RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATG9B (Homo sapiens)

Ensembl gene IDs: ENSG00000181652

Ensembl transcript IDs: ENST00000404733.2, ENST00000466157.2, ENST00000469530.4, ENST00000471797.1, ENST00000473134.5, ENST00000473409.5, ENST00000476282.1, ENST00000605952.5, ENST00000611177.1, ENST00000617967.4, ENST00000639579.1

Found 657 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGGGCGACATaGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTT +
Preference number: 1 (lower is better)
Translates to: TSCRPCSASWRRRAT*SWTRPATSSACQSF
Trigger: AAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 90 bp CGACGTCATCGGCGTGCCAGAGCTTTTCCTTGCAGGAGCGTCAGTTaGGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACA +
Preference number: 1 (lower is better)
Translates to: RRHRRARAFPCRSVS*GAQCPGRSTLPAQT
Trigger: TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGCACGCCGATGACGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 90 bp GTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTaGCTTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGT +
Preference number: 1 (lower is better)
Translates to: VRPSRLRHQQPLRAA*LSLPVPGERLPDSG
Trigger: ACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 90 bp TGCAGACCGTGCAGCGCATCCTGGCGACGGAGGGCGACATGGAGCTaGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCTTG +
Preference number: 1 (lower is better)
Translates to: CRPCSASWRRRATWS*TRPATSSACQSFSL
Trigger: CAAGGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGGTCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 90 bp TCGGCTGCCGATGCTCCCAACTTGACCATCTCTACCGCGACGAGGTaGAGAACGCCCAGCAGCGCGGGGTGTTTGGCCGAGTCCTCACCG +
Preference number: 1 (lower is better)
Translates to: SAADAPNLTISTATR*RTPSSAGCLAESSP
Trigger: CGGTGAGGACTCGGCCAAACACCCCGCGCTGCTGGGCGTTCTGCACCTCGTCGCGGTAGAGATGGTCAAGTTGGGAGCATCGGCAGCCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR TCA 90 bp CGACTCAGGTCCGCCCGACCAGGATCAGCCCCGCTCCTCCCCTCTTaGGGTGGTGCCTTCTCACATCTGTCCAGAGGACGCCACTTGACC +
Preference number: 1 (lower is better)
Translates to: RLRSARPGSAPLLPS*GGAFSHLSRGRHLT
Trigger: GGTCAAGTGGCGTCCTCTGGACAGATGTGAGAAGGCACCACCTCAAGAGGGGAGGAGCGGGGCTGATCCTGGTCGGGCGGACCTGAGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTaGCTCGAGCGGGGCCACATGTTTGTCTGCGGCGATGTTACCATG +
Preference number: 1 (lower is better)
Translates to: DILRTELAAEVHRVL*LERGHMFVCGDVTM
Trigger: CATGGTAACATCGCCGCAGACAAACATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 90 bp CAGGTCCGCCCGACCAGGATCAGCCCCGCTCCTCCCCTCTTGAGGTaGTGCCTTCTCACATCTGTCCAGAGGACGCCACTTGACCCTGCA +
Preference number: 1 (lower is better)
Translates to: QVRPTRISPAPPLLR*CLLTSVQRTPLDPA
Trigger: TGCAGGGTCAAGTGGCGTCCTCTGGACAGATGTGAGAAGGCACCACCTCAAGAGGGGAGGAGCGGGGCTGATCCTGGTCGGGCGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTaGCGACGGAGGGCGACATGGAGCTGGACGAGGCCGGCGACGTCA +
Preference number: 1 (lower is better)
Translates to: MLPWQPTSCRPCSAS*RRRATWSWTRPATS
Trigger: TGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR TCA 90 bp GCCCACTCCCATGACTTTGGTGTTCGGCTGCCGATGCTCCCAACTTaGCCATCTCTACCGCGACGAGGTGCAGAACGCCCAGCAGCGCGG +
Preference number: 1 (lower is better)
Translates to: AHSHDFGVRLPMLPT*PSLPRRGAERPAAR
Trigger: CCGCGCTGCTGGGCGTTCTGCACCTCGTCGCGGTAGAGATGGTCAAGTTGGGAGCATCGGCAGCCGAACACCAAAGTCATGGGAGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 90 bp TTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTaGAGCGCATCCTGGCGACGGAGGGCGACATGGAGCTGGACGAGG +
Preference number: 1 (lower is better)
Translates to: LSAAMLPWQPTSCRP*SASWRRRATWSWTR
Trigger: CCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 90 bp GAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATGTTTGTCTaGGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAG +
Preference number: 1 (lower is better)
Translates to: EVHRVLCLERGHMFV*GDVTMATNVLQTVQ
Trigger: CTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAACATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 90 bp TGTGCCTCGAGCGGGGCCACATGTTTGTCTGCGGCGATGTTACCATaGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGG +
Preference number: 1 (lower is better)
Translates to: CASSGATCLSAAMLP*QPTSCRPCSASWRR
Trigger: CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAACATGTGGCCCCGCTCGAGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 90 bp GCCACATGTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTaGAGACCGTGCAGCGCATCCTGGCGACGGAGGGCGACATGGAGC +
Preference number: 1 (lower is better)
Translates to: ATCLSAAMLPWQPTS*RPCSASWRRRATWS
Trigger: GCTCCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAACATGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 90 bp GCAGGGCTGCAGCCCACTCCCATGACTTTGGTGTTCGGCTGCCGATaGTCCCAACTTGACCATCTCTACCGCGACGAGGTGCAGAACGCC +
Preference number: 1 (lower is better)
Translates to: AGLQPTPMTLVFGCR*SQLDHLYRDEVQNA
Trigger: GGCGTTCTGCACCTCGTCGCGGTAGAGATGGTCAAGTTGGGAGCATCGGCAGCCGAACACCAAAGTCATGGGAGTGGGCTGCAGCCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR TCA 90 bp CCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTGCAGCCCACTCCCATaGCTTTGGTGTTCGGCTGCCGATGCTCCCAACTTGACCATCTCT +
Preference number: 1 (lower is better)
Translates to: PSQARGCLQGCSPLP*LWCSAADAPNLTIS
Trigger: AGAGATGGTCAAGTTGGGAGCATCGGCAGCCGAACACCAAAGTCATGGGAGTGGGCTGCAGCCCTGCAAGCAACCCCGCGCTTGGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 90 bp GCTGGCAGCCGCCAGCATGACGAATCCACAGCCTTAAAGCCCACCTaGCTCACTGTCGCCCTTCCATTTAGCTCGGCCTCATCCTTGACC +
Preference number: 1 (lower is better)
Translates to: AGSRQHDESTALKPT*LTVALPFSSASSLT
Trigger: GGTCAAGGATGAGGCCGAGCTAAATGGAAGGGCGACAGTGAGGCAGGTGGGCTTTAAGGCTGTGGATTCGTCATGCTGGCGGCTGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR GCA 90 bp TTGCTTGCAGGGCTGCAGCCCACTCCCATGACTTTGGTGTTCGGCTaGCGATGCTCCCAACTTGACCATCTCTACCGCGACGAGGTGCAG +
Preference number: 1 (lower is better)
Translates to: LLAGLQPTPMTLVFG*RCSQLDHLYRDEVQ
Trigger: CTGCACCTCGTCGCGGTAGAGATGGTCAAGTTGGGAGCATCGGCAGCCGAACACCAAAGTCATGGGAGTGGGCTGCAGCCCTGCAAGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR TCA 90 bp GGAGACGGCTCTTGGCAAGCAGTCCAGGGGTCTAGATTCCAGAGATaGCCACCTCCCATCACCCCAAATTCCCACCACTGCTCCCATCGC +
Preference number: 1 (lower is better)
Translates to: GDGSWQAVQGSRFQR*PPPITPNSHHCSHR
Trigger: GCGATGGGAGCAGTGGTGGGAATTTGGGGTGATGGGAGGTGGTCATCTCTGGAATCTAGACCCCTGGACTGCTTGCCAAGAGCCGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR CCA 90 bp TGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATaGAATTCTGAGTCCGAAGCCGCGCATTCTAGCGCAGCTCCACCA +
Preference number: 1 (lower is better)
Translates to: WERGRGLRCHTMQRA*NSESEAAHSSAAPP
Trigger: TGGTGGAGCTGCGCTAGAATGCGCGGCTTCGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR TCA 90 bp CCACCTGCCTCACTGTCGCCCTTCCATTTAGCTCGGCCTCATCCTTaGCCTCTGTCCCCCACCTTGAGGAAACTCGAGGACTTCTTCCCA +
Preference number: 1 (lower is better)
Translates to: PPASLSPFHLARPHP*PLSPTLRKLEDFFP
Trigger: TGGGAAGAAGTCCTCGAGTTTCCTCAAGGTGGGGGACAGAGGTCAAGGATGAGGCCGAGCTAAATGGAAGGGCGACAGTGAGGCAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR TCA 90 bp TGCCTTCTCACATCTGTCCAGAGGACGCCACTTGACCCTGCACTCTaGAAACATGGTTTCCAGCCAGTCTGGGCTGCTCCCCCGTGCAGT +
Preference number: 1 (lower is better)
Translates to: CLLTSVQRTPLDPAL*KHGFQPVWAAPPCS
Trigger: ACTGCACGGGGGAGCAGCCCAGACTGGCTGGAAACCATGTTTTCAGAGTGCAGGGTCAAGTGGCGTCCTCTGGACAGATGTGAGAAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 90 bp ATGACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCTGTGGCTaGCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTGGCAAGC +
Preference number: 1 (lower is better)
Translates to: MTPCVFLLHPPISCG*RSQGTCGRRRLLAS
Trigger: GCTTGCCAAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR CCA 90 bp AACAATGACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCTGTaGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTGGC +
Preference number: 1 (lower is better)
Translates to: NNDSLCFSTPPSNLL*LPKPGYLWEETALG
Trigger: GCCAAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCATTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR CCA 90 bp GCTCCAGGACACATTCCAGTTGGGGATGTCTCCCCTTATTCCCTCTaGGTGCAGACCATCTCTAAGACTTGTTTCCAGATGCCATCAGCA +
Preference number: 1 (lower is better)
Translates to: APGHIPVGDVSPYSL*VQTISKTCFQMPSA
Trigger: TGCTGATGGCATCTGGAAACAAGTCTTAGAGATGGTCTGCACCCAGAGGGAATAAGGGGAGACATCCCCAACTGGAATGTGTCCTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR TCA 90 bp ACCGAGGTCTGTCCAAGACCTAAGGATGCTACAAGGTGTTCATATTaGGCATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGG +
Preference number: 1 (lower is better)
Translates to: TEVCPRPKDATRCSY*AWGAQGGLSIKRRG
Trigger: CCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCATGCTCAATATGAACACCTTGTAGCATCCTTAGGTCTTGGACAGACCTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 90 bp CAGGACACATTCCAGTTGGGGATGTCTCCCCTTATTCCCTCTGGGTaGAGACCATCTCTAAGACTTGTTTCCAGATGCCATCAGCATCTC +
Preference number: 1 (lower is better)
Translates to: QDTFQLGMSPLIPSG*RPSLRLVSRCHQHL
Trigger: GAGATGCTGATGGCATCTGGAAACAAGTCTTAGAGATGGTCTGCACCCAGAGGGAATAAGGGGAGACATCCCCAACTGGAATGTGTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR-3UTR CCA 90 bp TTGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCGGTTTCCAGCCAGTCTaGGCTGCTCCCCCGTGCAGT +
Preference number: 2 (lower is better)
Translates to: LQERQLRGAVPWAFDPPGGFQPV*AAPPCS
Trigger: ACTGCACGGGGGAGCAGCCCAGACTGGCTGGAAACC...GCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CAA 90 bp GCGACGTCATCGGCGTGCCAGAGCTTTTCCTTGCAGGAGCGTCAGTaGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGAC +
Preference number: 2 (lower is better)
Translates to: ATSSACQSFSLQERQ*RGAVPWAFDPPGSD
Trigger: GTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGCACGCCGATGACGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp ACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGTTCCGGGAGAGCGGCTaGCCGACTCAGGTCCGCCCG +
Preference number: 2 (lower is better)
Translates to: TSTVPRRRAFPSAGLLAGFRESG*PTQVRP
Trigger: CGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAA...CCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCAGTTGCGGGGCGCAGTaGCCTGGGCGTTCGACCCTC +
Preference number: 2 (lower is better)
Translates to: ATWSWTRPATSSACQSFSSCGAQ*PGRSTL
Trigger: GAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACT...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp ACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGAGCTGGCTGCGGAGGTaGACCGCGTGCTGTGCCTCG +
Preference number: 2 (lower is better)
Translates to: TSTVPRRRAFPSAGLLAGSWLRR*TACCAS
Trigger: CGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCT...CCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGCAGGCTGGGCGACGGTaGCCTGTGGGGAGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVQAGRR*PVGRPH
Trigger: GTGGGGCCTCCCCACAGGCCACCGTCGCCCAGCCTG...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATCCCCTCTTGAGGTGGTaGCTTCTCACATCTGTCCAG +
Preference number: 2 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHPLLRW*LLTSVQ
Trigger: CTGGACAGATGTGAGAAGGCACCACCTCAAGAGGGG...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGTTCCGGGAGAGCGGCTaGCCGACTCAGGTCCGCCCG +
Preference number: 2 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATFRESG*PTQVRP
Trigger: CGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAA...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CAA 90 bp CTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATGTTaGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCG +
Preference number: 2 (lower is better)
Translates to: LRRCTACCASSGATC*SAAMLPWQPTSCRP
Trigger: CGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAACATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CAA 90 bp CCCACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTaGCTTGCAGGGCTGCAGCCCACTCCCATGACTTTGGTGTTCGGC +
Preference number: 2 (lower is better)
Translates to: PTSTVPRRRAFPSAG*LAGLQPTPMTLVFG
Trigger: GCCGAACACCAAAGTCATGGGAGTGGGCTGCAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR TCA 90 bp TTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGCAGTTCTCAGGCTCGTaGTCGAGAAGGCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: FPFQFRESGCPTQVRPTRQFSGS*SRRQVQ
Trigger: CTGCACCTGCCTTCTCGATCACGAGCCTGAGAACTG...CCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp CAGCAGCGCGGGGTGTTTGGCCGAGTCCTCACCGCCTTCTCCCGGGAACCTGACGATCGAGAAGGCAGGTaGAGCACTCAGCTGCCAGGA +
Preference number: 2 (lower is better)
Translates to: QQRGVFGRVLTAFSREPDDREGR*STQLPG
Trigger: TCCTGGCAGCTGAGTGCTGCACCTGCCTTCTCGATC...GTCAGGTTCCCGGGAGAAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGGATCGAGAAGGCAGGTaGAGCACTCAGCTGCCAGGA +
Preference number: 2 (lower is better)
Translates to: DILRTELAAEVHRVLCLEDREGR*STQLPG
Trigger: TCCTGGCAGCTGAGTGCTGCACCTGCCTTCTCGATC...CTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGTGCAGGAGCGTCAGTTaGGGGGCGCAGTGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRCRSVS*GAQCPG
Trigger: CCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCA...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGCCGTGCAGCGCATCCTaGCGACGGAGGGCGACATGG +
Preference number: 2 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVPCSAS*RRRATW
Trigger: CCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGG...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR TCA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGACGTGCAGGACATCCTaGGGACGGAGCTGGCTGCGG +
Preference number: 2 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATTCRTS*GRSWLR
Trigger: CCGCAGCCAGCTCCGTCCTCAGGATGTCCTGCACGT...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGACGTCCTGCAGACCGTaGAGCGCATCCTGGCGACGG +
Preference number: 2 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVTSCRP*SASWRR
Trigger: CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGT...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGTCTACCGCGACGAGGTaGAGAACGCCCAGCAGCGCG +
Preference number: 2 (lower is better)
Translates to: RGFWQERLHDIESKGEAGSTATR*RTPSSA
Trigger: CGCGCTGCTGGGCGTTCTGCACCTCGTCGCGGTAGA...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGGGTTTCCAGCCAGTCTaGGCTGCTCCCCCGTGCAGT +
Preference number: 2 (lower is better)
Translates to: VTMATNVLQTVQRILATEGFQPV*AAPPCS
Trigger: ACTGCACGGGGGAGCAGCCCAGACTGGCTGGAAACC...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGAGGGCGACATGGAGCTaGACGAGGCCGGCGACGTCA +
Preference number: 2 (lower is better)
Translates to: RGFWQERLHDIESKGEAGRATWS*TRPATS
Trigger: TGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCT...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGGCAGCGCGGGGTGTTTaGCCGAGTCCTCACCGCCTT +
Preference number: 2 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATAARGV*PSPHRL
Trigger: AAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGC...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGCAGGCTGGGCGACGGTaGCCTGTGGGGAGGCCCCAC +
Preference number: 2 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPQAGRR*PVGRPH
Trigger: GTGGGGCCTCCCCACAGGCCACCGTCGCCCAGCCTG...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CAA 90 bp CCAAGCGCGGGGTTGCTTGCAGGGCTGCAGCCCACTCCCATGACTTaGGTGTTCGGCTGCCGATGCTCCCAACTTGACCATCTCTACCGC +
Preference number: 2 (lower is better)
Translates to: PSAGLLAGLQPTPMT*VFGCRCSQLDHLYR
Trigger: GCGGTAGAGATGGTCAAGTTGGGAGCATCGGCAGCCGAACACCAAAGTCATGGGAGTGGGCTGCAGCCCTGCAAGCAACCCCGCGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR TCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGGACACCAACAGCCCCTaGGAGCCGCCTGGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: VCLRRCYHGNQRPADRAADTNSP*EPPGFP
Trigger: GGGAAAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTC...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGGGTGCAGCACTCAGCTaGCAGGAGTGGGGCCCTGAG +
Preference number: 2 (lower is better)
Translates to: VCLRRCYHGNQRPADRAAGAALS*QEWGPE
Trigger: CTCAGGGCCCCACTCCTGGCAGCTGAGTGCTGCACC...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGGCCCCACTAGCACTGTaGCCCGGAGAAGAGCCTTCC +
Preference number: 2 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVAPLAL*PGEEPS
Trigger: GGAAGGCTCTTCTCCGGGGCACAGTGCTAGTGGGGC...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGCCGTGCAGCGCATCCTaGCGACGGAGGGCGACATGG +
Preference number: 2 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRPCSAS*RRRATW
Trigger: CCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGG...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGTTCAGCCCAAAACGCTaGGCTGCCAGGCTGGGCGAC +
Preference number: 2 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVFSPKR*AARLGD
Trigger: GTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAA...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR TCA 90 bp CCGCGCTTCCCTTCCCTCTGTAAATCAGGGCTGTGCAGGGTCTCTGTGAAAGCAGACACCAACAGCCCCTaGGAGCCGCCTGGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: PRFPSLCKSGLCRVSVKADTNSP*EPPGFP
Trigger: GGGAAAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTC...TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACAGAGGGAAGGGAAGCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGTGGGCTGCTCCCCCGTaGAGTTCTCAGGCTCGTGAT +
Preference number: 2 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRWAAPP*SSQARD
Trigger: ATCACGAGCCTGAGAACTGCACGGGGGAGCAGCCCA...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGAGTTGCGGGGCGCAGTaGCCTGGGCGTTCGACCCTC +
Preference number: 2 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPSCGAQ*PGRSTL
Trigger: GAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACT...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGGCCAGAGCTTTTCCTTaGAGGAGCGTCAGTTGCGGG +
Preference number: 2 (lower is better)
Translates to: VTMATNVLQTVQRILATEARAFP*RSVSCG
Trigger: CCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGC...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGTGGCAACCAACGTCCTaGAGACCGTGCAGCGCATCC +
Preference number: 2 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVWQPTS*RPCSAS
Trigger: GGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCA...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGAGGGCGACATGGAGCTaGACGAGGCCGGCGACGTCA +
Preference number: 2 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQRATWS*TRPATS
Trigger: TGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCT...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR TCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGCAGTTCTCAGGCTCGTaGTCGAGAAGGCAGGTGCAG +
Preference number: 2 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRQFSGS*SRRQVQ
Trigger: CTGCACCTGCCTTCTCGATCACGAGCCTGAGAACTG...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR TCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCCTTGACCCTGCACTCTaGAAACATGGTTTCCAGCCA +
Preference number: 2 (lower is better)
Translates to: ATWSWTRPATSSACQSFSLDPAL*KHGFQP
Trigger: TGGCTGGAAACCATGTTTTCAGAGTGCAGGGTCAAG...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR TCA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGCAAGGTGTGAGACCCTaGGGGCGCAATGGTAACGTG +
Preference number: 2 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATQGVRP*GRNGNV
Trigger: CACGTTACCATTGCGCCCTCAGGGTCTCACACCTTG...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGGTGCAGCACTCAGCTaGCAGGAGTGGGGCCCTGAG +
Preference number: 2 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPGAALS*QEWGPE
Trigger: CTCAGGGCCCCACTCCTGGCAGCTGAGTGCTGCACC...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGTGGGCTGCTCCCCCGTaGAGTTCTCAGGCTCGTGAT +
Preference number: 2 (lower is better)
Translates to: VCLRRCYHGNQRPADRAAWAAPP*SSQARD
Trigger: ATCACGAGCCTGAGAACTGCACGGGGGAGCAGCCCA...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGCCAGCCAGTCTGGGCTaGTCCCCCGTGCAGTTCTCA +
Preference number: 2 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRPASLG*SPVQFS
Trigger: TGAGAACTGCACGGGGGAGCAGCCCAGACTGGCTGG...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGACGTCCTGCAGACCGTaGAGCGCATCCTGGCGACGG +
Preference number: 2 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPTSCRP*SASWRR
Trigger: CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGT...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAAAGCGCGGGGTTGCTTaGAGGGCTGCAGCCCACTCC +
Preference number: 2 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPKRGVA*RAAAHS
Trigger: GGAGTGGGCTGCAGCCCTGCAAGCAACCCCGCGCTT...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGCCCCTGAGAGCCGCCTaGCTTTCCCTTCCAGTTCCG +
Preference number: 2 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRPLRAA*LSLPVP
Trigger: CGGAACTGGAAGGGAAAGCCAGGCGGCTCTCAGGGG...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGCTAGGGACAGAGGGGTaGGGCTGGAAGGCAGGAAAT +
Preference number: 2 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVLGTEG*GWKAGN
Trigger: ATTTCCTGCCTTCCAGCCCCACCCCTCTGTCCCTAG...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CAA 90 bp CCCACCTGCCTCACTGTCGCCCTTCCATTTAGCTCGGCCTCATCCTaGACCTCTGTCCCCCACCTTGAGGAAACTCGAGGACTTCTTCCC +
Preference number: 2 (lower is better)
Translates to: PTCLTVALPFSSASS*TSVPHLEETRGLLP
Trigger: GGGAAGAAGTCCTCGAGTTTCCTCAAGGTGGGGGACAGAGGTCAAGGATGAGGCCGAGCTAAATGGAAGGGCGACAGTGAGGCAGGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR-3UTR TCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGCCAGAGGACGCCACTTaGCCCTGCACTCTGAAAACA +
Preference number: 2 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVPEDAT*PCTLKT
Trigger: TGTTTTCAGAGTGCAGGGTCAAGTGGCGTCCTCTGG...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGCCAGCCAGTCTGGGCTaGTCCCCCGTGCAGTTCTCA +
Preference number: 2 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPPASLG*SPVQFS
Trigger: TGAGAACTGCACGGGGGAGCAGCCCAGACTGGCTGG...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR TCA 90 bp CTGTCCCCCACCTTGAGGAAACTCGAGGACTTCTTCCCAGGCAGCTGCTCCAGGTCTAGATTCCAGAGATaGCCACCTCCCATCACCCCA +
Preference number: 2 (lower is better)
Translates to: LSPTLRKLEDFFPGSCSRSRFQR*PPPITP
Trigger: TGGGGTGATGGGAGGTGGTCATCTCTGGAATCTAGA...CCTGGAGCAGCTGCCTGGGAAGAAGTCCTCGAGTTTCCTCAAGGTGGGGGACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR-3UTR TCA 90 bp GGGAGCCACACCCACTTCCTGGGACATCACACCCGTACTGAAGTCCAAAAACATGGGCGAGTTCCTCACTaGCTCCCAGGTCCTGCCCAA +
Preference number: 2 (lower is better)
Translates to: GSHTHFLGHHTRTEVQKHGRVPH*LPGPAQ
Trigger: TTGGGCAGGACCTGGGAGTCAGTGAGGAACTCGCCC...ATGTTTTTGGACTTCAGTACGGGTGTGATGTCCCAGGAAGTGGGTGTGGCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR-3UTR TCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGCCGATGCTCCCAACTTaGCCATCTCTACCGCGACGA +
Preference number: 2 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRPMLPT*PSLPRR
Trigger: TCGTCGCGGTAGAGATGGTCAAGTTGGGAGCATCGG...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGGGCCACATGTTTGTCTaGGGCGATGTTACCATGGCA +
Preference number: 2 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVGHMFV*GDVTMA
Trigger: TGCCATGGTAACATCGCCGCAGACAAACATGTGGCC...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGGGCCACATGTTTGTCTaGGGCGATGTTACCATGGCA +
Preference number: 2 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATGHMFV*GDVTMA
Trigger: TGCCATGGTAACATCGCCGCAGACAAACATGTGGCC...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR TCA 90 bp CCGCGCTTCCCTTCCCTCTGTAAATCAGGGCTGTGCAGGGTCTCTGTGAAAGCACCAGAGGACGCCACTTaGCCCTGCACTCTGAAAACA +
Preference number: 2 (lower is better)
Translates to: PRFPSLCKSGLCRVSVKAPEDAT*PCTLKT
Trigger: TGTTTTCAGAGTGCAGGGTCAAGTGGCGTCCTCTGG...TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACAGAGGGAAGGGAAGCGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR TCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCACTTCTCCCGGGAACCTaGCAACCCCAAGGTGTGAGA +
Preference number: 2 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPLLPGT*QPQGVR
Trigger: TCTCACACCTTGGGGTTGTCAGGTTCCCGGGAGAAG...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR TCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGAAGGGCATGGAATTCTaGGTCCGAAGCCGCGCATTC +
Preference number: 2 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRKGMEF*VRSRAF
Trigger: GAATGCGCGGCTTCGGACTCAGAATTCCATGCCCTT...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR TCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCACTGAAAAGACGCTCATaGGACCAAGGGGAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPLKRRS*DQGEGR
Trigger: CCTGCCCTCCCCTTGGTCTCATGAGCGTCTTTTCAG...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GGTCCTGCCCAACTAAAGCACCTGGGCCTGTCATCTATGGGGCCTCTAACAATGCCAATCTCCTGTGGCTaGCGAAGCCAGGGTACCTGT +
Preference number: 2 (lower is better)
Translates to: GPAQLKHLGLSSMGPLTMPISCG*RSQGTC
Trigger: ACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGG...CATTGTTAGAGGCCCCATAGATGACAGGCCCAGGTGCTTTAGTTGGGCAGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR-3UTR GCA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGTGGCAACCAACGTCCTaGAGACCGTGCAGCGCATCC +
Preference number: 2 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKWQPTS*RPCSAS
Trigger: GGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCA...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGATATTGAGCATGGGGTaGCCAGGGTGGTCTGTCAAT +
Preference number: 2 (lower is better)
Translates to: RGFWQERLHDIESKGEAGILSMG*PGWSVN
Trigger: ATTGACAGACCACCCTGGGCACCCCATGCTCAATAT...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGTGCACTCTGAAAACATaGTTTCCAGCCAGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRCTLKT*FPASLG
Trigger: GCCCAGACTGGCTGGAAACCATGTTTTCAGAGTGCA...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGCCTCCCCTCTTGAGGTaGTGCCTTCTCACATCTGTC +
Preference number: 2 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQPPLLR*CLLTSV
Trigger: GACAGATGTGAGAAGGCACCACCTCAAGAGGGGAGG...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp CACCTCCCATCACCCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTCAAACCAACTACCTATaGCGTCCTTTCTCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: HLPSPQIPTTAPIASSRTQTNYL*RPFSLP
Trigger: GGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTG...AGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGGGTGATGGGAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR-3UTR GCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGTGTTCGGCTGCCGATaGTCCCAACTTGACCATCTC +
Preference number: 2 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPVFGCR*SQLDHL
Trigger: GAGATGGTCAAGTTGGGAGCATCGGCAGCCGAACAC...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGTCTGGCAGGAGCGGCTaGATGACATTGAGAGCAAAG +
Preference number: 2 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQSGRSG*MTLRAK
Trigger: CTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGA...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGTGCACTCTGAAAACATaGTTTCCAGCCAGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: VCLRRCYHGNQRPADRAACTLKT*FPASLG
Trigger: GCCCAGACTGGCTGGAAACCATGTTTTCAGAGTGCA...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGCGGCGATGTTACCATaGCAACCAACGTCCTGCAGA +
Preference number: 2 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPAAMLP*QPTSCR
Trigger: TCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGC...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAAGAACTGCCCAAGGTaGATTCTTGACTGTGCCAGA +
Preference number: 2 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVKNCPR*ILDCAR
Trigger: TCTGGCACAGTCAAGAATCCACCTTGGGCAGTTCTT...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR TCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAACAAGGTGTTCATATTaGGCATGGGGTGCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPTRCSY*AWGAQG
Trigger: ACCCTGGGCACCCCATGCTCAATATGAACACCTTGT...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GGTCCTGCCCAACTAAAGCACCTGGGCCTGTCATCTATGGGGCCTCTAACAATGCCAAATTCCCACCACTaGTCCCATCGCTTCAAGTCG +
Preference number: 2 (lower is better)
Translates to: GPAQLKHLGLSSMGPLTMPNSHH*SHRFKS
Trigger: CGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGG...CATTGTTAGAGGCCCCATAGATGACAGGCCCAGGTGCTTTAGTTGGGCAGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR-3UTR GCA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGCCCCTCTTGAGGTGGTaGCTTCTCACATCTGTCCAG +
Preference number: 2 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKPLLRW*LLTSVQ
Trigger: CTGGACAGATGTGAGAAGGCACCACCTCAAGAGGGG...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGACTTTGGTGTTCGGCTaGCGATGCTCCCAACTTGAC +
Preference number: 2 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKTLVFG*RCSQLD
Trigger: GTCAAGTTGGGAGCATCGGCAGCCGAACACCAAAGT...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CAA 90 bp AAAGCACCTGGGCCTGTCATCTATGGGGCCTCTAACAATGACTCCTaGTGTTTTTCTACTCCACCCTCCAATCTCCTGTGGCTGCCGAAG +
Preference number: 2 (lower is better)
Translates to: KAPGPVIYGASNNDS*CFSTPPSNLLWLPK
Trigger: CTTCGGCAGCCACAGGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCATTGTTAGAGGCCCCATAGATGACAGGCCCAGGTGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR-3UTR GCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGTGTAAATCAGGGCTGTaGAGGGTCTCTGTGAAAGCA +
Preference number: 2 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPCKSGL*RVSVKA
Trigger: TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACA...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR GCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGTGCGATGTCACACAATaGAAAGGGCATGGAATTCTG +
Preference number: 2 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQCDVTQ*KGHGIL
Trigger: CAGAATTCCATGCCCTTTGCATTGTGTGACATCGCA...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGGCAGCGCGGGGTGTTTaGCCGAGTCCTCACCGCCTT +
Preference number: 2 (lower is better)
Translates to: LCESILHSLRDETAKVMVAARGV*PSPHRL
Trigger: AAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGC...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGTTCAGCCCAAAACGCTaGGCTGCCAGGCTGGGCGAC +
Preference number: 2 (lower is better)
Translates to: LCESILHSLRDETAKVMVFSPKR*AARLGD
Trigger: GTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAA...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAATAGTAGGTGTTGACTaGATTGAGGACAAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPIVGVD*IEDKGK
Trigger: TTTTCCTTTGTCCTCAATCCAGTCAACACCTACTAT...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 72 bp TGCAGCGCATCCTGGCGACGGAGGGCGACATGGAGCTaGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGC +
Preference number: 3 (lower is better)
Translates to: CSASWRRRATWS*TRPATSSACQS
Trigger: GCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAGGATGCGCTGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 72 bp AGACCGTGCAGCGCATCCTGGCGACGGAGGGCGACATaGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGC +
Preference number: 3 (lower is better)
Translates to: RPCSASWRRRAT*SWTRPATSSAC
Trigger: GCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGGTCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp CGGCGTGCCAGAGCTTTTCCTTGCAGGAGCGTCAGTTaGGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCG +
Preference number: 3 (lower is better)
Translates to: RRARAFPCRSVS*GAQCPGRSTLP
Trigger: CGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGCACGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp GGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCTTaGAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: GRRRHRRARAFP*RSVSCGAQCPG
Trigger: CCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 72 bp AAACGCTGGGCTGCCAGGCTGGGCGACGGTGGCCTGTaGGGAGGCCCCACTAGCACTGTGCCCCGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: KRWAARLGDGGL*GGPTSTVPRRR
Trigger: TCTTCTCCGGGGCACAGTGCTAGTGGGGCCTCCCCACAGGCCACCGTCGCCCAGCCTGGCAGCCCAGCGTTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp AGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTaGCTCGAGCGGGGCCACATGTTTGTCTGCGGCGAT +
Preference number: 3 (lower is better)
Translates to: RTELAAEVHRVL*LERGHMFVCGD
Trigger: ATCGCCGCAGACAAACATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 72 bp TCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTaGCTTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: SRLRHQQPLRAA*LSLPVPGERLP
Trigger: GGGCAGCCGCTCTCCCGGAACTGGAAGGGAAAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 72 bp TCCTTGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTaGGCGTTCGACCCTCCCGGCTCAGACACCAACAGC +
Preference number: 3 (lower is better)
Translates to: SLQERQLRGAVP*AFDPPGSDTNS
Trigger: GCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 72 bp TGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTaGCGACGGAGGGCGACATGGAGCTGGACGAGGCCG +
Preference number: 3 (lower is better)
Translates to: WQPTSCRPCSAS*RRRATWSWTRP
Trigger: CGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp GCTTTTCCTTGCAGGAGCGTCAGTTGCGGGGCGCAGTaGCCTGGGCGTTCGACCCTCCCGGCTCAGACACCA +
Preference number: 3 (lower is better)
Translates to: AFPCRSVSCGAQ*PGRSTLPAQTP
Trigger: TGGTGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGAAAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp GCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTaGAGCGCATCCTGGCGACGGAGGGCGACATGGAGC +
Preference number: 3 (lower is better)
Translates to: AMLPWQPTSCRP*SASWRRRATWS
Trigger: GCTCCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp TTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTaGAGACCGTGCAGCGCATCCTGGCGACGGAGGGCG +
Preference number: 3 (lower is better)
Translates to: LSAAMLPWQPTS*RPCSASWRRRA
Trigger: CGCCCTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp GATGCTCCCAACTTGACCATCTCTACCGCGACGAGGTaGAGAACGCCCAGCAGCGCGGGGTGTTTGGCCGAG +
Preference number: 3 (lower is better)
Translates to: DAPNLTISTATR*RTPSSAGCLAE
Trigger: CTCGGCCAAACACCCCGCGCTGCTGGGCGTTCTGCACCTCGTCGCGGTAGAGATGGTCAAGTTGGGAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp GCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTaGAGGGCTGCAGCCCACTCCCATGACTTTGGTGTT +
Preference number: 3 (lower is better)
Translates to: APEKSLPKRGVA*RAAAHSHDFGV
Trigger: AACACCAAAGTCATGGGAGTGGGCTGCAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CAA 90 bp CCGCGCTTCCCTTCCCTCTGTAAATCAGGGCTGTGCAGGGTCTCTGTGAAAGCATTGCAGGAGCGTCAGTaGCGGGGCGCAGTGCCCTGG +
Preference number: 3 (lower is better)
Translates to: PRFPSLCKSGLCRVSVKALQERQ*RGAVPW
Trigger: CCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA...TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACAGAGGGAAGGGAAGCGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CAA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGAGCAGCGCGGGGTGTTaGGCCGAGTCCTCACCGCCT +
Preference number: 3 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQSSAGC*AESSPP
Trigger: AGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCT...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp CGCGTGCTGTGCCTCGAGCGGGGCCACATGTTTGTCTaGGGCGATGTTACCATGGCAACCAACGTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: RVLCLERGHMFV*GDVTMATNVLQ
Trigger: CTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAACATGTGGCCCCGCTCGAGGCACAGCACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 72 bp CCGACCAGGATCAGCCCCGCTCCTCCCCTCTTGAGGTaGTGCCTTCTCACATCTGTCCAGAGGACGCCACTT +
Preference number: 3 (lower is better)
Translates to: PTRISPAPPLLR*CLLTSVQRTPL
Trigger: AAGTGGCGTCCTCTGGACAGATGTGAGAAGGCACCACCTCAAGAGGGGAGGAGCGGGGCTGATCCTGGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CAA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGCCCACTCCCATGACTTaGGTGTTCGGCTGCCGATGC +
Preference number: 3 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATPTPMT*VFGCRC
Trigger: GCATCGGCAGCCGAACACCAAAGTCATGGGAGTGGG...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CAA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCACAAGCGCGGGGTTGCTaGCAGGGCTGCAGCCCACTC +
Preference number: 3 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPQARGC*QGCSPL
Trigger: GAGTGGGCTGCAGCCCTGCAAGCAACCCCGCGCTTG...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR TCA 72 bp ACCGCCTTCTCCCGGGAACCTGACAACCCCAAGGTGTaGGACCCTGAGGGCGCAATGGTAACGTGCAGGACA +
Preference number: 3 (lower is better)
Translates to: TAFSREPDNPKV*DPEGAMVTCRT
Trigger: TGTCCTGCACGTTACCATTGCGCCCTCAGGGTCTCACACCTTGGGGTTGTCAGGTTCCCGGGAGAAGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp GGGCTGCAGCCCACTCCCATGACTTTGGTGTTCGGCTaGCGATGCTCCCAACTTGACCATCTCTACCGCGAC +
Preference number: 3 (lower is better)
Translates to: GLQPTPMTLVFG*RCSQLDHLYRD
Trigger: GTCGCGGTAGAGATGGTCAAGTTGGGAGCATCGGCAGCCGAACACCAAAGTCATGGGAGTGGGCTGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 72 bp AGCGGGGCCACATGTTTGTCTGCGGCGATGTTACCATaGCAACCAACGTCCTGCAGACCGTGCAGCGCATCC +
Preference number: 3 (lower is better)
Translates to: SGATCLSAAMLP*QPTSCRPCSAS
Trigger: GGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAACATGTGGCCCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 72 bp AACAGCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTaGGCTGCCAGGCTGGGCGACGGTGGCCTGTGGGGA +
Preference number: 3 (lower is better)
Translates to: NSQSNGGFSPKR*AARLGDGGLWG
Trigger: TCCCCACAGGCCACCGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CAA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGTTCCCAAGCGCGGGGTaGCTTGCAGGGCTGCAGCCC +
Preference number: 3 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKFPSAG*LAGLQP
Trigger: GGGCTGCAGCCCTGCAAGCAACCCCGCGCTTGGGAA...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR TCA 72 bp GGTGAGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTaGTGGAGTGTCTCTCCTGCCAGGGCTCCCTCCTTC +
Preference number: 3 (lower is better)
Translates to: GENGGAGKAKGT*WSVSPARAPSF
Trigger: GAAGGAGGGAGCCCTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp AAACATGGTTTCCAGCCAGTCTGGGCTGCTCCCCCGTaGAGTTCTCAGGCTCGTGATCGAGAAGGCAGGTGC +
Preference number: 3 (lower is better)
Translates to: KHGFQPVWAAPP*SSQARDREGRC
Trigger: GCACCTGCCTTCTCGATCACGAGCCTGAGAACTGCACGGGGGAGCAGCCCAGACTGGCTGGAAACCATGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp CAGCCCACTCCCATGACTTTGGTGTTCGGCTGCCGATaGTCCCAACTTGACCATCTCTACCGCGACGAGGTG +
Preference number: 3 (lower is better)
Translates to: QPTPMTLVFGCR*SQLDHLYRDEV
Trigger: CACCTCGTCGCGGTAGAGATGGTCAAGTTGGGAGCATCGGCAGCCGAACACCAAAGTCATGGGAGTGGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp AGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATaGAAAGGGCATGGAATTCTGAGTCCGAAGCCGCGC +
Preference number: 3 (lower is better)
Translates to: SGSGEGDCDVTQ*KGHGILSPKPR
Trigger: GCGCGGCTTCGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CAA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGGCCGATGCTCCCAACTaGACCATCTCTACCGCGACG +
Preference number: 3 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPADAPN*TISTAT
Trigger: CGTCGCGGTAGAGATGGTCAAGTTGGGAGCATCGGC...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CAA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGCCCACTCCCATGACTTaGGTGTTCGGCTGCCGATGC +
Preference number: 3 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPPTPMT*VFGCRC
Trigger: GCATCGGCAGCCGAACACCAAAGTCATGGGAGTGGG...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR TCA 72 bp CCTACCTTTTCTCTGTTCTCGGGGCGAGTTCCTCACTaGCTCCCAGGTCCTGCCCAACTAAAGCACCTGGGC +
Preference number: 3 (lower is better)
Translates to: PTFSLFSGRVPH*LPGPAQLKHLG
Trigger: GCCCAGGTGCTTTAGTTGGGCAGGACCTGGGAGTCAGTGAGGAACTCGCCCCGAGAACAGAGAAAAGGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR TCA 72 bp CATGACTTTGGTGTTCGGCTGCCGATGCTCCCAACTTaGCCATCTCTACCGCGACGAGGTGCAGAACGCCCA +
Preference number: 3 (lower is better)
Translates to: HDFGVRLPMLPT*PSLPRRGAERP
Trigger: TGGGCGTTCTGCACCTCGTCGCGGTAGAGATGGTCAAGTTGGGAGCATCGGCAGCCGAACACCAAAGTCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp TGTGTTTTTCTACTCCACCCTCCAATCTCCTGTGGCTaGCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTC +
Preference number: 3 (lower is better)
Translates to: CVFLLHPPISCG*RSQGTCGRRRL
Trigger: GAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGAGGGTGGAGTAGAAAAACACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR GCA 72 bp CGCCAGCATGACGAATCCACAGCCTTAAAGCCCACCTaGCTCACTGTCGCCCTTCCATTTAGCTCGGCCTCA +
Preference number: 3 (lower is better)
Translates to: RQHDESTALKPT*LTVALPFSSAS
Trigger: TGAGGCCGAGCTAAATGGAAGGGCGACAGTGAGGCAGGTGGGCTTTAAGGCTGTGGATTCGTCATGCTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR-3UTR CAA 90 bp CATCCCCTACAAGCCCCAAGGAACCTGAAAGTGCTGCTGGCAGCCGCCAGCATGCAGGACACATTCCAGTaGGGGATGTCTCCCCTTATT +
Preference number: 3 (lower is better)
Translates to: HPLQAPRNLKVLLAAASMQDTFQ*GMSPLI
Trigger: AATAAGGGGAGACATCCCCAACTGGAATGTGTCCTG...CATGCTGGCGGCTGCCAGCAGCACTTTCAGGTTCCTTGGGGCTTGTAGGGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR TCA 72 bp TCACTGTCGCCCTTCCATTTAGCTCGGCCTCATCCTTaGCCTCTGTCCCCCACCTTGAGGAAACTCGAGGAC +
Preference number: 3 (lower is better)
Translates to: SLSPFHLARPHP*PLSPTLRKLED
Trigger: GTCCTCGAGTTTCCTCAAGGTGGGGGACAGAGGTCAAGGATGAGGCCGAGCTAAATGGAAGGGCGACAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR GCA 72 bp ACCTTGAGGAAACTCGAGGACTTCTTCCCAGGCAGCTaGTCCAGGACACATTCCAGTTGGGGATGTCTCCCC +
Preference number: 3 (lower is better)
Translates to: TLRKLEDFFPGS*SRTHSSWGCLP
Trigger: GGGGAGACATCCCCAACTGGAATGTGTCCTGGAGCAGCTGCCTGGGAAGAAGTCCTCGAGTTTCCTCAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR CCA 72 bp TCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCTGTaGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACG +
Preference number: 3 (lower is better)
Translates to: SLCFSTPPSNLL*LPKPGYLWEET
Trigger: CGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGAGGGTGGAGTAGAAAAACACAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR CCA 72 bp GGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATaGAATTCTGAGTCCGAAGCCGCGCATTCTAGCGCA +
Preference number: 3 (lower is better)
Translates to: GRGLRCHTMQRA*NSESEAAHSSA
Trigger: TGCGCTAGAATGCGCGGCTTCGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CAA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGTCCAGAGGACGCCACTaGACCCTGCACTCTGAAAAC +
Preference number: 3 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKSRGRH*TLHSEN
Trigger: GTTTTCAGAGTGCAGGGTCAAGTGGCGTCCTCTGGA...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR TCA 72 bp GAGCCACACCCACTTCCTGGGACATCACACCCGTACTaGAGTCCAAAAACATCATCCCTCCCGTCTTTCCAC +
Preference number: 3 (lower is better)
Translates to: EPHPLPGTSHPY*SPKTSSLPSFH
Trigger: GTGGAAAGACGGGAGGGATGATGTTTTTGGACTTCAGTACGGGTGTGATGTCCCAGGAAGTGGGTGTGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR CCA 72 bp AAGGGCTGGGCCCTGAGCTTCTGGCTTCCTGGTGCCTaGTACATAGTAGGTGTTGACTGGATTGAGGACAAA +
Preference number: 3 (lower is better)
Translates to: KGWALSFWLPGA*YIVGVDWIEDK
Trigger: TTTGTCCTCAATCCAGTCAACACCTACTATGTACCAGGCACCAGGAAGCCAGAAGCTCAGGGCCCAGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CAA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGTTCCCAAGCGCGGGGTaGCTTGCAGGGCTGCAGCCC +
Preference number: 3 (lower is better)
Translates to: LCESILHSLRDETAKVMVFPSAG*LAGLQP
Trigger: GGGCTGCAGCCCTGCAAGCAACCCCGCGCTTGGGAA...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CCA 72 bp TACAAGGTGTTCATATTGAGCATGGGGTGCCCAGGGTaGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGG +
Preference number: 3 (lower is better)
Translates to: YKVFILSMGCPG*SVNQKKRAVTG
Trigger: CCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCATGCTCAATATGAACACCTTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp TTCCAGTTGGGGATGTCTCCCCTTATTCCCTCTGGGTaGAGACCATCTCTAAGACTTGTTTCCAGATGCCAT +
Preference number: 3 (lower is better)
Translates to: FQLGMSPLIPSG*RPSLRLVSRCH
Trigger: ATGGCATCTGGAAACAAGTCTTAGAGATGGTCTGCACCCAGAGGGAATAAGGGGAGACATCCCCAACTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR TCA 72 bp TGTCCAAGACCTAAGGATGCTACAAGGTGTTCATATTaGGCATGGGGTGCCCAGGGTGGTCTGTCAATCAAA +
Preference number: 3 (lower is better)
Translates to: CPRPKDATRCSY*AWGAQGGLSIK
Trigger: TTTGATTGACAGACCACCCTGGGCACCCCATGCTCAATATGAACACCTTGTAGCATCCTTAGGTCTTGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR GCA 72 bp TCTGGGTGCAGACCATCTCTAAGACTTGTTTCCAGATaGCATCAGCATCTCCTCTCCTTGCCTACCTTTTCT +
Preference number: 3 (lower is better)
Translates to: SGCRPSLRLVSR*HQHLLSLPTFS
Trigger: AGAAAAGGTAGGCAAGGAGAGGAGATGCTGATGGCATCTGGAAACAAGTCTTAGAGATGGTCTGCACCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
3UTR-3UTR CAA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGTGCCAGAGCTTTTCCTaGCAGGAGCGTCAGTTGCGG +
Preference number: 3 (lower is better)
Translates to: LCESILHSLRDETAKVMVCQSFS*QERQLR
Trigger: CCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGCA...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR-3UTR CAA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGTCCAGAGGACGCCACTaGACCCTGCACTCTGAAAAC +
Preference number: 3 (lower is better)
Translates to: LCESILHSLRDETAKVMVSRGRH*TLHSEN
Trigger: GTTTTCAGAGTGCAGGGTCAAGTGGCGTCCTCTGGA...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CGGCTGCCCGACTCAGGTCCGCCCGACCAGGATCAGCCCCGCTCCTCCCCTCTTTGGCGACGGTGGCGGTaGCCCCGAGCGCGGTCATGG +
Preference number: 4 (lower is better)
Translates to: RLPDSGPPDQDQPRSSPLWRRWR*PRARSW
Trigger: CCATGACCGCGCTCGGGGTCACCGCCACCGTCGCCA...AAGAGGGGAGGAGCGGGGCTGATCCTGGTCGGGCGGACCTGAGTCGGGCAGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CTGGCGACGGAGGGCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCAGGCTGGGCGACGGTaGCCTGTGGGGAGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LATEGDMELDEAGDVIGVQAGRR*PVGRPH
Trigger: GTGGGGCCTCCCCACAGGCCACCGTCGCCCAGCCTG...CACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATTTCCGGGAGAGCGGCTaGCCGACTCAGGTCCGCCCG +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHFRESG*PTQVRP
Trigger: CGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAA...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CAGCAGCGCGGGGTGTTTGGCCGAGTCCTCACCGCCTTCTCCCGGGAACCTGACGCGCCAGGCCGCGGCTaGGGAAAGCCGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: QQRGVFGRVLTAFSREPDAPGRG*GKPHCL
Trigger: GAGGCAGTGCGGCTTTCCTCAGCCGCGGCCTGGCGC...GTCAGGTTCCCGGGAGAAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp TTGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCGCGCGGTCATGGCGGTaGGCACGTGCTCCACGGCTA +
Preference number: 4 (lower is better)
Translates to: LQERQLRGAVPWAFDPPGARSWR*ARAPRL
Trigger: TAGCCGTGGAGCACGTGCTCACCGCCATGACCGCGC...GCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTTGGCGACGGTGGCGGTaGCCCCGAGCGCGGTCATGG +
Preference number: 4 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLWRRWR*PRARSW
Trigger: CCATGACCGCGCTCGGGGTCACCGCCACCGTCGCCA...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CTGGCGACGGAGGGCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGTGCAGGAGCGTCAGTTaGGGGGCGCAGTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LATEGDMELDEAGDVIGVCRSVS*GAQCPG
Trigger: CCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCA...CACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATGTGCACCGCGTGCTGTaGCTCGAGCGGGGCCACATG +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHVHRVL*LERGHM
Trigger: CATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCAC...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CTGGCGACGGAGGGCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGGAGGACGGAGCTGGCTaGGGAGGTGCACCGCGTGCT +
Preference number: 4 (lower is better)
Translates to: LATEGDMELDEAGDVIGVEDGAG*GGAPRA
Trigger: AGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTC...CACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACACGACGGAGGGCGACATaGAGCTGGACGAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTRRRAT*SWTRPA
Trigger: CGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCG...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CTGGCGACGGAGGGCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGACTGCTGTGAGGGAGTaGGGGTTGCCGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: LATEGDMELDEAGDVIGVTAVRE*GLPGPG
Trigger: CCCTGGCCCCGGCAACCCCCACTCCCTCACAGCAGT...CACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CAGCAGCGCGGGGTGTTTGGCCGAGTCCTCACCGCCTTCTCCCGGGAACCTGACAGGCGAGGGTGGCTGTaGGGGGCTGGAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: QQRGVFGRVLTAFSREPDRRGWL*GAGAGP
Trigger: AGGCCCTGCTCCAGCCCCTCACAGCCACCCTCGCCT...GTCAGGTTCCCGGGAGAAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACATGCAGGAGCGTCAGTTaGGGGGCGCAGTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTCRSVS*GAQCPG
Trigger: CCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCA...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATGCGGGACTGCACCTCTaGCCAGGGAACCGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHAGLHL*PGNRAQ
Trigger: CTGAGCTCGGTTCCCTGGGCAGAGGTGCAGTCCCGC...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp TTGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTTGAAGTGGCGCAGCTaGAAGCGCGCCAGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: LQERQLRGAVPWAFDPPGLKWRS*KRARRD
Trigger: GTCCCGCCTGGCGCGCTTGCAGCTGCGCCACTTCAA...GCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACACGCGCGCGCAGCTCGTaGGGCAGCTCGTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTRARSS*GSSLKW
Trigger: CCACTTCAACGAGCTGCCGCACGAGCTGCGCGCGCG...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACAGTCTGCAGCAGGAGCTaGGGCGCACGACCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTVCSRS*GARPWH
Trigger: GTGCCAGGGTCGTGCGCCGCAGCTCCTGCTGCAGAC...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATAAGCGCGGGGTTGCTTaGAGGGCTGCAGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHKRGVA*RAAAHS
Trigger: GGAGTGGGCTGCAGCCCTGCAAGCAACCCCGCGCTT...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp TTGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCGCAGCGCGGGGTGTTTaGCCGAGTCCTCACCGCCTT +
Preference number: 4 (lower is better)
Translates to: LQERQLRGAVPWAFDPPGAARGV*PSPHRL
Trigger: AAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGC...GCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CGGCTGCCCGACTCAGGTCCGCCCGACCAGGATCAGCCCCGCTCCTCCCCTCTTGGCAGCTCGTTGAAGTaGCGCAGCTGCAAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: RLPDSGPPDQDQPRSSPLGSSLK*RSCKRA
Trigger: GGCGCGCTTGCAGCTGCGCCACTTCAACGAGCTGCC...AAGAGGGGAGGAGCGGGGCTGATCCTGGTCGGGCGGACCTGAGTCGGGCAGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATTGGAGGCAAGGAGGCTaGCTGTGGCCGCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHWRQGG*LWPQLD
Trigger: GTCCAGCTGCGGCCACAGCCAGCCTCCTTGCCTCCA...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCGCTGGGCTGCCAGGCTaGGCGACGGTGGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSAGLPG*ATVACG
Trigger: CCCACAGGCCACCGTCGCCCAGCCTGGCAGCCCAGC...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACACCTCGTCGTAGACGGTaGGCACAAGCAGCGCGGCGA +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTPRRRR*AQAARR
Trigger: TCGCCGCGCTGCTTGTGCTCACCGTCTACGACGAGG...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp AGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTGGCGAGGTGCAGTTGCTaGGCACCCCCGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: STVPRRRAFPSAGLLAGLARCSC*APPGWR
Trigger: CCTCCACCCCGGGGGTGCTCAGCAACTGCACCTCGC...CAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTGTTCCGGGAGAGCGGCTaGCCGACTCAGGTCCGCCCG +
Preference number: 4 (lower is better)
Translates to: STVPRRRAFPSAGLLAGLFRESG*PTQVRP
Trigger: CGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAA...CAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTAGTTGCGGGGCGCAGTaGCCTGGGCGTTCGACCCTC +
Preference number: 4 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLSCGAQ*PGRSTL
Trigger: GAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACT...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTAGCTGGCTGCGGAGGTaGACCGCGTGCTGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLSWLRR*TACCAS
Trigger: CGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCT...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp TTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGCCAGCAGCAGCACTGTaGGCCCCCAGCGCGCTGCTA +
Preference number: 4 (lower is better)
Translates to: FPFQFRESGCPTQVRPTRPAAAL*APSALL
Trigger: TAGCAGCGCGCTGGGGGCGCACAGTGCTGCTGCTGG...CCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp TTGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCGAGACCGCTCGGTACTaGAGCAGCTGCGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: LQERQLRGAVPWAFDPPGETARY*SSCAIC
Trigger: GCAGATGGCGCAGCTGCTGCAGTACCGAGCGGTCTC...GCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACAGGGCGCCAGAGTGGATaGGCCAGGGAGAACCGCATC +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTGRQSG*ARENRI
Trigger: GATGCGGTTCTCCCTGGCGCATCCACTCTGGCGCCC...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACAGGACAGGATGGAGGCTaGAGCCTCACCCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTGQDGG*SLTPRL
Trigger: GAGCCGTGGGGTGAGGCTGCAGCCTCCATCCTGTCC...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCCCAAAACGCTGGGCTaGCAGGCTGGGCGACGGTGG +
Preference number: 4 (lower is better)
Translates to: DILRTELAAEVHRVLCLEPKTLG*QAGRRW
Trigger: CCACCGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGG...CTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGACTGCTGTGAGGGAGTaGGGGTTGCCGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: DILRTELAAEVHRVLCLETAVRE*GLPGPG
Trigger: CCCTGGCCCCGGCAACCCCCACTCCCTCACAGCAGT...CTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CTGGCGACGGAGGGCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGTGCGGCGCACGACCCTaGCACTGCTCTTCCGGAATG +
Preference number: 4 (lower is better)
Translates to: LATEGDMELDEAGDVIGVCGARP*HCSSGM
Trigger: CATTCCGGAAGAGCAGTGCCAGGGTCGTGCGCCGCA...CACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCAAGGAGGCTGGCTGTaGCCGCAGCTGGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: DILRTELAAEVHRVLCLEQGGWL*PQLDRG
Trigger: CCCCCTGTCCAGCTGCGGCCACAGCCAGCCTCCTTG...CTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATGGTTTCCAGCCAGTCTaGGCTGCTCCCCCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHGFQPV*AAPPCS
Trigger: ACTGCACGGGGGAGCAGCCCAGACTGGCTGGAAACC...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCAGGCTGGGCGACGGTaGCCTGTGGGGAGGCCCCAC +
Preference number: 4 (lower is better)
Translates to: TSTVPRRRAFPSAGLLAGQAGRR*PVGRPH
Trigger: GTGGGGCCTCCCCACAGGCCACCGTCGCCCAGCCTG...CCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CAGCAGCGCGGGGTGTTTGGCCGAGTCCTCACCGCCTTCTCCCGGGAACCTGACCGTGCGGCAGCTCGTTaGAGTGGCGCAGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: QQRGVFGRVLTAFSREPDRAAAR*SGAAAS
Trigger: GCTTGCAGCTGCGCCACTTCAACGAGCTGCCGCACG...GTCAGGTTCCCGGGAGAAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCCCGTCCTCCGCACGCTaGGACAGCGAGGCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSPSSAR*DSEASV
Trigger: GACTGAGGCCTCGCTGTCTCAGCGTGCGGAGGACGG...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CACCCTCCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGAGGCGAGGGTGGCTGTaGGGGGCTGGAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HPPISCGCRSQGTCGRRRRRGWL*GAGAGP
Trigger: AGGCCCTGCTCCAGCCCCTCACAGCCACCCTCGCCT...CCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGAGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp CGGCTGCCCGACTCAGGTCCGCCCGACCAGGATCAGCCCCGCTCCTCCCCTCTTTGCAGCCCACTCCCATaGCTTTGGTGTTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RLPDSGPPDQDQPRSSPLCSPLP*LWCSAA
Trigger: GGCAGCCGAACACCAAAGTCATGGGAGTGGGCTGCA...AAGAGGGGAGGAGCGGGGCTGATCCTGGTCGGGCGGACCTGAGTCGGGCAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTCTCCCTCCTTCCGGCTaGCACCCGATCCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLLPPSG*HPIPAC
Trigger: GCAAGCTGGGATCGGGTGGCAGCCGGAAGGAGGGAG...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACAGCCCCACTAGCACTGTaGCCCGGAGAAGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTAPLAL*PGEEPS
Trigger: GGAAGGCTCTTCTCCGGGGCACAGTGCTAGTGGGGC...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTAGGGCGACATGGAGCTaGACGAGGCCGGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLRATWS*TRPATS
Trigger: TGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCT...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTGAGGTGGCAGTGGCATaGGGAGGAGGGGCACCGATC +
Preference number: 4 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLEVAVA*GGGAPI
Trigger: GATCGGTGCCCCTCCTCCCCATGCCACTGCCACCTC...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCCAAGGAGGCTGGCTGTaGCCGCAGCTGGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSQGGWL*PQLDRG
Trigger: CCCCCTGTCCAGCTGCGGCCACAGCCAGCCTCCTTG...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CAA 72 bp TCGGCGTGCCAGAGCTTTTCCTTGCAGGAGCGTCAGTaGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCC +
Preference number: 4 (lower is better)
Translates to: SACQSFSLQERQ*RGAVPWAFDPP
Trigger: GGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGCACGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CAA 72 bp AGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCTaGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RPATSSACQSFS*QERQLRGAVPW
Trigger: CCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCCCTCGTCGTAGACGGTaGGCACAAGCAGCGCGGCGA +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSPRRRR*AQAARR
Trigger: TCGCCGCGCTGCTTGTGCTCACCGTCTACGACGAGG...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGAGGCGAGGGTGGCTGTaGGGGGCTGGAGCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: VTMATNVLQTVQRILATERRGWL*GAGAGP
Trigger: AGGCCCTGCTCCAGCCCCTCACAGCCACCCTCGCCT...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp TTGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCGTGTCTGTGGTCACCTaGAACCCTCCGGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: LQERQLRGAVPWAFDPPGVSVVT*NPPGNR
Trigger: TCTGTTCCCCGGAGGGTTTCAGGTGACCACAGACAC...GCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATCCGATGCTCCCAACTTaGCCATCTCTACCGCGACGA +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHPMLPT*PSLPRR
Trigger: TCGTCGCGGTAGAGATGGTCAAGTTGGGAGCATCGG...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CACCCTCCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCCCGCTCCGCTGCAGTaGCAAGAGGCGGGACTGCAC +
Preference number: 4 (lower is better)
Translates to: HPPISCGCRSQGTCGRRRPAPLQ*QEAGLH
Trigger: GTGCAGTCCCGCCTCTTGGCACTGCAGCGGAGCGGG...CCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGAGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATTGGTGTAGCGCAGGATaGGGTGGTGGATGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHWCSAG*GGGCPA
Trigger: AGCTGGACATCCACCACCGCATCCTGCGCTACACCA...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCTTGAAGTGGCGCAGCTaGAAGCGCGCCAGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSLKWRS*KRARRD
Trigger: GTCCCGCCTGGCGCGCTTGCAGCTGCGCCACTTCAA...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp TTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGGGAGGCAGGAGAGGGTaGACGAAGAGGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FPFQFRESGCPTQVRPTRGGRRG*TKRLAR
Trigger: CCTGGCCAACCTCTTCGTGCACCCTCTCCTGCCTCC...CCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CAGCAGCGCGGGGTGTTTGGCCGAGTCCTCACCGCCTTCTCCCGGGAACCTGACGGAGGCAGGAGAGGGTaGACGAAGAGGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: QQRGVFGRVLTAFSREPDGGRRG*TKRLAR
Trigger: CCTGGCCAACCTCTTCGTGCACCCTCTCCTGCCTCC...GTCAGGTTCCCGGGAGAAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATAGTCGTCTCAGTCAGTaGAAGAGGCCCGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHSRLSQ*KRPGQA
Trigger: AGCCTGACCGGGCCTCTTGCACTGACTGAGACGACT...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTGGGTGCAGCACTCAGCTaGCAGGAGTGGGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: STVPRRRAFPSAGLLAGLGAALS*QEWGPE
Trigger: CTCAGGGCCCCACTCCTGGCAGCTGAGTGCTGCACC...CAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACATGGGCTGCTCCCCCGTaGAGTTCTCAGGCTCGTGAT +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTWAAPP*SSQARD
Trigger: ATCACGAGCCTGAGAACTGCACGGGGGAGCAGCCCA...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCCAGCCAGTCTGGGCTaGTCCCCCGTGCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: DILRTELAAEVHRVLCLEPASLG*SPVQFS
Trigger: TGAGAACTGCACGGGGGAGCAGCCCAGACTGGCTGG...CTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CTGGCGACGGAGGGCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGGCCAGAGCTTTTCCTTaGAGGAGCGTCAGTTGCGGG +
Preference number: 4 (lower is better)
Translates to: LATEGDMELDEAGDVIGVARAFP*RSVSCG
Trigger: CCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGC...CACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACATCCAGGCACTGGCATTaGCCCCTTCCGGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTSRHWH*PLPGIL
Trigger: CAGAATCCCCGGAAGGGGGCAATGCCAGTGCCTGGA...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATGGGACAGAGAGAAGATaGAGATCCTCCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHGTERR*RSSLPQ
Trigger: CTGGGGGAGGGAGGATCTCCATCTTCTCTCTGTCCC...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp AGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTGGGCAGCTCGTTGAAGTaGCGCAGCTGCAAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: STVPRRRAFPSAGLLAGLGSSLK*RSCKRA
Trigger: GGCGCGCTTGCAGCTGCGCCACTTCAACGAGCTGCC...CAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp AGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTGGCGAAGAAAACGAGCTaGCGGGCCAGCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: STVPRRRAFPSAGLLAGLAKKTS*RASSVR
Trigger: GCGCACGCTGCTGGCCCGCCAGCTCGTTTTCTTCGC...CAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTCTTAGAGCTGTGCCCTaGGGGGCGCCAGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLLRAVP*GAPEWM
Trigger: CATCCACTCTGGCGCCCCCCAGGGCACAGCTCTAAG...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTGGGCCGCGAGCCGAGGTaGCACCCCAGGCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PISCGCRSQGTCGRRRLLGREPR*HPRQLH
Trigger: ATGCAGCTGCCTGGGGTGCCACCTCGGCTCGCGGCC...CAAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACAGGTGCACGAAGAGGTTaGCCAGGAAGGCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTGARRG*PGRPQA
Trigger: TGCCTGAGGCCTTCCTGGCCAACCTCTTCGTGCACC...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp TTGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCGGGCAATTCGGGAAATaGAGGCAAGGAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LQERQLRGAVPWAFDPPGGQFGK*RQGGWL
Trigger: CAGCCAGCCTCCTTGCCTCCATTTCCCGAATTGCCC...GCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CAGCAGCGCGGGGTGTTTGGCCGAGTCCTCACCGCCTTCTCCCGGGAACCTGACCTCAGCTGCCAGGAGTaGGGCCCTGAGGAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: QQRGVFGRVLTAFSREPDLSCQE*GPEESS
Trigger: AGACGACTCCTCAGGGCCCCACTCCTGGCAGCTGAG...GTCAGGTTCCCGGGAGAAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGGCTGGGCTGCCAGGCTaGGCGACGGTGGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATAGLPG*ATVACG
Trigger: CCCACAGGCCACCGTCGCCCAGCCTGGCAGCCCAGC...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp TTGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCACCAAAGGCAAGGGCTaGGCCCTGAGCTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LQERQLRGAVPWAFDPPGTKGKG*ALSFWL
Trigger: AAGCCAGAAGCTCAGGGCCCAGCCCTTGCCTTTGGT...GCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CAGCAGCGCGGGGTGTTTGGCCGAGTCCTCACCGCCTTCTCCCGGGAACCTGACCCCTTCCGGGGATTCTaGCAGGAGCGGCTGCATGAC +
Preference number: 4 (lower is better)
Translates to: QQRGVFGRVLTAFSREPDPFRGF*QERLHD
Trigger: GTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGG...GTCAGGTTCCCGGGAGAAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp ACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGGACACCAACAGCCCCTaGGAGCCGCCTGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: TSTVPRRRAFPSAGLLAGDTNSP*EPPGFP
Trigger: GGGAAAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTC...CCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp TTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGAGCCCTTCAGGGACATaGAGCAGGGGTTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FPFQFRESGCPTQVRPTRSPSGT*SRGCCS
Trigger: GGAGCAGCAACCCCTGCTTCATGTCCCTGAAGGGCT...CCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp TTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGTCCAGGTTCTGGATGTaGTGCCAGGAGCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: FPFQFRESGCPTQVRPTRSRFWM*CQEPRS
Trigger: GCTCCGAGGCTCCTGGCATCACATCCAGAACCTGGA...CCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTGCCGTCCTCCGCACGCTaGGACAGCGAGGCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: PISCGCRSQGTCGRRRLLPSSAR*DSEASV
Trigger: GACTGAGGCCTCGCTGTCTCAGCGTGCGGAGGACGG...CAAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGGCGAGGTGCAGTTGCTaGGCACCCCCGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVARCSC*APPGWR
Trigger: CCTCCACCCCGGGGGTGCTCAGCAACTGCACCTCGC...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGTGCAGCCCACTCCCATaGCTTTGGTGTTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DILRTELAAEVHRVLCLECSPLP*LWCSAA
Trigger: GGCAGCCGAACACCAAAGTCATGGGAGTGGGCTGCA...CTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATAAGGGCATGGAATTCTaGGTCCGAAGCCGCGCATTC +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHKGMEF*VRSRAF
Trigger: GAATGCGCGGCTTCGGACTCAGAATTCCATGCCCTT...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGACGTCCTGCAGACCGTaGAGCGCATCCTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: TSTVPRRRAFPSAGLLAGTSCRP*SASWRR
Trigger: CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGT...CCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTTGGCAACCAACGTCCTaGAGACCGTGCAGCGCATCC +
Preference number: 4 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLWQPTS*RPCSAS
Trigger: GGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCA...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCCCCCGCTCCGCTaGAGTGCCAAGAGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVRPPLR*SAKRRD
Trigger: GTCCCGCCTCTTGGCACTGCAGCGGAGCGGGGGCCT...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGGCCCCCGCTCCGCTaGAGTGCCAAGAGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRRPPLR*SAKRRD
Trigger: GTCCCGCCTCTTGGCACTGCAGCGGAGCGGGGGCCT...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CCATCCCCTACAAGCCCCAAGGAACCTGAAAGTGCTGCTGGCAGCCGCCAGCATCGCCCCGCTGGTCGCTaGGCTTGTAGGCGTGCGGCA +
Preference number: 4 (lower is better)
Translates to: PSPTSPKEPESAAGSRQHRPAGR*ACRRAA
Trigger: TGCCGCACGCCTACAAGCGCAGCGACCAGCGGGGCG...ATGCTGGCGGCTGCCAGCAGCACTTTCAGGTTCCTTGGGGCTTGTAGGGGATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGCGCCCCGCTGGTCGCTaGGCTTGTAGGCGTGCGGCA +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRRPAGR*ACRRAA
Trigger: TGCCGCACGCCTACAAGCGCAGCGACCAGCGGGGCG...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCAGCGCGGCGAAGAGTaGACCCGCGAAGAAAACGAG +
Preference number: 4 (lower is better)
Translates to: DILRTELAAEVHRVLCLEQRGEE*TREENE
Trigger: CTCGTTTTCTTCGCGGGTGCACTCTTCGCCGCGCTG...CTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CAGCAGCGCGGGGTGTTTGGCCGAGTCCTCACCGCCTTCTCCCGGGAACCTGACTCCAGGCACTGGCATTaGCCCCTTCCGGGGATTCTG +
Preference number: 4 (lower is better)
Translates to: QQRGVFGRVLTAFSREPDSRHWH*PLPGIL
Trigger: CAGAATCCCCGGAAGGGGGCAATGCCAGTGCCTGGA...GTCAGGTTCCCGGGAGAAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CGGCTGCCCGACTCAGGTCCGCCCGACCAGGATCAGCCCCGCTCCTCCCCTCTTTTGCTCCACCCACCCTaGATGGTGAGAATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RLPDSGPPDQDQPRSSPLLLHPP*MVRMVE
Trigger: CTCCACCATTCTCACCATGCAGGGTGGGTGGAGCAA...AAGAGGGGAGGAGCGGGGCTGATCCTGGTCGGGCGGACCTGAGTCGGGCAGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACAAACTTGGGTCCTCCTTaGTCCACCCACCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTNLGPP*STHPAW
Trigger: CCATGCAGGGTGGGTGGAGCAAGGAGGACCCAAGTT...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGTCTACCGCGACGAGGTaGAGAACGCCCAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: TSTVPRRRAFPSAGLLAGSTATR*RTPSSA
Trigger: CGCGCTGCTGGGCGTTCTGCACCTCGTCGCGGTAGA...CCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CTGGCGACGGAGGGCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCTCCCCTCTTGAGGTaGTGCCTTCTCACATCTGTC +
Preference number: 4 (lower is better)
Translates to: LATEGDMELDEAGDVIGVPPLLR*CLLTSV
Trigger: GACAGATGTGAGAAGGCACCACCTCAAGAGGGGAGG...CACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATCCTCCCCTCTTGAGGTaGTGCCTTCTCACATCTGTC +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHPPLLR*CLLTSV
Trigger: GACAGATGTGAGAAGGCACCACCTCAAGAGGGGAGG...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGCGACGGAGGGCGACATaGAGCTGGACGAGGCCGGCG +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRRRRAT*SWTRPA
Trigger: CGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCG...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACATGGATGGGTGAGTCTTaGGACCCCTCAGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTWMGES*DPSGSQ
Trigger: CTGTGACCCTGAGGGGTCCCAAGACTCACCCATCCA...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGGGCCGCGAGCCGAGGTaGCACCCCAGGCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVGREPR*HPRQLH
Trigger: ATGCAGCTGCCTGGGGTGCCACCTCGGCTCGCGGCC...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp AGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTGCTGGGGACACAGAGCTaGGGTCCTGGGCAATTCGGG +
Preference number: 4 (lower is better)
Translates to: STVPRRRAFPSAGLLAGLLGTQS*GPGQFG
Trigger: CCCGAATTGCCCAGGACCCCAGCTCTGTGTCCCCAG...CAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp TTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGTGGGCCCTGAGCTTCTaGCTTCCTGGTGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: FPFQFRESGCPTQVRPTRWALSF*LPGAWY
Trigger: GTACCAGGCACCAGGAAGCCAGAAGCTCAGGGCCCA...CCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGGGCGACGGTGGCCTGTaGGGAGGCCCCACTAGCACT +
Preference number: 4 (lower is better)
Translates to: VTMATNVLQTVQRILATEGDGGL*GGPTST
Trigger: AGTGCTAGTGGGGCCTCCCCACAGGCCACCGTCGCC...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCTTCTCCCGGGAACCTaGCAACCCCAAGGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: DILRTELAAEVHRVLCLELLPGT*QPQGVR
Trigger: TCTCACACCTTGGGGTTGTCAGGTTCCCGGGAGAAG...CTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CCATCCCCTACAAGCCCCAAGGAACCTGAAAGTGCTGCTGGCAGCCGCCAGCATCCCAGGTCCCCGGCATaGAGGAGGAGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSPTSPKEPESAAGSRQHPRSPA*RRRRRW
Trigger: CCACCTCCTCCTCCTCCTTCATGCCGGGGACCTGGG...ATGCTGGCGGCTGCCAGCAGCACTTTCAGGTTCCTTGGGGCTTGTAGGGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGCCCAGGTCCCCGGCATaGAGGAGGAGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVPRSPA*RRRRRW
Trigger: CCACCTCCTCCTCCTCCTTCATGCCGGGGACCTGGG...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp ACCTGCCTCACTGTCGCCCTTCCATTTAGCTCGGCCTCATCCTTGACCTCTGTCGCGCCAGGCCGCGGCTaGGGAAAGCCGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: TCLTVALPFSSASSLTSVAPGRG*GKPHCL
Trigger: GAGGCAGTGCGGCTTTCCTCAGCCGCGGCCTGGCGC...GACAGAGGTCAAGGATGAGGCCGAGCTAAATGGAAGGGCGACAGTGAGGCAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGGCGCGGTCATGGCGGTaGGCACGTGCTCCACGGCTA +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVARSWR*ARAPRL
Trigger: TAGCCGTGGAGCACGTGCTCACCGCCATGACCGCGC...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGCCGTCCTCCGCACGCTaGGACAGCGAGGCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVPSSAR*DSEASV
Trigger: GACTGAGGCCTCGCTGTCTCAGCGTGCGGAGGACGG...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CACCCTCCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGGCTCGGCCTCATCCTTaGCCTCTGTCCCCCACCTTG +
Preference number: 4 (lower is better)
Translates to: HPPISCGCRSQGTCGRRRARPHP*PLSPTL
Trigger: CAAGGTGGGGGACAGAGGTCAAGGATGAGGCCGAGC...CCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGAGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp CAGCAGCGCGGGGTGTTTGGCCGAGTCCTCACCGCCTTCTCCCGGGAACCTGACCAGTTCTCAGGCTCGTaGTCGAGAAGGCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: QQRGVFGRVLTAFSREPDQFSGS*SRRQVQ
Trigger: CTGCACCTGCCTTCTCGATCACGAGCCTGAGAACTG...GTCAGGTTCCCGGGAGAAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGGTGCACCGCGTGCTGTaGCTCGAGCGGGGCCACATG +
Preference number: 4 (lower is better)
Translates to: RGFWQERLHDIESKGEAGVHRVL*LERGHM
Trigger: CATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCAC...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGCGGAGGTGCACCGCGTaGTGTGCCTCGAGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRRRCTA*CASSGA
Trigger: GGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCG...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGCCAGCAGCAGCACTGTaGGCCCCCAGCGCGCTGCTA +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRPAAAL*APSALL
Trigger: TAGCAGCGCGCTGGGGGCGCACAGTGCTGCTGCTGG...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGAAGACGTGCAGAACCTaGCAGGCCAGCACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TSTVPRRRAFPSAGLLAGKTCRT*QASTSG
Trigger: CCCGCTGGTGCTGGCCTGGCAGGTTCTGCACGTCTT...CCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CATCCCCTACAAGCCCCAAGGAACCTGAAAGTGCTGCTGGCAGCCGCCAGCATGGTCTGCAGCAGGAGCTaGGGCGCACGACCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: HPLQAPRNLKVLLAAASMVCSRS*GARPWH
Trigger: GTGCCAGGGTCGTGCGCCGCAGCTCCTGCTGCAGAC...CATGCTGGCGGCTGCCAGCAGCACTTTCAGGTTCCTTGGGGCTTGTAGGGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp CGGCTGCCCGACTCAGGTCCGCCCGACCAGGATCAGCCCCGCTCCTCCCCTCTTAGCGGGGAAGGGGACTaGGATGTCACACAATGCAAA +
Preference number: 4 (lower is better)
Translates to: RLPDSGPPDQDQPRSSPLSGEGD*DVTQCK
Trigger: TTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCT...AAGAGGGGAGGAGCGGGGCTGATCCTGGTCGGGCGGACCTGAGTCGGGCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp AGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTGGCGCCACCTGGTAGTTaGTGTAGCGCAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: STVPRRRAFPSAGLLAGLAPPGS*CSAGCG
Trigger: ACCGCATCCTGCGCTACACCAACTACCAGGTGGCGC...CAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCGGTGCACGAAGAGGTTaGCCAGGAAGGCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSGARRG*PGRPQA
Trigger: TGCCTGAGGCCTTCCTGGCCAACCTCTTCGTGCACC...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CAA 72 bp ACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTaGCTTGCAGGGCTGCAGCCCACTCCCATGACTTTG +
Preference number: 4 (lower is better)
Translates to: TVPRRRAFPSAG*LAGLQPTPMTL
Trigger: CAAAGTCATGGGAGTGGGCTGCAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCCTTCTCCCGGGAACCTaGCAACCCCAAGGTGTGAGA +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSLLPGT*QPQGVR
Trigger: TCTCACACCTTGGGGTTGTCAGGTTCCCGGGAGAAG...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp ACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGTCCAGGTTCTGGATGTaGTGCCAGGAGCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: TSTVPRRRAFPSAGLLAGSRFWM*CQEPRS
Trigger: GCTCCGAGGCTCCTGGCATCACATCCAGAACCTGGA...CCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTGAAGAGGTTGCAGACTaGGCGAAGCAGTTGGACCAG +
Preference number: 4 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLEEVAD*AKQLDQ
Trigger: CTGGTCCAACTGCTTCGCTCAGTCTGCAACCTCTTC...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGCGCCAGGCCGCGGCTaGGGAAAGCCGCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPAPGRG*GKPHCL
Trigger: GAGGCAGTGCGGCTTTCCTCAGCCGCGGCCTGGCGC...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp AGAGATGACCACCTCCCATCACCCCAAATTCCCACCACTGCTCCCATCGCTTCATGGCGACGGTGGCGGTaGCCCCGAGCGCGGTCATGG +
Preference number: 4 (lower is better)
Translates to: RDDHLPSPQIPTTAPIASWRRWR*PRARSW
Trigger: CCATGACCGCGCTCGGGGTCACCGCCACCGTCGCCA...TGAAGCGATGGGAGCAGTGGTGGGAATTTGGGGTGATGGGAGGTGGTCATCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp CAGCAGCGCGGGGTGTTTGGCCGAGTCCTCACCGCCTTCTCCCGGGAACCTGACGCTGGTGCAGGTAGATaGCATGGAGACTCATCTCGG +
Preference number: 4 (lower is better)
Translates to: QQRGVFGRVLTAFSREPDAGAGR*HGDSSR
Trigger: CCGAGATGAGTCTCCATGTCATCTACCTGCACCAGC...GTCAGGTTCCCGGGAGAAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCGTGTCTGTGGTCACCTaGAACCCTCCGGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSVSVVT*NPPGNR
Trigger: TCTGTTCCCCGGAGGGTTTCAGGTGACCACAGACAC...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGGCAAGGGCTGGGCCCTaGGCTTCTGGCTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATARAGP*ASGFLV
Trigger: CACCAGGAAGCCAGAAGCTCAGGGCCCAGCCCTTGC...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp TTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGCCCCTCTTGAGGTGGTaGCTTCTCACATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: FPFQFRESGCPTQVRPTRPLLRW*LLTSVQ
Trigger: CTGGACAGATGTGAGAAGGCACCACCTCAAGAGGGG...CCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGTGGCAACCAACGTCCTaGAGACCGTGCAGCGCATCC +
Preference number: 4 (lower is better)
Translates to: TSTVPRRRAFPSAGLLAGWQPTS*RPCSAS
Trigger: GGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCA...CCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCACGGAGGTGCACCGCGTaGTGTGCCTCGAGCGGGGCC +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPRRCTA*CASSGA
Trigger: GGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCG...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACAAGAGGCAGGTGTCATTaGAGGTTGAGCCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTRGRCH*RLSLCW
Trigger: CCAACACAGGCTCAACCTGCAATGACACCTGCCTCT...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp TCCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTGCGGGACTGCACCTCTaGCCAGGGAACCGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SNLLWLPKPGYLWEETALAGLHL*PGNRAQ
Trigger: CTGAGCTCGGTTCCCTGGGCAGAGGTGCAGTCCCGC...AAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp TTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGACTCGGCCCCAGAGGTaGCCAAGAAACTTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FPFQFRESGCPTQVRPTRTRPQR*PRNLEL
Trigger: CAGCTCTAAGTTTCTTGGGCACCTCTGGGGCCGAGT...CCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGGGTGCAGCACTCAGCTaGCAGGAGTGGGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRGAALS*QEWGPE
Trigger: CTCAGGGCCCCACTCCTGGCAGCTGAGTGCTGCACC...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGCCAGCCAGTCTGGGCTaGTCCCCCGTGCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: VTMATNVLQTVQRILATEPASLG*SPVQFS
Trigger: TGAGAACTGCACGGGGGAGCAGCCCAGACTGGCTGG...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGCTCCCTCCTTCCGGCTaGCACCCGATCCCAGCTTGC +
Preference number: 4 (lower is better)
Translates to: RGFWQERLHDIESKGEAGLPPSG*HPIPAC
Trigger: GCAAGCTGGGATCGGGTGGCAGCCGGAAGGAGGGAG...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTGAACTTGGGTCCTCCTTaGTCCACCCACCCTGCATGG +
Preference number: 4 (lower is better)
Translates to: STVPRRRAFPSAGLLAGLNLGPP*STHPAW
Trigger: CCATGCAGGGTGGGTGGAGCAAGGAGGACCCAAGTT...CAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGTCTACCGCGACGAGGTaGAGAACGCCCAGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATSTATR*RTPSSA
Trigger: CGCGCTGCTGGGCGTTCTGCACCTCGTCGCGGTAGA...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGAAGCGCGGGGTTGCTTaGAGGGCTGCAGCCCACTCC +
Preference number: 4 (lower is better)
Translates to: RGFWQERLHDIESKGEAGKRGVA*RAAAHS
Trigger: GGAGTGGGCTGCAGCCCTGCAAGCAACCCCGCGCTT...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTGCGGCGATGTTACCATaGCAACCAACGTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLAAMLP*QPTSCR
Trigger: TCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGC...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGGCAGCGCGGGGTGTTTaGCCGAGTCCTCACCGCCTT +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRAARGV*PSPHRL
Trigger: AAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGC...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTGAGCCCAGGAGAGTCCTaGGGGCACTGCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: PISCGCRSQGTCGRRRLLSPGES*GHCCEG
Trigger: TCCCTCACAGCAGTGCCCCCAGGACTCTCCTGGGCT...CAAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp TTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGAGGGTCACTTTGCTGTaGAACGGCCCAGGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: FPFQFRESGCPTQVRPTRRVTLL*NGPGLV
Trigger: TACCAGACCTGGGCCGTTCCACAGCAAAGTGACCCT...CCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp TTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGATCCTCTCAGCACACTaGGCTGAGGGTAGGATGGCA +
Preference number: 4 (lower is better)
Translates to: FPFQFRESGCPTQVRPTRILSAH*AEGRMA
Trigger: TGCCATCCTACCCTCAGCCCAGTGTGCTGAGAGGAT...CCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp AGCCGCCAGCATGACGAATCCACAGCCTTAAAGCCCACCTGCCTCACTGTCGCCGCGAAGAAAACGAGCTaGCGGGCCAGCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: SRQHDESTALKPTCLTVAAKKTS*RASSVR
Trigger: GCGCACGCTGCTGGCCCGCCAGCTCGTTTTCTTCGC...GGCGACAGTGAGGCAGGTGGGCTTTAAGGCTGTGGATTCGTCATGCTGGCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGACGTGCAGGACATCCTaGGGACGGAGCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VCLRRCYHGNQRPADRAATCRTS*GRSWLR
Trigger: CCGCAGCCAGCTCCGTCCTCAGGATGTCCTGCACGT...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CACCCTCCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCCCGTCTTTCCACTaGCAAGTCCCCATCCCCTAC +
Preference number: 4 (lower is better)
Translates to: HPPISCGCRSQGTCGRRRLPSFH*QVPIPY
Trigger: GTAGGGGATGGGGACTTGTCAGTGGAAAGACGGGAG...CCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGCCAGGAGTGGGGCCCTaGGGAGTCGTCTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRPGVGP*GVVSVS
Trigger: ACTGACTGAGACGACTCCTCAGGGCCCCACTCCTGG...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp AGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTGCCAGAGGACGCCACTTaGCCCTGCACTCTGAAAACA +
Preference number: 4 (lower is better)
Translates to: STVPRRRAFPSAGLLAGLPEDAT*PCTLKT
Trigger: TGTTTTCAGAGTGCAGGGTCAAGTGGCGTCCTCTGG...CAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCCCAGAGGACGCCACTTaGCCCTGCACTCTGAAAACA +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSPEDAT*PCTLKT
Trigger: TGTTTTCAGAGTGCAGGGTCAAGTGGCGTCCTCTGG...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp TTGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTGTGCAGGGTCTCTGTaGAAGCATTCTACACTCTCT +
Preference number: 4 (lower is better)
Translates to: LQERQLRGAVPWAFDPPGCAGSL*KHSTLS
Trigger: AGAGAGTGTAGAATGCTTTCACAGAGACCCTGCACA...GCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp TCGCTTCAAGTCGGACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCAGGCCCCCGCTCCGCTaGAGTGCCAAGAGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: SLQVGLQTNYLCRPFSLPRPPLR*SAKRRD
Trigger: GTCCCGCCTCTTGGCACTGCAGCGGAGCGGGGGCCT...GGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTCCGACTTGAAGCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCACGCCCCGCTGGTCGCTaGGCTTGTAGGCGTGCGGCA +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPRPAGR*ACRRAA
Trigger: TGCCGCACGCCTACAAGCGCAGCGACCAGCGGGGCG...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAAGACGTGCAGAACCTaGCAGGCCAGCACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVKTCRT*QASTSG
Trigger: CCCGCTGGTGCTGGCCTGGCAGGTTCTGCACGTCTT...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGATGGCGGTGAGCACGTaGTCCACGGCTAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVMAVST*STASTS
Trigger: GGACGTGCTAGCCGTGGAGCACGTGCTCACCGCCAT...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGATGGCGGTGAGCACGTaGTCCACGGCTAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRMAVST*STASTS
Trigger: GGACGTGCTAGCCGTGGAGCACGTGCTCACCGCCAT...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGGTCTGCAGCAGGAGCTaGGGCGCACGACCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRVCSRS*GARPWH
Trigger: GTGCCAGGGTCGTGCGCCGCAGCTCCTGCTGCAGAC...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp TCCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTGAGACCGCTCGGTACTaGAGCAGCTGCGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: SNLLWLPKPGYLWEETALETARY*SSCAIC
Trigger: GCAGATGGCGCAGCTGCTGCAGTACCGAGCGGTCTC...AAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGGAGACCGCTCGGTACTaGAGCAGCTGCGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRETARY*SSCAIC
Trigger: GCAGATGGCGCAGCTGCTGCAGTACCGAGCGGTCTC...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGGGGCGCCAGAGTGGATaGGCCAGGGAGAACCGCATC +
Preference number: 4 (lower is better)
Translates to: VCLRRCYHGNQRPADRAAGRQSG*ARENRI
Trigger: GATGCGGTTCTCCCTGGCGCATCCACTCTGGCGCCC...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCACTCGGCCCCAGAGGTaGCCAAGAAACTTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSTRPQR*PRNLEL
Trigger: CAGCTCTAAGTTTCTTGGGCACCTCTGGGGCCGAGT...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCCGCCAGCATGACGAATCCACAGCCTTAAAGCCCACCTGCCTCACTGTCGCCGGAGGCAGGAGAGGGTaGACGAAGAGGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SRQHDESTALKPTCLTVAGGRRG*TKRLAR
Trigger: CCTGGCCAACCTCTTCGTGCACCCTCTCCTGCCTCC...GGCGACAGTGAGGCAGGTGGGCTTTAAGGCTGTGGATTCGTCATGCTGGCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGGATCCCAGCTTGCCCTaGATCCTGGTGGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRDPSLP*ILVGPG
Trigger: GCCTGGACCCACCAGGATGCAGGGCAAGCTGGGATC...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CAGCAGCGCGGGGTGTTTGGCCGAGTCCTCACCGCCTTCTCCCGGGAACCTGACACTTTGGTGTTCGGCTaGCGATGCTCCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: QQRGVFGRVLTAFSREPDTLVFG*RCSQLD
Trigger: GTCAAGTTGGGAGCATCGGCAGCCGAACACCAAAGT...GTCAGGTTCCCGGGAGAAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGCCCAAAACGCTGGGCTaGCAGGCTGGGCGACGGTGG +
Preference number: 4 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRPKTLG*QAGRRW
Trigger: CCACCGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGG...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGCCCCTGAGAGCCGCCTaGCTTTCCCTTCCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: RGFWQERLHDIESKGEAGPLRAA*LSLPVP
Trigger: CGGAACTGGAAGGGAAAGCCAGGCGGCTCTCAGGGG...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGCCGTGCAGCGCATCCTaGCGACGGAGGGCGACATGG +
Preference number: 4 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQPCSAS*RRRATW
Trigger: CCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGG...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGGCTCCTCCCCGTGGATaGGTGAGTCTTGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATAPPRG*VSLGTP
Trigger: AGGGGTCCCAAGACTCACCCATCCACGGGGAGGAGC...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGGCTCCTCCCCGTGGATaGGTGAGTCTTGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRAPPRG*VSLGTP
Trigger: AGGGGTCCCAAGACTCACCCATCCACGGGGAGGAGC...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCAGGGTCACTTTGCTGTaGAACGGCCCAGGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSRVTLL*NGPGLV
Trigger: TACCAGACCTGGGCCGTTCCACAGCAAAGTGACCCT...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp TCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTGGCAAGCGCCACCTGGTAGTTaGTGTAGCGCAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: SPVAAEARVPVGGDGSWQAPPGS*CSAGCG
Trigger: ACCGCATCCTGCGCTACACCAACTACCAGGTGGCGC...TTGCCAAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp TCCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTTGCGGCGCACGACCCTaGCACTGCTCTTCCGGAATG +
Preference number: 4 (lower is better)
Translates to: SNLLWLPKPGYLWEETALCGARP*HCSSGM
Trigger: CATTCCGGAAGAGCAGTGCCAGGGTCGTGCGCCGCA...AAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGGGCCGCGAGCCGAGGTaGCACCCCAGGCAGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPGREPR*HPRQLH
Trigger: ATGCAGCTGCCTGGGGTGCCACCTCGGCTCGCGGCC...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCACAGAGCTGGGGTCCTaGGCAATTCGGGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSTELGS*AIREME
Trigger: CTCCATTTCCCGAATTGCCCAGGACCCCAGCTCTGT...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGCTGGGGACACAGAGCTaGGGTCCTGGGCAATTCGGG +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVLGTQS*GPGQFG
Trigger: CCCGAATTGCCCAGGACCCCAGCTCTGTGTCCCCAG...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGTGGGCCCTGAGCTTCTaGCTTCCTGGTGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: VTMATNVLQTVQRILATEWALSF*LPGAWY
Trigger: GTACCAGGCACCAGGAAGCCAGAAGCTCAGGGCCCA...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGGGCGACGGTGGCCTGTaGGGAGGCCCCACTAGCACT +
Preference number: 4 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQGDGGL*GGPTST
Trigger: AGTGCTAGTGGGGCCTCCCCACAGGCCACCGTCGCC...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATACAATGCAAAGGGCATaGAATTCTGAGTCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHTMQRA*NSESEA
Trigger: GGCTTCGGACTCAGAATTCCATGCCCTTTGCATTGT...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTAGGGACAGAGGGGTaGGGCTGGAAGGCAGGAAAT +
Preference number: 4 (lower is better)
Translates to: TSTVPRRRAFPSAGLLAGLGTEG*GWKAGN
Trigger: ATTTCCTGCCTTCCAGCCCCACCCCTCTGTCCCTAG...CCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CAA 72 bp TGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATGTTaGTCTGCGGCGATGTTACCATGGCAACCAACGTCC +
Preference number: 4 (lower is better)
Translates to: CTACCASSGATC*SAAMLPWQPTS
Trigger: GGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAACATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCACCCAGGTCCCCGGCATaGAGGAGGAGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPPRSPA*RRRRRW
Trigger: CCACCTCCTCCTCCTCCTTCATGCCGGGGACCTGGG...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGCTCCCCGTGGATGGGTaGGTCTTGGGACCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRLPVDG*VLGPLR
Trigger: CCTGAGGGGTCCCAAGACTCACCCATCCACGGGGAG...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGCCCTTCAGGGACATaGAGCAGGGGTTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVSPSGT*SRGCCS
Trigger: GGAGCAGCAACCCCTGCTTCATGTCCCTGAAGGGCT...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp TTGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCAGCTGTAGATCTTGGTaGAGAAACTGTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: LQERQLRGAVPWAFDPPGSCRSW*RNCPGS
Trigger: AGAACCTGGACAGTTTCTTCACCAAGATCTACAGCT...GCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp ACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGGAAGAGGTTGCAGACTaGGCGAAGCAGTTGGACCAG +
Preference number: 4 (lower is better)
Translates to: TSTVPRRRAFPSAGLLAGEEVAD*AKQLDQ
Trigger: CTGGTCCAACTGCTTCGCTCAGTCTGCAACCTCTTC...CCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCTCACAGGAGGCAAGCGCGGTCATGGCGGTaGGCACGTGCTCCACGGCTA +
Preference number: 4 (lower is better)
Translates to: DSKPTTYAVLSPSPHRRQARSWR*ARAPRL
Trigger: TAGCCGTGGAGCACGTGCTCACCGCCATGACCGCGC...TTGCCTCCTGTGAGGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp CCGCGCTTCCCTTCCCTCTGTAAATCAGGGCTGTGCAGGGTCTCTGTGAAAGCAGCAAGGGCTGGGCCCTaGGCTTCTGGCTTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PRFPSLCKSGLCRVSVKAARAGP*ASGFLV
Trigger: CACCAGGAAGCCAGAAGCTCAGGGCCCAGCCCTTGC...TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACAGAGGGAAGGGAAGCGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGAGCTGGCTGCGGAGGTaGACCGCGTGCTGTGCCTCG +
Preference number: 4 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPSWLRR*TACCAS
Trigger: CGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCT...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGGAGGACGGAGCTGGCTaGGGAGGTGCACCGCGTGCT +
Preference number: 4 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPEDGAG*GGAPRA
Trigger: AGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTC...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCACCCGCTCCGCTGCAGTaGCAAGAGGCGGGACTGCAC +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPPAPLQ*QEAGLH
Trigger: GTGCAGTCCCGCCTCTTGGCACTGCAGCGGAGCGGG...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ACCTGCCTCACTGTCGCCCTTCCATTTAGCTCGGCCTCATCCTTGACCTCTGTCTTGAAGTGGCGCAGCTaGAAGCGCGCCAGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: TCLTVALPFSSASSLTSVLKWRS*KRARRD
Trigger: GTCCCGCCTGGCGCGCTTGCAGCTGCGCCACTTCAA...GACAGAGGTCAAGGATGAGGCCGAGCTAAATGGAAGGGCGACAGTGAGGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCACGCGCGCGCAGCTCGTaGGGCAGCTCGTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPRARSS*GSSLKW
Trigger: CCACTTCAACGAGCTGCCGCACGAGCTGCGCGCGCG...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGGCACGACCCTGGCACTaGTCTTCCGGAATGAAAGAC +
Preference number: 4 (lower is better)
Translates to: TSTVPRRRAFPSAGLLAGARPWH*SSGMKD
Trigger: GTCTTTCATTCCGGAAGAGCAGTGCCAGGGTCGTGC...CCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGGGCACCCCAGGCAGCTaGATCTTGTTGTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVGTPGS*ILLYSA
Trigger: GGCCGAGTACAACAAGATGCAGCTGCCTGGGGTGCC...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ACCTGCCTCACTGTCGCCCTTCCATTTAGCTCGGCCTCATCCTTGACCTCTGTCGGACAGGATGGAGGCTaGAGCCTCACCCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: TCLTVALPFSSASSLTSVGQDGG*SLTPRL
Trigger: GAGCCGTGGGGTGAGGCTGCAGCCTCCATCCTGTCC...GACAGAGGTCAAGGATGAGGCCGAGCTAAATGGAAGGGCGACAGTGAGGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp TCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTGGCAAAGTCGTCTCAGTCAGTaGAAGAGGCCCGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SPVAAEARVPVGGDGSWQSRLSQ*KRPGQA
Trigger: AGCCTGACCGGGCCTCTTGCACTGACTGAGACGACT...TTGCCAAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp GACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCGGGGCCACATGACTCAAAGAAGAACTaGCCAAGGTGGATTCTTGAC +
Preference number: 4 (lower is better)
Translates to: DGAGCGGAPRAVPRAGPHDSKKN*PRWILD
Trigger: GTCAAGAATCCACCTTGGGCAGTTCTTCTTTGAGTC...ATGTGGCCCCGCTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CGGCTGCCCGACTCAGGTCCGCCCGACCAGGATCAGCCCCGCTCCTCCCCTCTTGACTCAAAGAAGAACTaGCCAAGGTGGATTCTTGAC +
Preference number: 4 (lower is better)
Translates to: RLPDSGPPDQDQPRSSPLDSKKN*PRWILD
Trigger: GTCAAGAATCCACCTTGGGCAGTTCTTCTTTGAGTC...AAGAGGGGAGGAGCGGGGCTGATCCTGGTCGGGCGGACCTGAGTCGGGCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTGACTTTGGTGTTCGGCTaGCGATGCTCCCAACTTGAC +
Preference number: 4 (lower is better)
Translates to: STVPRRRAFPSAGLLAGLTLVFG*RCSQLD
Trigger: GTCAAGTTGGGAGCATCGGCAGCCGAACACCAAAGT...CAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCAGCGGGGAAGGGGACTaGGATGTCACACAATGCAAA +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSSGEGD*DVTQCK
Trigger: TTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCT...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTGTCTGGCAGGAGCGGCTaGATGACATTGAGAGCAAAG +
Preference number: 4 (lower is better)
Translates to: STVPRRRAFPSAGLLAGLSGRSG*MTLRAK
Trigger: CTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGA...CAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGGAGGTGGCAGTGGCATaGGGAGGAGGGGCACCGATC +
Preference number: 4 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQEVAVA*GGGAPI
Trigger: GATCGGTGCCCCTCCTCCCCATGCCACTGCCACCTC...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGTGGATGGGTGAGTCTTaGGACCCCTCAGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: VTMATNVLQTVQRILATEWMGES*DPSGSQ
Trigger: CTGTGACCCTGAGGGGTCCCAAGACTCACCCATCCA...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CTGGCGACGGAGGGCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGATAAATTGTCCCAGCTaGAAGACATCCTCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: LATEGDMELDEAGDVIGVINCPS*KTSSSK
Trigger: CTTGCTGGAGGATGTCTTCCAGCTGGGACAATTTAT...CACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGGCGCCACCTGGTAGTTaGTGTAGCGCAGGATGCGGT +
Preference number: 4 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATAPPGS*CSAGCG
Trigger: ACCGCATCCTGCGCTACACCAACTACCAGGTGGCGC...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CTACAAGCCCCAAGGAACCTGAAAGTGCTGCTGGCAGCCGCCAGCATGACGAATGGCAGCTCGTTGAAGTaGCGCAGCTGCAAGCGCGCC +
Preference number: 4 (lower is better)
Translates to: LQAPRNLKVLLAAASMTNGSSLK*RSCKRA
Trigger: GGCGCGCTTGCAGCTGCGCCACTTCAACGAGCTGCC...ATTCGTCATGCTGGCGGCTGCCAGCAGCACTTTCAGGTTCCTTGGGGCTTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCTTAGAGCTGTGCCCTaGGGGGCGCCAGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: VCLRRCYHGNQRPADRAALRAVP*GAPEWM
Trigger: CATCCACTCTGGCGCCCCCCAGGGCACAGCTCTAAG...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GGTCCTGCCCAACTAAAGCACCTGGGCCTGTCATCTATGGGGCCTCTAACAATGCAAGGAGGCTGGCTGTaGCCGCAGCTGGACAGGGGG +
Preference number: 4 (lower is better)
Translates to: GPAQLKHLGLSSMGPLTMQGGWL*PQLDRG
Trigger: CCCCCTGTCCAGCTGCGGCCACAGCCAGCCTCCTTG...CATTGTTAGAGGCCCCATAGATGACAGGCCCAGGTGCTTTAGTTGGGCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp CTACAAGCCCCAAGGAACCTGAAAGTGCTGCTGGCAGCCGCCAGCATGACGAATTGGAGGCAAGGAGGCTaGCTGTGGCCGCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: LQAPRNLKVLLAAASMTNWRQGG*LWPQLD
Trigger: GTCCAGCTGCGGCCACAGCCAGCCTCCTTGCCTCCA...ATTCGTCATGCTGGCGGCTGCCAGCAGCACTTTCAGGTTCCTTGGGGCTTGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGTGGAGGCAAGGAGGCTaGCTGTGGCCGCAGCTGGAC +
Preference number: 4 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQWRQGG*LWPQLD
Trigger: GTCCAGCTGCGGCCACAGCCAGCCTCCTTGCCTCCA...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACACTTCTCCAGAAAGGTTaGAAGGATGGGAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTLLQKG*KDGSCC
Trigger: ACAACAGCTCCCATCCTTCCAACCTTTCTGGAGAAG...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGTGGCTTCCTGGTGCCTaGTACATAGTAGGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: DILRTELAAEVHRVLCLEWLPGA*YIVGVD
Trigger: GTCAACACCTACTATGTACCAGGCACCAGGAAGCCA...CTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTATGGGGTGCCCAGGGTaGTCTGTCAATCAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLMGCPG*SVNQKK
Trigger: CTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGGACACCAACAGCCCCTaGGAGCCGCCTGGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPDTNSP*EPPGFP
Trigger: GGGAAAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTC...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAACGTGCAGGACATCCTaGGGACGGAGCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPTCRTS*GRSWLR
Trigger: CCGCAGCCAGCTCCGTCCTCAGGATGTCCTGCACGT...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGCAAGGTGTGAGACCCTaGGGGCGCAATGGTAACGTG +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRQGVRP*GRNGNV
Trigger: CACGTTACCATTGCGCCCTCAGGGTCTCACACCTTG...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCTCACAGGAGGCAACTCCCCGTGGATGGGTaGGTCTTGGGACCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: DSKPTTYAVLSPSPHRRQLPVDG*VLGPLR
Trigger: CCTGAGGGGTCCCAAGACTCACCCATCCACGGGGAG...TTGCCTCCTGTGAGGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGCTCCCCGTGGATGGGTaGGTCTTGGGACCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPLPVDG*VLGPLR
Trigger: CCTGAGGGGTCCCAAGACTCACCCATCCACGGGGAG...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTGGAAGAGGTTGCAGACTaGGCGAAGCAGTTGGACCAG +
Preference number: 4 (lower is better)
Translates to: PISCGCRSQGTCGRRRLLEEVAD*AKQLDQ
Trigger: CTGGTCCAACTGCTTCGCTCAGTCTGCAACCTCTTC...CAAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCACGTGCGGCAGCTCGTTaGAGTGGCGCAGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPRAAAR*SGAAAS
Trigger: GCTTGCAGCTGCGCCACTTCAACGAGCTGCCGCACG...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGACTGCTCTTCCGGAATaGAAGACCTGGCGACGGTGG +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRTALPE*KTWRRW
Trigger: CCACCGTCGCCAGGTCTTTCATTCCGGAAGAGCAGT...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp TCCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTGTGTCTGTGGTCACCTaGAACCCTCCGGGGAACAGA +
Preference number: 4 (lower is better)
Translates to: SNLLWLPKPGYLWEETALVSVVT*NPPGNR
Trigger: TCTGTTCCCCGGAGGGTTTCAGGTGACCACAGACAC...AAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGTGTGCAGGGTCTCTGTaGAAGCATTCTACACTCTCT +
Preference number: 4 (lower is better)
Translates to: DILRTELAAEVHRVLCLECAGSL*KHSTLS
Trigger: AGAGAGTGTAGAATGCTTTCACAGAGACCCTGCACA...CTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CACCCTCCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGAGAGGCAGGTGTCATTaGAGGTTGAGCCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: HPPISCGCRSQGTCGRRRRGRCH*RLSLCW
Trigger: CCAACACAGGCTCAACCTGCAATGACACCTGCCTCT...CCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGAGGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGCCCGCTCCGCTGCAGTaGCAAGAGGCGGGACTGCAC +
Preference number: 4 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKPAPLQ*QEAGLH
Trigger: GTGCAGTCCCGCCTCTTGGCACTGCAGCGGAGCGGG...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCTCACAGGAGGCAATCCAGCAGCAGCACTGTaGGCCCCCAGCGCGCTGCTA +
Preference number: 4 (lower is better)
Translates to: TPNQLPMPSFLPPLTGGNPAAAL*APSALL
Trigger: TAGCAGCGCGCTGGGGGCGCACAGTGCTGCTGCTGG...ATTGCCTCCTGTGAGGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp CTACAAGCCCCAAGGAACCTGAAAGTGCTGCTGGCAGCCGCCAGCATGACGAATAAGACGTGCAGAACCTaGCAGGCCAGCACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LQAPRNLKVLLAAASMTNKTCRT*QASTSG
Trigger: CCCGCTGGTGCTGGCCTGGCAGGTTCTGCACGTCTT...ATTCGTCATGCTGGCGGCTGCCAGCAGCACTTTCAGGTTCCTTGGGGCTTGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp CCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTCCAAACCAACTACCGCGCGCGCAGCTCGTaGGGCAGCTCGTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PKFPPLLPSLQVGLQTNYRARSS*GSSLKW
Trigger: CCACTTCAACGAGCTGCCGCACGAGCTGCGCGCGCG...GTAGTTGGTTTGGAGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCAGCGCGGCGAAGAGTaGACCCGCGAAGAAAACGAG +
Preference number: 4 (lower is better)
Translates to: VCLRRCYHGNQRPADRAAQRGEE*TREENE
Trigger: CTCGTTTTCTTCGCGGGTGCACTCTTCGCCGCGCTG...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CTGTGGGAGGAGACGGCTCTTGGCAAGCAGTCCAGGGGTCTAGATTCCAGAGATATGGCGGTGAGCACGTaGTCCACGGCTAGCACGTCC +
Preference number: 4 (lower is better)
Translates to: LWEETALGKQSRGLDSRDMAVST*STASTS
Trigger: GGACGTGCTAGCCGTGGAGCACGTGCTCACCGCCAT...ATCTCTGGAATCTAGACCCCTGGACTGCTTGCCAAGAGCCGTCTCCTCCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGGATCGAGAAGGCAGGTaGAGCACTCAGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RGFWQERLHDIESKGEAGDREGR*STQLPG
Trigger: TCCTGGCAGCTGAGTGCTGCACCTGCCTTCTCGATC...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CCGCGCTTCCCTTCCCTCTGTAAATCAGGGCTGTGCAGGGTCTCTGTGAAAGCAGATCCCAGCTTGCCCTaGATCCTGGTGGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PRFPSLCKSGLCRVSVKADPSLP*ILVGPG
Trigger: GCCTGGACCCACCAGGATGCAGGGCAAGCTGGGATC...TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACAGAGGGAAGGGAAGCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CCGCGCTTCCCTTCCCTCTGTAAATCAGGGCTGTGCAGGGTCTCTGTGAAAGCACACCCGATCCCAGCTTaGCCTGCATCCTGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: PRFPSLCKSGLCRVSVKAHPIPA*PASWWV
Trigger: GACCCACCAGGATGCAGGGCAAGCTGGGATCGGGTG...TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACAGAGGGAAGGGAAGCGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGCACCCGATCCCAGCTTaGCCTGCATCCTGGTGGGTC +
Preference number: 4 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQHPIPA*PASWWV
Trigger: GACCCACCAGGATGCAGGGCAAGCTGGGATCGGGTG...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGCCGTGCAGCGCATCCTaGCGACGGAGGGCGACATGG +
Preference number: 4 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKPCSAS*RRRATW
Trigger: CCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGG...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCTCACAGGAGGCAAGAGGTGGCAGTGGCATaGGGAGGAGGGGCACCGATC +
Preference number: 4 (lower is better)
Translates to: DSKPTTYAVLSPSPHRRQEVAVA*GGGAPI
Trigger: GATCGGTGCCCCTCCTCCCCATGCCACTGCCACCTC...TTGCCTCCTGTGAGGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGAGCCCAGGAGAGTCCTaGGGGCACTGCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQSPGES*GHCCEG
Trigger: TCCCTCACAGCAGTGCCCCCAGGACTCTCCTGGGCT...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp TCCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTTGGATGGGTGAGTCTTaGGACCCCTCAGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: SNLLWLPKPGYLWEETALWMGES*DPSGSQ
Trigger: CTGTGACCCTGAGGGGTCCCAAGACTCACCCATCCA...AAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACAATAAATTGTCCCAGCTaGAAGACATCCTCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTINCPS*KTSSSK
Trigger: CTTGCTGGAGGATGTCTTCCAGCTGGGACAATTTAT...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGGCGAAGAAAACGAGCTaGCGGGCCAGCAGCGTGCGC +
Preference number: 4 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPAKKTS*RASSVR
Trigger: GCGCACGCTGCTGGCCCGCCAGCTCGTTTTCTTCGC...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGACAGAGCTGGGGTCCTaGGCAATTCGGGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: VTMATNVLQTVQRILATETELGS*AIREME
Trigger: CTCCATTTCCCGAATTGCCCAGGACCCCAGCTCTGT...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGGGCAGAAGCAAGTTCTaGGAGCTGGGCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATGRSKF*ELGQLL
Trigger: CAGAAGCTGGCCCAGCTCCCAGAACTTGCTTCTGCC...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGCCTTCTGGGTGTCTGTaGTCACCTGAAACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVPSGCL*SPETLR
Trigger: CCGGAGGGTTTCAGGTGACCACAGACACCCAGAAGG...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CCGCGCTTCCCTTCCCTCTGTAAATCAGGGCTGTGCAGGGTCTCTGTGAAAGCAGGTTTCCAGCCAGTCTaGGCTGCTCCCCCGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PRFPSLCKSGLCRVSVKAGFQPV*AAPPCS
Trigger: ACTGCACGGGGGAGCAGCCCAGACTGGCTGGAAACC...TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACAGAGGGAAGGGAAGCGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGAAGAACTGCCCAAGGTaGATTCTTGACTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: DILRTELAAEVHRVLCLEKNCPR*ILDCAR
Trigger: TCTGGCACAGTCAAGAATCCACCTTGGGCAGTTCTT...CTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGGAGATGGGAAGAACTTaGGTCCTCCTTGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: VTMATNVLQTVQRILATEEMGRT*VLLAPP
Trigger: GGGTGGAGCAAGGAGGACCCAAGTTCTTCCCATCTC...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGTTCAGCCCAAAACGCTaGGCTGCCAGGCTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRFSPKR*AARLGD
Trigger: GTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAA...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CAA 72 bp GGGTTGCTTGCAGGGCTGCAGCCCACTCCCATGACTTaGGTGTTCGGCTGCCGATGCTCCCAACTTGACCAT +
Preference number: 4 (lower is better)
Translates to: GLLAGLQPTPMT*VFGCRCSQLDH
Trigger: ATGGTCAAGTTGGGAGCATCGGCAGCCGAACACCAAAGTCATGGGAGTGGGCTGCAGCCCTGCAAGCAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGGACAACCCCAAGGTGTaGGACCCTGAGGGCGCAATG +
Preference number: 4 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQDNPKV*DPEGAM
Trigger: CATTGCGCCCTCAGGGTCTCACACCTTGGGGTTGTC...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGGACAACCCCAAGGTGTaGGACCCTGAGGGCGCAATG +
Preference number: 4 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRDNPKV*DPEGAM
Trigger: CATTGCGCCCTCAGGGTCTCACACCTTGGGGTTGTC...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CACCTCCCATCACCCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTAGCCCTTCAGGGACATaGAGCAGGGGTTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HLPSPQIPTTAPIASSRTSPSGT*SRGCCS
Trigger: GGAGCAGCAACCCCTGCTTCATGTCCCTGAAGGGCT...AGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGGGTGATGGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGGGATGTCCCAGTAGCTaGAGAGGTTGCAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVGCPSS*RGCRLS
Trigger: GCTCAGTCTGCAACCTCTTCAGCTACTGGGACATCC...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp TTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTCCAAACCAACTACCTATGCCGTGCGGCAGCTCGTTaGAGTGGCGCAGCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: FPPLLPSLQVGLQTNYLCRAAAR*SGAAAS
Trigger: GCTTGCAGCTGCGCCACTTCAACGAGCTGCCGCACG...GCATAGGTAGTTGGTTTGGAGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp GGGAGCCACACCCACTTCCTGGGACATCACACCCGTACTGAAGTCCAAAAACATCCTCGTCGTAGACGGTaGGCACAAGCAGCGCGGCGA +
Preference number: 4 (lower is better)
Translates to: GSHTHFLGHHTRTEVQKHPRRRR*AQAARR
Trigger: TCGCCGCGCTGCTTGTGCTCACCGTCTACGACGAGG...ATGTTTTTGGACTTCAGTACGGGTGTGATGTCCCAGGAAGTGGGTGTGGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp TCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTGGCAATCTAGATTCCAGAGATaGCCACCTCCCATCACCCCA +
Preference number: 4 (lower is better)
Translates to: SPVAAEARVPVGGDGSWQSRFQR*PPPITP
Trigger: TGGGGTGATGGGAGGTGGTCATCTCTGGAATCTAGA...TTGCCAAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp CTGTCCCCCACCTTGAGGAAACTCGAGGACTTCTTCCCAGGCAGCTGCTCCAGGTGGCAGCCGCCAGCATaGCGAATCCACAGCCTTAAA +
Preference number: 4 (lower is better)
Translates to: LSPTLRKLEDFFPGSCSRWQPPA*RIHSLK
Trigger: TTTAAGGCTGTGGATTCGTCATGCTGGCGGCTGCCA...CCTGGAGCAGCTGCCTGGGAAGAAGTCCTCGAGTTTCCTCAAGGTGGGGGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGACAAGGTGTTCATATTaGGCATGGGGTGCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: VTMATNVLQTVQRILATETRCSY*AWGAQG
Trigger: ACCCTGGGCACCCCATGCTCAATATGAACACCTTGT...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGCCCCTCTTGAGGTGGTaGCTTCTCACATCTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RGFWQERLHDIESKGEAGPLLRW*LLTSVQ
Trigger: CTGGACAGATGTGAGAAGGCACCACCTCAAGAGGGG...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGGGCCACATGTTTGTCTaGGGCGATGTTACCATGGCA +
Preference number: 4 (lower is better)
Translates to: VTMATNVLQTVQRILATEGHMFV*GDVTMA
Trigger: TGCCATGGTAACATCGCCGCAGACAAACATGTGGCC...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGCATCCTCCAGCAAGATaGAGGCAAAGCCATTCCGCT +
Preference number: 4 (lower is better)
Translates to: VTMATNVLQTVQRILATEHPPAR*RQSHSA
Trigger: AGCGGAATGGCTTTGCCTGCATCTTGCTGGAGGATG...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGGCGGGACTGCACCTCTaGCCAGGGAACCGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKAGLHL*PGNRAQ
Trigger: CTGAGCTCGGTTCCCTGGGCAGAGGTGCAGTCCCGC...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CTGTGGGAGGAGACGGCTCTTGGCAAGCAGTCCAGGGGTCTAGATTCCAGAGATCAGCGCGGCGAAGAGTaGACCCGCGAAGAAAACGAG +
Preference number: 4 (lower is better)
Translates to: LWEETALGKQSRGLDSRDQRGEE*TREENE
Trigger: CTCGTTTTCTTCGCGGGTGCACTCTTCGCCGCGCTG...ATCTCTGGAATCTAGACCCCTGGACTGCTTGCCAAGAGCCGTCTCCTCCCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGTTGCTCCACCCACCCTaGATGGTGAGAATGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RGFWQERLHDIESKGEAGLLHPP*MVRMVE
Trigger: CTCCACCATTCTCACCATGCAGGGTGGGTGGAGCAA...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGCCCCACTAGCACTGTaGCCCGGAGAAGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPAPLAL*PGEEPS
Trigger: GGAAGGCTCTTCTCCGGGGCACAGTGCTAGTGGGGC...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGCCCCTGAGAGCCGCCTaGCTTTCCCTTCCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPPLRAA*LSLPVP
Trigger: CGGAACTGGAAGGGAAAGCCAGGCGGCTCTCAGGGG...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGGGGACAGAGAGAAGATaGAGATCCTCCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: VCLRRCYHGNQRPADRAAGTERR*RSSLPQ
Trigger: CTGGGGGAGGGAGGATCTCCATCTTCTCTCTGTCCC...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CACCTCCCATCACCCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTTGCTGCTCCTCCCCGTaGATGGGTGAGTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: HLPSPQIPTTAPIASSRTCCSSP*MGESWD
Trigger: GTCCCAAGACTCACCCATCCACGGGGAGGAGCAGCA...AGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGGGTGATGGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp CCGCGCTTCCCTTCCCTCTGTAAATCAGGGCTGTGCAGGGTCTCTGTGAAAGCATGCTGCTCCTCCCCGTaGATGGGTGAGTCTTGGGAC +
Preference number: 4 (lower is better)
Translates to: PRFPSLCKSGLCRVSVKACCSSP*MGESWD
Trigger: GTCCCAAGACTCACCCATCCACGGGGAGGAGCAGCA...TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACAGAGGGAAGGGAAGCGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp TCCAATCTCCTGTGGCTGCCGAAGCCAGGGTACCTGTGGGAGGAGACGGCTCTTATCCTCTCAGCACACTaGGCTGAGGGTAGGATGGCA +
Preference number: 4 (lower is better)
Translates to: SNLLWLPKPGYLWEETALILSAH*AEGRMA
Trigger: TGCCATCCTACCCTCAGCCCAGTGTGCTGAGAGGAT...AAGAGCCGTCTCCTCCCACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp AGCCGCCAGCATGACGAATCCACAGCCTTAAAGCCCACCTGCCTCACTGTCGCCAGATTCCGGGCCTTCTaGGTTCCCCACTGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: SRQHDESTALKPTCLTVARFRAF*VPHCCL
Trigger: CAGACAACAGTGGGGAACCCAGAAGGCCCGGAATCT...GGCGACAGTGAGGCAGGTGGGCTTTAAGGCTGTGGATTCGTCATGCTGGCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp ACCTGCCTCACTGTCGCCCTTCCATTTAGCTCGGCCTCATCCTTGACCTCTGTCAAGCCAGGGTACCTGTaGGAGGAGACGGCTCTTGGC +
Preference number: 4 (lower is better)
Translates to: TCLTVALPFSSASSLTSVKPGYL*EETALG
Trigger: GCCAAGAGCCGTCTCCTCCCACAGGTACCCTGGCTT...GACAGAGGTCAAGGATGAGGCCGAGCTAAATGGAAGGGCGACAGTGAGGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCACTCAGCTGCCAGGAGTaGGGCCCTGAGGAGTCGTCT +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPLSCQE*GPEESS
Trigger: AGACGACTCCTCAGGGCCCCACTCCTGGCAGCTGAG...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCAAGAACTGCCCAAGGTaGATTCTTGACTGTGCCAGA +
Preference number: 4 (lower is better)
Translates to: ATWSWTRPATSSACQSFSKNCPR*ILDCAR
Trigger: TCTGGCACAGTCAAGAATCCACCTTGGGCAGTTCTT...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGGAGATGGGAAGAACTTaGGTCCTCCTTGCTCCACCC +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVEMGRT*VLLAPP
Trigger: GGGTGGAGCAAGGAGGACCCAAGTTCTTCCCATCTC...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GGTCCTGCCCAACTAAAGCACCTGGGCCTGTCATCTATGGGGCCTCTAACAATGTCCAGGTTCTGGATGTaGTGCCAGGAGCCTCGGAGC +
Preference number: 4 (lower is better)
Translates to: GPAQLKHLGLSSMGPLTMSRFWM*CQEPRS
Trigger: GCTCCGAGGCTCCTGGCATCACATCCAGAACCTGGA...CATTGTTAGAGGCCCCATAGATGACAGGCCCAGGTGCTTTAGTTGGGCAGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp ATGGGGCCTCTAACAATGACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCGCGAGGTGCAGTTGCTaGGCACCCCCGGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: MGPLTMTPCVFLLHPPISARCSC*APPGWR
Trigger: CCTCCACCCCGGGGGTGCTCAGCAACTGCACCTCGC...GGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCATTGTTAGAGGCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp CTCCCATCGCTTCAAGTCGGACTCCAAACCAACTACCTATGCCGTCCTTTCTCCGGGCGAGTTCCTCACTaGCTCCCAGGTCCTGCCCAA +
Preference number: 4 (lower is better)
Translates to: LPSLQVGLQTNYLCRPFSGRVPH*LPGPAQ
Trigger: TTGGGCAGGACCTGGGAGTCAGTGAGGAACTCGCCC...GGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTCCGACTTGAAGCGATGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp TCGCTTCAAGTCGGACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCAAGCCCCAAGGAACCTaGAAGTGCTGCTGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SLQVGLQTNYLCRPFSLPKPQGT*KCCWQP
Trigger: CGGCTGCCAGCAGCACTTTCAGGTTCCTTGGGGCTT...GGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTCCGACTTGAAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGCCAGGAGTGGGGCCCTaGGGAGTCGTCTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKPGVGP*GVVSVS
Trigger: ACTGACTGAGACGACTCCTCAGGGCCCCACTCCTGG...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGACAAGGTGTTCATATTaGGCATGGGGTGCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRTRCSY*AWGAQG
Trigger: ACCCTGGGCACCCCATGCTCAATATGAACACCTTGT...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGAGAGGCAGGTGTCATTaGAGGTTGAGCCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RGFWQERLHDIESKGEAGRGRCH*RLSLCW
Trigger: CCAACACAGGCTCAACCTGCAATGACACCTGCCTCT...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CATCCCCTACAAGCCCCAAGGAACCTGAAAGTGCTGCTGGCAGCCGCCAGCATGCATCCTCCAGCAAGATaGAGGCAAAGCCATTCCGCT +
Preference number: 4 (lower is better)
Translates to: HPLQAPRNLKVLLAAASMHPPAR*RQSHSA
Trigger: AGCGGAATGGCTTTGCCTGCATCTTGCTGGAGGATG...CATGCTGGCGGCTGCCAGCAGCACTTTCAGGTTCCTTGGGGCTTGTAGGGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGTGGTGTAGCGCAGGATaGGGTGGTGGATGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRWCSAG*GGGCPA
Trigger: AGCTGGACATCCACCACCGCATCCTGCGCTACACCA...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGGCACGACCCTGGCACTaGTCTTCCGGAATGAAAGAC +
Preference number: 4 (lower is better)
Translates to: VCLRRCYHGNQRPADRAAARPWH*SSGMKD
Trigger: GTCTTTCATTCCGGAAGAGCAGTGCCAGGGTCGTGC...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CACCTCCCATCACCCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTGCCTTAAAGCCCACCTaGCTCACTGTCGCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: HLPSPQIPTTAPIASSRTALKPT*LTVALP
Trigger: TGGAAGGGCGACAGTGAGGCAGGTGGGCTTTAAGGC...AGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGGGTGATGGGAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCATGGGCTGCTCCCCCGTaGAGTTCTCAGGCTCGTGAT +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPWAAPP*SSQARD
Trigger: ATCACGAGCCTGAGAACTGCACGGGGGAGCAGCCCA...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCTGTGGCTGCCGAAGCCAGGCTCCTCCCCGTGGATaGGTGAGTCTTGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: TPCVFLLHPPISCGCRSQAPPRG*VSLGTP
Trigger: AGGGGTCCCAAGACTCACCCATCCACGGGGAGGAGC...CTGGCTTCGGCAGCCACAGGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGTGCGGCGCACGACCCTaGCACTGCTCTTCCGGAATG +
Preference number: 4 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKCGARP*HCSSGM
Trigger: CATTCCGGAAGAGCAGTGCCAGGGTCGTGCGCCGCA...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CTGTGGGAGGAGACGGCTCTTGGCAAGCAGTCCAGGGGTCTAGATTCCAGAGATGGGCAATTCGGGAAATaGAGGCAAGGAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LWEETALGKQSRGLDSRDGQFGK*RQGGWL
Trigger: CAGCCAGCCTCCTTGCCTCCATTTCCCGAATTGCCC...ATCTCTGGAATCTAGACCCCTGGACTGCTTGCCAAGAGCCGTCTCCTCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp CCGCGCTTCCCTTCCCTCTGTAAATCAGGGCTGTGCAGGGTCTCTGTGAAAGCAGGCAGAAGCAAGTTCTaGGAGCTGGGCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PRFPSLCKSGLCRVSVKAGRSKF*ELGQLL
Trigger: CAGAAGCTGGCCCAGCTCCCAGAACTTGCTTCTGCC...TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACAGAGGGAAGGGAAGCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CATCACCCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTCCAAACCGGAGGAGACGGCTCTTaGCAAGCAGTCCAGGGGTCT +
Preference number: 4 (lower is better)
Translates to: HHPKFPPLLPSLQVGLQTGGDGS*QAVQGS
Trigger: AGACCCCTGGACTGCTTGCCAAGAGCCGTCTCCTCC...GGTTTGGAGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGGGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp TCGCTTCAAGTCGGACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCCCCTCCAATCTCCTGTaGCTGCCGAAGCCAGGGTAC +
Preference number: 4 (lower is better)
Translates to: SLQVGLQTNYLCRPFSLPPSNLL*LPKPGY
Trigger: GTACCCTGGCTTCGGCAGCCACAGGAGATTGGAGGG...GGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTCCGACTTGAAGCGA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp ACCTGCCTCACTGTCGCCCTTCCATTTAGCTCGGCCTCATCCTTGACCTCTGTCGCCACACCCACTTCCTaGGACATCACACCCGTACTG +
Preference number: 4 (lower is better)
Translates to: TCLTVALPFSSASSLTSVATPTS*DITPVL
Trigger: CAGTACGGGTGTGATGTCCCAGGAAGTGGGTGTGGC...GACAGAGGTCAAGGATGAGGCCGAGCTAAATGGAAGGGCGACAGTGAGGCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGGAGCTTCTGGCTTCCTaGTGCCTGGTACATAGTAGG +
Preference number: 4 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATELLAS*CLVHSR
Trigger: CCTACTATGTACCAGGCACCAGGAAGCCAGAAGCTC...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGTTCAGCCCAAAACGCTaGGCTGCCAGGCTGGGCGAC +
Preference number: 4 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKFSPKR*AARLGD
Trigger: GTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAA...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp AGAGATGACCACCTCCCATCACCCCAAATTCCCACCACTGCTCCCATCGCTTCAACTGCTCTTCCGGAATaGAAGACCTGGCGACGGTGG +
Preference number: 4 (lower is better)
Translates to: RDDHLPSPQIPTTAPIASTALPE*KTWRRW
Trigger: CCACCGTCGCCAGGTCTTTCATTCCGGAAGAGCAGT...TGAAGCGATGGGAGCAGTGGTGGGAATTTGGGGTGATGGGAGGTGGTCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAACTGCTCTTCCGGAATaGAAGACCTGGCGACGGTGG +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPTALPE*KTWRRW
Trigger: CCACCGTCGCCAGGTCTTTCATTCCGGAAGAGCAGT...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CTGTGGGAGGAGACGGCTCTTGGCAAGCAGTCCAGGGGTCTAGATTCCAGAGATGCTGGTGCAGGTAGATaGCATGGAGACTCATCTCGG +
Preference number: 4 (lower is better)
Translates to: LWEETALGKQSRGLDSRDAGAGR*HGDSSR
Trigger: CCGAGATGAGTCTCCATGTCATCTACCTGCACCAGC...ATCTCTGGAATCTAGACCCCTGGACTGCTTGCCAAGAGCCGTCTCCTCCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCACCGATGCTCCCAACTTaGCCATCTCTACCGCGACGA +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPPMLPT*PSLPRR
Trigger: TCGTCGCGGTAGAGATGGTCAAGTTGGGAGCATCGG...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGCAAAGTCCACAAAGCTaGAAAGACGCTCATGAGACC +
Preference number: 4 (lower is better)
Translates to: VTMATNVLQTVQRILATEQSPQS*KDAHET
Trigger: GGTCTCATGAGCGTCTTTTCAGCTTTGTGGACTTTG...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGGGCCACATGTTTGTCTaGGGCGATGTTACCATGGCA +
Preference number: 4 (lower is better)
Translates to: VCLRRCYHGNQRPADRAAGHMFV*GDVTMA
Trigger: TGCCATGGTAACATCGCCGCAGACAAACATGTGGCC...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCTCACAGGAGGCAATGGTGTAGCGCAGGATaGGGTGGTGGATGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: DSKPTTYAVLSPSPHRRQWCSAG*GGGCPA
Trigger: AGCTGGACATCCACCACCGCATCCTGCGCTACACCA...TTGCCTCCTGTGAGGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp AATGACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCTGTGGCTGCCGAAGGGGCGCCAGAGTGGATaGGCCAGGGAGAACCGCATC +
Preference number: 4 (lower is better)
Translates to: NDSLCFSTPPSNLLWLPKGRQSG*ARENRI
Trigger: GATGCGGTTCTCCCTGGCGCATCCACTCTGGCGCCC...CTTCGGCAGCCACAGGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp CTCCCATCGCTTCAAGTCGGACTCCAAACCAACTACCTATGCCGTCCTTTCTCCGGCACCCCAGGCAGCTaGATCTTGTTGTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: LPSLQVGLQTNYLCRPFSGTPGS*ILLYSA
Trigger: GGCCGAGTACAACAAGATGCAGCTGCCTGGGGTGCC...GGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTCCGACTTGAAGCGATGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAAGTCGTCTCAGTCAGTaGAAGAGGCCCGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPSRLSQ*KRPGQA
Trigger: AGCCTGACCGGGCCTCTTGCACTGACTGAGACGACT...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp TCGCTTCAAGTCGGACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCCTGACTCCCAGGTCCTaGCCAACTAAAGCACCTGGG +
Preference number: 4 (lower is better)
Translates to: SLQVGLQTNYLCRPFSLPLTPRS*PTKAPG
Trigger: CCCAGGTGCTTTAGTTGGGCAGGACCTGGGAGTCAG...GGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTCCGACTTGAAGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGATCGAGAAGGCAGGTaGAGCACTCAGCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPDREGR*STQLPG
Trigger: TCCTGGCAGCTGAGTGCTGCACCTGCCTTCTCGATC...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGGTGTTCGGCTGCCGATaGTCCCAACTTGACCATCTC +
Preference number: 4 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQVFGCR*SQLDHL
Trigger: GAGATGGTCAAGTTGGGAGCATCGGCAGCCGAACAC...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGGCGGCGATGTTACCATaGCAACCAACGTCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRAAMLP*QPTSCR
Trigger: TCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGC...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ATGGGGCCTCTAACAATGACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCACTGCTGTGAGGGAGTaGGGGTTGCCGGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: MGPLTMTPCVFLLHPPISTAVRE*GLPGPG
Trigger: CCCTGGCCCCGGCAACCCCCACTCCCTCACAGCAGT...GGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCATTGTTAGAGGCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp CCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTCCAAACCAACTACGGTGCACGAAGAGGTTaGCCAGGAAGGCCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: PKFPPLLPSLQVGLQTNYGARRG*PGRPQA
Trigger: TGCCTGAGGCCTTCCTGGCCAACCTCTTCGTGCACC...GTAGTTGGTTTGGAGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGGGGCAATTCGGGAAATaGAGGCAAGGAGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPGQFGK*RQGGWL
Trigger: CAGCCAGCCTCCTTGCCTCCATTTCCCGAATTGCCC...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGAGATTCCGGGCCTTCTaGGTTCCCCACTGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQRFRAF*VPHCCL
Trigger: CAGACAACAGTGGGGAACCCAGAAGGCCCGGAATCT...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGAGATTCCGGGCCTTCTaGGTTCCCCACTGTTGTCTG +
Preference number: 4 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRRFRAF*VPHCCL
Trigger: CAGACAACAGTGGGGAACCCAGAAGGCCCGGAATCT...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGTGCACTCTGAAAACATaGTTTCCAGCCAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATCTLKT*FPASLG
Trigger: GCCCAGACTGGCTGGAAACCATGTTTTCAGAGTGCA...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGGAGCTTCTGGCTTCCTaGTGCCTGGTACATAGTAGG +
Preference number: 4 (lower is better)
Translates to: VCLRRCYHGNQRPADRAAELLAS*CLVHSR
Trigger: CCTACTATGTACCAGGCACCAGGAAGCCAGAAGCTC...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
3UTR CAA 72 bp CTCACTGTCGCCCTTCCATTTAGCTCGGCCTCATCCTaGACCTCTGTCCCCCACCTTGAGGAAACTCGAGGA +
Preference number: 4 (lower is better)
Translates to: LTVALPFSSASS*TSVPHLEETRG
Trigger: TCCTCGAGTTTCCTCAAGGTGGGGGACAGAGGTCAAGGATGAGGCCGAGCTAAATGGAAGGGCGACAGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp AGAGATGACCACCTCCCATCACCCCAAATTCCCACCACTGCTCCCATCGCTTCAGGATGTCCCAGTAGCTaGAGAGGTTGCAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: RDDHLPSPQIPTTAPIASGCPSS*RGCRLS
Trigger: GCTCAGTCTGCAACCTCTTCAGCTACTGGGACATCC...TGAAGCGATGGGAGCAGTGGTGGGAATTTGGGGTGATGGGAGGTGGTCATCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGGATGTCCCAGTAGCTaGAGAGGTTGCAGACTGAGC +
Preference number: 4 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPGCPSS*RGCRLS
Trigger: GCTCAGTCTGCAACCTCTTCAGCTACTGGGACATCC...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGGCTGGTGCAGGTAGATaGCATGGAGACTCATCTCGG +
Preference number: 4 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPAGAGR*HGDSSR
Trigger: CCGAGATGAGTCTCCATGTCATCTACCTGCACCAGC...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GGTCCTGCCCAACTAAAGCACCTGGGCCTGTCATCTATGGGGCCTCTAACAATGCTCTGTCCCCCACCTTaGGGAAACTCGAGGACTTCT +
Preference number: 4 (lower is better)
Translates to: GPAQLKHLGLSSMGPLTMLCPPP*GNSRTS
Trigger: AGAAGTCCTCGAGTTTCCTCAAGGTGGGGGACAGAG...CATTGTTAGAGGCCCCATAGATGACAGGCCCAGGTGCTTTAGTTGGGCAGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGAAGGGCATGGAATTCTaGGTCCGAAGCCGCGCATTC +
Preference number: 4 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPKGMEF*VRSRAF
Trigger: GAATGCGCGGCTTCGGACTCAGAATTCCATGCCCTT...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGCTGAAAAGACGCTCATaGGACCAAGGGGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKLKRRS*DQGEGR
Trigger: CCTGCCCTCCCCTTGGTCTCATGAGCGTCTTTTCAG...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGCATCCTCCAGCAAGATaGAGGCAAAGCCATTCCGCT +
Preference number: 4 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQHPPAR*RQSHSA
Trigger: AGCGGAATGGCTTTGCCTGCATCTTGCTGGAGGATG...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GGTCCTGCCCAACTAAAGCACCTGGGCCTGTCATCTATGGGGCCTCTAACAATGACTCGGCCCCAGAGGTaGCCAAGAAACTTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GPAQLKHLGLSSMGPLTMTRPQR*PRNLEL
Trigger: CAGCTCTAAGTTTCTTGGGCACCTCTGGGGCCGAGT...CATTGTTAGAGGCCCCATAGATGACAGGCCCAGGTGCTTTAGTTGGGCAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp CTGTGGGAGGAGACGGCTCTTGGCAAGCAGTCCAGGGGTCTAGATTCCAGAGATCAAACCAACTACCTATaGCGTCCTTTCTCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: LWEETALGKQSRGLDSRDQTNYL*RPFSLP
Trigger: GGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTG...ATCTCTGGAATCTAGACCCCTGGACTGCTTGCCAAGAGCCGTCTCCTCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp ACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCTCACAGGAGGCAATCCAATCTCCTGTGGCTaGCGAAGCCAGGGTACCTGT +
Preference number: 4 (lower is better)
Translates to: TPNQLPMPSFLPPLTGGNPISCG*RSQGTC
Trigger: ACAGGTACCCTGGCTTCGGCAGCCACAGGAGATTGG...ATTGCCTCCTGTGAGGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGTGTAAATCAGGGCTGTaGAGGGTCTCTGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRCKSGL*RVSVKA
Trigger: TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACA...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGATATTGAGCATGGGGTaGCCAGGGTGGTCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: VCLRRCYHGNQRPADRAAILSMG*PGWSVN
Trigger: ATTGACAGACCACCCTGGGCACCCCATGCTCAATAT...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTCCAAACCAACTACGGGACAGAGAGAAGATaGAGATCCTCCCTCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PKFPPLLPSLQVGLQTNYGTERR*RSSLPQ
Trigger: CTGGGGGAGGGAGGATCTCCATCTTCTCTCTGTCCC...GTAGTTGGTTTGGAGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp ACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCTCACAGGAGGCAATGGCAGAAGCAAGTTCTaGGAGCTGGGCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: TPNQLPMPSFLPPLTGGNGRSKF*ELGQLL
Trigger: CAGAAGCTGGCCCAGCTCCCAGAACTTGCTTCTGCC...ATTGCCTCCTGTGAGGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGCCTTCTGGGTGTCTGTaGTCACCTGAAACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKPSGCL*SPETLR
Trigger: CCGGAGGGTTTCAGGTGACCACAGACACCCAGAAGG...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTATAGTAGGTGTTGACTaGATTGAGGACAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLIVGVD*IEDKGK
Trigger: TTTTCCTTTGTCCTCAATCCAGTCAACACCTACTAT...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGCTGTAGATCTTGGTaGAGAAACTGTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVSCRSW*RNCPGS
Trigger: AGAACCTGGACAGTTTCTTCACCAAGATCTACAGCT...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGCTTGACCCTGCACTCTaGAAACATGGTTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRLDPAL*KHGFQP
Trigger: TGGCTGGAAACCATGTTTTCAGAGTGCAGGGTCAAG...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CTCCCATCGCTTCAAGTCGGACTCCAAACCAACTACCTATGCCGTCCTTTCTCCGCACGACCCTGGCACTaGTCTTCCGGAATGAAAGAC +
Preference number: 4 (lower is better)
Translates to: LPSLQVGLQTNYLCRPFSARPWH*SSGMKD
Trigger: GTCTTTCATTCCGGAAGAGCAGTGCCAGGGTCGTGC...GGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTCCGACTTGAAGCGATGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp CTGTCCCCCACCTTGAGGAAACTCGAGGACTTCTTCCCAGGCAGCTGCTCCAGGCTTATTCCCTCTGGGTaGAGACCATCTCTAAGACTT +
Preference number: 4 (lower is better)
Translates to: LSPTLRKLEDFFPGSCSRLIPSG*RPSLRL
Trigger: AAGTCTTAGAGATGGTCTGCACCCAGAGGGAATAAG...CCTGGAGCAGCTGCCTGGGAAGAAGTCCTCGAGTTTCCTCAAGGTGGGGGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGTGTAAATCAGGGCTGTaGAGGGTCTCTGTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: VCLRRCYHGNQRPADRAACKSGL*RVSVKA
Trigger: TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACA...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGTGCGATGTCACACAATaGAAAGGGCATGGAATTCTG +
Preference number: 4 (lower is better)
Translates to: RGFWQERLHDIESKGEAGCDVTQ*KGHGIL
Trigger: CAGAATTCCATGCCCTTTGCATTGTGTGACATCGCA...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGATCCTCTCAGCACACTaGGCTGAGGGTAGGATGGCA +
Preference number: 4 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKILSAH*AEGRMA
Trigger: TGCCATCCTACCCTCAGCCCAGTGTGCTGAGAGGAT...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ATGGGGCCTCTAACAATGACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCCTTAGAGCTGTGCCCTaGGGGGCGCCAGAGTGGATG +
Preference number: 4 (lower is better)
Translates to: MGPLTMTPCVFLLHPPISLRAVP*GAPEWM
Trigger: CATCCACTCTGGCGCCCCCCAGGGCACAGCTCTAAG...GGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCATTGTTAGAGGCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp CCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTCCAAACCAACTACACAGAGCTGGGGTCCTaGGCAATTCGGGAAATGGAG +
Preference number: 4 (lower is better)
Translates to: PKFPPLLPSLQVGLQTNYTELGS*AIREME
Trigger: CTCCATTTCCCGAATTGCCCAGGACCCCAGCTCTGT...GTAGTTGGTTTGGAGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp ATGGGGCCTCTAACAATGACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCCTGGGGACACAGAGCTaGGGTCCTGGGCAATTCGGG +
Preference number: 4 (lower is better)
Translates to: MGPLTMTPCVFLLHPPISLGTQS*GPGQFG
Trigger: CCCGAATTGCCCAGGACCCCAGCTCTGTGTCCCCAG...GGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCATTGTTAGAGGCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp CCGCGCTTCCCTTCCCTCTGTAAATCAGGGCTGTGCAGGGTCTCTGTGAAAGCATGGCTTCCTGGTGCCTaGTACATAGTAGGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: PRFPSLCKSGLCRVSVKAWLPGA*YIVGVD
Trigger: GTCAACACCTACTATGTACCAGGCACCAGGAAGCCA...TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACAGAGGGAAGGGAAGCGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGATGGGGTGCCCAGGGTaGTCTGTCAATCAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQMGCPG*SVNQKK
Trigger: CTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGCAAAGTCCACAAAGCTaGAAAGACGCTCATGAGACC +
Preference number: 4 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRQSPQS*KDAHET
Trigger: GGTCTCATGAGCGTCTTTTCAGCTTTGTGGACTTTG...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp ACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCTCACAGGAGGCAATCCAAATTCCCACCACTaGTCCCATCGCTTCAAGTCG +
Preference number: 4 (lower is better)
Translates to: TPNQLPMPSFLPPLTGGNPNSHH*SHRFKS
Trigger: CGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGG...ATTGCCTCCTGTGAGGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGATATTGAGCATGGGGTaGCCAGGGTGGTCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPILSMG*PGWSVN
Trigger: ATTGACAGACCACCCTGGGCACCCCATGCTCAATAT...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGACAATGCAAAGGGCATaGAATTCTGAGTCCGAAGCC +
Preference number: 4 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQTMQRA*NSESEA
Trigger: GGCTTCGGACTCAGAATTCCATGCCCTTTGCATTGT...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ATGGGGCCTCTAACAATGACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCCCTTCTGGGTGTCTGTaGTCACCTGAAACCCTCCGG +
Preference number: 4 (lower is better)
Translates to: MGPLTMTPCVFLLHPPISPSGCL*SPETLR
Trigger: CCGGAGGGTTTCAGGTGACCACAGACACCCAGAAGG...GGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCATTGTTAGAGGCCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp TCGCTTCAAGTCGGACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCAGGACACATTCCAGTTaGGGATGTCTCCCCTTATTC +
Preference number: 4 (lower is better)
Translates to: SLQVGLQTNYLCRPFSLPRTHSS*GCLPLF
Trigger: GAATAAGGGGAGACATCCCCAACTGGAATGTGTCCT...GGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTCCGACTTGAAGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGTGCACTCTGAAAACATaGTTTCCAGCCAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKCTLKT*FPASLG
Trigger: GCCCAGACTGGCTGGAAACCATGTTTTCAGAGTGCA...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR TCA 90 bp CATCACCCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTCCAAACCAGCTGTAGATCTTGGTaGAGAAACTGTCCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: HHPKFPPLLPSLQVGLQTSCRSW*RNCPGS
Trigger: AGAACCTGGACAGTTTCTTCACCAAGATCTACAGCT...GGTTTGGAGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGGGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp GACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCTCACAGGAGGCAAACATCACACCCGTACTaGAGTCCAAAAACATCATCC +
Preference number: 4 (lower is better)
Translates to: DSKPTTYAVLSPSPHRRQTSHPY*SPKTSS
Trigger: GGATGATGTTTTTGGACTTCAGTACGGGTGTGATGT...TTGCCTCCTGTGAGGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGACGTCCTGCAGACCGTaGAGCGCATCCTGGCGACGG +
Preference number: 4 (lower is better)
Translates to: LCESILHSLRDETAKVMVTSCRP*SASWRR
Trigger: CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGT...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGGGACAGGATGGAGGCTaGAGCCTCACCCCACGGCTC +
Preference number: 4 (lower is better)
Translates to: LCESILHSLRDETAKVMVGQDGG*SLTPRL
Trigger: GAGCCGTGGGGTGAGGCTGCAGCCTCCATCCTGTCC...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ATGGGGCCTCTAACAATGACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCAGGGTCACTTTGCTGTaGAACGGCCCAGGTCTGGTA +
Preference number: 4 (lower is better)
Translates to: MGPLTMTPCVFLLHPPISRVTLL*NGPGLV
Trigger: TACCAGACCTGGGCCGTTCCACAGCAAAGTGACCCT...GGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCATTGTTAGAGGCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGATAGTAGGTGTTGACTaGATTGAGGACAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVIVGVD*IEDKGK
Trigger: TTTTCCTTTGTCCTCAATCCAGTCAACACCTACTAT...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGAGCCCAGGAGAGTCCTaGGGGCACTGCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LCESILHSLRDETAKVMVSPGES*GHCCEG
Trigger: TCCCTCACAGCAGTGCCCCCAGGACTCTCCTGGGCT...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGCCCTTCCGGGGATTCTaGCAGGAGCGGCTGCATGAC +
Preference number: 4 (lower is better)
Translates to: LCESILHSLRDETAKVMVPFRGF*QERLHD
Trigger: GTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGG...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGGGCACCCCAGGCAGCTaGATCTTGTTGTACTCGGCC +
Preference number: 4 (lower is better)
Translates to: LCESILHSLRDETAKVMVGTPGS*ILLYSA
Trigger: GGCCGAGTACAACAAGATGCAGCTGCCTGGGGTGCC...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR GCA 90 bp CTGTCATCTATGGGGCCTCTAACAATGACTCCTTGTGTTTTTCTACTCCACCCTTTCTTCCCAGGCAGCTaGTCCAGGACACATTCCAGT +
Preference number: 4 (lower is better)
Translates to: LSSMGPLTMTPCVFLLHPFFPGS*SRTHSS
Trigger: ACTGGAATGTGTCCTGGAGCAGCTGCCTGGGAAGAA...AGGGTGGAGTAGAAAAACACAAGGAGTCATTGTTAGAGGCCCCATAGATGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CCA 90 bp ATGGGGCCTCTAACAATGACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCTCCCCTTATTCCCTCTaGGTGCAGACCATCTCTAAG +
Preference number: 4 (lower is better)
Translates to: MGPLTMTPCVFLLHPPISSPYSL*VQTISK
Trigger: CTTAGAGATGGTCTGCACCCAGAGGGAATAAGGGGA...GGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCATTGTTAGAGGCCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp CTGTCATCTATGGGGCCTCTAACAATGACTCCTTGTGTTTTTCTACTCCACCCTAGACTTGTTTCCAGATaGCATCAGCATCTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LSSMGPLTMTPCVFLLHPRLVSR*HQHLLS
Trigger: GGAGAGGAGATGCTGATGGCATCTGGAAACAAGTCT...AGGGTGGAGTAGAAAAACACAAGGAGTCATTGTTAGAGGCCCCATAGATGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR GCA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGGTGTTCGGCTGCCGATaGTCCCAACTTGACCATCTC +
Preference number: 4 (lower is better)
Translates to: LCESILHSLRDETAKVMVVFGCR*SQLDHL
Trigger: GAGATGGTCAAGTTGGGAGCATCGGCAGCCGAACAC...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp ATGGGGCCTCTAACAATGACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCATAAATTGTCCCAGCTaGAAGACATCCTCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: MGPLTMTPCVFLLHPPISINCPS*KTSSSK
Trigger: CTTGCTGGAGGATGTCTTCCAGCTGGGACAATTTAT...GGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCATTGTTAGAGGCCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR TCA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGCTTGACCCTGCACTCTaGAAACATGGTTTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LCESILHSLRDETAKVMVLDPAL*KHGFQP
Trigger: TGGCTGGAAACCATGTTTTCAGAGTGCAGGGTCAAG...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CCA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGCTTCTCCAGAAAGGTTaGAAGGATGGGAGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LCESILHSLRDETAKVMVLLQKG*KDGSCC
Trigger: ACAACAGCTCCCATCCTTCCAACCTTTCTGGAGAAG...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS GCA 90 bp CGTCAGGGGCCGCGGCTGCACGCACAGGCCCCCGCTCCGCTGCAGTaGCAAGAGGCGGGACTGCACCTCTGCCCAGGGAACCGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: RQGPRLHAQAPAPLQ*QEAGLHLCPGNRAQ
Trigger: CTGAGCTCGGTTCCCTGGGCAGAGGTGCAGTCCCGCCTCTTGGCACTGCAGCGGAGCGGGGGCCTGTGCGTGCAGCCGCGGCCCCTGACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000639579.1
CDS GCA 90 bp AGCTCCGTCAGGGGCCGCGGCTGCACGCACAGGCCCCCGCTCCGCTaGAGTGCCAAGAGGCGGGACTGCACCTCTGCCCAGGGAACCGAG +
Preference number: 5 (lower is better)
Translates to: SSVRGRGCTHRPPLR*SAKRRDCTSAQGTE
Trigger: CTCGGTTCCCTGGGCAGAGGTGCAGTCCCGCCTCTTGGCACTGCAGCGGAGCGGGGGCCTGTGCGTGCAGCCGCGGCCCCTGACGGAGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000639579.1
CDS GCA 90 bp CTCGGTACTGCAGCAGCTGCGCCATCTGCCGGTAGGCGCGGTCCCTaGCGCCGGGGCCGGGCTCCTCCGGGAGGTAGTGCATGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: LGTAAAAPSAGRRGP*RRGRAPPGGSACGP
Trigger: TGGCCCACATGCACTACCTCCCGGAGGAGCCCGGCCCCGGCGGCAGGGACCGCGCCTACCGGCAGATGGCGCAGCTGCTGCAGTACCGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000617967.4
ENST00000639579.1
CDS CCA 90 bp TGCAGACCGTGCAGCGCATCCTGGCGACGGAGGGCGACATGGAGCTaGACGAGGCCGGCGACGTCATCGGCGTGCTGCGGGTGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: CRPCSASWRRRATWS*TRPATSSACCGCGG
Trigger: CCCTCCGCACCCGCAGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGGTCTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS CCA 90 bp ACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGGGCGACATaGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCTGCGGGTGC +
Preference number: 5 (lower is better)
Translates to: TSCRPCSASWRRRAT*SWTRPATSSACCGC
Trigger: GCACCCGCAGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS-3UTR CAA 90 bp TTGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCAGCAGCAGGTCGACATaGAGCGCCAGGCCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: LQERQLRGAVPWAFDPPGSSRST*SARPRL
Trigger: CAGCCGCGGCCTGGCGCTCAATGTCGACCTGCTGCT...GCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp TTGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTTCCCAAGCGCGGGGTaGCTTGCAGGGCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: LQERQLRGAVPWAFDPPGFPSAG*LAGLQP
Trigger: GGGCTGCAGCCCTGCAAGCAACCCCGCGCTTGGGAA...GCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp TTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGCAAGCGCGGGGTTGCTaGCAGGGCTGCAGCCCACTC +
Preference number: 5 (lower is better)
Translates to: FPFQFRESGCPTQVRPTRQARGC*QGCSPL
Trigger: GAGTGGGCTGCAGCCCTGCAAGCAACCCCGCGCTTG...CCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp TTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGTTCCCAAGCGCGGGGTaGCTTGCAGGGCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: FPFQFRESGCPTQVRPTRFPSAG*LAGLQP
Trigger: GGGCTGCAGCCCTGCAAGCAACCCCGCGCTTGGGAA...CCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS GCA 90 bp GGACAGGGGGCTGTCGGGCTCAGATCTCTCGGAGGCAGGAGAGGGTaGACGAAGAGGTTGGCCAGGAAGGCCTCAGGCAGGGGCGAGGTG +
Preference number: 5 (lower is better)
Translates to: GQGAVGLRSLGGRRG*TKRLARKASGRGEV
Trigger: CACCTCGCCCCTGCCTGAGGCCTTCCTGGCCAACCTCTTCGTGCACCCTCTCCTGCCTCCGAGAGATCTGAGCCCGACAGCCCCCTGTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000617967.4
ENST00000639579.1
CDS CCA 90 bp TCTCCTCATCAGGCGAGGGTGGCTGTGAGGGGCTGGAGCAGGGCCTaGACAGGATGGAGGCTGCAGCCTCACCCCACGGCTCCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SPHQARVAVRGWSRA*TGWRLQPHPTAPAA
Trigger: AGCAGCAGGAGCCGTGGGGTGAGGCTGCAGCCTCCATCCTGTCCAGGCCCTGCTCCAGCCCCTCACAGCCACCCTCGCCTGATGAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000617967.4
ENST00000639579.1
CDS-3UTR CAA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCTTGCAGGAGCGTCAGTaGCGGGGCGCAGTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: ATWSWTRPATSSACQSFSLQERQ*RGAVPW
Trigger: CCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCCAAGCGCGGGGTTGCTaGCAGGGCTGCAGCCCACTC +
Preference number: 5 (lower is better)
Translates to: ATWSWTRPATSSACQSFSQARGC*QGCSPL
Trigger: GAGTGGGCTGCAGCCCTGCAAGCAACCCCGCGCTTG...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS GCA 90 bp CACGTCCTCGTCGTAGACGGTGAGCACAAGCAGCGCGGCGAAGAGTaGACCCGCGAAGAAAACGAGCTGGCGGGCCAGCAGCGTGCGCAG +
Preference number: 5 (lower is better)
Translates to: HVLVVDGEHKQRGEE*TREENELAGQQRAQ
Trigger: CTGCGCACGCTGCTGGCCCGCCAGCTCGTTTTCTTCGCGGGTGCACTCTTCGCCGCGCTGCTTGTGCTCACCGTCTACGACGAGGACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000639579.1
CDS GCA 90 bp GCTGCTCCCCCGTGCAGTTCTCAGGCTCGTGATCGAGAAGGCAGGTaGAGCACTCAGCTGCCAGGAGTGGGGCCTGCCTCACTGTCGCCC +
Preference number: 5 (lower is better)
Translates to: AAPPCSSQARDREGR*STQLPGVGPASLSP
Trigger: GGGCGACAGTGAGGCAGGCCCCACTCCTGGCAGCTGAGTGCTGCACCTGCCTTCTCGATCACGAGCCTGAGAACTGCACGGGGGAGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617967.4
CDS CCA 90 bp ATGTGGGCCAGGGCTGTCTGCAGCAGGAGCTGCGGCGCACGACCCTaGCACTGCTCTTCCGGAATGAAAGACCTGGCGACGGTGGCGGTG +
Preference number: 5 (lower is better)
Translates to: MWARAVCSRSCGARP*HCSSGMKDLATVAV
Trigger: CACCGCCACCGTCGCCAGGTCTTTCATTCCGGAAGAGCAGTGCCAGGGTCGTGCGCCGCAGCTCCTGCTGCAGACAGCCCTGGCCCACAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000639579.1
CDS-3UTR CAA 90 bp TTTCCCTTCCAGTTCCGGGAGAGCGGCTGCCCGACTCAGGTCCGCCCGACCAGGTCGTGCGGCAGCTCGTaGAAGTGGCGCAGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: FPFQFRESGCPTQVRPTRSCGSS*KWRSCK
Trigger: CTTGCAGCTGCGCCACTTCAACGAGCTGCCGCACGA...CCTGGTCGGGCGGACCTGAGTCGGGCAGCCGCTCTCCCGGAACTGGAAGGGAAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGCCAGAGCTTTTCCGGGTGCACGAAGAGGTaGGCCAGGAAGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: ATWSWTRPATSSACQSFSGCTKR*ARKASG
Trigger: GCCTGAGGCCTTCCTGGCCAACCTCTTCGTGCACCC...GGAAAAGCTCTGGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGCTGGGTTCCCCACTGTaGTCTGGGGCTAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: DILRTELAAEVHRVLCLELGSPL*SGARGR
Trigger: CCTGCCTCTAGCCCCAGACAACAGTGGGGAACCCAG...CTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACACCCACTCCCATGACTTaGGTGTTCGGCTGCCGATGC +
Preference number: 5 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTPTPMT*VFGCRC
Trigger: GCATCGGCAGCCGAACACCAAAGTCATGGGAGTGGG...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CTGGCGACGGAGGGCGACATGGAGCTGGACGAGGCCGGCGACGTCATCGGCGTGGCCCAAGGTGGATTCTaGACTGTGCCAGAGCTGACC +
Preference number: 5 (lower is better)
Translates to: LATEGDMELDEAGDVIGVAQGGF*TVPELT
Trigger: GGTCAGCTCTGGCACAGTCAAGAATCCACCTTGGGC...CACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS GCA 90 bp CAAGCCGCATACGCACCCAGAGCTTTTCCTTGCAGGAGCGTCAGTTaGGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACA +
Preference number: 5 (lower is better)
Translates to: QAAYAPRAFPCRSVS*GAQCPGRSTLPAQT
Trigger: TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGGTGCGTATGCGGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS CCA 90 bp GGCAATTCGGGAAATGGAGGCAAGGAGGCTGGCTGTGGCCGCAGCTaGACAGGGGGCTGTCGGGCTCAGATCTCTCGGAGGCAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: GNSGNGGKEAGCGRS*TGGCRAQISRRQER
Trigger: CCTCTCCTGCCTCCGAGAGATCTGAGCCCGACAGCCCCCTGTCCAGCTGCGGCCACAGCCAGCCTCCTTGCCTCCATTTCCCGAATTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000617967.4
ENST00000639579.1
CDS CCA 90 bp TGGGGTCCTGGGCAATTCGGGAAATGGAGGCAAGGAGGCTGGCTGTaGCCGCAGCTGGACAGGGGGCTGTCGGGCTCAGATCTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: WGPGQFGKWRQGGWL*PQLDRGLSGSDLSE
Trigger: CTCCGAGAGATCTGAGCCCGACAGCCCCCTGTCCAGCTGCGGCCACAGCCAGCCTCCTTGCCTCCATTTCCCGAATTGCCCAGGACCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000617967.4
ENST00000639579.1
CDS-3UTR CAA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGAGCAGCGCGGGGTGTTaGGCCGAGTCCTCACCGCCT +
Preference number: 5 (lower is better)
Translates to: VTMATNVLQTVQRILATESSAGC*AESSPP
Trigger: AGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCT...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp AGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGCTGCTGGGTTCCCCACTGTaGTCTGGGGCTAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: STVPRRRAFPSAGLLAGLLGSPL*SGARGR
Trigger: CCTGCCTCTAGCCCCAGACAACAGTGGGGAACCCAG...CAGCCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CAGCAGCGCGGGGTGTTTGGCCGAGTCCTCACCGCCTTCTCCCGGGAACCTGACAGCGGGGCCACATGTTaGTCTGCGGCGATGTTACCA +
Preference number: 5 (lower is better)
Translates to: QQRGVFGRVLTAFSREPDSGATC*SAAMLP
Trigger: TGGTAACATCGCCGCAGACAAACATGTGGCCCCGCT...GTCAGGTTCCCGGGAGAAGGCGGTGAGGACTCGGCCAAACACCCCGCGCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGAGCAGCAGGTCGACATaGAGCGCCAGGCCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: RGFWQERLHDIESKGEAGSSRST*SARPRL
Trigger: CAGCCGCGGCCTGGCGCTCAATGTCGACCTGCTGCT...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GACATCCTGAGGACGGAGCTGGCTGCGGAGGTGCACCGCGTGCTGTGCCTCGAGGACTGGAGCCGTCACTaGACCAGGATGGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: DILRTELAAEVHRVLCLEDWSRH*TRMASP
Trigger: AGGAGAAGCCATCCTGGTCAAGTGACGGCTCCAGTC...CTCGAGGCACAGCACGCGGTGCACCTCCGCAGCCAGCTCCGTCCTCAGGATGTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGCCACCCGATCCCAGCTaGCCCTGCATCCTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: VTMATNVLQTVQRILATEPPDPS*PCILVG
Trigger: ACCCACCAGGATGCAGGGCAAGCTGGGATCGGGTGG...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS TCA 90 bp GTGCAAGAGGCCCGGTCAGGCTCCTTCTGGGTGTCTGTGGTCACCTaGAACCCTCCGGGGAACAGATTCCGGGCCTTCTGGGTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: VQEARSGSFWVSVVT*NPPGNRFRAFWVPH
Trigger: GTGGGGAACCCAGAAGGCCCGGAATCTGTTCCCCGGAGGGTTTCAGGTGACCACAGACACCCAGAAGGAGCCTGACCGGGCCTCTTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000469530.4
ENST00000471797.1
ENST00000605952.5
ENST00000611177.1
ENST00000617967.4
ENST00000639579.1
CDS TCA 90 bp CGACTCAGGTCCGCCCGACCAGGATCAGCCCCGCTCCTCCCCTCTTaGGGTGGTGCCTTCTCACATCTGTCCAGAGGCTGTGCAGTTGTG +
Preference number: 5 (lower is better)
Translates to: RLRSARPGSAPLLPS*GGAFSHLSRGCAVV
Trigger: CACAACTGCACAGCCTCTGGACAGATGTGAGAAGGCACCACCTCAAGAGGGGAGGAGCGGGGCTGATCCTGGTCGGGCGGACCTGAGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476282.1
ENST00000617967.4
CDS GCA 90 bp CACTCAGCTGCCAGGAGTGGGGCCCTGAGGAGTCGTCTCAGTCAGTaGAAGAGGCCCGGTCAGGCTCCTTCTGGGTGTCTGTGGTCACCT +
Preference number: 5 (lower is better)
Translates to: HSAARSGALRSRLSQ*KRPGQAPSGCLWSP
Trigger: AGGTGACCACAGACACCCAGAAGGAGCCTGACCGGGCCTCTTGCACTGACTGAGACGACTCCTCAGGGCCCCACTCCTGGCAGCTGAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471797.1
ENST00000605952.5
ENST00000639579.1
CDS CCA 90 bp GCGGGCTGGAGCGGATCCTCTCAGCACACTGGGCTGAGGGTAGGATaGCATCTGACAGGGTCACTTTGCTGTGGAACGGCCCAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: AGWSGSSQHTGLRVG*HLTGSLCCGTAQVW
Trigger: CCAGACCTGGGCCGTTCCACAGCAAAGTGACCCTGTCAGATGCCATCCTACCCTCAGCCCAGTGTGCTGAGAGGATCCGCTCCAGCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000466157.2
ENST00000469530.4
ENST00000473134.5
ENST00000473409.5
ENST00000605952.5
ENST00000617967.4
ENST00000639579.1
CDS-3UTR CAA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGGGGTGCACGAAGAGGTaGGCCAGGAAGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVGCTKR*ARKASG
Trigger: GCCTGAGGCCTTCCTGGCCAACCTCTTCGTGCACCC...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGGTCCAGGCACTGGCATaGCCCCCTTCCGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: VTMATNVLQTVQRILATEVQALA*PPSGDS
Trigger: AGAATCCCCGGAAGGGGGCAATGCCAGTGCCTGGAC...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACATACAAGGTGTTCATATaGAGCATGGGGTGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTYKVFI*SMGCPG
Trigger: CCCTGGGCACCCCATGCTCAATATGAACACCTTGTA...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS CCA 90 bp CTCAGTCAGTGCAAGAGGCCCGGTCAGGCTCCTTCTGGGTGTCTGTaGTCACCTGAAACCCTCCGGGGAACAGATTCCGGGCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: LSQCKRPGQAPSGCL*SPETLRGTDSGPSG
Trigger: CCCAGAAGGCCCGGAATCTGTTCCCCGGAGGGTTTCAGGTGACCACAGACACCCAGAAGGAGCCTGACCGGGCCTCTTGCACTGACTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000469530.4
ENST00000471797.1
ENST00000605952.5
ENST00000611177.1
ENST00000617967.4
ENST00000639579.1
CDS CCA 90 bp CAGGTCCGCCCGACCAGGATCAGCCCCGCTCCTCCCCTCTTGAGGTaGTGCCTTCTCACATCTGTCCAGAGGCTGTGCAGTTGTGGGTAT +
Preference number: 5 (lower is better)
Translates to: QVRPTRISPAPPLLR*CLLTSVQRLCSCGY
Trigger: ATACCCACAACTGCACAGCCTCTGGACAGATGTGAGAAGGCACCACCTCAAGAGGGGAGGAGCGGGGCTGATCCTGGTCGGGCGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476282.1
ENST00000617967.4
CDS-3UTR CAA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGTTGCAGGAGCGTCAGTaGCGGGGCGCAGTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQLQERQ*RGAVPW
Trigger: CCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAA...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CTGTCCCCCACCTTGAGGAAACTCGAGGACTTCTTCCCAGGCAGCTGCTCCAGGTCGTGCGGCAGCTCGTaGAAGTGGCGCAGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: LSPTLRKLEDFFPGSCSRSCGSS*KWRSCK
Trigger: CTTGCAGCTGCGCCACTTCAACGAGCTGCCGCACGA...CCTGGAGCAGCTGCCTGGGAAGAAGTCCTCGAGTTTCCTCAAGGTGGGGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGTCGTGCGGCAGCTCGTaGAAGTGGCGCAGCTGCAAG +
Preference number: 5 (lower is better)
Translates to: RGFWQERLHDIESKGEAGSCGSS*KWRSCK
Trigger: CTTGCAGCTGCGCCACTTCAACGAGCTGCCGCACGA...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGCCAGGCAGCTGCATCTaGTTGTACTCGGCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: VTMATNVLQTVQRILATEPGSCI*LYSAPE
Trigger: CTCTGGGGCCGAGTACAACAAGATGCAGCTGCCTGG...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTGGATGGGAGCTGTTGTaGCTTCCACAAAGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLGWELL*LPQRSV
Trigger: CACAGACCTTTGTGGAAGCAACAACAGCTCCCATCC...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp AGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACAGAAGGATGGGAGCTGTaGTTGCTTCCACAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: SVSCGAQCPGRSTLPAQTEGWEL*LLPQRS
Trigger: AGACCTTTGTGGAAGCAACAACAGCTCCCATCCTTC...TGTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS GCA 90 bp AGAGTGGATGCGCCAGGGAGAACCGCATCAAAGAAAGCTCAGTCTTaGCGTCCTCCGCACGCTGAGACAGCGAGGCCTCAGTCTGTCCCG +
Preference number: 5 (lower is better)
Translates to: RVDAPGRTASKKAQS*RPPHAETARPQSVP
Trigger: CGGGACAGACTGAGGCCTCGCTGTCTCAGCGTGCGGAGGACGGCAAGACTGAGCTTTCTTTGATGCGGTTCTCCCTGGCGCATCCACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000617967.4
ENST00000639579.1
CDS CCA 90 bp TTGTACTCGGCCCCAGAGGTGCCCAAGAAACTTAGAGCTGTGCCCTaGGGGGCGCCAGAGTGGATGCGCCAGGGAGAACCGCATCAAAGA +
Preference number: 5 (lower is better)
Translates to: LYSAPEVPKKLRAVP*GAPEWMRQGEPHQR
Trigger: TCTTTGATGCGGTTCTCCCTGGCGCATCCACTCTGGCGCCCCCCAGGGCACAGCTCTAAGTTTCTTGGGCACCTCTGGGGCCGAGTACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000617967.4
ENST00000639579.1
CDS-3UTR CAA 90 bp GCCAAAGTAATGGTGGTTTCAGCCCAAAACGCTGGGCTGCCAGGCTGGGCGACGGACATGAAGCAGGGGTaGCTGCTCCTCCCCGTGGAT +
Preference number: 5 (lower is better)
Translates to: AKVMVVSAQNAGLPGWATDMKQG*LLLPVD
Trigger: ATCCACGGGGAGGAGCAGCAACCCCTGCTTCATGTC...CGTCGCCCAGCCTGGCAGCCCAGCGTTTTGGGCTGAAACCACCATTACTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGGACATGAAGCAGGGGTaGCTGCTCCTCCCCGTGGAT +
Preference number: 5 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVDMKQG*LLLPVD
Trigger: ATCCACGGGGAGGAGCAGCAACCCCTGCTTCATGTC...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGTCTGACAGGGTCACTTaGCTGTGGAACGGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: VTMATNVLQTVQRILATESDRVT*LWNGPG
Trigger: ACCTGGGCCGTTCCACAGCAAAGTGACCCTGTCAGA...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GACTCCAAACCAACTACCTATGCCGTCCTTTCTCCCTCCCCTCACAGGAGGCAAAGCAGCAGGTCGACATaGAGCGCCAGGCCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: DSKPTTYAVLSPSPHRRQSSRST*SARPRL
Trigger: CAGCCGCGGCCTGGCGCTCAATGTCGACCTGCTGCT...TTGCCTCCTGTGAGGGGAGGGAGAAAGGACGGCATAGGTAGTTGGTTTGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGGACTGGAGCCGTCACTaGACCAGGATGGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: VTMATNVLQTVQRILATEDWSRH*TRMASP
Trigger: AGGAGAAGCCATCCTGGTCAAGTGACGGCTCCAGTC...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CCGCGCTTCCCTTCCCTCTGTAAATCAGGGCTGTGCAGGGTCTCTGTGAAAGCACCACCCGATCCCAGCTaGCCCTGCATCCTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: PRFPSLCKSGLCRVSVKAPPDPS*PCILVG
Trigger: ACCCACCAGGATGCAGGGCAAGCTGGGATCGGGTGG...TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACAGAGGGAAGGGAAGCGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp ACTAGCACTGTGCCCCGGAGAAGAGCCTTCCCAAGCGCGGGGTTGCTTGCAGGGTCCAGAGGACGCCACTaGACCCTGCACTCTGAAAAC +
Preference number: 5 (lower is better)
Translates to: TSTVPRRRAFPSAGLLAGSRGRH*TLHSEN
Trigger: GTTTTCAGAGTGCAGGGTCAAGTGGCGTCCTCTGGA...CCCTGCAAGCAACCCCGCGCTTGGGAAGGCTCTTCTCCGGGGCACAGTGCTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGGCCGATGCTCCCAACTaGACCATCTCTACCGCGACG +
Preference number: 5 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRADAPN*TISTAT
Trigger: CGTCGCGGTAGAGATGGTCAAGTTGGGAGCATCGGC...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGAGGCTGGGGCCGATGCTCCCAACTaGACCATCTCTACCGCGACG +
Preference number: 5 (lower is better)
Translates to: RGFWQERLHDIESKGEAGADAPN*TISTAT
Trigger: CGTCGCGGTAGAGATGGTCAAGTTGGGAGCATCGGC...CCCAGCCTCACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS TCA 90 bp GCTACCACGAAGACATTTTCGGGCTCACGCTGCGCACCCAGGAGGTaGCAAGCCGCATACGCACCCAGAGCTTTTCCTTGCAGGAGCGTC +
Preference number: 5 (lower is better)
Translates to: ATTKTFSGSRCAPRR*QAAYAPRAFPCRSV
Trigger: GACGCTCCTGCAAGGAAAAGCTCTGGGTGCGTATGCGGCTTGTCACCTCCTGGGTGCGCAGCGTGAGCCCGAAAATGTCTTCGTGGTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS GCA 90 bp CCCTCACAGGAGGCAATACTGACCCTGAGGAGTCGTCTCAGTCAGTaGAAGAGGCCCGGTCAGGCTCCTTCTGGGTGTCTGTGGTCACCT +
Preference number: 5 (lower is better)
Translates to: PSQEAILTLRSRLSQ*KRPGQAPSGCLWSP
Trigger: AGGTGACCACAGACACCCAGAAGGAGCCTGACCGGGCCTCTTGCACTGACTGAGACGACTCCTCAGGGTCAGTATTGCCTCCTGTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGGTCCAGGCACTGGCATaGCCCCCTTCCGGGGATTCT +
Preference number: 5 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRVQALA*PPSGDS
Trigger: AGAATCCCCGGAAGGGGGCAATGCCAGTGCCTGGAC...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGAGTCCAGAGGACGCCACTaGACCCTGCACTCTGAAAAC +
Preference number: 5 (lower is better)
Translates to: VTMATNVLQTVQRILATESRGRH*TLHSEN
Trigger: GTTTTCAGAGTGCAGGGTCAAGTGGCGTCCTCTGGA...CTCCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS TCA 90 bp GGGCCTGCCTCACTGTCGCCCTTCCATTTAGCTCGGCCTCATCCTTaGCCTCTGTCCCCCACCTTGAGGAAACTCGAGGACTTCTTCCCA +
Preference number: 5 (lower is better)
Translates to: GPASLSPFHLARPHP*PLSPTLRKLEDFFP
Trigger: TGGGAAGAAGTCCTCGAGTTTCCTCAAGGTGGGGGACAGAGGTCAAGGATGAGGCCGAGCTAAATGGAAGGGCGACAGTGAGGCAGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000617967.4
CDS-3UTR CAA 90 bp GTTTGTCTGCGGCGATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGAGCGGGGCCACATGTTaGTCTGCGGCGATGTTACCA +
Preference number: 5 (lower is better)
Translates to: VCLRRCYHGNQRPADRAASGATC*SAAMLP
Trigger: TGGTAACATCGCCGCAGACAAACATGTGGCCCCGCT...CGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACATCGCCGCAGACAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CTACAAGCCCCAAGGAACCTGAAAGTGCTGCTGGCAGCCGCCAGCATGACGAATGACATGAAGCAGGGGTaGCTGCTCCTCCCCGTGGAT +
Preference number: 5 (lower is better)
Translates to: LQAPRNLKVLLAAASMTNDMKQG*LLLPVD
Trigger: ATCCACGGGGAGGAGCAGCAACCCCTGCTTCATGTC...ATTCGTCATGCTGGCGGCTGCCAGCAGCACTTTCAGGTTCCTTGGGGCTTGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGGGCAGCTGCATCTTGTaGTACTCGGCCCCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQGSCIL*YSAPEV
Trigger: CACCTCTGGGGCCGAGTACAACAAGATGCAGCTGCC...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTCCAAACCAACTACGGGTGCACGAAGAGGTaGGCCAGGAAGGCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: PKFPPLLPSLQVGLQTNYGCTKR*ARKASG
Trigger: GCCTGAGGCCTTCCTGGCCAACCTCTTCGTGCACCC...GTAGTTGGTTTGGAGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp CATCACCCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTCCAAACCCTGGGTTCCCCACTGTaGTCTGGGGCTAGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: HHPKFPPLLPSLQVGLQTLGSPL*SGARGR
Trigger: CCTGCCTCTAGCCCCAGACAACAGTGGGGAACCCAG...GGTTTGGAGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGGGTGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS TCA 90 bp CCTGTAAAACACCTGGATGTCCCAGTAGCTGAAGAGGTTGCAGACTaGGCGAAGCAGTTGGACCAGCCAGAAGCCGGCAGCCAGGACCAG +
Preference number: 5 (lower is better)
Translates to: PVKHLDVPVAEEVAD*AKQLDQPEAGSQDQ
Trigger: CTGGTCCTGGCTGCCGGCTTCTGGCTGGTCCAACTGCTTCGCTCAGTCTGCAACCTCTTCAGCTACTGGGACATCCAGGTGTTTTACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000466157.2
ENST00000469530.4
ENST00000473134.5
ENST00000473409.5
ENST00000605952.5
ENST00000617967.4
ENST00000639579.1
CDS CCA 90 bp CTCCAGGCCATCTTCGGCTCTGTCACCAGAAGCCTTCCCAGGACCTaGGCTATGTCCACATCTGGCAGTGGGGCACTGTCAGATCTCATT +
Preference number: 5 (lower is better)
Translates to: LQAIFGSVTRSLPRT*AMSTSGSGALSDLI
Trigger: AATGAGATCTGACAGTGCCCCACTGCCAGATGTGGACATAGCCCAGGTCCTGGGAAGGCTTCTGGTGACAGAGCCGAAGATGGCCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473409.5
CDS-3UTR CAA 90 bp GAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGTCTGACAGGGTCACTTaGCTGTGGAACGGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: EWWSRKGKGDLMECLSCQSDRVT*LWNGPG
Trigger: ACCTGGGCCGTTCCACAGCAAAGTGACCCTGTCAGA...CTGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CTGTGGGAGGAGACGGCTCTTGGCAAGCAGTCCAGGGGTCTAGATTCCAGAGATGACTGGAGCCGTCACTaGACCAGGATGGCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LWEETALGKQSRGLDSRDDWSRH*TRMASP
Trigger: AGGAGAAGCCATCCTGGTCAAGTGACGGCTCCAGTC...ATCTCTGGAATCTAGACCCCTGGACTGCTTGCCAAGAGCCGTCTCCTCCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp CCCCCTTCCGGGGATTCTGGCAGGAGCGGCTGCATGACATTGAGAGCAAAGGTGGGATGGGAGCTGTTGTaGCTTCCACAAAGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: PPSGDSGRSGCMTLRAKVGWELL*LPQRSV
Trigger: CACAGACCTTTGTGGAAGCAACAACAGCTCCCATCC...CACCTTTGCTCTCAATGTCATGCAGCCGCTCCTGCCAGAATCCCCGGAAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGTGCCAGAGCTTTTCCTaGCAGGAGCGTCAGTTGCGG +
Preference number: 5 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRCQSFS*QERQLR
Trigger: CCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGCA...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CCGCGCTTCCCTTCCCTCTGTAAATCAGGGCTGTGCAGGGTCTCTGTGAAAGCAGCCCAAGGTGGATTCTaGACTGTGCCAGAGCTGACC +
Preference number: 5 (lower is better)
Translates to: PRFPSLCKSGLCRVSVKAAQGGF*TVPELT
Trigger: GGTCAGCTCTGGCACAGTCAAGAATCCACCTTGGGC...TGCTTTCACAGAGACCCTGCACAGCCCTGATTTACAGAGGGAAGGGAAGCGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS TCA 90 bp GGATGTGCAGGGCCTCCCTGTAAAACACCTGGATGTCCCAGTAGCTaGAGAGGTTGCAGACTGAGCGAAGCAGTTGGACCAGCCAGAAGC +
Preference number: 5 (lower is better)
Translates to: GCAGPPCKTPGCPSS*RGCRLSEAVGPARS
Trigger: GCTTCTGGCTGGTCCAACTGCTTCGCTCAGTCTGCAACCTCTTCAGCTACTGGGACATCCAGGTGTTTTACAGGGAGGCCCTGCACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000466157.2
ENST00000469530.4
ENST00000473134.5
ENST00000473409.5
ENST00000605952.5
ENST00000617967.4
ENST00000639579.1
CDS CCA 90 bp GGGCAGGTGTCAATAAGACCTCGCTCTTTCTGCCCTCTTTCCAGTTaGCCCTTCCACCTGTACAGTCCCACTTCTTCCCCTCTCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GQVSIRPRSFCPLSS*PFHLYSPTSSPLLC
Trigger: GCAGAGGAGAGGGGAAGAAGTGGGACTGTACAGGTGGAAGGGCCAACTGGAAAGAGGGCAGAAAGAGCGAGGTCTTATTGACACCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473134.5
CDS-3UTR CAA 90 bp ACCTGCCTCACTGTCGCCCTTCCATTTAGCTCGGCCTCATCCTTGACCTCTGTCCAGAGGCAGGTGTCATaGCAGGTTGAGCCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: TCLTVALPFSSASSLTSVQRQVS*QVEPVL
Trigger: CAACACAGGCTCAACCTGCAATGACACCTGCCTCTG...GACAGAGGTCAAGGATGAGGCCGAGCTAAATGGAAGGGCGACAGTGAGGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp GGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCTGAGAGCCGCCTGGCTTGACAATGAAAATAAATaGTCCCAGCTGGAAGACATC +
Preference number: 5 (lower is better)
Translates to: GVRPSRLRHQQPLRAAWLDNENK*SQLEDI
Trigger: GATGTCTTCCAGCTGGGACAATTTATTTTCATTGTC...AAGCCAGGCGGCTCTCAGGGGCTGTTGGTGTCTGAGCCGGGAGGGTCGAACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GGGAGCCACACCCACTTCCTGGGACATCACACCCGTACTGAAGTCCAAAAACATGGCAGCTGCATCTTGTaGTACTCGGCCCCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: GSHTHFLGHHTRTEVQKHGSCIL*YSAPEV
Trigger: CACCTCTGGGGCCGAGTACAACAAGATGCAGCTGCC...ATGTTTTTGGACTTCAGTACGGGTGTGATGTCCCAGGAAGTGGGTGTGGCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp ACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCTGTGGCTGCCGAAGCCAGCCAGGCAGCTGCATCTaGTTGTACTCGGCCCCAGAG +
Preference number: 5 (lower is better)
Translates to: TPCVFLLHPPISCGCRSQPGSCI*LYSAPE
Trigger: CTCTGGGGCCGAGTACAACAAGATGCAGCTGCCTGG...CTGGCTTCGGCAGCCACAGGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp AATGACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCTGTGGCTGCCGAAGGGGAGGAGACGGCTCTaGGCAAGCAGTCCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: NDSLCFSTPPSNLLWLPKGRRRL*ASSPGV
Trigger: GACCCCTGGACTGCTTGCCAAGAGCCGTCTCCTCCC...CTTCGGCAGCCACAGGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp CCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTCCAAACCAACTACAGCTCGGCCTCATCCTaGACCTCTGTCCCCCACCTT +
Preference number: 5 (lower is better)
Translates to: PKFPPLLPSLQVGLQTNYSSASS*TSVPHL
Trigger: AAGGTGGGGGACAGAGGTCAAGGATGAGGCCGAGCT...GTAGTTGGTTTGGAGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGGAAGGATGGGAGCTGTaGTTGCTTCCACAAAGGTCT +
Preference number: 5 (lower is better)
Translates to: MLPWQPTSCRPCSASWRREGWEL*LLPQRS
Trigger: AGACCTTTGTGGAAGCAACAACAGCTCCCATCCTTC...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGTGCCAGAGCTTTTCCTaGCAGGAGCGTCAGTTGCGG +
Preference number: 5 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPCQSFS*QERQLR
Trigger: CCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGCA...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GGGGAAGGGGACTGCGATGTCACACAATGCAAAGGGCATGGAATTCTGAGTCCGCAGAGGCAGGTGTCATaGCAGGTTGAGCCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: GEGDCDVTQCKGHGILSPQRQVS*QVEPVL
Trigger: CAACACAGGCTCAACCTGCAATGACACCTGCCTCTG...CGGACTCAGAATTCCATGCCCTTTGCATTGTGTGACATCGCAGTCCCCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CCCAAATTCCCACCACTGCTCCCATCGCTTCAAGTCGGACTCCAAACCAACTACCCTCTGTCCCCCACCTaGAGGAAACTCGAGGACTTC +
Preference number: 5 (lower is better)
Translates to: PKFPPLLPSLQVGLQTNYPLSPT*RKLEDF
Trigger: GAAGTCCTCGAGTTTCCTCAAGGTGGGGGACAGAGG...GTAGTTGGTTTGGAGTCCGACTTGAAGCGATGGGAGCAGTGGTGGGAATTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp ATGGGGTGCCCAGGGTGGTCTGTCAATCAAAAGAAGAGGGCTGTGACTGGGAGGGCTTCTCCAGAAAGGTaGGAAGGATGGGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: MGCPGWSVNQKKRAVTGRASPER*EGWELL
Trigger: CAACAGCTCCCATCCTTCCAACCTTTCTGGAGAAGC...CCTCCCAGTCACAGCCCTCTTCTTTTGATTGACAGACCACCCTGGGCACCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS TCA 90 bp GTCATTCTTTTGACAGAGTCCTACACGCCACTTGACCCTGCACTCTaGAAACATGGTTTCCAGCCAGTCTGGGCTGCTCCCCCGTGCAGT +
Preference number: 5 (lower is better)
Translates to: VILLTESYTPLDPAL*KHGFQPVWAAPPCS
Trigger: ACTGCACGGGGGAGCAGCCCAGACTGGCTGGAAACCATGTTTTCAGAGTGCAGGGTCAAGTGGCGTGTAGGACTCTGTCAAAAGAATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000471797.1
ENST00000476282.1
ENST00000617967.4
CDS CCA 90 bp CACCAGAAGCCTTCCCAGGACCTGGGCTATGTCCACATCTGGCAGTaGGGCACTGTCAGATCTCATTTGAAGGCTGCAAACCTCACTTCA +
Preference number: 5 (lower is better)
Translates to: HQKPSQDLGYVHIWQ*GTVRSHLKAANLTS
Trigger: TGAAGTGAGGTTTGCAGCCTTCAAATGAGATCTGACAGTGCCCCACTGCCAGATGTGGACATAGCCCAGGTCCTGGGAAGGCTTCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473409.5
CDS-3UTR CAA 90 bp GGAGAATATGAAGTGGGAGCGGGGAAGGGGACTGCGATGTCACACAATGCAAAGCAGAGGCAGGTGTCATaGCAGGTTGAGCCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: GEYEVGAGKGTAMSHNAKQRQVS*QVEPVL
Trigger: CAACACAGGCTCAACCTGCAATGACACCTGCCTCTG...CTTTGCATTGTGTGACATCGCAGTCCCCTTCCCCGCTCCCACTTCATATTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CTACAAGCCCCAAGGAACCTGAAAGTGCTGCTGGCAGCCGCCAGCATGACGAATCAGGACACATTCCAGTaGGGGATGTCTCCCCTTATT +
Preference number: 5 (lower is better)
Translates to: LQAPRNLKVLLAAASMTNQDTFQ*GMSPLI
Trigger: AATAAGGGGAGACATCCCCAACTGGAATGTGTCCTG...ATTCGTCATGCTGGCGGCTGCCAGCAGCACTTTCAGGTTCCTTGGGGCTTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp AGAATGGTGGAGCAGGAAAGGCAAAGGGGACCTGATGGAGTGTCTCTCCTGCCAGCTTCTCCAGAAAGGTaGGAAGGATGGGAGCTGTTG +
Preference number: 5 (lower is better)
Translates to: RMVEQERQRGPDGVSLLPASPER*EGWELL
Trigger: CAACAGCTCCCATCCTTCCAACCTTTCTGGAGAAGC...TGGCAGGAGAGACACTCCATCAGGTCCCCTTTGCCTTTCCTGCTCCACCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS GCA 90 bp TGCGGGGTTCCTGCTAAGGTCTCCGAGTCGGGTTCTGATCCACTGTaGTCTTTTCCGACAGGATCAGCAACGCTACCACGAAGACATTTT +
Preference number: 5 (lower is better)
Translates to: CGVPAKVSESGSDPL*SFPTGSATLPRRHF
Trigger: AAAATGTCTTCGTGGTAGCGTTGCTGATCCTGTCGGAAAAGAGCACAGTGGATCAGAACCCGACTCGGAGACCTTAGCAGGAACCCCGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS-3UTR CAA 90 bp AATGACTCCTTGTGTTTTTCTACTCCACCCTCCAATCTCCTGTGGCTGCCGAAGTCTGACAGGGTCACTTaGCTGTGGAACGGCCCAGGT +
Preference number: 5 (lower is better)
Translates to: NDSLCFSTPPSNLLWLPKSDRVT*LWNGPG
Trigger: ACCTGGGCCGTTCCACAGCAAAGTGACCCTGTCAGA...CTTCGGCAGCCACAGGAGATTGGAGGGTGGAGTAGAAAAACACAAGGAGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS TCA 90 bp TGGGCTATGTCCACATCTGGCAGTGGGGCACTGTCAGATCTCATTTaGAGGCTGCAAACCTCACTTCAGCCCAGTTTCACTCAGCTTTCC +
Preference number: 5 (lower is better)
Translates to: WAMSTSGSGALSDLI*RLQTSLQPSFTQLS
Trigger: GGAAAGCTGAGTGAAACTGGGCTGAAGTGAGGTTTGCAGCCTTCAAATGAGATCTGACAGTGCCCCACTGCCAGATGTGGACATAGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473409.5
CDS GCA 90 bp ATTATTCTGGGCCTAGGGCAGGTGTCAATAAGACCTCGCTCTTTCTaGCCTCTTTCCAGTTGGCCCTTCCACCTGTACAGTCCCACTTCT +
Preference number: 5 (lower is better)
Translates to: IILGLGQVSIRPRSF*PLSSWPFHLYSPTS
Trigger: AGAAGTGGGACTGTACAGGTGGAAGGGCCAACTGGAAAGAGGGCAGAAAGAGCGAGGTCTTATTGACACCTGCCCTAGGCCCAGAATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473134.5
CDS GCA 90 bp TGTCCACATCTGGCAGTGGGGCACTGTCAGATCTCATTTGAAGGCTaGAAACCTCACTTCAGCCCAGTTTCACTCAGCTTTCCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: CPHLAVGHCQISFEG*KPHFSPVSLSFPSP
Trigger: TGGACTGGGAAAGCTGAGTGAAACTGGGCTGAAGTGAGGTTTGCAGCCTTCAAATGAGATCTGACAGTGCCCCACTGCCAGATGTGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473409.5
CDS-3UTR CAA 90 bp ATGTTACCATGGCAACCAACGTCCTGCAGACCGTGCAGCGCATCCTGGCGACGGGACAATGAAAATAAATaGTCCCAGCTGGAAGACATC +
Preference number: 5 (lower is better)
Translates to: MLPWQPTSCRPCSASWRRDNENK*SQLEDI
Trigger: GATGTCTTCCAGCTGGGACAATTTATTTTCATTGTC...CCGTCGCCAGGATGCGCTGCACGGTCTGCAGGACGTTGGTTGCCATGGTAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp GGTCCTGCCCAACTAAAGCACCTGGGCCTGTCATCTATGGGGCCTCTAACAATGGACAATGAAAATAAATaGTCCCAGCTGGAAGACATC +
Preference number: 5 (lower is better)
Translates to: GPAQLKHLGLSSMGPLTMDNENK*SQLEDI
Trigger: GATGTCTTCCAGCTGGGACAATTTATTTTCATTGTC...CATTGTTAGAGGCCCCATAGATGACAGGCCCAGGTGCTTTAGTTGGGCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS-3UTR CAA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGGGCAGCTGCATCTTGTaGTACTCGGCCCCAGAGGTG +
Preference number: 5 (lower is better)
Translates to: LCESILHSLRDETAKVMVGSCIL*YSAPEV
Trigger: CACCTCTGGGGCCGAGTACAACAAGATGCAGCTGCC...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS-3UTR CAA 90 bp CTCTGTGAAAGCATTCTACACTCTCTTAGAGATGAAACAGCCAAAGTAATGGTGTACAAGGTGTTCATATaGAGCATGGGGTGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: LCESILHSLRDETAKVMVYKVFI*SMGCPG
Trigger: CCCTGGGCACCCCATGCTCAATATGAACACCTTGTA...CACCATTACTTTGGCTGTTTCATCTCTAAGAGAGTGTAGAATGCTTTCACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000605952.5
ENST00000639579.1
CDS GCA 72 bp AGGGGCCGCGGCTGCACGCACAGGCCCCCGCTCCGCTaGAGTGCCAAGAGGCGGGACTGCACCTCTGCCCAG +
Preference number: 6 (lower is better)
Translates to: RGRGCTHRPPLR*SAKRRDCTSAQ
Trigger: CTGGGCAGAGGTGCAGTCCCGCCTCTTGGCACTGCAGCGGAGCGGGGGCCTGTGCGTGCAGCCGCGGCCCCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000639579.1
CDS GCA 72 bp CCGCGGCTGCACGCACAGGCCCCCGCTCCGCTGCAGTaGCAAGAGGCGGGACTGCACCTCTGCCCAGGGAAC +
Preference number: 6 (lower is better)
Translates to: PRLHAQAPAPLQ*QEAGLHLCPGN
Trigger: GTTCCCTGGGCAGAGGTGCAGTCCCGCCTCTTGGCACTGCAGCGGAGCGGGGGCCTGTGCGTGCAGCCGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000639579.1
CDS GCA 72 bp CGGTGGTGGATGTCCAGCTCCGTCAGGGGCCGCGGCTaGACGCACAGGCCCCCGCTCCGCTGCAGTGCCAAG +
Preference number: 6 (lower is better)
Translates to: RWWMSSSVRGRG*THRPPLRCSAK
Trigger: CTTGGCACTGCAGCGGAGCGGGGGCCTGTGCGTGCAGCCGCGGCCCCTGACGGAGCTGGACATCCACCACCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000639579.1
CDS CCA 72 bp TGCAGCGCATCCTGGCGACGGAGGGCGACATGGAGCTaGACGAGGCCGGCGACGTCATCGGCGTGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: CSASWRRRATWS*TRPATSSACCG
Trigger: CCCGCAGCACGCCGATGACGTCGCCGGCCTCGTCCAGCTCCATGTCGCCCTCCGTCGCCAGGATGCGCTGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS GCA 72 bp TGGCCAGCGCCACCTGGTAGTTGGTGTAGCGCAGGATaGGGTGGTGGATGTCCAGCTCCGTCAGGGGCCGCG +
Preference number: 6 (lower is better)
Translates to: WPAPPGSWCSAG*GGGCPAPSGAA
Trigger: CGCGGCCCCTGACGGAGCTGGACATCCACCACCGCATCCTGCGCTACACCAACTACCAGGTGGCGCTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000639579.1
CDS TCA 72 bp CGTGCTCCACGGCTAGCACGTCCTCGTCGTAGACGGTaGGCACAAGCAGCGCGGCGAAGAGTGCACCCGCGA +
Preference number: 6 (lower is better)
Translates to: RAPRLARPRRRR*AQAARRRVHPR
Trigger: TCGCGGGTGCACTCTTCGCCGCGCTGCTTGTGCTCACCGTCTACGACGAGGACGTGCTAGCCGTGGAGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000639579.1
CDS GCA 72 bp TACGCACCCAGAGCTTTTCCTTGCAGGAGCGTCAGTTaGGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCG +
Preference number: 6 (lower is better)
Translates to: YAPRAFPCRSVS*GAQCPGRSTLP
Trigger: CGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGGTGCGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS GCA 72 bp GTCTGCAGCAGGAGCTGCGGCGCACGACCCTGGCACTaGTCTTCCGGAATGAAAGACCTGGCGACGGTGGCG +
Preference number: 6 (lower is better)
Translates to: VCSRSCGARPWH*SSGMKDLATVA
Trigger: CGCCACCGTCGCCAGGTCTTTCATTCCGGAAGAGCAGTGCCAGGGTCGTGCGCCGCAGCTCCTGCTGCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000639579.1
CDS CAA 90 bp ACAAGCCGCATACGCACCCAGAGCTTTTCCTTGCAGGAGCGTCAGTaGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGAC +
Preference number: 6 (lower is better)
Translates to: TSRIRTQSFSLQERQ*RGAVPWAFDPPGSD
Trigger: GTCTGAGCCGGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGGTGCGTATGCGGCTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS CAA 90 bp CGCACCCAGGAGGTGACAAGCCGCATACGCACCCAGAGCTTTTCCTaGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGGGCGTTCGAC +
Preference number: 6 (lower is better)
Translates to: RTQEVTSRIRTQSFS*QERQLRGAVPWAFD
Trigger: GTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGGTGCGTATGCGGCTTGTCACCTCCTGGGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS GCA 72 bp GTCGTAGACGGTGAGCACAAGCAGCGCGGCGAAGAGTaGACCCGCGAAGAAAACGAGCTGGCGGGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: VVDGEHKQRGEE*TREENELAGQQ
Trigger: CTGCTGGCCCGCCAGCTCGTTTTCTTCGCGGGTGCACTCTTCGCCGCGCTGCTTGTGCTCACCGTCTACGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000639579.1
CDS GCA 72 bp GCCAGGAGTGGGGCCCTGAGGAGTCGTCTCAGTCAGTaGAAGAGGCCCGGTCAGGCTCCTTCTGGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: ARSGALRSRLSQ*KRPGQAPSGCL
Trigger: CAGACACCCAGAAGGAGCCTGACCGGGCCTCTTGCACTGACTGAGACGACTCCTCAGGGCCCCACTCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000471797.1
ENST00000605952.5
ENST00000639579.1
CDS CCA 72 bp AGGGCTGTCTGCAGCAGGAGCTGCGGCGCACGACCCTaGCACTGCTCTTCCGGAATGAAAGACCTGGCGACG +
Preference number: 6 (lower is better)
Translates to: RAVCSRSCGARP*HCSSGMKDLAT
Trigger: CGTCGCCAGGTCTTTCATTCCGGAAGAGCAGTGCCAGGGTCGTGCGCCGCAGCTCCTGCTGCAGACAGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000639579.1
CDS CAA 72 bp ATACGCACCCAGAGCTTTTCCTTGCAGGAGCGTCAGTaGCGGGGCGCAGTGCCCTGGGCGTTCGACCCTCCC +
Preference number: 6 (lower is better)
Translates to: IRTQSFSLQERQ*RGAVPWAFDPP
Trigger: GGGAGGGTCGAACGCCCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGGTGCGTAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS TCA 72 bp GCCCGGTCAGGCTCCTTCTGGGTGTCTGTGGTCACCTaGAACCCTCCGGGGAACAGATTCCGGGCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: ARSGSFWVSVVT*NPPGNRFRAFW
Trigger: CCAGAAGGCCCGGAATCTGTTCCCCGGAGGGTTTCAGGTGACCACAGACACCCAGAAGGAGCCTGACCGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000469530.4
ENST00000471797.1
ENST00000605952.5
ENST00000611177.1
ENST00000617967.4
ENST00000639579.1
CDS CAA 72 bp GAGGTGACAAGCCGCATACGCACCCAGAGCTTTTCCTaGCAGGAGCGTCAGTTGCGGGGCGCAGTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: EVTSRIRTQSFS*QERQLRGAVPW
Trigger: CCAGGGCACTGCGCCCCGCAACTGACGCTCCTGCAAGGAAAAGCTCTGGGTGCGTATGCGGCTTGTCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS GCA 72 bp GCGCCAGGGAGAACCGCATCAAAGAAAGCTCAGTCTTaGCGTCCTCCGCACGCTGAGACAGCGAGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: APGRTASKKAQS*RPPHAETARPQ
Trigger: CTGAGGCCTCGCTGTCTCAGCGTGCGGAGGACGGCAAGACTGAGCTTTCTTTGATGCGGTTCTCCCTGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000617967.4
ENST00000639579.1
CDS GCA 72 bp CGAAGCCAGGGTACCCTGAGGAGTCGTCTCAGTCAGTaGAAGAGGCCCGGTCAGGCTCCTTCTGGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: RSQGTLRSRLSQ*KRPGQAPSGCL
Trigger: CAGACACCCAGAAGGAGCCTGACCGGGCCTCTTGCACTGACTGAGACGACTCCTCAGGGTACCCTGGCTTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611177.1
ENST00000617967.4
CDS CCA 72 bp CCGACCAGGATCAGCCCCGCTCCTCCCCTCTTGAGGTaGTGCCTTCTCACATCTGTCCAGAGGCTGCAAGGA +
Preference number: 6 (lower is better)
Translates to: PTRISPAPPLLR*CLLTSVQRLQG
Trigger: TCCTTGCAGCCTCTGGACAGATGTGAGAAGGCACCACCTCAAGAGGGGAGGAGCGGGGCTGATCCTGGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS CCA 72 bp TGCAAGAGGCCCGGTCAGGCTCCTTCTGGGTGTCTGTaGTCACCTGAAACCCTCCGGGGAACAGATTCCGGG +
Preference number: 6 (lower is better)
Translates to: CKRPGQAPSGCL*SPETLRGTDSG
Trigger: CCCGGAATCTGTTCCCCGGAGGGTTTCAGGTGACCACAGACACCCAGAAGGAGCCTGACCGGGCCTCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000469530.4
ENST00000471797.1
ENST00000605952.5
ENST00000611177.1
ENST00000617967.4
ENST00000639579.1
CDS CCA 72 bp CCGACCAGGATCAGCCCCGCTCCTCCCCTCTTGAGGTaGTGCCTTCTCACATCTGTCCAGAGGCTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: PTRISPAPPLLR*CLLTSVQRLCS
Trigger: ACTGCACAGCCTCTGGACAGATGTGAGAAGGCACCACCTCAAGAGGGGAGGAGCGGGGCTGATCCTGGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476282.1
ENST00000617967.4
CDS TCA 72 bp ATCAAAGAAAGCTCAGTCTTGCCGTCCTCCGCACGCTaGGACAGCGAGGCCTCAGTCTGTCCCGCCGAGAGC +
Preference number: 6 (lower is better)
Translates to: IKESSVLPSSAR*DSEASVCPAES
Trigger: GCTCTCGGCGGGACAGACTGAGGCCTCGCTGTCTCAGCGTGCGGAGGACGGCAAGACTGAGCTTTCTTTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000469530.4
ENST00000605952.5
ENST00000611177.1
ENST00000617967.4
ENST00000639579.1
CDS CAA 90 bp GGGGCCTGCCTCACTGTCGCCCTTCCATTTAGCTCGGCCTCATCCTaGACCTCTGTCCCCCACCTTGAGGAAACTCGAGGACTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: GACLTVALPFSSASS*TSVPHLEETRGLLP
Trigger: GGGAAGAAGTCCTCGAGTTTCCTCAAGGTGGGGGACAGAGGTCAAGGATGAGGCCGAGCTAAATGGAAGGGCGACAGTGAGGCAGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000617967.4
CDS TCA 72 bp CACCTGGATGTCCCAGTAGCTGAAGAGGTTGCAGACTaGGCGAAGCAGTTGGACCAGCCAGAAGCCGGCAGC +
Preference number: 6 (lower is better)
Translates to: HLDVPVAEEVAD*AKQLDQPEAGS
Trigger: GCTGCCGGCTTCTGGCTGGTCCAACTGCTTCGCTCAGTCTGCAACCTCTTCAGCTACTGGGACATCCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000466157.2
ENST00000469530.4
ENST00000473134.5
ENST00000473409.5
ENST00000605952.5
ENST00000617967.4
ENST00000639579.1
CDS GCA 72 bp GAGGCAATACTGACCCTGAGGAGTCGTCTCAGTCAGTaGAAGAGGCCCGGTCAGGCTCCTTCTGGGTGTCTG +
Preference number: 6 (lower is better)
Translates to: EAILTLRSRLSQ*KRPGQAPSGCL
Trigger: CAGACACCCAGAAGGAGCCTGACCGGGCCTCTTGCACTGACTGAGACGACTCCTCAGGGTCAGTATTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469530.4
CDS GCA 72 bp GTGCACCTGTGGTTGCAGCTACTGGGGAGCAGAGGCTaGAGTGAGCCAATATCACAGCACTGCACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: VHLWLQLLGSRG*SEPISQHCTPA
Trigger: GGCTGGAGTGCAGTGCTGTGATATTGGCTCACTGCAGCCTCTGCTCCCCAGTAGCTGCAACCACAGGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473409.5
CDS TCA 72 bp AAGACATTTTCGGGCTCACGCTGCGCACCCAGGAGGTaGCAAGCCGCATACGCACCCAGAGCTTTTCCTTGC +
Preference number: 6 (lower is better)
Translates to: KTFSGSRCAPRR*QAAYAPRAFPC
Trigger: GCAAGGAAAAGCTCTGGGTGCGTATGCGGCTTGTCACCTCCTGGGTGCGCAGCGTGAGCCCGAAAATGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS GCA 72 bp GCCTTGAGGAAACTCGAGGACTTCTTCCCAGGCAGCTaGTCCAGGACACATTCCAGTTGGGGATGTCTCCCC +
Preference number: 6 (lower is better)
Translates to: ALRKLEDFFPGS*SRTHSSWGCLP
Trigger: GGGGAGACATCCCCAACTGGAATGTGTCCTGGAGCAGCTGCCTGGGAAGAAGTCCTCGAGTTTCCTCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476282.1
CDS CAA 90 bp AGGGCAGGTGTCAATAAGACCTCGCTCTTTCTGCCCTCTTTCCAGTaGGCCCTTCCACCTGTACAGTCCCACTTCTTCCCCTCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: RAGVNKTSLFLPSFQ*ALPPVQSHFFPSPL
Trigger: CAGAGGAGAGGGGAAGAAGTGGGACTGTACAGGTGGAAGGGCCAACTGGAAAGAGGGCAGAAAGAGCGAGGTCTTATTGACACCTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473134.5
CDS GCA 72 bp CCTGCTAAGGTCTCCGAGTCGGGTTCTGATCCACTGTaGTCTTTTCCGACAGGATCAGCAACGCTACCACGA +
Preference number: 6 (lower is better)
Translates to: PAKVSESGSDPL*SFPTGSATLPR
Trigger: TCGTGGTAGCGTTGCTGATCCTGTCGGAAAAGAGCACAGTGGATCAGAACCCGACTCGGAGACCTTAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000404733.2
CDS GCA 72 bp GGCCTAGGGCAGGTGTCAATAAGACCTCGCTCTTTCTaGCCTCTTTCCAGTTGGCCCTTCCACCTGTACAGT +
Preference number: 6 (lower is better)
Translates to: GLGQVSIRPRSF*PLSSWPFHLYS
Trigger: ACTGTACAGGTGGAAGGGCCAACTGGAAAGAGGGCAGAAAGAGCGAGGTCTTATTGACACCTGCCCTAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473134.5
CDS GCA 72 bp TGTGTTTTTCTACTCCACCCTCCAATCTCCTGTGGCTaGCGAAGCCAGGGTACCCTGAGGAGTCGTCTCAGT +
Preference number: 6 (lower is better)
Translates to: CVFLLHPPISCG*RSQGTLRSRLS
Trigger: ACTGAGACGACTCCTCAGGGTACCCTGGCTTCGGCAGCCACAGGAGATTGGAGGGTGGAGTAGAAAAACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611177.1
ENST00000617967.4
CDS CCA 72 bp CGGCTCACCATCAGGCCACGGCTTCTCCAGAAAGGTTaGAAGGATGGGAGCTGTTGTTGCTTCCACAAAGGT +
Preference number: 6 (lower is better)
Translates to: RLTIRPRLLQKG*KDGSCCCFHKG
Trigger: ACCTTTGTGGAAGCAACAACAGCTCCCATCCTTCCAACCTTTCTGGAGAAGCCGTGGCCTGATGGTGAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000473409.5
ENST00000605952.5
ENST00000639579.1
CDS CCA 72 bp CCTTCCCAGGACCTGGGCTATGTCCACATCTGGCAGTaGGGCACTGTCAGATCTCATTTGAAGGCTGCAAAC +
Preference number: 6 (lower is better)
Translates to: PSQDLGYVHIWQ*GTVRSHLKAAN
Trigger: GTTTGCAGCCTTCAAATGAGATCTGACAGTGCCCCACTGCCAGATGTGGACATAGCCCAGGTCCTGGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473409.5
CDS CCA 72 bp CAAAGGGCCATCAGGCCACGGCTTCTCCAGAAAGGTTaGAAGGATGGGAGCTGTTGTTGCTTCCACAAAGGT +
Preference number: 6 (lower is better)
Translates to: QRAIRPRLLQKG*KDGSCCCFHKG
Trigger: ACCTTTGTGGAAGCAACAACAGCTCCCATCCTTCCAACCTTTCTGGAGAAGCCGTGGCCTGATGGCCCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466157.2
CDS CAA 90 bp CTGGGCTATGTCCACATCTGGCAGTGGGGCACTGTCAGATCTCATTaGAAGGCTGCAAACCTCACTTCAGCCCAGTTTCACTCAGCTTTC +
Preference number: 6 (lower is better)
Translates to: LGYVHIWQWGTVRSH*KAANLTSAQFHSAF
Trigger: GAAAGCTGAGTGAAACTGGGCTGAAGTGAGGTTTGCAGCCTTCAAATGAGATCTGACAGTGCCCCACTGCCAGATGTGGACATAGCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473409.5
CDS TCA 72 bp TCCACATCTGGCAGTGGGGCACTGTCAGATCTCATTTaGAGGCTGCAAACCTCACTTCAGCCCAGTTTCACT +
Preference number: 6 (lower is better)
Translates to: STSGSGALSDLI*RLQTSLQPSFT
Trigger: AGTGAAACTGGGCTGAAGTGAGGTTTGCAGCCTTCAAATGAGATCTGACAGTGCCCCACTGCCAGATGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473409.5