Pregenerated sensors for ATG3 (Homo sapiens)
Ensembl gene IDs: ENSG00000144848Ensembl transcript IDs: ENST00000283290.10, ENST00000402314.6, ENST00000465980.1, ENST00000488910.1, ENST00000492886.5, ENST00000494571.1, ENST00000495756.5, ENST00000496423.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAACCAATTACTATTATGAATTATATATAGACAGTCTTCCAAGTTaGTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGG | + |
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Preference number: 1 (lower is better) Translates to: ETNYYYELYIDSLPS*YLASSRDVPVRHNR Trigger: CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAGACTGTCTATATATAATTCATAATAGTAATTGGTTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| 3UTR CCA 90 bp | GATGTGCCAGTTAGGCATAATAGGACTTCAGGAGTAAATATGGTTTaGACTGGAAGTTTTTGGTTTGTTTCAATATCAAATCAGTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: DVPVRHNRTSGVNMV*TGSFWFVSISNQFK Trigger: TTTGAACTGATTTGATATTGAAACAAACCAAAAACTTCCAGTCCAAACCATATTTACTCCTGAAGTCCTATTATGCCTAACTGGCACATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| 3UTR-3UTR GCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAACAAGGGTGAGCTACTaGTACACATGGGGACATGTT | + |
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Preference number: 2 (lower is better) Translates to: SCYLASSRDVPVRHNRTSTRVSY*YTWGHV Trigger: AACATGTCCCCATGTGTAGCAGTAGCTCACCCTTGT...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| 3UTR-3UTR CCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAAGCTACTGCTACACATaGGGACATGTTCTAATCAAC | + |
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Preference number: 2 (lower is better) Translates to: SCYLASSRDVPVRHNRTSSYCYT*GHVLIN Trigger: GTTGATTAGAACATGTCCCCATGTGTAGCAGTAGCT...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| 3UTR-3UTR TCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAAGAGACACCTCAGATTaGCACAACCTAATTTTACTT | + |
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Preference number: 2 (lower is better) Translates to: SCYLASSRDVPVRHNRTSRDTSD*HNLILL Trigger: AAGTAAAATTAGGTTGTGTCAATCTGAGGTGTCTCT...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| 3UTR-3UTR CCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGGGAGTAAATATGGTTTaGACTGGAAGTTTTTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: LPSCYLASSRDVPVRHNRGVNMV*TGSFWF Trigger: AAACCAAAAACTTCCAGTCCAAACCATATTTACTCC...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| 3UTR-3UTR CAA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGCAGAGACACCTCAGATaGACACAACCTAATTTTACT | + |
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Preference number: 3 (lower is better) Translates to: LPSCYLASSRDVPVRHNRQRHLR*TQPNFT Trigger: AGTAAAATTAGGTTGTGTCAATCTGAGGTGTCTCTG...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| 3UTR-3UTR CAA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGGATCCAACAGTTTGCTaGGGCATTAACTTGAATGTA | + |
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Preference number: 3 (lower is better) Translates to: LPSCYLASSRDVPVRHNRDPTVC*GINLNV Trigger: TACATTCAAGTTAATGCCCAAGCAAACTGTTGGATC...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| 3UTR GCA 72 bp | TTCCAACAATCCACTCTCTTCATATTCTTCCATATCTaGAGCTTCTCCTTCATCTTCATCTTCTTCCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: FQQSTLFIFFHI*SFSFIFIFFLF Trigger: GAAGAGGAAGAAGATGAAGATGAAGGAGAAGCTGCAGATATGGAAGAATATGAAGAGAGTGGATTGTTGGAA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| 3UTR TCA 72 bp | TCATCTTCTTCCTCTTCACATAGTGCTGAGCAATCTTaGAGCCTTATATTGTCCTTATTTTCCAGTGTGATC | + |
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Preference number: 3 (lower is better) Translates to: SSSSSSHSAEQS*SLILSLFSSVI Trigger: GATCACACTGGAAAATAAGGACAATATAAGGCTTCAAGATTGCTCAGCACTATGTGAAGAGGAAGAAGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| 3UTR GCA 72 bp | TACTATTATGAATTATATATAGACAGTCTTCCAAGTTaGTACCTAGCATCCAGCAGAGATGTGCCAGTTAGG | + |
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Preference number: 3 (lower is better) Translates to: YYYELYIDSLPS*YLASSRDVPVR Trigger: CCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAGACTGTCTATATATAATTCATAATAGTA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| 3UTR TCA 72 bp | AAGAATTCAACTATGCAAATTTGTGTCTATTTAACATaGGGCTCTTTAAGACTACCTGACCACTCATTCGAT | + |
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Preference number: 3 (lower is better) Translates to: KNSTMQICVYLT*GSLRLPDHSFD Trigger: ATCGAATGAGTGGTCAGGTAGTCTTAAAGAGCCTCATGTTAAATAGACACAAATTTGCATAGTTGAATTCTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGCGCGCGAAGACGGGGTaGGCGATCCTCGCACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRRAKTG*AILAPQ Trigger: CTGGGGTGCGAGGATCGCGCACCCCGTCTTCGCGCG...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGGCATCAGCACCCGGCTaGCAGCACCCGAGGGGACGG | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRASAPG*QHPRGR Trigger: CCGTCCCCTCGGGTGCTGCCAGCCGGGTGCTGATGC...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGGCACCCCTCGCCCTCTaGGAGCTGTCTGTCCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRAPLAL*ELSVLA Trigger: AGCGAGGACAGACAGCTCGCAGAGGGCGAGGGGTGC...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGGGCCCCGCGACGGGATaGAAAGTGCAGCCGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRGPATG*KVQPCQ Trigger: CTGACACGGCTGCACTTTCCATCCCGTCGCGGGGCC...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR TCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAGGCCGAAGGGAGACCTaGGGTGAGAAGCGGACGCAC | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSGRRET*GEKRTH Trigger: GTGCGTCCGCTTCTCACCTCAGGTCTCCCTTCGGCC...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGCGACGGGATGGAAAGTaGAGCCGTGTCAGGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRRRDGK*SRVRGQ Trigger: CTGGCCCCTGACACGGCTGCACTTTCCATCCCGTCG...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCATCACATTCTGCATCCTaGGGCCGGAGTAGCGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSSHSAS*GRSSGR Trigger: CCGGCCGCTACTCCGGCCCCAGGATGCAGAATGTGA...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR TCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAAAGGGAGACCTGAGGTaGGAAGCGGACGCACACGCA | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSKGDLR*EADAHA Trigger: TGCGTGTGCGTCCGCTTCTCACCTCAGGTCTCCCTT...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGTGTCTGTCCTCGCTTTaGTTCACTCGCGCCCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRCLSSL*FTRAPS Trigger: GGAAGGGGCGCGAGTGAAGCAAAGCGAGGACAGACA...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR TCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGCAGTGGTGGACTAGGTaGTCTCCAGCTGCCACAAAC | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRQWWTR*SPAATN Trigger: GTTTGTGGCAGCTGGAGATCACCTAGTCCACCACTG...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGAGAAAATGTCCTCGCTaGCACCGACTCGCATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRRKCPR*HRLASA Trigger: TGCTGATGCGAGTCGGTGGCAGCGAGGACATTTTCT...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCATCCCCTGTAGCCCATTaGCATGTTGGACAGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSSPVAH*HVGQWW Trigger: CCACCACTGTCCAACATGGCAATGGGCTACAGGGGA...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CCA 90 bp | ATTTTCCAGTGTGATCTCTTTAACGGCTTCCGTTATTCCTGTAATACCTGTGTTGGCCCCGCGACGGGATaGAAAGTGCAGCCGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: IFQCDLFNGFRYSCNTCVGPATG*KVQPCQ Trigger: CTGACACGGCTGCACTTTCCATCCCGTCGCGGGGCC...AACACAGGTATTACAGGAATAACGGAAGCCGTTAAAGAGATCACACTGGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| CDS-3UTR CCA 90 bp | CAGTGTGATCTCTTTAACGGCTTCCGTTATTCCTGTAATACCTGTGTTGTGATATCACATTCTGCATCCTaGGGCCGGAGTAGCGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: QCDLFNGFRYSCNTCVVISHSAS*GRSSGR Trigger: CCGGCCGCTACTCCGGCCCCAGGATGCAGAATGTGA...TATCACAACACAGGTATTACAGGAATAACGGAAGCCGTTAAAGAGATCACACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| CDS-3UTR GCA 90 bp | ATTTTCCAGTGTGATCTCTTTAACGGCTTCCGTTATTCCTGTAATACCTGTGTTCGACGGGATGGAAAGTaGAGCCGTGTCAGGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: IFQCDLFNGFRYSCNTCVRRDGK*SRVRGQ Trigger: CTGGCCCCTGACACGGCTGCACTTTCCATCCCGTCG...AACACAGGTATTACAGGAATAACGGAAGCCGTTAAAGAGATCACACTGGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| CDS-3UTR CCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAGGTGAACTGAACACATaGGAGGTGGTGGCAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSGELNT*EVVADE Trigger: CTCATCTGCCACCACCTCCCATGTGTTCAGTTCACC...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGCTCAGCCACTTCCAGTaGCTTTCCCTTCACAGTATT | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRLSHFQ*LSLHSI Trigger: AATACTGTGAAGGGAAAGGCACTGGAAGTGGCTGAG...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCATCACCTCAGCATGCCTaGATGGGTGAACTGAACACA | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSSPQHA*MGELNT Trigger: TGTGTTCAGTTCACCCATGCAGGCATGCTGAGGTGA...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAACACATGGGAGGTGGTaGCAGATGAGGGTGATTTTC | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSTHGRW*QMRVIF Trigger: GAAAATCACCCTCATCTGCCACCACCTCCCATGTGT...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR TCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAAGGGAAGGATACATATaGACTCCAAGTTCTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSREGYI*TPSSPP Trigger: AGGGGGAGAACTTGGAGTTCATATGTATCCTTCCCT...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | CAGTGTGATCTCTTTAACGGCTTCCGTTATTCCTGTAATACCTGTGTTGTGATATCCCCTGTAGCCCATTaGCATGTTGGACAGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QCDLFNGFRYSCNTCVVISPVAH*HVGQWW Trigger: CCACCACTGTCCAACATGGCAATGGGCTACAGGGGA...TATCACAACACAGGTATTACAGGAATAACGGAAGCCGTTAAAGAGATCACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| CDS-3UTR GCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGCATCCAGCAGAGATGTaGCAGTTAGGCATAATAGGA | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRHPAEM*QLGIIG Trigger: TCCTATTATGCCTAACTGGCACATCTCTGCTGGATG...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAGACAGTCTTCCAAGTTaGTACCTAGCATCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSDSLPS*YLASSR Trigger: TCTGCTGGATGCTAGGTAGCAACTTGGAAGACTGTC...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR TCA 90 bp | TGTGATCTCTTTAACGGCTTCCGTTATTCCTGTAATACCTGTGTTGTGATATGTCAGTGGTGGACTAGGTaGTCTCCAGCTGCCACAAAC | + |
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Preference number: 4 (lower is better) Translates to: CDLFNGFRYSCNTCVVICQWWTR*SPAATN Trigger: GTTTGTGGCAGCTGGAGATCACCTAGTCCACCACTG...ACATATCACAACACAGGTATTACAGGAATAACGGAAGCCGTTAAAGAGATCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| CDS-3UTR TCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGGTAATACCTGTGTTGTaGTATGTATCTACCCATCCG | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRVIPVL*YVSTHP Trigger: CGGATGGGTAGATACATATCACAACACAGGTATTAC...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR TCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGTCACATGATCCTGACTaGTGTCTTCATACATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRSHDPD*CLHTCA Trigger: AGCACATGTATGAAGACATCAGTCAGGATCATGTGA...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR TCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAGTATTTGCCAAAGACTaGGCTCTACTGGACTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSVFAKD*ALLDCL Trigger: AAGACAGTCCAGTAGAGCTCAGTCTTTGGCAAATAC...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGAGCTACTGCTACACATaGGGACATGTTCTAATCAAC | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRSYCYT*GHVLIN Trigger: GTTGATTAGAACATGTCCCCATGTGTAGCAGTAGCT...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR TCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGCTCTTTAAGACTACCTaGCCACTCATTCGATTATTG | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRLFKTT*PLIRLL Trigger: CAATAATCGAATGAGTGGTCAGGTAGTCTTAAAGAG...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | ATTTTCCAGTGTGATCTCTTTAACGGCTTCCGTTATTCCTGTAATACCTGTGTTAGAAAATGTCCTCGCTaGCACCGACTCGCATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IFQCDLFNGFRYSCNTCVRKCPR*HRLASA Trigger: TGCTGATGCGAGTCGGTGGCAGCGAGGACATTTTCT...AACACAGGTATTACAGGAATAACGGAAGCCGTTAAAGAGATCACACTGGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| CDS-3UTR GCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAAATATTCCATCTGTTTaGACCGCTTATAGCACGGCA | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSNIPSV*TAYSTA Trigger: TGCCGTGCTATAAGCGGTGCAAACAGATGGAATATT...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCATGCCACAAACTCTTCTaGGGTAATTACACCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSCHKLF*GNYTCF Trigger: GAAACAGGTGTAATTACCCCAGAAGAGTTTGTGGCA...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR TCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAAGTGCTGAGCAATCTTaGAGCCTTATATTGTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSSAEQS*SLILSL Trigger: TAAGGACAATATAAGGCTTCAAGATTGCTCAGCACT...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR TCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGTGTGTCTATTTAACATaGGGCTCTTTAAGACTACCT | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRCVYLT*GSLRLP Trigger: AGGTAGTCTTAAAGAGCCTCATGTTAAATAGACACA...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGATATTCTTCCATATCTaGAGCTTCTCCTTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRIFFHI*SFSFIF Trigger: GAAGATGAAGGAGAAGCTGCAGATATGGAAGAATAT...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAATGTCTTCATACATGTaGTCAACTGTTAAAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSMSSYM*STVKGC Trigger: GCAGCCTTTAACAGTTGAGCACATGTATGAAGACAT...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR TCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCACTCTTCATTACATTGTaGAGTGTCTTGTGTAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSLFITL*SVLCSH Trigger: ATGACTACACAAGACACTTCACAATGTAATGAAGAG...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR GCA 90 bp | TGTGATCTCTTTAACGGCTTCCGTTATTCCTGTAATACCTGTGTTGTGATATGTCTCAGCCACTTCCAGTaGCTTTCCCTTCACAGTATT | + |
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Preference number: 4 (lower is better) Translates to: CDLFNGFRYSCNTCVVICLSHFQ*LSLHSI Trigger: AATACTGTGAAGGGAAAGGCACTGGAAGTGGCTGAG...ACATATCACAACACAGGTATTACAGGAATAACGGAAGCCGTTAAAGAGATCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| CDS-3UTR GCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAGTTAGTGTATGTATTTaGCAAAGACTGAGCTCTACT | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSVSVCI*QRLSST Trigger: AGTAGAGCTCAGTCTTTGGCAAATACATACACTAAC...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CCA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGGAGCTTACTTTTCATTaGGGGAAACCAATTACTATT | + |
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Preference number: 4 (lower is better) Translates to: LPSCYLASSRDVPVRHNRELTFH*GKPITI Trigger: AATAGTAATTGGTTTCCCCCAATGAAAAGTAAGCTC...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CCA 90 bp | CAGTGTGATCTCTTTAACGGCTTCCGTTATTCCTGTAATACCTGTGTTGTGATATGCCACAAACTCTTCTaGGGTAATTACACCTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: QCDLFNGFRYSCNTCVVICHKLF*GNYTCF Trigger: GAAACAGGTGTAATTACCCCAGAAGAGTTTGTGGCA...TATCACAACACAGGTATTACAGGAATAACGGAAGCCGTTAAAGAGATCACACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| CDS-3UTR CCA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAGGAGTAAATATGGTTTaGACTGGAAGTTTTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SCYLASSRDVPVRHNRTSGVNMV*TGSFWF Trigger: AAACCAAAAACTTCCAGTCCAAACCATATTTACTCC...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR TCA 90 bp | CAGTGTGATCTCTTTAACGGCTTCCGTTATTCCTGTAATACCTGTGTTGTGATAAGTGCTGAGCAATCTTaGAGCCTTATATTGTCCTTA | + |
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Preference number: 4 (lower is better) Translates to: QCDLFNGFRYSCNTCVVISAEQS*SLILSL Trigger: TAAGGACAATATAAGGCTTCAAGATTGCTCAGCACT...TATCACAACACAGGTATTACAGGAATAACGGAAGCCGTTAAAGAGATCACACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| CDS-3UTR GCA 90 bp | TGTGATCTCTTTAACGGCTTCCGTTATTCCTGTAATACCTGTGTTGTGATATGTATATTCTTCCATATCTaGAGCTTCTCCTTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: CDLFNGFRYSCNTCVVICIFFHI*SFSFIF Trigger: GAAGATGAAGGAGAAGCTGCAGATATGGAAGAATAT...ACATATCACAACACAGGTATTACAGGAATAACGGAAGCCGTTAAAGAGATCACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| CDS CCA 90 bp | GTCAGAAAATGTCCTCGCTGCCACCGACTCGCATCAGCACCCGGCTaGCAGCACCCGAGGGGACGGGACGCGACGCGACGGGACGGGCGG | + |
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Preference number: 5 (lower is better) Translates to: VRKCPRCHRLASAPG*QHPRGRDATRRDGR Trigger: CCGCCCGTCCCGTCGCGTCGCGTCCCGTCCCCTCGGGTGCTGCCAGCCGGGTGCTGATGCGAGTCGGTGGCAGCGAGGACATTTTCTGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000283290.10 ENST00000402314.6 ENST00000488910.1 ENST00000495756.5 |
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| CDS GCA 90 bp | CGCGCCCCTTCCGGCTTCCCTTCCTTCTCACTCTCTTGCCGTAGCTaGGCCGCCACCGGGGCCTCACGTGACACTAGACTCTCCCGGCAC | + |
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Preference number: 5 (lower is better) Translates to: RAPSGFPSFSLSCRS*AATGASRDTRLSRH Trigger: GTGCCGGGAGAGTCTAGTGTCACGTGAGGCCCCGGTGGCGGCGCAGCTACGGCAAGAGAGTGAGAAGGAAGGGAAGCCGGAAGGGGCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492886.5 |
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| CDS GCA 90 bp | TGCTTCACTCGCGCCCCTTCCGGCTTCCCTTCCTTCTCACTCTCTTaGCGTAGCTGCGCCGCCACCGGGGCCTCACGTGACACTAGACTC | + |
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Preference number: 5 (lower is better) Translates to: CFTRAPSGFPSFSLS*RSCAATGASRDTRL Trigger: GAGTCTAGTGTCACGTGAGGCCCCGGTGGCGGCGCAGCTACGGCAAGAGAGTGAGAAGGAAGGGAAGCCGGAAGGGGCGCGAGTGAAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492886.5 |
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| CDS GCA 90 bp | ACGCACACGCACCCCTCGCCCTCTGCGAGCTGTCTGTCCTCGCTTTaGTTCACTCGCGCCCCTTCCGGCTTCCCTTCCTTCTCACTCTCT | + |
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Preference number: 5 (lower is better) Translates to: THTHPSPSASCLSSL*FTRAPSGFPSFSLS Trigger: AGAGAGTGAGAAGGAAGGGAAGCCGGAAGGGGCGCGAGTGAAGCAAAGCGAGGACAGACAGCTCGCAGAGGGCGAGGGGTGCGTGTGCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000283290.10 ENST00000495756.5 |
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| CDS-3UTR CAA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCACTGTCTGTCCTCGCTTaGCTTCACTCGCGCCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: SCYLASSRDVPVRHNRTSLSVLA*LHSRPF Trigger: GAAGGGGCGCGAGTGAAGCAAAGCGAGGACAGACAG...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CAA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCATTCCCCTGTAGCCCATaGCCATGTTGGACAGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: SCYLASSRDVPVRHNRTSFPCSP*PCWTVV Trigger: CACCACTGTCCAACATGGCAATGGGCTACAGGGGAA...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CAA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAAGACAGTCTTCCAAGTaGCTACCTAGCATCCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: SCYLASSRDVPVRHNRTSRQSSK*LPSIQQ Trigger: CTGCTGGATGCTAGGTAGCAACTTGGAAGACTGTCT...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CAA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCATTAAACTTTGATTCCTaGAGGACCGGGGTCAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: SCYLASSRDVPVRHNRTSLNFDS*RTGVRY Trigger: GTACCTGACCCCGGTCCTCAAGGAATCAAAGTTTAA...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CAA 90 bp | CAGTGTGATCTCTTTAACGGCTTCCGTTATTCCTGTAATACCTGTGTTGTGATATTCCCCTGTAGCCCATaGCCATGTTGGACAGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: QCDLFNGFRYSCNTCVVIFPCSP*PCWTVV Trigger: CACCACTGTCCAACATGGCAATGGGCTACAGGGGAA...TATCACAACACAGGTATTACAGGAATAACGGAAGCCGTTAAAGAGATCACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| CDS-3UTR CAA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGGGAGCTTACTTTTCATaGGGGGAAACCAATTACTAT | + |
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Preference number: 5 (lower is better) Translates to: LPSCYLASSRDVPVRHNRGAYFS*GETNYY Trigger: ATAGTAATTGGTTTCCCCCAATGAAAAGTAAGCTCC...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CAA 90 bp | CAGTGTGATCTCTTTAACGGCTTCCGTTATTCCTGTAATACCTGTGTTGTGATATTAAACTTTGATTCCTaGAGGACCGGGGTCAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: QCDLFNGFRYSCNTCVVILNFDS*RTGVRY Trigger: GTACCTGACCCCGGTCCTCAAGGAATCAAAGTTTAA...TATCACAACACAGGTATTACAGGAATAACGGAAGCCGTTAAAGAGATCACACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000496423.1 |
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| CDS-3UTR CAA 90 bp | CTTCCAAGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGTCGTTAACAGCCATTTaGCCACTAATCTTACATACA | + |
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Preference number: 5 (lower is better) Translates to: LPSCYLASSRDVPVRHNRSLTAI*PLILHT Trigger: TGTATGTAAGATTAGTGGCAAAATGGCTGTTAACGA...CCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACTTGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CAA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAGATCCAACAGTTTGCTaGGGCATTAACTTGAATGTA | + |
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Preference number: 5 (lower is better) Translates to: SCYLASSRDVPVRHNRTSDPTVC*GINLNV Trigger: TACATTCAAGTTAATGCCCAAGCAAACTGTTGGATC...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS TCA 90 bp | AACAGCCATTTTGCCACTAATCTTACATACAGGGAAGGATACATATaGACTCCAAGTTCTCCCCCTCCTTCTGCAACAGTCTCAATGATT | + |
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Preference number: 5 (lower is better) Translates to: NSHFATNLTYREGYI*TPSSPPPSATVSMI Trigger: AATCATTGAGACTGTTGCAGAAGGAGGGGGAGAACTTGGAGTTCATATGTATCCTTCCCTGTATGTAAGATTAGTGGCAAAATGGCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS-3UTR CAA 90 bp | AGTTGCTACCTAGCATCCAGCAGAGATGTGCCAGTTAGGCATAATAGGACTTCAAGGAGTAAATATGGTTaGGACTGGAAGTTTTTGGTT | + |
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Preference number: 5 (lower is better) Translates to: SCYLASSRDVPVRHNRTSRSKYG*DWKFLV Trigger: AACCAAAAACTTCCAGTCCAAACCATATTTACTCCT...TGAAGTCCTATTATGCCTAACTGGCACATCTCTGCTGGATGCTAGGTAGCAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000402314.6 |
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| CDS CCA 72 bp | TGTCCTCGCTGCCACCGACTCGCATCAGCACCCGGCTaGCAGCACCCGAGGGGACGGGACGCGACGCGACGG | + |
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Preference number: 6 (lower is better) Translates to: CPRCHRLASAPG*QHPRGRDATRR Trigger: CCGTCGCGTCGCGTCCCGTCCCCTCGGGTGCTGCCAGCCGGGTGCTGATGCGAGTCGGTGGCAGCGAGGACA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000283290.10 ENST00000402314.6 ENST00000488910.1 ENST00000495756.5 |
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| CDS TCA 72 bp | CGAGGGAGGGCAGCGGGGCCGAAGGGAGACCTGAGGTaGGAAGCGGACGCACACGCACCCCTCGCCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: RGRAAGPKGDLR*EADAHAPLALC Trigger: GCAGAGGGCGAGGGGTGCGTGTGCGTCCGCTTCTCACCTCAGGTCTCCCTTCGGCCCCGCTGCCCTCCCTCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000283290.10 ENST00000402314.6 ENST00000495756.5 |
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| CDS CAA 90 bp | GACGCACACGCACCCCTCGCCCTCTGCGAGCTGTCTGTCCTCGCTTaGCTTCACTCGCGCCCCTTCCGGCTTCCCTTCCTTCTCACTCTC | + |
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Preference number: 6 (lower is better) Translates to: DAHAPLALCELSVLA*LHSRPFRLPFLLTL Trigger: GAGAGTGAGAAGGAAGGGAAGCCGGAAGGGGCGCGAGTGAAGCAAAGCGAGGACAGACAGCTCGCAGAGGGCGAGGGGTGCGTGTGCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000283290.10 ENST00000495756.5 |
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| CDS GCA 72 bp | TCCGGCTTCCCTTCCTTCTCACTCTCTTGCCGTAGCTaGGCCGCCACCGGGGCCTCACGTGACACTAGACTC | + |
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Preference number: 6 (lower is better) Translates to: SGFPSFSLSCRS*AATGASRDTRL Trigger: GAGTCTAGTGTCACGTGAGGCCCCGGTGGCGGCGCAGCTACGGCAAGAGAGTGAGAAGGAAGGGAAGCCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000492886.5 |
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| CDS GCA 72 bp | TTCCCCTCGCCCTCTGCGAGCTGTCTGTCCTCGCTTTaGTTCACTCGCGCCCCTTCCGGCTTCCCTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: FPSPSASCLSSL*FTRAPSGFPSF Trigger: GAAGGAAGGGAAGCCGGAAGGGGCGCGAGTGAAGCAAAGCGAGGACAGACAGCTCGCAGAGGGCGAGGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492886.5 |
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| CDS CAA 72 bp | ATTCCCCTCGCCCTCTGCGAGCTGTCTGTCCTCGCTTaGCTTCACTCGCGCCCCTTCCGGCTTCCCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: IPLALCELSVLA*LHSRPFRLPFL Trigger: AAGGAAGGGAAGCCGGAAGGGGCGCGAGTGAAGCAAAGCGAGGACAGACAGCTCGCAGAGGGCGAGGGGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000492886.5 |
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| CDS CCA 72 bp | TCACCTCAGCATGCCTGCATGGGTGAACTGAACACATaGGAGGTGGTGGCAGATGAGGGTGATTTTCAATGG | + |
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Preference number: 6 (lower is better) Translates to: SPQHACMGELNT*EVVADEGDFQW Trigger: CCATTGAAAATCACCCTCATCTGCCACCACCTCCCATGTGTTCAGTTCACCCATGCAGGCATGCTGAGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000283290.10 ENST00000402314.6 |
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| CDS GCA 72 bp | CTTGAGGACCGGGGTCAGGTACTCAGCCACTTCCAGTaGCTTTCCCTTCACAGTATTAATCACATTCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: LEDRGQVLSHFQ*LSLHSINHILH Trigger: ATGCAGAATGTGATTAATACTGTGAAGGGAAAGGCACTGGAAGTGGCTGAGTACCTGACCCCGGTCCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000283290.10 ENST00000402314.6 ENST00000465980.1 ENST00000488910.1 ENST00000495756.5 ENST00000496423.1 |
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| CDS CCA 72 bp | CTACATATACAGACCTGCATGGGTGAACTGAACACATaGGAGGTGGTGGCAGATGAGGGTGATTTTCAATGG | + |
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Preference number: 6 (lower is better) Translates to: LHIQTCMGELNT*EVVADEGDFQW Trigger: CCATTGAAAATCACCCTCATCTGCCACCACCTCCCATGTGTTCAGTTCACCCATGCAGGTCTGTATATGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000494571.1 ENST00000495756.5 |
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| CDS TCA 72 bp | ATTTATCTCTACATATACAGACCTGCATGGGTGAACTaGACACATGGGAGGTGGTGGCAGATGAGGGTGATT | + |
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Preference number: 6 (lower is better) Translates to: IYLYIYRPAWVN*THGRWWQMRVI Trigger: AATCACCCTCATCTGCCACCACCTCCCATGTGTTCAGTTCACCCATGCAGGTCTGTATATGTAGAGATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000494571.1 ENST00000495756.5 |
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