RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000184743

Ensembl transcript IDs: ENST00000398868.8, ENST00000535789.1, ENST00000538786.1, ENST00000540699.1

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTAGCTCTTCCTGGATCGTCTCAGATCTGCCATTCCTCTGGATATaGACCTGTGGCCGTGGCAGAAACCCAGAAATCAGTAGGGGCTTG +
Preference number: 1 (lower is better)
Translates to: FSSSWIVSDLPFLWI*TCGRGRNPEISRGL
Trigger: CAAGCCCCTACTGATTTCTGGGTTTCTGCCACGGCCACAGGTTCATATCCAGAGGAATGGCAGATCTGAGACGATCCAGGAAGAGCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR GCA 90 bp TTATTACAGGGCCATGTTTTAGCTCTTCCTGGATCGTCTCAGATCTaGCATTCCTCTGGATATGAACCTGTGGCCGTGGCAGAAACCCAG +
Preference number: 1 (lower is better)
Translates to: LLQGHVLALPGSSQI*HSSGYEPVAVAETQ
Trigger: CTGGGTTTCTGCCACGGCCACAGGTTCATATCCAGAGGAATGGCAGATCTGAGACGATCCAGGAAGAGCTAAAACATGGCCCTGTAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR TCA 90 bp CCTTGGTACTTCCCATTCGATGAAGCAGTCTCTCTCTGTGGTCTCTaGACCACTATTTATAAAAGTGATGACTCCAGGACCACAGCCCAT +
Preference number: 1 (lower is better)
Translates to: PWYFPFDEAVSLCGL*TTIYKSDDSRTTAH
Trigger: ATGGGCTGTGGTCCTGGAGTCATCACTTTTATAAATAGTGGTTCAGAGACCACAGAGAGAGACTGCTTCATCGAATGGGAAGTACCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR TCA 90 bp ATGGAAAGCGGCAGAGCAACAGACACGACGCAAACAGGCACAGTCTaGGCATCTGAACCACAAGTAAAAGGTGAGAGAAGTAAAAGATAT +
Preference number: 1 (lower is better)
Translates to: MESGRATDTTQTGTV*ASEPQVKGERSKRY
Trigger: ATATCTTTTACTTCTCTCACCTTTTACTTGTGGTTCAGATGCTCAGACTGTGCCTGTTTGCGTCGTGTCTGTTGCTCTGCCGCTTTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR GCA 90 bp GGCAAGAGACCACCTATTCTAAACCTCAGGTACAAAGTGTCCACTTaGCTCCAGACAATACTGAATTGTACTTTCTCCTTGGTACTTCCC +
Preference number: 1 (lower is better)
Translates to: GKRPPILNLRYKVST*LQTILNCTFSLVLP
Trigger: GGGAAGTACCAAGGAGAAAGTACAATTCAGTATTGTCTGGAGGCAAGTGGACACTTTGTACCTGAGGTTTAGAATAGGTGGTCTCTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR TCA 90 bp CCCTATCCAAGGCACCATTTTACAAGCCAAGTAGAACACTGTGTGTaGTCCACTAATGAAACCAACCACCAGTACAAGGCAGTATTTTTG +
Preference number: 1 (lower is better)
Translates to: PYPRHHFTSQVEHCV*STNETNHQYKAVFL
Trigger: CAAAAATACTGCCTTGTACTGGTGGTTGGTTTCATTAGTGGATCACACACAGTGTTCTACTTGGCTTGTAAAATGGTGCCTTGGATAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR CCA 90 bp GCACCAACATTTCAGAAGCAAGCTTTCAAGTTAACAGTCAAAGCTTaGTTGGCATCACTGATAAATGCAAGTAAACAAGCTGGAATTTTT +
Preference number: 1 (lower is better)
Translates to: APTFQKQAFKLTVKA*LASLINASKQAGIF
Trigger: AAAAATTCCAGCTTGTTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGCTTGCTTCTGAAATGTTGGTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR GCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCACTGAGGCAGGAGAACTaGTTGAACCCGGCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSLRQEN*LNPAGR
Trigger: TCTGCCTGCCGGGTTCAAGCAGTTCTCCTGCCTCAG...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR CCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCAAAAATTAGCCAGGCGTaGTGGTGTACACCTGTAGTC +
Preference number: 2 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSKISQA*WCTPVV
Trigger: GACTACAGGTGTACACCACCACGCCTGGCTAATTTT...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR CCA 90 bp ACTGTAGTTCTGGCACACGAAATTTGCCCCAAAGAAAAATGTCTTTCAAAGCCCGAGTTGAGACCAGCCTaGTCAACATGGCGAAGCCCT +
Preference number: 2 (lower is better)
Translates to: TVVLAHEICPKEKCLSKPELRPA*STWRSP
Trigger: AGGGCTTCGCCATGTTGACCAGGCTGGTCTCAACTC...GGGCTTTGAAAGACATTTTTCTTTGGGGCAAATTTCGTGTGCCAGAACTACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR CAA 90 bp AAACCTCAGGTACAAAGTGTCCACTTGCCTCCAGACAATACTGAATaGTACTTTCTCCTTGGTACTTCCCATTCGATGAAGCAGTCTCTC +
Preference number: 2 (lower is better)
Translates to: KPQVQSVHLPPDNTE*YFLLGTSHSMKQSL
Trigger: GAGAGACTGCTTCATCGAATGGGAAGTACCAAGGAGAAAGTACAATTCAGTATTGTCTGGAGGCAAGTGGACACTTTGTACCTGAGGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR CAA 90 bp TGGCAAGAGACCACCTATTCTAAACCTCAGGTACAAAGTGTCCACTaGCCTCCAGACAATACTGAATTGTACTTTCTCCTTGGTACTTCC +
Preference number: 2 (lower is better)
Translates to: WQETTYSKPQVQSVH*PPDNTELYFLLGTS
Trigger: GGAAGTACCAAGGAGAAAGTACAATTCAGTATTGTCTGGAGGCAAGTGGACACTTTGTACCTGAGGTTTAGAATAGGTGGTCTCTTGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR TCA 90 bp CATTCCTTTTATTATGAGCCACTCTGGCTTTTCAAGGCACGTTTGCCTCTTTTTAAACGGCACCTTTCATaGGGTTATCCTCCATCCCCT +
Preference number: 2 (lower is better)
Translates to: HSFYYEPLWLFKARLPLFKRHLS*GYPPSP
Trigger: AGGGGATGGAGGATAACCTCATGAAAGGTGCCGTTT...AAAAAGAGGCAAACGTGCCTTGAAAAGCCAGAGTGGCTCATAATAAAAGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR CCA 90 bp CATTCCTTTTATTATGAGCCACTCTGGCTTTTCAAGGCACGTTTGCCTCTTTTTATGAACCTGTGGCCGTaGCAGAAACCCAGAAATCAG +
Preference number: 2 (lower is better)
Translates to: HSFYYEPLWLFKARLPLFMNLWP*QKPRNQ
Trigger: CTGATTTCTGGGTTTCTGCCACGGCCACAGGTTCAT...AAAAAGAGGCAAACGTGCCTTGAAAAGCCAGAGTGGCTCATAATAAAAGGAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR CCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCAGAAGAGGACTTCCTCTaGATAATTAAACCAAGGTCT +
Preference number: 2 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSEEDFL*IIKPRS
Trigger: AGACCTTGGTTTAATTATCCAGAGGAAGTCCTCTTC...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR GCA 90 bp CATTCCTTTTATTATGAGCCACTCTGGCTTTTCAAGGCACGTTTGCCTCTTTTTACCACAGGAGAGGTCTaGTCATTTATTACAGGGCCA +
Preference number: 2 (lower is better)
Translates to: HSFYYEPLWLFKARLPLFTTGEV*SFITGP
Trigger: TGGCCCTGTAATAAATGAGCAGACCTCTCCTGTGGT...AAAAAGAGGCAAACGTGCCTTGAAAAGCCAGAGTGGCTCATAATAAAAGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR CCA 90 bp AAGAAATGTCAAGTTTCACCCGAAAACGGCACCTTTCATGAGGTTATCCTCCATTGTTTTAGCTCTTCCTaGATCGTCTCAGATCTGCCA +
Preference number: 2 (lower is better)
Translates to: KKCQVSPENGTFHEVILHCFSSS*IVSDLP
Trigger: TGGCAGATCTGAGACGATCCAGGAAGAGCTAAAACA...ATGGAGGATAACCTCATGAAAGGTGCCGTTTTCGGGTGAAACTTGACATTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR GCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCAAAAAATAGAGCAAGTTaGAACAAAACTGTCAGCCTA +
Preference number: 2 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSKNRAS*NKTVSL
Trigger: TAGGCTGACAGTTTTGTTGCAACTTGCTCTATTTTT...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR TCA 90 bp ACTGTAGTTCTGGCACACGAAATTTGCCCCAAAGAAAAATGTCTTTCAAAGCCCGCCATGTTGACAACTTaGGATGGAAGATCAAATCAT +
Preference number: 2 (lower is better)
Translates to: TVVLAHEICPKEKCLSKPAMLTT*DGRSNH
Trigger: ATGATTTGATCTTCCATCTCAAGTTGTCAACATGGC...GGGCTTTGAAAGACATTTTTCTTTGGGGCAAATTTCGTGTGCCAGAACTACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR CCA 90 bp CATTCCTTTTATTATGAGCCACTCTGGCTTTTCAAGGCACGTTTGCCTCTTTTTTTTTTCCACACTATGTaGCAACAGGATTCCCTATTG +
Preference number: 2 (lower is better)
Translates to: HSFYYEPLWLFKARLPLFFFHTM*QQDSLL
Trigger: CAATAGGGAATCCTGTTGCCACATAGTGTGGAAAAA...AAAAAGAGGCAAACGTGCCTTGAAAAGCCAGAGTGGCTCATAATAAAAGGAATG
40% GC, longest homopolymer 10 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR CCA 90 bp ACTGTAGTTCTGGCACACGAAATTTGCCCCAAAGAAAAATGTCTTTCAAAGCCCATTGTACTTTCTCCTTaGTACTTCCCATTCGATGAA +
Preference number: 2 (lower is better)
Translates to: TVVLAHEICPKEKCLSKPIVLSP*YFPFDE
Trigger: TTCATCGAATGGGAAGTACCAAGGAGAAAGTACAAT...GGGCTTTGAAAGACATTTTTCTTTGGGGCAAATTTCGTGTGCCAGAACTACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR CAA 90 bp CCAACATTTCAGAAGCAAGCTTTCAAGTTAACAGTCAAAGCTTGGTaGGCATCACTGATAAATGCAAGTAAACAAGCTGGAATTTTTCTA +
Preference number: 2 (lower is better)
Translates to: PTFQKQAFKLTVKAW*ASLINASKQAGIFL
Trigger: TAGAAAAATTCCAGCTTGTTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGCTTGCTTCTGAAATGTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR GCA 72 bp GGCCATGTTTTAGCTCTTCCTGGATCGTCTCAGATCTaGCATTCCTCTGGATATGAACCTGTGGCCGTGGCA +
Preference number: 3 (lower is better)
Translates to: GHVLALPGSSQI*HSSGYEPVAVA
Trigger: TGCCACGGCCACAGGTTCATATCCAGAGGAATGGCAGATCTGAGACGATCCAGGAAGAGCTAAAACATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR TCA 72 bp GGCAGAGCAACAGACACGACGCAAACAGGCACAGTCTaGGCATCTGAACCACAAGTAAAAGGTGAGAGAAGT +
Preference number: 3 (lower is better)
Translates to: GRATDTTQTGTV*ASEPQVKGERS
Trigger: ACTTCTCTCACCTTTTACTTGTGGTTCAGATGCTCAGACTGTGCCTGTTTGCGTCGTGTCTGTTGCTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR CAA 90 bp ACTGTAGTTCTGGCACACGAAATTTGCCCCAAAGAAAAATGTCTTTCAAAGCCCGAAAACGCCTGGGGATaGTACTGGCAAGAGACCACC +
Preference number: 3 (lower is better)
Translates to: TVVLAHEICPKEKCLSKPENAWG*YWQETT
Trigger: GGTGGTCTCTTGCCAGTACAATCCCCAGGCGTTTTC...GGGCTTTGAAAGACATTTTTCTTTGGGGCAAATTTCGTGTGCCAGAACTACAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR TCA 72 bp AGGCACCATTTTACAAGCCAAGTAGAACACTGTGTGTaGTCCACTAATGAAACCAACCACCAGTACAAGGCA +
Preference number: 3 (lower is better)
Translates to: RHHFTSQVEHCV*STNETNHQYKA
Trigger: TGCCTTGTACTGGTGGTTGGTTTCATTAGTGGATCACACACAGTGTTCTACTTGGCTTGTAAAATGGTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR TCA 72 bp TTCCCATTCGATGAAGCAGTCTCTCTCTGTGGTCTCTaGACCACTATTTATAAAAGTGATGACTCCAGGACC +
Preference number: 3 (lower is better)
Translates to: FPFDEAVSLCGL*TTIYKSDDSRT
Trigger: GGTCCTGGAGTCATCACTTTTATAAATAGTGGTTCAGAGACCACAGAGAGAGACTGCTTCATCGAATGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR TCA 72 bp TCAGGTACAAAGTGTCCACTTGCCTCCAGACAATACTaGATTGTACTTTCTCCTTGGTACTTCCCATTCGAT +
Preference number: 3 (lower is better)
Translates to: SGTKCPLASRQY*IVLSPWYFPFD
Trigger: ATCGAATGGGAAGTACCAAGGAGAAAGTACAATTCAGTATTGTCTGGAGGCAAGTGGACACTTTGTACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR GCA 72 bp CCACCTATTCTAAACCTCAGGTACAAAGTGTCCACTTaGCTCCAGACAATACTGAATTGTACTTTCTCCTTG +
Preference number: 3 (lower is better)
Translates to: PPILNLRYKVST*LQTILNCTFSL
Trigger: CAAGGAGAAAGTACAATTCAGTATTGTCTGGAGGCAAGTGGACACTTTGTACCTGAGGTTTAGAATAGGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR CAA 90 bp ACTGTAGTTCTGGCACACGAAATTTGCCCCAAAGAAAAATGTCTTTCAAAGCCCAGCCATGTTGACAACTaGAGATGGAAGATCAAATCA +
Preference number: 3 (lower is better)
Translates to: TVVLAHEICPKEKCLSKPSHVDN*RWKIKS
Trigger: TGATTTGATCTTCCATCTCAAGTTGTCAACATGGCT...GGGCTTTGAAAGACATTTTTCTTTGGGGCAAATTTCGTGTGCCAGAACTACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR CAA 90 bp GGAAGTGTGTTTAATAATTTGAAACCACAGGAGAGGTCTGCTCATTTATTACAGGGGCTTGTTGTGTTCTaGTTTGATCTTCACGTTAAG +
Preference number: 3 (lower is better)
Translates to: GSVFNNLKPQERSAHLLQGLVVF*FDLHVK
Trigger: CTTAACGTGAAGATCAAACAAGAACACAACAAGCCC...CTGTAATAAATGAGCAGACCTCTCCTGTGGTTTCAAATTATTAAACACACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR-3UTR CAA 90 bp GGAAGTGTGTTTAATAATTTGAAACCACAGGAGAGGTCTGCTCATTTATTACAGATCAGTAGGGGCTTGTaGTGTTCTTGTTTGATCTTC +
Preference number: 3 (lower is better)
Translates to: GSVFNNLKPQERSAHLLQISRGL*CSCLIF
Trigger: GAAGATCAAACAAGAACACAACAAGCCCCTACTGAT...CTGTAATAAATGAGCAGACCTCTCCTGTGGTTTCAAATTATTAAACACACTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR CCA 72 bp TTTCAGAAGCAAGCTTTCAAGTTAACAGTCAAAGCTTaGTTGGCATCACTGATAAATGCAAGTAAACAAGCT +
Preference number: 3 (lower is better)
Translates to: FQKQAFKLTVKA*LASLINASKQA
Trigger: AGCTTGTTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGCTTGCTTCTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR TCA 72 bp TATGTAAGCCAGAATGACACAGCCATGTTGACAACTTaGGATGGAAGATCAAATCATCCTAAATTACATTTC +
Preference number: 3 (lower is better)
Translates to: YVSQNDTAMLTT*DGRSNHPKLHF
Trigger: GAAATGTAATTTAGGATGATTTGATCTTCCATCTCAAGTTGTCAACATGGCTGTGTCATTCTGGCTTACATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR CAA 72 bp CCCTGGAAGGCCAAGACAGGCGGATTCCCAGAGGAGTaGAGACCAGCCTGGTCAACATGGCGAAGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: PWKAKTGGFPEE*RPAWSTWRSPV
Trigger: GACAGGGCTTCGCCATGTTGACCAGGCTGGTCTCAACTCCTCTGGGAATCCGCCTGTCTTGGCCTTCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCGGCCGGCGCCTAACGTaGAGACCAGGCCCCAGGCCG +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFGRRLT*RPGPRP
Trigger: CGGCCTGGGGCCTGGTCTGCACGTTAGGCGCCGGCC...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS-3UTR GCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGGGTCCTCCTGCGAGCTaGGGCCGGCGCCTAACGTGC +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTGPPAS*GRRLTC
Trigger: GCACGTTAGGCGCCGGCCGCAGCTCGCAGGAGGACC...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS-3UTR CCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGACGGGAAGGGGCGGGCTaGCTCGGGTCCTCCTGCGAG +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRREGAG*LGSSCE
Trigger: CTCGCAGGAGGACCCGAGCCAGCCCGCCCCTTCCCG...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS-3UTR GCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGGCCCGTGAACAGCACTaGAGGGGTTCGGAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTAREQH*RGSEGA
Trigger: AGCACCTTCCGAACCCCTGCAGTGCTGTTCACGGGC...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGACTGTTGGCGGGGCGCTaGGTGCTACCGTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRLLAGR*VLPSFG
Trigger: CCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAG...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS-3UTR GCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTGGCGGGGCGCTGAGTaGTACCGTCCTTTGGGAATT +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTWRGAE*YRPLGI
Trigger: AATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCA...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS-3UTR CCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCGCTGAGGGGACAACATaGAGCCTCCGCCTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFAEGTT*SLRLQS
Trigger: GCTTTGAAGGCGGAGGCTCCATGTTGTCCCCTCAGC...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCGCTTGCTGCTCTCCATaGCATCATCTGTTGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFACCSP*HHLLAG
Trigger: CCCCGCCAACAGATGATGCCATGGAGAGCAGCAAGC...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS-3UTR TCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAGCTGCTGCCACTCGCTaGGGGGACAACATGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLAAATR*GDNMEP
Trigger: AGGCTCCATGTTGTCCCCTCAGCGAGTGGCAGCAGC...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTGGTTCTCCGACGACTaGACTACAACTCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTWFSDD*TTTPSR
Trigger: CCTGCTGGGAGTTGTAGTTCAGTCGTCGGAGAACCA...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS-3UTR GCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCGCACTGGACCAGGCTTaGTGCTCTCCATGGCATCAT +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFALDQA*CSPWHH
Trigger: ATGATGCCATGGAGAGCAGCAAGCCTGGTCCAGTGC...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR GCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTCTCGGATGTGGTCCTaGAAGAGGATGCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTSRMWS*KRMLAK
Trigger: CTTGGCCAGCATCCTCTTGCAGGACCACATCCGAGA...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCCAGTGGCCTGAAGCATaGACTTGGGGTGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFQWPEA*TWGEAD
Trigger: ATCTGCCTCACCCCAAGTCCATGCTTCAGGCCACTG...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAATCTGGGGCGGGGCTTaGCGTGGTTCTCCGACGACT +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLIWGGA*RGSPTT
Trigger: AGTCGTCGGAGAACCACGCCAAGCCCCGCCCCAGAT...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS-3UTR CCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGATACTGCGCACTCATCTaGGGCGGGGCTTGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRYCALI*GGAWRG
Trigger: ACCACGCCAAGCCCCGCCCCAGATGAGTGCGCAGTA...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS-3UTR TCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCAACAGTCTTTCACAGTTaGCTGGCTGTCAAATGCCCC +
Preference number: 4 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSTVFHS*LAVKCP
Trigger: GGGGCATTTGACAGCCAGTCAACTGTGAAAGACTGT...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCGAAGCCAGTGAGGCCTaGGGCTATGTACAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFEASEA*GYVQSY
Trigger: GTAGCTTTGTACATAGCCTCAGGCCTCACTGGCTTC...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCAAAACGGCACCTTTCATaGGGTTATCCTCCATCCCCT +
Preference number: 4 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSKRHLS*GYPPSP
Trigger: AGGGGATGGAGGATAACCTCATGAAAGGTGCCGTTT...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGGATTCCCAGAGGAGTTaGGACCAGCCTGGTCAACAT +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTDSQRS*DQPGQH
Trigger: ATGTTGACCAGGCTGGTCTCAACTCCTCTGGGAATC...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGGGTCCTGCAAGAGGATaGTGGCCAAGGCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTGPARG*WPRLSH
Trigger: ATGAGAAAGCCTTGGCCAGCATCCTCTTGCAGGACC...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR GCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCTGGTCTTCCAACAACTaGATCCCTCACAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFWSSNN*IPHSGL
Trigger: CAGGCCACTGTGAGGGATGCAGTTGTTGGAAGACCA...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCCAAAACAACCTGCACTaGACCAGGCTTGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFQNNLH*TRLAAL
Trigger: GAGAGCAGCAAGCCTGGTCCAGTGCAGGTTGTTTTG...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCATCTTTCACAGTTGACTaGCTGTCAAATGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSSFTVD*LSNAPW
Trigger: CCAGGGGGCATTTGACAGCCAGTCAACTGTGAAAGA...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp AAGAAATGTCAAGTTTCACCCGAAAACGGCACCTTTCATGAGGTTATCCTCCATGAAGGCACCAGCCACTaGAACCACCACCACATCAAG +
Preference number: 4 (lower is better)
Translates to: KKCQVSPENGTFHEVILHEGTSH*NHHHIK
Trigger: CTTGATGTGGTGGTGGTTTCAGTGGCTGGTGCCTTC...ATGGAGGATAACCTCATGAAAGGTGCCGTTTTCGGGTGAAACTTGACATTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCGACGACCGTATTCTGTaGAGAGCTGCAGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFDDRIL*RAAAVE
Trigger: TTCAACAGCTGCAGCTCTTCACAGAATACGGTCGTC...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCCCGACAGGTGACCTTTaGGCCATTGATCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFPTGDL*AIDLLF
Trigger: GAAAAGGAGATCAATGGCTCAAAGGTCACCTGTCGG...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCAGTCCAACCATACAGTTaGACAACTGGGCTACAACCT +
Preference number: 4 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSVQPYS*TTGLQP
Trigger: AGGTTGTAGCCCAGTTGTTCAACTGTATGGTTGGAC...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp AAGAAATGTCAAGTTTCACCCGAAAACGGCACCTTTCATGAGGTTATCCTCCATGCACTGGACCAGGCTTaGTGCTCTCCATGGCATCAT +
Preference number: 4 (lower is better)
Translates to: KKCQVSPENGTFHEVILHALDQA*CSPWHH
Trigger: ATGATGCCATGGAGAGCAGCAAGCCTGGTCCAGTGC...ATGGAGGATAACCTCATGAAAGGTGCCGTTTTCGGGTGAAACTTGACATTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp CATTCCTTTTATTATGAGCCACTCTGGCTTTTCAAGGCACGTTTGCCTCTTTTTCTGGGAGGTGGAGGTTaGAGTGAGCGAGATTGCACC +
Preference number: 4 (lower is better)
Translates to: HSFYYEPLWLFKARLPLFLGGGG*SERDCT
Trigger: GGTGCAATCTCGCTCACTGCAACCTCCACCTCCCAG...AAAAAGAGGCAAACGTGCCTTGAAAAGCCAGAGTGGCTCATAATAAAAGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGAATCCCAGTGGTTTCTaGATCAGATCCCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTNPSGF*IRSPSP
Trigger: TGGAGAGGGGGATCTGATCCAGAAACCACTGGGATT...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCACTGTCAAATGCCCCCTaGGTATCCATCAGAACAACT +
Preference number: 4 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSLSNAP*VSIRTT
Trigger: AGTTGTTCTGATGGATACCCAGGGGGCATTTGACAG...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCTCTTTCACAGTTGACTaGCTGTCAAATGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFSFTVD*LSNAPW
Trigger: CCAGGGGGCATTTGACAGCCAGTCAACTGTGAAAGA...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTACATGGCATCATCTGTTaGCGGGGCGCTGAGTGCTAC +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLHGIIC*RGAECY
Trigger: GTAGCACTCAGCGCCCCGCCAACAGATGATGCCATG...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAGAAGGCACCAGCCACTaGAACCACCACCACATCAAG +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLREGTSH*NHHHIK
Trigger: CTTGATGTGGTGGTGGTTTCAGTGGCTGGTGCCTTC...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGGTCACCCAACCAATTTaGATGGCCACTTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTVTQPI*MATFLL
Trigger: CAGAAGGAAAGTGGCCATTCAAATTGGTTGGGTGAC...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCACCAGAGCAAGTTGTTTaGATTCACAGTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSPEQVV*IHSASP
Trigger: AGGAGAAGCACTGTGAATTCAAACAACTTGCTCTGG...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAAGCTACAATGCCCGTaGACAGCACTGCAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLKLQCP*TALQGF
Trigger: GAACCCCTGCAGTGCTGTTCACGGGCATTGTAGCTT...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAAAGCTACAATGCCCGTaGACAGCACTGCAGGGGTTC +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRKLQCP*TALQGF
Trigger: GAACCCCTGCAGTGCTGTTCACGGGCATTGTAGCTT...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGGTGGAATTACCGATATaGGAAGAAGCCTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTVELPI*EEACSN
Trigger: GTTGGAGCAGGCTTCTTCTCATATCGGTAATTCCAC...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp GCTTTCAAGTTAACAGTCAAAGCTTGGTTGGCATCACTGATAAATGCAAGTAAAGGCAGGAGAACTGCTTaGACCCGGCAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: AFKLTVKAWLASLINASKGRRTA*TRQAEV
Trigger: AACCTCTGCCTGCCGGGTTCAAGCAGTTCTCCTGCC...TTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTACTGGACCAGGCTTGCTaGTCTCCATGGCATCATCTG +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLLDQAC*SPWHHL
Trigger: CAGATGATGCCATGGAGAGCAGCAAGCCTGGTCCAG...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR GCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGATCCATCAGAACAACTaGAACCTTCTTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTIHQNN*NLLPTW
Trigger: CCAGGTGGGAAGAAGGTTGCAGTTGTTCTGATGGAT...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR GCA 90 bp GCTTTCAAGTTAACAGTCAAAGCTTGGTTGGCATCACTGATAAATGCAAGTAAAGCCCGTGAACAGCACTaGAGGGGTTCGGAAGGTGCT +
Preference number: 4 (lower is better)
Translates to: AFKLTVKAWLASLINASKAREQH*RGSEGA
Trigger: AGCACCTTCCGAACCCCTGCAGTGCTGTTCACGGGC...TTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp AAGAAATGTCAAGTTTCACCCGAAAACGGCACCTTTCATGAGGTTATCCTCCATTGGTCTTCCAACAACTaGATCCCTCACAGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: KKCQVSPENGTFHEVILHWSSNN*IPHSGL
Trigger: CAGGCCACTGTGAGGGATGCAGTTGTTGGAAGACCA...ATGGAGGATAACCTCATGAAAGGTGCCGTTTTCGGGTGAAACTTGACATTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCAAGATTTGAATCCCAGTaGTTTCTGGATCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSRFESQ*FLDQIP
Trigger: GGGGATCTGATCCAGAAACCACTGGGATTCAAATCT...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGACAAAGTCAGGGCTTGTaGCCACCTGGAGTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRQSQGL*PPGVLD
Trigger: ATCCAGGACTCCAGGTGGCCACAAGCCCTGACTTTG...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTACAGTGGCCTGAAGCATaGACTTGGGGTGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLQWPEA*TWGEAD
Trigger: ATCTGCCTCACCCCAAGTCCATGCTTCAGGCCACTG...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGACTTCACTCCAGATTTaGATCCCAGTGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTTSLQI*IPVVSG
Trigger: TCCAGAAACCACTGGGATTCAAATCTGGAGTGAAGT...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCCTGGCTTCTCCACAGTaGAAACTTCACTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFLASPQ*KLHSRF
Trigger: AAATCTGGAGTGAAGTTTTCACTGTGGAGAAGCCAG...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp AAGAAATGTCAAGTTTCACCCGAAAACGGCACCTTTCATGAGGTTATCCTCCATGACGACCGTATTCTGTaGAGAGCTGCAGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: KKCQVSPENGTFHEVILHDDRIL*RAAAVE
Trigger: TTCAACAGCTGCAGCTCTTCACAGAATACGGTCGTC...ATGGAGGATAACCTCATGAAAGGTGCCGTTTTCGGGTGAAACTTGACATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGGTAAGAGAAAGCAGGTaGCATCGGAGAAACATGAGT +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTVRESR*HRRNMS
Trigger: ACTCATGTTTCTCCGATGTCACCTGCTTTCTCTTAC...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAGGGTTCGGAAGGTGCTaGAGACGTTCTTGCTACCAT +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLGFGRC*RRSCYH
Trigger: ATGGTAGCAAGAACGTCTTCAGCACCTTCCGAACCC...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAGGGTTCGGAAGGTGCTaGAGACGTTCTTGCTACCAT +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRGFGRC*RRSCYH
Trigger: ATGGTAGCAAGAACGTCTTCAGCACCTTCCGAACCC...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAGAAGCCAGTGAGGCCTaGGGCTATGTACAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLEASEA*GYVQSY
Trigger: GTAGCTTTGTACATAGCCTCAGGCCTCACTGGCTTC...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGCATTCTTACTACTTCTaGACACAGAAAACGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTHSYYF*TQKTPG
Trigger: CCCAGGCGTTTTCTGTGTTCAGAAGTAGTAAGAATG...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCATGTTTCACCTGTATGTaGAAGATTTGGGGGTTCAAG +
Preference number: 4 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSCFTCM*KIWGFK
Trigger: CTTGAACCCCCAAATCTTTCACATACAGGTGAAACA...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAGGTCCTGCAAGAGGATaGTGGCCAAGGCTTTCTCAT +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRGPARG*WPRLSH
Trigger: ATGAGAAAGCCTTGGCCAGCATCCTCTTGCAGGACC...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR GCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGACGCTTATCCAAAAATaGCATTCCTCCTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTTLIQK*HSSLES
Trigger: GGACTCCAAGGAGGAATGGCATTTTTGGATAAGCGT...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR GCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGCTTATCCAAAAATaGCATTCCTCCTTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFTLIQK*HSSLES
Trigger: GGACTCCAAGGAGGAATGGCATTTTTGGATAAGCGT...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR GCA 90 bp GCTTTCAAGTTAACAGTCAAAGCTTGGTTGGCATCACTGATAAATGCAAGTAAACTGAGGCAGGAGAACTaGTTGAACCCGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: AFKLTVKAWLASLINASKLRQEN*LNPAGR
Trigger: TCTGCCTGCCGGGTTCAAGCAGTTCTCCTGCCTCAG...TTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATGCAGTGAGCGAGATTaGACCACTGCACTCCAACCT +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLCSERD*TTALQP
Trigger: AGGTTGGAGTGCAGTGGTGCAATCTCGCTCACTGCA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTACAAAACAACCTGCACTaGACCAGGCTTGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLQNNLH*TRLAAL
Trigger: GAGAGCAGCAAGCCTGGTCCAGTGCAGGTTGTTTTG...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp AAGAAATGTCAAGTTTCACCCGAAAACGGCACCTTTCATGAGGTTATCCTCCATCCTGCAAGAGGATGCTaGCCAAGGCTTTCTCATCTA +
Preference number: 4 (lower is better)
Translates to: KKCQVSPENGTFHEVILHPARGC*PRLSHL
Trigger: TAGATGAGAAAGCCTTGGCCAGCATCCTCTTGCAGG...ATGGAGGATAACCTCATGAAAGGTGCCGTTTTCGGGTGAAACTTGACATTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATGTTGGCTTCAGCAGTaGCCTGAAGCATGGACTTGG +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLCWLQQ*PEAWTW
Trigger: CCAAGTCCATGCTTCAGGCCACTGCTGAAGCCAACA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGACTGCATCCCTCACAGTaGCCTGAGTGGAATTACCGA +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRLHPSQ*PEWNYR
Trigger: TCGGTAATTCCACTCAGGCCACTGTGAGGGATGCAG...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGACTGGATATGAACCTGTaGCCGTGGCAGAAACCCAGA +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRLDMNL*PWQKPR
Trigger: TCTGGGTTTCTGCCACGGCCACAGGTTCATATCCAG...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTGTTTTAGCTCTTCCTaGATCGTCTCAGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTCFSSS*IVSDLP
Trigger: TGGCAGATCTGAGACGATCCAGGAAGAGCTAAAACA...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAGCCGAGGCTTTATCCTaGAACCACCAGTGTGAGAGA +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLAEALS*NHQCER
Trigger: TCTCTCACACTGGTGGTTCCAGGATAAAGCCTCGGC...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS-3UTR TCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCTGGCCACTTTCCTTCTaGGAATATAAGTATCGTAGC +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFWPLSF*EYKYRS
Trigger: GCTACGATACTTATATTCTCAGAAGGAAAGTGGCCA...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAACAGTCTTTCACAGTTaGCTGGCTGTCAAATGCCCC +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRTVFHS*LAVKCP
Trigger: GGGGCATTTGACAGCCAGTCAACTGTGAAAGACTGT...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGGACATCGGAGAAACATaGGTGAATGTGATTTCGAAC +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTDIGET*VNVISN
Trigger: GTTCGAAATCACATTCACTCATGTTTCTCCGATGTC...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAGCTGGTAACGAAAGCTaGAATCCTTCCCACCCATCT +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRAGNES*NPSHPS
Trigger: AGATGGGTGGGAAGGATTTCAGCTTTCGTTACCAGC...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAGCTGGTAACGAAAGCTaGAATCCTTCCCACCCATCT +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLAGNES*NPSHPS
Trigger: AGATGGGTGGGAAGGATTTCAGCTTTCGTTACCAGC...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCACCTAATACTTTAGTATaGGTTTTCGACACATCACCC +
Preference number: 4 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSPNTLV*VFDTSP
Trigger: GGGTGATGTGTCGAAAACTCATACTAAAGTATTAGG...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp GCTTTCAAGTTAACAGTCAAAGCTTGGTTGGCATCACTGATAAATGCAAGTAAATACGAAAATAAGGCATaGCTCAGCTGGGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AFKLTVKAWLASLINASKYENKA*LSWAGW
Trigger: CCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTA...TTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGATGACACAGCCATGTTaGCAACTTGAGATGGAAGAT +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTMTQPC*QLEMED
Trigger: ATCTTCCATCTCAAGTTGTCAACATGGCTGTGTCAT...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAGTACTTCCCATTCGATaGAGCAGTCTCTCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRVLPIR*SSLSLW
Trigger: CCACAGAGAGAGACTGCTTCATCGAATGGGAAGTAC...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp GGAAGTGTGTTTAATAATTTGAAACCACAGGAGAGGTCTGCTCATTTATTACAGTCTCGGATGTGGTCCTaGAAGAGGATGCTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GSVFNNLKPQERSAHLLQSRMWS*KRMLAK
Trigger: CTTGGCCAGCATCCTCTTGCAGGACCACATCCGAGA...CTGTAATAAATGAGCAGACCTCTCCTGTGGTTTCAAATTATTAAACACACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGATCAGTGCCTGTAACTaGTCTTTGAATTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTISACN*SLNSPA
Trigger: TGCTGGTGAATTCAAAGAGCAGTTACAGGCACTGAT...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR GCA 90 bp ACTGTAGTTCTGGCACACGAAATTTGCCCCAAAGAAAAATGTCTTTCAAAGCCCCCTCCCCATCGTGTGTaGAAAACCATGGAATCAATC +
Preference number: 4 (lower is better)
Translates to: TVVLAHEICPKEKCLSKPPPHRV*KTMESI
Trigger: GATTGATTCCATGGTTTTGCACACACGATGGGGAGG...GGGCTTTGAAAGACATTTTTCTTTGGGGCAAATTTCGTGTGCCAGAACTACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGAGCTATGGGAATCAATaGTACCTTCCCTTGCTCATA +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTSYGNQ*YLPLLI
Trigger: TATGAGCAAGGGAAGGTAGCATTGATTCCCATAGCT...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGATCAAGATCTCGGATGTaGTCCTGCAAGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRSRSRM*SCKRML
Trigger: CAGCATCCTCTTGCAGGACCACATCCGAGATCTTGA...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATCAAGATCTCGGATGTaGTCCTGCAAGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLSRSRM*SCKRML
Trigger: CAGCATCCTCTTGCAGGACCACATCCGAGATCTTGA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAATCCCAGTGGTTTCTaGATCAGATCCCCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLNPSGF*IRSPSP
Trigger: TGGAGAGGGGGATCTGATCCAGAAACCACTGGGATT...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp GGAAGTGTGTTTAATAATTTGAAACCACAGGAGAGGTCTGCTCATTTATTACAGCAAAGTCAGGGCTTGTaGCCACCTGGAGTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: GSVFNNLKPQERSAHLLQQSQGL*PPGVLD
Trigger: ATCCAGGACTCCAGGTGGCCACAAGCCCTGACTTTG...CTGTAATAAATGAGCAGACCTCTCCTGTGGTTTCAAATTATTAAACACACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCTATTATGAGCCACTCTaGCTTTTCAAGGCACGTTTG +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFYYEPL*LFKARL
Trigger: CAAACGTGCCTTGAAAAGCCAGAGTGGCTCATAATA...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp ACTGTAGTTCTGGCACACGAAATTTGCCCCAAAGAAAAATGTCTTTCAAAGCCCGTAATCCCTGCTACTTaGGAGGCTGAGGCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: TVVLAHEICPKEKCLSKPVIPAT*EAEAKE
Trigger: TTCTTTTGCCTCAGCCTCCCAAGTAGCAGGGATTAC...GGGCTTTGAAAGACATTTTTCTTTGGGGCAAATTTCGTGTGCCAGAACTACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAGCCTGGGGATTGTACTaGCAAGAGACCACCTATTCT +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLAWGLY*QETTYS
Trigger: AGAATAGGTGGTCTCTTGCCAGTACAATCCCCAGGC...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAGTCACCCAACCAATTTaGATGGCCACTTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLVTQPI*MATFLL
Trigger: CAGAAGGAAAGTGGCCATTCAAATTGGTTGGGTGAC...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCCCTGTAACTGCTCTTTaGATTCACCAGCAATATCTT +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFPVTAL*IHQQYL
Trigger: AAGATATTGCTGGTGAATTCAAAGAGCAGTTACAGG...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAGTCCAACCATACAGTTaGACAACTGGGCTACAACCT +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRVQPYS*TTGLQP
Trigger: AGGTTGTAGCCCAGTTGTTCAACTGTATGGTTGGAC...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAGTGGAATTACCGATATaGGAAGAAGCCTGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRVELPI*EEACSN
Trigger: GTTGGAGCAGGCTTCTTCTCATATCGGTAATTCCAC...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR GCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCGAAAATTTCATCCATTaGCAGACGACCGTATTCTGT +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFENFIH*QTTVFC
Trigger: ACAGAATACGGTCGTCTGGCAATGGATGAAATTTTC...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR GCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCATTCTTGCTACCATTGTaGTTGCAGAAGTTCTCATAT +
Preference number: 4 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSFLLPL*LQKFSY
Trigger: ATATGAGAACTTCTGCAAGCACAATGGTAGCAAGAA...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCTCCCTAGATCTGTTTTaGAAAGTTTCTGATATGGGG +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFSLDLF*KVSDMG
Trigger: CCCCATATCAGAAACTTTGCAAAACAGATCTAGGGA...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCCTGGCACACGAAATTTaGCCCAAAGAAAAATGTCTT +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFLAHEI*PKEKCL
Trigger: AAGACATTTTTCTTTGGGGCAAATTTCGTGTGCCAG...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp GCTTTCAAGTTAACAGTCAAAGCTTGGTTGGCATCACTGATAAATGCAAGTAAAGCTTGCTGCTCTCCATaGCATCATCTGCTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: AFKLTVKAWLASLINASKACCSP*HHLLLL
Trigger: CAAGAGGAGCAGATGATGCCATGGAGAGCAGCAAGC...TTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGACTGTCAAATGCCCCCTaGGTATCCATCAGAACAACT +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRLSNAP*VSIRTT
Trigger: AGTTGTTCTGATGGATACCCAGGGGGCATTTGACAG...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCGAAGAGGACTTCCTCTaGATAATTAAACCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFEEDFL*IIKPRS
Trigger: AGACCTTGGTTTAATTATCCAGAGGAAGTCCTCTTC...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAAAATTAGCCAGGCGTaGTGGTGTACACCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLKISQA*WCTPVV
Trigger: GACTACAGGTGTACACCACCACGCCTGGCTAATTTT...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp GCTTTCAAGTTAACAGTCAAAGCTTGGTTGGCATCACTGATAAATGCAAGTAAACACTGCACTTCAGCCTaGGTGACAGTACAAGAGTCC +
Preference number: 4 (lower is better)
Translates to: AFKLTVKAWLASLINASKHCTSA*VTVQES
Trigger: GGACTCTTGTACTGTCACCCAGGCTGAAGTGCAGTG...TTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCAATTGTACTTTCTCCTTaGTACTTCCCATTCGATGAA +
Preference number: 4 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSIVLSP*YFPFDE
Trigger: TTCATCGAATGGGAAGTACCAAGGAGAAAGTACAAT...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp CATTCCTTTTATTATGAGCCACTCTGGCTTTTCAAGGCACGTTTGCCTCTTTTTAACACAGAAAACGCCTaGGGATTGTACTGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: HSFYYEPLWLFKARLPLFNTENA*GLYWQE
Trigger: CTCTTGCCAGTACAATCCCCAGGCGTTTTCTGTGTT...AAAAAGAGGCAAACGTGCCTTGAAAAGCCAGAGTGGCTCATAATAAAAGGAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR CAA 72 bp GTACAAAGTGTCCACTTGCCTCCAGACAATACTGAATaGTACTTTCTCCTTGGTACTTCCCATTCGATGAAG +
Preference number: 4 (lower is better)
Translates to: VQSVHLPPDNTE*YFLLGTSHSMK
Trigger: CTTCATCGAATGGGAAGTACCAAGGAGAAAGTACAATTCAGTATTGTCTGGAGGCAAGTGGACACTTTGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAACTTCACTCCAGATTTaGATCCCAGTGGTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRTSLQI*IPVVSG
Trigger: TCCAGAAACCACTGGGATTCAAATCTGGAGTGAAGT...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp CATTCCTTTTATTATGAGCCACTCTGGCTTTTCAAGGCACGTTTGCCTCTTTTTCTGGCTTCTCCACAGTaGAAACTTCACTCCAGATTT +
Preference number: 4 (lower is better)
Translates to: HSFYYEPLWLFKARLPLFLASPQ*KLHSRF
Trigger: AAATCTGGAGTGAAGTTTTCACTGTGGAGAAGCCAG...AAAAAGAGGCAAACGTGCCTTGAAAAGCCAGAGTGGCTCATAATAAAAGGAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAGTAAGAGAAAGCAGGTaGCATCGGAGAAACATGAGT +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLVRESR*HRRNMS
Trigger: ACTCATGTTTCTCCGATGTCACCTGCTTTCTCTTAC...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp GGAAGTGTGTTTAATAATTTGAAACCACAGGAGAGGTCTGCTCATTTATTACAGCCGACAGGTGACCTTTaGGCCATTGATCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: GSVFNNLKPQERSAHLLQPTGDL*AIDLLF
Trigger: GAAAAGGAGATCAATGGCTCAAAGGTCACCTGTCGG...CTGTAATAAATGAGCAGACCTCTCCTGTGGTTTCAAATTATTAAACACACTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTACCAGAGCAAGTTGTTTaGATTCACAGTGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLPEQVV*IHSASP
Trigger: AGGAGAAGCACTGTGAATTCAAACAACTTGCTCTGG...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAAGGCACAAGTTCAAGTaGCTTATCAGAGGTCACATG +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRRHKFK*LIRGHM
Trigger: CATGTGACCTCTGATAAGTCACTTGAACTTGTGCCT...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAATTTGGGTAGGACTTTaGTCCTTGCTAAGGCAAAGC +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRIWVGL*SLLRQS
Trigger: GCTTTGCCTTAGCAAGGATCAAAGTCCTACCCAAAT...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTGTTTGAATTCACAGTaGTTCTCCTCTAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTCLNSQ*FSSRMS
Trigger: AGACATTCTAGAGGAGAAGCACTGTGAATTCAAACA...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR GCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCTTCTTGCTACCATTGTaGTTGCAGAAGTTCTCATAT +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFFLLPL*LQKFSY
Trigger: ATATGAGAACTTCTGCAAGCACAATGGTAGCAAGAA...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGATTTGAATCCCAGTaGTTTCTGGATCAGATCCCC +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLRFESQ*FLDQIP
Trigger: GGGGATCTGATCCAGAAACCACTGGGATTCAAATCT...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGATCACAGTGGCCTGAGTaGAATTACCGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRSQWPE*NYRYEK
Trigger: CTTCTCATATCGGTAATTCCACTCAGGCCACTGTGA...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATTAAAAATGCCTGCATaGAAAGCGGCAGAGCAACAG +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLLKMPA*KAAEQQ
Trigger: CTGTTGCTCTGCCGCTTTCCATGCAGGCATTTTTAA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR CAA 72 bp ACCACCTATTCTAAACCTCAGGTACAAAGTGTCCACTaGCCTCCAGACAATACTGAATTGTACTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TTYSKPQVQSVH*PPDNTELYFLL
Trigger: AAGGAGAAAGTACAATTCAGTATTGTCTGGAGGCAAGTGGACACTTTGTACCTGAGGTTTAGAATAGGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATGGCCACTTTCCTTCTaGGAATATAAGTATCGTAGC +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLWPLSF*EYKYRS
Trigger: GCTACGATACTTATATTCTCAGAAGGAAAGTGGCCA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR TCA 90 bp ACTGTAGTTCTGGCACACGAAATTTGCCCCAAAGAAAAATGTCTTTCAAAGCCCGTGTGTTTAATAATTTaGAACCACAGGAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TVVLAHEICPKEKCLSKPVCLII*NHRRGL
Trigger: CAGACCTCTCCTGTGGTTTCAAATTATTAAACACAC...GGGCTTTGAAAGACATTTTTCTTTGGGGCAAATTTCGTGTGCCAGAACTACAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp GGAAGTGTGTTTAATAATTTGAAACCACAGGAGAGGTCTGCTCATTTATTACAGCAAACAGGCACAGTCTaGGCATCTGAACCACAAGTA +
Preference number: 4 (lower is better)
Translates to: GSVFNNLKPQERSAHLLQQTGTV*ASEPQV
Trigger: TACTTGTGGTTCAGATGCTCAGACTGTGCCTGTTTG...CTGTAATAAATGAGCAGACCTCTCCTGTGGTTTCAAATTATTAAACACACTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAATATGTAAGCCAGAATaGCACAGCCATGTTGACAAC +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRICKPE*HSHVDN
Trigger: GTTGTCAACATGGCTGTGTCATTCTGGCTTACATAT...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp GGAAGTGTGTTTAATAATTTGAAACCACAGGAGAGGTCTGCTCATTTATTACAGATCCATCAGAACAACTaGAACCTTCTTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: GSVFNNLKPQERSAHLLQIHQNN*NLLPTW
Trigger: CCAGGTGGGAAGAAGGTTGCAGTTGTTCTGATGGAT...CTGTAATAAATGAGCAGACCTCTCCTGTGGTTTCAAATTATTAAACACACTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp CATTCCTTTTATTATGAGCCACTCTGGCTTTTCAAGGCACGTTTGCCTCTTTTTATCAGTGCCTGTAACTaGTCTTTGAATTCACCAGCA +
Preference number: 4 (lower is better)
Translates to: HSFYYEPLWLFKARLPLFISACN*SLNSPA
Trigger: TGCTGGTGAATTCAAAGAGCAGTTACAGGCACTGAT...AAAAAGAGGCAAACGTGCCTTGAAAAGCCAGAGTGGCTCATAATAAAAGGAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCAAAAATAGAGCAAGTTaGAACAAAACTGTCAGCCTA +
Preference number: 4 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFKNRAS*NKTVSL
Trigger: TAGGCTGACAGTTTTGTTGCAACTTGCTCTATTTTT...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp AAGAAATGTCAAGTTTCACCCGAAAACGGCACCTTTCATGAGGTTATCCTCCATAAAATTAAAAATGCCTaGATGGAAAGCGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KKCQVSPENGTFHEVILHKIKNA*MESGRA
Trigger: TGCTCTGCCGCTTTCCATGCAGGCATTTTTAATTTT...ATGGAGGATAACCTCATGAAAGGTGCCGTTTTCGGGTGAAACTTGACATTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp CATTCCTTTTATTATGAGCCACTCTGGCTTTTCAAGGCACGTTTGCCTCTTTTTCCTGTAACTGCTCTTTaGATTCACCAGCAATATCTT +
Preference number: 4 (lower is better)
Translates to: HSFYYEPLWLFKARLPLFPVTAL*IHQQYL
Trigger: AAGATATTGCTGGTGAATTCAAAGAGCAGTTACAGG...AAAAAGAGGCAAACGTGCCTTGAAAAGCCAGAGTGGCTCATAATAAAAGGAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp AAGAAATGTCAAGTTTCACCCGAAAACGGCACCTTTCATGAGGTTATCCTCCATTCATCAATTTACTGTTaGGAGAAAAGAGGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: KKCQVSPENGTFHEVILHSSIYC*EKRGQR
Trigger: TCTTTGGCCTCTTTTCTCTCAACAGTAAATTGATGA...ATGGAGGATAACCTCATGAAAGGTGCCGTTTTCGGGTGAAACTTGACATTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp ACTGTAGTTCTGGCACACGAAATTTGCCCCAAAGAAAAATGTCTTTCAAAGCCCGTATTTTTGTGTGTTTaGCCAAAGCGCTTTACTTCA +
Preference number: 4 (lower is better)
Translates to: TVVLAHEICPKEKCLSKPVFLCV*PKRFTS
Trigger: TGAAGTAAAGCGCTTTGGTCAAACACACAAAAATAC...GGGCTTTGAAAGACATTTTTCTTTGGGGCAAATTTCGTGTGCCAGAACTACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAGTTTTGCAAAGTTTCTaGTATGGGGTACTTAGGTCA +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRVLQSF*YGVLRS
Trigger: TGACCTAAGTACCCCATATCAGAAACTTTGCAAAAC...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp GGAAGTGTGTTTAATAATTTGAAACCACAGGAGAGGTCTGCTCATTTATTACAGGGATCGTCTCAGATCTaGCATTCCTCTGGATATGAA +
Preference number: 4 (lower is better)
Translates to: GSVFNNLKPQERSAHLLQGSSQI*HSSGYE
Trigger: TTCATATCCAGAGGAATGGCAGATCTGAGACGATCC...CTGTAATAAATGAGCAGACCTCTCCTGTGGTTTCAAATTATTAAACACACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGCTTGTCTTCATTATaGCCTTATCCCTTGACTAGA +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLSLSSL*PYPLTR
Trigger: TCTAGTCAAGGGATAAGGGCATAATGAAGACAAGCT...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATACAAAGTGTCCACTTaGCTCCAGACAATACTGAAT +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLYKVST*LQTILN
Trigger: ATTCAGTATTGTCTGGAGGCAAGTGGACACTTTGTA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp GGAAGTGTGTTTAATAATTTGAAACCACAGGAGAGGTCTGCTCATTTATTACAGTCACAGTGGCCTGAGTaGAATTACCGATATGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSVFNNLKPQERSAHLLQSQWPE*NYRYEK
Trigger: CTTCTCATATCGGTAATTCCACTCAGGCCACTGTGA...CTGTAATAAATGAGCAGACCTCTCCTGTGGTTTCAAATTATTAAACACACTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATTTTTCCACACTATGTaGCAACAGGATTCCCTATTG +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLFFHTM*QQDSLL
Trigger: CAATAGGGAATCCTGTTGCCACATAGTGTGGAAAAA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp GGAAGTGTGTTTAATAATTTGAAACCACAGGAGAGGTCTGCTCATTTATTACAGGACATCGGAGAAACATaGGTGAATGTGATTTCGAAC +
Preference number: 4 (lower is better)
Translates to: GSVFNNLKPQERSAHLLQDIGET*VNVISN
Trigger: GTTCGAAATCACATTCACTCATGTTTCTCCGATGTC...CTGTAATAAATGAGCAGACCTCTCCTGTGGTTTCAAATTATTAAACACACTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAACAAAACCCCTCAAATaGCAATTACAAGAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRTKPLK*QLQELC
Trigger: ACACAACTCTTGTAATTGTCATTTGAGGGGTTTTGT...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp GCTTTCAAGTTAACAGTCAAAGCTTGGTTGGCATCACTGATAAATGCAAGTAAAGTAGAACACTGTGTGTaGTCCACTAATGAAACCAAC +
Preference number: 4 (lower is better)
Translates to: AFKLTVKAWLASLINASKVEHCV*STNETN
Trigger: GTTGGTTTCATTAGTGGATCACACACAGTGTTCTAC...TTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp GCTTTCAAGTTAACAGTCAAAGCTTGGTTGGCATCACTGATAAATGCAAGTAAATCAGAGAAGGCACTATaGCAATGGAGAAAAACAGCT +
Preference number: 4 (lower is better)
Translates to: AFKLTVKAWLASLINASKSEKAL*QWRKTA
Trigger: AGCTGTTTTTCTCCATTGTCATAGTGCCTTCTCTGA...TTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR GCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATGTTTGAATTCACAGTaGTTCTCCTCTAGAATGTCT +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLCLNSQ*FSSRMS
Trigger: AGACATTCTAGAGGAGAAGCACTGTGAATTCAAACA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR GCA 90 bp GCTTTCAAGTTAACAGTCAAAGCTTGGTTGGCATCACTGATAAATGCAAGTAAAGAAAATTTCATCCATTaGCAGACGACCGTATTCTGT +
Preference number: 4 (lower is better)
Translates to: AFKLTVKAWLASLINASKENFIH*QTTVFC
Trigger: ACAGAATACGGTCGTCTGGCAATGGATGAAATTTTC...TTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp GGAAGTGTGTTTAATAATTTGAAACCACAGGAGAGGTCTGCTCATTTATTACAGAAACTGTCAGCCTACTaGGTAAAAACCTCACATTTC +
Preference number: 4 (lower is better)
Translates to: GSVFNNLKPQERSAHLLQKLSAY*VKTSHF
Trigger: GAAATGTGAGGTTTTTACCCAGTAGGCTGACAGTTT...CTGTAATAAATGAGCAGACCTCTCCTGTGGTTTCAAATTATTAAACACACTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CCA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATTAACAGTCAAAGCTTaGTTGGCATCACTGATAAAT +
Preference number: 4 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLLTVKA*LASLIN
Trigger: ATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR TCA 90 bp GCTTTCAAGTTAACAGTCAAAGCTTGGTTGGCATCACTGATAAATGCAAGTAAATCTCTCTGTGGTCTCTaGACCACTATTTATAAAAGT +
Preference number: 4 (lower is better)
Translates to: AFKLTVKAWLASLINASKSLCGL*TTIYKS
Trigger: ACTTTTATAAATAGTGGTTCAGAGACCACAGAGAGA...TTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
3UTR CAA 72 bp ATTTGTGGCTTAATGTTTCACCTGTATGTGAAAGATTaGGGGGTTCAAGTCACAGTGCTGAATTTTACTTTT +
Preference number: 4 (lower is better)
Translates to: ICGLMFHLYVKD*GVQVTVLNFTF
Trigger: AAAAGTAAAATTCAGCACTGTGACTTGAACCCCCAAATCTTTCACATACAGGTGAAACATTAAGCCACAAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS GCA 90 bp CGAGGCGGGGCGGGAAAGCGCACGCGGCAGAATCCCGCCACCGCCTaGCGCGTGTGCGCGAAGCGAGCCGCCGGGTACCTGTTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: RGGAGKRTRQNPATA*RVCAKRAAGYLLAG
Trigger: CCCCGCCAACAGGTACCCGGCGGCTCGCTTCGCGCACACGCGGCAGGCGGTGGCGGGATTCTGCCGCGTGCGCTTTCCCGCCCCGCCTCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS CCA 90 bp TGGGGCACGCGGAGCCGCGACGGAGCGAGCGCAGCGCGGTCTGCGTaGCCCAACGGACAGCCCGAGGCGTGGCGAGCGCAGGACGAGGCT +
Preference number: 5 (lower is better)
Translates to: WGTRSRDGASAARSA*PNGQPEAWRAQDEA
Trigger: AGCCTCGTCCTGCGCTCGCCACGCCTCGGGCTGTCCGTTGGGCCACGCAGACCGCGCTGCGCTCGCTCCGTCGCGGCTCCGCGTGCCCCA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS GCA 90 bp TCCCAGCAGGCTGTGCGGGAAGGGGCGGGCTGGCTCGGGTCCTCCTaGGAGCTGCGGCCGGCGCCTAACGTGCAGACCAGGCCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: SQQAVREGAGWLGSS*ELRPAPNVQTRPQA
Trigger: GGCCTGGGGCCTGGTCTGCACGTTAGGCGCCGGCCGCAGCTCGCAGGAGGACCCGAGCCAGCCCGCCCCTTCCCGCACAGCCTGCTGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538786.1
ENST00000540699.1
CDS GCA 90 bp AAGGTGGGGCACGCGGAGCCGCGACGGAGCGAGCGCAGCGCGGTCTaGGTGGCCCAACGGACAGCCCGAGGCGTGGCGAGCGCAGGACGA +
Preference number: 5 (lower is better)
Translates to: KVGHAEPRRSERSAV*VAQRTARGVASAGR
Trigger: TCGTCCTGCGCTCGCCACGCCTCGGGCTGTCCGTTGGGCCACGCAGACCGCGCTGCGCTCGCTCCGTCGCGGCTCCGCGTGCCCCACCTT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS GCA 90 bp AGGCTGTGCGGGAAGGGGCGGGCTGGCTCGGGTCCTCCTGCGAGCTaGGGCCGGCGCCTAACGTGCAGACCAGGCCCCAGGCCGAGGCTT +
Preference number: 5 (lower is better)
Translates to: RLCGKGRAGSGPPAS*GRRLTCRPGPRPRL
Trigger: AAGCCTCGGCCTGGGGCCTGGTCTGCACGTTAGGCGCCGGCCGCAGCTCGCAGGAGGACCCGAGCCAGCCCGCCCCTTCCCGCACAGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538786.1
ENST00000540699.1
CDS GCA 90 bp CGGGCTGGCTCGGGTCCTCCTGCGAGCTGCGGCCGGCGCCTAACGTaGAGACCAGGCCCCAGGCCGAGGCTTTATCCTGGAACCACCAGT +
Preference number: 5 (lower is better)
Translates to: RAGSGPPASCGRRLT*RPGPRPRLYPGTTS
Trigger: ACTGGTGGTTCCAGGATAAAGCCTCGGCCTGGGGCCTGGTCTGCACGTTAGGCGCCGGCCGCAGCTCGCAGGAGGACCCGAGCCAGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538786.1
ENST00000540699.1
CDS CCA 90 bp CCACCGCCTGCCGCGTGTGCGCGAAGCGAGCCGCCGGGTACCTGTTaGCGGGGCGCTGAGTGCTACCGTCCTTTGGGAATTGTAGTCCCG +
Preference number: 5 (lower is better)
Translates to: PPPAACARSEPPGTC*RGAECYRPLGIVVP
Trigger: CGGGACTACAATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGGTACCCGGCGGCTCGCTTCGCGCACACGCGGCAGGCGGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS TCA 90 bp CGCGTGTGCGCGAAGCGAGCCGCCGGGTACCTGTTGGCGGGGCGCTaGGTGCTACCGTCCTTTGGGAATTGTAGTCCCGCGCTCACTGGG +
Preference number: 5 (lower is better)
Translates to: RVCAKRAAGYLLAGR*VLPSFGNCSPALTG
Trigger: CCCAGTGAGCGCGGGACTACAATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGGTACCCGGCGGCTCGCTTCGCGCACACGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS GCA 90 bp TGTGCGCGAAGCGAGCCGCCGGGTACCTGTTGGCGGGGCGCTGAGTaGTACCGTCCTTTGGGAATTGTAGTCCCGCGCTCACTGGGTCCC +
Preference number: 5 (lower is better)
Translates to: CARSEPPGTCWRGAE*YRPLGIVVPRSLGP
Trigger: GGGACCCAGTGAGCGCGGGACTACAATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGGTACCCGGCGGCTCGCTTCGCGCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS CCA 90 bp CGCTCACTGGGTCCCGGCCAGCGGTCCTCATACTGCGCACTCATCTaGGGCGGGGCTTGGCGTGGTTCTCCGACGACTGAACTACAACTC +
Preference number: 5 (lower is better)
Translates to: RSLGPGQRSSYCALI*GGAWRGSPTTELQL
Trigger: GAGTTGTAGTTCAGTCGTCGGAGAACCACGCCAAGCCCCGCCCCAGATGAGTGCGCAGTATGAGGACCGCTGGCCGGGACCCAGTGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538786.1
ENST00000540699.1
CDS CCA 90 bp CCGGCGCCTAACGTGCAGACCAGGCCCCAGGCCGAGGCTTTATCCTaGAACCACCAGTGTGAGAGACAGCTTTGGTGTTTAACTAGGCCT +
Preference number: 5 (lower is better)
Translates to: PAPNVQTRPQAEALS*NHQCERQLWCLTRP
Trigger: AGGCCTAGTTAAACACCAAAGCTGTCTCTCACACTGGTGGTTCCAGGATAAAGCCTCGGCCTGGGGCCTGGTCTGCACGTTAGGCGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540699.1
CDS-3UTR CAA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCCATCTGGGGCGGGGCTaGGCGTGGTTCTCCGACGAC +
Preference number: 5 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFHLGRG*AWFSDD
Trigger: GTCGTCGGAGAACCACGCCAAGCCCCGCCCCAGATG...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS TCA 90 bp GAACAACTGGGCTACAACCTCAAGACCTATGAAGCCAGTGAGGCCTaGGGCTATGTACAAAGCTACAATGCCCGTGAACAGCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: EQLGYNLKTYEASEA*GYVQSYNAREQHCR
Trigger: CCTGCAGTGCTGTTCACGGGCATTGTAGCTTTGTACATAGCCTCAGGCCTCACTGGCTTCATAGGTCTTGAGGTTGTAGCCCAGTTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS GCA 90 bp CCAGCCACTGAAACCACCACCACATCAAGATCTCGGATGTGGTCCTaGAAGAGGATGCTGGCCAAGGCTTTCTCATCTAGCTCAAAGGAA +
Preference number: 5 (lower is better)
Translates to: PATETTTTSRSRMWS*KRMLAKAFSSSSKE
Trigger: TTCCTTTGAGCTAGATGAGAAAGCCTTGGCCAGCATCCTCTTGCAGGACCACATCCGAGATCTTGATGTGGTGGTGGTTTCAGTGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398868.8
ENST00000535789.1
ENST00000538786.1
ENST00000540699.1
CDS TCA 90 bp AAAATCCAGAATGAAGGACTTGCCCTTTCGGAAGGCACCAGCCACTaGAACCACCACCACATCAAGATCTCGGATGTGGTCCTGCAAGAG +
Preference number: 5 (lower is better)
Translates to: KIQNEGLALSEGTSH*NHHHIKISDVVLQE
Trigger: CTCTTGCAGGACCACATCCGAGATCTTGATGTGGTGGTGGTTTCAGTGGCTGGTGCCTTCCGAAAGGGCAAGTCCTTCATTCTGGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398868.8
ENST00000535789.1
ENST00000538786.1
ENST00000540699.1
CDS CCA 90 bp CCATGGATGGTCTTCCAACAACTGCATCCCTCACAGTGGCCTGAGTaGAATTACCGATATGAGAAGAAGCCTGCTCCAACACATATGCGG +
Preference number: 5 (lower is better)
Translates to: PWMVFQQLHPSQWPE*NYRYEKKPAPTHMR
Trigger: CCGCATATGTGTTGGAGCAGGCTTCTTCTCATATCGGTAATTCCACTCAGGCCACTGTGAGGGATGCAGTTGTTGGAAGACCATCCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCTGCACTGGACCAGGCTaGCTGCTCTCCATGGCATCA +
Preference number: 5 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFCTGPG*LLSMAS
Trigger: TGATGCCATGGAGAGCAGCAAGCCTGGTCCAGTGCA...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCCATCAAAGTCAGGGCTaGTGGCCACCTGGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFHQSQG*WPPGVL
Trigger: CAGGACTCCAGGTGGCCACAAGCCCTGACTTTGATG...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS CCA 90 bp GTGAGGAGTGCTATTAACAGTAGTCCAACCATACAGTTGAACAACTaGGCTACAACCTCAAGACCTATGAAGCCAGTGAGGCCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: VRSAINSSPTIQLNN*ATTSRPMKPVRPEA
Trigger: AGCCTCAGGCCTCACTGGCTTCATAGGTCTTGAGGTTGTAGCCCAGTTGTTCAACTGTATGGTTGGACTACTGTTAATAGCACTCCTCAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTCCAGAATGAAGGACTaGCCCTTTCGGAAGGCACCA +
Preference number: 5 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTSRMKD*PFRKAP
Trigger: TGGTGCCTTCCGAAAGGGCAAGTCCTTCATTCTGGA...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS TCA 90 bp GGCTTGTGGCCACCTGGAGTCCTGGATGTGGTAAGAGAAAGCAGGTaGCATCGGAGAAACATGAGTGAATGTGATTTCGAACATTCTGAA +
Preference number: 5 (lower is better)
Translates to: GLWPPGVLDVVRESR*HRRNMSECDFEHSE
Trigger: TTCAGAATGTTCGAAATCACATTCACTCATGTTTCTCCGATGTCACCTGCTTTCTCTTACCACATCCAGGACTCCAGGTGGCCACAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS GCA 90 bp AAACCACCACCACATCAAGATCTCGGATGTGGTCCTGCAAGAGGATaGTGGCCAAGGCTTTCTCATCTAGCTCAAAGGAATGTTGATCTT +
Preference number: 5 (lower is better)
Translates to: KPPPHQDLGCGPARG*WPRLSHLAQRNVDL
Trigger: AAGATCAACATTCCTTTGAGCTAGATGAGAAAGCCTTGGCCAGCATCCTCTTGCAGGACCACATCCGAGATCTTGATGTGGTGGTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398868.8
ENST00000535789.1
ENST00000538786.1
ENST00000540699.1
CDS GCA 90 bp ACTGCAGGGGTTCGGAAGGTGCTGAAGACGTTCTTGCTACCATTGTaGTTGCAGAAGTTCTCATATAATTCCTTGATTTCCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: TAGVRKVLKTFLLPL*LQKFSYNSLISSSS
Trigger: GCTGGAGGAGGAAATCAAGGAATTATATGAGAACTTCTGCAAGCACAATGGTAGCAAGAACGTCTTCAGCACCTTCCGAACCCCTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATGCACTGGACCAGGCTaGCTGCTCTCCATGGCATCA +
Preference number: 5 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLCTGPG*LLSMAS
Trigger: TGATGCCATGGAGAGCAGCAAGCCTGGTCCAGTGCA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGGTGCTGAAGACGTTCTaGCTACCATTGTGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTVLKTF*LPLCLQ
Trigger: CTGCAAGCACAATGGTAGCAAGAACGTCTTCAGCAC...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAGAGTGCTACCGTCCTTaGGGAATTGTAGTCCCGCGC +
Preference number: 5 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRECYRP*GIVVPR
Trigger: GCGCGGGACTACAATTCCCAAAGGACGGTAGCACTC...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS-3UTR CAA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCAGTCCAACCATACAGTaGAACAACTGGGCTACAACC +
Preference number: 5 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFSPTIQ*NNWATT
Trigger: GGTTGTAGCCCAGTTGTTCAACTGTATGGTTGGACT...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGGCCCAGCTCACGATATaGACCAGAATACCTGATGTA +
Preference number: 5 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTAQLTI*TRIPDV
Trigger: TACATCAGGTATTCTGGTCAATATCGTGAGCTGGGC...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCGCCCAGCTCACGATATaGACCAGAATACCTGATGTA +
Preference number: 5 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFAQLTI*TRIPDV
Trigger: TACATCAGGTATTCTGGTCAATATCGTGAGCTGGGC...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAGGATTCCCAGAGGAGTaGAGACCAGCCTGGTCAACA +
Preference number: 5 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRGFPEE*RPAWST
Trigger: TGTTGACCAGGCTGGTCTCAACTCCTCTGGGAATCC...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CAA 90 bp CATTCCTTTTATTATGAGCCACTCTGGCTTTTCAAGGCACGTTTGCCTCTTTTTGAAAACGCCTGGGGATaGTACTGGCAAGAGACCACC +
Preference number: 5 (lower is better)
Translates to: HSFYYEPLWLFKARLPLFENAWG*YWQETT
Trigger: GGTGGTCTCTTGCCAGTACAATCCCCAGGCGTTTTC...AAAAAGAGGCAAACGTGCCTTGAAAAGCCAGAGTGGCTCATAATAAAAGGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CAA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGAACTTCACTCCAGATTaGAATCCCAGTGGTTTCTGG +
Preference number: 5 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTNFTPD*NPSGFW
Trigger: CCAGAAACCACTGGGATTCAAATCTGGAGTGAAGTT...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGGGAAAATTTCATCCATaGCCAGACGACCGTATTCTG +
Preference number: 5 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTGKFHP*PDDRIL
Trigger: CAGAATACGGTCGTCTGGCAATGGATGAAATTTTCC...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCTTCCCACCCATCTTCTaGGTCTTCTTAAAATGGTCC +
Preference number: 5 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFFPPIF*VFLKWS
Trigger: GGACCATTTTAAGAAGACCAAGAAGATGGGTGGGAA...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTCTTGCTACCATaGTGCTTGCAGAAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFTFLLP*CLQKFS
Trigger: TGAGAACTTCTGCAAGCACAATGGTAGCAAGAACGT...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCCTGTATGTGAAAGATTaGGGGGTTCAAGTCACAGTG +
Preference number: 5 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFLYVKD*GVQVTV
Trigger: CACTGTGACTTGAACCCCCAAATCTTTCACATACAG...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CAA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGACACAGTCTTTCACAGTaGACTGGCTGTCAAATGCCC +
Preference number: 5 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRHSLSQ*TGCQMP
Trigger: GGGCATTTGACAGCCAGTCAACTGTGAAAGACTGTG...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCGCCTGTAACTGCTCTTaGAATTCACCAGCAATATCT +
Preference number: 5 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFACNCS*NSPAIS
Trigger: AGATATTGCTGGTGAATTCAAAGAGCAGTTACAGGC...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCGTGACCTTTGAGCCATaGATCTCCTTTTCCATTAAC +
Preference number: 5 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFVTFEP*ISFSIN
Trigger: GTTAATGGAAAAGGAGATCAATGGCTCAAAGGTCAC...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAGTGCTGAAGACGTTCTaGCTACCATTGTGCTTGCAG +
Preference number: 5 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRVLKTF*LPLCLQ
Trigger: CTGCAAGCACAATGGTAGCAAGAACGTCTTCAGCAC...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGGGGCTTGTTGTGTTCTaGTTTGATCTTCACGTTAAG +
Preference number: 5 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTGLVVF*FDLHVK
Trigger: CTTAACGTGAAGATCAAACAAGAACACAACAAGCCC...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCGAAATCAGTAGGGGCTaGTTGTGTTCTTGTTTGATC +
Preference number: 5 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFEISRG*LCSCLI
Trigger: GATCAAACAAGAACACAACAAGCCCCTACTGATTTC...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp ATTTCTTGGTATACTACGAAAATAAGGCATGACTCAGCTGGGCGGGGTGGCTCAGTTAACAGTCAAAGCTaGGTTGGCATCACTGATAAA +
Preference number: 5 (lower is better)
Translates to: ISWYTTKIRHDSAGRGGSVNSQS*VGITDK
Trigger: TTTATCAGTGATGCCAACCAAGCTTTGACTGTTAAC...TGAGCCACCCCGCCCAGCTGAGTCATGCCTTATTTTCGTAGTATACCAAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CAA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCTCTGGCACACGAAATTaGCCCCAAAGAAAAATGTCT +
Preference number: 5 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFSGTRN*PQRKMS
Trigger: AGACATTTTTCTTTGGGGCAAATTTCGTGTGCCAGA...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS CCA 90 bp CGAAAGCTGAAATCCTTCCCACCCATCTTCTTGGTCTTCTTAAAATaGTCCAGAGCAAGTTGTTTGAATTCACAGTGCTTCTCCTCTAGA +
Preference number: 5 (lower is better)
Translates to: RKLKSFPPIFLVFLK*SRASCLNSQCFSSR
Trigger: TCTAGAGGAGAAGCACTGTGAATTCAAACAACTTGCTCTGGACCATTTTAAGAAGACCAAGAAGATGGGTGGGAAGGATTTCAGCTTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp GCTTTCAAGTTAACAGTCAAAGCTTGGTTGGCATCACTGATAAATGCAAGTAAATCCAGAATGAAGGACTaGCCCTTTCGGAAGGCACCA +
Preference number: 5 (lower is better)
Translates to: AFKLTVKAWLASLINASKSRMKD*PFRKAP
Trigger: TGGTGCCTTCCGAAAGGGCAAGTCCTTCATTCTGGA...TTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CAA 90 bp ACTGTAGTTCTGGCACACGAAATTTGCCCCAAAGAAAAATGTCTTTCAAAGCCCGTACAAAGTGTCCACTaGCCTCCAGACAATACTGAA +
Preference number: 5 (lower is better)
Translates to: TVVLAHEICPKEKCLSKPVQSVH*PPDNTE
Trigger: TTCAGTATTGTCTGGAGGCAAGTGGACACTTTGTAC...GGGCTTTGAAAGACATTTTTCTTTGGGGCAAATTTCGTGTGCCAGAACTACAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CAA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAGGAAAATTTCATCCATaGCCAGACGACCGTATTCTG +
Preference number: 5 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLGKFHP*PDDRIL
Trigger: CAGAATACGGTCGTCTGGCAATGGATGAAATTTTCC...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATTCCCACCCATCTTCTaGGTCTTCTTAAAATGGTCC +
Preference number: 5 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLFPPIF*VFLKWS
Trigger: GGACCATTTTAAGAAGACCAAGAAGATGGGTGGGAA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAACGTTCTTGCTACCATaGTGCTTGCAGAAGTTCTCA +
Preference number: 5 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLTFLLP*CLQKFS
Trigger: TGAGAACTTCTGCAAGCACAATGGTAGCAAGAACGT...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp CGTGGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCTTGTTGTGTTCTTGTTaGATCTTCACGTTAAGATGC +
Preference number: 5 (lower is better)
Translates to: RGRNPEISRGLLCSCLIFLLCSC*IFTLRC
Trigger: GCATCTTAACGTGAAGATCAAACAAGAACACAACAA...GAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCCACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp GGCAGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGAGTATTTTTGTGTGTTaGACCAAAGCGCTTTACTTC +
Preference number: 5 (lower is better)
Translates to: GRNPEISRGLLCSCLIFTSIFVC*TKALYF
Trigger: GAAGTAAAGCGCTTTGGTCAAACACACAAAAATACT...CGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CAA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAGCCTGTAACTGCTCTTaGAATTCACCAGCAATATCT +
Preference number: 5 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRACNCS*NSPAIS
Trigger: AGATATTGCTGGTGAATTCAAAGAGCAGTTACAGGC...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGATTCTCATATAATTCCTaGATTTCCTCCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRFSYNS*ISSSSS
Trigger: GGAGCTGGAGGAGGAAATCAAGGAATTATATGAGAA...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATTCTCATATAATTCCTaGATTTCCTCCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLFSYNS*ISSSSS
Trigger: GGAGCTGGAGGAGGAAATCAAGGAATTATATGAGAA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAATCAGTAGGGGCTTGTaGTGTTCTTGTTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRISRGL*CSCLIF
Trigger: GAAGATCAAACAAGAACACAACAAGCCCCTACTGAT...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAGAAATCAGTAGGGGCTaGTTGTGTTCTTGTTTGATC +
Preference number: 5 (lower is better)
Translates to: NPEISRGLLCSCLIFTLREISRG*LCSCLI
Trigger: GATCAAACAAGAACACAACAAGCCCCTACTGATTTC...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGATATTTGGGTAGGACTTaGATCCTTGCTAAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRYLGRT*ILAKAK
Trigger: CTTTGCCTTAGCAAGGATCAAAGTCCTACCCAAATA...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CAA 90 bp ACTGTAGTTCTGGCACACGAAATTTGCCCCAAAGAAAAATGTCTTTCAAAGCCCTTGCTACCATTGTGCTaGCAGAAGTTCTCATATAAT +
Preference number: 5 (lower is better)
Translates to: TVVLAHEICPKEKCLSKPLLPLC*QKFSYN
Trigger: ATTATATGAGAACTTCTGCAAGCACAATGGTAGCAA...GGGCTTTGAAAGACATTTTTCTTTGGGGCAAATTTCGTGTGCCAGAACTACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CAA 90 bp AACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGAAGCCATGTTGACAACTaGAGATGGAAGATCAAATCA +
Preference number: 5 (lower is better)
Translates to: NPEISRGLLCSCLIFTLRSHVDN*RWKIKS
Trigger: TGATTTGATCTTCCATCTCAAGTTGTCAACATGGCT...TCTTAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CAA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTACCAGACAATACTGAATaGTACTTTCTCCTTGGTACT +
Preference number: 5 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLPDNTE*YFLLGT
Trigger: AGTACCAAGGAGAAAGTACAATTCAGTATTGTCTGG...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CAA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATTGCTACCATTGTGCTaGCAGAAGTTCTCATATAAT +
Preference number: 5 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLLLPLC*QKFSYN
Trigger: ATTATATGAGAACTTCTGCAAGCACAATGGTAGCAA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTATTGTTGTGTTCTTGTTaGATCTTCACGTTAAGATGC +
Preference number: 5 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLLLCSC*IFTLRC
Trigger: GCATCTTAACGTGAAGATCAAACAAGAACACAACAA...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS-3UTR CAA 90 bp GCTTTCAAGTTAACAGTCAAAGCTTGGTTGGCATCACTGATAAATGCAAGTAAAGGGCTTGTTGTGTTCTaGTTTGATCTTCACGTTAAG +
Preference number: 5 (lower is better)
Translates to: AFKLTVKAWLASLINASKGLVVF*FDLHVK
Trigger: CTTAACGTGAAGATCAAACAAGAACACAACAAGCCC...TTTACTTGCATTTATCAGTGATGCCAACCAAGCTTTGACTGTTAACTTGAAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CAA 90 bp AGAAACCCAGAAATCAGTAGGGGCTTGTTGTGTTCTTGTTTGATCTTCACGTTAAGTGTGTTTAATAATTaGAAACCACAGGAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: RNPEISRGLLCSCLIFTLSVFNN*KPQERS
Trigger: AGACCTCTCCTGTGGTTTCAAATTATTAAACACACT...TAACGTGAAGATCAAACAAGAACACAACAAGCCCCTACTGATTTCTGGGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS-3UTR CAA 90 bp GGAAGTGTGTTTAATAATTTGAAACCACAGGAGAGGTCTGCTCATTTATTACAGCTTTTCAAGGCACGTTaGCCTCTTTTTCTAGAAAGA +
Preference number: 5 (lower is better)
Translates to: GSVFNNLKPQERSAHLLQLFKAR*PLFLER
Trigger: TCTTTCTAGAAAAAGAGGCAAACGTGCCTTGAAAAG...CTGTAATAAATGAGCAGACCTCTCCTGTGGTTTCAAATTATTAAACACACTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398868.8
CDS GCA 72 bp GGGAAGGGGCGGGCTGGCTCGGGTCCTCCTGCGAGCTaGGGCCGGCGCCTAACGTGCAGACCAGGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: GKGRAGSGPPAS*GRRLTCRPGPR
Trigger: CCTGGGGCCTGGTCTGCACGTTAGGCGCCGGCCGCAGCTCGCAGGAGGACCCGAGCCAGCCCGCCCCTTCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538786.1
ENST00000540699.1
CDS GCA 72 bp CGCACGCGGCAGAATCCCGCCACCGCCTGCCGCGTGTaGGCGAAGCGAGCCGCCGGGTACCTGTTGGCGGGG +
Preference number: 6 (lower is better)
Translates to: RTRQNPATACRV*AKRAAGYLLAG
Trigger: CCCCGCCAACAGGTACCCGGCGGCTCGCTTCGCGCACACGCGGCAGGCGGTGGCGGGATTCTGCCGCGTGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS GCA 72 bp GCGGGAAAGCGCACGCGGCAGAATCCCGCCACCGCCTaGCGCGTGTGCGCGAAGCGAGCCGCCGGGTACCTG +
Preference number: 6 (lower is better)
Translates to: AGKRTRQNPATA*RVCAKRAAGYL
Trigger: CAGGTACCCGGCGGCTCGCTTCGCGCACACGCGGCAGGCGGTGGCGGGATTCTGCCGCGTGCGCTTTCCCGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS CCA 72 bp TACAACTCCCAGCAGGCTGTGCGGGAAGGGGCGGGCTaGCTCGGGTCCTCCTGCGAGCTGCGGCCGGCGCCT +
Preference number: 6 (lower is better)
Translates to: YNSQQAVREGAG*LGSSCELRPAP
Trigger: AGGCGCCGGCCGCAGCTCGCAGGAGGACCCGAGCCAGCCCGCCCCTTCCCGCACAGCCTGCTGGGAGTTGTA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538786.1
ENST00000540699.1
CDS CCA 72 bp GAGAGGGACGGGTGCGGGCGGGAACGAACCGGGCCCTaGAAGCGGGAAACGGGCGGAGCCTGGGCTCTAGAA +
Preference number: 6 (lower is better)
Translates to: ERDGCGRERTGP*KRETGGAWALE
Trigger: TTCTAGAGCCCAGGCTCCGCCCGTTTCCCGCTTCCAGGGCCCGGTTCGTTCCCGCCCGCACCCGTCCCTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS CAA 90 bp GAGCCGCCGGGTACCTGTTGGCGGGGCGCTGAGTGCTACCGTCCTTaGGGAATTGTAGTCCCGCGCTCACTGGGTCCCGGCCAGCGGTCC +
Preference number: 6 (lower is better)
Translates to: EPPGTCWRGAECYRP*GIVVPRSLGPGQRS
Trigger: GGACCGCTGGCCGGGACCCAGTGAGCGCGGGACTACAATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGGTACCCGGCGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS GCA 72 bp TCGGGTCCTCCTGCGAGCTGCGGCCGGCGCCTAACGTaGAGACCAGGCCCCAGGCCGAGGCTTTATCCTGGA +
Preference number: 6 (lower is better)
Translates to: SGPPASCGRRLT*RPGPRPRLYPG
Trigger: TCCAGGATAAAGCCTCGGCCTGGGGCCTGGTCTGCACGTTAGGCGCCGGCCGCAGCTCGCAGGAGGACCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538786.1
ENST00000540699.1
CDS CAA 90 bp GAACGAACCGGGCCCTGTTGGCGGGGCGCTGAGTGCTACCGTCCTTaGGGAATTGTAGTCCCGCGCTCACTGGGTCCCGGCCAGCGGTCC +
Preference number: 6 (lower is better)
Translates to: ERTGPCWRGAECYRP*GIVVPRSLGPGQRS
Trigger: GGACCGCTGGCCGGGACCCAGTGAGCGCGGGACTACAATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGGGCCCGGTTCGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540699.1
CDS CCA 72 bp GCCGCGTGTGCGCGAAGCGAGCCGCCGGGTACCTGTTaGCGGGGCGCTGAGTGCTACCGTCCTTTGGGAATT +
Preference number: 6 (lower is better)
Translates to: AACARSEPPGTC*RGAECYRPLGI
Trigger: AATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGGTACCCGGCGGCTCGCTTCGCGCACACGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS CAA 72 bp GGGCCCTGTTGGCGGGGCGCTGAGTGCTACCGTCCTTaGGGAATTGTAGTCCCGCGCTCACTGGGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: GPCWRGAECYRP*GIVVPRSLGPG
Trigger: GCCGGGACCCAGTGAGCGCGGGACTACAATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000540699.1
CDS TCA 72 bp GCGAAGCGAGCCGCCGGGTACCTGTTGGCGGGGCGCTaGGTGCTACCGTCCTTTGGGAATTGTAGTCCCGCG +
Preference number: 6 (lower is better)
Translates to: AKRAAGYLLAGR*VLPSFGNCSPA
Trigger: CGCGGGACTACAATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGGTACCCGGCGGCTCGCTTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS CCA 72 bp GGTCCCGGCCAGCGGTCCTCATACTGCGCACTCATCTaGGGCGGGGCTTGGCGTGGTTCTCCGACGACTGAA +
Preference number: 6 (lower is better)
Translates to: GPGQRSSYCALI*GGAWRGSPTTE
Trigger: TTCAGTCGTCGGAGAACCACGCCAAGCCCCGCCCCAGATGAGTGCGCAGTATGAGGACCGCTGGCCGGGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538786.1
ENST00000540699.1
CDS GCA 72 bp AGCGAGCCGCCGGGTACCTGTTGGCGGGGCGCTGAGTaGTACCGTCCTTTGGGAATTGTAGTCCCGCGCTCA +
Preference number: 6 (lower is better)
Translates to: SEPPGTCWRGAE*YRPLGIVVPRS
Trigger: TGAGCGCGGGACTACAATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGGTACCCGGCGGCTCGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS CAA 72 bp GGTACCTGTTGGCGGGGCGCTGAGTGCTACCGTCCTTaGGGAATTGTAGTCCCGCGCTCACTGGGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: GTCWRGAECYRP*GIVVPRSLGPG
Trigger: GCCGGGACCCAGTGAGCGCGGGACTACAATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGGTACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS CAA 90 bp CTCCATGGCATCATCTGTTGGCGGGGCGCTGAGTGCTACCGTCCTTaGGGAATTGTAGTCCCGCGCTCACTGGGTCCCGGCCAGCGGTCC +
Preference number: 6 (lower is better)
Translates to: LHGIICWRGAECYRP*GIVVPRSLGPGQRS
Trigger: GGACCGCTGGCCGGGACCCAGTGAGCGCGGGACTACAATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGATGATGCCATGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS CAA 72 bp ATCATCTGTTGGCGGGGCGCTGAGTGCTACCGTCCTTaGGGAATTGTAGTCCCGCGCTCACTGGGTCCCGGC +
Preference number: 6 (lower is better)
Translates to: IICWRGAECYRP*GIVVPRSLGPG
Trigger: GCCGGGACCCAGTGAGCGCGGGACTACAATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS CCA 72 bp CGGTCCTCATACTGCGCACTCATCTGGGGCGGGGCTTaGCGTGGTTCTCCGACGACTGAACTACAACTCCCA +
Preference number: 6 (lower is better)
Translates to: RSSYCALIWGGA*RGSPTTELQLP
Trigger: TGGGAGTTGTAGTTCAGTCGTCGGAGAACCACGCCAAGCCCCGCCCCAGATGAGTGCGCAGTATGAGGACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538786.1
ENST00000540699.1
CDS TCA 72 bp TGCTGCTCTCCATGGCATCATCTGTTGGCGGGGCGCTaGGTGCTACCGTCCTTTGGGAATTGTAGTCCCGCG +
Preference number: 6 (lower is better)
Translates to: CCSPWHHLLAGR*VLPSFGNCSPA
Trigger: CGCGGGACTACAATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGATGATGCCATGGAGAGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS GCA 72 bp GCTCTCCATGGCATCATCTGTTGGCGGGGCGCTGAGTaGTACCGTCCTTTGGGAATTGTAGTCCCGCGCTCA +
Preference number: 6 (lower is better)
Translates to: ALHGIICWRGAE*YRPLGIVVPRS
Trigger: TGAGCGCGGGACTACAATTCCCAAAGGACGGTAGCACTCAGCGCCCCGCCAACAGATGATGCCATGGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS GCA 72 bp CTTTCTGAACCAAAACAACCTGCACTGGACCAGGCTTaGTGCTCTCCATGGCATCATCTGTTGGCGGGGCGC +
Preference number: 6 (lower is better)
Translates to: LSEPKQPALDQA*CSPWHHLLAGR
Trigger: GCGCCCCGCCAACAGATGATGCCATGGAGAGCAGCAAGCCTGGTCCAGTGCAGGTTGTTTTGGTTCAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS GCA 72 bp CTTTCTGAACCAAAACAACCTGCACTGGACCAGGCTTaGTGCTCTCCATGGCATCATCTGCTCCTCTTGAGG +
Preference number: 6 (lower is better)
Translates to: LSEPKQPALDQA*CSPWHHLLLLR
Trigger: CCTCAAGAGGAGCAGATGATGCCATGGAGAGCAGCAAGCCTGGTCCAGTGCAGGTTGTTTTGGTTCAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000540699.1
CDS GCA 72 bp GAAACCACCACCACATCAAGATCTCGGATGTGGTCCTaGAAGAGGATGCTGGCCAAGGCTTTCTCATCTAGC +
Preference number: 6 (lower is better)
Translates to: ETTTTSRSRMWS*KRMLAKAFSSS
Trigger: GCTAGATGAGAAAGCCTTGGCCAGCATCCTCTTGCAGGACCACATCCGAGATCTTGATGTGGTGGTGGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398868.8
ENST00000535789.1
ENST00000538786.1
ENST00000540699.1
CDS GCA 72 bp GGCTATGTACAAAGCTACAATGCCCGTGAACAGCACTaGAGGGGTTCGGAAGGTGCTGAAGACGTTCTTGCT +
Preference number: 6 (lower is better)
Translates to: GYVQSYNAREQH*RGSEGAEDVLA
Trigger: AGCAAGAACGTCTTCAGCACCTTCCGAACCCCTGCAGTGCTGTTCACGGGCATTGTAGCTTTGTACATAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS TCA 72 bp CCTGGCTTCTCCACAGTGAAAACTTCACTCCAGATTTaGATCCCAGTGGTTTCTGGATCAGATCCCCCTCTC +
Preference number: 6 (lower is better)
Translates to: PGFSTVKTSLQI*IPVVSGSDPPL
Trigger: GAGAGGGGGATCTGATCCAGAAACCACTGGGATTCAAATCTGGAGTGAAGTTTTCACTGTGGAGAAGCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS GCA 72 bp CCACATCAAGATCTCGGATGTGGTCCTGCAAGAGGATaGTGGCCAAGGCTTTCTCATCTAGCTCAAAGGAAT +
Preference number: 6 (lower is better)
Translates to: PHQDLGCGPARG*WPRLSHLAQRN
Trigger: ATTCCTTTGAGCTAGATGAGAAAGCCTTGGCCAGCATCCTCTTGCAGGACCACATCCGAGATCTTGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398868.8
ENST00000535789.1
ENST00000538786.1
ENST00000540699.1
CDS CCA 72 bp GGAATGTTGATCTTTCTGAACCAAAACAACCTGCACTaGACCAGGCTTGCTGCTCTCCATGGCATCATCTGC +
Preference number: 6 (lower is better)
Translates to: GMLIFLNQNNLH*TRLAALHGIIC
Trigger: GCAGATGATGCCATGGAGAGCAGCAAGCCTGGTCCAGTGCAGGTTGTTTTGGTTCAGAAAGATCAACATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000540699.1
CDS CCA 72 bp GTCTTCCAACAACTGCATCCCTCACAGTGGCCTGAGTaGAATTACCGATATGAGAAGAAGCCTGCTCCAACA +
Preference number: 6 (lower is better)
Translates to: VFQQLHPSQWPE*NYRYEKKPAPT
Trigger: TGTTGGAGCAGGCTTCTTCTCATATCGGTAATTCCACTCAGGCCACTGTGAGGGATGCAGTTGTTGGAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS CCA 72 bp CCATGGATGGTCTTCCAACAACTGCATCCCTCACAGTaGCCTGAGTGGAATTACCGATATGAGAAGAAGCCT +
Preference number: 6 (lower is better)
Translates to: PWMVFQQLHPSQ*PEWNYRYEKKP
Trigger: AGGCTTCTTCTCATATCGGTAATTCCACTCAGGCCACTGTGAGGGATGCAGTTGTTGGAAGACCATCCATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS CAA 90 bp GCAGGGGTTCGGAAGGTGCTGAAGACGTTCTTGCTACCATTGTGCTaGCAGAAGTTCTCATATAATTCCTTGATTTCCTCCTCCAGCTCC +
Preference number: 6 (lower is better)
Translates to: AGVRKVLKTFLLPLC*QKFSYNSLISSSSS
Trigger: GGAGCTGGAGGAGGAAATCAAGGAATTATATGAGAACTTCTGCAAGCACAATGGTAGCAAGAACGTCTTCAGCACCTTCCGAACCCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS CCA 72 bp CATCAAGATCTCGGATGTGGTCCTGCAAGAGGATGCTaGCCAAGGCTTTCTCATCTAGCTCAAAGGAATGTT +
Preference number: 6 (lower is better)
Translates to: HQDLGCGPARGC*PRLSHLAQRNV
Trigger: AACATTCCTTTGAGCTAGATGAGAAAGCCTTGGCCAGCATCCTCTTGCAGGACCACATCCGAGATCTTGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398868.8
ENST00000535789.1
ENST00000538786.1
ENST00000540699.1
CDS CCA 72 bp TTTAATTTCCCATCAAAGTCAGGGCTTGTGGCCACCTaGAGTCCTGGATGTGGTAAGAGAAAGCAGGTGACA +
Preference number: 6 (lower is better)
Translates to: FNFPSKSGLVAT*SPGCGKRKQVT
Trigger: TGTCACCTGCTTTCTCTTACCACATCCAGGACTCCAGGTGGCCACAAGCCCTGACTTTGATGGGAAATTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS CCA 72 bp GGAATGTTGATCTTTCTGAACCAAAACAACCTGCACTaGACCAGGCTTGCTGCTCTCCATGGCATCATCTGT +
Preference number: 6 (lower is better)
Translates to: GMLIFLNQNNLH*TRLAALHGIIC
Trigger: ACAGATGATGCCATGGAGAGCAGCAAGCCTGGTCCAGTGCAGGTTGTTTTGGTTCAGAAAGATCAACATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538786.1
CDS CAA 72 bp ACCTGGCTTCTCCACAGTGAAAACTTCACTCCAGATTaGAATCCCAGTGGTTTCTGGATCAGATCCCCCTCT +
Preference number: 6 (lower is better)
Translates to: TWLLHSENFTPD*NPSGFWIRSPS
Trigger: AGAGGGGGATCTGATCCAGAAACCACTGGGATTCAAATCTGGAGTGAAGTTTTCACTGTGGAGAAGCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS TCA 72 bp CCACCTGGAGTCCTGGATGTGGTAAGAGAAAGCAGGTaGCATCGGAGAAACATGAGTGAATGTGATTTCGAA +
Preference number: 6 (lower is better)
Translates to: PPGVLDVVRESR*HRRNMSECDFE
Trigger: TTCGAAATCACATTCACTCATGTTTCTCCGATGTCACCTGCTTTCTCTTACCACATCCAGGACTCCAGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS GCA 72 bp CTTTCTGAACCAAAACAACCTGCACTGGACCAGGCTTaGTGCTCTCCATGGCATCATATTTTTGGTCCGTTA +
Preference number: 6 (lower is better)
Translates to: LSEPKQPALDQA*CSPWHHIFGPL
Trigger: TAACGGACCAAAAATATGATGCCATGGAGAGCAGCAAGCCTGGTCCAGTGCAGGTTGTTTTGGTTCAGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS CCA 72 bp GGAATGTTGATCTTTCTGAACCAAAACAACCTGCACTaGACCAGGCTTGCTGCTCTCCATGGCATCATATTT +
Preference number: 6 (lower is better)
Translates to: GMLIFLNQNNLH*TRLAALHGIIF
Trigger: AAATATGATGCCATGGAGAGCAGCAAGCCTGGTCCAGTGCAGGTTGTTTTGGTTCAGAAAGATCAACATTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535789.1
CDS CAA 72 bp CAGCAATATCTTTTAATTTCCCATCAAAGTCAGGGCTaGTGGCCACCTGGAGTCCTGGATGTGGTAAGAGAA +
Preference number: 6 (lower is better)
Translates to: QQYLLISHQSQG*WPPGVLDVVRE
Trigger: TTCTCTTACCACATCCAGGACTCCAGGTGGCCACAAGCCCTGACTTTGATGGGAAATTAAAAGATATTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS CAA 72 bp GTGAGGAGTGCTATTAACAGTAGTCCAACCATACAGTaGAACAACTGGGCTACAACCTCAAGACCTATGAAG +
Preference number: 6 (lower is better)
Translates to: VRSAINSSPTIQ*NNWATTSRPMK
Trigger: CTTCATAGGTCTTGAGGTTGTAGCCCAGTTGTTCAACTGTATGGTTGGACTACTGTTAATAGCACTCCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS CAA 72 bp TACTCCAGTAGTCCCCGACAGGTGACCTTTGAGCCATaGATCTCCTTTTCCATTAACTTAGATGGGTTTAAT +
Preference number: 6 (lower is better)
Translates to: YSSSPRQVTFEP*ISFSINLDGFN
Trigger: ATTAAACCCATCTAAGTTAATGGAAAAGGAGATCAATGGCTCAAAGGTCACCTGTCGGGGACTACTGGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS CAA 72 bp ATCCTGTTAACGGTTCTTCTGGGTCACCCAACCAATTaGAATGGCCACTTTCCTTCTGAGAATATAAGTATC +
Preference number: 6 (lower is better)
Translates to: ILLTVLLGHPTN*NGHFPSENISI
Trigger: GATACTTATATTCTCAGAAGGAAAGTGGCCATTCAAATTGGTTGGGTGACCCAGAAGAACCGTTAACAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398868.8
ENST00000538786.1
ENST00000540699.1
CDS GCA 72 bp GATGGGTTTAATACATACGGTATCAGTGCCTGTAACTaGTCTTTGAATTCACCAGCAATATCTTTTAATTTC +
Preference number: 6 (lower is better)
Translates to: DGFNTYGISACN*SLNSPAISFNF
Trigger: GAAATTAAAAGATATTGCTGGTGAATTCAAAGAGCAGTTACAGGCACTGATACCGTATGTATTAAACCCATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS TCA 72 bp TTAATACATACGGTATCAGTGCCTGTAACTGCTCTTTaGATTCACCAGCAATATCTTTTAATTTCCCATCAA +
Preference number: 6 (lower is better)
Translates to: LIHTVSVPVTAL*IHQQYLLISHQ
Trigger: TTGATGGGAAATTAAAAGATATTGCTGGTGAATTCAAAGAGCAGTTACAGGCACTGATACCGTATGTATTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1
CDS CAA 72 bp TTTAATACATACGGTATCAGTGCCTGTAACTGCTCTTaGAATTCACCAGCAATATCTTTTAATTTCCCATCA +
Preference number: 6 (lower is better)
Translates to: FNTYGISACNCS*NSPAISFNFPS
Trigger: TGATGGGAAATTAAAAGATATTGCTGGTGAATTCAAAGAGCAGTTACAGGCACTGATACCGTATGTATTAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398868.8
ENST00000538786.1