RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATG9A (Homo sapiens)

Ensembl gene IDs: ENSG00000198925

Ensembl transcript IDs: ENST00000361242.9, ENST00000396761.6, ENST00000409033.7, ENST00000409422.5, ENST00000409618.5, ENST00000412355.5, ENST00000428226.5, ENST00000429920.1, ENST00000431715.5, ENST00000432520.5, ENST00000434939.1, ENST00000436856.5, ENST00000439812.5, ENST00000443140.5, ENST00000455079.5, ENST00000456708.5, ENST00000457841.5, ENST00000466217.5, ENST00000475339.1, ENST00000486766.2, ENST00000488833.1

Found 805 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCATCCACCCCAGAGCCTGTCATGGTGCTGTGAGCCCGGCCTGTaGGCGCCTGCCCGGGTTGCAGCGGGGAGAAGGAGCGCAGGGCAG +
Preference number: 1 (lower is better)
Translates to: WHPPQSLSWCCEPGL*APARVAAGRRSAGQ
Trigger: CTGCCCTGCGCTCCTTCTCCCCGCTGCAACCCGGGCAGGCGCCCACAGGCCGGGCTCACAGCACCATGACAGGCTCTGGGGTGGATGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR CCA 90 bp GCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGCAGACGGGATaGCAGGGCAGCGGTGGCCTCCATCCTGGGCCACAGGAACCCTGC +
Preference number: 1 (lower is better)
Translates to: AREHSEEPSHGRQTG*QGSGGLHPGPQEPC
Trigger: GCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCGCTGCCCTGCCATCCCGTCTGCCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR GCA 90 bp GGGGGTAGCTCATCCTCCGAGCCCTCTTCGGGCACGGGCTCAGGGTaGCTTGATGCCGACTGCCCATCTTCTGCCCACCCTCCAAGAGGC +
Preference number: 1 (lower is better)
Translates to: GGSSSSEPSSGTGSG*LDADCPSSAHPPRG
Trigger: GCCTCTTGGAGGGTGGGCAGAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCCGTGCCCGAAGAGGGCTCGGAGGATGAGCTACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR TCA 90 bp GCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTaGGGTAAGGGCCACAGCCTGACCTGCTCATCTATTGAGGGGGCT +
Preference number: 1 (lower is better)
Translates to: AERGEPAAALGENCG*GKGHSLTCSSIEGA
Trigger: AGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCCCTTACCTCACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR GCA 90 bp GGGGCGCTTTCTCCACTCTCATCACTCTCCCGGCGGTGCCATACATaGCGCTCAGGTTCAGCCTGGGCCTGCTGCTTGTGGAGCTGGTGC +
Preference number: 1 (lower is better)
Translates to: GALSPLSSLSRRCHT*RSGSAWACCLWSWC
Trigger: GCACCAGCTCCACAAGCAGCAGGCCCAGGCTGAACCTGAGCGGCATGTATGGCACCGCCGGGAGAGTGATGAGAGTGGAGAAAGCGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR CCA 90 bp ATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTaGGACGCACACAGCCAAGGTCACCCTCCAGCCCGGTCTGTCCCA +
Preference number: 1 (lower is better)
Translates to: IPLQGTARCGPELFC*DAHSQGHPPARSVP
Trigger: TGGGACAGACCGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR GCA 90 bp GTCCAGGCCCAACCTCCCCACTCCACAGTTGGCACAGGTTCTCCCTaGTTGGCAGCTTCTATCGTGGGCAGCCCTCTGGGGACTTGCAGG +
Preference number: 1 (lower is better)
Translates to: VQAQPPHSTVGTGSP*LAASIVGSPLGTCR
Trigger: CCTGCAAGTCCCCAGAGGGCTGCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGAGGTTGGGCCTGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR GCA 90 bp TTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTaGTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGGTCTGTC +
Preference number: 1 (lower is better)
Translates to: FIPLQGTARCGPELF*WDAHSQGHPPARSV
Trigger: GACAGACCGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR CCA 90 bp GTTGCAGGGGTTGAGGGTCCAGGCCCAACCTCCCCACTCCACAGTTaGCACAGGTTCTCCCTGCTTGGCAGCTTCTATCGTGGGCAGCCC +
Preference number: 1 (lower is better)
Translates to: VAGVEGPGPTSPLHS*HRFSLLGSFYRGQP
Trigger: GGGCTGCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGAGGTTGGGCCTGGACCCTCAACCCCTGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR GCA 90 bp CATATTCTGACAGCACCAGGCTCTGCAGCTGTCCTTCCCACACGCTaGTCCCGGAGCTGGCTGTCCTGGCATCCACCCCAGAGCCTGTCA +
Preference number: 1 (lower is better)
Translates to: HILTAPGSAAVLPTR*SRSWLSWHPPQSLS
Trigger: TGACAGGCTCTGGGGTGGATGCCAGGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGCCTGGTGCTGTCAGAATATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR GCA 90 bp CCTTCATCAGGGGCGCTTTCTCCACTCTCATCACTCTCCCGGCGGTaGCATACATGCCGCTCAGGTTCAGCCTGGGCCTGCTGCTTGTGG +
Preference number: 1 (lower is better)
Translates to: PSSGALSPLSSLSRR*HTCRSGSAWACCLW
Trigger: CCACAAGCAGCAGGCCCAGGCTGAACCTGAGCGGCATGTATGGCACCGCCGGGAGAGTGATGAGAGTGGAGAAAGCGCCCCTGATGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR TCA 90 bp CTGCAGCACTGGGCGAGAACTGCGGGTGAGGTAAGGGCCACAGCCTaGCCTGCTCATCTATTGAGGGGGCTAGGGAAGGTTGCAGGGGTT +
Preference number: 1 (lower is better)
Translates to: LQHWARTAGEVRATA*PAHLLRGLGKVAGV
Trigger: AACCCCTGCAACCTTCCCTAGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCCCTTACCTCACCCGCAGTTCTCGCCCAGTGCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR TCA 90 bp GACTGCCCATCTTCTGCCCACCCTCCAAGAGGCAGCCGAGAGAAATaGGAGGGAACCCTGGGCACTGTGCCAGGATCTGTGATGCCACCG +
Preference number: 1 (lower is better)
Translates to: DCPSSAHPPRGSREK*EGTLGTVPGSVMPP
Trigger: CGGTGGCATCACAGATCCTGGCACAGTGCCCAGGGTTCCCTCTCATTTCTCTCGGCTGCCTCTTGGAGGGTGGGCAGAAGATGGGCAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR GCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTaGAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGA +
Preference number: 1 (lower is better)
Translates to: QANRTGASSTHRPVM*KKRREVSRLQHWAR
Trigger: TCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR CCA 90 bp ACTCCACAGTTGGCACAGGTTCTCCCTGCTTGGCAGCTTCTATCGTaGGCAGCCCTCTGGGGACTTGCAGGGGTAGGTGTAAAGGTGGCA +
Preference number: 1 (lower is better)
Translates to: TPQLAQVLPAWQLLS*AALWGLAGVGVKVA
Trigger: TGCCACCTTTACACCTACCCCTGCAAGTCCCCAGAGGGCTGCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTGTGCCAACTGTGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR TCA 90 bp GTGCATATAGAGGGCATGCAGGCTCATCTCTGTGGATGCATATTCTaGCAGCACCAGGCTCTGCAGCTGTCCTTCCCACACGCTGCTCCC +
Preference number: 1 (lower is better)
Translates to: VHIEGMQAHLCGCIF*QHQALQLSFPHAAP
Trigger: GGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGCCTGGTGCTGTCAGAATATGCATCCACAGAGATGAGCCTGCATGCCCTCTATATGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR GCA 90 bp TGCTCCTTGAGGAAGCCTAGGAAGGCTGTGCTCTCACGTGGTGGCTaGCAGCCAGGGTTGGTGATGGCAAAGTGCATGAGTGACAACTCT +
Preference number: 1 (lower is better)
Translates to: CSLRKPRKAVLSRGG*QPGLVMAKCMSDNS
Trigger: AGAGTTGTCACTCATGCACTTTGCCATCACCAACCCTGGCTGGCAGCCACCACGTGAGAGCACAGCCTTCCTAGGCTTCCTCAAGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR CCA 90 bp AGGGCCCAGGAAGACCTCAGTCTCCTGGGGGCCCATCCTAAAAGATaGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGA +
Preference number: 1 (lower is better)
Translates to: RAQEDLSLLGAHPKR*QGQQSISILLLQFR
Trigger: TCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCATCTTTTAGGATGGGCCCCCAGGAGACTGAGGTCTTCCTGGGCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGCGCTGCTCCCGGAGCTaGCTGTCCTGGCATCCACCC +
Preference number: 2 (lower is better)
Translates to: QPKASGEASPFIPLQGTARCSRS*LSWHPP
Trigger: GGGTGGATGCCAGGACAGCCAGCTCCGGGAGCAGCG...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp TGCAGCGGGGAGAAGGAGCGCAGGGCAGAGGCGACTTCAGCCCTGTGCCTGGAGCGGTGGCCTCCATCCTaGGCCACAGGAACCCTGCTC +
Preference number: 2 (lower is better)
Translates to: CSGEKERRAEATSALCLERWPPS*ATGTLL
Trigger: GAGCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCG...CTCCAGGCACAGGGCTGAAGTCGCCTCTGCCCTGCGCTCCTTCTCCCCGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCAGAGGAGCCGTCCCATaGCAGGCAGACGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGRGAVP*QADGMA
Trigger: TGCCATCCCGTCTGCCTGCCATGGGACGGCTCCTCT...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCCTCTCCTGGGGCTGTaGCAAGCCCAGTGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGPLLGL*QAQCWH
Trigger: GTGCCAACACTGGGCTTGCCACAGCCCCAGGAGAGG...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACAGCCCTGCAGGTCTCTaGGCAGTGGAGGGCCCCGGC +
Preference number: 2 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDSPAGL*AVEGPG
Trigger: GCCGGGGCCCTCCACTGCCCAGAGACCTGCAGGGCT...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACTGTGAGCCCGGCCTGTaGGCGCCTGCCCGGGTTGCA +
Preference number: 2 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDCEPGL*APARVA
Trigger: TGCAACCCGGGCAGGCGCCCACAGGCCGGGCTCACA...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCAGAGGAGCCGTCCCATaGCAGGCAGACGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: VQQPKASGEASPFIPLQGRGAVP*QADGMA
Trigger: TGCCATCCCGTCTGCCTGCCATGGGACGGCTCCTCT...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR CAA 90 bp GTAGCTCATCCTCCGAGCCCTCTTCGGGCACGGGCTCAGGGTGCCTaGATGCCGACTGCCCATCTTCTGCCCACCCTCCAAGAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: VAHPPSPLRARAQGA*MPTAHLLPTLQEAA
Trigger: GGCTGCCTCTTGGAGGGTGGGCAGAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCCGTGCCCGAAGAGGGCTCGGAGGATGAGCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR TCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTAGAAGCGGAGAGAGGTaGGCCGGCTGCAGCACTGGG +
Preference number: 2 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSRSGER*AGCSTG
Trigger: CCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCT...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCAGCCTAGGAAGGCTGTaGTCTCACGTGGTGGCTGCC +
Preference number: 2 (lower is better)
Translates to: VQQPKASGEASPFIPLQGSLGRL*SHVVAA
Trigger: GGCAGCCACCACGTGAGAGCACAGCCTTCCTAGGCT...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR GCA 90 bp CTTCGGGCACGGGCTCAGGGTGCCTTGATGCCGACTGCCCATCTTCTGCCCACCCAGAGCCTGTCATGGTaGTGTGAGCCCGGCCTGTGG +
Preference number: 2 (lower is better)
Translates to: LRARAQGALMPTAHLLPTQSLSW*CEPGLW
Trigger: CCACAGGCCGGGCTCACAGCACCATGACAGGCTCTG...GGTGGGCAGAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCCGTGCCCGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR GCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACGGCACGGGCTCAGGGTaGCTTGATGCCGACTGCCCA +
Preference number: 2 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDGTGSG*LDADCP
Trigger: TGGGCAGTCGGCATCAAGGCACCCTGAGCCCGTGCC...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp AGGCTCTGCAGCTGTCCTTCCCACACGCTGCTCCCGGAGCTGGCTGTCCTGGCACCTCTCCTGGGGCTGTaGCAAGCCCAGTGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: RLCSCPSHTLLPELAVLAPLLGL*QAQCWH
Trigger: GTGCCAACACTGGGCTTGCCACAGCCCCAGGAGAGG...TGCCAGGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp AGGCTCTGCAGCTGTCCTTCCCACACGCTGCTCCCGGAGCTGGCTGTCCTGGCATCGTGGGCAGCCCTCTaGGGACTTGCAGGGGTAGGT +
Preference number: 2 (lower is better)
Translates to: RLCSCPSHTLLPELAVLASWAAL*GLAGVG
Trigger: ACCTACCCCTGCAAGTCCCCAGAGGGCTGCCCACGA...TGCCAGGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp ACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCAGCCGGCTGCAGCACTaGGCGAGAACTGCGGGTGAG +
Preference number: 2 (lower is better)
Translates to: TVPTLLRSEFGQRNSPLSSRLQH*ARTAGE
Trigger: CTCACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCT...GGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGCCGGCTGCAGCACTaGGCGAGAACTGCGGGTGAG +
Preference number: 2 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHSRLQH*ARTAGE
Trigger: CTCACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCT...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGCGTTGAGGGGAGCTaGACGCTAGGGTCTTCACCC +
Preference number: 2 (lower is better)
Translates to: QPKASGEASPFIPLQGTASVEGS*TLGSSP
Trigger: GGGTGAAGACCCTAGCGTCCAGCTCCCCTCAACGCT...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGTGTGCTCTCACGTGGTaGCTGCCAGCCAGGGTTGGT +
Preference number: 2 (lower is better)
Translates to: QPKASGEASPFIPLQGTACALTW*LPARVG
Trigger: ACCAACCCTGGCTGGCAGCCACCACGTGAGAGCACA...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGGGCTGTGCTCTCACGTaGTGGCTGCCAGCCAGGGTT +
Preference number: 2 (lower is better)
Translates to: RARALLLGRTQPRSPSSPGCALT*WLPARV
Trigger: AACCCTGGCTGGCAGCCACCACGTGAGAGCACAGCC...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGAGCAGACCCCCTTaGGCGAGGCTAGCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSGSRPP*ARLAAA
Trigger: AGCAGCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCC...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR TCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCATCTAGCACCACACTCTaGGCCAAGGGGGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSSSTTL*AKGVLG
Trigger: CCCCAGGACCCCCTTGGCTCAGAGTGTGGTGCTAGA...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR TCA 90 bp CCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACATCTAGCACCACACTCTaGGCCAAGGGGGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: PPSGHSEMRARALLLGRTSSTTL*AKGVLG
Trigger: CCCCAGGACCCCCTTGGCTCAGAGTGTGGTGCTAGA...TGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR TCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGGCACACACAGGCCAGTaGTGTGCAAGAAGCGGAGAG +
Preference number: 2 (lower is better)
Translates to: QPKASGEASPFIPLQGTAAHTGQ*CARSGE
Trigger: CTCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGC...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR TCA 90 bp GGCCTCCATCCTGGGCCACAGGAACCCTGCTCAGCCTTGTCTATACCTTGTGCACCTGTCATGGTGCTGTaGGCCCGGCCTGTGGGCGCC +
Preference number: 2 (lower is better)
Translates to: GLHPGPQEPCSALSIPCAPVMVL*ARPVGA
Trigger: GGCGCCCACAGGCCGGGCTCACAGCACCATGACAGG...TGCACAAGGTATAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR TCA 90 bp ACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCGGGCTCAGGGTGCCTTaGTGCCGACTGCCCATCTTC +
Preference number: 2 (lower is better)
Translates to: TVPTLLRSEFGQRNSPLSGLRVP*CRLPIF
Trigger: GAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCC...GGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR GCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGTCCTTCCCACACGCTaGTCCCGGAGCTGGCTGTCC +
Preference number: 2 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTVLPTR*SRSWLS
Trigger: GGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGAC...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACACGGTGGCCTCCATCCTaGGCCACAGGAACCCTGCTC +
Preference number: 2 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTRWPPS*ATGTLL
Trigger: GAGCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCG...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCCGGTGGCCTCCATCCTaGGCCACAGGAACCCTGCTC +
Preference number: 2 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVRWPPS*ATGTLL
Trigger: GAGCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCG...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAATGGCAGGGCAGCGGTaGCCTCCATCCTGGGCCACA +
Preference number: 2 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQMAGQR*PPSWAT
Trigger: TGTGGCCCAGGATGGAGGCCACCGCTGCCCTGCCAT...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCTGTTGGCACCTCCCTTaGCCAGGCACAGACACACAA +
Preference number: 2 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGCWHLP*PGTDTQ
Trigger: TTGTGTGTCTGTGCCTGGCCAAGGGAGGTGCCAACA...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCCCTCTCCTGGGGCTGTaGCAAGCCCAGTGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: HHTLSQGGPGDEARVPCAPLLGL*QAQCWH
Trigger: GTGCCAACACTGGGCTTGCCACAGCCCCAGGAGAGG...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR CAA 90 bp CTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTaGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGGTCTGT +
Preference number: 2 (lower is better)
Translates to: LHPPSGHSEMRARAL*LGRTQPRSPSSPVC
Trigger: ACAGACCGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR TCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCAGGGCCCCGGCAGGATaGGCCAGCTACCACATTTGC +
Preference number: 2 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVRAPAG*ASYHIC
Trigger: GCAAATGTGGTAGCTGGCTCATCCTGCCGGGGCCCT...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR GCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTCTCTCACGTGGTGGCTaGCAGCCAGGGTTGGTGATG +
Preference number: 2 (lower is better)
Translates to: CKKRREVSRLQHWARTAGLSRGG*QPGLVM
Trigger: CATCACCAACCCTGGCTGGCAGCCACCACGTGAGAG...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR GCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCGGCGAGGCTAGCAGCTaGTCCATCCCGCTGAACCTG +
Preference number: 2 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVGEASS*SIPLNL
Trigger: CAGGTTCAGCGGGATGGAGCAGCTGCTAGCCTCGCC...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR GCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCATCCAGGCCGGGGTGCTaGACAGGGATAGCTAGCAGA +
Preference number: 2 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSSRPGC*TGIASR
Trigger: TCTGCTAGCTATCCCTGTGCAGCACCCCGGCCTGGA...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp GTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTAGAGGAGCCGTCCCATaGCAGGCAGACGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: VHGPYPAPLRVRAAQFTTRGAVP*QADGMA
Trigger: TGCCATCCCGTCTGCCTGCCATGGGACGGCTCCTCT...AGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCCCTCTCCTGGGGCTGTaGCAAGCCCAGTGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVPLLGL*QAQCWH
Trigger: GTGCCAACACTGGGCTTGCCACAGCCCCAGGAGAGG...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACTGGCAGTACTGGGGCTaGGCTGGGGGCCAGTTTCTA +
Preference number: 2 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDWQYWG*AGGQFL
Trigger: TAGAAACTGGCCCCCAGCCCAGCCCCAGTACTGCCA...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACAAGCGTTGAGGGGAGCTaGACGCTAGGGTCTTCACCC +
Preference number: 2 (lower is better)
Translates to: PPSGHSEMRARALLLGRTSVEGS*TLGSSP
Trigger: GGGTGAAGACCCTAGCGTCCAGCTCCCCTCAACGCT...TGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAAGCGTTGAGGGGAGCTaGACGCTAGGGTCTTCACCC +
Preference number: 2 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSSVEGS*TLGSSP
Trigger: GGGTGAAGACCCTAGCGTCCAGCTCCCCTCAACGCT...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGCCAGAGCTCTTTTGCTaGGACGCACACAGCCAAGGT +
Preference number: 2 (lower is better)
Translates to: QPKASGEASPFIPLQGTAPELFC*DAHSQG
Trigger: ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGG...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR TCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCTGCTCCATCCCGCTaGACCTGCTCCTTGAGGAAG +
Preference number: 2 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTAAPSR*TCSLRK
Trigger: CTTCCTCAAGGAGCAGGTTCAGCGGGATGGAGCAGC...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR GCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACGGCCACAGCCTGACCTaGTCATCTATTGAGGGGGCT +
Preference number: 2 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDGHSLT*SSIEGA
Trigger: AGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGGAGCAGTCCCAGCATaGAGTGCAGCAGCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTGAVPA*SAAAQS
Trigger: GCTTTGGGCTGCTGCACTGCATGCTGGGACTGCTCC...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCTGGCAGTACTGGGGCTaGGCTGGGGGCCAGTTTCTA +
Preference number: 2 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVWQYWG*AGGQFL
Trigger: TAGAAACTGGCCCCCAGCCCAGCCCCAGTACTGCCA...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp ACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCTGGCAGCTTCTATCGTaGGCAGCCCTCTGGGGACTT +
Preference number: 2 (lower is better)
Translates to: TVPTLLRSEFGQRNSPLSWQLLS*AALWGL
Trigger: AAGTCCCCAGAGGGCTGCCCACGATAGAAGCTGCCA...GGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCATGGCAGCTTCTATCGTaGGCAGCCCTCTGGGGACTT +
Preference number: 2 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSWQLLS*AALWGL
Trigger: AAGTCCCCAGAGGGCTGCCCACGATAGAAGCTGCCA...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGCAGGTTCTCCCTGCTTaGCAGCTTCTATCGTGGGCA +
Preference number: 2 (lower is better)
Translates to: RARALLLGRTQPRSPSSPQVLPA*QLLSWA
Trigger: TGCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTG...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGCCCCAGAGCCTGTCATaGTGCTGTGAGCCCGGCCTG +
Preference number: 2 (lower is better)
Translates to: TEREQANRTGASSTHRPVPQSLS*CCEPGL
Trigger: CAGGCCGGGCTCACAGCACCATGACAGGCTCTGGGG...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR TCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGTAAGGGCCACAGCCTaGCCTGCTCATCTATTGAGG +
Preference number: 2 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSVRATA*PAHLLR
Trigger: CCTCAATAGATGAGCAGGTCAGGCTGTGGCCCTTAC...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGCCCTCTGGGGACTTaGAGGGGTAGGTGTAAAGGT +
Preference number: 2 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHSPLGT*RGRCKG
Trigger: ACCTTTACACCTACCCCTGCAAGTCCCCAGAGGGCT...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp GTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTGGCCACAGCCTGACCTaGTCATCTATTGAGGGGGCT +
Preference number: 2 (lower is better)
Translates to: VHGPYPAPLRVRAAQFTTGHSLT*SSIEGA
Trigger: AGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC...AGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACCACAGGCCAGTGATGTaGAAGAAGCGGAGAGAGGTG +
Preference number: 2 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHHRPVM*KKRREV
Trigger: CACCTCTCTCCGCTTCTTGCACATCACTGGCCTGTG...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACGCCAGCTACCACATTTaGGATAAGGCTCAGGGGCTC +
Preference number: 2 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDASYHI*DKAQGL
Trigger: GAGCCCCTGAGCCTTATCGCAAATGTGGTAGCTGGC...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTCAAACACCACACACGTaGGGCCAGGGAACACTCAGA +
Preference number: 2 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSQTPHT*GQGTLR
Trigger: TCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTTG...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGTGTTGGCACCTCCCTTaGCCAGGCACAGACACACAA +
Preference number: 2 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWCWHLP*PGTDTQ
Trigger: TTGTGTGTCTGTGCCTGGCCAAGGGAGGTGCCAACA...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGTCGTGGGCAGCCCTCTaGGGACTTGCAGGGGTAGGT +
Preference number: 2 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLSWAAL*GLAGVG
Trigger: ACCTACCCCTGCAAGTCCCCAGAGGGCTGCCCACGA...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAATGGCAGCTTCTATCGTaGGCAGCCCTCTGGGGACTT +
Preference number: 2 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQWQLLS*AALWGL
Trigger: AAGTCCCCAGAGGGCTGCCCACGATAGAAGCTGCCA...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCAGGTTCTCCCTGCTTaGCAGCTTCTATCGTGGGCA +
Preference number: 2 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDQVLPA*QLLSWA
Trigger: TGCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTG...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp AGGGCAGCGGTGGCCTCCATCCTGGGCCACAGGAACCCTGCTCAGCCTTGTCTACAGGTTCTCCCTGCTTaGCAGCTTCTATCGTGGGCA +
Preference number: 2 (lower is better)
Translates to: RAAVASILGHRNPAQPCLQVLPA*QLLSWA
Trigger: TGCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTG...TAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCGCTGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTCCCCACTCCACAGTTaGCACAGGTTCTCCCTGCTT +
Preference number: 2 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSSPLHS*HRFSLL
Trigger: AAGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGA...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACATCCCCACTCCACAGTTaGCACAGGTTCTCCCTGCTT +
Preference number: 2 (lower is better)
Translates to: PPSGHSEMRARALLLGRTSPLHS*HRFSLL
Trigger: AAGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGA...TGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGAGCCGGCTGCAGCACTaGGCGAGAACTGCGGGTGAG +
Preference number: 2 (lower is better)
Translates to: ELDARVFTLTQSKSRTERSRLQH*ARTAGE
Trigger: CTCACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCT...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCAAGACCTCAGTCTCCTaGGGGCCCATCCTAAAAGAT +
Preference number: 2 (lower is better)
Translates to: VQQPKASGEASPFIPLQGKTSVS*GPILKD
Trigger: ATCTTTTAGGATGGGCCCCCAGGAGACTGAGGTCTT...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR TCA 90 bp AGGGCAGCGGTGGCCTCCATCCTGGGCCACAGGAACCCTGCTCAGCCTTGTCTATACGATAAGCAGCAATaGGGGCCCAGGAAGACCTCA +
Preference number: 2 (lower is better)
Translates to: RAAVASILGHRNPAQPCLYDKQQ*GPRKTS
Trigger: TGAGGTCTTCCTGGGCCCTCATTGCTGCTTATCGTA...TAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCGCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR GCA 90 bp GTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTAGCCCTCTGGGGACTTaGAGGGGTAGGTGTAAAGGT +
Preference number: 2 (lower is better)
Translates to: VHGPYPAPLRVRAAQFTTSPLGT*RGRCKG
Trigger: ACCTTTACACCTACCCCTGCAAGTCCCCAGAGGGCT...AGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGAGCAGTCCCAGCATaGAGTGCAGCAGCCCAAAGC +
Preference number: 2 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLGAVPA*SAAAQS
Trigger: GCTTTGGGCTGCTGCACTGCATGCTGGGACTGCTCC...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGAGAGGAGCCGTCCCATaGCAGGCAGACGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: ELDARVFTLTQSKSRTERRGAVP*QADGMA
Trigger: TGCCATCCCGTCTGCCTGCCATGGGACGGCTCCTCT...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAACAGGTTCTCCCTGCTTaGCAGCTTCTATCGTGGGCA +
Preference number: 2 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQQVLPA*QLLSWA
Trigger: TGCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTG...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp TCCATCCTGGGCCACAGGAACCCTGCTCAGCCTTGTCTATACCTTGTGCACCTGCGCTCAGGTTCAGCCTaGGCCTGCTGCTTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: SILGHRNPAQPCLYLVHLRSGSA*ACCLWS
Trigger: GCTCCACAAGCAGCAGGCCCAGGCTGAACCTGAGCG...CAGGTGCACAAGGTATAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR CAA 90 bp GGACTGGATAGACGTAAAGAGGGCATTTTCAGGGAGCAGACCCCCTaGGGCGAGGCTAGCAGCTGCTCCATCCCGCTGAACCTGCTCCTT +
Preference number: 2 (lower is better)
Translates to: GLDRRKEGIFREQTP*GEASSCSIPLNLLL
Trigger: AAGGAGCAGGTTCAGCGGGATGGAGCAGCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCCTGAAAATGCCCTCTTTACGTCTATCCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR TCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCATCTAGCACCACACTCTaGGCCAAGGGGGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: RKAKAERNGSKRTEQEQASSTTL*AKGVLG
Trigger: CCCCAGGACCCCCTTGGCTCAGAGTGTGGTGCTAGA...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGGGGCCAGAGCTCTTTTaGTGGGACGCACACAGCCAA +
Preference number: 2 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQGPELF*WDAHSQ
Trigger: TTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCC...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCCAGAGCTCTTTTaGTGGGACGCACACAGCCAA +
Preference number: 2 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLGPELF*WDAHSQ
Trigger: TTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCC...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCGGTGGCCTCCATCCTaGGCCACAGGAACCCTGCTC +
Preference number: 2 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKRWPPS*ATGTLL
Trigger: GAGCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCG...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GGCCACAGCCTGACCTGCTCATCTATTGAGGGGGCTAGGGAAGGTTGCAGGGGTCAAACACCACACACGTaGGGCCAGGGAACACTCAGA +
Preference number: 2 (lower is better)
Translates to: GHSLTCSSIEGAREGCRGQTPHT*GQGTLR
Trigger: TCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTTG...ACCCCTGCAACCTTCCCTAGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGTGGCAGTACTGGGGCTaGGCTGGGGGCCAGTTTCTA +
Preference number: 2 (lower is better)
Translates to: LDARVFTLTQSKSRTEREWQYWG*AGGQFL
Trigger: TAGAAACTGGCCCCCAGCCCAGCCCCAGTACTGCCA...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCGCCCATCCTAAAAGATaGCAAGGGCAGCAAAGTATT +
Preference number: 2 (lower is better)
Translates to: VQQPKASGEASPFIPLQGAHPKR*QGQQSI
Trigger: AATACTTTGCTGCCCTTGCCATCTTTTAGGATGGGC...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGGCCCATCCTAAAAGATaGCAAGGGCAGCAAAGTATT +
Preference number: 2 (lower is better)
Translates to: QPKASGEASPFIPLQGTAAHPKR*QGQQSI
Trigger: AATACTTTGCTGCCCTTGCCATCTTTTAGGATGGGC...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTAAGACCTCAGTCTCCTaGGGGCCCATCCTAAAAGAT +
Preference number: 2 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSKTSVS*GPILKD
Trigger: ATCTTTTAGGATGGGCCCCCAGGAGACTGAGGTCTT...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR TCA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGTCTAGCACCACACTCTaGGCCAAGGGGGTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKSSTTL*AKGVLG
Trigger: CCCCAGGACCCCCTTGGCTCAGAGTGTGGTGCTAGA...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGGGCACAGGTTCTCCCTaGTTGGCAGCTTCTATCGTG +
Preference number: 2 (lower is better)
Translates to: TEREQANRTGASSTHRPVGTGSP*LAASIV
Trigger: CACGATAGAAGCTGCCAAGCAGGGAGAACCTGTGCC...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGGCCACAGCCTGACCTaGTCATCTATTGAGGGGGCT +
Preference number: 2 (lower is better)
Translates to: ELDARVFTLTQSKSRTERGHSLT*SSIEGA
Trigger: AGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCATCACTCTCCCGGCGGTaGCATACATGCCGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: RKAKAERNGSKRTEQEQASLSRR*HTCRSG
Trigger: ACCTGAGCGGCATGTATGGCACCGCCGGGAGAGTGA...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGTTGGCACCTCCCTTaGCCAGGCACAGACACACAA +
Preference number: 2 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQCWHLP*PGTDTQ
Trigger: TTGTGTGTCTGTGCCTGGCCAAGGGAGGTGCCAACA...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGTGGCAGCTTCTATCGTaGGCAGCCCTCTGGGGACTT +
Preference number: 2 (lower is better)
Translates to: ELDARVFTLTQSKSRTERWQLLS*AALWGL
Trigger: AAGTCCCCAGAGGGCTGCCCACGATAGAAGCTGCCA...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR TCA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTGGCAAAGTGCATGAGTaGCAACTCTGTCTTTCCATC +
Preference number: 2 (lower is better)
Translates to: GTARCGPELFCWDAHSQGGKVHE*QLCLSI
Trigger: GATGGAAAGACAGAGTTGTCACTCATGCACTTTGCC...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR GCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTTTGGTGATGGCAAAGTaGATGAGTGACAACTCTGTC +
Preference number: 2 (lower is better)
Translates to: CKKRREVSRLQHWARTAGLVMAK*MSDNSV
Trigger: GACAGAGTTGTCACTCATGCACTTTGCCATCACCAA...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR GCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCATCAGCCTGGGCCTGCTaGTTGTGGAGCTGGTGCATA +
Preference number: 2 (lower is better)
Translates to: RKAKAERNGSKRTEQEQASAWAC*LWSWCI
Trigger: TATGCACCAGCTCCACAAGCAGCAGGCCCAGGCTGA...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCTCGTGGGCAGCCCTCTaGGGACTTGCAGGGGTAGGT +
Preference number: 2 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFSWAAL*GLAGVG
Trigger: ACCTACCCCTGCAAGTCCCCAGAGGGCTGCCCACGA...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGTCCCCACTCCACAGTTaGCACAGGTTCTCCCTGCTT +
Preference number: 2 (lower is better)
Translates to: LDARVFTLTQSKSRTERESPLHS*HRFSLL
Trigger: AAGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGA...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp AACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGAGAGGCCACAGCCTGACCTaGTCATCTATTGAGGGGGCT +
Preference number: 2 (lower is better)
Translates to: NRTGASSTHRPVMCKKRRGHSLT*SSIEGA
Trigger: AGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC...TCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCAAAGTATTTCCATCCTaGTCCTACAATTTAGAAACC +
Preference number: 2 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGKVFPS*SYNLET
Trigger: GGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTT...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTGCCCATCCTAAAAGATaGCAAGGGCAGCAAAGTATT +
Preference number: 2 (lower is better)
Translates to: GTARCGPELFCWDAHSQGAHPKR*QGQQSI
Trigger: AATACTTTGCTGCCCTTGCCATCTTTTAGGATGGGC...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACTCAGATTGTAAGGACTaGATAGACGTAAAGAGGGCA +
Preference number: 2 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDSDCKD*IDVKRA
Trigger: TGCCCTCTTTACGTCTATCCAGTCCTTACAATCTGA...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR TCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGCACACACAGGCCAGTaGTGTGCAAGAAGCGGAGAG +
Preference number: 2 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFAHTGQ*CARSGE
Trigger: CTCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGC...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGGGCACAGGTTCTCCCTaGTTGGCAGCTTCTATCGTG +
Preference number: 2 (lower is better)
Translates to: QANRTGASSTHRPVMCKKGTGSP*LAASIV
Trigger: CACGATAGAAGCTGCCAAGCAGGGAGAACCTGTGCC...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCACAGGCCAGTGATGTaGAAGAAGCGGAGAGAGGTG +
Preference number: 2 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKHRPVM*KKRREV
Trigger: CACCTCTCTCCGCTTCTTGCACATCACTGGCCTGTG...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCAAACACCACACACGTaGGGCCAGGGAACACTCAGA +
Preference number: 2 (lower is better)
Translates to: QANRTGASSTHRPVMCKKQTPHT*GQGTLR
Trigger: TCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTTG...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACAAAGTATTTCCATCCTaGTCCTACAATTTAGAAACC +
Preference number: 2 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDKVFPS*SYNLET
Trigger: GGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTT...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTCGTGGGCAGCCCTCTaGGGACTTGCAGGGGTAGGT +
Preference number: 2 (lower is better)
Translates to: WQGQQSISILLLQFRNLLSWAAL*GLAGVG
Trigger: ACCTACCCCTGCAAGTCCCCAGAGGGCTGCCCACGA...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp CCAGAAGACACCAGCAATGACCAGGATGGTGATAAGGGAGCCATTTTCCTGAATAGGCAAAAAGGCGTCTaGCAGAGTGACCTTGACGGG +
Preference number: 2 (lower is better)
Translates to: PEDTSNDQDGDKGAIFLNRQKGV*QSDLDG
Trigger: CCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCT...ATTCAGGAAAATGGCTCCCTTATCACCATCCTGGTCATTGCTGGTGTCTTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412355.5
3UTR-3UTR TCA 90 bp CCAGAAGACACCAGCAATGACCAGGATGGTGATAAGGGAGCCATTTTCCTGAATCTGGCACTACAGACTTaGGCAGGCAAAAAGGCGTCT +
Preference number: 2 (lower is better)
Translates to: PEDTSNDQDGDKGAIFLNLALQT*AGKKAS
Trigger: AGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAG...ATTCAGGAAAATGGCTCCCTTATCACCATCCTGGTCATTGCTGGTGTCTTCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412355.5
3UTR-3UTR GCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTAGCCCTCTGGGGACTTaGAGGGGTAGGTGTAAAGGT +
Preference number: 2 (lower is better)
Translates to: WQGQQSISILLLQFRNLLSPLGT*RGRCKG
Trigger: ACCTTTACACCTACCCCTGCAAGTCCCCAGAGGGCT...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR GCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTCACAGGCCAGTGATGTaGAAGAAGCGGAGAGAGGTG +
Preference number: 2 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFHRPVM*KKRREV
Trigger: CACCTCTCTCCGCTTCTTGCACATCACTGGCCTGTG...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTCAAACACCACACACGTaGGGCCAGGGAACACTCAGA +
Preference number: 2 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFQTPHT*GQGTLR
Trigger: TCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTTG...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTGTTGGCACCTCCCTTaGCCAGGCACAGACACACAA +
Preference number: 2 (lower is better)
Translates to: WQGQQSISILLLQFRNLLCWHLP*PGTDTQ
Trigger: TTGTGTGTCTGTGCCTGGCCAAGGGAGGTGCCAACA...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR CCA 72 bp CCCCAGAGCCTGTCATGGTGCTGTGAGCCCGGCCTGTaGGCGCCTGCCCGGGTTGCAGCGGGGAGAAGGAGC +
Preference number: 3 (lower is better)
Translates to: PQSLSWCCEPGL*APARVAAGRRS
Trigger: GCTCCTTCTCCCCGCTGCAACCCGGGCAGGCGCCCACAGGCCGGGCTCACAGCACCATGACAGGCTCTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR CCA 72 bp AGCTGGCTGTCCTGGCATCCACCCCAGAGCCTGTCATaGTGCTGTGAGCCCGGCCTGTGGGCGCCTGCCCGG +
Preference number: 3 (lower is better)
Translates to: SWLSWHPPQSLS*CCEPGLWAPAR
Trigger: CCGGGCAGGCGCCCACAGGCCGGGCTCACAGCACCATGACAGGCTCTGGGGTGGATGCCAGGACAGCCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR CCA 72 bp ACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATaGCAGGCAGACGGGATGGCAGGGCAGCGGTGGCCT +
Preference number: 3 (lower is better)
Translates to: TWGQGTLRGAVP*QADGMAGQRWP
Trigger: AGGCCACCGCTGCCCTGCCATCCCGTCTGCCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CAA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGAGGGAGCAGACCCCCTaGGGCGAGGCTAGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: RARALLLGRTQPRSPSSPREQTP*GEASSC
Trigger: GCAGCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCCT...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CAA 90 bp GGCCACAGCCTGACCTGCTCATCTATTGAGGGGGCTAGGGAAGGTTGCAGGGGTGGGCGCCTGCCCGGGTaGCAGCGGGGAGAAGGAGCG +
Preference number: 3 (lower is better)
Translates to: GHSLTCSSIEGAREGCRGGRLPG*QRGEGA
Trigger: CGCTCCTTCTCCCCGCTGCAACCCGGGCAGGCGCCC...ACCCCTGCAACCTTCCCTAGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR TCA 72 bp CTCCGAGCCCTCTTCGGGCACGGGCTCAGGGTGCCTTaGTGCCGACTGCCCATCTTCTGCCCACCCTCCAAG +
Preference number: 3 (lower is better)
Translates to: LRALFGHGLRVP*CRLPIFCPPSK
Trigger: CTTGGAGGGTGGGCAGAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCCGTGCCCGAAGAGGGCTCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR GCA 72 bp ACAGCACCAGGCTCTGCAGCTGTCCTTCCCACACGCTaGTCCCGGAGCTGGCTGTCCTGGCATCCACCCCAG +
Preference number: 3 (lower is better)
Translates to: TAPGSAAVLPTR*SRSWLSWHPPQ
Trigger: CTGGGGTGGATGCCAGGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGCCTGGTGCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR CCA 72 bp CAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTaGGACGCACACAGCCAAGGTCACCCTCCAGCCCGG +
Preference number: 3 (lower is better)
Translates to: QGTARCGPELFC*DAHSQGHPPAR
Trigger: CCGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CAA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCACAGGTTCTCCCTGCTaGGCAGCTTCTATCGTGGGC +
Preference number: 3 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGTGSPC*AASIVG
Trigger: GCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTGT...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR GCA 72 bp GGGGCGCTTTCTCCACTCTCATCACTCTCCCGGCGGTaGCATACATGCCGCTCAGGTTCAGCCTGGGCCTGC +
Preference number: 3 (lower is better)
Translates to: GALSPLSSLSRR*HTCRSGSAWAC
Trigger: GCAGGCCCAGGCTGAACCTGAGCGGCATGTATGGCACCGCCGGGAGAGTGATGAGAGTGGAGAAAGCGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR GCA 72 bp TCATCCTCCGAGCCCTCTTCGGGCACGGGCTCAGGGTaGCTTGATGCCGACTGCCCATCTTCTGCCCACCCT +
Preference number: 3 (lower is better)
Translates to: SSSEPSSGTGSG*LDADCPSSAHP
Trigger: AGGGTGGGCAGAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCCGTGCCCGAAGAGGGCTCGGAGGATGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR CCA 72 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTaGGCGAGAACTGCGGGTGAGGTAAGGGCCACAGCC +
Preference number: 3 (lower is better)
Translates to: CKKRREVSRLQH*ARTAGEVRATA
Trigger: GGCTGTGGCCCTTACCTCACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR TCA 72 bp CCCCCTTGGGCGAGGCTAGCAGCTGCTCCATCCCGCTaGACCTGCTCCTTGAGGAAGCCTAGGAAGGCTGTG +
Preference number: 3 (lower is better)
Translates to: PPWARLAAAPSR*TCSLRKPRKAV
Trigger: CACAGCCTTCCTAGGCTTCCTCAAGGAGCAGGTTCAGCGGGATGGAGCAGCTGCTAGCCTCGCCCAAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR TCA 72 bp CTGCAGGTCTCTGGGCAGTGGAGGGCCCCGGCAGGATaGGCCAGCTACCACATTTGCGATAAGGCTCAGGGG +
Preference number: 3 (lower is better)
Translates to: LQVSGQWRAPAG*ASYHICDKAQG
Trigger: CCCCTGAGCCTTATCGCAAATGTGGTAGCTGGCTCATCCTGCCGGGGCCCTCCACTGCCCAGAGACCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR GCA 72 bp CTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTaGTGGGACGCACACAGCCAAGGTCACCCTCCAGCC +
Preference number: 3 (lower is better)
Translates to: LQGTARCGPELF*WDAHSQGHPPA
Trigger: GGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR GCA 72 bp TTCAGGGAGCAGACCCCCTTGGGCGAGGCTAGCAGCTaGTCCATCCCGCTGAACCTGCTCCTTGAGGAAGCC +
Preference number: 3 (lower is better)
Translates to: FREQTPLGEASS*SIPLNLLLEEA
Trigger: GGCTTCCTCAAGGAGCAGGTTCAGCGGGATGGAGCAGCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCCTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR GCA 72 bp GGCAGCGGTGGCCTCCATCCTGGGCCACAGGAACCCTaGTCAGCCTTGTCTATACCTTGTGCACCTGAGGGG +
Preference number: 3 (lower is better)
Translates to: GSGGLHPGPQEP*SALSIPCAPEG
Trigger: CCCCTCAGGTGCACAAGGTATAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CAA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACCTCCCCACTCCACAGTaGGCACAGGTTCTCCCTGCT +
Preference number: 3 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHLPTPQ*AQVLPA
Trigger: AGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGAG...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CAA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTCTCCCCACTCCACAGTaGGCACAGGTTCTCCCTGCT +
Preference number: 3 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSLPTPQ*AQVLPA
Trigger: AGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGAG...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CAA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTGTGTTGGCACCTCCCTaGGCCAGGCACAGACACACA +
Preference number: 3 (lower is better)
Translates to: GTARCGPELFCWDAHSQGVLAPP*ARHRHT
Trigger: TGTGTGTCTGTGCCTGGCCAAGGGAGGTGCCAACAC...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CAA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACACAGGTTCTCCCTGCTaGGCAGCTTCTATCGTGGGC +
Preference number: 3 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDTGSPC*AASIVG
Trigger: GCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTGT...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CAA 90 bp GTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCCACTCCACAGTaGGCACAGGTTCTCCCTGCT +
Preference number: 3 (lower is better)
Translates to: VHGPYPAPLRVRAAQFTTLPTPQ*AQVLPA
Trigger: AGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGAG...AGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CAA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAGGCTGCCAGCCAGGGTaGGTGATGGCAAAGTGCATG +
Preference number: 3 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQGCQPG*VMAKCM
Trigger: CATGCACTTTGCCATCACCAACCCTGGCTGGCAGCC...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR TCA 72 bp GGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTaGGGTAAGGGCCACAGCCTGACCTGCTCATCTATT +
Preference number: 3 (lower is better)
Translates to: GEPAAALGENCG*GKGHSLTCSSI
Trigger: AATAGATGAGCAGGTCAGGCTGTGGCCCTTACCTCACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR CCA 72 bp GTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTaGGGCTGTGGCAAGCCCAGTGTTGGCACCTCCCTT +
Preference number: 3 (lower is better)
Translates to: VCPRFLGPKFLS*GCGKPSVGTSL
Trigger: AAGGGAGGTGCCAACACTGGGCTTGCCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CAA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACAGGTTCTCCCTGCTaGGCAGCTTCTATCGTGGGC +
Preference number: 3 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVTGSPC*AASIVG
Trigger: GCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTGT...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR CCA 72 bp CTCCCCACTCCACAGTTGGCACAGGTTCTCCCTGCTTaGCAGCTTCTATCGTGGGCAGCCCTCTGGGGACTT +
Preference number: 3 (lower is better)
Translates to: LPTPQLAQVLPA*QLLSWAALWGL
Trigger: AAGTCCCCAGAGGGCTGCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CAA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGTGTTGGCACCTCCCTaGGCCAGGCACAGACACACA +
Preference number: 3 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLVLAPP*ARHRHT
Trigger: TGTGTGTCTGTGCCTGGCCAAGGGAGGTGCCAACAC...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR TCA 72 bp TGGGCGAGAACTGCGGGTGAGGTAAGGGCCACAGCCTaGCCTGCTCATCTATTGAGGGGGCTAGGGAAGGTT +
Preference number: 3 (lower is better)
Translates to: WARTAGEVRATA*PAHLLRGLGKV
Trigger: AACCTTCCCTAGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCCCTTACCTCACCCGCAGTTCTCGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR TCA 72 bp TCTTCTGCCCACCCTCCAAGAGGCAGCCGAGAGAAATaGGAGGGAACCCTGGGCACTGTGCCAGGATCTGTG +
Preference number: 3 (lower is better)
Translates to: SSAHPPRGSREK*EGTLGTVPGSV
Trigger: CACAGATCCTGGCACAGTGCCCAGGGTTCCCTCTCATTTCTCTCGGCTGCCTCTTGGAGGGTGGGCAGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR GCA 72 bp AGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTaGAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCAC +
Preference number: 3 (lower is better)
Translates to: RTGASSTHRPVM*KKRREVSRLQH
Trigger: GTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CAA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGTGTTGGCACCTCCCTaGGCCAGGCACAGACACACA +
Preference number: 3 (lower is better)
Translates to: RKAKAERNGSKRTEQEQAVLAPP*ARHRHT
Trigger: TGTGTGTCTGTGCCTGGCCAAGGGAGGTGCCAACAC...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR-3UTR CAA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGTGGCAAGCCCAGTGTaGGCACCTCCCTTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFVASPV*APPLAR
Trigger: CCTGGCCAAGGGAGGTGCCAACACTGGGCTTGCCAC...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR GCA 72 bp AGGAAGCCTAGGAAGGCTGTGCTCTCACGTGGTGGCTaGCAGCCAGGGTTGGTGATGGCAAAGTGCATGAGT +
Preference number: 3 (lower is better)
Translates to: RKPRKAVLSRGG*QPGLVMAKCMS
Trigger: ACTCATGCACTTTGCCATCACCAACCCTGGCTGGCAGCCACCACGTGAGAGCACAGCCTTCCTAGGCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CAA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGGAACCCTGCTCAGCCTaGTCTATACCTTGTGCACCT +
Preference number: 3 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQEPCSA*SIPCAP
Trigger: AGGTGCACAAGGTATAGACAAGGCTGAGCAGGGTTC...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR TCA 72 bp GAGGGCATGCAGGCTCATCTCTGTGGATGCATATTCTaGCAGCACCAGGCTCTGCAGCTGTCCTTCCCACAC +
Preference number: 3 (lower is better)
Translates to: EGMQAHLCGCIF*QHQALQLSFPH
Trigger: GTGTGGGAAGGACAGCTGCAGAGCCTGGTGCTGTCAGAATATGCATCCACAGAGATGAGCCTGCATGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
3UTR-3UTR CAA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGACAGGTTCTCCCTGCTaGGCAGCTTCTATCGTGGGC +
Preference number: 3 (lower is better)
Translates to: QANRTGASSTHRPVMCKKTGSPC*AASIVG
Trigger: GCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTGT...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR CCA 72 bp CCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTaGCAGAGTGACCTTGACGGGTTCAGTAGGGTGAAG +
Preference number: 3 (lower is better)
Translates to: PGTTDLSRQKGV*QSDLDGFSRVK
Trigger: CTTCACCCTACTGAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
3UTR-3UTR CAA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTGTGTTGGCACCTCCCTaGGCCAGGCACAGACACACA +
Preference number: 3 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFVLAPP*ARHRHT
Trigger: TGTGTGTCTGTGCCTGGCCAAGGGAGGTGCCAACAC...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR CCA 72 bp ATAAGGCTCAGGGGCTCAGACTCAGATTGTAAGGACTaGATAGACGTAAAGAGGGCATTTTCAGGGAGCAGA +
Preference number: 3 (lower is better)
Translates to: IRLRGSDSDCKD*IDVKRAFSGSR
Trigger: TCTGCTCCCTGAAAATGCCCTCTTTACGTCTATCCAGTCCTTACAATCTGAGTCTGAGCCCCTGAGCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGGGCGCCTGCCCGGGTTaGAGCGGGGAGAAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTAGACPG*SGEKER
Trigger: GCGCTCCTTCTCCCCGCTGCAACCCGGGCAGGCGCC...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TGCAGCGGGGAGAAGGAGCGCAGGGCAGAGGCGACTTCAGCCCTGTGCCTGGAGCCTGTCATGGTGCTGTaGGCCCGGCCTGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: CSGEKERRAEATSALCLEPVMVL*ARPVGA
Trigger: GGCGCCCACAGGCCGGGCTCACAGCACCATGACAGG...CTCCAGGCACAGGGCTGAAGTCGCCTCTGCCCTGCGCTCCTTCTCCCCGCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGTGCAGCTGCTGTCCGTaGAGCCCCTGGGGGCCGTGG +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTACSCCP*SPWGPW
Trigger: CCACGGCCCCCAGGGGCTGCACGGACAGCAGCTGCA...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS-3UTR CCA 90 bp CTGGAAGCCCCCATGCAGGGCAGTGGTCTCAGGAGCTCCAGGCCGGGGTGCTGCCGCTGCTCCCGGAGCTaGCTGTCCTGGCATCCACCC +
Preference number: 4 (lower is better)
Translates to: LEAPMQGSGLRSSRPGCCRCSRS*LSWHPP
Trigger: GGGTGGATGCCAGGACAGCCAGCTCCGGGAGCAGCG...GCAGCACCCCGGCCTGGAGCTCCTGAGACCACTGCCCTGCATGGGGGCTTCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCGGCGCCTGCCCGGGTTaGAGCGGGGAGAAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: HHTLSQGGPGDEARVPCAGACPG*SGEKER
Trigger: GCGCTCCTTCTCCCCGCTGCAACCCGGGCAGGCGCC...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCGGGAGCAGACCCCCTTaGGCGAGGCTAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGGSRPP*ARLAAA
Trigger: AGCAGCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCC...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGTGTGAGCCCGGCCTGTaGGCGCCTGCCCGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: RARALLLGRTQPRSPSSPCEPGL*APARVA
Trigger: TGCAACCCGGGCAGGCGCCCACAGGCCGGGCTCACA...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCAGCCGGCTGCAGCACTaGGCGAGAACTGCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGSRLQH*ARTAGE
Trigger: CTCACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCT...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGCAGCCGCGGCGACCGTaGACCGGAGTCCACCTCGCC +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWQPRRP*TGVHLA
Trigger: GGCGAGGTGGACTCCGGTCCACGGTCGCCGCGGCTG...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS-3UTR TCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCAGGGCCCCGGCAGGATaGGCCAGCTACCACATTTGC +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGRAPAG*ASYHIC
Trigger: GCAAATGTGGTAGCTGGCTCATCCTGCCGGGGCCCT...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACCCTGTCATGGTGCTGTaGGCCCGGCCTGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHPVMVL*ARPVGA
Trigger: GGCGCCCACAGGCCGGGCTCACAGCACCATGACAGG...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTCCTGTCATGGTGCTGTaGGCCCGGCCTGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGPVMVL*ARPVGA
Trigger: GGCGCCCACAGGCCGGGCTCACAGCACCATGACAGG...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTCCTGTCATGGTGCTGTaGGCCCGGCCTGTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSPVMVL*ARPVGA
Trigger: GGCGCCCACAGGCCGGGCTCACAGCACCATGACAGG...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGCGGTTGAGGCGGGACTaGAGCTCGTGCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTARLRRD*SSCSSS
Trigger: CGAGCTGGAGCACGAGCTGCAGTCCCGCCTCAACCG...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGGCGCCTGCCCGGGTTaGAGCGGGGAGAAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTGACPG*SGEKER
Trigger: GCGCTCCTTCTCCCCGCTGCAACCCGGGCAGGCGCC...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGCCCTGCAGGTCTCTaGGCAGTGGAGGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHSPAGL*AVEGPG
Trigger: GCCGGGGCCCTCCACTGCCCAGAGACCTGCAGGGCT...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TCATCACTCTCCCGGCGGTGCCATACATGCCGCTCAGGTTCAGCCTGGGCCTGCAGCCCTGCAGGTCTCTaGGCAGTGGAGGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: SSLSRRCHTCRSGSAWACSPAGL*AVEGPG
Trigger: GCCGGGGCCCTCCACTGCCCAGAGACCTGCAGGGCT...GCAGGCCCAGGCTGAACCTGAGCGGCATGTATGGCACCGCCGGGAGAGTGATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp CCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACATGTGAGCCCGGCCTGTaGGCGCCTGCCCGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: PPSGHSEMRARALLLGRTCEPGL*APARVA
Trigger: TGCAACCCGGGCAGGCGCCCACAGGCCGGGCTCACA...TGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAAGCCCCTGGGGGCCGTaGATCTTGGCCCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSSPWGP*ILAQPG
Trigger: GCCAGGCTGGGCCAAGATCCACGGCCCCCAGGGGCT...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS-3UTR TCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGCGTGCTCCAGCTCGTTaGAGTGGCGGAGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTARAPAR*SGGGSS
Trigger: GCTGCTACCTCCGCCACTTCAACGAGCTGGAGCACG...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCTGTGCCAGGATCTGTaGTGCCACCGTAGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGLCQDL*CHRSAS
Trigger: AGAGGCGCTACGGTGGCATCACAGATCCTGGCACAG...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCTCTAGCACCACACTCTaGGCCAAGGGGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VQQPKASGEASPFIPLQGSSTTL*AKGVLG
Trigger: CCCCAGGACCCCCTTGGCTCAGAGTGTGGTGCTAGA...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCTCCAGGCCGGGGTGCTaGACAGGGATAGCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGSRPGC*TGIASR
Trigger: TCTGCTAGCTATCCCTGTGCAGCACCCCGGCCTGGA...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCGGAGCAGTCCCAGCATaGAGTGCAGCAGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGGAVPA*SAAAQS
Trigger: GCTTTGGGCTGCTGCACTGCATGCTGGGACTGCTCC...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGCGGGTCTGCGAGCGGTaGGCATTACCCTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RARALLLGRTQPRSPSSPRVCER*ALPCQW
Trigger: CCACTGGCAGGGTAATGCCCACCGCTCGCAGACCCG...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR CCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCTGTGCTCTCACGTGGTaGCTGCCAGCCAGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGCALTW*LPARVG
Trigger: ACCAACCCTGGCTGGCAGCCACCACGTGAGAGCACA...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGAGCCCTGCAGGTCTCTaGGCAGTGGAGGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRSPAGL*AVEGPG
Trigger: GCCGGGGCCCTCCACTGCCCAGAGACCTGCAGGGCT...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ATTCTGACAGCACCAGGCTCTGCAGCTGTCCTTCCCACACGCTGCTCCCGGAGCTGTGAGCCCGGCCTGTaGGCGCCTGCCCGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: ILTAPGSAAVLPTRCSRSCEPGL*APARVA
Trigger: TGCAACCCGGGCAGGCGCCCACAGGCCGGGCTCACA...GCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGCCTGGTGCTGTCAGAAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCCGCTGCTCCCGGAGCTaGCTGTCCTGGCATCCACCC +
Preference number: 4 (lower is better)
Translates to: HHTLSQGGPGDEARVPCARCSRS*LSWHPP
Trigger: GGGTGGATGCCAGGACAGCCAGCTCCGGGAGCAGCG...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCGAGCGAGGGATAGACTaGGGGGCCCGGGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVERGID*GARAPS
Trigger: AGAGGGCGCCCGGGCCCCCCAGTCTATCCCTCGCTC...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGGAGCGAGGGATAGACTaGGGGGCCCGGGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRERGID*GARAPS
Trigger: AGAGGGCGCCCGGGCCCCCCAGTCTATCCCTCGCTC...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACCCCCAGGCCAAGGGCTaGCAGCTCCCAACAGCGGAC +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHPQAKG*QLPTAD
Trigger: GTCCGCTGTTGGGAGCTGCCAGCCCTTGGCCTGGGG...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS-3UTR TCA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTGAACAGCGACCCGGGTaGTTCCAGAGGCTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GTARCGPELFCWDAHSQGEQRPG*FQRLRR
Trigger: CCGGCGGAGCCTCTGGAATCACCCGGGTCGCTGTTC...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
CDS-3UTR TCA 90 bp AGGCTCTGCAGCTGTCCTTCCCACACGCTGCTCCCGGAGCTGGCTGTCCTGGCACGTGCTCCAGCTCGTTaGAGTGGCGGAGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLCSCPSHTLLPELAVLARAPAR*SGGGSS
Trigger: GCTGCTACCTCCGCCACTTCAACGAGCTGGAGCACG...TGCCAGGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR TCA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCGCTGCTCCATCCCGCTaGACCTGCTCCTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VQQPKASGEASPFIPLQGAAPSR*TCSLRK
Trigger: CTTCCTCAAGGAGCAGGTTCAGCGGGATGGAGCAGC...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGAGGGCCCCGGCAGGATaGGCCAGCTACCACATTTGC +
Preference number: 4 (lower is better)
Translates to: RARALLLGRTQPRSPSSPRAPAG*ASYHIC
Trigger: GCAAATGTGGTAGCTGGCTCATCCTGCCGGGGCCCT...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGGGTGCCAAGGTGACTTaGTCCCCTCGGCGACGTGCA +
Preference number: 4 (lower is better)
Translates to: RARALLLGRTQPRSPSSPGAKVT*SPRRRA
Trigger: TGCACGTCGCCGAGGGGAGCAAGTCACCTTGGCACC...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCTGCACGATCCGGGCCTaGACTTCTTGCCACGTGCAA +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGCTIRA*TSCHVQ
Trigger: TTGCACGTGGCAAGAAGTGCAGGCCCGGATCGTGCA...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGATCTGGTGCTCCTTCTaGGTCTGCACGATCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTAIWCSF*VCTIRA
Trigger: GGCCCGGATCGTGCAGACGCAGAAGGAGCACCAGAT...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCATCACGCGGAGCAGCTaGTCAGGGCAGAACACCATG +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGITRSS*SGQNTM
Trigger: CATGGTGTTCTGCCCTGAGCAGCTGCTCCGCGTGAT...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGCAGAGCCTGTCATGGTaGTGTGAGCCCGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: RARALLLGRTQPRSPSSPQSLSW*CEPGLW
Trigger: CCACAGGCCGGGCTCACAGCACCATGACAGGCTCTG...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTGTCCTTCCCACACGCTaGTCCCGGAGCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGVLPTR*SRSWLS
Trigger: GGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGAC...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCTGCCTTGATGCCGACTaGCCATCTTCTGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGCLDAD*PSSAHP
Trigger: AGGGTGGGCAGAAGATGGGCAGTCGGCATCAAGGCA...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGGGCACGGGCTCAGGGTaGCTTGATGCCGACTGCCCA +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWGTGSG*LDADCP
Trigger: TGGGCAGTCGGCATCAAGGCACCCTGAGCCCGTGCC...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTGGCACGGGCTCAGGGTaGCTTGATGCCGACTGCCCA +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSGTGSG*LDADCP
Trigger: TGGGCAGTCGGCATCAAGGCACCCTGAGCCCGTGCC...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCCTCTCCAGCCCTCGATaGTCTGCAGCTGCTGTCCGT +
Preference number: 4 (lower is better)
Translates to: VQQPKASGEASPFIPLQGLSSPR*SAAAVR
Trigger: ACGGACAGCAGCTGCAGAGCATCGAGGGCTGGAGAG...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS-3UTR CCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTCGGTTGCTGAGGCGCTaGGCCAGCTCTAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGRLLRR*ASSSRC
Trigger: GCAACGGCTAGAGCTGGCCCAGCGCCTCAGCAACCG...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGCCCCAGAGCCTGTCATaGTGCTGTGAGCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWPQSLS*CCEPGL
Trigger: CAGGCCGGGCTCACAGCACCATGACAGGCTCTGGGG...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AGGGCAGCGGTGGCCTCCATCCTGGGCCACAGGAACCCTGCTCAGCCTTGTCTACCCCAGAGCCTGTCATaGTGCTGTGAGCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: RAAVASILGHRNPAQPCLPQSLS*CCEPGL
Trigger: CAGGCCGGGCTCACAGCACCATGACAGGCTCTGGGG...TAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCGCTGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTCCCCAGAGCCTGTCATaGTGCTGTGAGCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSPQSLS*CCEPGL
Trigger: CAGGCCGGGCTCACAGCACCATGACAGGCTCTGGGG...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCCGGAGCTGGCTGTCCTaGCATCCACCCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: HHTLSQGGPGDEARVPCARSWLS*HPPQSL
Trigger: CAGGCTCTGGGGTGGATGCCAGGACAGCCAGCTCCG...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTCGGAGCTGGCTGTCCTaGCATCCACCCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSRSWLS*HPPQSL
Trigger: CAGGCTCTGGGGTGGATGCCAGGACAGCCAGCTCCG...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACCGGAGCTGGCTGTCCTaGCATCCACCCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHRSWLS*HPPQSL
Trigger: CAGGCTCTGGGGTGGATGCCAGGACAGCCAGCTCCG...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTATGGCAGGGCAGCGGTaGCCTCCATCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSMAGQR*PPSWAT
Trigger: TGTGGCCCAGGATGGAGGCCACCGCTGCCCTGCCAT...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGTCGTGGGCAGCCCTCTaGGGACTTGCAGGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: RARALLLGRTQPRSPSSPSWAAL*GLAGVG
Trigger: ACCTACCCCTGCAAGTCCCCAGAGGGCTGCCCACGA...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTAGCCGGCTGCAGCACTaGGCGAGAACTGCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGSRLQH*ARTAGE
Trigger: CTCACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCT...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTCCCGGTGGGATTCCCTaGGCTAGTGAGAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGPGGIP*ASESPA
Trigger: GGCAGGGCTCTCACTAGCCCAGGGAATCCCACCGGG...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS-3UTR CCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGTGTCCGTGCAGCCCCTaGGGGCCGTGGATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRCPCSP*GPWILA
Trigger: GGCCAAGATCCACGGCCCCCAGGGGCTGCACGGACA...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS-3UTR TCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACGCCCCCTGTCCACCTTaGCCACCAGCTCCATGGACA +
Preference number: 4 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDAPCPP*PPAPWT
Trigger: TGTCCATGGAGCTGGTGGTCAAGGTGGACAGGGGGC...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTACAGGATGCGGTTGCTaGGGCGCTGGGCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSTGCGC*GAGPAL
Trigger: TAGAGCTGGCCCAGCGCCTCAGCAACCGCATCCTGT...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACCGTGCTCCAGCTCGTTaGAGTGGCGGAGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHRAPAR*SGGGSS
Trigger: GCTGCTACCTCCGCCACTTCAACGAGCTGGAGCACG...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCGCTTGTAGCCACGGTTaGGGCGGGACTGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: HHTLSQGGPGDEARVPCAACSHG*GGTAAR
Trigger: ACGAGCTGCAGTCCCGCCTCAACCGTGGCTACAAGC...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GCTCTGCAGCTGTCCTTCCCACACGCTGCTCCCGGAGCTGGCTGTCCTGGCATCAGCTTGCTGGTACACTaGGGCCTCTGTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: ALQLSFPHAAPGAGCPGISLLVH*GLCLPS
Trigger: GCTGGGCAGACAGAGGCCTCAGTGTACCAGCAAGCT...GATGCCAGGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR TCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCAGGGCCCCGGCAGGATaGGCCAGCTACCACATTTGC +
Preference number: 4 (lower is better)
Translates to: HHTLSQGGPGDEARVPCARAPAG*ASYHIC
Trigger: GCAAATGTGGTAGCTGGCTCATCCTGCCGGGGCCCT...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTGGGCTCAGGGTGCCTTaGTGCCGACTGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSGLRVP*CRLPIF
Trigger: GAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCC...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTGGGCTCAGGGTGCCTTaGTGCCGACTGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGGLRVP*CRLPIF
Trigger: GAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCC...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCTCTAGCACCACACTCTaGGCCAAGGGGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: HHTLSQGGPGDEARVPCASSTTL*AKGVLG
Trigger: CCCCAGGACCCCCTTGGCTCAGAGTGTGGTGCTAGA...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGAGAAGCGGAGAGAGGTaGGCCGGCTGCAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRRSGER*AGCSTG
Trigger: CCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCT...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCCTCGGCGACGTaGACCAACAGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VHGPYPAPLRVRAAQFTTLPSAT*TNRSSS
Trigger: GGAGGAGGACCTGTTGGTGCACGTCGCCGAGGGGAG...AGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTGGTGCCAAGGTGACTTaGTCCCCTCGGCGACGTGCA +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGGAKVT*SPRRRA
Trigger: TGCACGTCGCCGAGGGGAGCAAGTCACCTTGGCACC...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGTGCCAAGGTGACTTaGTCCCCTCGGCGACGTGCA +
Preference number: 4 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSGAKVT*SPRRRA
Trigger: TGCACGTCGCCGAGGGGAGCAAGTCACCTTGGCACC...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GCTCTGCAGCTGTCCTTCCCACACGCTGCTCCCGGAGCTGGCTGTCCTGGCATCCGGGACTGCAGCTCGTaGTCCAGCTCGTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: ALQLSFPHAAPGAGCPGIRDCSS*SSSLKW
Trigger: CCACTTCAACGAGCTGGAGCACGAGCTGCAGTCCCG...GATGCCAGGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGCGGTTGAGGCGGGACTaGAGCTCGTGCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRRLRRD*SSCSSS
Trigger: CGAGCTGGAGCACGAGCTGCAGTCCCGCCTCAACCG...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp ATGTGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGCGGTTGAGGCGGGACTaGAGCTCGTGCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: MCKKRREVSRLQHWARTARLRRD*SSCSSS
Trigger: CGAGCTGGAGCACGAGCTGCAGTCCCGCCTCAACCG...CGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACAAACTCGTCCCGGGTCTaGGAGCGGTGGGCATTACCC +
Preference number: 4 (lower is better)
Translates to: PPSGHSEMRARALLLGRTNSSRV*ERWALP
Trigger: GGGTAATGCCCACCGCTCGCAGACCCGGGACGAGTT...TGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR GCA 90 bp ACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCGGCGAGGCTAGCAGCTaGTCCATCCCGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: TVPTLLRSEFGQRNSPLSGEASS*SIPLNL
Trigger: CAGGTTCAGCGGGATGGAGCAGCTGCTAGCCTCGCC...GGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCCAGAGCCTGTCATGGTaGTGTGAGCCCGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: HHTLSQGGPGDEARVPCAQSLSW*CEPGLW
Trigger: CCACAGGCCGGGCTCACAGCACCATGACAGGCTCTG...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGGTCCTTCCCACACGCTaGTCCCGGAGCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRVLPTR*SRSWLS
Trigger: GGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGAC...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTCGGCGGTGCCATACATaGCGCTCAGGTTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSRRCHT*RSGSAW
Trigger: CCAGGCTGAACCTGAGCGGCATGTATGGCACCGCCG...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGGCACGGGCTCAGGGTaGCTTGATGCCGACTGCCCA +
Preference number: 4 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTGTGSG*LDADCP
Trigger: TGGGCAGTCGGCATCAAGGCACCCTGAGCCCGTGCC...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGGGAGCAGTCCCAGCATaGAGTGCAGCAGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: RARALLLGRTQPRSPSSPGAVPA*SAAAQS
Trigger: GCTTTGGGCTGCTGCACTGCATGCTGGGACTGCTCC...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAACACGGTCCCTACCCTaGTCCGCTCCGAGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTTRSLP*SAPSSG
Trigger: GCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGT...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ATGTGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGCGGTTGCTGAGGCGCTaGGCCAGCTCTAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: MCKKRREVSRLQHWARTARLLRR*ASSSRC
Trigger: GCAACGGCTAGAGCTGGCCCAGCGCCTCAGCAACCG...CGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGCGGTTGCTGAGGCGCTaGGCCAGCTCTAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQRLLRR*ASSSRC
Trigger: GCAACGGCTAGAGCTGGCCCAGCGCCTCAGCAACCG...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCCGGGTCTGCGAGCGGTaGGCATTACCCTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVRVCER*ALPCQW
Trigger: CCACTGGCAGGGTAATGCCCACCGCTCGCAGACCCG...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR CCA 90 bp AGGCTCTGCAGCTGTCCTTCCCACACGCTGCTCCCGGAGCTGGCTGTCCTGGCAAATCTCCAGGGCCCGTaGGCGCAGGCAGAAGATGAG +
Preference number: 4 (lower is better)
Translates to: RLCSCPSHTLLPELAVLANLQGP*AQAEDE
Trigger: CTCATCTTCTGCCTGCGCCCACGGGCCCTGGAGATT...TGCCAGGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp AGGGCAGCGGTGGCCTCCATCCTGGGCCACAGGAACCCTGCTCAGCCTTGTCTAGGCTGTGCTCTCACGTaGTGGCTGCCAGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: RAAVASILGHRNPAQPCLGCALT*WLPARV
Trigger: AACCCTGGCTGGCAGCCACCACGTGAGAGCACAGCC...TAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCGCTGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAGGGAGCAGACCCCCTTaGGCGAGGCTAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQGSRPP*ARLAAA
Trigger: AGCAGCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCC...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCGGAGCTGGCTGTCCTaGCATCCACCCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GTARCGPELFCWDAHSQGRSWLS*HPPQSL
Trigger: CAGGCTCTGGGGTGGATGCCAGGACAGCCAGCTCCG...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ATCACTCTCCCGGCGGTGCCATACATGCCGCTCAGGTTCAGCCTGGGCCTGCTGCGCTCAGGTTCAGCCTaGGCCTGCTGCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: ITLPAVPYMPLRFSLGLLRSGSA*ACCLWS
Trigger: GCTCCACAAGCAGCAGGCCCAGGCTGAACCTGAGCG...CAGCAGGCCCAGGCTGAACCTGAGCGGCATGTATGGCACCGCCGGGAGAGTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCGCTCAGGTTCAGCCTaGGCCTGCTGCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDRSGSA*ACCLWS
Trigger: GCTCCACAAGCAGCAGGCCCAGGCTGAACCTGAGCG...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGGAGCGAGGGATAGACTaGGGGGCCCGGGCGCCCTCT +
Preference number: 4 (lower is better)
Translates to: TEREQANRTGASSTHRPVERGID*GARAPS
Trigger: AGAGGGCGCCCGGGCCCCCCAGTCTATCCCTCGCTC...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCGGTGGCCTCCATCCTaGGCCACAGGAACCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GTARCGPELFCWDAHSQGRWPPS*ATGTLL
Trigger: GAGCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCG...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCATGGCAGGGCAGCGGTaGCCTCCATCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVMAGQR*PPSWAT
Trigger: TGTGGCCCAGGATGGAGGCCACCGCTGCCCTGCCAT...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGAGAGGAGCCGTCCCATaGCAGGCAGACGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWRGAVP*QADGMA
Trigger: TGCCATCCCGTCTGCCTGCCATGGGACGGCTCCTCT...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTCCTCTCCTGGGGCTGTaGCAAGCCCAGTGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSPLLGL*QAQCWH
Trigger: GTGCCAACACTGGGCTTGCCACAGCCCCAGGAGAGG...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACCTCTCCTGGGGCTGTaGCAAGCCCAGTGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: PPSGHSEMRARALLLGRTPLLGL*QAQCWH
Trigger: GTGCCAACACTGGGCTTGCCACAGCCCCAGGAGAGG...TGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGTCGTGGGCAGCCCTCTaGGGACTTGCAGGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWSWAAL*GLAGVG
Trigger: ACCTACCCCTGCAAGTCCCCAGAGGGCTGCCCACGA...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCATCGTGGGCAGCCCTCTaGGGACTTGCAGGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSSWAAL*GLAGVG
Trigger: ACCTACCCCTGCAAGTCCCCAGAGGGCTGCCCACGA...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR CAA 72 bp CCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTaGCTGGGACGCACACAGCCAAGGTCACCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSGHSEMRARAL*LGRTQPRSPSS
Trigger: GCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGGAACAGCGACCCGGGTaGTTCCAGAGGCTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: TEREQANRTGASSTHRPVEQRPG*FQRLRR
Trigger: CCGGCGGAGCCTCTGGAATCACCCGGGTCGCTGTTC...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
CDS-3UTR TCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCGCCCCCTGTCCACCTTaGCCACCAGCTCCATGGACA +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVAPCPP*PPAPWT
Trigger: TGTCCATGGAGCTGGTGGTCAAGGTGGACAGGGGGC...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCACTCCTCCCCTGGGGGTaGATCACTATAGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSLLPWG*ITIGGL
Trigger: GAGGCCTCCTATAGTGATTCACCCCCAGGGGAGGAG...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAACAGGATGCGGTTGCTaGGGCGCTGGGCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQTGCGC*GAGPAL
Trigger: TAGAGCTGGCCCAGCGCCTCAGCAACCGCATCCTGT...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGGCTTGTAGCCACGGTTaGGGCGGGACTGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQACSHG*GGTAAR
Trigger: ACGAGCTGCAGTCCCGCCTCAACCGTGGCTACAAGC...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAGCTTGTAGCCACGGTTaGGGCGGGACTGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQACSHG*GGTAAR
Trigger: ACGAGCTGCAGTCCCGCCTCAACCGTGGCTACAAGC...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCAGCTTGCTGGTACACTaGGGCCTCTGTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HHTLSQGGPGDEARVPCASLLVH*GLCLPS
Trigger: GCTGGGCAGACAGAGGCCTCAGTGTACCAGCAAGCT...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGCTGCTCCATCCCGCTaGACCTGCTCCTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSAAPSR*TCSLRK
Trigger: CTTCCTCAAGGAGCAGGTTCAGCGGGATGGAGCAGC...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACGGCAGCCGAGAGAAATaGGAGGGAACCCTGGGCACT +
Preference number: 4 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDGSREK*EGTLGT
Trigger: AGTGCCCAGGGTTCCCTCTCATTTCTCTCGGCTGCC...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTGGCAGCCGAGAGAAATaGGAGGGAACCCTGGGCACT +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGGSREK*EGTLGT
Trigger: AGTGCCCAGGGTTCCCTCTCATTTCTCTCGGCTGCC...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCTCTAGCACCACACTCTaGGCCAAGGGGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVSSTTL*AKGVLG
Trigger: CCCCAGGACCCCCTTGGCTCAGAGTGTGGTGCTAGA...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGGCACACACAGGCCAGTaGTGTGCAAGAAGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: RARALLLGRTQPRSPSSPAHTGQ*CARSGE
Trigger: CTCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGC...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GCTCTGCAGCTGTCCTTCCCACACGCTGCTCCCGGAGCTGGCTGTCCTGGCATCCTCTCCAGCCCTCGATaGTCTGCAGCTGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: ALQLSFPHAAPGAGCPGILSSPR*SAAAQE
Trigger: TTCCTGAGCAGCTGCAGAGCATCGAGGGCTGGAGAG...GATGCCAGGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTTGCTCCTTCTGCGTCTaGACGATCCGGGCCTGCACT +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGCSFCV*TIRACT
Trigger: AGTGCAGGCCCGGATCGTGCAGACGCAGAAGGAGCA...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCATGCTCCTTCTGCGTCTaGACGATCCGGGCCTGCACT +
Preference number: 4 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSCSFCV*TIRACT
Trigger: AGTGCAGGCCCGGATCGTGCAGACGCAGAAGGAGCA...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGTGCTCCTTCTGCGTCTaGACGATCCGGGCCTGCACT +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWCSFCV*TIRACT
Trigger: AGTGCAGGCCCGGATCGTGCAGACGCAGAAGGAGCA...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCATCTGGTGCTCCTTCTaGGTCTGCACGATCCGGGCC +
Preference number: 4 (lower is better)
Translates to: HHTLSQGGPGDEARVPCAIWCSF*VCTIRA
Trigger: GGCCCGGATCGTGCAGACGCAGAAGGAGCACCAGAT...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACGCCAGCTCTAGCCGTTaGCCCCCACGTTTGTACTCG +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHASSSR*PPRLYS
Trigger: CGAGTACAAACGTGGGGGGCAACGGCTAGAGCTGGC...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACGCCAGCTCTAGCCGTTaGCCCCCACGTTTGTACTCG +
Preference number: 4 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDASSSR*PPRLYS
Trigger: CGAGTACAAACGTGGGGGGCAACGGCTAGAGCTGGC...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGGCCAGCTCTAGCCGTTaGCCCCCACGTTTGTACTCG +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWASSSR*PPRLYS
Trigger: CGAGTACAAACGTGGGGGGCAACGGCTAGAGCTGGC...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCACGGGACTGCAGCTCGTaGTCCAGCTCGTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSRDCSS*SSSLKW
Trigger: CCACTTCAACGAGCTGGAGCACGAGCTGCAGTCCCG...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGGGGCAGAACACCATGTaGTGGTCCGGGATAAAGGAC +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTAGQNTM*WSGIKD
Trigger: GTCCTTTATCCCGGACCAGCACATGGTGTTCTGCCC...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACTCTCACGTGGTGGCTaGCAGCCAGGGTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: PPSGHSEMRARALLLGRTLSRGG*QPGLVM
Trigger: CATCACCAACCCTGGCTGGCAGCCACCACGTGAGAG...TGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGGCGAGGCTAGCAGCTaGTCCATCCCGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTGEASS*SIPLNL
Trigger: CAGGTTCAGCGGGATGGAGCAGCTGCTAGCCTCGCC...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGGCGCCTGCCCGGGTTaGAGCGGGGAGAAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: RKAKAERNGSKRTEQEQAGACPG*SGEKER
Trigger: GCGCTCCTTCTCCCCGCTGCAACCCGGGCAGGCGCC...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTCACTCTCCCGGCGGTaGCATACATGCCGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSSLSRR*HTCRSG
Trigger: ACCTGAGCGGCATGTATGGCACCGCCGGGAGAGTGA...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACTCCAGGCCGGGGTGCTaGACAGGGATAGCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHSRPGC*TGIASR
Trigger: TCTGCTAGCTATCCCTGTGCAGCACCCCGGCCTGGA...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCGGGCCACAGGAACCCTaGTCAGCCTTGTCTATACCT +
Preference number: 4 (lower is better)
Translates to: VQQPKASGEASPFIPLQGGPQEP*SALSIP
Trigger: AGGTATAGACAAGGCTGAGCAGGGTTCCTGTGGCCC...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACGGAGCAGTCCCAGCATaGAGTGCAGCAGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHGAVPA*SAAAQS
Trigger: GCTTTGGGCTGCTGCACTGCATGCTGGGACTGCTCC...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCGAGGCCTCTAGGCGCTaGTATTCAGTGTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGEASRR*YSVSNC
Trigger: GCAGTTTGACACTGAATACCAGCGCCTAGAGGCCTC...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTAATCTCCAGGGCCCGTaGGCGCAGGCAGAAGATGAG +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSNLQGP*AQAEDE
Trigger: CTCATCTTCTGCCTGCGCCCACGGGCCCTGGAGATT...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGCCATCCTCAGCTTGCTaGTACACTGAGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTAPSSAC*YTEASV
Trigger: GACAGAGGCCTCAGTGTACCAGCAAGCTGAGGATGG...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCATGTGCTCTCACGTGGTaGCTGCCAGCCAGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSCALTW*LPARVG
Trigger: ACCAACCCTGGCTGGCAGCCACCACGTGAGAGCACA...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ATGTGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGCTGTGCTCTCACGTaGTGGCTGCCAGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: MCKKRREVSRLQHWARTAGCALT*WLPARV
Trigger: AACCCTGGCTGGCAGCCACCACGTGAGAGCACAGCC...CGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACACGCTCAGGTTCAGCCTaGGCCTGCTGCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTRSGSA*ACCLWS
Trigger: GCTCCACAAGCAGCAGGCCCAGGCTGAACCTGAGCG...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGAGGAGCCGTCCCATaGCAGGCAGACGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQRGAVP*QADGMA
Trigger: TGCCATCCCGTCTGCCTGCCATGGGACGGCTCCTCT...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGCAAACACCACACACGTaGGGCCAGGGAACACTCAGA +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTAQTPHT*GQGTLR
Trigger: TCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTTG...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGTGGCAGTACTGGGGCTaGGCTGGGGGCCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWWQYWG*AGGQFL
Trigger: TAGAAACTGGCCCCCAGCCCAGCCCCAGTACTGCCA...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAACAGCGACCCGGGTaGTTCCAGAGGCTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTEREQRPG*FQRLRR
Trigger: CCGGCGGAGCCTCTGGAATCACCCGGGTCGCTGTTC...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
CDS-3UTR TCA 90 bp GGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGGAACAGCGACCCGGGTaGTTCCAGAGGCTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: GTTDLSRQKGVWQSDLDGEQRPG*FQRLRR
Trigger: CCGGCGGAGCCTCTGGAATCACCCGGGTCGCTGTTC...CCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR TCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGCTCCTCCCCTGGGGGTaGATCACTATAGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRLLPWG*ITIGGL
Trigger: GAGGCCTCCTATAGTGATTCACCCCCAGGGGAGGAG...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGCTGGCACTACAGACTTaGGCAGGCAAAAAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTALALQT*AGKKAS
Trigger: AGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAG...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp ACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCGATAGCCACTGGGGATaGCCATGCTGGCGAACATCC +
Preference number: 4 (lower is better)
Translates to: TVPTLLRSEFGQRNSPLSDSHWG*PCWRTS
Trigger: GGATGTTCGCCAGCATGGTCATCCCCAGTGGCTATC...GGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTAGCTTGCTGGTACACTaGGGCCTCTGTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VHGPYPAPLRVRAAQFTTSLLVH*GLCLPS
Trigger: GCTGGGCAGACAGAGGCCTCAGTGTACCAGCAAGCT...AGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp ATGTGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGAGCTTGCTGGTACACTaGGGCCTCTGTCTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: MCKKRREVSRLQHWARTASLLVH*GLCLPS
Trigger: GCTGGGCAGACAGAGGCCTCAGTGTACCAGCAAGCT...CGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAGCTGCTCCATCCCGCTaGACCTGCTCCTTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQAAPSR*TCSLRK
Trigger: CTTCCTCAAGGAGCAGGTTCAGCGGGATGGAGCAGC...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGCTGTGCCAGGATCTGTaGTGCCACCGTAGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQLCQDL*CHRSAS
Trigger: AGAGGCGCTACGGTGGCATCACAGATCCTGGCACAG...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGCTGTGCCAGGATCTGTaGTGCCACCGTAGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRLCQDL*CHRSAS
Trigger: AGAGGCGCTACGGTGGCATCACAGATCCTGGCACAG...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGAGAAGCGGAGAGAGGTaGGCCGGCTGCAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQRSGER*AGCSTG
Trigger: CCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCT...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGAGAAGCGGAGAGAGGTaGGCCGGCTGCAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: TEREQANRTGASSTHRPVRSGER*AGCSTG
Trigger: CCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCT...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGCAGCCCTCGATGCTCTaGAGCTGCTCAGGAACAGCG +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQQPSML*SCSGTA
Trigger: CGCTGTTCCTGAGCAGCTGCAGAGCATCGAGGGCTG...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361242.9
ENST00000409033.7
CDS-3UTR GCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCCAGCCCTCGATGCTCTaGAGCTGCTCAGGAACAGCG +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVQPSML*SCSGTA
Trigger: CGCTGTTCCTGAGCAGCTGCAGAGCATCGAGGGCTG...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361242.9
ENST00000409033.7
CDS-3UTR GCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGTATTCAGTGTCAAACTaGGCCATCACCACCGCCCCC +
Preference number: 4 (lower is better)
Translates to: RARALLLGRTQPRSPSSPYSVSN*AITTAP
Trigger: GGGGGCGGTGGTGATGGCGCAGTTTGACACTGAATA...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GTGCTCTCACGTGGTGGCTGCCAGCCAGGGTTGGTGATGGCAAAGTGCATGAGTCTCCCCTCGGCGACGTaGACCAACAGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VLSRGGCQPGLVMAKCMSLPSAT*TNRSSS
Trigger: GGAGGAGGACCTGTTGGTGCACGTCGCCGAGGGGAG...ACTCATGCACTTTGCCATCACCAACCCTGGCTGGCAGCCACCACGTGAGAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGGCACTTCTTGCCACGTaGAATACGGAAGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTAALLAT*NTEGQT
Trigger: TGTCTGCCCTTCCGTATTGCACGTGGCAAGAAGTGC...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCGGGCCTGCACTTCTTaGCACGTGCAATACGGAAGG +
Preference number: 4 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDRACTS*HVQYGR
Trigger: CCTTCCGTATTGCACGTGGCAAGAAGTGCAGGCCCG...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTCGGGCCTGCACTTCTTaGCACGTGCAATACGGAAGG +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGRACTS*HVQYGR
Trigger: CCTTCCGTATTGCACGTGGCAAGAAGTGCAGGCCCG...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTTGCTCCTTCTGCGTCTaGACGATCCGGGCCTGCACT +
Preference number: 4 (lower is better)
Translates to: VHGPYPAPLRVRAAQFTTCSFCV*TIRACT
Trigger: AGTGCAGGCCCGGATCGTGCAGACGCAGAAGGAGCA...AGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGATCACGCGGAGCAGCTaGTCAGGGCAGAACACCATG +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWITRSS*SGQNTM
Trigger: CATGGTGTTCTGCCCTGAGCAGCTGCTCCGCGTGAT...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGCTCTCACGTGGTGGCTaGCAGCCAGGGTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQLSRGG*QPGLVM
Trigger: CATCACCAACCCTGGCTGGCAGCCACCACGTGAGAG...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GGCCTCCATCCTGGGCCACAGGAACCCTGCTCAGCCTTGTCTATACCTTGTGCAGTCCTTCCCACACGCTaGTCCCGGAGCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GLHPGPQEPCSALSIPCAVLPTR*SRSWLS
Trigger: GGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGAC...TGCACAAGGTATAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGTCAGCCTGGGCCTGCTaGTTGTGGAGCTGGTGCATA +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWSAWAC*LWSWCI
Trigger: TATGCACCAGCTCCACAAGCAGCAGGCCCAGGCTGA...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp ATGTGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGTCCAGGCCGGGGTGCTaGACAGGGATAGCTAGCAGA +
Preference number: 4 (lower is better)
Translates to: MCKKRREVSRLQHWARTASRPGC*TGIASR
Trigger: TCTGCTAGCTATCCCTGTGCAGCACCCCGGCCTGGA...CGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp AGGGCAGCGGTGGCCTCCATCCTGGGCCACAGGAACCCTGCTCAGCCTTGTCTATGCCTTGATGCCGACTaGCCATCTTCTGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: RAAVASILGHRNPAQPCLCLDAD*PSSAHP
Trigger: AGGGTGGGCAGAAGATGGGCAGTCGGCATCAAGGCA...TAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCGCTGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp CCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACAGGCCACAGCCTGACCTaGTCATCTATTGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PPSGHSEMRARALLLGRTGHSLT*SSIEGA
Trigger: AGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC...TGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CTTCGGGCACGGGCTCAGGGTGCCTTGATGCCGACTGCCCATCTTCTGCCCACCCACAGGCCAGTGATGTaGAAGAAGCGGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LRARAQGALMPTAHLLPTHRPVM*KKRREV
Trigger: CACCTCTCTCCGCTTCTTGCACATCACTGGCCTGTG...GGTGGGCAGAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCCGTGCCCGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACGGGCCAGAGCTCTTTTaGTGGGACGCACACAGCCAA +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHGPELF*WDAHSQ
Trigger: TTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCC...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACGGGCCAGAGCTCTTTTaGTGGGACGCACACAGCCAA +
Preference number: 4 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDGPELF*WDAHSQ
Trigger: TTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCC...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACACAGGGCACAGCGAGATaGGGGCCAGAGCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTQGTAR*GPELFC
Trigger: GCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTG...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCAACACTGCCTTGTACTaGAAGAGCTGGGCAAACTCG +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGNTALY*KSWANS
Trigger: CGAGTTTGCCCAGCTCTTCCAGTACAAGGCAGTGTT...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR CCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCTGTGCTCTCACGTGGTaGCTGCCAGCCAGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVCALTW*LPARVG
Trigger: ACCAACCCTGGCTGGCAGCCACCACGTGAGAGCACA...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGAGCAGACCCCCTTaGGCGAGGCTAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLGSRPP*ARLAAA
Trigger: AGCAGCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCC...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGGGGAGCAGACCCCCTTaGGCGAGGCTAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQGSRPP*ARLAAA
Trigger: AGCAGCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCC...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGCCCCAGAGCCTGTCATaGTGCTGTGAGCCCGGCCTG +
Preference number: 4 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQPQSLS*CCEPGL
Trigger: CAGGCCGGGCTCACAGCACCATGACAGGCTCTGGGG...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGGCAGGGCAGCGGTaGCCTCCATCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: TEREQANRTGASSTHRPVMAGQR*PPSWAT
Trigger: TGTGGCCCAGGATGGAGGCCACCGCTGCCCTGCCAT...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGTGGCAGTACTGGGGCTaGGCTGGGGGCCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQWQYWG*AGGQFL
Trigger: TAGAAACTGGCCCCCAGCCCAGCCCCAGTACTGCCA...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACTGGCAGCTTCTATCGTaGGCAGCCCTCTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDWQLLS*AALWGL
Trigger: AAGTCCCCAGAGGGCTGCCCACGATAGAAGCTGCCA...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CTTCGGGCACGGGCTCAGGGTGCCTTGATGCCGACTGCCCATCTTCTGCCCACCCAGGTTCTCCCTGCTTaGCAGCTTCTATCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LRARAQGALMPTAHLLPTQVLPA*QLLSWA
Trigger: TGCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTG...GGTGGGCAGAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCCGTGCCCGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp GGCCTCCATCCTGGGCCACAGGAACCCTGCTCAGCCTTGTCTATACCTTGTGCAAGCCGGCTGCAGCACTaGGCGAGAACTGCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GLHPGPQEPCSALSIPCASRLQH*ARTAGE
Trigger: CTCACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCT...TGCACAAGGTATAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGAGCGTTGAGGGGAGCTaGACGCTAGGGTCTTCACCC +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRSVEGS*TLGSSP
Trigger: GGGTGAAGACCCTAGCGTCCAGCTCCCCTCAACGCT...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CTGGAAGCCCCCATGCAGGGCAGTGGTCTCAGGAGCTCCAGGCCGGGGTGCTGCAAGACCTCAGTCTCCTaGGGGCCCATCCTAAAAGAT +
Preference number: 4 (lower is better)
Translates to: LEAPMQGSGLRSSRPGCCKTSVS*GPILKD
Trigger: ATCTTTTAGGATGGGCCCCCAGGAGACTGAGGTCTT...GCAGCACCCCGGCCTGGAGCTCCTGAGACCACTGCCCTGCATGGGGGCTTCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR TCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGGGAGCCATTTTCCTaGATCCTGGCACTACAGACT +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTAREPFS*ILALQT
Trigger: AGTCTGTAGTGCCAGGATTCAGGAAAATGGCTCCCT...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGCGTGCTCCAGCTCGTTaGAGTGGCGGAGGTAGCAGC +
Preference number: 4 (lower is better)
Translates to: TEREQANRTGASSTHRPVRAPAR*SGGGSS
Trigger: GCTGCTACCTCCGCCACTTCAACGAGCTGGAGCACG...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGTGGCGAACATCCATCTaGGCAAAGGAGCAGGTATCT +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTAWRTSI*AKEQVS
Trigger: AGATACCTGCTCCTTTGCTCAGATGGATGTTCGCCA...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCTGGCGAACATCCATCTaGGCAAAGGAGCAGGTATCT +
Preference number: 4 (lower is better)
Translates to: VQQPKASGEASPFIPLQGWRTSI*AKEQVS
Trigger: AGATACCTGCTCCTTTGCTCAGATGGATGTTCGCCA...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp ACCCCCTTGGGCGAGGCTAGCAGCTGCTCCATCCCGCTGAACCTGCTCCTTGAGGTAAGGGCCACAGCCTaGCCTGCTCATCTATTGAGG +
Preference number: 4 (lower is better)
Translates to: TPLGEASSCSIPLNLLLEVRATA*PAHLLR
Trigger: CCTCAATAGATGAGCAGGTCAGGCTGTGGCCCTTAC...CTCAAGGAGCAGGTTCAGCGGGATGGAGCAGCTGCTAGCCTCGCCCAAGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR TCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACGTAAGGGCCACAGCCTaGCCTGCTCATCTATTGAGG +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHVRATA*PAHLLR
Trigger: CCTCAATAGATGAGCAGGTCAGGCTGTGGCCCTTAC...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGGCACACACAGGCCAGTaGTGTGCAAGAAGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRAHTGQ*CARSGE
Trigger: CTCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGC...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp ATTCTGACAGCACCAGGCTCTGCAGCTGTCCTTCCCACACGCTGCTCCCGGAGCGCACACACAGGCCAGTaGTGTGCAAGAAGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: ILTAPGSAAVLPTRCSRSAHTGQ*CARSGE
Trigger: CTCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGC...GCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGCCTGGTGCTGTCAGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR TCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGCCCCCTGTCCACCTTaGCCACCTCAGGAACAGCGA +
Preference number: 4 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLAPCPP*PPQEQR
Trigger: TCGCTGTTCCTGAGGTGGTCAAGGTGGACAGGGGGC...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396761.6
CDS-3UTR GCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGCTCTCCAGCCCTCGATaGTCTGCAGCTGCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRLSSPR*SAAAQE
Trigger: TTCCTGAGCAGCTGCAGAGCATCGAGGGCTGGAGAG...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361242.9
ENST00000409033.7
CDS-3UTR GCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACTATTCAGTGTCAAACTaGGCCATCACCACCGCCCCC +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHYSVSN*AITTAP
Trigger: GGGGGCGGTGGTGATGGCGCAGTTTGACACTGAATA...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTTGCACGATCCGGGCCTaGACTTCTTGCCACGTGCAA +
Preference number: 4 (lower is better)
Translates to: GTARCGPELFCWDAHSQGCTIRA*TSCHVQ
Trigger: TTGCACGTGGCAAGAAGTGCAGGCCCGGATCGTGCA...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACTGGATGCAGATCTGGTaGTCCTTCTGCGTCTGCACG +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHWMQIW*SFCVCT
Trigger: CGTGCAGACGCAGAAGGAGCACCAGATCTGCATCCA...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGAACTCGTCCCGGGTCTaGGAGCGGTGGGCATTACCC +
Preference number: 4 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLNSSRV*ERWALP
Trigger: GGGTAATGCCCACCGCTCGCAGACCCGGGACGAGTT...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR GCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGACTGAGGCCTCTGTCTaGCCAGCAGATAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRTEASV*PADSHW
Trigger: CCAGTGGCTATCTGCTGGGCAGACAGAGGCCTCAGT...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp ATGTGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGACTGAGGCCTCTGTCTaGCCAGCAGATAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: MCKKRREVSRLQHWARTATEASV*PADSHW
Trigger: CCAGTGGCTATCTGCTGGGCAGACAGAGGCCTCAGT...CGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GGCCACAGCCTGACCTGCTCATCTATTGAGGGGGCTAGGGAAGGTTGCAGGGGTAGCCTAGGAAGGCTGTaGTCTCACGTGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GHSLTCSSIEGAREGCRGSLGRL*SHVVAA
Trigger: GGCAGCCACCACGTGAGAGCACAGCCTTCCTAGGCT...ACCCCTGCAACCTTCCCTAGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGGCCAGCTACCACATTTaGGATAAGGCTCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWASYHI*DKAQGL
Trigger: GAGCCCCTGAGCCTTATCGCAAATGTGGTAGCTGGC...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGTCAGCCTGGGCCTGCTaGTTGTGGAGCTGGTGCATA +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQSAWAC*LWSWCI
Trigger: TATGCACCAGCTCCACAAGCAGCAGGCCCAGGCTGA...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GTGCTCTCACGTGGTGGCTGCCAGCCAGGGTTGGTGATGGCAAAGTGCATGAGTCGGCGGTGCCATACATaGCGCTCAGGTTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: VLSRGGCQPGLVMAKCMSRRCHT*RSGSAW
Trigger: CCAGGCTGAACCTGAGCGGCATGTATGGCACCGCCG...ACTCATGCACTTTGCCATCACCAACCCTGGCTGGCAGCCACCACGTGAGAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp GGCCACAGCCTGACCTGCTCATCTATTGAGGGGGCTAGGGAAGGTTGCAGGGGTCTCTGGAAGCCCCCATaGAGGGCAGTGGTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GHSLTCSSIEGAREGCRGLWKPP*RAVVSG
Trigger: TCCTGAGACCACTGCCCTGCATGGGGGCTTCCAGAG...ACCCCTGCAACCTTCCCTAGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp ATGTGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGTGCCTTGATGCCGACTaGCCATCTTCTGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: MCKKRREVSRLQHWARTACLDAD*PSSAHP
Trigger: AGGGTGGGCAGAAGATGGGCAGTCGGCATCAAGGCA...CGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTGGGCCACAGGAACCCTaGTCAGCCTTGTCTATACCT +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGGPQEP*SALSIP
Trigger: AGGTATAGACAAGGCTGAGCAGGGTTCCTGTGGCCC...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTAGCCCTCTGGGGACTTaGAGGGGTAGGTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSSPLGT*RGRCKG
Trigger: ACCTTTACACCTACCCCTGCAAGTCCCCAGAGGGCT...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp ACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCGGCACAGGTTCTCCCTaGTTGGCAGCTTCTATCGTG +
Preference number: 4 (lower is better)
Translates to: TVPTLLRSEFGQRNSPLSGTGSP*LAASIV
Trigger: CACGATAGAAGCTGCCAAGCAGGGAGAACCTGTGCC...GGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCGGCACAGGTTCTCCCTaGTTGGCAGCTTCTATCGTG +
Preference number: 4 (lower is better)
Translates to: HHTLSQGGPGDEARVPCAGTGSP*LAASIV
Trigger: CACGATAGAAGCTGCCAAGCAGGGAGAACCTGTGCC...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp ATGTGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGGCCAGAGCTCTTTTaGTGGGACGCACACAGCCAA +
Preference number: 4 (lower is better)
Translates to: MCKKRREVSRLQHWARTAGPELF*WDAHSQ
Trigger: TTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCC...CGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCAGGCAAAAAGGCGTCTaGCAGAGTGACCTTGACGGG +
Preference number: 4 (lower is better)
Translates to: TVPTLLRSEFGQRNSPLSRQKGV*QSDLDG
Trigger: CCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCT...GGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGCGGGTCTGCGAGCGGTaGGCATTACCCTGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERRVCER*ALPCQW
Trigger: CCACTGGCAGGGTAATGCCCACCGCTCGCAGACCCG...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR CCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTGTACTGGAAGAGCTaGGCAAACTCGTCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSLYWKS*ANSSRV
Trigger: GACCCGGGACGAGTTTGCCCAGCTCTTCCAGTACAA...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR CCA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCAACACTGCCTTGTACTaGAAGAGCTGGGCAAACTCG +
Preference number: 4 (lower is better)
Translates to: VQQPKASGEASPFIPLQGNTALY*KSWANS
Trigger: CGAGTTTGCCCAGCTCTTCCAGTACAAGGCAGTGTT...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGCCATCCTCAGCTTGCTaGTACACTGAGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWPSSAC*YTEASV
Trigger: GACAGAGGCCTCAGTGTACCAGCAAGCTGAGGATGG...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGCTGTGCTCTCACGTaGTGGCTGCCAGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLGCALT*WLPARV
Trigger: AACCCTGGCTGGCAGCCACCACGTGAGAGCACAGCC...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGAGCCCTGCAGGTCTCTaGGCAGTGGAGGGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKSPAGL*AVEGPG
Trigger: GCCGGGGCCCTCCACTGCCCAGAGACCTGCAGGGCT...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGATGGCAGGGCAGCGGTaGCCTCCATCCTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERMAGQR*PPSWAT
Trigger: TGTGGCCCAGGATGGAGGCCACCGCTGCCCTGCCAT...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAACACCACACACGTaGGGCCAGGGAACACTCAGA +
Preference number: 4 (lower is better)
Translates to: TVPTLLRSEFGQRNSPLSQTPHT*GQGTLR
Trigger: TCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTTG...GGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTCAGGTTCTCCCTGCTTaGCAGCTTCTATCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSQVLPA*QLLSWA
Trigger: TGCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTG...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGGTTCTCCCTGCTTaGCAGCTTCTATCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PPSGHSEMRARALLLGRTQVLPA*QLLSWA
Trigger: TGCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTG...TGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ACCCCCTTGGGCGAGGCTAGCAGCTGCTCCATCCCGCTGAACCTGCTCCTTGAGCCAGAGCTCTTTTGCTaGGACGCACACAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: TPLGEASSCSIPLNLLLEPELFC*DAHSQG
Trigger: ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGG...CTCAAGGAGCAGGTTCAGCGGGATGGAGCAGCTGCTAGCCTCGCCCAAGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATAGCCCGGGTGGGTTaGCTTGCCTCCCCACACCCA +
Preference number: 4 (lower is better)
Translates to: TEREQANRTGASSTHRPVIARVG*LASPHP
Trigger: TGGGTGTGGGGAGGCAAGCCAACCCACCCGGGCTAT...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGCTCACAGGGTCAGTGTaGACCAGGGCCCGTGGAGCC +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERLTGSV*TRARGA
Trigger: GGCTCCACGGGCCCTGGTCCACACTGACCCTGTGAG...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS-3UTR TCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGGCCCCCTGTCCACCTTaGCCACCAGCTCCATGGACA +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTEREAPCPP*PPAPWT
Trigger: TGTCCATGGAGCTGGTGGTCAAGGTGGACAGGGGGC...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGGCCCCCTGTCCACCTTaGCCACCAGCTCCATGGACA +
Preference number: 4 (lower is better)
Translates to: GTTDLSRQKGVWQSDLDGAPCPP*PPAPWT
Trigger: TGTCCATGGAGCTGGTGGTCAAGGTGGACAGGGGGC...CCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000456708.5
CDS-3UTR TCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGCTCCTCCCCTGGGGGTaGATCACTATAGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TEREQANRTGASSTHRPVLLPWG*ITIGGL
Trigger: GAGGCCTCCTATAGTGATTCACCCCCAGGGGAGGAG...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AGGCTCTGCAGCTGTCCTTCCCACACGCTGCTCCCGGAGCTGGCTGTCCTGGCACAAAGAGGAACTGCATaGGCTCAAAGATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: RLCSCPSHTLLPELAVLAQRGTA*AQRSPR
Trigger: TCGGGGAGATCTTTGAGCTCATGCAGTTCCTCTTTG...TGCCAGGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR TCA 90 bp ACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCACGGGTTCAGTAGGGTaGAGACTGTGGTTCACCATC +
Preference number: 4 (lower is better)
Translates to: TVPTLLRSEFGQRNSPLSTGSVG*RLWFTI
Trigger: GATGGTGAACCACAGTCTTCACCCTACTGAACCCGT...GGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACACGGGTTCAGTAGGGTaGAGACTGTGGTTCACCATC +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHTGSVG*RLWFTI
Trigger: GATGGTGAACCACAGTCTTCACCCTACTGAACCCGT...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAACGGGTTCAGTAGGGTaGAGACTGTGGTTCACCATC +
Preference number: 4 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSTGSVG*RLWFTI
Trigger: GATGGTGAACCACAGTCTTCACCCTACTGAACCCGT...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCGCAACTCTTCCAAAATaGACACTGCCTTGTACTGGA +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGATLPK*TLPCTG
Trigger: TCCAGTACAAGGCAGTGTTCATTTTGGAAGAGTTGC...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR TCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGCAGCCGAGAGAAATaGGAGGGAACCCTGGGCACT +
Preference number: 4 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLGSREK*EGTLGT
Trigger: AGTGCCCAGGGTTCCCTCTCATTTCTCTCGGCTGCC...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCTACGATAAGCAGCAATaGGGGCCCAGGAAGACCTCA +
Preference number: 4 (lower is better)
Translates to: HHTLSQGGPGDEARVPCAYDKQQ*GPRKTS
Trigger: TGAGGTCTTCCTGGGCCCTCATTGCTGCTTATCGTA...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTACGATAAGCAGCAATaGGGGCCCAGGAAGACCTCA +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSYDKQQ*GPRKTS
Trigger: TGAGGTCTTCCTGGGCCCTCATTGCTGCTTATCGTA...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp ATCACTCTCCCGGCGGTGCCATACATGCCGCTCAGGTTCAGCCTGGGCCTGCTGTACGATAAGCAGCAATaGGGGCCCAGGAAGACCTCA +
Preference number: 4 (lower is better)
Translates to: ITLPAVPYMPLRFSLGLLYDKQQ*GPRKTS
Trigger: TGAGGTCTTCCTGGGCCCTCATTGCTGCTTATCGTA...CAGCAGGCCCAGGCTGAACCTGAGCGGCATGTATGGCACCGCCGGGAGAGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR TCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACTACGATAAGCAGCAATaGGGGCCCAGGAAGACCTCA +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHYDKQQ*GPRKTS
Trigger: TGAGGTCTTCCTGGGCCCTCATTGCTGCTTATCGTA...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCTATTCAGTGTCAAACTaGGCCATCACCACCGCCCCC +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVYSVSN*AITTAP
Trigger: GGGGGCGGTGGTGATGGCGCAGTTTGACACTGAATA...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGCACTTCTTGCCACGTaGAATACGGAAGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSALLAT*NTEGQT
Trigger: TGTCTGCCCTTCCGTATTGCACGTGGCAAGAAGTGC...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TCATCACTCTCCCGGCGGTGCCATACATGCCGCTCAGGTTCAGCCTGGGCCTGCGCACTTCTTGCCACGTaGAATACGGAAGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: SSLSRRCHTCRSGSAWACALLAT*NTEGQT
Trigger: TGTCTGCCCTTCCGTATTGCACGTGGCAAGAAGTGC...GCAGGCCCAGGCTGAACCTGAGCGGCATGTATGGCACCGCCGGGAGAGTGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGTGGATGCAGATCTGGTaGTCCTTCTGCGTCTGCACG +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQWMQIW*SFCVCT
Trigger: CGTGCAGACGCAGAAGGAGCACCAGATCTGCATCCA...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTGGGCAGAACACCATGTaGTGGTCCGGGATAAAGGAC +
Preference number: 4 (lower is better)
Translates to: GTARCGPELFCWDAHSQGGQNTM*WSGIKD
Trigger: GTCCTTTATCCCGGACCAGCACATGGTGTTCTGCCC...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp ATTCTGACAGCACCAGGCTCTGCAGCTGTCCTTCCCACACGCTGCTCCCGGAGCGGGCAGAACACCATGTaGTGGTCCGGGATAAAGGAC +
Preference number: 4 (lower is better)
Translates to: ILTAPGSAAVLPTRCSRSGQNTM*WSGIKD
Trigger: GTCCTTTATCCCGGACCAGCACATGGTGTTCTGCCC...GCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGCCTGGTGCTGTCAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGAGCCTAGGAAGGCTGTaGTCTCACGTGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: TEREQANRTGASSTHRPVSLGRL*SHVVAA
Trigger: GGCAGCCACCACGTGAGAGCACAGCCTTCCTAGGCT...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGGCGAGGCTAGCAGCTaGTCCATCCCGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERGEASS*SIPLNL
Trigger: CAGGTTCAGCGGGATGGAGCAGCTGCTAGCCTCGCC...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTGCCAGCTACCACATTTaGGATAAGGCTCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: VHGPYPAPLRVRAAQFTTASYHI*DKAQGL
Trigger: GAGCCCCTGAGCCTTATCGCAAATGTGGTAGCTGGC...AGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGCAGAGCCTGTCATGGTaGTGTGAGCCCGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTEREQSLSW*CEPGLW
Trigger: CCACAGGCCGGGCTCACAGCACCATGACAGGCTCTG...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGCGGCGGTGCCATACATaGCGCTCAGGTTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERRRCHT*RSGSAW
Trigger: CCAGGCTGAACCTGAGCGGCATGTATGGCACCGCCG...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp AGACGTAAAGAGGGCATTTTCAGGGAGCAGACCCCCTTGGGCGAGGCTAGCAGCCTCTGGAAGCCCCCATaGAGGGCAGTGGTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: RRKEGIFREQTPLGEASSLWKPP*RAVVSG
Trigger: TCCTGAGACCACTGCCCTGCATGGGGGCTTCCAGAG...GCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCCTGAAAATGCCCTCTTTACGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGGGGCCACAGGAACCCTaGTCAGCCTTGTCTATACCT +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQGPQEP*SALSIP
Trigger: AGGTATAGACAAGGCTGAGCAGGGTTCCTGTGGCCC...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGGGCCACAGGAACCCTaGTCAGCCTTGTCTATACCT +
Preference number: 4 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTGPQEP*SALSIP
Trigger: AGGTATAGACAAGGCTGAGCAGGGTTCCTGTGGCCC...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAAGCCCTCTGGGGACTTaGAGGGGTAGGTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTSPLGT*RGRCKG
Trigger: ACCTTTACACCTACCCCTGCAAGTCCCCAGAGGGCT...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp ATGTGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGAGCCCTCTGGGGACTTaGAGGGGTAGGTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: MCKKRREVSRLQHWARTASPLGT*RGRCKG
Trigger: ACCTTTACACCTACCCCTGCAAGTCCCCAGAGGGCT...CGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGCAGGGCACAGCGAGATaGGGGCCAGAGCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQQGTAR*GPELFC
Trigger: GCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTG...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACGAGGCCTCTAGGCGCTaGTATTCAGTGTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHEASRR*YSVSNC
Trigger: GCAGTTTGACACTGAATACCAGCGCCTAGAGGCCTC...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGGCAAAAAGGCGTCTaGCAGAGTGACCTTGACGGG +
Preference number: 4 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQRQKGV*QSDLDG
Trigger: CCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCT...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCAGAACACCATGTGCTaGTCCGGGATAAAGGACCTG +
Preference number: 4 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDQNTMC*SGIKDL
Trigger: CAGGTCCTTTATCCCGGACCAGCACATGGTGTTCTG...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACCAGAACACCATGTGCTaGTCCGGGATAAAGGACCTG +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHQNTMC*SGIKDL
Trigger: CAGGTCCTTTATCCCGGACCAGCACATGGTGTTCTG...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGAATCTCCAGGGCCCGTaGGCGCAGGCAGAAGATGAG +
Preference number: 4 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQNLQGP*AQAEDE
Trigger: CTCATCTTCTGCCTGCGCCCACGGGCCCTGGAGATT...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGTGTGCTCTCACGTGGTaGCTGCCAGCCAGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLCALTW*LPARVG
Trigger: ACCAACCCTGGCTGGCAGCCACCACGTGAGAGCACA...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCTGTGAGCCCGGCCTGTaGGCGCCTGCCCGGGTTGCA +
Preference number: 4 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFCEPGL*APARVA
Trigger: TGCAACCCGGGCAGGCGCCCACAGGCCGGGCTCACA...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGCCTCTCCTGGGGCTGTaGCAAGCCCAGTGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTEREPLLGL*QAQCWH
Trigger: GTGCCAACACTGGGCTTGCCACAGCCCCAGGAGAGG...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGCAGGTTCTCCCTGCTTaGCAGCTTCTATCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRQVLPA*QLLSWA
Trigger: TGCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTG...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACATCCCCACTCCACAGTTaGCACAGGTTCTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTSPLHS*HRFSLL
Trigger: AAGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGA...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTTCCCCACTCCACAGTTaGCACAGGTTCTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: GTARCGPELFCWDAHSQGSPLHS*HRFSLL
Trigger: AAGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGA...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GTGCTCTCACGTGGTGGCTGCCAGCCAGGGTTGGTGATGGCAAAGTGCATGAGTAGCGTTGAGGGGAGCTaGACGCTAGGGTCTTCACCC +
Preference number: 4 (lower is better)
Translates to: VLSRGGCQPGLVMAKCMSSVEGS*TLGSSP
Trigger: GGGTGAAGACCCTAGCGTCCAGCTCCCCTCAACGCT...ACTCATGCACTTTGCCATCACCAACCCTGGCTGGCAGCCACCACGTGAGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp CTGGAAGCCCCCATGCAGGGCAGTGGTCTCAGGAGCTCCAGGCCGGGGTGCTGCGCCCATCCTAAAAGATaGCAAGGGCAGCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: LEAPMQGSGLRSSRPGCCAHPKR*QGQQSI
Trigger: AATACTTTGCTGCCCTTGCCATCTTTTAGGATGGGC...GCAGCACCCCGGCCTGGAGCTCCTGAGACCACTGCCCTGCATGGGGGCTTCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCCCAGAGCTCTTTTGCTaGGACGCACACAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVPELFC*DAHSQG
Trigger: ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGG...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAACCAGAGCTCTTTTGCTaGGACGCACACAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQPELFC*DAHSQG
Trigger: ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGG...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR CAA 72 bp AGACGTAAAGAGGGCATTTTCAGGGAGCAGACCCCCTaGGGCGAGGCTAGCAGCTGCTCCATCCCGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RRKEGIFREQTP*GEASSCSIPLN
Trigger: GTTCAGCGGGATGGAGCAGCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCCTGAAAATGCCCTCTTTACGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR TCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCACAAAGAGGAACTGCATaGGCTCAAAGATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSQRGTA*AQRSPR
Trigger: TCGGGGAGATCTTTGAGCTCATGCAGTTCCTCTTTG...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTCAAAGAGGAACTGCATaGGCTCAAAGATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGQRGTA*AQRSPR
Trigger: TCGGGGAGATCTTTGAGCTCATGCAGTTCCTCTTTG...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGCTGGCACTACAGACTTaGGCAGGCAAAAAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRLALQT*AGKKAS
Trigger: AGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAG...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAAGGGAGCCATTTTCCTaGATCCTGGCACTACAGACT +
Preference number: 4 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSREPFS*ILALQT
Trigger: AGTCTGTAGTGCCAGGATTCAGGAAAATGGCTCCCT...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACAGGGAGCCATTTTCCTaGATCCTGGCACTACAGACT +
Preference number: 4 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDREPFS*ILALQT
Trigger: AGTCTGTAGTGCCAGGATTCAGGAAAATGGCTCCCT...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGCAACGACCTCCACGGTaGAGTTTCGGAAGAAGTCTA +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWQRPPR*SFGRSL
Trigger: TAGACTTCTTCCGAAACTTCACCGTGGAGGTCGTTG...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGGATAGCCACTGGGGATaGCCATGCTGGCGAACATCC +
Preference number: 4 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQDSHWG*PCWRTS
Trigger: GGATGTTCGCCAGCATGGTCATCCCCAGTGGCTATC...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AGACGTAAAGAGGGCATTTTCAGGGAGCAGACCCCCTTGGGCGAGGCTAGCAGCGATAGCCACTGGGGATaGCCATGCTGGCGAACATCC +
Preference number: 4 (lower is better)
Translates to: RRKEGIFREQTPLGEASSDSHWG*PCWRTS
Trigger: GGATGTTCGCCAGCATGGTCATCCCCAGTGGCTATC...GCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCCTGAAAATGCCCTCTTTACGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR TCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCTGTGGATGCATATTCTaGCAGCACCAGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVCGCIF*QHQALQ
Trigger: CTGCAGAGCCTGGTGCTGTCAGAATATGCATCCACA...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGTGTGGATGCATATTCTaGCAGCACCAGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRCGCIF*QHQALQ
Trigger: CTGCAGAGCCTGGTGCTGTCAGAATATGCATCCACA...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGCTGTGCCAGGATCTGTaGTGCCACCGTAGCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTERELCQDL*CHRSAS
Trigger: AGAGGCGCTACGGTGGCATCACAGATCCTGGCACAG...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGGGCTCAGGGTGCCTTaGTGCCGACTGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: RKAKAERNGSKRTEQEQAGLRVP*CRLPIF
Trigger: GAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCC...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGAGAAGCGGAGAGAGGTaGGCCGGCTGCAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKRSGER*AGCSTG
Trigger: CCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCT...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGTCCATGGACAGTATGTaGTCCTCTCCAGCCCTCGAT +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQSMDSM*SSPALD
Trigger: ATCGAGGGCTGGAGAGGAGCACATACTGTCCATGGA...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCTCCCCTCGGCGACGTaGACCAACAGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKLPSAT*TNRSSS
Trigger: GGAGGAGGACCTGTTGGTGCACGTCGCCGAGGGGAG...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGTTCAGTAGGGGTGCCAAGGTGACTTaGTCCCCTCGGCGACGTGCA +
Preference number: 4 (lower is better)
Translates to: DLSRQKGVWQSDLDGFSRGAKVT*SPRRRA
Trigger: TGCACGTCGCCGAGGGGAGCAAGTCACCTTGGCACC...CCTACTGAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR GCA 90 bp CTTCGGGCACGGGCTCAGGGTGCCTTGATGCCGACTGCCCATCTTCTGCCCACCAGGTTTTCAATATGGTaGCAAGGTGACTTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LRARAQGALMPTAHLLPTRFSIW*QGDLLP
Trigger: GGGGAGCAAGTCACCTTGGCACCATATTGAAAACCT...GGTGGGCAGAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCCGTGCCCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGATCTGGTGCTCCTTCTaGGTCTGCACGATCCGGGCC +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTEREIWCSF*VCTIRA
Trigger: GGCCCGGATCGTGCAGACGCAGAAGGAGCACCAGAT...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTGCTCACGTTTGTGGATaGAGATCTGGTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSAHVCG*RSGAPS
Trigger: AGAAGGAGCACCAGATCTGCATCCACAAACGTGAGC...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCGGATTTGTTAACCAGTaGCACCATGTAGTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: PRARHRPSSPFRAQRDAGGFVNQ*HHVVLE
Trigger: TTCCAGAACTACATGGTGGCACTGGTTAACAAATCC...GCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGCGGGACTGCAGCTCGTaGTCCAGCTCGTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTERERDCSS*SSSLKW
Trigger: CCACTTCAACGAGCTGGAGCACGAGCTGCAGTCCCG...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGTTGAGGCGGGACTaGAGCTCGTGCTCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKRLRRD*SSCSSS
Trigger: CGAGCTGGAGCACGAGCTGCAGTCCCGCCTCAACCG...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGATCACGCGGAGCAGCTaGTCAGGGCAGAACACCATG +
Preference number: 4 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLITRSS*SGQNTM
Trigger: CATGGTGTTCTGCCCTGAGCAGCTGCTCCGCGTGAT...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAAACTCGTCCCGGGTCTaGGAGCGGTGGGCATTACCC +
Preference number: 4 (lower is better)
Translates to: RKAKAERNGSKRTEQEQANSSRV*ERWALP
Trigger: GGGTAATGCCCACCGCTCGCAGACCCGGGACGAGTT...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR GCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGACTGAGGCCTCTGTCTaGCCAGCAGATAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: TEREQANRTGASSTHRPVTEASV*PADSHW
Trigger: CCAGTGGCTATCTGCTGGGCAGACAGAGGCCTCAGT...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGACTGAGGCCTCTGTCTaGCCAGCAGATAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQTEASV*PADSHW
Trigger: CCAGTGGCTATCTGCTGGGCAGACAGAGGCCTCAGT...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGCTCTCACGTGGTGGCTaGCAGCCAGGGTTGGTGATG +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERLSRGG*QPGLVM
Trigger: CATCACCAACCCTGGCTGGCAGCCACCACGTGAGAG...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGAGCCTAGGAAGGCTGTaGTCTCACGTGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERSLGRL*SHVVAA
Trigger: GGCAGCCACCACGTGAGAGCACAGCCTTCCTAGGCT...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGGTCCTTCCCACACGCTaGTCCCGGAGCTGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKVLPTR*SRSWLS
Trigger: GGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGAC...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTCAGCCTGGGCCTGCTaGTTGTGGAGCTGGTGCATA +
Preference number: 4 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQSAWAC*LWSWCI
Trigger: TATGCACCAGCTCCACAAGCAGCAGGCCCAGGCTGA...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCACGGCGGTGCCATACATaGCGCTCAGGTTCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: RKAKAERNGSKRTEQEQARRCHT*RSGSAW
Trigger: CCAGGCTGAACCTGAGCGGCATGTATGGCACCGCCG...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGTCACTCTCCCGGCGGTaGCATACATGCCGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERSLSRR*HTCRSG
Trigger: ACCTGAGCGGCATGTATGGCACCGCCGGGAGAGTGA...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGTCACTCTCCCGGCGGTaGCATACATGCCGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTERESLSRR*HTCRSG
Trigger: ACCTGAGCGGCATGTATGGCACCGCCGGGAGAGTGA...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGCCTTGATGCCGACTaGCCATCTTCTGCCCACCCT +
Preference number: 4 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQCLDAD*PSSAHP
Trigger: AGGGTGGGCAGAAGATGGGCAGTCGGCATCAAGGCA...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GGCCACAGCCTGACCTGCTCATCTATTGAGGGGGCTAGGGAAGGTTGCAGGGGTGGCACAGGTTCTCCCTaGTTGGCAGCTTCTATCGTG +
Preference number: 4 (lower is better)
Translates to: GHSLTCSSIEGAREGCRGGTGSP*LAASIV
Trigger: CACGATAGAAGCTGCCAAGCAGGGAGAACCTGTGCC...ACCCCTGCAACCTTCCCTAGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGGGCCACAGCCTGACCTaGTCATCTATTGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQGHSLT*SSIEGA
Trigger: AGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GGACTGGATAGACGTAAAGAGGGCATTTTCAGGGAGCAGACCCCCTTGGGCGAGGGAGCAGTCCCAGCATaGAGTGCAGCAGCCCAAAGC +
Preference number: 4 (lower is better)
Translates to: GLDRRKEGIFREQTPLGEGAVPA*SAAAQS
Trigger: GCTTTGGGCTGCTGCACTGCATGCTGGGACTGCTCC...CTCGCCCAAGGGGGTCTGCTCCCTGAAAATGCCCTCTTTACGTCTATCCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp AACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGAGAACACGGTCCCTACCCTaGTCCGCTCCGAGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: NRTGASSTHRPVMCKKRRTRSLP*SAPSSG
Trigger: GCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGT...TCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGACACGGTCCCTACCCTaGTCCGCTCCGAGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKTRSLP*SAPSSG
Trigger: GCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGT...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTTTGTGGATGCAGATCTaGTGCTCCTTCTGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: GTARCGPELFCWDAHSQGLWMQI*CSFCVC
Trigger: GCAGACGCAGAAGGAGCACCAGATCTGCATCCACAA...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ATGTGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGTTGTGGATGCAGATCTaGTGCTCCTTCTGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: MCKKRREVSRLQHWARTALWMQI*CSFCVC
Trigger: GCAGACGCAGAAGGAGCACCAGATCTGCATCCACAA...CGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAGTCAGCTCACGTTTGTaGATGCAGATCTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQVSSRL*MQIWCS
Trigger: GGAGCACCAGATCTGCATCCACAAACGTGAGCTGAC...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCGTCAGCTCACGTTTGTaGATGCAGATCTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVVSSRL*MQIWCS
Trigger: GGAGCACCAGATCTGCATCCACAAACGTGAGCTGAC...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGAGACGGTTGCTGAGGCGCTaGGCCAGCTCTAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: NRTGASSTHRPVMCKKRRRLLRR*ASSSRC
Trigger: GCAACGGCTAGAGCTGGCCCAGCGCCTCAGCAACCG...TCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAAGCAATTCATGTACTTaGAGGCGGGCTTGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSSNSCT*RRACSH
Trigger: GTGGCTACAAGCCCGCCTCCAAGTACATGAATTGCT...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAACACTGCCTTGTACTaGAAGAGCTGGGCAAACTCG +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHNTALY*KSWANS
Trigger: CGAGTTTGCCCAGCTCTTCCAGTACAAGGCAGTGTT...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR CCA 90 bp GGCCACAGCCTGACCTGCTCATCTATTGAGGGGGCTAGGGAAGGTTGCAGGGGTCCATCCTCAGCTTGCTaGTACACTGAGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GHSLTCSSIEGAREGCRGPSSAC*YTEASV
Trigger: GACAGAGGCCTCAGTGTACCAGCAAGCTGAGGATGG...ACCCCTGCAACCTTCCCTAGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGTGGCCTCCATCCTaGGCCACAGGAACCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKRWPPS*ATGTLL
Trigger: GAGCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCG...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GGACTGGATAGACGTAAAGAGGGCATTTTCAGGGAGCAGACCCCCTTGGGCGAGTGGCAGTACTGGGGCTaGGCTGGGGGCCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: GLDRRKEGIFREQTPLGEWQYWG*AGGQFL
Trigger: TAGAAACTGGCCCCCAGCCCAGCCCCAGTACTGCCA...CTCGCCCAAGGGGGTCTGCTCCCTGAAAATGCCCTCTTTACGTCTATCCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGAGCCGGCTGCAGCACTaGGCGAGAACTGCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKSRLQH*ARTAGE
Trigger: CTCACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCT...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACAAGACCTCAGTCTCCTaGGGGCCCATCCTAAAAGAT +
Preference number: 4 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDKTSVS*GPILKD
Trigger: ATCTTTTAGGATGGGCCCCCAGGAGACTGAGGTCTT...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AGCCATTTTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGAACAGCGACCCGGGTaGTTCCAGAGGCTCCGCCGG +
Preference number: 4 (lower is better)
Translates to: SHFPESWHYRLEQAKRRLEQRPG*FQRLRR
Trigger: CCGGCGGAGCCTCTGGAATCACCCGGGTCGCTGTTC...CAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR TCA 90 bp GACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGTTCAGTAGGCTCCTCCCCTGGGGGTaGATCACTATAGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: DLSRQKGVWQSDLDGFSRLLPWG*ITIGGL
Trigger: GAGGCCTCCTATAGTGATTCACCCCCAGGGGAGGAG...CCTACTGAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR TCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGAGGGAGCCATTTTCCTaGATCCTGGCACTACAGACT +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQREPFS*ILALQT
Trigger: AGTCTGTAGTGCCAGGATTCAGGAAAATGGCTCCCT...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGGCTTGTAGCCACGGTTaGGGCGGGACTGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKACSHG*GGTAAR
Trigger: ACGAGCTGCAGTCCCGCCTCAACCGTGGCTACAAGC...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCAACGACCTCCACGGTaGAGTTTCGGAAGAAGTCTA +
Preference number: 4 (lower is better)
Translates to: VHGPYPAPLRVRAAQFTTQRPPR*SFGRSL
Trigger: TAGACTTCTTCCGAAACTTCACCGTGGAGGTCGTTG...AGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGGATAGCCACTGGGGATaGCCATGCTGGCGAACATCC +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTEREDSHWG*PCWRTS
Trigger: GGATGTTCGCCAGCATGGTCATCCCCAGTGGCTATC...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGGTAAGGGCCACAGCCTaGCCTGCTCATCTATTGAGG +
Preference number: 4 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQVRATA*PAHLLR
Trigger: CCTCAATAGATGAGCAGGTCAGGCTGTGGCCCTTAC...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGTAAGGGCCACAGCCTaGCCTGCTCATCTATTGAGG +
Preference number: 4 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLVRATA*PAHLLR
Trigger: CCTCAATAGATGAGCAGGTCAGGCTGTGGCCCTTAC...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp AATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTCTCCCCTCGGCGACGTaGACCAACAGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NPGTTDLSRQKGVWQSDLLPSAT*TNRSSS
Trigger: GGAGGAGGACCTGTTGGTGCACGTCGCCGAGGGGAG...AAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR GCA 90 bp TTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTCTCCCCTCGGCGACGTaGACCAACAGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLNPGTTDLSRQKGVWQSLPSAT*TNRSSS
Trigger: GGAGGAGGACCTGTTGGTGCACGTCGCCGAGGGGAG...ACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR GCA 90 bp CCGGTGGATCCAGAAGACACCAGCAATGACCAGGATGGTGATAAGGGAGCCATTGGTGCCAAGGTGACTTaGTCCCCTCGGCGACGTGCA +
Preference number: 4 (lower is better)
Translates to: PVDPEDTSNDQDGDKGAIGAKVT*SPRRRA
Trigger: TGCACGTCGCCGAGGGGAGCAAGTCACCTTGGCACC...AATGGCTCCCTTATCACCATCCTGGTCATTGCTGGTGTCTTCTGGATCCACCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412355.5
CDS-3UTR GCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGACCACAAAGAGGAACTaGATGAGCTCAAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: RARALLLGRTQPRSPSSPTTKRN*MSSKIS
Trigger: GGAGATCTTTGAGCTCATGCAGTTCCTCTTTGTGGT...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGTGCACGATCCGGGCCTaGACTTCTTGCCACGTGCAA +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTERECTIRA*TSCHVQ
Trigger: TTGCACGTGGCAAGAAGTGCAGGCCCGGATCGTGCA...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTGCTCACGTTTGTGGATaGAGATCTGGTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GTARCGPELFCWDAHSQGAHVCG*RSGAPS
Trigger: AGAAGGAGCACCAGATCTGCATCCACAAACGTGAGC...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACATCTGGAAACGGAGGATaGGGTGGTAGATGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTSGNGG*GGRCPV
Trigger: AACTGGACATCTACCACCGCATCCTCCGTTTCCAGA...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTTCTGGAAACGGAGGATaGGGTGGTAGATGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: VHGPYPAPLRVRAAQFTTSGNGG*GGRCPV
Trigger: AACTGGACATCTACCACCGCATCCTCCGTTTCCAGA...AGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GGACTGGATAGACGTAAAGAGGGCATTTTCAGGGAGCAGACCCCCTTGGGCGAGATCACGCGGAGCAGCTaGTCAGGGCAGAACACCATG +
Preference number: 4 (lower is better)
Translates to: GLDRRKEGIFREQTPLGEITRSS*SGQNTM
Trigger: CATGGTGTTCTGCCCTGAGCAGCTGCTCCGCGTGAT...CTCGCCCAAGGGGGTCTGCTCCCTGAAAATGCCCTCTTTACGTCTATCCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp AACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGAGAGGCGAGGCTAGCAGCTaGTCCATCCCGCTGAACCTG +
Preference number: 4 (lower is better)
Translates to: NRTGASSTHRPVMCKKRRGEASS*SIPLNL
Trigger: CAGGTTCAGCGGGATGGAGCAGCTGCTAGCCTCGCC...TCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGCCAGCTACCACATTTaGGATAAGGCTCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLASYHI*DKAQGL
Trigger: GAGCCCCTGAGCCTTATCGCAAATGTGGTAGCTGGC...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCAGAGCCTGTCATGGTaGTGTGAGCCCGGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKQSLSW*CEPGLW
Trigger: CCACAGGCCGGGCTCACAGCACCATGACAGGCTCTG...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGTCAGCCTGGGCCTGCTaGTTGTGGAGCTGGTGCATA +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERSAWAC*LWSWCI
Trigger: TATGCACCAGCTCCACAAGCAGCAGGCCCAGGCTGA...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCACACGGTCCCTACCCTaGTCCGCTCCGAGTTCGGGC +
Preference number: 4 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFTRSLP*SAPSSG
Trigger: GCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGT...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGTCAAGGTTTTCAATATaGTGCCAAGGTGACTTGCTC +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTASRFSI*CQGDLL
Trigger: GAGCAAGTCACCTTGGCACCATATTGAAAACCTTGA...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCTCAAGGTTTTCAATATaGTGCCAAGGTGACTTGCTC +
Preference number: 4 (lower is better)
Translates to: VQQPKASGEASPFIPLQGSRFSI*CQGDLL
Trigger: GAGCAAGTCACCTTGGCACCATATTGAAAACCTTGA...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGCATTTTCCTGAATCCTaGCACTACAGACTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RARALLLGRTQPRSPSSPHFPES*HYRLEQ
Trigger: CTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATG...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACAACTTGATAAGCCGGTaGATCCAGAAGACACCAGCA +
Preference number: 4 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDNLISR*IQKTPA
Trigger: TGCTGGTGTCTTCTGGATCCACCGGCTTATCAAGTT...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAACTTGATAAGCCGGTaGATCCAGAAGACACCAGCA +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHNLISR*IQKTPA
Trigger: TGCTGGTGTCTTCTGGATCCACCGGCTTATCAAGTT...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTAGAAGGCTCCATTCTTaGCCAGCAGTGTCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGRRLHS*PAVSKE
Trigger: CTCTTTTGACACTGCTGGCCAAGAATGGAGCCTTCT...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGAGAAGGCTCCATTCTTaGCCAGCAGTGTCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWRRLHS*PAVSKE
Trigger: CTCTTTTGACACTGCTGGCCAAGAATGGAGCCTTCT...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGTCAGATTGTAAGGACTaGATAGACGTAAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QPKASGEASPFIPLQGTASDCKD*IDVKRA
Trigger: TGCCCTCTTTACGTCTATCCAGTCCTTACAATCTGA...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCCGGTGGCCTCCATCCTaGGCCACAGGAACCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFRWPPS*ATGTLL
Trigger: GAGCAGGGTTCCTGTGGCCCAGGATGGAGGCCACCG...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGCAAACACCACACACGTaGGGCCAGGGAACACTCAGA +
Preference number: 4 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLQTPHT*GQGTLR
Trigger: TCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTTG...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGTGTTGGCACCTCCCTTaGCCAGGCACAGACACACAA +
Preference number: 4 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLCWHLP*PGTDTQ
Trigger: TTGTGTGTCTGTGCCTGGCCAAGGGAGGTGCCAACA...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCCTCTCCTGGGGCTGTaGCAAGCCCAGTGTTGGCAC +
Preference number: 4 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKPLLGL*QAQCWH
Trigger: GTGCCAACACTGGGCTTGCCACAGCCCCAGGAGAGG...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GGCCTCCATCCTGGGCCACAGGAACCCTGCTCAGCCTTGTCTATACCTTGTGCATCCCCACTCCACAGTTaGCACAGGTTCTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: GLHPGPQEPCSALSIPCASPLHS*HRFSLL
Trigger: AAGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGA...TGCACAAGGTATAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCAAGACCTCAGTCTCCTaGGGGCCCATCCTAAAAGAT +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVKTSVS*GPILKD
Trigger: ATCTTTTAGGATGGGCCCCCAGGAGACTGAGGTCTT...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGGGCAAAGTGCATGAGTaGCAACTCTGTCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRGKVHE*QLCLSI
Trigger: GATGGAAAGACAGAGTTGTCACTCATGCACTTTGCC...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGTATTCAGTGTCAAACTaGGCCATCACCACCGCCCCC +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERYSVSN*AITTAP
Trigger: GGGGGCGGTGGTGATGGCGCAGTTTGACACTGAATA...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGAGGTTTTCAATATGGTaGCAAGGTGACTTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRRFSIW*QGDLLP
Trigger: GGGGAGCAAGTCACCTTGGCACCATATTGAAAACCT...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTAGGTTTTCAATATGGTaGCAAGGTGACTTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GTARCGPELFCWDAHSQGRFSIW*QGDLLP
Trigger: GGGGAGCAAGTCACCTTGGCACCATATTGAAAACCT...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTACCACAAAGAGGAACTaGATGAGCTCAAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: CKKRREVSRLQHWARTAGTTKRN*MSSKIS
Trigger: GGAGATCTTTGAGCTCATGCAGTTCCTCTTTGTGGT...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCATGCACGATCCGGGCCTaGACTTCTTGCCACGTGCAA +
Preference number: 4 (lower is better)
Translates to: RKAKAERNGSKRTEQEQACTIRA*TSCHVQ
Trigger: TTGCACGTGGCAAGAAGTGCAGGCCCGGATCGTGCA...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGATCTGGTGCTCCTTCTaGGTCTGCACGATCCGGGCC +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKIWCSF*VCTIRA
Trigger: GGCCCGGATCGTGCAGACGCAGAAGGAGCACCAGAT...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TCCATCCTGGGCCACAGGAACCCTGCTCAGCCTTGTCTATACCTTGTGCACCTGTGGATGCAGATCTGGTaGTCCTTCTGCGTCTGCACG +
Preference number: 4 (lower is better)
Translates to: SILGHRNPAQPCLYLVHLWMQIW*SFCVCT
Trigger: CGTGCAGACGCAGAAGGAGCACCAGATCTGCATCCA...CAGGTGCACAAGGTATAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGGGCAGAACACCATGTaGTGGTCCGGGATAAAGGAC +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERGQNTM*WSGIKD
Trigger: GTCCTTTATCCCGGACCAGCACATGGTGTTCTGCCC...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCTTGGTGATGGCAAAGTaGATGAGTGACAACTCTGTC +
Preference number: 4 (lower is better)
Translates to: HHTLSQGGPGDEARVPCALVMAK*MSDNSV
Trigger: GACAGAGTTGTCACTCATGCACTTTGCCATCACCAA...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TCCATCCTGGGCCACAGGAACCCTGCTCAGCCTTGTCTATACCTTGTGCACCTGGCCAGCTACCACATTTaGGATAAGGCTCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SILGHRNPAQPCLYLVHLASYHI*DKAQGL
Trigger: GAGCCCCTGAGCCTTATCGCAAATGTGGTAGCTGGC...CAGGTGCACAAGGTATAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR GCA 90 bp AACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGAGACTCTGGAAGCCCCCATaGAGGGCAGTGGTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: NRTGASSTHRPVMCKKRRLWKPP*RAVVSG
Trigger: TCCTGAGACCACTGCCCTGCATGGGGGCTTCCAGAG...TCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGCACAGGCCAGTGATGTaGAAGAAGCGGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTEREHRPVM*KKRREV
Trigger: CACCTCTCTCCGCTTCTTGCACATCACTGGCCTGTG...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGGGCCAGAGCTCTTTTaGTGGGACGCACACAGCCAA +
Preference number: 4 (lower is better)
Translates to: RKAKAERNGSKRTEQEQAGPELF*WDAHSQ
Trigger: TTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCC...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGCTAGGCCGGGTGTCTaGCACTCACTGTCACCCGCA +
Preference number: 4 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFARPGV*HSLSPA
Trigger: TGCGGGTGACAGTGAGTGGCAGACACCCGGCCTAGC...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396761.6
CDS-3UTR GCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGGGTTCCTGCGGATGTTaGAGGGATCGAGTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTEREGSCGC*RDRVSL
Trigger: AAGGCTGACTCGATCCCTGCAACATCCGCAGGAACC...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS-3UTR CCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGGAGGCCTCTAGGCGCTaGTATTCAGTGTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: TEREQANRTGASSTHRPVEASRR*YSVSNC
Trigger: GCAGTTTGACACTGAATACCAGCGCCTAGAGGCCTC...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTAACTTGATAAGCCGGTaGATCCAGAAGACACCAGCA +
Preference number: 4 (lower is better)
Translates to: GTARCGPELFCWDAHSQGNLISR*IQKTPA
Trigger: TGCTGGTGTCTTCTGGATCCACCGGCTTATCAAGTT...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GTGCTCTCACGTGGTGGCTGCCAGCCAGGGTTGGTGATGGCAAAGTGCATGAGTTTGTGGATGCAGATCTaGTGCTCCTTCTGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: VLSRGGCQPGLVMAKCMSLWMQI*CSFCVC
Trigger: GCAGACGCAGAAGGAGCACCAGATCTGCATCCACAA...ACTCATGCACTTTGCCATCACCAACCCTGGCTGGCAGCCACCACGTGAGAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGTCAGCTCACGTTTGTaGATGCAGATCTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLVSSRL*MQIWCS
Trigger: GGAGCACCAGATCTGCATCCACAAACGTGAGCTGAC...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAAGAAGGCTCCATTCTTaGCCAGCAGTGTCAAAAGAG +
Preference number: 4 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTRRLHS*PAVSKE
Trigger: CTCTTTTGACACTGCTGGCCAAGAATGGAGCCTTCT...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGTTGTACTGGAAGAGCTaGGCAAACTCGTCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERLYWKS*ANSSRV
Trigger: GACCCGGGACGAGTTTGCCCAGCTCTTCCAGTACAA...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR CCA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGAATCTCCAGGGCCCGTaGGCGCAGGCAGAAGATGAG +
Preference number: 4 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKNLQGP*AQAEDE
Trigger: CTCATCTTCTGCCTGCGCCCACGGGCCCTGGAGATT...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGCTGTGCTCTCACGTaGTGGCTGCCAGCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFGCALT*WLPARV
Trigger: AACCCTGGCTGGCAGCCACCACGTGAGAGCACAGCC...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGTCAGATTGTAAGGACTaGATAGACGTAAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RARALLLGRTQPRSPSSPSDCKD*IDVKRA
Trigger: TGCCCTCTTTACGTCTATCCAGTCCTTACAATCTGA...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGGCCCATCCTAAAAGATaGCAAGGGCAGCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWAHPKR*QGQQSI
Trigger: AATACTTTGCTGCCCTTGCCATCTTTTAGGATGGGC...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
3UTR CAA 72 bp AAGGCTGTGCTCTCACGTGGTGGCTGCCAGCCAGGGTaGGTGATGGCAAAGTGCATGAGTGACAACTCTGTC +
Preference number: 4 (lower is better)
Translates to: KAVLSRGGCQPG*VMAKCMSDNSV
Trigger: GACAGAGTTGTCACTCATGCACTTTGCCATCACCAACCCTGGCTGGCAGCCACCACGTGAGAGCACAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR TCA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAGCAACTCTTCCAAAATaGACACTGCCTTGTACTGGA +
Preference number: 4 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQATLPK*TLPCTG
Trigger: TCCAGTACAAGGCAGTGTTCATTTTGGAAGAGTTGC...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR TCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGGCACACACAGGCCAGTaGTGTGCAAGAAGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKAHTGQ*CARSGE
Trigger: CTCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGC...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GACCAGGATGGTGATAAGGGAGCCATTTTCCTGAATCCTGGCACTACAGACTTGGCCCCCTGTCCACCTTaGCCACCTCAGGAACAGCGA +
Preference number: 4 (lower is better)
Translates to: DQDGDKGAIFLNPGTTDLAPCPP*PPQEQR
Trigger: TCGCTGTTCCTGAGGTGGTCAAGGTGGACAGGGGGC...CAAGTCTGTAGTGCCAGGATTCAGGAAAATGGCTCCCTTATCACCATCCTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412355.5
CDS-3UTR GCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGACCACAAAGAGGAACTaGATGAGCTCAAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQTTKRN*MSSKIS
Trigger: GGAGATCTTTGAGCTCATGCAGTTCCTCTTTGTGGT...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGACCACAAAGAGGAACTaGATGAGCTCAAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRTTKRN*MSSKIS
Trigger: GGAGATCTTTGAGCTCATGCAGTTCCTCTTTGTGGT...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGGCACTTCTTGCCACGTaGAATACGGAAGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTEREALLAT*NTEGQT
Trigger: TGTCTGCCCTTCCGTATTGCACGTGGCAAGAAGTGC...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGGCTCACGTTTGTGGATaGAGATCTGGTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQAHVCG*RSGAPS
Trigger: AGAAGGAGCACCAGATCTGCATCCACAAACGTGAGC...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACGGATTTGTTAACCAGTaGCACCATGTAGTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHGFVNQ*HHVVLE
Trigger: TTCCAGAACTACATGGTGGCACTGGTTAACAAATCC...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp ACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGTTCAGTCTCTCCAGCCCTCGATaGTCTGCAGCTCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: TDLSRQKGVWQSDLDGFSLSSPR*SAAQEQ
Trigger: CTGTTCCTGAGCTGCAGAGCATCGAGGGCTGGAGAG...ACTGAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000456708.5
CDS-3UTR CCA 90 bp CACCACACTCTGAGCCAAGGGGGTCCTGGGGATGAGGCTAGAGTCCCGTGTGCCTCAAGGTTTTCAATATaGTGCCAAGGTGACTTGCTC +
Preference number: 4 (lower is better)
Translates to: HHTLSQGGPGDEARVPCASRFSI*CQGDLL
Trigger: GAGCAAGTCACCTTGGCACCATATTGAAAACCTTGA...GGCACACGGGACTCTAGCCTCATCCCCAGGACCCCCTTGGCTCAGAGTGTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGTTCAGTAGGGTGAGGCAAAAAGGCGTCTaGCAGAGTGACCTTGACGGG +
Preference number: 4 (lower is better)
Translates to: LSRQKGVWQSDLDGFSRVRQKGV*QSDLDG
Trigger: CCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCT...CACCCTACTGAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR CCA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGCATTTTCCTGAATCCTaGCACTACAGACTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRHFPES*HYRLEQ
Trigger: CTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATG...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TCCATCCTGGGCCACAGGAACCCTGCTCAGCCTTGTCTATACCTTGTGCACCTGGTCAGCTCACGTTTGTaGATGCAGATCTGGTGCTCC +
Preference number: 4 (lower is better)
Translates to: SILGHRNPAQPCLYLVHLVSSRL*MQIWCS
Trigger: GGAGCACCAGATCTGCATCCACAAACGTGAGCTGAC...CAGGTGCACAAGGTATAGACAAGGCTGAGCAGGGTTCCTGTGGCCCAGGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCATTGTACTGGAAGAGCTaGGCAAACTCGTCCCGGGTC +
Preference number: 4 (lower is better)
Translates to: RKAKAERNGSKRTEQEQALYWKS*ANSSRV
Trigger: GACCCGGGACGAGTTTGCCCAGCTCTTCCAGTACAA...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR CCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGTGGCAGCTTCTATCGTaGGCAGCCCTCTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKWQLLS*AALWGL
Trigger: AAGTCCCCAGAGGGCTGCCCACGATAGAAGCTGCCA...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCAGCGTTGAGGGGAGCTaGACGCTAGGGTCTTCACCC +
Preference number: 4 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFSVEGS*TLGSSP
Trigger: GGGTGAAGACCCTAGCGTCCAGCTCCCCTCAACGCT...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCCATCCTAAAAGATaGCAAGGGCAGCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTAHPKR*QGQQSI
Trigger: AATACTTTGCTGCCCTTGCCATCTTTTAGGATGGGC...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp ACCAGCAATGACCAGGATGGTGATAAGGGAGCCATTTTCCTGAATCCTGGCACTCTCCTCCCCTGGGGGTaGATCACTATAGGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TSNDQDGDKGAIFLNPGTLLPWG*ITIGGL
Trigger: GAGGCCTCCTATAGTGATTCACCCCCAGGGGAGGAG...AGTGCCAGGATTCAGGAAAATGGCTCCCTTATCACCATCCTGGTCATTGCTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412355.5
CDS-3UTR TCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGCAAAGAGGAACTGCATaGGCTCAAAGATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERQRGTA*AQRSPR
Trigger: TCGGGGAGATCTTTGAGCTCATGCAGTTCCTCTTTG...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGTTCAGTAGGCTGGCACTACAGACTTaGGCAGGCAAAAAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: DLSRQKGVWQSDLDGFSRLALQT*AGKKAS
Trigger: AGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAG...CCTACTGAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR TCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCATGTGGATGCATATTCTaGCAGCACCAGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RKAKAERNGSKRTEQEQACGCIF*QHQALQ
Trigger: CTGCAGAGCCTGGTGCTGTCAGAATATGCATCCACA...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGTTCAGTAGGGTGAAGACTGTGTATTCAGTGTCAAACTaGGCCATCACCACCGCCCCC +
Preference number: 4 (lower is better)
Translates to: QKGVWQSDLDGFSRVKTVYSVSN*AITTAP
Trigger: GGGGGCGGTGGTGATGGCGCAGTTTGACACTGAATA...CACAGTCTTCACCCTACTGAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR GCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGAGGTTTTCAATATGGTaGCAAGGTGACTTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: TEREQANRTGASSTHRPVRFSIW*QGDLLP
Trigger: GGGGAGCAAGTCACCTTGGCACCATATTGAAAACCT...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCCGGGCCTGCACTTCTTaGCACGTGCAATACGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFRACTS*HVQYGR
Trigger: CCTTCCGTATTGCACGTGGCAAGAAGTGCAGGCCCG...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCGGATTTGTTAACCAGTaGCACCATGTAGTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVGFVNQ*HHVVLE
Trigger: TTCCAGAACTACATGGTGGCACTGGTTAACAAATCC...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGGGATTTGTTAACCAGTaGCACCATGTAGTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQGFVNQ*HHVVLE
Trigger: TTCCAGAACTACATGGTGGCACTGGTTAACAAATCC...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGAGCCCTCTGGGGACTTaGAGGGGTAGGTGTAAAGGT +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKSPLGT*RGRCKG
Trigger: ACCTTTACACCTACCCCTGCAAGTCCCCAGAGGGCT...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCACAGGCCAGTGATGTaGAAGAAGCGGAGAGAGGTG +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKHRPVM*KKRREV
Trigger: CACCTCTCTCCGCTTCTTGCACATCACTGGCCTGTG...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGAGAAGGCAAAAAGGCGTCTaGCAGAGTGACCTTGACGGG +
Preference number: 4 (lower is better)
Translates to: NRTGASSTHRPVMCKKRRRQKGV*QSDLDG
Trigger: CCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCT...TCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCATTGTGGATGCAGATCTaGTGCTCCTTCTGCGTCTGC +
Preference number: 4 (lower is better)
Translates to: RKAKAERNGSKRTEQEQALWMQI*CSFCVC
Trigger: GCAGACGCAGAAGGAGCACCAGATCTGCATCCACAA...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGAGCAATTCATGTACTTaGAGGCGGGCTTGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERSNSCT*RRACSH
Trigger: GTGGCTACAAGCCCGCCTCCAAGTACATGAATTGCT...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCTGGCAGCTTCTATCGTaGGCAGCCCTCTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFWQLLS*AALWGL
Trigger: AAGTCCCCAGAGGGCTGCCCACGATAGAAGCTGCCA...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGAGATCCCCACTCCACAGTTaGCACAGGTTCTCCCTGCTT +
Preference number: 4 (lower is better)
Translates to: NRTGASSTHRPVMCKKRRSPLHS*HRFSLL
Trigger: AAGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGA...TCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCCAGAGCTCTTTTGCTaGGACGCACACAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKPELFC*DAHSQG
Trigger: ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGG...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCTGGCACTACAGACTTaGGCAGGCAAAAAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKLALQT*AGKKAS
Trigger: AGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAG...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCACAACGACCTCCACGGTaGAGTTTCGGAAGAAGTCTA +
Preference number: 4 (lower is better)
Translates to: RKAKAERNGSKRTEQEQAQRPPR*SFGRSL
Trigger: TAGACTTCTTCCGAAACTTCACCGTGGAGGTCGTTG...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGGGCAAAGTGCATGAGTaGCAACTCTGTCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTEREGKVHE*QLCLSI
Trigger: GATGGAAAGACAGAGTTGTCACTCATGCACTTTGCC...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TTTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTATTCAGTGTCAAACTaGGCCATCACCACCGCCCCC +
Preference number: 4 (lower is better)
Translates to: FPESWHYRLEQAKRRLAEYSVSN*AITTAP
Trigger: GGGGGCGGTGGTGATGGCGCAGTTTGACACTGAATA...CTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR GCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCATCTGGAAACGGAGGATaGGGTGGTAGATGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RKAKAERNGSKRTEQEQASGNGG*GGRCPV
Trigger: AACTGGACATCTACCACCGCATCCTCCGTTTCCAGA...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCAGGCAAAAAGGCGTCTaGCAGAGTGACCTTGACGGG +
Preference number: 4 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFRQKGV*QSDLDG
Trigger: CCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCT...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGAACTTGATAAGCCGGTaGATCCAGAAGACACCAGCA +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERNLISR*IQKTPA
Trigger: TGCTGGTGTCTTCTGGATCCACCGGCTTATCAAGTT...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAAGCAATTCATGTACTTaGAGGCGGGCTTGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: RKAKAERNGSKRTEQEQASNSCT*RRACSH
Trigger: GTGGCTACAAGCCCGCCTCCAAGTACATGAATTGCT...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp AACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGAGACAGAACACCATGTGCTaGTCCGGGATAAAGGACCTG +
Preference number: 4 (lower is better)
Translates to: NRTGASSTHRPVMCKKRRQNTMC*SGIKDL
Trigger: CAGGTCCTTTATCCCGGACCAGCACATGGTGTTCTG...TCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCAGAACACCATGTGCTaGTCCGGGATAAAGGACCTG +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKQNTMC*SGIKDL
Trigger: CAGGTCCTTTATCCCGGACCAGCACATGGTGTTCTG...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTCGCTGCTCCCGGAGCTaGCTGTCCTGGCATCCACCC +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFRCSRS*LSWHPP
Trigger: GGGTGGATGCCAGGACAGCCAGCTCCGGGAGCAGCG...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTCGCTGCTCCCGGAGCTaGCTGTCCTGGCATCCACCC +
Preference number: 4 (lower is better)
Translates to: WQGQQSISILLLQFRNLLRCSRS*LSWHPP
Trigger: GGGTGGATGCCAGGACAGCCAGCTCCGGGAGCAGCG...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GCCATTTTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGACGGGTTCAGTAGGGTaGAGACTGTGGTTCACCATC +
Preference number: 4 (lower is better)
Translates to: AIFLNPGTTDLSRQKGVWTGSVG*RLWFTI
Trigger: GATGGTGAACCACAGTCTTCACCCTACTGAACCCGT...CCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR TCA 90 bp TTTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGACGGGTTCAGTAGGGTaGAGACTGTGGTTCACCATC +
Preference number: 4 (lower is better)
Translates to: FPESWHYRLEQAKRRLAETGSVG*RLWFTI
Trigger: GATGGTGAACCACAGTCTTCACCCTACTGAACCCGT...CTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR TCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCCTGGCACTACAGACTTaGGCAGGCAAAAAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFLALQT*AGKKAS
Trigger: AGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAG...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGCAACTCTTCCAAAATaGACACTGCCTTGTACTGGA +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERATLPK*TLPCTG
Trigger: TCCAGTACAAGGCAGTGTTCATTTTGGAAGAGTTGC...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR GCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTCTCCCCTCGGCGACGTaGACCAACAGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFLPSAT*TNRSSS
Trigger: GGAGGAGGACCTGTTGGTGCACGTCGCCGAGGGGAG...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGGCTCACGTTTGTGGATaGAGATCTGGTGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKAHVCG*RSGAPS
Trigger: AGAAGGAGCACCAGATCTGCATCCACAAACGTGAGC...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp AACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGAGATCTGGAAACGGAGGATaGGGTGGTAGATGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: NRTGASSTHRPVMCKKRRSGNGG*GGRCPV
Trigger: AACTGGACATCTACCACCGCATCCTCCGTTTCCAGA...TCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTTCCAAAATGAACACTaGCTTGTACTGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQFQNEH*LVLEEL
Trigger: CAGCTCTTCCAGTACAAGGCAGTGTTCATTTTGGAA...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR GCA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGTTGGTGATGGCAAAGTaGATGAGTGACAACTCTGTC +
Preference number: 4 (lower is better)
Translates to: ELDARVFTLTQSKSRTERLVMAK*MSDNSV
Trigger: GACAGAGTTGTCACTCATGCACTTTGCCATCACCAA...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GGACTGGATAGACGTAAAGAGGGCATTTTCAGGGAGCAGACCCCCTTGGGCGAGTTGGTGATGGCAAAGTaGATGAGTGACAACTCTGTC +
Preference number: 4 (lower is better)
Translates to: GLDRRKEGIFREQTPLGELVMAK*MSDNSV
Trigger: GACAGAGTTGTCACTCATGCACTTTGCCATCACCAA...CTCGCCCAAGGGGGTCTGCTCCCTGAAAATGCCCTCTTTACGTCTATCCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp CGGTGGATCCAGAAGACACCAGCAATGACCAGGATGGTGATAAGGGAGCCATTTGAGGCCTCTAGGCGCTaGTATTCAGTGTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: RWIQKTPAMTRMVIREPFEASRR*YSVSNC
Trigger: GCAGTTTGACACTGAATACCAGCGCCTAGAGGCCTC...AAATGGCTCCCTTATCACCATCCTGGTCATTGCTGGTGTCTTCTGGATCCACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412355.5
CDS-3UTR CCA 90 bp GCCATTTTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGGAGGCCTCTAGGCGCTaGTATTCAGTGTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: AIFLNPGTTDLSRQKGVWEASRR*YSVSNC
Trigger: GCAGTTTGACACTGAATACCAGCGCCTAGAGGCCTC...CCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR CCA 90 bp CATTTTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAAGGCAAAAAGGCGTCTaGCAGAGTGACCTTGACGGG +
Preference number: 4 (lower is better)
Translates to: HFPESWHYRLEQAKRRLARQKGV*QSDLDG
Trigger: CCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCT...TGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR CCA 90 bp GGACTGGATAGACGTAAAGAGGGCATTTTCAGGGAGCAGACCCCCTTGGGCGAGCATTTTCCTGAATCCTaGCACTACAGACTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GLDRRKEGIFREQTPLGEHFPES*HYRLEQ
Trigger: CTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATG...CTCGCCCAAGGGGGTCTGCTCCCTGAAAATGCCCTCTTTACGTCTATCCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CCA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGTCAGATTGTAAGGACTaGATAGACGTAAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TEREQANRTGASSTHRPVSDCKD*IDVKRA
Trigger: TGCCCTCTTTACGTCTATCCAGTCCTTACAATCTGA...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TTTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGCAAAGAGGAACTGCATaGGCTCAAAGATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: FPESWHYRLEQAKRRLAEQRGTA*AQRSPR
Trigger: TCGGGGAGATCTTTGAGCTCATGCAGTTCCTCTTTG...CTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR TCA 90 bp CATTTTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCACTGGCACTACAGACTTaGGCAGGCAAAAAGGCGTCT +
Preference number: 4 (lower is better)
Translates to: HFPESWHYRLEQAKRRLALALQT*AGKKAS
Trigger: AGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAG...TGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR TCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTACAGGATGCGGTTGCTaGGGCGCTGGGCCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFTGCGC*GAGPAL
Trigger: TAGAGCTGGCCCAGCGCCTCAGCAACCGCATCCTGT...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCTGGCGAACATCCATCTaGGCAAAGGAGCAGGTATCT +
Preference number: 4 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFWRTSI*AKEQVS
Trigger: AGATACCTGCTCCTTTGCTCAGATGGATGTTCGCCA...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTAGGGCCCCGGCAGGATaGGCCAGCTACCACATTTGC +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFRAPAG*ASYHIC
Trigger: GCAAATGTGGTAGCTGGCTCATCCTGCCGGGGCCCT...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTGGGCTCAGGGTGCCTTaGTGCCGACTGCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: WQGQQSISILLLQFRNLLGLRVP*CRLPIF
Trigger: GAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCC...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTTCTAGCACCACACTCTaGGCCAAGGGGGTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFSSTTL*AKGVLG
Trigger: CCCCAGGACCCCCTTGGCTCAGAGTGTGGTGCTAGA...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CCGGTGGATCCAGAAGACACCAGCAATGACCAGGATGGTGATAAGGGAGCCATTAGGTTTTCAATATGGTaGCAAGGTGACTTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PVDPEDTSNDQDGDKGAIRFSIW*QGDLLP
Trigger: GGGGAGCAAGTCACCTTGGCACCATATTGAAAACCT...AATGGCTCCCTTATCACCATCCTGGTCATTGCTGGTGTCTTCTGGATCCACCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412355.5
CDS-3UTR GCA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGAAAGTATTTCCATCCTaGTCCTACAATTTAGAAACC +
Preference number: 4 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQKVFPS*SYNLET
Trigger: GGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTT...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCAAAGTATTTCCATCCTaGTCCTACAATTTAGAAACC +
Preference number: 4 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVKVFPS*SYNLET
Trigger: GGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTT...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTCAGCCCTCGATGCTCTaGAGCTGCTGTCCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: WQGQQSISILLLQFRNLLQPSML*SCCPCS
Trigger: GCTGCACGGACAGCAGCTGCAGAGCATCGAGGGCTG...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS-3UTR CCA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGTCAAGGTTTTCAATATaGTGCCAAGGTGACTTGCTC +
Preference number: 4 (lower is better)
Translates to: LDARVFTLTQSKSRTERESRFSI*CQGDLL
Trigger: GAGCAAGTCACCTTGGCACCATATTGAAAACCTTGA...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTCGCTCAGGTTCAGCCTaGGCCTGCTGCTTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: WQGQQSISILLLQFRNLLRSGSA*ACCLWS
Trigger: GCTCCACAAGCAGCAGGCCCAGGCTGAACCTGAGCG...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTAGAGGAGCCGTCCCATaGCAGGCAGACGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFRGAVP*QADGMA
Trigger: TGCCATCCCGTCTGCCTGCCATGGGACGGCTCCTCT...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp CATTTTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCACAAAGAGGAACTGCATaGGCTCAAAGATCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: HFPESWHYRLEQAKRRLAQRGTA*AQRSPR
Trigger: TCGGGGAGATCTTTGAGCTCATGCAGTTCCTCTTTG...TGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR TCA 90 bp GATCCAGAAGACACCAGCAATGACCAGGATGGTGATAAGGGAGCCATTTTCCTGAGGGAGCCATTTTCCTaGATCCTGGCACTACAGACT +
Preference number: 4 (lower is better)
Translates to: DPEDTSNDQDGDKGAIFLREPFS*ILALQT
Trigger: AGTCTGTAGTGCCAGGATTCAGGAAAATGGCTCCCT...CAGGAAAATGGCTCCCTTATCACCATCCTGGTCATTGCTGGTGTCTTCTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412355.5
CDS-3UTR TCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTGGCAGCCGAGAGAAATaGGAGGGAACCCTGGGCACT +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFGSREK*EGTLGT
Trigger: AGTGCCCAGGGTTCCCTCTCATTTCTCTCGGCTGCC...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TTTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGAGGTTTTCAATATGGTaGCAAGGTGACTTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: FPESWHYRLEQAKRRLAERFSIW*QGDLLP
Trigger: GGGGAGCAAGTCACCTTGGCACCATATTGAAAACCT...CTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR GCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTCGGGACTGCAGCTCGTaGTCCAGCTCGTTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: WQGQQSISILLLQFRNLLRDCSS*SSSLKW
Trigger: CCACTTCAACGAGCTGGAGCACGAGCTGCAGTCCCG...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTAGCCTAGGAAGGCTGTaGTCTCACGTGGTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WQGQQSISILLLQFRNLLSLGRL*SHVVAA
Trigger: GGCAGCCACCACGTGAGAGCACAGCCTTCCTAGGCT...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTCACTCTCCCGGCGGTaGCATACATGCCGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: WQGQQSISILLLQFRNLLSLSRR*HTCRSG
Trigger: ACCTGAGCGGCATGTATGGCACCGCCGGGAGAGTGA...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTCTCTGGAAGCCCCCATaGAGGGCAGTGGTCTCAGGA +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFLWKPP*RAVVSG
Trigger: TCCTGAGACCACTGCCCTGCATGGGGGCTTCCAGAG...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp GGCCACAGCCTGACCTGCTCATCTATTGAGGGGGCTAGGGAAGGTTGCAGGGGTAAAGTATTTCCATCCTaGTCCTACAATTTAGAAACC +
Preference number: 4 (lower is better)
Translates to: GHSLTCSSIEGAREGCRGKVFPS*SYNLET
Trigger: GGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTT...ACCCCTGCAACCTTCCCTAGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTCAGGGCACAGCGAGATaGGGGCCAGAGCTCTTTTGC +
Preference number: 4 (lower is better)
Translates to: WQGQQSISILLLQFRNLLQGTAR*GPELFC
Trigger: GCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTG...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGTTCAGTAGGTCAAGGTTTTCAATATaGTGCCAAGGTGACTTGCTC +
Preference number: 4 (lower is better)
Translates to: DLSRQKGVWQSDLDGFSRSRFSI*CQGDLL
Trigger: GAGCAAGTCACCTTGGCACCATATTGAAAACCTTGA...CCTACTGAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR CCA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCATTTTCCTGAATCCTaGCACTACAGACTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKHFPES*HYRLEQ
Trigger: CTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATG...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTGGCAGTACTGGGGCTaGGCTGGGGGCCAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: WQGQQSISILLLQFRNLLWQYWG*AGGQFL
Trigger: TAGAAACTGGCCCCCAGCCCAGCCCCAGTACTGCCA...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTAGCGTTGAGGGGAGCTaGACGCTAGGGTCTTCACCC +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFSVEGS*TLGSSP
Trigger: GGGTGAAGACCCTAGCGTCCAGCTCCCCTCAACGCT...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTACCACAAAGAGGAACTaGATGAGCTCAAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: FLNPGTTDLSRQKGVWQSTTKRN*MSSKIS
Trigger: GGAGATCTTTGAGCTCATGCAGTTCCTCTTTGTGGT...ACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR GCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTCGGGCCTGCACTTCTTaGCACGTGCAATACGGAAGG +
Preference number: 4 (lower is better)
Translates to: WQGQQSISILLLQFRNLLRACTS*HVQYGR
Trigger: CCTTCCGTATTGCACGTGGCAAGAAGTGCAGGCCCG...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGTTCCAAAATGAACACTaGCTTGTACTGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: QANRTGASSTHRPVMCKKFQNEH*LVLEEL
Trigger: CAGCTCTTCCAGTACAAGGCAGTGTTCATTTTGGAA...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR GCA 90 bp CAGGATGGTGATAAGGGAGCCATTTTCCTGAATCCTGGCACTACAGACTTGAGCACCACAAAGAGGAACTaGATGAGCTCAAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: QDGDKGAIFLNPGTTDLSTTKRN*MSSKIS
Trigger: GGAGATCTTTGAGCTCATGCAGTTCCTCTTTGTGGT...GCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATGGCTCCCTTATCACCATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412355.5
CDS-3UTR GCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTGGCACAGGTTCTCCCTaGTTGGCAGCTTCTATCGTG +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFGTGSP*LAASIV
Trigger: CACGATAGAAGCTGCCAAGCAGGGAGAACCTGTGCC...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GGAGCCATTTTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTCAAGGTTTTCAATATaGTGCCAAGGTGACTTGCTC +
Preference number: 4 (lower is better)
Translates to: GAIFLNPGTTDLSRQKGVSRFSI*CQGDLL
Trigger: GAGCAAGTCACCTTGGCACCATATTGAAAACCTTGA...GACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATGGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412355.5
CDS-3UTR CCA 90 bp GACCAGGATGGTGATAAGGGAGCCATTTTCCTGAATCCTGGCACTACAGACTTGCATTTTCCTGAATCCTaGCACTACAGACTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: DQDGDKGAIFLNPGTTDLHFPES*HYRLEQ
Trigger: CTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATG...CAAGTCTGTAGTGCCAGGATTCAGGAAAATGGCTCCCTTATCACCATCCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412355.5
CDS-3UTR CCA 90 bp ATTTTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGCATTTTCCTGAATCCTaGCACTACAGACTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: IFLNPGTTDLSRQKGVWQHFPES*HYRLEQ
Trigger: CTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAATG...CTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR CCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTCCATCCTCAGCTTGCTaGTACACTGAGGCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: WQGQQSISILLLQFRNLLPSSAC*YTEASV
Trigger: GACAGAGGCCTCAGTGTACCAGCAAGCTGAGGATGG...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCTCAGATTGTAAGGACTaGATAGACGTAAAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFSDCKD*IDVKRA
Trigger: TGCCCTCTTTACGTCTATCCAGTCCTTACAATCTGA...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTTGTGGATGCATATTCTaGCAGCACCAGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFCGCIF*QHQALQ
Trigger: CTGCAGAGCCTGGTGCTGTCAGAATATGCATCCACA...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAAAAGTATTTCCATCCTaGTCCTACAATTTAGAAACC +
Preference number: 4 (lower is better)
Translates to: RKAKAERNGSKRTEQEQAKVFPS*SYNLET
Trigger: GGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTT...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTTGGCGAACATCCATCTaGGCAAAGGAGCAGGTATCT +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFWRTSI*AKEQVS
Trigger: AGATACCTGCTCCTTTGCTCAGATGGATGTTCGCCA...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR TCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTGGCAAAGTGCATGAGTaGCAACTCTGTCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFGKVHE*QLCLSI
Trigger: GATGGAAAGACAGAGTTGTCACTCATGCACTTTGCC...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CCA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTGCCCATCCTAAAAGATaGCAAGGGCAGCAAAGTATT +
Preference number: 4 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFAHPKR*QGQQSI
Trigger: AATACTTTGCTGCCCTTGCCATCTTTTAGGATGGGC...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR GCA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTTCCAAAATGAACACTaGCTTGTACTGGAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: WQGQQSISILLLQFRNLLFQNEH*LVLEEL
Trigger: CAGCTCTTCCAGTACAAGGCAGTGTTCATTTTGGAA...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS GCA 90 bp GGCTCGGCTCGGCTCGGCGCGACCCGCGGCGCTAGGCCGGGTGTCTaGCACTCACTGTCACCCGCAGCCAGGCTGGCCAATAAGCACGGG +
Preference number: 5 (lower is better)
Translates to: GSARLGATRGARPGV*HSLSPAARLANKHG
Trigger: CCCGTGCTTATTGGCCAGCCTGGCTGCGGGTGACAGTGAGTGGCAGACACCCGGCCTAGCGCCGCGGGTCGCGCCGAGCCGAGCCGAGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396761.6
CDS-3UTR CAA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCGGGCGCCTGCCCGGGTaGCAGCGGGGAGAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: VQQPKASGEASPFIPLQGGRLPG*QRGEGA
Trigger: CGCTCCTTCTCCCCGCTGCAACCCGGGCAGGCGCCC...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCCCCGGGTGGGTTGGCTaGCCTCCCCACACCCAGCCG +
Preference number: 5 (lower is better)
Translates to: VQQPKASGEASPFIPLQGPGWVG*PPHTQP
Trigger: CGGCTGGGTGTGGGGAGGCAAGCCAACCCACCCGGG...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS CCA 90 bp CTCACAGGGTCAGTGTGGACCAGGGCCCGTGGAGCCCCGGCCGGCTaGGCCTGGGCTCAGGGGTTCCTGCGGATGTTGCAGGGATCGAGT +
Preference number: 5 (lower is better)
Translates to: LTGSVWTRARGAPAG*AWAQGFLRMLQGSS
Trigger: ACTCGATCCCTGCAACATCCGCAGGAACCCCTGAGCCCAGGCCCAGCCGGCCGGGGCTCCACGGGCCCTGGTCCACACTGACCCTGTGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000409618.5
ENST00000432520.5
ENST00000443140.5
ENST00000488833.1
CDS CCA 90 bp TGCTTGTGGAGCCAGAGCCTGTCATGGTGCTGTGAGCCCGGCCTGTaGGCGCCTGCCCGGGTTGCAGCGGGGAGAAGGAGCGCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: CLWSQSLSWCCEPGL*APARVAAGRRSAGQ
Trigger: CTGCCCTGCGCTCCTTCTCCCCGCTGCAACCCGGGCAGGCGCCCACAGGCCGGGCTCACAGCACCATGACAGGCTCTGGCTCCACAAGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429920.1
CDS-3UTR CAA 90 bp ACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCGGGCGCCTGCCCGGGTaGCAGCGGGGAGAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: TVPTLLRSEFGQRNSPLSGRLPG*QRGEGA
Trigger: CGCTCCTTCTCCCCGCTGCAACCCGGGCAGGCGCCC...GGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTGGGCGCCTGCCCGGGTaGCAGCGGGGAGAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: GTARCGPELFCWDAHSQGGRLPG*QRGEGA
Trigger: CGCTCCTTCTCCCCGCTGCAACCCGGGCAGGCGCCC...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGCGCCCCCTGTCCACCTaGACCACCAGCTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: QPKASGEASPFIPLQGTARPLST*TTSSMD
Trigger: GTCCATGGAGCTGGTGGTCAAGGTGGACAGGGGGCG...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCCGCCCCCTGTCCACCTaGACCACCAGCTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: VQQPKASGEASPFIPLQGRPLST*TTSSMD
Trigger: GTCCATGGAGCTGGTGGTCAAGGTGGACAGGGGGCG...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGTGGTGCCAAGGTGACTaGCTCCCCTCGGCGACGTGC +
Preference number: 5 (lower is better)
Translates to: QPKASGEASPFIPLQGTAWCQGD*LPSATC
Trigger: GCACGTCGCCGAGGGGAGCAAGTCACCTTGGCACCA...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCATCCACAGGATGCGGTaGCTGAGGCGCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VQQPKASGEASPFIPLQGIHRMR*LRRWAS
Trigger: GCTGGCCCAGCGCCTCAGCAACCGCATCCTGTGGAT...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGCGCCCCCTGTCCACCTaGACCACCTCAGGAACAGCG +
Preference number: 5 (lower is better)
Translates to: QPKASGEASPFIPLQGTARPLST*TTSGTA
Trigger: CGCTGTTCCTGAGGTGGTCAAGGTGGACAGGGGGCG...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396761.6
CDS CCA 90 bp GTTGCAGGGATCGAGTCAGCCTTACAGCTGATAGCCCGGGTGGGTTaGCTTGCCTCCCCACACCCAGCCGCGGCGACCGTGGACCGGAGT +
Preference number: 5 (lower is better)
Translates to: VAGIESALQLIARVG*LASPHPAAATVDRS
Trigger: ACTCCGGTCCACGGTCGCCGCGGCTGGGTGTGGGGAGGCAAGCCAACCCACCCGGGCTATCAGCTGTAAGGCTGACTCGATCCCTGCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409618.5
ENST00000432520.5
ENST00000443140.5
ENST00000488833.1
CDS-3UTR CAA 90 bp ACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCAGGGAGCAGACCCCCTaGGGCGAGGCTAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: TVPTLLRSEFGQRNSPLSREQTP*GEASSC
Trigger: GCAGCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCCT...GGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGGTGGCAAGCCCAGTGTaGGCACCTCCCTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RARALLLGRTQPRSPSSPVASPV*APPLAR
Trigger: CCTGGCCAAGGGAGGTGCCAACACTGGGCTTGCCAC...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTCGCCCCCTGTCCACCTaGACCACCAGCTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSRPLST*TTSSMD
Trigger: GTCCATGGAGCTGGTGGTCAAGGTGGACAGGGGGCG...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAATCCACAGGATGCGGTaGCTGAGGCGCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSIHRMR*LRRWAS
Trigger: GCTGGCCCAGCGCCTCAGCAACCGCATCCTGTGGAT...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACATCCACAGGATGCGGTaGCTGAGGCGCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: APLRVRAAQFTTLPKPDHIHRMR*LRRWAS
Trigger: GCTGGCCCAGCGCCTCAGCAACCGCATCCTGTGGAT...GTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGAGGGAGCAGACCCCCTaGGGCGAGGCTAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRREQTP*GEASSC
Trigger: GCAGCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCCT...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp ATGTGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGAGGGAGCAGACCCCCTaGGGCGAGGCTAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: MCKKRREVSRLQHWARTAREQTP*GEASSC
Trigger: GCAGCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCCT...CGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACGTGGCAAGCCCAGTGTaGGCACCTCCCTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDVASPV*APPLAR
Trigger: CCTGGCCAAGGGAGGTGCCAACACTGGGCTTGCCAC...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGGATAGCCCGGGTGGGTaGGCTTGCCTCCCCACACCC +
Preference number: 5 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQDSPGG*ACLPTP
Trigger: GGGTGTGGGGAGGCAAGCCAACCCACCCGGGCTATC...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS-3UTR CAA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGCCGGGCCTGCACTTCTaGCCACGTGCAATACGGAAG +
Preference number: 5 (lower is better)
Translates to: RARALLLGRTQPRSPSSPPGLHF*PRAIRK
Trigger: CTTCCGTATTGCACGTGGCAAGAAGTGCAGGCCCGG...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CTTCGGGCACGGGCTCAGGGTGCCTTGATGCCGACTGCCCATCTTCTGCCCACCGGCTGCCAGCCAGGGTaGGTGATGGCAAAGTGCATG +
Preference number: 5 (lower is better)
Translates to: LRARAQGALMPTAHLLPTGCQPG*VMAKCM
Trigger: CATGCACTTTGCCATCACCAACCCTGGCTGGCAGCC...GGTGGGCAGAAGATGGGCAGTCGGCATCAAGGCACCCTGAGCCCGTGCCCGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CAA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGCTCCCCACTCCACAGTaGGCACAGGTTCTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: RARALLLGRTQPRSPSSPLPTPQ*AQVLPA
Trigger: AGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGAG...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTCCGGGCCTGCACTTCTaGCCACGTGCAATACGGAAG +
Preference number: 5 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSPGLHF*PRAIRK
Trigger: CTTCCGTATTGCACGTGGCAAGAAGTGCAGGCCCGG...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGAGGGAGCAGACCCCCTaGGGCGAGGCTAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQREQTP*GEASSC
Trigger: GCAGCTGCTAGCCTCGCCCAAGGGGGTCTGCTCCCT...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp AACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGAGAGGGCGCCTGCCCGGGTaGCAGCGGGGAGAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: NRTGASSTHRPVMCKKRRGRLPG*QRGEGA
Trigger: CGCTCCTTCTCCCCGCTGCAACCCGGGCAGGCGCCC...TCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACTCCCCACTCCACAGTaGGCACAGGTTCTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: PPSGHSEMRARALLLGRTLPTPQ*AQVLPA
Trigger: AGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGAG...TGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS CCA 90 bp ACACCCCACCAAGAGGAGGCCAAGCATGGGGCAGGAAGGCTGCAGTaGGGAAGAAGCACCCTTCCAGCCCAGGACTACGAGCACTTCCTC +
Preference number: 5 (lower is better)
Translates to: TPHQEEAKHGAGRLQ*GRSTLPAQDYEHFL
Trigger: GAGGAAGTGCTCGTAGTCCTGGGCTGGAAGGGTGCTTCTTCCCCACTGCAGCCTTCCTGCCCCATGCTTGGCCTCCTCTTGGTGGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434939.1
CDS-3UTR CAA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCAGAGGCAGGAGGGATTaGTTAACCAGTGCCACCATG +
Preference number: 5 (lower is better)
Translates to: VQQPKASGEASPFIPLQGRGRRD*LTSATM
Trigger: CATGGTGGCACTGGTTAACAAATCCCTCCTGCCTCT...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp ATGTGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGCTGCCAGCCAGGGTaGGTGATGGCAAAGTGCATG +
Preference number: 5 (lower is better)
Translates to: MCKKRREVSRLQHWARTAGCQPG*VMAKCM
Trigger: CATGCACTTTGCCATCACCAACCCTGGCTGGCAGCC...CGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCGTGTTGGCACCTCCCTaGGCCAGGCACAGACACACA +
Preference number: 5 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVVLAPP*ARHRHT
Trigger: TGTGTGTCTGTGCCTGGCCAAGGGAGGTGCCAACAC...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGGTGGCAAGCCCAGTGTaGGCACCTCCCTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQVASPV*APPLAR
Trigger: CCTGGCCAAGGGAGGTGCCAACACTGGGCTTGCCAC...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGACAGGTTCTCCCTGCTaGGCAGCTTCTATCGTGGGC +
Preference number: 5 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWTGSPC*AASIVG
Trigger: GCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTGT...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS GCA 90 bp CCATGGACAGTATGTGCTCCTCTCCAGCCCTCGATGCTCTGCAGCTaGTGGAGGAGAAGATGTCAGGCCCCAGAGAGTGGGCAGTGGGGA +
Preference number: 5 (lower is better)
Translates to: PWTVCAPLQPSMLCS*WRRRCQAPESGQWG
Trigger: TCCCCACTGCCCACTCTCTGGGGCCTGACATCTTCTCCTCCAGCAGCTGCAGAGCATCGAGGGCTGGAGAGGAGCACATACTGTCCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434939.1
CDS GCA 90 bp CCAGCTCCATGGACAGTATGTGCTCCTCTCCAGCCCTCGATGCTCTaGAGCTGCTGGAGGAGAAGATGTCAGGCCCCAGAGAGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: PAPWTVCAPLQPSML*SCWRRRCQAPESGQ
Trigger: CTGCCCACTCTCTGGGGCCTGACATCTTCTCCTCCAGCAGCTGCAGAGCATCGAGGGCTGGAGAGGAGCACATACTGTCCATGGAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434939.1
CDS-3UTR CAA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCACCTGGCACTACAGACTaGAGCAGGCAAAAAGGCGTC +
Preference number: 5 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSPGTTD*SRQKGV
Trigger: GACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGG...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp ACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCCTGGCACTACAGACTaGAGCAGGCAAAAAGGCGTC +
Preference number: 5 (lower is better)
Translates to: TVPTLLRSEFGQRNSPLSPGTTD*SRQKGV
Trigger: GACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGG...GGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GCTCTGCAGCTGTCCTTCCCACACGCTGCTCCCGGAGCTGGCTGTCCTGGCATCAGAGGCAGGAGGGATTaGTTAACCAGTGCCACCATG +
Preference number: 5 (lower is better)
Translates to: ALQLSFPHAAPGAGCPGIRGRRD*LTSATM
Trigger: CATGGTGGCACTGGTTAACAAATCCCTCCTGCCTCT...GATGCCAGGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CAA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGGATCAGCTCAAAGTaGTACTTGAGACCACGGGTG +
Preference number: 5 (lower is better)
Translates to: QPKASGEASPFIPLQGTARISSK*YLRPRV
Trigger: CACCCGTGGTCTCAAGTACAACTTTGAGCTGATCCT...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGGAACCCTGCTCAGCCTaGTCTATACCTTGTGCACCT +
Preference number: 5 (lower is better)
Translates to: RARALLLGRTQPRSPSSPEPCSA*SIPCAP
Trigger: AGGTGCACAAGGTATAGACAAGGCTGAGCAGGGTTC...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp AAACACCACACACGTGGGGCCAGGGAACACTCAGAGGAGCCGTCCCATGGCAGGACAGGTTCTCCCTGCTaGGCAGCTTCTATCGTGGGC +
Preference number: 5 (lower is better)
Translates to: KHHTRGAREHSEEPSHGRTGSPC*AASIVG
Trigger: GCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTGT...CCTGCCATGGGACGGCTCCTCTGAGTGTTCCCTGGCCCCACGTGTGTGGTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS GCA 90 bp ATCCACAGGATGCGGTTGCTGAGGCGCTGGGCCAGCTCTAGCCGTTaGCCCCCACGTTTGTACTCGGCCTTGAGGCTCCATTCATTGAGA +
Preference number: 5 (lower is better)
Translates to: IHRMRLLRRWASSSR*PPRLYSALRLHSLR
Trigger: TCTCAATGAATGGAGCCTCAAGGCCGAGTACAAACGTGGGGGGCAACGGCTAGAGCTGGCCCAGCGCCTCAGCAACCGCATCCTGTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
CDS-3UTR CAA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGCCGGGCCTGCACTTCTaGCCACGTGCAATACGGAAG +
Preference number: 5 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLPGLHF*PRAIRK
Trigger: CTTCCGTATTGCACGTGGCAAGAAGTGCAGGCCCGG...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp ACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCTCTGTCAGCTCACGTTaGTGGATGCAGATCTGGTGC +
Preference number: 5 (lower is better)
Translates to: TVPTLLRSEFGQRNSPLSSVSSR*WMQIWC
Trigger: GCACCAGATCTGCATCCACAAACGTGAGCTGACAGA...GGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGAGAGGCAGGAGGGATTaGTTAACCAGTGCCACCATG +
Preference number: 5 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWRGRRD*LTSATM
Trigger: CATGGTGGCACTGGTTAACAAATCCCTCCTGCCTCT...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCAAAATGAACACTGCCTaGTACTGGAAGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VQQPKASGEASPFIPLQGKMNTA*YWKSWA
Trigger: TGCCCAGCTCTTCCAGTACAAGGCAGTGTTCATTTT...GCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR CAA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGGGCTGCCAGCCAGGGTaGGTGATGGCAAAGTGCATG +
Preference number: 5 (lower is better)
Translates to: TEREQANRTGASSTHRPVGCQPG*VMAKCM
Trigger: CATGCACTTTGCCATCACCAACCCTGGCTGGCAGCC...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGCTGCCAGCCAGGGTaGGTGATGGCAAAGTGCATG +
Preference number: 5 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLGCQPG*VMAKCM
Trigger: CATGCACTTTGCCATCACCAACCCTGGCTGGCAGCC...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTGAACCCTGCTCAGCCTaGTCTATACCTTGTGCACCT +
Preference number: 5 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSEPCSA*SIPCAP
Trigger: AGGTGCACAAGGTATAGACAAGGCTGAGCAGGGTTC...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGTGGCAAGCCCAGTGTaGGCACCTCCCTTGGCCAGG +
Preference number: 5 (lower is better)
Translates to: RKAKAERNGSKRTEQEQAVASPV*APPLAR
Trigger: CCTGGCCAAGGGAGGTGCCAACACTGGGCTTGCCAC...TGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGGGGTTCCTGCGGATGTaGCAGGGATCGAGTCAGCCT +
Preference number: 5 (lower is better)
Translates to: TEREQANRTGASSTHRPVGFLRM*QGSSQP
Trigger: AGGCTGACTCGATCCCTGCAACATCCGCAGGAACCC...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS-3UTR CAA 90 bp ACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGTTCCGCCCCCTGTCCACCTaGACCACCAGCTCCATGGAC +
Preference number: 5 (lower is better)
Translates to: TTDLSRQKGVWQSDLDGFRPLST*TTSSMD
Trigger: GTCCATGGAGCTGGTGGTCAAGGTGGACAGGGGGCG...GAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000456708.5
CDS-3UTR CAA 90 bp CAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGCTGTGGTTCACCATCTaGTTGGCAAATAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: QPKASGEASPFIPLQGTALWFTI*LANRMS
Trigger: TGACATCCTATTTGCCAACAAGATGGTGAACCACAG...CGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGGGGCTGTGGAGGATCAGCTCAAAGTaGTACTTGAGACCACGGGTG +
Preference number: 5 (lower is better)
Translates to: ESRVPSVPRPQIPLLGLWRISSK*YLRPRV
Trigger: CACCCGTGGTCTCAAGTACAACTTTGAGCTGATCCT...CCACAGCCCCAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCACCCTCCAGCCCGTTGAGGCTCCATTCATaGAGAAACAGAGAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: RARALLLGRTQPRSPSSPLRLHS*RNREPG
Trigger: ACCTGGCTCTCTGTTTCTCAATGAATGGAGCCTCAA...CGGGCTGGAGGGTGACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp TGCAAGAAGCGGAGAGAGGTGAGCCGGCTGCAGCACTGGGCGAGAACTGCGGGTCGTTTGTACTCGGCCTaGAGGCTCCATTCATTGAGA +
Preference number: 5 (lower is better)
Translates to: CKKRREVSRLQHWARTAGRLYSA*RLHSLR
Trigger: TCTCAATGAATGGAGCCTCAAGGCCGAGTACAAACG...ACCCGCAGTTCTCGCCCAGTGCTGCAGCCGGCTCACCTCTCTCCGCTTCTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp AGGCATCGCCCTTCATCCCCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTCGTTTGTACTCGGCCTaGAGGCTCCATTCATTGAGA +
Preference number: 5 (lower is better)
Translates to: RHRPSSPFRAQRDAGQSSRLYSA*RLHSLR
Trigger: TCTCAATGAATGGAGCCTCAAGGCCGAGTACAAACG...AGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGGGGATGAAGGGCGATGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGATCCACAGGATGCGGTaGCTGAGGCGCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKIHRMR*LRRWAS
Trigger: GCTGGCCCAGCGCCTCAGCAACCGCATCCTGTGGAT...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp TGCAGTGCAGCAGCCCAAAGCCTCGGGCGAGGCATCGCCCTTCATCCCCCTTCAGAAGGCATAGAGGATTaGCCATATGAGGATGAGGGG +
Preference number: 5 (lower is better)
Translates to: CSAAAQSLGRGIALHPPSEGIED*PYEDEG
Trigger: CCCCTCATCCTCATATGGCAAATCCTCTATGCCTTC...TGAAGGGGGATGAAGGGCGATGCCTCGCCCGAGGCTTTGGGCTGCTGCACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGTGTTGGCACCTCCCTaGGCCAGGCACAGACACACA +
Preference number: 5 (lower is better)
Translates to: ELDARVFTLTQSKSRTERVLAPP*ARHRHT
Trigger: TGTGTGTCTGTGCCTGGCCAAGGGAGGTGCCAACAC...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGACAGGTTCTCCCTGCTaGGCAGCTTCTATCGTGGGC +
Preference number: 5 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQTGSPC*AASIVG
Trigger: GCCCACGATAGAAGCTGCCAAGCAGGGAGAACCTGT...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS GCA 90 bp GTCAGCTCACGTTTGTGGATGCAGATCTGGTGCTCCTTCTGCGTCTaGACGATCCGGGCCTGCACTTCTTGCCACGTGCAATACGGAAGG +
Preference number: 5 (lower is better)
Translates to: VSSRLWMQIWCSFCV*TIRACTSCHVQYGR
Trigger: CCTTCCGTATTGCACGTGGCAAGAAGTGCAGGCCCGGATCGTGCAGACGCAGAAGGAGCACCAGATCTGCATCCACAAACGTGAGCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
ENST00000431715.5
CDS GCA 90 bp TTCCATCAACTCTCCCTATGGCTGTCATATCCAAGAACTCACACTTaGTCCCCTCGGCGACGTGCACCAACAGGTCCTCCTCCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: FHQLSLWLSYPRTHT*SPRRRAPTGPPPLG
Trigger: CCCCAGGGGAGGAGGACCTGTTGGTGCACGTCGCCGAGGGGAGCAAGTGTGAGTTCTTGGATATGACAGCCATAGGGAGAGTTGATGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486766.2
CDS-3UTR CAA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGCCTGGCACTACAGACTaGAGCAGGCAAAAAGGCGTC +
Preference number: 5 (lower is better)
Translates to: TEREQANRTGASSTHRPVPGTTD*SRQKGV
Trigger: GACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGG...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CCCTTCAGGGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAAGGATCAGCTCAAAGTaGTACTTGAGACCACGGGTG +
Preference number: 5 (lower is better)
Translates to: PFRAQRDAGQSSFAGTHTRISSK*YLRPRV
Trigger: CACCCGTGGTCTCAAGTACAACTTTGAGCTGATCCT...TGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCCCTGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp TCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCACAGGAAGGCATAGAGGATTaGCCATATGAGGATGAGGGG +
Preference number: 5 (lower is better)
Translates to: SAPSSGSAIHHSPKAGPQEGIED*PYEDEG
Trigger: CCCCTCATCCTCATATGGCAAATCCTCTATGCCTTC...CTGTGGTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp TTTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGCGCCCCCTGTCCACCTaGACCACCTCAGGAACAGCG +
Preference number: 5 (lower is better)
Translates to: FPESWHYRLEQAKRRLAERPLST*TTSGTA
Trigger: CGCTGTTCCTGAGGTGGTCAAGGTGGACAGGGGGCG...CTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412355.5
CDS-3UTR CAA 90 bp CCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAGCCGGACCTGTGGTTCACCATCTaGTTGGCAAATAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: PAPLRVRAAQFTTLPKPDLWFTI*LANRMS
Trigger: TGACATCCTATTTGCCAACAAGATGGTGAACCACAG...GTCCGGCTTTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp ATGAGGCTAGAGTCCCGTGTGCCCTCGGTTCCTAGGCCCCAAATTCCTCTCCTGTCTGTCAGCTCACGTTaGTGGATGCAGATCTGGTGC +
Preference number: 5 (lower is better)
Translates to: MRLESRVPSVPRPQIPLLSVSSR*WMQIWC
Trigger: GCACCAGATCTGCATCCACAAACGTGAGCTGACAGA...CAGGAGAGGAATTTGGGGCCTAGGAACCGAGGGCACACGGGACTCTAGCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GGCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTAGCTCAAAGTTGTACTaGAGACCACGGGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: GTARCGPELFCWDAHSQGSSKLY*RPRVKK
Trigger: CTTCTTCACCCGTGGTCTCAAGTACAACTTTGAGCT...ACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GCACAGCGAGATGCGGGCCAGAGCTCTTTTGCTGGGACGCACACAGCCAAGGTCTTGAGGCTCCATTCATaGAGAAACAGAGAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: AQRDAGQSSFAGTHTAKVLRLHS*RNREPG
Trigger: ACCTGGCTCTCTGTTTCTCAATGAATGGAGCCTCAA...GACCTTGGCTGTGTGCGTCCCAGCAAAAGAGCTCTGGCCCGCATCTCGCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTTTGAGGCTCCATTCATaGAGAAACAGAGAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: VHGPYPAPLRVRAAQFTTLRLHS*RNREPG
Trigger: ACCTGGCTCTCTGTTTCTCAATGAATGGAGCCTCAA...AGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGACCGTGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GTCCCTACCCTGCTCCGCTCCGAGTTCGGGCAGCGCAATTCACCACTCTCCCAAAAAATGAACACTGCCTaGTACTGGAAGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: VPTLLRSEFGQRNSPLSQKMNTA*YWKSWA
Trigger: TGCCCAGCTCTTCCAGTACAAGGCAGTGTTCATTTT...TTGGGAGAGTGGTGAATTGCGCTGCCCGAACTCGGAGCGGAGCAGGGTAGGGAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR CAA 90 bp AACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGAGACTCCCCACTCCACAGTaGGCACAGGTTCTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: NRTGASSTHRPVMCKKRRLPTPQ*AQVLPA
Trigger: AGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGAG...TCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS GCA 90 bp AGTTCTGTCAGCTCACGTTTGTGGATGCAGATCTGGTGCTCCTTCTaGGTCTGCACGATCCGGGCCTGCACTTCTTGCCACGTGCAATAC +
Preference number: 5 (lower is better)
Translates to: SSVSSRLWMQIWCSF*VCTIRACTSCHVQY
Trigger: GTATTGCACGTGGCAAGAAGTGCAGGCCCGGATCGTGCAGACGCAGAAGGAGCACCAGATCTGCATCCACAAACGTGAGCTGACAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
ENST00000431715.5
CDS GCA 90 bp GTGCTCTCACGTGGTGGCTGCCAGCCAGGGTTGGTGATGGCAAAGTaGATGAGTGACAACTCTGTCTTTCCATCCTCAGCTTGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: VLSRGGCQPGLVMAK*MSDNSVFPSSACWY
Trigger: GTACCAGCAAGCTGAGGATGGAAAGACAGAGTTGTCACTCATGCACTTTGCCATCACCAACCCTGGCTGGCAGCCACCACGTGAGAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
ENST00000429920.1
CDS-3UTR CAA 90 bp TTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGTTCAGTAGGGTGCCTGGCACTACAGACTaGAGCAGGCAAAAAGGCGTC +
Preference number: 5 (lower is better)
Translates to: LSRQKGVWQSDLDGFSRVPGTTD*SRQKGV
Trigger: GACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGG...CACCCTACTGAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR CAA 90 bp CCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACCCTGGCACTACAGACTaGAGCAGGCAAAAAGGCGTC +
Preference number: 5 (lower is better)
Translates to: PGTTDLSRQKGVWQSDLDPGTTD*SRQKGV
Trigger: GACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGG...GTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR CAA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGAGGATCAGCTCAAAGTaGTACTTGAGACCACGGGTG +
Preference number: 5 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQRISSK*YLRPRV
Trigger: CACCCGTGGTCTCAAGTACAACTTTGAGCTGATCCT...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGCGTTTGTACTCGGCCTaGAGGCTCCATTCATTGAGA +
Preference number: 5 (lower is better)
Translates to: ERNGSKRTEQEQAAHTGQRLYSA*RLHSLR
Trigger: TCTCAATGAATGGAGCCTCAAGGCCGAGTACAAACG...CTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGGAAGGCATAGAGGATTaGCCATATGAGGATGAGGGG +
Preference number: 5 (lower is better)
Translates to: TEREQANRTGASSTHRPVEGIED*PYEDEG
Trigger: CCCCTCATCCTCATATGGCAAATCCTCTATGCCTTC...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GGCCACAGCCTGACCTGCTCATCTATTGAGGGGGCTAGGGAAGGTTGCAGGGGTAAAATGAACACTGCCTaGTACTGGAAGAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GHSLTCSSIEGAREGCRGKMNTA*YWKSWA
Trigger: TGCCCAGCTCTTCCAGTACAAGGCAGTGTTCATTTT...ACCCCTGCAACCTTCCCTAGCCCCCTCAATAGATGAGCAGGTCAGGCTGTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409618.5
CDS-3UTR CAA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGGAACCCTGCTCAGCCTaGTCTATACCTTGTGCACCT +
Preference number: 5 (lower is better)
Translates to: LDARVFTLTQSKSRTEREEPCSA*SIPCAP
Trigger: AGGTGCACAAGGTATAGACAAGGCTGAGCAGGGTTC...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS CCA 90 bp CAGCCCTTACCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTaGCAGAGTGACCTTGACGGGTTCAGTAGGGTGAAGACTGTGGTT +
Preference number: 5 (lower is better)
Translates to: QPLPGTTDLSRQKGV*QSDLDGFSRVKTVV
Trigger: AACCACAGTCTTCACCCTACTGAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGTAAGGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466217.5
CDS-3UTR CAA 90 bp ACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGAGCTCAAAGTTGTACTaGAGACCACGGGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: TEREQANRTGASSTHRPVSSKLY*RPRVKK
Trigger: CTTCTTCACCCGTGGTCTCAAGTACAACTTTGAGCT...CACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGGAGGAAGGCATAGAGGATTaGCCATATGAGGATGAGGGG +
Preference number: 5 (lower is better)
Translates to: LDARVFTLTQSKSRTEREEGIED*PYEDEG
Trigger: CCCCTCATCCTCATATGGCAAATCCTCTATGCCTTC...CTCCCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS TCA 90 bp GCCAGCGAAGAAGGCTCCATTCTTGGCCAGCAGTGTCAAAAGAGGTaGCAAGAAGCAATTCATGTACTTGGAGGCGGGCTTGTAGCCACG +
Preference number: 5 (lower is better)
Translates to: ASEEGSILGQQCQKR*QEAIHVLGGGLVAT
Trigger: CGTGGCTACAAGCCCGCCTCCAAGTACATGAATTGCTTCTTGTCACCTCTTTTGACACTGCTGGCCAAGAATGGAGCCTTCTTCGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
CDS TCA 90 bp TATGGTGTCCTCTTGACTTGCAGCCCTTACCTGGCACTACAGACTTaGGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGTTCA +
Preference number: 5 (lower is better)
Translates to: YGVLLTCSPYLALQT*AGKKASGRVTLTGS
Trigger: TGAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGTAAGGGCTGCAAGTCAAGAGGACACCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466217.5
CDS CCA 90 bp ATGGTGCCAAGGTGCTGTGGGATAGGAACAGAGATGTCAGAGCCCTaGGAGAACACAAGCCCCTTGCTCTCTCCATGTTCTTCCATCAAC +
Preference number: 5 (lower is better)
Translates to: MVPRCCGIGTEMSEP*ENTSPLLSPCSSIN
Trigger: GTTGATGGAAGAACATGGAGAGAGCAAGGGGCTTGTGTTCTCCCAGGGCTCTGACATCTCTGTTCCTATCCCACAGCACCTTGGCACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486766.2
CDS-3UTR CAA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGTCTGTCAGCTCACGTTaGTGGATGCAGATCTGGTGC +
Preference number: 5 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKSVSSR*WMQIWC
Trigger: GCACCAGATCTGCATCCACAAACGTGAGCTGACAGA...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGTCTGTCAGCTCACGTTaGTGGATGCAGATCTGGTGC +
Preference number: 5 (lower is better)
Translates to: QANRTGASSTHRPVMCKKSVSSR*WMQIWC
Trigger: GCACCAGATCTGCATCCACAAACGTGAGCTGACAGA...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGAGAGGCAGGAGGGATTaGTTAACCAGTGCCACCATG +
Preference number: 5 (lower is better)
Translates to: QANRTGASSTHRPVMCKKRGRRD*LTSATM
Trigger: CATGGTGGCACTGGTTAACAAATCCCTCCTGCCTCT...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp GAGCTGGACGCTAGGGTCTTCACCCTAACGCAAAGCAAAAGCCGAACGGAACGGAGCTCAAAGTTGTACTaGAGACCACGGGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: ELDARVFTLTQSKSRTERSSKLY*RPRVKK
Trigger: CTTCTTCACCCGTGGTCTCAAGTACAACTTTGAGCT...CCGTTCCGTTCGGCTTTTGCTTTGCGTTAGGGTGAAGACCCTAGCGTCCAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CAAGCGAACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGGAACCCTGCTCAGCCTaGTCTATACCTTGTGCACCT +
Preference number: 5 (lower is better)
Translates to: QANRTGASSTHRPVMCKKEPCSA*SIPCAP
Trigger: AGGTGCACAAGGTATAGACAAGGCTGAGCAGGGTTC...CTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTTCGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS CCA 90 bp TTCCTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTaGCAGAGTGACCTTGACGGGTTCAGTAGGGTGAAGACTGTGGTT +
Preference number: 5 (lower is better)
Translates to: FLNPGTTDLSRQKGV*QSDLDGFSRVKTVV
Trigger: AACCACAGTCTTCACCCTACTGAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
ENST00000412355.5
ENST00000428226.5
ENST00000431715.5
ENST00000432520.5
ENST00000436856.5
ENST00000439812.5
ENST00000456708.5
ENST00000457841.5
CDS-3UTR CAA 90 bp GGACTGGATAGACGTAAAGAGGGCATTTTCAGGGAGCAGACCCCCTTGGGCGAGCTGTGGTTCACCATCTaGTTGGCAAATAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: GLDRRKEGIFREQTPLGELWFTI*LANRMS
Trigger: TGACATCCTATTTGCCAACAAGATGGTGAACCACAG...CTCGCCCAAGGGGGTCTGCTCCCTGAAAATGCCCTCTTTACGTCTATCCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000409033.7
CDS-3UTR CAA 90 bp AACAGAACAGGAGCAAGCAGCACACACAGGCCAGTGATGTGCAAGAAGCGGAGACGTTTGTACTCGGCCTaGAGGCTCCATTCATTGAGA +
Preference number: 5 (lower is better)
Translates to: NRTGASSTHRPVMCKKRRRLYSA*RLHSLR
Trigger: TCTCAATGAATGGAGCCTCAAGGCCGAGTACAAACG...TCTCCGCTTCTTGCACATCACTGGCCTGTGTGTGCTGCTTGCTCCTGTTCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS TCA 90 bp TCTATTACCCACCTGCTAGCAGAACTCAAGGCTATGGTGTCCTCTTaGCTTGCAGCCCTTACCTGGCACTACAGACTTGAGCAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: SITHLLAELKAMVSS*LAALTWHYRLEQAK
Trigger: TTTTGCCTGCTCAAGTCTGTAGTGCCAGGTAAGGGCTGCAAGTCAAGAGGACACCATAGCCTTGAGTTCTGCTAGCAGGTGGGTAATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466217.5
CDS-3UTR CAA 90 bp AACGCAAAGCAAAAGCCGAACGGAACGGGAGCAAGCGAACAGAACAGGAGCAAGCTGTGGTTCACCATCTaGTTGGCAAATAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: NAKQKPNGTGASEQNRSKLWFTI*LANRMS
Trigger: TGACATCCTATTTGCCAACAAGATGGTGAACCACAG...CTTGCTCCTGTTCTGTTCGCTTGCTCCCGTTCCGTTCGGCTTTTGCTTTGCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp CTGAATCCTGGCACTACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTGTGGTTCACCATCTaGTTGGCAAATAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: LNPGTTDLSRQKGVWQSDLWFTI*LANRMS
Trigger: TGACATCCTATTTGCCAACAAGATGGTGAACCACAG...GTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGATTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR CAA 90 bp ACAGACTTGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGTTCAGTCTGTGGTTCACCATCTaGTTGGCAAATAGGATGTCA +
Preference number: 5 (lower is better)
Translates to: TDLSRQKGVWQSDLDGFSLWFTI*LANRMS
Trigger: TGACATCCTATTTGCCAACAAGATGGTGAACCACAG...ACTGAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000412355.5
ENST00000456708.5
CDS-3UTR CAA 90 bp GGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTTCCGGGCCTGCACTTCTaGCCACGTGCAATACGGAAG +
Preference number: 5 (lower is better)
Translates to: GKGSKVFPSCSYNLETFFPGLHF*PRAIRK
Trigger: CTTCCGTATTGCACGTGGCAAGAAGTGCAGGCCCGG...AAAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp TTATTAAGGGTTATCAAGCTGTACACGGTCCCTACCCTGCTCCGCTCCGAGTTCAGCTCAAAGTTGTACTaGAGACCACGGGTGAAGAAG +
Preference number: 5 (lower is better)
Translates to: LLRVIKLYTVPTLLRSEFSSKLY*RPRVKK
Trigger: CTTCTTCACCCGTGGTCTCAAGTACAACTTTGAGCT...GAACTCGGAGCGGAGCAGGGTAGGGACCGTGTACAGCTTGATAACCCTTAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTGTGTTGGCACCTCCCTaGGCCAGGCACAGACACACA +
Preference number: 5 (lower is better)
Translates to: WQGQQSISILLLQFRNLLVLAPP*ARHRHT
Trigger: TGTGTGTCTGTGCCTGGCCAAGGGAGGTGCCAACAC...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS-3UTR CAA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTCTCCCCACTCCACAGTaGGCACAGGTTCTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: WQGQQSISILLLQFRNLLLPTPQ*AQVLPA
Trigger: AGCAGGGAGAACCTGTGCCAACTGTGGAGTGGGGAG...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS GCA 90 bp AACTCGAGAGAAGAAGAGGTCAAGGTTTTCAATATGGTGCCAAGGTaGTGTGGGATAGGAACAGAGATGTCAGAGCCCTGGGAGAACACA +
Preference number: 5 (lower is better)
Translates to: NSREEEVKVFNMVPR*CGIGTEMSEPWENT
Trigger: TGTGTTCTCCCAGGGCTCTGACATCTCTGTTCCTATCCCACAGCACCTTGGCACCATATTGAAAACCTTGACCTCTTCTTCTCTCGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486766.2
CDS-3UTR CAA 90 bp TGGCAAGGGCAGCAAAGTATTTCCATCCTGCTCCTACAATTTAGAAACCTTCTTCCTGGCACTACAGACTaGAGCAGGCAAAAAGGCGTC +
Preference number: 5 (lower is better)
Translates to: WQGQQSISILLLQFRNLLPGTTD*SRQKGV
Trigger: GACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGG...AAGAAGGTTTCTAAATTGTAGGAGCAGGATGGAAATACTTTGCTGCCCTTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409618.5
CDS CCA 72 bp CCTCGCCCCAGGGTCGCCCGGCCCCAGGCCAAGGGCTaGCAGCTCCCAACAGCGGACAACCTCGCGCGCGGC +
Preference number: 6 (lower is better)
Translates to: PRPRVARPQAKG*QLPTADNLARG
Trigger: GCCGCGCGCGAGGTTGTCCGCTGTTGGGAGCTGCCAGCCCTTGGCCTGGGGCCGGGCGACCCTGGGGCGAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409618.5
CDS GCA 72 bp CGGCTCGGCGCGACCCGCGGCGCTAGGCCGGGTGTCTaGCACTCACTGTCACCCGCAGCCAGGCTGGCCAAT +
Preference number: 6 (lower is better)
Translates to: RLGATRGARPGV*HSLSPAARLAN
Trigger: ATTGGCCAGCCTGGCTGCGGGTGACAGTGAGTGGCAGACACCCGGCCTAGCGCCGCGGGTCGCGCCGAGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396761.6
CDS CCA 72 bp TGCCCCTCAGGGAAGTCACCACTCACAGGGTCAGTGTaGACCAGGGCCCGTGGAGCCCCGGCCGGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: CPSGKSPLTGSV*TRARGAPAGWA
Trigger: GGCCCAGCCGGCCGGGGCTCCACGGGCCCTGGTCCACACTGACCCTGTGAGTGGTGACTTCCCTGAGGGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000409618.5
ENST00000432520.5
ENST00000436856.5
ENST00000443140.5
ENST00000488833.1
CDS TCA 72 bp CTGGGCTCAGGGGTTCCTCAGGAACAGCGACCCGGGTaGTTCCAGAGGCTCCGCCGGCTCCGCTCGGCTCGG +
Preference number: 6 (lower is better)
Translates to: LGSGVPQEQRPG*FQRLRRLRSAR
Trigger: CCGAGCCGAGCGGAGCCGGCGGAGCCTCTGGAATCACCCGGGTCGCTGTTCCTGAGGAACCCCTGAGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436856.5
CDS CCA 72 bp AGCCAGAGCCTGTCATGGTGCTGTGAGCCCGGCCTGTaGGCGCCTGCCCGGGTTGCAGCGGGGAGAAGGAGC +
Preference number: 6 (lower is better)
Translates to: SQSLSWCCEPGL*APARVAAGRRS
Trigger: GCTCCTTCTCCCCGCTGCAACCCGGGCAGGCGCCCACAGGCCGGGCTCACAGCACCATGACAGGCTCTGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429920.1
CDS TCA 72 bp CGATGCTCTGCAGCTGCTCAGGAACAGCGACCCGGGTaGTTCCAGAGGCTCCGCCGGCTCCGCTCGGCTCGG +
Preference number: 6 (lower is better)
Translates to: RCSAAAQEQRPG*FQRLRRLRSAR
Trigger: CCGAGCCGAGCGGAGCCGGCGGAGCCTCTGGAATCACCCGGGTCGCTGTTCCTGAGCAGCTGCAGAGCATCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361242.9
ENST00000409033.7
ENST00000428226.5
ENST00000439812.5
ENST00000455079.5
ENST00000466217.5
CDS TCA 72 bp CCTCGATGCTCTGCAGCTCAGGAACAGCGACCCGGGTaGTTCCAGAGGCTCCGCCGGCTCCGCTCGGCTCGG +
Preference number: 6 (lower is better)
Translates to: PRCSAAQEQRPG*FQRLRRLRSAR
Trigger: CCGAGCCGAGCGGAGCCGGCGGAGCCTCTGGAATCACCCGGGTCGCTGTTCCTGAGCTGCAGAGCATCGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456708.5
ENST00000457841.5
CDS CAA 90 bp TGTTGCAGGGATCGAGTCAGCCTTACAGCTGATAGCCCGGGTGGGTaGGCTTGCCTCCCCACACCCAGCCGCGGCGACCGTGGACCGGAG +
Preference number: 6 (lower is better)
Translates to: CCRDRVSLTADSPGG*ACLPTPSRGDRGPE
Trigger: CTCCGGTCCACGGTCGCCGCGGCTGGGTGTGGGGAGGCAAGCCAACCCACCCGGGCTATCAGCTGTAAGGCTGACTCGATCCCTGCAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000409618.5
ENST00000432520.5
ENST00000443140.5
ENST00000488833.1
CDS TCA 72 bp ATATGGTGCCAAGGTGCTCAGGAACAGCGACCCGGGTaGTTCCAGAGGCTCCGCCGGCTCCGCTCGGCTCGG +
Preference number: 6 (lower is better)
Translates to: IWCQGAQEQRPG*FQRLRRLRSAR
Trigger: CCGAGCCGAGCGGAGCCGGCGGAGCCTCTGGAATCACCCGGGTCGCTGTTCCTGAGCACCTTGGCACCATAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409422.5
CDS TCA 72 bp CACAAAGAGGAACTGCCTCAGGAACAGCGACCCGGGTaGTTCCAGAGGCTCCGCCGGCTCCGCTCGGCTCGG +
Preference number: 6 (lower is better)
Translates to: HKEELPQEQRPG*FQRLRRLRSAR
Trigger: CCGAGCCGAGCGGAGCCGGCGGAGCCTCTGGAATCACCCGGGTCGCTGTTCCTGAGGCAGTTCCTCTTTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431715.5
CDS GCA 72 bp ACAGCACCAGGCTCTGCAGCTGTCCTTCCCACACGCTaGTCCCGGAGCTGGCTGTCCTGGCATCCACCCTGT +
Preference number: 6 (lower is better)
Translates to: TAPGSAAVLPTR*SRSWLSWHPPC
Trigger: ACAGGGTGGATGCCAGGACAGCCAGCTCCGGGAGCAGCGTGTGGGAAGGACAGCTGCAGAGCCTGGTGCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475339.1
CDS GCA 72 bp ATGCGGTTGCTGAGGCGCTGGGCCAGCTCTAGCCGTTaGCCCCCACGTTTGTACTCGGCCTTGAGGCTCCAT +
Preference number: 6 (lower is better)
Translates to: MRLLRRWASSSR*PPRLYSALRLH
Trigger: ATGGAGCCTCAAGGCCGAGTACAAACGTGGGGGGCAACGGCTAGAGCTGGCCCAGCGCCTCAGCAACCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
CDS GCA 72 bp TTGTACTGGAAGAGCTGGGCAAACTCGTCCCGGGTCTaGGAGCGGTGGGCATTACCCTGCCAGTGGTCAGGC +
Preference number: 6 (lower is better)
Translates to: LYWKSWANSSRV*ERWALPCQWSG
Trigger: GCCTGACCACTGGCAGGGTAATGCCCACCGCTCGCAGACCCGGGACGAGTTTGCCCAGCTCTTCCAGTACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409422.5
ENST00000409618.5
ENST00000429920.1
CDS CCA 72 bp ACGCGGAGCAGCTGCTCAGGGCAGAACACCATGTGCTaGTCCGGGATAAAGGACCTGCACACGGTCACGGTG +
Preference number: 6 (lower is better)
Translates to: TRSSCSGQNTMC*SGIKDLHTVTV
Trigger: CACCGTGACCGTGTGCAGGTCCTTTATCCCGGACCAGCACATGGTGTTCTGCCCTGAGCAGCTGCTCCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
CDS CAA 72 bp AGCAGGAAGTTAGCGATGCCAATCCACAGGATGCGGTaGCTGAGGCGCTGGGCCAGCTCTAGCCGTTGCCCC +
Preference number: 6 (lower is better)
Translates to: SRKLAMPIHRMR*LRRWASSSRCP
Trigger: GGGGCAACGGCTAGAGCTGGCCCAGCGCCTCAGCAACCGCATCCTGTGGATTGGCATCGCTAACTTCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
CDS GCA 72 bp ATCACGCGGAGCAGCTGCTCAGGGCAGAACACCATGTaGTGGTCCGGGATAAAGGACCTGCACACGGTCACG +
Preference number: 6 (lower is better)
Translates to: ITRSSCSGQNTM*WSGIKDLHTVT
Trigger: CGTGACCGTGTGCAGGTCCTTTATCCCGGACCAGCACATGGTGTTCTGCCCTGAGCAGCTGCTCCGCGTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
CDS GCA 72 bp CTGTCCACCTTGACCACCAGCTCCATGGACAGTATGTaGTCCTCTCCAGCCCTCGATGCTCTGCAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: LSTLTTSSMDSM*SSPALDALQLL
Trigger: GAGCAGCTGCAGAGCATCGAGGGCTGGAGAGGAGCACATACTGTCCATGGAGCTGGTGGTCAAGGTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361242.9
ENST00000409033.7
ENST00000455079.5
ENST00000466217.5
CDS GCA 72 bp CTGTCCACCTTGACCACCAGCTCCATGGACAGTATGTaGTCCTCTCCAGCCCTCGATGCTCTGCAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LSTLTTSSMDSM*SSPALDALQLL
Trigger: CAGCAGCTGCAGAGCATCGAGGGCTGGAGAGGAGCACATACTGTCCATGGAGCTGGTGGTCAAGGTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000409618.5
ENST00000434939.1
ENST00000436856.5
CDS GCA 72 bp CTGTCCACCTTGACCACCAGCTCCATGGACAGTATGTaGTCCTCTCCAGCCCTCGATGCTCTGCAGCTGTCC +
Preference number: 6 (lower is better)
Translates to: LSTLTTSSMDSM*SSPALDALQLS
Trigger: GGACAGCTGCAGAGCATCGAGGGCTGGAGAGGAGCACATACTGTCCATGGAGCTGGTGGTCAAGGTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443140.5
CDS GCA 72 bp TGGACAGTATGTGCTCCTCTCCAGCCCTCGATGCTCTaGAGCTGCTGGAGGAGAAGATGTCAGGCCCCAGAG +
Preference number: 6 (lower is better)
Translates to: WTVCAPLQPSML*SCWRRRCQAPE
Trigger: CTCTGGGGCCTGACATCTTCTCCTCCAGCAGCTGCAGAGCATCGAGGGCTGGAGAGGAGCACATACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434939.1
CDS GCA 72 bp CTGTCCACCTTGACCACCAGCTCCATGGACAGTATGTaGTCCTCTCCAGCCCTCGATGCTCTGCAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: LSTLTTSSMDSM*SSPALDALQLR
Trigger: CCTGAGCTGCAGAGCATCGAGGGCTGGAGAGGAGCACATACTGTCCATGGAGCTGGTGGTCAAGGTGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000456708.5
ENST00000457841.5
CDS CCA 72 bp CCTGTCCACCTTGACCACATGGCCCTACCAGCTCCATaGACAGTATGTGCTCCTCTCCAGCCCTCGATGCTC +
Preference number: 6 (lower is better)
Translates to: PVHLDHMALPAP*TVCAPLQPSML
Trigger: GAGCATCGAGGGCTGGAGAGGAGCACATACTGTCCATGGAGCTGGTAGGGCCATGTGGTCAAGGTGGACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439812.5
CDS CAA 90 bp CTTCCATCAACTCTCCCTATGGCTGTCATATCCAAGAACTCACACTaGCTCCCCTCGGCGACGTGCACCAACAGGTCCTCCTCCCCTGGG +
Preference number: 6 (lower is better)
Translates to: LPSTLPMAVISKNSH*LPSATCTNRSSSPG
Trigger: CCCAGGGGAGGAGGACCTGTTGGTGCACGTCGCCGAGGGGAGCAAGTGTGAGTTCTTGGATATGACAGCCATAGGGAGAGTTGATGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486766.2
CDS GCA 72 bp CGTTTGTGGATGCAGATCTGGTGCTCCTTCTGCGTCTaGACGATCCGGGCCTGCACTTCTTGCCACGTGCAA +
Preference number: 6 (lower is better)
Translates to: RLWMQIWCSFCV*TIRACTSCHVQ
Trigger: TTGCACGTGGCAAGAAGTGCAGGCCCGGATCGTGCAGACGCAGAAGGAGCACCAGATCTGCATCCACAAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
ENST00000431715.5
CDS CCA 72 bp TCCAGTTCTGTCAGCTCACGTTTGTGGATGCAGATCTaGTGCTCCTTCTGCGTCTGCACGATCCGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: SSSVSSRLWMQI*CSFCVCTIRAC
Trigger: GCAGGCCCGGATCGTGCAGACGCAGAAGGAGCACCAGATCTGCATCCACAAACGTGAGCTGACAGAACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
ENST00000431715.5
CDS CAA 72 bp CTCCTTCTGCGTCTGCACGATCCGGGCCTGCACTTCTaGCCACGTGCAATACGGAAGGGCAGACATAGGGAT +
Preference number: 6 (lower is better)
Translates to: LLLRLHDPGLHF*PRAIRKGRHRD
Trigger: ATCCCTATGTCTGCCCTTCCGTATTGCACGTGGCAAGAAGTGCAGGCCCGGATCGTGCAGACGCAGAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
ENST00000431715.5
CDS GCA 72 bp AGTTCTGTCAGCTCACGTTTGTGGATGCAGATCTGGTaGTCCTTCTGCGTCTGCACGATCCGGGCCTGCACT +
Preference number: 6 (lower is better)
Translates to: SSVSSRLWMQIW*SFCVCTIRACT
Trigger: AGTGCAGGCCCGGATCGTGCAGACGCAGAAGGAGCACCAGATCTGCATCCACAAACGTGAGCTGACAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
ENST00000431715.5
CDS GCA 72 bp GCGGAAGCGCAGAGGCAGGAGGGATTTGTTAACCAGTaGCACCATGTAGTTCTGGAAACGGAGGATGCGGTG +
Preference number: 6 (lower is better)
Translates to: AEAQRQEGFVNQ*HHVVLETEDAV
Trigger: CACCGCATCCTCCGTTTCCAGAACTACATGGTGGCACTGGTTAACAAATCCCTCCTGCCTCTGCGCTTCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
CDS GCA 72 bp AATATGGTGCCAAGGTGCAGCTCCATGGACAGTATGTaGTCCTCTCCAGCCCTCGATGCTCTGCAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: NMVPRCSSMDSM*SSPALDALQLL
Trigger: CAGCAGCTGCAGAGCATCGAGGGCTGGAGAGGAGCACATACTGTCCATGGAGCTGCACCTTGGCACCATATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488833.1
CDS GCA 72 bp CTCTCCCTATGGCTGTCATATCCAAGAACTCACACTTaGTCCCCTCGGCGACGTGCACCAACAGGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: LSLWLSYPRTHT*SPRRRAPTGPP
Trigger: AGGAGGACCTGTTGGTGCACGTCGCCGAGGGGAGCAAGTGTGAGTTCTTGGATATGACAGCCATAGGGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486766.2
CDS CCA 72 bp TCTTCCAAAATGAACACTGCCTTGTACTGGAAGAGCTaGGCAAACTCGTCCCGGGTCTGCGAGCGGTGGGCA +
Preference number: 6 (lower is better)
Translates to: SSKMNTALYWKS*ANSSRVCERWA
Trigger: TGCCCACCGCTCGCAGACCCGGGACGAGTTTGCCCAGCTCTTCCAGTACAAGGCAGTGTTCATTTTGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409422.5
ENST00000409618.5
ENST00000429920.1
CDS CAA 72 bp ACTCTCCCTATGGCTGTCATATCCAAGAACTCACACTaGCTCCCCTCGGCGACGTGCACCAACAGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: TLPMAVISKNSH*LPSATCTNRSS
Trigger: GGAGGACCTGTTGGTGCACGTCGCCGAGGGGAGCAAGTGTGAGTTCTTGGATATGACAGCCATAGGGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486766.2
CDS GCA 72 bp CGTGGTGGCTGCCAGCCAGGGTTGGTGATGGCAAAGTaGATGAGTGACAACTCTGTCTTTCCATCCTCAGCT +
Preference number: 6 (lower is better)
Translates to: RGGCQPGLVMAK*MSDNSVFPSSA
Trigger: AGCTGAGGATGGAAAGACAGAGTTGTCACTCATGCACTTTGCCATCACCAACCCTGGCTGGCAGCCACCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
ENST00000429920.1
CDS CAA 72 bp CCAGGTCCCCAGAAGAGGATCAGCTCAAAGTTGTACTaGAGACCACGGGTGAAGAAGACAGCTTCCCCGAGG +
Preference number: 6 (lower is better)
Translates to: PGPQKRISSKLY*RPRVKKTASPR
Trigger: CCTCGGGGAAGCTGTCTTCTTCACCCGTGGTCTCAAGTACAACTTTGAGCTGATCCTCTTCTGGGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
CDS CAA 90 bp CTATGGTGTCCTCTTGACTTGCAGCCCTTACCTGGCACTACAGACTaGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTGACGGGTTC +
Preference number: 6 (lower is better)
Translates to: LWCPLDLQPLPGTTD*SRQKGVWQSDLDGF
Trigger: GAACCCGTCAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGTAAGGGCTGCAAGTCAAGAGGACACCATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466217.5
CDS TCA 72 bp CTCTTGACTTGCAGCCCTTACCTGGCACTACAGACTTaGGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTTG +
Preference number: 6 (lower is better)
Translates to: LLTCSPYLALQT*AGKKASGRVTL
Trigger: CAAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGTAAGGGCTGCAAGTCAAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466217.5
CDS CAA 72 bp CCTCTTGACTTGCAGCCCTTACCTGGCACTACAGACTaGAGCAGGCAAAAAGGCGTCTGGCAGAGTGACCTT +
Preference number: 6 (lower is better)
Translates to: PLDLQPLPGTTD*SRQKGVWQSDL
Trigger: AAGGTCACTCTGCCAGACGCCTTTTTGCCTGCTCAAGTCTGTAGTGCCAGGTAAGGGCTGCAAGTCAAGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466217.5
CDS TCA 72 bp GCGTCTGGCAGAGTGACCTTGACGGGTTCAGTAGGGTaGAGACTGTGGTTCACCATCTTGTTGGCAAATAGG +
Preference number: 6 (lower is better)
Translates to: ASGRVTLTGSVG*RLWFTILLANR
Trigger: CCTATTTGCCAACAAGATGGTGAACCACAGTCTTCACCCTACTGAACCCGTCAAGGTCACTCTGCCAGACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
ENST00000412355.5
ENST00000428226.5
ENST00000431715.5
ENST00000432520.5
ENST00000436856.5
ENST00000439812.5
ENST00000455079.5
ENST00000456708.5
ENST00000457841.5
ENST00000466217.5
ENST00000486766.2
CDS TCA 72 bp CTGCCAGCCAGGGTTGGTGATGGCAAAGTGCATGAGTaGCAACTCTGTCTTTCCATCCTCAGCTTGCTGGTA +
Preference number: 6 (lower is better)
Translates to: LPARVGDGKVHE*QLCLSILSLLV
Trigger: TACCAGCAAGCTGAGGATGGAAAGACAGAGTTGTCACTCATGCACTTTGCCATCACCAACCCTGGCTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
ENST00000429920.1
CDS TCA 72 bp CACCTGCTAGCAGAACTCAAGGCTATGGTGTCCTCTTaGCTTGCAGCCCTTACCTGGCACTACAGACTTGAG +
Preference number: 6 (lower is better)
Translates to: HLLAELKAMVSS*LAALTWHYRLE
Trigger: CTCAAGTCTGTAGTGCCAGGTAAGGGCTGCAAGTCAAGAGGACACCATAGCCTTGAGTTCTGCTAGCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466217.5
CDS CCA 72 bp CAGCCAGGATGGAGCCAGCGAAGAAGGCTCCATTCTTaGCCAGCAGTGTCAAAAGAGGTGACAAGAAGCAAT +
Preference number: 6 (lower is better)
Translates to: QPGWSQRRRLHS*PAVSKEVTRSN
Trigger: ATTGCTTCTTGTCACCTCTTTTGACACTGCTGGCCAAGAATGGAGCCTTCTTCGCTGGCTCCATCCTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
CDS CAA 72 bp AGAGAGCCAGGTCCCCAGAAGAGGATCAGCTCAAAGTaGTACTTGAGACCACGGGTGAAGAAGACAGCTTCC +
Preference number: 6 (lower is better)
Translates to: REPGPQKRISSK*YLRPRVKKTAS
Trigger: GGAAGCTGTCTTCTTCACCCGTGGTCTCAAGTACAACTTTGAGCTGATCCTCTTCTGGGGACCTGGCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361242.9
ENST00000396761.6
ENST00000409033.7
ENST00000409422.5
ENST00000409618.5
CDS GCA 72 bp GAAGAAGAGGTCAAGGTTTTCAATATGGTGCCAAGGTaGTGTGGGATAGGAACAGAGATGTCAGAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: EEEVKVFNMVPR*CGIGTEMSEPW
Trigger: CCAGGGCTCTGACATCTCTGTTCCTATCCCACAGCACCTTGGCACCATATTGAAAACCTTGACCTCTTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486766.2