaGACTTTCTGTCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: DRTGVCATALPEDVSLSGSNRQT*TFCLGR
Trigger: TCTCCCGAGACAGAAAGTCCATGTCTGTCTATTGCT...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAGCAATAGACAGACATaGACTTTCTGTCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRSNRQT*TFCLGR
Trigger: TCTCCCGAGACAGAAAGTCCATGTCTGTCTATTGCT...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCCAGCCCGGGAAGATTTaGCTGGGGAGCAATAGACAG +
Preference number: 4 (lower is better)
Translates to: FSINKQLSAVGRLVPASPQPGKI*LGSNRQ
Trigger: CTGTCTATTGCTCCCCAGCCAAATCTTCCCGGGCTG...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGGTACTCCACAATCTTaGACTTGTGCGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGGTPQS*TCARAP
Trigger: TGGAGCCCTCGCACAAGTCCAAGATTGTGGAGTACC...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAACAGGGCCATGGTCATaGGCTCGGGGGCCTCGAAGA +
Preference number: 4 (lower is better)
Translates to: RLFSINKQLSAVGRLVPATGPWS*ARGPRR
Trigger: TCTTCGAGGCCCCCGAGCCCATGACCATGGCCCTGT...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGGAGGACAGAGCAAAAGGATGCTCACTTCCTTCTTTCATCTTCTGGATCTGTGCACATGACACGGGTGTaGGGGACAGGACGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: GRTEQKDAHFLLSSSGSVHMTRV*GTGRGS
Trigger: AGACCCCCGTCCTGTCCCCCACACCCGTGTCATGTG...CACAGATCCAGAAGATGAAAGAAGGAAGTGAGCATCCTTTTGCTCTGTCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACTTGATCCTTTGCACTaGCTTGCGGTCAGCCCGGTA +
Preference number: 4 (lower is better)
Translates to: REGDMFINRHMTRVWGTGLDPLH*LAVSPV
Trigger: TACCGGGCTGACCGCAAGTCAGTGCAAAGGATCAAG...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCCGTAAGTGGAGCCGGTaGTGGAGAACTCATTCAGGA +
Preference number: 4 (lower is better)
Translates to: FSINKQLSAVGRLVPASPRKWSR*WRTHSG
Trigger: TCCTGAATGAGTTCTCCATCACCGGCTCCACTTACG...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAATTCTCACATCCGTGTTaGACACATTCATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GWEGEFTRLRGRRVAEGEFSHPC*THSSSP
Trigger: TGGAGAAGATGAATGTGTTCAACACGGATGTGAGAA...TTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCAGTTACAGCGGTCGATaGCGCCCTCAGGGGCACCCT +
Preference number: 4 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVSYSGR*RPQGHP
Trigger: AGGGTGCCCCTGAGGGCGTCATCGACCGCTGTAACT...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCATCTGCGTTCCGCTCCTaGCAAACCCCCACGATGGCA +
Preference number: 4 (lower is better)
Translates to: RLFSINKQLSAVGRLVPASAFRS*QTPTMA
Trigger: TGCCATCGTGGGGGTTTGGCAGGAGCGGAACGCAGA...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGAGCCTTGATCCTTTaGACTGACTTGCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: REGDMFINRHMTRVWGTGRALIL*TDLRSA
Trigger: GGCTGACCGCAAGTCAGTGCAAAGGATCAAGGCTCG...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCACGGGGTCGTTGAAGTaGCCAATGTTGATAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVTGSLK*PMLISQ
Trigger: CTGGCTTATCAACATTGGCCACTTCAACGACCCCGT...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAACCAGGAGCCCCCATaGACGGGGTCGTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RLFSINKQLSAVGRLVPANQEPP*TGSLKW
Trigger: CCACTTCAACGACCCCGTCCATGGGGGCTCCTGGTT...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGAAGACCTTCGGGGATaGCAGCCACAGCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPEDLRG*QPQPRP
Trigger: TGGCCTTGGCTGTGGCTGCCATCCCCGAAGGTCTTC...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACCCGTCATACTGCCCTaGCCGGACTGGCTTATCATT +
Preference number: 4 (lower is better)
Translates to: REGDMFINRHMTRVWGTGPVILP*PDWLII
Trigger: AATGATAAGCCAGTCCGGCCAGGGCAGTATGACGGG...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GAAAGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACACCGAGTTGCAGGCGTTaGCTCTCTCCACCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: EREGDMFINRHMTRVWGTPSCRR*LSPPSR
Trigger: TCTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGG...TGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGTCCTTCTTCATTAGCTaGCGGATCACCGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGSFFIS*RITELQ
Trigger: CTGCAACTCGGTGATCCGCCAGCTAATGAAGAAGGA...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTAGCAATAGACAGACATaGACTTTCTGTCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGSNRQT*TFCLGR
Trigger: TCTCCCGAGACAGAAAGTCCATGTCTGTCTATTGCT...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GAAAGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACATCAGTGGCACCCGGGTaGTGCCAACTCGCACATAGT +
Preference number: 4 (lower is better)
Translates to: EREGDMFINRHMTRVWGTSVAPG*CQLAHS
Trigger: ACTATGTGCGAGTTGGCACCACCCGGGTGCCACTGA...TGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCCATACTCCAGGAACCTaGCAGAGTCATCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: FSINKQLSAVGRLVPASPHTPGT*QSHPGP
Trigger: TGGTCCTGGATGACTCTGCCAGGTTCCTGGAGTATG...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCACATGACACGGGTGTaGGGGACAGGACGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVHMTRV*GTGRGS
Trigger: AGACCCCCGTCCTGTCCCCCACACCCGTGTCATGTG...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GAAAGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACACGATGTCCCGAGCCTTaGTCCTTTGCACTGACTTGC +
Preference number: 4 (lower is better)
Translates to: EREGDMFINRHMTRVWGTRCPEP*SFALTC
Trigger: GCAAGTCAGTGCAAAGGATCAAGGCTCGGGACATCG...TGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GAAAGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACACCAGCACGAAGGAAATaGATGCGGCCAGGAGGAGAA +
Preference number: 4 (lower is better)
Translates to: EREGDMFINRHMTRVWGTPARRK*MRPGGE
Trigger: TTCTCCTCCTGGCCGCATGCATTTCCTTCGTGCTGG...TGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR GCA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTCTCGATGGCGTTCTCTaGGTTCCGCTCCTGCCAAAC +
Preference number: 4 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPLDGVL*VPLLPN
Trigger: GTTTGGCAGGAGCGGAACGCAGAGAACGCCATCGAG...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp GGGAGGACAGAGCAAAAGGATGCTCACTTCCTTCTTTCATCTTCTGGATCTGTGCAAGGCCTTGCCGGCTaGAATGTTGGTGCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: GRTEQKDAHFLLSSSGSVQGLAG*NVGARE
Trigger: TTCTCGGGCACCAACATTGCAGCCGGCAAGGCCTTG...CACAGATCCAGAAGATGAAAGAAGGAAGTGAGCATCCTTTTGCTCTGTCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAACAATCTTGGACTTGTaGGAGGGCTCCACACGGGCG +
Preference number: 4 (lower is better)
Translates to: RLFSINKQLSAVGRLVPATILDL*EGSTRA
Trigger: CGCCCGTGTGGAGCCCTCGCACAAGTCCAAGATTGT...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACACATAGCCCCCGATTaGCATGTAGCGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: REGDMFINRHMTRVWGTGHIAPD*HVAEEE
Trigger: CTCTTCTTCCGCTACATGGCAATCGGGGGCTATGTG...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCTTGATCCTTTGCACTaGCTTGCGGTCAGCCCGGTA +
Preference number: 4 (lower is better)
Translates to: LFSINKQLSAVGRLVPASLDPLH*LAVSPV
Trigger: TACCGGGCTGACCGCAAGTCAGTGCAAAGGATCAAG...GCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGGAGGACAGAGCAAAAGGATGCTCACTTCCTTCTTTCATCTTCTGGATCTGTGCGATGTCCCGAGCCTTaGTCCTTTGCACTGACTTGC +
Preference number: 4 (lower is better)
Translates to: GRTEQKDAHFLLSSSGSVRCPEP*SFALTC
Trigger: GCAAGTCAGTGCAAAGGATCAAGGCTCGGGACATCG...CACAGATCCAGAAGATGAAAGAAGGAAGTGAGCATCCTTTTGCTCTGTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAGCGTGGTGGATTTaGTGGCGAGGATTCGGATGT +
Preference number: 4 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPAAWWI*WRGFGC
Trigger: ACATCCGAATCCTCGCCATCAAATCCACCACGCTGC...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAGCAGCGTGGTGGATTTaGTGGCGAGGATTCGGATGT +
Preference number: 4 (lower is better)
Translates to: RLFSINKQLSAVGRLVPAAAWWI*WRGFGC
Trigger: ACATCCGAATCCTCGCCATCAAATCCACCACGCTGC...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GAAAGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACACGTAAGTGGAGCCGGTaGTGGAGAACTCATTCAGGA +
Preference number: 4 (lower is better)
Translates to: EREGDMFINRHMTRVWGTRKWSR*WRTHSG
Trigger: TCCTGAATGAGTTCTCCATCACCGGCTCCACTTACG...TGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GGGAGGACAGAGCAAAAGGATGCTCACTTCCTTCTTTCATCTTCTGGATCTGTGTCAGCTGGCTGTAGTTaGCATGAGGCCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: GRTEQKDAHFLLSSSGSVSAGCS*HEAHPQ
Trigger: CTGAGGATGGGCCTCATGTCAACTACAGCCAGCTGA...CACAGATCCAGAAGATGAAAGAAGGAAGTGAGCATCCTTTTGCTCTGTCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp GAACTCATTCAGGAGGCAGATGTCCCCATCCACCTTGTCAATGATAAACATCCTCAGGGGTTCTTGGCCTaGGGTCAGTGGAAGACCCTT +
Preference number: 4 (lower is better)
Translates to: ELIQEADVPIHLVNDKHPQGFLA*GQWKTL
Trigger: AAGGGTCTTCCACTGACCTCAGGCCAAGAACCCCTG...AGGATGTTTATCATTGACAAGGTGGATGGGGACATCTGCCTCCTGAATGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564470.1
CDS-3UTR GCA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGAAATGGCATTCTTCTTTaGCATCCGACGGGTACCCAG +
Preference number: 4 (lower is better)
Translates to: REGDMFINRHMTRVWGTGNGILL*HPTGTQ
Trigger: CTGGGTACCCGTCGGATGGCAAAGAAGAATGCCATT...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp ATGTCAGGTCCGTCTCATACTCCAGGAACCTGGCAGAGTCATCCAGGACCATTTAATGGCATTCTTCTTTaGCATCCGACGGGTACCCAG +
Preference number: 4 (lower is better)
Translates to: MSGPSHTPGTWQSHPGPFNGILL*HPTGTQ
Trigger: CTGGGTACCCGTCGGATGGCAAAGAAGAATGCCATT...AAATGGTCCTGGATGACTCTGCCAGGTTCCTGGAGTATGAGACGGACCTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR GCA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCACCAAGGAGGAGTCATTaGAGAGGGCACAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: RLFSINKQLSAVGRLVPAPRRSH*RGHRWW
Trigger: CCACCATCTGTGCCCTCTGCAATGACTCCTCCTTGG...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCACGTTCTCCCCAAAGATaGCAATTCGCCGGCAGATGG +
Preference number: 4 (lower is better)
Translates to: RLFSINKQLSAVGRLVPARSPQR*QFAGRW
Trigger: CCATCTGCCGGCGAATTGGCATCTTTGGGGAGAACG...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp AGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCACTCGCCTGTCAGGATaGACTGGTCAACCCGCAGCG +
Preference number: 4 (lower is better)
Translates to: RLFRRLFSINKQLSAVGRTRLSG*TGQPAA
Trigger: CGCTGCGGGTTGACCAGTCCATCCTGACAGGCGAGT...GCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395503.9
CDS-3UTR CCA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCTCAGTGGCACCCGGGTaGTGCCAACTCGCACATAGT +
Preference number: 4 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVSVAPG*CQLAHS
Trigger: ACTATGTGCGAGTTGGCACCACCCGGGTGCCACTGA...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCACAATTCGCCGGCAGATaGCAATGGCTGTGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: RLFSINKQLSAVGRLVPAQFAGR*QWLCPC
Trigger: ACAAGGGCACAGCCATTGCCATCTGCCGGCGAATTG...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTCAGCAGGGAGCTCATTaGGGCCGTATTTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPQQGAH*GRISPD
Trigger: ATCTGGAGAAATACGGCCTCAATGAGCTCCCTGCTG...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR TCA 90 bp CTTGACAAACATCTTGTTGCCCACAGCAGCCCGGGAAGATTTGGCTGGGGAGCATTCTCACATCCGTGTTaGACACATTCATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LDKHLVAHSSPGRFGWGAFSHPC*THSSSP
Trigger: TGGAGAAGATGAATGTGTTCAACACGGATGTGAGAA...TGCTCCCCAGCCAAATCTTCCCGGGCTGCTGTGGGCAACAAGATGTTTGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR TCA 90 bp TTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCTCCGAGCAACGAACTTaGGGATTTCGTCGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: LFSINKQLSAVGRLVPASSEQRT*GFRRAQ
Trigger: TTGGGCTCGACGAAATCCTCAAGTTCGTTGCTCGGA...GCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCTGCCACAGCTCTGCCTaGAGATGTGTCACTATCGGG +
Preference number: 4 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVCHSSA*RCVTIG
Trigger: CCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCA...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCGTCCAACTGCCTGTCTaGCTGGGTTTCTTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: FSINKQLSAVGRLVPASPVQLPV*LGFFFL
Trigger: TAAAAAGAAGAAACCCAGGCAGACAGGCAGTTGGAC...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR GCA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCTCCTTTGCACTGACTTaGGGTCAGCCCGGTAGACCT +
Preference number: 4 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVSFALT*GQPGRP
Trigger: AGGTCTACCGGGCTGACCGCAAGTCAGTGCAAAGGA...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCGAGCCTTGATCCTTTaGACTGACTTGCGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVRALIL*TDLRSA
Trigger: GGCTGACCGCAAGTCAGTGCAAAGGATCAAGGCTCG...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGAAGACCTCACAGTCTATaGCCTCAAAGTGGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: REGDMFINRHMTRVWGTGRPHSL*PQSGCC
Trigger: ACAACACCCACTTTGAGGGCATAGACTGTGAGGTCT...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp GAAAGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACATCTTGTCCTGTTCTGTaGCAGCCATTTGGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: EREGDMFINRHMTRVWGTSCPVL*QPFGLG
Trigger: TCCGAGACCAAATGGCTGCCACAGAACAGGACAAGA...TGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTCATACTCCAGGAACCTaGCAGAGTCATCCAGGACCA +
Preference number: 4 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPHTPGT*QSHPGP
Trigger: TGGTCCTGGATGACTCTGCCAGGTTCCTGGAGTATG...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR TCA 90 bp AGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCTCCGTGGTTTTAGCATaGGCGGCCTCCATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RLFRRLFSINKQLSAVGRSVVLA*AASIVL
Trigger: GAGCACAATGGAGGCCGCTCATGCTAAAACCACGGA...GCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395503.9
CDS-3UTR TCA 90 bp AGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCTCAGCTGGCTGTAGTTaGCATGAGGCCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: RLFRRLFSINKQLSAVGRSAGCS*HEAHPQ
Trigger: CTGAGGATGGGCCTCATGTCAACTACAGCCAGCTGA...GCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395503.9
CDS-3UTR GCA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCTCATCCAGCTTCTGCTaGAAGGGGGTCTTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVSSSFC*KGVLSC
Trigger: ACAGGACAAGACCCCCTTGCAGCAGAAGCTGGATGA...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTAATGGCATTCTTCTTTaGCATCCGACGGGTACCCAG +
Preference number: 4 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPNGILL*HPTGTQ
Trigger: CTGGGTACCCGTCGGATGGCAAAGAAGAATGCCATT...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp ATAAACATCCTGAATCCTGGGCAAACGCAACAGAGACTGGGCTTTTCATTCCCGTCAGTGGAAGACCCTTaGAGACAGACATCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: INILNPGQTQQRLGFSFPSVEDP*RQTSGW
Trigger: CCAACCAGATGTCTGTCTGCAAGGGTCTTCCACTGA...CGGGAATGAAAAGCCCAGTCTCTGTTGCGTTTGCCCAGGATTCAGGATGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564470.1
CDS-3UTR CCA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTTCTTGTCCTGTTCTGTaGCAGCCATTTGGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPSCPVL*QPFGLG
Trigger: TCCGAGACCAAATGGCTGCCACAGAACAGGACAAGA...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCTCTATGCCCTCAAAGTaGGTGTTGTCCTCGGTGCAC +
Preference number: 4 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVSMPSK*VLSSVH
Trigger: GTGCACCGAGGACAACACCCACTTTGAGGGCATAGA...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CCA 90 bp TCCTGGGCAAACGCAACAGAGACTGGGCTTTTCATTCCCGAGAAGAGAGATGGTAAACATCCTGAATCCTaGGCAAACGCAACAGAGACT +
Preference number: 4 (lower is better)
Translates to: SWANATETGLFIPEKRDGKHPES*ANATET
Trigger: AGTCTCTGTTGCGTTTGCCCAGGATTCAGGATGTTT...ACCATCTCTCTTCTCGGGAATGAAAAGCCCAGTCTCTGTTGCGTTTGCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564470.1
CDS-3UTR GCA 90 bp AGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCTCATCCAGCTTCTGCTaGAAGGGGGTCTTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: RLFRRLFSINKQLSAVGRSSSFC*KGVLSC
Trigger: ACAGGACAAGACCCCCTTGCAGCAGAAGCTGGATGA...GCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395503.9
CDS-3UTR CCA 90 bp AGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTGCCCTGGCCGGACTaGCTTATCATTCTTCAAGAC +
Preference number: 4 (lower is better)
Translates to: RLFRRLFSINKQLSAVGRLPWPD*LIILQD
Trigger: GTCTTGAAGAATGATAAGCCAGTCCGGCCAGGGCAG...GCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395503.9
CDS-3UTR CCA 90 bp AGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCTCCTTCTTCATTAGCTaGCGGATCACCGAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RLFRRLFSINKQLSAVGRSFFIS*RITELQ
Trigger: CTGCAACTCGGTGATCCGCCAGCTAATGAAGAAGGA...GCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395503.9
CDS-3UTR TCA 90 bp TTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCTTCTCACATCCGTGTTaGACACATTCATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LFSINKQLSAVGRLVPASFSHPC*THSSSP
Trigger: TGGAGAAGATGAATGTGTTCAACACGGATGTGAGAA...GCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR GCA 90 bp AGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCTCTGTGCCACAGCTCTaGCTGAAGATGTGTCACTAT +
Preference number: 4 (lower is better)
Translates to: RLFRRLFSINKQLSAVGRSVPQL*LKMCHY
Trigger: ATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGA...GCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395503.9
CDS-3UTR CCA 90 bp GAACTCATTCAGGAGGCAGATGTCCCCATCCACCTTGTCAATGATAAACATCCTTCCCGAGAAGAGAGATaGTTAAGATGGGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: ELIQEADVPIHLVNDKHPSREER*LRWVPR
Trigger: TCTTGGAACCCATCTTAACCATCTCTCTTCTCGGGA...AGGATGTTTATCATTGACAAGGTGGATGGGGACATCTGCCTCCTGAATGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564470.1
CDS-3UTR CCA 90 bp GATGGAGAACTCATTCAGGAGGCAGATGTCCCCATCCACCTTGTCAATGATAAAAAACGCAACAGAGACTaGGCTTTTCATTCCCGAGAA +
Preference number: 4 (lower is better)
Translates to: DGELIQEADVPIHLVNDKKRNRD*AFHSRE
Trigger: TTCTCGGGAATGAAAAGCCCAGTCTCTGTTGCGTTT...TTTATCATTGACAAGGTGGATGGGGACATCTGCCTCCTGAATGAGTTCTCCATC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000564470.1
CDS-3UTR CCA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCAACTGCCTGTCTGCCTaGGTTTCTTCTTTTTACTCT +
Preference number: 4 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVNCLSA*VSSFYS
Trigger: AGAGTAAAAAGAAGAAACCCAGGCAGACAGGCAGTT...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR CCA 90 bp AGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCAACTGCCTGTCTGCCTaGGTTTCTTCTTTTTACTCT +
Preference number: 4 (lower is better)
Translates to: RLFRRLFSINKQLSAVGRNCLSA*VSSFYS
Trigger: AGAGTAAAAAGAAGAAACCCAGGCAGACAGGCAGTT...GCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395503.9
CDS-3UTR CAA 90 bp GGTGTGGGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCAGAGCCCGTGACCTCCTaGCGCGGAGGGTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: GVGDRTGVCATALPEDVSEPVTS*RGGSSM
Trigger: CATGCTGGACCCTCCGCGCAAGGAGGTCACGGGCTC...TGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCCCACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGCGCAGTCGGTCGCCTaGTCCCTGCAAGCCCCTCGG +
Preference number: 5 (lower is better)
Translates to: GWEGEFTRLRGRRVAEGEAQSVA*SLQAPR
Trigger: CCGAGGGGCTTGCAGGGACAAGGCGACCGACTGCGC...TTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGTGTGGGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACGGGCGCCGGGCTCCTaGGAGTCATCATCACACCGC +
Preference number: 5 (lower is better)
Translates to: GVGDRTGVCATALPEDVSRAPGS*ESSSHR
Trigger: GCGGTGTGATGATGACTCCAAGGAGCCCGGCGCCCG...TGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCCCACACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000536376.5
CDS-3UTR CAA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGGAGCCCGTGACCTCCTaGCGCGGAGGGTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: DRTGVCATALPEDVSLSGEPVTS*RGGSSM
Trigger: CATGCTGGACCCTCCGCGCAAGGAGGTCACGGGCTC...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp CCCTCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGATCCAGGGCCCGGAGCTaGAAGATCATCGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: PSGLGRGIYKVEREAGGRSRARS*KIIGRG
Trigger: CCCCCTGCCGATGATCTTCAAGCTCCGGGCCCTGGA...TCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGCGCAGTCGGTCGCCTaGTCCCTGCAAGCCCCTCGG +
Preference number: 5 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKAQSVA*SLQAPR
Trigger: CCGAGGGGCTTGCAGGGACAAGGCGACCGACTGCGC...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp CCCTCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGATGGCGGATCACCGAGTaGCAGGCGTTGGCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: PSGLGRGIYKVEREAGGRWRITE*QALALS
Trigger: GGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCCA...TCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GATCACCGCCATGATCTTTTCCTTCACCGGCCCCGTCAGTGGCACCCGGGTGGTTGGCGGATCACCGAGTaGCAGGCGTTGGCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: DHRHDLFLHRPRQWHPGGWRITE*QALALS
Trigger: GGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCCA...ACCACCCGGGTGCCACTGACGGGGCCGGTGAAGGAAAAGATCATGGCGGTGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CAA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGTCCAGGGCCCGGAGCTaGAAGATCATCGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRSRARS*KIIGRG
Trigger: CCCCCTGCCGATGATCTTCAAGCTCCGGGCCCTGGA...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS GCA 90 bp CCTGTTCTGTGGCAGCCATTTGGTCTCGGATCTTCCCAATCTCGGTaGCCACACCAGTGGTGGCCACGATGCCCAAGGCCTTGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: PVLWQPFGLGSSQSR*PHQWWPRCPRPCRL
Trigger: CAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCGAGATTGGGAAGATCCGAGACCAAATGGCTGCCACAGAACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS CCA 90 bp CCATTTGGTCTCGGATCTTCCCAATCTCGGTGCCCACACCAGTGGTaGCCACGATGCCCAAGGCCTTGCCGGCTGCAATGTTGGTGCCCG +
Preference number: 5 (lower is better)
Translates to: PFGLGSSQSRCPHQW*PRCPRPCRLQCWCP
Trigger: CGGGCACCAACATTGCAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCGAGATTGGGAAGATCCGAGACCAAATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGCAGATTCCGCTTAACTaGGTCCGGGGTGAGGCCCGT +
Preference number: 5 (lower is better)
Translates to: SGLGRGIYKVEREAGGRGQIPLN*VRGEAR
Trigger: ACGGGCCTCACCCCGGACCAAGTTAAGCGGAATCTG...CCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR CAA 90 bp GGTGTGGGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACAGATTCCGCTTAACTaGGTCCGGGGTGAGGCCCGT +
Preference number: 5 (lower is better)
Translates to: GVGDRTGVCATALPEDVSQIPLN*VRGEAR
Trigger: ACGGGCCTCACCCCGGACCAAGTTAAGCGGAATCTG...TGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCCCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR CAA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGACGATGCCCAAGGCCTaGCCGGCTGCAATGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGTMPKA*PAAMLV
Trigger: CACCAACATTGCAGCCGGCAAGGCCTTGGGCATCGT...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGTGGCGGATCACCGAGTaGCAGGCGTTGGCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRWRITE*QALALS
Trigger: GGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCCA...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS GCA 90 bp CTCGGATCTTCCCAATCTCGGTGCCCACACCAGTGGTGGCCACGATaGCCAAGGCCTTGCCGGCTGCAATGTTGGTGCCCGAGAAAAGCA +
Preference number: 5 (lower is better)
Translates to: LGSSQSRCPHQWWPR*PRPCRLQCWCPRKA
Trigger: TGCTTTTCTCGGGCACCAACATTGCAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCGAGATTGGGAAGATCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS GCA 90 bp GTTGACATGAGGCCCATCCTCAGCGTACAGGAACCACCAGGCAGCTaGTCCCACGGTGGCTGCACCCACATAGCCCCCGATTGCCATGTA +
Preference number: 5 (lower is better)
Translates to: VDMRPILSVQEPPGS*SHGGCTHIAPDCHV
Trigger: TACATGGCAATCGGGGGCTATGTGGGTGCAGCCACCGTGGGAGCAGCTGCCTGGTGGTTCCTGTACGCTGAGGATGGGCCTCATGTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS CCA 90 bp CAGCCATTTGGTCTCGGATCTTCCCAATCTCGGTGCCCACACCAGTaGTGGCCACGATGCCCAAGGCCTTGCCGGCTGCAATGTTGGTGC +
Preference number: 5 (lower is better)
Translates to: QPFGLGSSQSRCPHQ*WPRCPRPCRLQCWC
Trigger: GCACCAACATTGCAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCGAGATTGGGAAGATCCGAGACCAAATGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS CCA 90 bp TCGAGCCCAATGACTGGCAGTGAGATCTTGAGGACCATGAGCCACTaGGTGAGGTCCAGGGCCCGGAGCTTGAAGATCATCGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: SSPMTGSEILRTMSH*VRSRARSLKIIGRG
Trigger: CCCCCTGCCGATGATCTTCAAGCTCCGGGCCCTGGACCTCACCCAGTGGCTCATGGTCCTCAAGATCTCACTGCCAGTCATTGGGCTCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGCCCTCAGGGGCACCCTaGACAAACATCTTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGPSGAP*TNILLP
Trigger: GGGCAACAAGATGTTTGTCAAGGGTGCCCCTGAGGG...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp ATCACCGCCATGATCTTTTCCTTCACCGGCCCCGTCAGTGGCACCCGGGTGGTGCCCTCAGGGGCACCCTaGACAAACATCTTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: ITAMIFSFTGPVSGTRVVPSGAP*TNILLP
Trigger: GGGCAACAAGATGTTTGTCAAGGGTGCCCCTGAGGG...CACCACCCGGGTGCCACTGACGGGGCCGGTGAAGGAAAAGATCATGGCGGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CAA 90 bp GGTGTGGGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCATCCACAATCTTGGACTaGTGCGAGGGCTCCACACGG +
Preference number: 5 (lower is better)
Translates to: GVGDRTGVCATALPEDVSSTILD*CEGSTR
Trigger: CCGTGTGGAGCCCTCGCACAAGTCCAAGATTGTGGA...TGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCCCACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGAGGGCAGGGGCGTCATaGACGCCATCACCTGTCATG +
Preference number: 5 (lower is better)
Translates to: DRTGVCATALPEDVSLSGRAGAS*TPSPVM
Trigger: CATGACAGGTGATGGCGTCAATGACGCCCCTGCCCT...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGCCCTCAAAGTGGGTGTaGTCCTCGGTGCACTGCATG +
Preference number: 5 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGPSKWV*SSVHCM
Trigger: CATGCAGTGCACCGAGGACAACACCCACTTTGAGGG...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGCATGAGCGGCCTCCATaGTGCTCCCTTCCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGHERPP*CSLPGG
Trigger: GCCCCCAGGAAGGGAGCACAATGGAGGCCGCTCATG...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR CAA 90 bp GGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGCGCAGCGTGGTGGATTaGATGGCGAGGATTCGGATG +
Preference number: 5 (lower is better)
Translates to: GDRTGVCATALPEDVSLSRSVVD*MARIRM
Trigger: CATCCGAATCCTCGCCATCAAATCCACCACGCTGCG...CGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAACGATGCCCAAGGCCTaGCCGGCTGCAATGTTGGTG +
Preference number: 5 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKTMPKA*PAAMLV
Trigger: CACCAACATTGCAGCCGGCAAGGCCTTGGGCATCGT...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAATGCTGCAAGGGGGTCTaGTCCTGTTCTGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKCCKGV*SCSVAA
Trigger: GGCTGCCACAGAACAGGACAAGACCCCCTTGCAGCA...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TCGGGGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGTCCAAGGAGGAGTCATaGCAGAGGGCACAGATGGTG +
Preference number: 5 (lower is better)
Translates to: SGLGRGIYKVEREAGGRGSKEES*QRAQMV
Trigger: CACCATCTGTGCCCTCTGCAATGACTCCTCCTTGGA...CCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACCCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGGAGGACAGACCGAGTTGCAGGCGTaGGCTCTCTCCACCTTCGAG +
Preference number: 5 (lower is better)
Translates to: VCATALPEDVSLSGWGGQTELQA*ALSTFE
Trigger: CTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGGT...CTGTCCTCCCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGACCGAGTTGCAGGCGTaGGCTCTCTCCACCTTCGAG +
Preference number: 5 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKTELQA*ALSTFE
Trigger: CTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGGT...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGACCCTCAGGGGCACCCTaGACAAACATCTTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGPSGAP*TNILLP
Trigger: GGGCAACAAGATGTTTGTCAAGGGTGCCCCTGAGGG...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGTCCACAATCTTGGACTaGTGCGAGGGCTCCACACGG +
Preference number: 5 (lower is better)
Translates to: GDRTGVCATALPEDVSLSSTILD*CEGSTR
Trigger: CCGTGTGGAGCCCTCGCACAAGTCCAAGATTGTGGA...CGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTCCACAATCTTGGACTaGTGCGAGGGCTCCACACGG +
Preference number: 5 (lower is better)
Translates to: DRTGVCATALPEDVSLSGSTILD*CEGSTR
Trigger: CCGTGTGGAGCCCTCGCACAAGTCCAAGATTGTGGA...CCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGCCCTCAAAGTGGGTGTaGTCCTCGGTGCACTGCATG +
Preference number: 5 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRPSKWV*SSVHCM
Trigger: CATGCAGTGCACCGAGGACAACACCCACTTTGAGGG...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS TCA 90 bp CCGAGCAACGAACTTGAGGATTTCGTCGAGCCCAATGACTGGCAGTaGGATCTTGAGGACCATGAGCCACTGGGTGAGGTCCAGGGCCCG +
Preference number: 5 (lower is better)
Translates to: PSNELEDFVEPNDWQ*DLEDHEPLGEVQGP
Trigger: CGGGCCCTGGACCTCACCCAGTGGCTCATGGTCCTCAAGATCTCACTGCCAGTCATTGGGCTCGACGAAATCCTCAAGTTCGTTGCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGTCAGCAGGGAGCTCATaGAGGCCGTATTTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGSAGSS*RPYFSR
Trigger: TCTGGAGAAATACGGCCTCAATGAGCTCCCTGCTGA...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR CAA 90 bp TGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAACCCCCACGATGGCATaGGCAATGAGGATCAAGAGG +
Preference number: 5 (lower is better)
Translates to: WEGEFTRLRGRRVAEGEGTPTMA*AMRIKR
Trigger: CCTCTTGATCCTCATTGCCAATGCCATCGTGGGGGT...TCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGTGTGGGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCAACGATGTCCCGAGCCTaGATCCTTTGCACTGACTTG +
Preference number: 5 (lower is better)
Translates to: GVGDRTGVCATALPEDVSTMSRA*ILCTDL
Trigger: CAAGTCAGTGCAAAGGATCAAGGCTCGGGACATCGT...TGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCCCACACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGACGATGTCCCGAGCCTaGATCCTTTGCACTGACTTG +
Preference number: 5 (lower is better)
Translates to: GRGSVPQLCLKMCHYRGGTMSRA*ILCTDL
Trigger: CAAGTCAGTGCAAAGGATCAAGGCTCGGGACATCGT...CCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAATTGCCGGCTGCAATGTaGGTGCCCGAGAAAAGCATG +
Preference number: 5 (lower is better)
Translates to: GWEGEFTRLRGRRVAEGELPAAM*VPEKSM
Trigger: CATGCTTTTCTCGGGCACCAACATTGCAGCCGGCAA...TTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGATTGCCGGCTGCAATGTaGGTGCCCGAGAAAAGCATG +
Preference number: 5 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGLPAAM*VPEKSM
Trigger: CATGCTTTTCTCGGGCACCAACATTGCAGCCGGCAA...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp CCGGCCAGTGCCCCACTCCTTGATCACCGCCATGATCTTTTCCTTCACCGGCCCCAATGGCATTCTTCTTaGCCATCCGACGGGTACCCA +
Preference number: 5 (lower is better)
Translates to: PASAPLLDHRHDLFLHRPQWHSS*PSDGYP
Trigger: TGGGTACCCGTCGGATGGCAAAGAAGAATGCCATTG...GGGCCGGTGAAGGAAAAGATCATGGCGGTGATCAAGGAGTGGGGCACTGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CAA 90 bp GGGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGTCCAAGGAGGAGTCATaGCAGAGGGCACAGATGGTG +
Preference number: 5 (lower is better)
Translates to: GDRTGVCATALPEDVSLSSKEES*QRAQMV
Trigger: CACCATCTGTGCCCTCTGCAATGACTCCTCCTTGGA...CGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGTGGTGCCAACTCGCACATAGTTACAGCGGTCGATGACGCCCTCAGGGGCACCTTGACAAACATCTTGTaGCCCACAGCAGCCCGGGAA +
Preference number: 5 (lower is better)
Translates to: GGANSHIVTAVDDALRGTLTNIL*PTAARE
Trigger: TTCCCGGGCTGCTGTGGGCAACAAGATGTTTGTCAA...GGTGCCCCTGAGGGCGTCATCGACCGCTGTAACTATGTGCGAGTTGGCACCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CAA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAACCCTCAGGGGCACCCTaGACAAACATCTTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKPSGAP*TNILLP
Trigger: GGGCAACAAGATGTTTGTCAAGGGTGCCCCTGAGGG...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGGACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGCCAGTGCCCCACTCCTaGATCACCGCCATGATCTTT +
Preference number: 5 (lower is better)
Translates to: GTGRGSVPQLCLKMCHYRPVPHS*ITAMIF
Trigger: AAAGATCATGGCGGTGATCAAGGAGTGGGGCACTGG...CCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAACCAGTGCCCCACTCCTaGATCACCGCCATGATCTTT +
Preference number: 5 (lower is better)
Translates to: GWEGEFTRLRGRRVAEGEPVPHS*ITAMIF
Trigger: AAAGATCATGGCGGTGATCAAGGAGTGGGGCACTGG...TTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GCCCTCAGGGGCACCCTTGACAAACATCTTGTTGCCCACAGCAGCCCGGGAAGACCAGTGCCCCACTCCTaGATCACCGCCATGATCTTT +
Preference number: 5 (lower is better)
Translates to: ALRGTLDKHLVAHSSPGRPVPHS*ITAMIF
Trigger: AAAGATCATGGCGGTGATCAAGGAGTGGGGCACTGG...TCTTCCCGGGCTGCTGTGGGCAACAAGATGTTTGTCAAGGGTGCCCCTGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CAA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGAAGGTACTCCACAATCTaGGACTTGTGCGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGRYSTI*DLCEGS
Trigger: GGAGCCCTCGCACAAGTCCAAGATTGTGGAGTACCT...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAACTGGCAGTGAGATCTaGAGGACCATGAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: GWEGEFTRLRGRRVAEGETGSEI*RTMSHW
Trigger: CCAGTGGCTCATGGTCCTCAAGATCTCACTGCCAGT...TTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GAAAGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGCGCAGTCGGTCGCCTaGTCCCTGCAAGCCCCTCGG +
Preference number: 5 (lower is better)
Translates to: EREGDMFINRHMTRVWGTAQSVA*SLQAPR
Trigger: CCGAGGGGCTTGCAGGGACAAGGCGACCGACTGCGC...TGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS GCA 90 bp CAATCTCGGTGCCCACACCAGTGGTGGCCACGATGCCCAAGGCCTTaGCGGCTGCAATGTTGGTGCCCGAGAAAAGCATGTTCTTCTTGT +
Preference number: 5 (lower is better)
Translates to: QSRCPHQWWPRCPRP*RLQCWCPRKACSSC
Trigger: ACAAGAAGAACATGCTTTTCTCGGGCACCAACATTGCAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCGAGATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS CCA 90 bp AGGGCTAAGAAGCTCGCCTGGAGTCCAGAAACAGACTCGGCAAAGTaGGGGGCAGTTCAAGGGTTGGCTGCTTCAAGGAGAAAGCGCCTG +
Preference number: 5 (lower is better)
Translates to: RAKKLAWSPETDSAK*GAVQGLAASRRKRL
Trigger: CAGGCGCTTTCTCCTTGAAGCAGCCAACCCTTGAACTGCCCCCCACTTTGCCGAGTCTGTTTCTGGACTCCAGGCGAGCTTCTTAGCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562185.5
CDS-3UTR CAA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAACCCCCACGATGGCATaGGCAATGAGGATCAAGAGG +
Preference number: 5 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKTPTMA*AMRIKR
Trigger: CCTCTTGATCCTCATTGCCAATGCCATCGTGGGGGT...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAACGATGTCCCGAGCCTaGATCCTTTGCACTGACTTG +
Preference number: 5 (lower is better)
Translates to: WEGEFTRLRGRRVAEGEGTMSRA*ILCTDL
Trigger: CAAGTCAGTGCAAAGGATCAAGGCTCGGGACATCGT...TCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCATGTCTGCAGGGACTTaGTCCCCCACAGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVMSAGT*SPTATS
Trigger: GGAGGTGGCTGTGGGGGACAAAGTCCCTGCAGACAT...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGCAATGGCATTCTTCTTaGCCATCCGACGGGTACCCA +
Preference number: 5 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRQWHSS*PSDGYP
Trigger: TGGGTACCCGTCGGATGGCAAAGAAGAATGCCATTG...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGGGAACACCTTTGGCCTCGTaGAAGTCCAAGGAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: GEFTRLRGRRVAEGEGKGTPLAS*KSKEES
Trigger: TGACTCCTCCTTGGACTTCAACGAGGCCAAAGGTGT...TCCCTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp CCCGGGAAGATTTGGCTGGGGAGCAATAGACAGACATGGACTTTCTGTCTCGGGACCGAGTTGCAGGCGTaGGCTCTCTCCACCTTCGAG +
Preference number: 5 (lower is better)
Translates to: PGKIWLGSNRQTWTFCLGTELQA*ALSTFE
Trigger: CTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGGT...CCCGAGACAGAAAGTCCATGTCTGTCTATTGCTCCCCAGCCAAATCTTCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CAA 90 bp GGTTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAATTGACAAACATCTTGTaGCCCACAGCAGCCCGGGAA +
Preference number: 5 (lower is better)
Translates to: GWEGEFTRLRGRRVAEGELTNIL*PTAARE
Trigger: TTCCCGGGCTGCTGTGGGCAACAAGATGTTTGTCAA...TTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGAGGTACTCCACAATCTaGGACTTGTGCGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKRYSTI*DLCEGS
Trigger: GGAGCCCTCGCACAAGTCCAAGATTGTGGAGTACCT...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGAGGGCAGGGGCGTCATaGACGCCATCACCTGTCATG +
Preference number: 5 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGRAGAS*TPSPVM
Trigger: CATGACAGGTGATGGCGTCAATGACGCCCCTGCCCT...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAACTGGCAGTGAGATCTaGAGGACCATGAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: GRGIYKVEREAGGRGGRKTGSEI*RTMSHW
Trigger: CCAGTGGCTCATGGTCCTCAAGATCTCACTGCCAGT...TTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGGCAAGAAGGGGGTGATACCTGTGACACGGGCTCAGAGATGGAGGAGGGGGAATTCCGAGCAACGAACTaGAGGATTTCGTCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: GQEGGDTCDTGSEMEEGEFRATN*RISSSP
Trigger: TGGGCTCGACGAAATCCTCAAGTTCGTTGCTCGGAA...TTCCCCCTCCTCCATCTCTGAGCCCGTGTCACAGGTATCACCCCCTTCTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000564112.1
CDS-3UTR CAA 90 bp GAAAGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACACATGAGCGGCCTCCATaGTGCTCCCTTCCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: EREGDMFINRHMTRVWGTHERPP*CSLPGG
Trigger: GCCCCCAGGAAGGGAGCACAATGGAGGCCGCTCATG...TGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS-3UTR CAA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCTGCTGCAAGGGGGTCTaGTCCTGTTCTGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: FSINKQLSAVGRLVPASPCCKGV*SCSVAA
Trigger: GGCTGCCACAGAACAGGACAAGACCCCCTTGCAGCA...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTCCATGGACGGGGTCGTaGAAGTGGCCAATGTTGATA +
Preference number: 5 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGPWTGS*KWPMLI
Trigger: TATCAACATTGGCCACTTCAACGACCCCGTCCATGG...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGTTGACAAACATCTTGTaGCCCACAGCAGCCCGGGAA +
Preference number: 5 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKLTNIL*PTAARE
Trigger: TTCCCGGGCTGCTGTGGGCAACAAGATGTTTGTCAA...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGAGCCCGTGACCTCCTaGCGCGGAGGGTCCAGCATG +
Preference number: 5 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPEPVTS*RGGSSM
Trigger: CATGCTGGACCCTCCGCGCAAGGAGGTCACGGGCTC...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGTTCCGAGCAACGAACTaGAGGATTTCGTCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKFRATN*RISSSP
Trigger: TGGGCTCGACGAAATCCTCAAGTTCGTTGCTCGGAA...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTGGGGAGGACAGTTCCGAGCAACGAACTaGAGGATTTCGTCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: VCATALPEDVSLSGWGGQFRATN*RISSSP
Trigger: TGGGCTCGACGAAATCCTCAAGTTCGTTGCTCGGAA...CTGTCCTCCCCACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCATCCAGGGCCCGGAGCTaGAAGATCATCGGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: RLFSINKQLSAVGRLVPASRARS*KIIGRG
Trigger: CCCCCTGCCGATGATCTTCAAGCTCCGGGCCCTGGA...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGGTCCCATGGACGGGGTCGTaGAAGTGGCCAATGTTGATA +
Preference number: 5 (lower is better)
Translates to: GHVYKQTHDTGVGDRTGVPWTGS*KWPMLI
Trigger: TATCAACATTGGCCACTTCAACGACCCCGTCCATGG...GACCCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GATCACCGCCATGATCTTTTCCTTCACCGGCCCCGTCAGTGGCACCCGGGTGGTATGTCCCCATCCACCTaGTCAATGATAAACATCTTG +
Preference number: 5 (lower is better)
Translates to: DHRHDLFLHRPRQWHPGGMSPST*SMINIL
Trigger: CAAGATGTTTATCATTGACAAGGTGGATGGGGACAT...ACCACCCGGGTGCCACTGACGGGGCCGGTGAAGGAAAAGATCATGGCGGTGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CAA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCTCCAAGGAGGAGTCATaGCAGAGGGCACAGATGGTG +
Preference number: 5 (lower is better)
Translates to: FSINKQLSAVGRLVPASPSKEES*QRAQMV
Trigger: CACCATCTGTGCCCTCTGCAATGACTCCTCCTTGGA...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCATGGCGGATCACCGAGTaGCAGGCGTTGGCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: RLFSINKQLSAVGRLVPAWRITE*QALALS
Trigger: GGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCCA...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCACTGGCAGTGAGATCTaGAGGACCATGAGCCACTGG +
Preference number: 5 (lower is better)
Translates to: FSINKQLSAVGRLVPASPTGSEI*RTMSHW
Trigger: CCAGTGGCTCATGGTCCTCAAGATCTCACTGCCAGT...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGAACCCCCACGATGGCATaGGCAATGAGGATCAAGAGG +
Preference number: 5 (lower is better)
Translates to: REGDMFINRHMTRVWGTGTPTMA*AMRIKR
Trigger: CCTCTTGATCCTCATTGCCAATGCCATCGTGGGGGT...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAATGTCTGCAGGGACTTaGTCCCCCACAGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: RLFSINKQLSAVGRLVPAMSAGT*SPTATS
Trigger: GGAGGTGGCTGTGGGGGACAAAGTCCCTGCAGACAT...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GAAAGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACACGCAGCGTGGTGGATTaGATGGCGAGGATTCGGATG +
Preference number: 5 (lower is better)
Translates to: EREGDMFINRHMTRVWGTRSVVD*MARIRM
Trigger: CATCCGAATCCTCGCCATCAAATCCACCACGCTGCG...TGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCACGATGCCCAAGGCCTaGCCGGCTGCAATGTTGGTG +
Preference number: 5 (lower is better)
Translates to: LFSINKQLSAVGRLVPASTMPKA*PAAMLV
Trigger: CACCAACATTGCAGCCGGCAAGGCCTTGGGCATCGT...GCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGGAGGACAGAGCAAAAGGATGCTCACTTCCTTCTTTCATCTTCTGGATCTGTGTGCTGCAAGGGGGTCTaGTCCTGTTCTGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GRTEQKDAHFLLSSSGSVCCKGV*SCSVAA
Trigger: GGCTGCCACAGAACAGGACAAGACCCCCTTGCAGCA...CACAGATCCAGAAGATGAAAGAAGGAAGTGAGCATCCTTTTGCTCTGTCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GCTGGCGGATCACCGAGTTGCAGGCGTTGGCTCTCTCCACCTTCGAGAGGCTTCTCAATGATAAACATCTaGCAGACAGACATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: AGGSPSCRRWLSPPSRGFSMINI*QTDIWL
Trigger: CAACCAGATGTCTGTCTGCAAGATGTTTATCATTGA...GAAGCCTCTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGGTGATCCGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CAA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGATGTCCCCATCCACCTaGTCAATGATAAACATCTTG +
Preference number: 5 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRMSPST*SMINIL
Trigger: CAAGATGTTTATCATTGACAAGGTGGATGGGGACAT...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp ACAGGACGGGGGTCTGTGCCACAGCTCTGCCTGAAGATGTGTCACTATCGGGGTCTTCTCACATCCGTGTaGAACACATTCATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TGRGSVPQLCLKMCHYRGLLTSV*NTFIFS
Trigger: GGAGAAGATGAATGTGTTCAACACGGATGTGAGAAG...ACCCCGATAGTGACACATCTTCAGGCAGAGCTGTGGCACAGACCCCCGTCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCACCGAGTTGCAGGCGTaGGCTCTCTCCACCTTCGAG +
Preference number: 5 (lower is better)
Translates to: LFSINKQLSAVGRLVPASTELQA*ALSTFE
Trigger: CTCGAAGGTGGAGAGAGCCAACGCCTGCAACTCGGT...GCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCTTGACAAACATCTTGTaGCCCACAGCAGCCCGGGAA +
Preference number: 5 (lower is better)
Translates to: FSINKQLSAVGRLVPASPLTNIL*PTAARE
Trigger: TTCCCGGGCTGCTGTGGGCAACAAGATGTTTGTCAA...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCAGGGCAGGGGCGTCATaGACGCCATCACCTGTCATG +
Preference number: 5 (lower is better)
Translates to: LFSINKQLSAVGRLVPASRAGAS*TPSPVM
Trigger: CATGACAGGTGATGGCGTCAATGACGCCCCTGCCCT...GCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCTTCCGAGCAACGAACTaGAGGATTTCGTCGAGCCCA +
Preference number: 5 (lower is better)
Translates to: FSINKQLSAVGRLVPASPFRATN*RISSSP
Trigger: TGGGCTCGACGAAATCCTCAAGTTCGTTGCTCGGAA...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS TCA 90 bp TATCATTCTTCAAGACCTCTCCCTCTGGAGCGTAAGTGGAGCCGGTaGTGGAGAACTCATTCAGGAGGCAGATGTCCCCATCCACCTTGT +
Preference number: 5 (lower is better)
Translates to: YHSSRPLPLERKWSR*WRTHSGGRCPHPPC
Trigger: ACAAGGTGGATGGGGACATCTGCCTCCTGAATGAGTTCTCCATCACCGGCTCCACTTACGCTCCAGAGGGAGAGGTCTTGAAGAATGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCATGTCTGCAGGGACTTaGTCCCCCACAGCCACCTCC +
Preference number: 5 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVMSAGT*SPTATS
Trigger: GGAGGTGGCTGTGGGGGACAAAGTCCCTGCAGACAT...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGAACGGGCTCCGTGTGTTaGATGACAGATACAGACTCG +
Preference number: 5 (lower is better)
Translates to: REGDMFINRHMTRVWGTGTGSVC*MTDTDS
Trigger: CGAGTCTGTATCTGTCATCAAACACACGGAGCCCGT...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGTTGAAGTGGCCAATGTaGATAAGCCAGACAGCCACA +
Preference number: 5 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGLKWPM*ISQTAT
Trigger: TGTGGCTGTCTGGCTTATCAACATTGGCCACTTCAA...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTGGGAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGTCAATGATAAACATCTaGCAGACAGACATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: LGRGIYKVEREAGGRGGRSMINI*QTDIWL
Trigger: CAACCAGATGTCTGTCTGCAAGATGTTTATCATTGA...CCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GAAAGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACACCACATAGCCCCCGATaGCCATGTAGCGGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: EREGDMFINRHMTRVWGTPHSPR*PCSGRR
Trigger: TCTTCTTCCGCTACATGGCAATCGGGGGCTATGTGG...TGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCGCAGCGTGGTGGATTaGATGGCGAGGATTCGGATG +
Preference number: 5 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVRSVVD*MARIRM
Trigger: CATCCGAATCCTCGCCATCAAATCCACCACGCTGCG...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTTTGCCGGCTGCAATGTaGGTGCCCGAGAAAAGCATG +
Preference number: 5 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPLPAAM*VPEKSM
Trigger: CATGCTTTTCTCGGGCACCAACATTGCAGCCGGCAA...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCTTGAAGTGGCCAATGTaGATAAGCCAGACAGCCACA +
Preference number: 5 (lower is better)
Translates to: FSINKQLSAVGRLVPASPLKWPM*ISQTAT
Trigger: TGTGGCTGTCTGGCTTATCAACATTGGCCACTTCAA...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GAAGGGGAATTTACAAGGTTGAGAGGGAGGCGGGTGGCCGAGGGGGAAGGAAAGTCAATGATAAACATCTaGCAGACAGACATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: EGEFTRLRGRRVAEGEGKSMINI*QTDIWL
Trigger: CAACCAGATGTCTGTCTGCAAGATGTTTATCATTGA...CTTTCCTTCCCCCTCGGCCACCCGCCTCCCTCTCAACCTTGTAAATTCCCCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp CCCGGGAAGATTTGGCTGGGGAGCAATAGACAGACATGGACTTTCTGTCTCGGGCTTCTCACATCCGTGTaGAACACATTCATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PGKIWLGSNRQTWTFCLGLLTSV*NTFIFS
Trigger: GGAGAAGATGAATGTGTTCAACACGGATGTGAGAAG...CCCGAGACAGAAAGTCCATGTCTGTCTATTGCTCCCCAGCCAAATCTTCCCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS-3UTR CAA 90 bp CGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGGTACTCCACAATCTaGGACTTGTGCGAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: RLFSINKQLSAVGRLVPARYSTI*DLCEGS
Trigger: GGAGCCCTCGCACAAGTCCAAGATTGTGGAGTACCT...TGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTCCACATAGCCCCCGATaGCCATGTAGCGGAAGAAGA +
Preference number: 5 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPPHSPR*PCSGRR
Trigger: TCTTCTTCCGCTACATGGCAATCGGGGGCTATGTGG...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGGCAAACGCAACAGAGACTGGGCTTTTCATTCCCGAGAAGAGAGATGGTTAAGGTCAGTGGAAGACCCTaGCAGACAGACATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GQTQQRLGFSFPRREMVKVSGRP*QTDIWL
Trigger: CAACCAGATGTCTGTCTGCAAGGGTCTTCCACTGAC...CTTAACCATCTCTCTTCTCGGGAATGAAAAGCCCAGTCTCTGTTGCGTTTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564470.1
CDS-3UTR CAA 90 bp TCCTGGGCAAACGCAACAGAGACTGGGCTTTTCATTCCCGAGAAGAGAGATGGTCTGACCACACAGCCCTaGCTTCTCAGAACAGCAATT +
Preference number: 5 (lower is better)
Translates to: SWANATETGLFIPEKRDGLTTQP*LLRTAI
Trigger: AATTGCTGTTCTGAGAAGCAAGGGCTGTGTGGTCAG...ACCATCTCTCTTCTCGGGAATGAAAAGCCCAGTCTCTGTTGCGTTTGCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564470.1
CDS-3UTR CAA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTACGGGCTCCGTGTGTTaGATGACAGATACAGACTCG +
Preference number: 5 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPTGSVC*MTDTDS
Trigger: CGAGTCTGTATCTGTCATCAAACACACGGAGCCCGT...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGATTGAAGTGGCCAATGTaGATAAGCCAGACAGCCACA +
Preference number: 5 (lower is better)
Translates to: REGDMFINRHMTRVWGTGLKWPM*ISQTAT
Trigger: TGTGGCTGTCTGGCTTATCAACATTGGCCACTTCAA...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCATGGACGGGGTCGTaGAAGTGGCCAATGTTGATA +
Preference number: 5 (lower is better)
Translates to: LFSINKQLSAVGRLVPASPWTGS*KWPMLI
Trigger: TATCAACATTGGCCACTTCAACGACCCCGTCCATGG...GCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GGGAGGACAGAGCAAAAGGATGCTCACTTCCTTCTTTCATCTTCTGGATCTGTGCAATGGCATTCTTCTTaGCCATCCGACGGGTACCCA +
Preference number: 5 (lower is better)
Translates to: GRTEQKDAHFLLSSSGSVQWHSS*PSDGYP
Trigger: TGGGTACCCGTCGGATGGCAAAGAAGAATGCCATTG...CACAGATCCAGAAGATGAAAGAAGGAAGTGAGCATCCTTTTGCTCTGTCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp CGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTACACCTTTGGCCTCGTaGAAGTCCAAGGAGGAGTCA +
Preference number: 5 (lower is better)
Translates to: RRLFSINKQLSAVGRLVPTPLAS*KSKEES
Trigger: TGACTCCTCCTTGGACTTCAACGAGGCCAAAGGTGT...AGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCCTGCAAGCCCCCTTCTCACATCCGTGTaGAACACATTCATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FSINKQLSAVGRLVPASPLLTSV*NTFIFS
Trigger: GGAGAAGATGAATGTGTTCAACACGGATGTGAGAAG...GGGGCTTGCAGGGACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCACGGGCTCCGTGTGTTaGATGACAGATACAGACTCG +
Preference number: 5 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVTGSVC*MTDTDS
Trigger: CGAGTCTGTATCTGTCATCAAACACACGGAGCCCGT...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCCAATGGCATTCTTCTTaGCCATCCGACGGGTACCCA +
Preference number: 5 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVQWHSS*PSDGYP
Trigger: TGGGTACCCGTCGGATGGCAAAGAAGAATGCCATTG...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp AGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACGGGGTCAATGATAAACATCTaGCAGACAGACATCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RGHVYKQTHDTGVGDRTGSMINI*QTDIWL
Trigger: CAACCAGATGTCTGTCTGCAAGATGTTTATCATTGA...CCCCGTCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGACTTCTCACATCCGTGTaGAACACATTCATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: REGDMFINRHMTRVWGTGLLTSV*NTFIFS
Trigger: GGAGAAGATGAATGTGTTCAACACGGATGTGAGAAG...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp AGACTTTTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCCAGTGCCCCACTCCTaGATCACCGCCATGATCTTT +
Preference number: 5 (lower is better)
Translates to: RLFRRLFSINKQLSAVGRPVPHS*ITAMIF
Trigger: AAAGATCATGGCGGTGATCAAGGAGTGGGGCACTGG...GCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAAAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395503.9
CDS-3UTR CAA 90 bp TTCCGTCGTTTATTTTCAATAAATAAGCAGCTCAGCGCAGTCGGTCGCCTTGTCTTCTGTGGCAGCCATTaGGTCTCGGATCTTCCCAAT +
Preference number: 5 (lower is better)
Translates to: FRRLFSINKQLSAVGRLVFCGSH*VSDLPN
Trigger: ATTGGGAAGATCCGAGACCAAATGGCTGCCACAGAA...GACAAGGCGACCGACTGCGCTGAGCTGCTTATTTATTGAAAATAAACGACGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp AGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAGGAATGTCCCCATCCACCTaGTCAATGATAAACATCTTG +
Preference number: 5 (lower is better)
Translates to: REGDMFINRHMTRVWGTGMSPST*SMINIL
Trigger: CAAGATGTTTATCATTGACAAGGTGGATGGGGACAT...TCCTGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS-3UTR CAA 90 bp GAAAGGGAAGGGGACATGTTTATAAACAGACACATGACACGGGTGTGGGGGACAATGTCCCCATCCACCTaGTCAATGATAAACATCTTG +
Preference number: 5 (lower is better)
Translates to: EREGDMFINRHMTRVWGTMSPST*SMINIL
Trigger: CAAGATGTTTATCATTGACAAGGTGGATGGGGACAT...TGTCCCCCACACCCGTGTCATGTGTCTGTTTATAAACATGTCCCCTTCCCTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS TCA 90 bp AGGCAGATGTCCCCATCCACCTTGTCAATGATAAACATCCTGATCTaGCCACACAGCCCTTGCTTCTCAGAACAGCAATTTCTAGTTCAT +
Preference number: 5 (lower is better)
Translates to: RQMSPSTLSMINILI*PHSPCFSEQQFLVH
Trigger: ATGAACTAGAAATTGCTGTTCTGAGAAGCAAGGGCTGTGTGGTCAGATCAGGATGTTTATCATTGACAAGGTGGATGGGGACATCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565042.5
CDS-3UTR CAA 90 bp GGAGAACTCATTCAGGAGGCAGATGTCCCCATCCACCTTGTCAATGATAAACATATGTCCCCATCCACCTaGTCAATGATAAACATCCTG +
Preference number: 5 (lower is better)
Translates to: GELIQEADVPIHLVNDKHMSPST*SMINIL
Trigger: CAGGATGTTTATCATTGACAAGGTGGATGGGGACAT...ATGTTTATCATTGACAAGGTGGATGGGGACATCTGCCTCCTGAATGAGTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564470.1
CDS TCA 72 bp AGGCAAGGGGAGGGCCCCGGGTTAAGGTCTAGTGGGTaGAGGTCTGGGATGGAGCGCCCTGGACTCCGGCCT +
Preference number: 6 (lower is better)
Translates to: RQGEGPGLRSSG*RSGMERPGLRP
Trigger: AGGCCGGAGTCCAGGGCGCTCCATCCCAGACCTTCACCCACTAGACCTTAACCCGGGGCCCTCCCCTTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562185.5
CDS CCA 72 bp ATCATGATCACCCGGATCCCGGCGTCACGGCACAGCTaGATGGAGCCCGTGACCTCCTTGCGCGGAGGGTCC +
Preference number: 6 (lower is better)
Translates to: IMITRIPASRHS*MEPVTSLRGGS
Trigger: GGACCCTCCGCGCAAGGAGGTCACGGGCTCCATCCAGCTGTGCCGTGACGCCGGGATCCGGGTGATCATGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS GCA 72 bp TCCCAATCTCGGTGCCCACACCAGTGGTGGCCACGATaGCCAAGGCCTTGCCGGCTGCAATGTTGGTGCCCG +
Preference number: 6 (lower is better)
Translates to: SQSRCPHQWWPR*PRPCRLQCWCP
Trigger: CGGGCACCAACATTGCAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCGAGATTGGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS CCA 72 bp GGTCTCGGATCTTCCCAATCTCGGTGCCCACACCAGTaGTGGCCACGATGCCCAAGGCCTTGCCGGCTGCAA +
Preference number: 6 (lower is better)
Translates to: GLGSSQSRCPHQ*WPRCPRPCRLQ
Trigger: TTGCAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCGAGATTGGGAAGATCCGAGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS GCA 72 bp GTACAGGAACCACCAGGCAGCTGCTCCCACGGTGGCTaGACCCACATAGCCCCCGATTGCCATGTAGCGGAA +
Preference number: 6 (lower is better)
Translates to: VQEPPGSCSHGG*THIAPDCHVAE
Trigger: TTCCGCTACATGGCAATCGGGGGCTATGTGGGTGCAGCCACCGTGGGAGCAGCTGCCTGGTGGTTCCTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS CCA 72 bp CTCGGATCTTCCCAATCTCGGTGCCCACACCAGTGGTaGCCACGATGCCCAAGGCCTTGCCGGCTGCAATGT +
Preference number: 6 (lower is better)
Translates to: LGSSQSRCPHQW*PRCPRPCRLQC
Trigger: ACATTGCAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCGAGATTGGGAAGATCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS CCA 72 bp TGCACATCTCGATGGTCACCAGCACGGACAGGGCCATaGTCATGGGCTCGGGGGCCTCGAAGACCTCACAGT +
Preference number: 6 (lower is better)
Translates to: CTSRWSPARTGP*SWARGPRRPHS
Trigger: ACTGTGAGGTCTTCGAGGCCCCCGAGCCCATGACCATGGCCCTGTCCGTGCTGGTGACCATCGAGATGTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS CAA 72 bp GTGCCCACACCAGTGGTGGCCACGATGCCCAAGGCCTaGCCGGCTGCAATGTTGGTGCCCGAGAAAAGCATG +
Preference number: 6 (lower is better)
Translates to: VPTPVVATMPKA*PAAMLVPEKSM
Trigger: CATGCTTTTCTCGGGCACCAACATTGCAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS GCA 72 bp TGCCCACACCAGTGGTGGCCACGATGCCCAAGGCCTTaGCGGCTGCAATGTTGGTGCCCGAGAAAAGCATGT +
Preference number: 6 (lower is better)
Translates to: CPHQWWPRCPRP*RLQCWCPRKAC
Trigger: ACATGCTTTTCTCGGGCACCAACATTGCAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS GCA 72 bp TGGCAGCCATTTGGTCTCGGATCTTCCCAATCTCGGTaGCCACACCAGTGGTGGCCACGATGCCCAAGGCCT +
Preference number: 6 (lower is better)
Translates to: WQPFGLGSSQSR*PHQWWPRCPRP
Trigger: AGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCGAGATTGGGAAGATCCGAGACCAAATGGCTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS CAA 90 bp CCAATCTCGGTGCCCACACCAGTGGTGGCCACGATGCCCAAGGCCTaGCCGGCTGCAATGTTGGTGCCCGAGAAAAGCATGTTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: PISVPTPVVATMPKA*PAAMLVPEKSMFFL
Trigger: CAAGAAGAACATGCTTTTCTCGGGCACCAACATTGCAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTGGTGTGGGCACCGAGATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS GCA 72 bp ACCTTCCTCAAACCAGGCCAGCACGAAGGAAATGCATaGGGCCAGGAGGAGAATCCGCACCAGGAGGTCTTC +
Preference number: 6 (lower is better)
Translates to: TFLKPGQHEGNA*GQEENPHQEVF
Trigger: GAAGACCTCCTGGTGCGGATTCTCCTCCTGGCCGCATGCATTTCCTTCGTGCTGGCCTGGTTTGAGGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000562185.5
ENST00000563975.1
CDS CCA 72 bp CGGAACCAGGAGCCCCCATGGACGGGGTCGTTGAAGTaGCCAATGTTGATAAGCCAGACAGCCACACAGATG +
Preference number: 6 (lower is better)
Translates to: RNQEPPWTGSLK*PMLISQTATQM
Trigger: CATCTGTGTGGCTGTCTGGCTTATCAACATTGGCCACTTCAACGACCCCGTCCATGGGGGCTCCTGGTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS CAA 72 bp CTCATTGAGGCCGTATTTCTCCAGATTCCGCTTAACTaGGTCCGGGGTGAGGCCCGTGGTCTCACTCACCCC +
Preference number: 6 (lower is better)
Translates to: LIEAVFLQIPLN*VRGEARGLTHP
Trigger: GGGGTGAGTGAGACCACGGGCCTCACCCCGGACCAAGTTAAGCGGAATCTGGAGAAATACGGCCTCAATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS TCA 72 bp TTGGCACCTCTCCCTCTGGAGCGTAAGTGGAGCCGGTaGTGGAGAACTCATTCAGGAGGCAGATGTCCCCAT +
Preference number: 6 (lower is better)
Translates to: LAPLPLERKWSR*WRTHSGGRCPH
Trigger: ATGGGGACATCTGCCTCCTGAATGAGTTCTCCATCACCGGCTCCACTTACGCTCCAGAGGGAGAGGTGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564732.1
CDS GCA 72 bp ACCAGTGGTGGCCACGATGCCCAAGGCCTTGCCGGCTaGAATGTTGGTGCCCGAGAAAAGCATGTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: TSGGHDAQGLAG*NVGAREKHVLL
Trigger: AAGAAGAACATGCTTTTCTCGGGCACCAACATTGCAGCCGGCAAGGCCTTGGGCATCGTGGCCACCACTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS CCA 72 bp TCATTGAGGCCGTATTTCTCCAGATTCCGCTTAACTTaGTCCGGGGTGAGGCCCGTGGTCTCACTCACCCCA +
Preference number: 6 (lower is better)
Translates to: SLRPYFSRFRLT*SGVRPVVSLTP
Trigger: TGGGGTGAGTGAGACCACGGGCCTCACCCCGGACCAAGTTAAGCGGAATCTGGAGAAATACGGCCTCAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS CCA 72 bp ATGACTGGCAGTGAGATCTTGAGGACCATGAGCCACTaGGTGAGGTCCAGGGCCCGGAGCTTGAAGATCATC +
Preference number: 6 (lower is better)
Translates to: MTGSEILRTMSH*VRSRARSLKII
Trigger: GATGATCTTCAAGCTCCGGGCCCTGGACCTCACCCAGTGGCTCATGGTCCTCAAGATCTCACTGCCAGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS TCA 72 bp TCAAGACCTCTCCCTCTGGAGCGTAAGTGGAGCCGGTaGTGGAGAACTCATTCAGGAGGCAGATGTCCCCAT +
Preference number: 6 (lower is better)
Translates to: SRPLPLERKWSR*WRTHSGGRCPH
Trigger: ATGGGGACATCTGCCTCCTGAATGAGTTCTCCATCACCGGCTCCACTTACGCTCCAGAGGGAGAGGTCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS CCA 72 bp CAGTTCAAGGGTTGGCTGCTTCAAGGAGAAAGCGCCTaGGAGACTTCTGCCCCGGACAGGACTCTAACCTTT +
Preference number: 6 (lower is better)
Translates to: QFKGWLLQGESA*ETSAPDRTLTF
Trigger: AAAGGTTAGAGTCCTGTCCGGGGCAGAAGTCTCCCAGGCGCTTTCTCCTTGAAGCAGCCAACCCTTGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562185.5
CDS TCA 72 bp GAACTTGAGGATTTCGTCGAGCCCAATGACTGGCAGTaGGATCTTGAGGACCATGAGCCACTGGGTGAGGTC +
Preference number: 6 (lower is better)
Translates to: ELEDFVEPNDWQ*DLEDHEPLGEV
Trigger: GACCTCACCCAGTGGCTCATGGTCCTCAAGATCTCACTGCCAGTCATTGGGCTCGACGAAATCCTCAAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
CDS TCA 72 bp TCCACAAAACTCTGTGAAGGGCAGGGGTTCTTGGCCTaGGGTCAGTGGAAGACCCTTGCAGACAGACATCTG +
Preference number: 6 (lower is better)
Translates to: STKLCEGQGFLA*GQWKTLADRHL
Trigger: CAGATGTCTGTCTGCAAGGGTCTTCCACTGACCTCAGGCCAAGAACCCCTGCCCTTCACAGAGTTTTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000564470.1
ENST00000565042.5
CDS CAA 72 bp TCCCACAGGGTCTTCCCTTCCTCAGCAGGGAGCTCATaGAGGCCGTATTTCTCCAGATTCCGCTTAACTTGG +
Preference number: 6 (lower is better)
Translates to: SHRVFPSSAGSS*RPYFSRFRLTW
Trigger: CCAAGTTAAGCGGAATCTGGAGAAATACGGCCTCAATGAGCTCCCTGCTGAGGAAGGGAAGACCCTGTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357084.7
ENST00000395503.9
CDS CAA 72 bp TACAGCCTTTCTCACCCTGATCTGACCACACAGCCCTaGCTTCTCAGAACAGCAATTTCTAGTTCATGGGTG +
Preference number: 6 (lower is better)
Translates to: YSLSHPDLTTQP*LLRTAISSSWV
Trigger: CACCCATGAACTAGAAATTGCTGTTCTGAGAAGCAAGGGCTGTGTGGTCAGATCAGGGTGAGAAAGGCTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000564470.1
CDS CAA 72 bp GAGAACTCATTCAGGAGGCAGATGTCCCCATCCACCTaGTCAATGATAAACATCTTGCAGACAGACATCTGG +
Preference number: 6 (lower is better)
Translates to: ENSFRRQMSPST*SMINILQTDIW
Trigger: CCAGATGTCTGTCTGCAAGATGTTTATCATTGACAAGGTGGATGGGGACATCTGCCTCCTGAATGAGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357084.7
ENST00000395503.9
ENST00000536376.5
ENST00000564732.1
CDS TCA 72 bp TCCCCATCCACCTTGTCAATGATAAACATCCTGATCTaGCCACACAGCCCTTGCTTCTCAGAACAGCAATTT +
Preference number: 6 (lower is better)
Translates to: SPSTLSMINILI*PHSPCFSEQQF
Trigger: AAATTGCTGTTCTGAGAAGCAAGGGCTGTGTGGTCAGATCAGGATGTTTATCATTGACAAGGTGGATGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565042.5