RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ATG13 (Homo sapiens)

Ensembl gene IDs: ENSG00000175224

Ensembl transcript IDs: ENST00000359513.8, ENST00000395549.3, ENST00000524625.5, ENST00000525009.5, ENST00000525850.1, ENST00000526485.1, ENST00000526508.5, ENST00000526715.5, ENST00000527907.5, ENST00000528145.5, ENST00000528494.5, ENST00000528704.1, ENST00000528984.5, ENST00000529395.1, ENST00000529655.5, ENST00000530500.5, ENST00000530942.1, ENST00000531933.1, ENST00000532067.1, ENST00000533316.1, ENST00000533325.5, ENST00000534610.5, ENST00000577256.5, ENST00000578626.5, ENST00000579280.1, ENST00000580238.5, ENST00000581416.5, ENST00000581438.5, ENST00000582547.5, ENST00000583249.5, ENST00000683050.1

Found 1049 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGAAGCCAGCCTCCCTTCCACCTGGCTCAGAGCAGGATGAGGGGTaGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCAC +
Preference number: 1 (lower is better)
Translates to: EKPASLPPGSEQDEG*EQLMHGRLLMPWGH
Trigger: GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGAGCCAGGTGGAAGGGAGGCTGGCTTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR TCA 90 bp TGCAAGGCAGGCCCAGGCAGGAGGCCGGCAGCAGGAGGAACAGGATaGCACCCTTGGGAAGCAGTTGGTGATGGGCAGGGCACACAGATG +
Preference number: 1 (lower is better)
Translates to: CKAGPGRRPAAGGTG*HPWEAVGDGQGTQM
Trigger: CATCTGTGTGCCCTGCCCATCACCAACTGCTTCCCAAGGGTGTCATCCTGTTCCTCCTGCTGCCGGCCTCCTGCCTGGGCCTGCCTTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000531933.1
3UTR GCA 90 bp AATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCAGCTaGAAGGCAGGCCCAGGCAGGAGGCCGGCAGCAGGAGGAACAGGA +
Preference number: 1 (lower is better)
Translates to: NVKQWMVTAGREGAS*KAGPGRRPAAGGTG
Trigger: TCCTGTTCCTCCTGCTGCCGGCCTCCTGCCTGGGCCTGCCTTGCAGCTGGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
3UTR CCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTaGGTCCCCATGGGAGAAGCCAGCCTCCCTTCCACCTGGCTCAGA +
Preference number: 1 (lower is better)
Translates to: DCRHGVSRRSKSRDF*VPMGEASLPSTWLR
Trigger: TCTGAGCCAGGTGGAAGGGAGGCTGGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR CCA 90 bp CAGGAGGGCCAGTTGGCTGCTACTGCTTCTGCTAACACTTCTTGGTaGCAGCAGCAGCACGCAGAGCTCTGGTCCCCGCCAGAGCCTGCT +
Preference number: 1 (lower is better)
Translates to: QEGQLAATASANTSW*QQQHAELWSPPEPA
Trigger: AGCAGGCTCTGGCGGGGACCAGAGCTCTGCGTGCTGCTGCTGCCACCAAGAAGTGTTAGCAGAAGCAGTAGCAGCCAACTGGCCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR GCA 90 bp CAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTaGCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGG +
Preference number: 1 (lower is better)
Translates to: QGQHVSLLQLGTGLD*RHGVSRRSKSRDFW
Trigger: CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR CCA 90 bp ACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATaGGAGAAGCCAGCCTCCCTTCCACCTGGCTCAGAGCAGGATGAG +
Preference number: 1 (lower is better)
Translates to: TESPGGPRVGTSGSP*EKPASLPPGSEQDE
Trigger: CTCATCCTGCTCTGAGCCAGGTGGAAGGGAGGCTGGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR CCA 90 bp AGTCAGGAGGGCCAGTTGGCTGCTACTGCTTCTGCTAACACTTCTTaGTGGCAGCAGCAGCACGCAGAGCTCTGGTCCCCGCCAGAGCCT +
Preference number: 1 (lower is better)
Translates to: SQEGQLAATASANTS*WQQQHAELWSPPEP
Trigger: AGGCTCTGGCGGGGACCAGAGCTCTGCGTGCTGCTGCTGCCACCAAGAAGTGTTAGCAGAAGCAGTAGCAGCCAACTGGCCCTCCTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 90 bp AAAGTAGGTTGGAGAGGTTGGAGGAGGAGGAGGGACTCTGACACCTaGAGACAAACAGCTGGTCCCAGCCTGTCCCGGGGGTGCTGCAGG +
Preference number: 1 (lower is better)
Translates to: KVGWRGWRRRRDSDT*RQTAGPSLSRGCCR
Trigger: CCTGCAGCACCCCCGGGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCTCCAACCTCTCCAACCTACTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 90 bp TTGCCACTGCTGCCCCCGCTGGAGCCATCTGAGTGCAGGCTGCCCTaGAGAGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCCGT +
Preference number: 1 (lower is better)
Translates to: LPLLPPLEPSECRLP*RGDSVSGESGGFTR
Trigger: ACGGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532067.1
3UTR GCA 90 bp GGCCTTGGGGATAAACCTGAGCCTGGGTTCAGCAAGCCACGCATGTaGTCTGGGCCAAAGTCAGGAGGGCCAGTTGGCTGCTACTGCTTC +
Preference number: 1 (lower is better)
Translates to: GLGDKPEPGFSKPRM*SGPKSGGPVGCYCF
Trigger: GAAGCAGTAGCAGCCAACTGGCCCTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTTTATCCCCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR GCA 90 bp GACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCCGGGGGTGCTaGAGGAGTCAGTCTAGGGCTCATTCCTTTCATGGCAGGTCTGAG +
Preference number: 1 (lower is better)
Translates to: DTWRQTAGPSLSRGC*RSQSRAHSFHGRSE
Trigger: CTCAGACCTGCCATGAAAGGAATGAGCCCTAGACTGACTCCTGCAGCACCCCCGGGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR GCA 90 bp GGGTATTGCCACTGCTGCCCCCGCTGGAGCCATCTGAGTGCAGGCTaGCCTGGAGAGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCA +
Preference number: 1 (lower is better)
Translates to: GYCHCCPRWSHLSAG*PGEEIQSLGNLEDS
Trigger: TGAATCCTCCAGATTCCCCAGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTGGCAATACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529395.1
3UTR CCA 90 bp GCAGCCACACTGGGAGGTGACTTTGCCCCCGGCCAGCCCTCTTCTTaGATCTCGCTGTCTGTATGGTGGGAAGATCCTCAAAGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: AATLGGDFAPGQPSS*ISLSVWWEDPQSSS
Trigger: GCTGCTGCTTTGAGGATCTTCCCACCATACAGACAGCGAGATCCAAGAAGAGGGCTGGCCGGGGGCAAAGTCACCTCCCAGTGTGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 90 bp TTGCCACTGCTGCCCCCGCTGGAGCCATCTGAGTGCAGGCTGCCCTaGAGAGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCTGT +
Preference number: 1 (lower is better)
Translates to: LPLLPPLEPSECRLP*RGDSVSGESGGFTC
Trigger: ACAGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529395.1
3UTR GCA 90 bp TTGGTGGCAGCAGCAGCACGCAGAGCTCTGGTCCCCGCCAGAGCCTaGTCCAATCCTCAGAAGTCAGCCTTGTATGTGGGAACAGTGTCA +
Preference number: 1 (lower is better)
Translates to: LVAAAARRALVPARA*SNPQKSALYVGTVS
Trigger: TGACACTGTTCCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGAGCTCTGCGTGCTGCTGCTGCCACCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR GCA 90 bp TCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCCGGGGGTaGTGCAGGAGTCAGTCTAGGGCTCATTCCTTTCATGGCAGGTCT +
Preference number: 1 (lower is better)
Translates to: SDTWRQTAGPSLSRG*CRSQSRAHSFHGRS
Trigger: AGACCTGCCATGAAAGGAATGAGCCCTAGACTGACTCCTGCAGCACCCCCGGGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR GCA 90 bp TCATCATGGGTATTGCCACTGCTGCCCCCGCTGGAGCCATCTGAGTaGAGGCTGCCCTGGAGAGGAGATTCAGTCTCTGGGGAATCTGGA +
Preference number: 1 (lower is better)
Translates to: SSWVLPLLPPLEPSE*RLPWRGDSVSGESG
Trigger: TCCAGATTCCCCAGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTGGCAATACCCATGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529395.1
3UTR CCA 90 bp GCTTCTGCTAACACTTCTTGGTGGCAGCAGCAGCACGCAGAGCTCTaGTCCCCGCCAGAGCCTGCTCCAATCCTCAGAAGTCAGCCTTGT +
Preference number: 1 (lower is better)
Translates to: ASANTSWWQQQHAEL*SPPEPAPILRSQPC
Trigger: ACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGAGCTCTGCGTGCTGCTGCTGCCACCAAGAAGTGTTAGCAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 90 bp CAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGGGCCAGTTaGCTGCTACTGCTTCTGCTAACACTTCTTGGTGGCAGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: QQATHVLWAKVRRAS*LLLLLLTLLGGSSS
Trigger: GCTGCTGCTGCCACCAAGAAGTGTTAGCAGAAGCAGTAGCAGCCAACTGGCCCTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR TCA 90 bp CTTGGGAAGCAGTTGGTGATGGGCAGGGCACACAGATGGCCCTGCTaGGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGC +
Preference number: 1 (lower is better)
Translates to: LGKQLVMGRAHRWPC*GLFRTKVLPISKAS
Trigger: GCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATCTGTGTGCCCTGCCCATCACCAACTGCTTCCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR GCA 90 bp CACACCCGACTCAAAACAGGCTTGCCCAGACACTTGAGGTCTTTCTaGGCTTCACAACGCACCACTCTCCCCTTTCCCAGACCTGCACTG +
Preference number: 1 (lower is better)
Translates to: HTRLKTGLPRHLRSF*ASQRTTLPFPRPAL
Trigger: CAGTGCAGGTCTGGGAAAGGGGAGAGTGGTGCGTTGTGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGCCTGTTTTGAGTCGGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359513.8
3UTR CCA 90 bp TCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTaGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCC +
Preference number: 1 (lower is better)
Translates to: SFLFLRLHTNLLATS*NVKQWMVTAGREGA
Trigger: GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR GCA 90 bp TGGAGCCCTGGTGAAAGGCTGCTGCCACCTGTAGATGCCAAAGATTaGTGCCTCAGACAATGGCTAGGCCTTTCCATGCAAGGCCTTGGA +
Preference number: 1 (lower is better)
Translates to: WSPGERLLPPVDAKD*CLRQWLGLSMQGLG
Trigger: TCCAAGGCCTTGCATGGAAAGGCCTAGCCATTGTCTGAGGCAGCAATCTTTGGCATCTACAGGTGGCAGCAGCCTTTCACCAGGGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 90 bp CCAGGCAGTTGGGGGACACACACAACATCCCCTAACCACTACATGTaGCCATCACATTTAGCACCCAGGACTTCCTGGGCTGCCAGAATG +
Preference number: 1 (lower is better)
Translates to: PGSWGTHTTSPNHYM*PSHLAPRTSWAARM
Trigger: CATTCTGGCAGCCCAGGAAGTCCTGGGTGCTAAATGTGATGGCCACATGTAGTGGTTAGGGGATGTTGTGTGTGTCCCCCAACTGCCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR TCA 90 bp CTCAGACCCTCCCGACCTTCAGGGGTGGGAGTGGTTTTGGAGTTCTaGTCTTGGGTAGGCAGGCCTGTCATATTGCCAGAAATACAGGCA +
Preference number: 1 (lower is better)
Translates to: LRPSRPSGVGVVLEF*SWVGRPVILPEIQA
Trigger: TGCCTGTATTTCTGGCAATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCTGAAGGTCGGGAGGGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR GCA 90 bp GGGACTCCTTCCTTCTTCCTCCTGGCACTGTCTCCTTCCTCTTTCTaGGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAAC +
Preference number: 1 (lower is better)
Translates to: GTPSFFLLALSPSSF*DSTPISWPPAGMSN
Trigger: GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGACAGTGCCAGGAGGAAGAAGGAAGGAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR GCA 90 bp AGCCCTGGTGAAAGGCTGCTGCCACCTGTAGATGCCAAAGATTGCTaGCTCAGACAATGGCTAGGCCTTTCCATGCAAGGCCTTGGAAAG +
Preference number: 1 (lower is better)
Translates to: SPGERLLPPVDAKDC*LRQWLGLSMQGLGK
Trigger: CTTTCCAAGGCCTTGCATGGAAAGGCCTAGCCATTGTCTGAGGCAGCAATCTTTGGCATCTACAGGTGGCAGCAGCCTTTCACCAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 90 bp CATGGACTGTGCTCCAATATCTATGGAGAGGCTGCTCAGCTGAGGTaGGTTCTGAAACTCCCGATAGAAGGTCCCCAGGTCCATCGGAAG +
Preference number: 1 (lower is better)
Translates to: HGLCSNIYGEAAQLR*VLKLPIEGPQVHRK
Trigger: CTTCCGATGGACCTGGGGACCTTCTATCGGGAGTTTCAGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATATTGGAGCACAGTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
3UTR CCA 90 bp AGGCTGCTGCCACCTGTAGATGCCAAAGATTGCTGCCTCAGACAATaGCTAGGCCTTTCCATGCAAGGCCTTGGAAAGAGAGCAGTAGCT +
Preference number: 1 (lower is better)
Translates to: RLLPPVDAKDCCLRQ*LGLSMQGLGKRAVA
Trigger: AGCTACTGCTCTCTTTCCAAGGCCTTGCATGGAAAGGCCTAGCCATTGTCTGAGGCAGCAATCTTTGGCATCTACAGGTGGCAGCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 90 bp CTGGAGGATTCACCCGTAAGCCGAGGGGCCATGGTTTATAGTCTGTaGGGGATTAGTGACTCTGGCTCAGGAAGAACAATGACTAGCGCA +
Preference number: 1 (lower is better)
Translates to: LEDSPVSRGAMVYSL*GISDSGSGRTMTSA
Trigger: TGCGCTAGTCATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACTATAAACCATGGCCCCTCGGCTTACGGGTGAATCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532067.1
3UTR CCA 90 bp GCTGGCTACAAACCCGTAAGCCGAGGGGCCATGGTTTATAGTCTGTaGGGGATTAGTGACTCTGGCTCAGGAAGAACAATGACTAGCGCA +
Preference number: 1 (lower is better)
Translates to: AGYKPVSRGAMVYSL*GISDSGSGRTMTSA
Trigger: TGCGCTAGTCATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACTATAAACCATGGCCCCTCGGCTTACGGGTTTGTAGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529395.1
3UTR GCA 90 bp CCACTACATGTGGCCATCACATTTAGCACCCAGGACTTCCTGGGCTaGCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGGGAGATGTA +
Preference number: 1 (lower is better)
Translates to: PLHVAITFSTQDFLG*QNGVSHSAETVGDV
Trigger: TACATCTCCCACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTGCTAAATGTGATGGCCACATGTAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 90 bp TCCCCGCCAGAGCCTGCTCCAATCCTCAGAAGTCAGCCTTGTATGTaGGAACAGTGTCACATGCAGTATACTAACAAGCAGCTGAGAACC +
Preference number: 1 (lower is better)
Translates to: SPPEPAPILRSQPCM*EQCHMQYTNKQLRT
Trigger: GGTTCTCAGCTGCTTGTTAGTATACTGCATGTGACACTGTTCCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 90 bp GGCCTTAACAGTTGCTTTACTTCTCCCAAGCTCAGCTCAAAGTCATaGCTGAGACTCTTCACAGATGGAGCCCTGGTGAAAGGCTGCTGC +
Preference number: 1 (lower is better)
Translates to: GLNSCFTSPKLSSKS*LRLFTDGALVKGCC
Trigger: GCAGCAGCCTTTCACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGAGAAGTAAAGCAACTGTTAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR TCA 90 bp CAAGTAACAATACCTGAAGGGTTAAGTCAATCATACGCCCAGCTTTaGTTTCTCAACCAGAAGCCAATCCAGCTGGTAAACCCCAGGGCA +
Preference number: 1 (lower is better)
Translates to: QVTIPEGLSQSYAQL*FLNQKPIQLVNPRA
Trigger: TGCCCTGGGGTTTACCAGCTGGATTGGCTTCTGGTTGAGAAATCAAAGCTGGGCGTATGATTGACTTAACCCTTCAGGTATTGTTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR TCA 90 bp CGAGGCTGGGAAAGGACAGATCATAGGTGGGTGAGGCTAGGCACTTaGCTTATTCAAGTAACAATACCTGAAGGGTTAAGTCAATCATAC +
Preference number: 1 (lower is better)
Translates to: RGWERTDHRWVRLGT*LIQVTIPEGLSQSY
Trigger: GTATGATTGACTTAACCCTTCAGGTATTGTTACTTGAATAAGTCAAGTGCCTAGCCTCACCCACCTATGATCTGTCCTTTCCCAGCCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR GCA 90 bp CACTGGGAGGTGACTTTGCCCCCGGCCAGCCCTCTTCTTGGATCTCGCTGTCTGGGCAGCCACCAGGGCTaGTCAGACCCTCCCGACCTT +
Preference number: 2 (lower is better)
Translates to: HWEVTLPPASPLLGSRCLGSHQG*SDPPDL
Trigger: AAGGTCGGGAGGGTCTGAGCAGCCCTGGTGGCTGCC...CAGACAGCGAGATCCAAGAAGAGGGCTGGCCGGGGGCAAAGTCACCTCCCAGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR TCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGGGGTGGGAGCAGCTaGTGCATGGGAGGCTGCTTA +
Preference number: 2 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKRGGSS*CMGGCL
Trigger: TAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCT...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR TCA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCACTGGGCACTGGGCTTaGCTGCCGCCACGGAGTCTC +
Preference number: 2 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSTGHWA*LPPRSL
Trigger: GAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGT...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCGGAGCAGCTGATGCATaGGAGGCTGCTTATGCCCTG +
Preference number: 2 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPGAADA*EAAYAL
Trigger: CAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCC...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGACTTCTGGGTCCCCATaGGAGAAGCCAGCCTCCCTT +
Preference number: 2 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKTSGSP*EKPASL
Trigger: AAGGGAGGCTGGCTTCTCCCATGGGGACCCAGAAGT...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR TCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACACTGGGCACTGGGCTTaGCTGCCGCCACGGAGTCTC +
Preference number: 2 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHTGHWA*LPPRSL
Trigger: GAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGT...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR TCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGACTGGGCACTGGGCTTaGCTGCCGCCACGGAGTCTC +
Preference number: 2 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRTGHWA*LPPRSL
Trigger: GAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGT...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
3UTR-3UTR TCA 90 bp CACTGGGAGGTGACTTTGCCCCCGGCCAGCCCTCTTCTTGGATCTCGCTGTCTGTCCAAGGCCAGCACGTaGGTCTTCTCCAACTGGGCA +
Preference number: 2 (lower is better)
Translates to: HWEVTLPPASPLLGSRCLSKAST*VFSNWA
Trigger: TGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGA...CAGACAGCGAGATCCAAGAAGAGGGCTGGCCGGGGGCAAAGTCACCTCCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGGCTGCTTATGCCCTaGGGCCACAAAAAGGGGGTG +
Preference number: 2 (lower is better)
Translates to: FSNWALGLTAATESPGGPRLLMP*GHKKGV
Trigger: CACCCCCTTTTTGTGGCCCCAGGGCATAAGCAGCCT...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGGGAGCAGCTGATGCATaGGAGGCTGCTTATGCCCTG +
Preference number: 2 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEGAADA*EAAYAL
Trigger: CAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCC...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAACTTCTGGGTCCCCATaGGAGAAGCCAGCCTCCCTT +
Preference number: 2 (lower is better)
Translates to: FSNWALGLTAATESPGGPTSGSP*EKPASL
Trigger: AAGGGAGGCTGGCTTCTCCCATGGGGACCCAGAAGT...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp AACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGCCAGTGCAGCCACACTaGGAGGTGACTTTGCCCCCG +
Preference number: 2 (lower is better)
Translates to: NLSLGSASHACALGQSQEPVQPH*EVTLPP
Trigger: CGGGGGCAAAGTCACCTCCCAGTGTGGCTGCACTGG...CTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp TCTGGTCCCCGCCAGAGCCTGCTCCAATCCTCAGAAGTCAGCCTTGTATGTGGGCCAGTGCAGCCACACTaGGAGGTGACTTTGCCCCCG +
Preference number: 2 (lower is better)
Translates to: SGPRQSLLQSSEVSLVCGPVQPH*EVTLPP
Trigger: CGGGGGCAAAGTCACCTCCCAGTGTGGCTGCACTGG...CCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR TCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAACTGGGCACTGGGCTTaGCTGCCGCCACGGAGTCTC +
Preference number: 2 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPTGHWA*LPPRSL
Trigger: GAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGT...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAAGAGTAGGGACTTCTaGGTCCCCATGGGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSKSRDF*VPMGEA
Trigger: GGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTT...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR TCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCCACAGATGGCCCTGCTaGGGGCTTTTTCGTACGAAG +
Preference number: 2 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAHRWPC*GLFRTK
Trigger: CTTCGTACGAAAAAGCCCTCAGCAGGGCCATCTGTG...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
3UTR-3UTR GCA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCCAGGACTTCCTGGGCTaGCAGAATGGAGTCAGTCAC +
Preference number: 2 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSQDFLG*QNGVSH
Trigger: GTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTG...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp TCTGGTCCCCGCCAGAGCCTGCTCCAATCCTCAGAAGTCAGCCTTGTATGTGGGAGGCTGCTTATGCCCTaGGGCCACAAAAAGGGGGTG +
Preference number: 2 (lower is better)
Translates to: SGPRQSLLQSSEVSLVCGRLLMP*GHKKGV
Trigger: CACCCCCTTTTTGTGGCCCCAGGGCATAAGCAGCCT...CCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp TCTGGTCCCCGCCAGAGCCTGCTCCAATCCTCAGAAGTCAGCCTTGTATGTGGGGGAGCAGCTGATGCATaGGAGGCTGCTTATGCCCTG +
Preference number: 2 (lower is better)
Translates to: SGPRQSLLQSSEVSLVCGGAADA*EAAYAL
Trigger: CAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCC...CCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCAAGAGTAGGGACTTCTaGGTCCCCATGGGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAKSRDF*VPMGEA
Trigger: GGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTT...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp GGCCTTGGGGATAAACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGGTCAGGAGGGCCAGTTaGCTGCTACTGCTTCTGCTA +
Preference number: 2 (lower is better)
Translates to: GLGDKPEPGFSKPRMCSGVRRAS*LLLLLL
Trigger: TAGCAGAAGCAGTAGCAGCCAACTGGCCCTCCTGAC...CCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTTTATCCCCAAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CAA 90 bp TCAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGGGCCAGTaGGCTGCTACTGCTTCTGCTAACACTTCTTGGTGGCAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: SASHACALGQSQEGQ*AATASANTSWWQQQ
Trigger: CTGCTGCTGCCACCAAGAAGTGTTAGCAGAAGCAGTAGCAGCCAACTGGCCCTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR TCA 90 bp ACTGTCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAGGGGTGGGAGCAGCTaGTGCATGGGAGGCTGCTTA +
Preference number: 2 (lower is better)
Translates to: TVSFLFLRLHTNLLATSWRGGSS*CMGGCL
Trigger: TAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCT...CCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR-3UTR TCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCAGGGGTGGGAGCAGCTaGTGCATGGGAGGCTGCTTA +
Preference number: 2 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGRGGSS*CMGGCL
Trigger: TAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCT...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR TCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACACTGGGCACTGGGCTTaGCTGCCGCCACGGAGTCTC +
Preference number: 2 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNTGHWA*LPPRSL
Trigger: GAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGT...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR-3UTR TCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTACTGGGCACTGGGCTTaGCTGCCGCCACGGAGTCTC +
Preference number: 2 (lower is better)
Translates to: GFFVRRFFPSPRPARESSTGHWA*LPPRSL
Trigger: GAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGT...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR TCA 90 bp TCTGGTCCCCGCCAGAGCCTGCTCCAATCCTCAGAAGTCAGCCTTGTATGTGGGGCAGGAGGAACAGGATaGCACCCTTGGGAAGCAGTT +
Preference number: 2 (lower is better)
Translates to: SGPRQSLLQSSEVSLVCGAGGTG*HPWEAV
Trigger: AACTGCTTCCCAAGGGTGTCATCCTGTTCCTCCTGC...CCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR TCA 90 bp TCTGGTCCCCGCCAGAGCCTGCTCCAATCCTCAGAAGTCAGCCTTGTATGTGGGAGACCTAGATCTCCTTaGCCAGGACTACCAGCGAGG +
Preference number: 2 (lower is better)
Translates to: SGPRQSLLQSSEVSLVCGRPRSP*PGLPAR
Trigger: CCTCGCTGGTAGTCCTGGTCAAGGAGATCTAGGTCT...CCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR GCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGACAAAAAGGGGGTGCTaGTGGGACTCAAGGATACTT +
Preference number: 2 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKTKRGC*WDSRIL
Trigger: AAGTATCCTTGAGTCCCAGCAGCACCCCCTTTTTGT...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGAGCAGCTGATGCATaGGAGGCTGCTTATGCCCTG +
Preference number: 2 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRGAADA*EAAYAL
Trigger: CAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCC...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGGAGCAGCTGATGCATaGGAGGCTGCTTATGCCCTG +
Preference number: 2 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHGAADA*EAAYAL
Trigger: CAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCC...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACACTTCTGGGTCCCCATaGGAGAAGCCAGCCTCCCTT +
Preference number: 2 (lower is better)
Translates to: RRFFPSPRPARESSPTGHTSGSP*EKPASL
Trigger: AAGGGAGGCTGGCTTCTCCCATGGGGACCCAGAAGT...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp AAAAGCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGCACCCAGGACTTCCTaGGCTGCCAGAATGGAGTCA +
Preference number: 2 (lower is better)
Translates to: KSSTGQPQGSGTSTQAVGAPRTS*AARMES
Trigger: TGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTGC...CCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR TCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGAGGGGTGGGAGCAGCTaGTGCATGGGAGGCTGCTTA +
Preference number: 2 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMRGGSS*CMGGCL
Trigger: TAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCT...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR-3UTR TCA 90 bp TGCTGCAGGAGTCAGTCTAGGGCTCATTCCTTTCATGGCAGGTCTGAGGGGCAATCCAAGGCCAGCACGTaGGTCTTCTCCAACTGGGCA +
Preference number: 2 (lower is better)
Translates to: CCRSQSRAHSFHGRSEGQSKAST*VFSNWA
Trigger: TGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGA...TTGCCCCTCAGACCTGCCATGAAAGGAATGAGCCCTAGACTGACTCCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR TCA 90 bp TGCTGCAGGAGTCAGTCTAGGGCTCATTCCTTTCATGGCAGGTCTGAGGGGCAATCAAACAGTGGATGGTaGCAGCAGGCAGGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: CCRSQSRAHSFHGRSEGQSNSGW*QQAGKG
Trigger: CCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGA...TTGCCCCTCAGACCTGCCATGAAAGGAATGAGCCCTAGACTGACTCCTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR GCA 90 bp AAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGAAAGCTGCTGCCAGTGAATaGCCCAGGTGGGCCAGGAGG +
Preference number: 2 (lower is better)
Translates to: KLSSKSWLRLFTDGALVKAAASE*PRWARR
Trigger: CCTCCTGGCCCACCTGGGGCATTCACTGGCAGCAGC...TTTCACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp TCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGCTGCTTATGCCCTaGGGCCACAAAAAGGGGGTG +
Preference number: 2 (lower is better)
Translates to: SLGHQLECQTVDGDSRQGRLLMP*GHKKGV
Trigger: CACCCCCTTTTTGTGGCCCCAGGGCATAAGCAGCCT...TCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp TCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAGGAGCAGCTGATGCATaGGAGGCTGCTTATGCCCTG +
Preference number: 2 (lower is better)
Translates to: SLGHQLECQTVDGDSRQGGAADA*EAAYAL
Trigger: CAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCC...TCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAACTTCTGGGTCCCCATaGGAGAAGCCAGCCTCCCTT +
Preference number: 2 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPTSGSP*EKPASL
Trigger: AAGGGAGGCTGGCTTCTCCCATGGGGACCCAGAAGT...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR CAA 90 bp CCTGGCACTGTCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTaGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGC +
Preference number: 2 (lower is better)
Translates to: PGTVSFLFLRLHTNL*ATSWNVKQWMVTAG
Trigger: GCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGACAGTGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR CAA 90 bp CAGGGTATACAGCCCCTAAGAGGCCACACCCGACTCAAAACAGGCTaGCCCAGACACTTGAGGTCTTTCTGCGCTTCACAACGCACCACT +
Preference number: 2 (lower is better)
Translates to: QGIQPLRGHTRLKTG*PRHLRSFCASQRTT
Trigger: AGTGGTGCGTTGTGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGCCTGTTTTGAGTCGGGTGTGGCCTCTTAGGGGCTGTATACCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359513.8
3UTR-3UTR TCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTAGGGGTGGGAGCAGCTaGTGCATGGGAGGCTGCTTA +
Preference number: 2 (lower is better)
Translates to: GFFVRRFFPSPRPARESSRGGSS*CMGGCL
Trigger: TAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCT...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR TCA 90 bp TGCTGCAGGAGTCAGTCTAGGGCTCATTCCTTTCATGGCAGGTCTGAGGGGCAAGCAGGAGGAACAGGATaGCACCCTTGGGAAGCAGTT +
Preference number: 2 (lower is better)
Translates to: CCRSQSRAHSFHGRSEGQAGGTG*HPWEAV
Trigger: AACTGCTTCCCAAGGGTGTCATCCTGTTCCTCCTGC...TTGCCCCTCAGACCTGCCATGAAAGGAATGAGCCCTAGACTGACTCCTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR TCA 90 bp TTCAGTCTCTGGGGAATCTGGAGGATTCACCTGTTTCATAGCAAGGCAGGATTACCCGCTGGAGCCATCTaGGTGCAGGCTGCCCTGGAG +
Preference number: 2 (lower is better)
Translates to: FSLWGIWRIHLFHSKAGLPAGAI*VQAALE
Trigger: CTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGG...TAATCCTGCCTTGCTATGAAACAGGTGAATCCTCCAGATTCCCCAGAGACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
3UTR-3UTR GCA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCACAAAAAGGGGGTGCTaGTGGGACTCAAGGATACTT +
Preference number: 2 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSTKRGC*WDSRIL
Trigger: AAGTATCCTTGAGTCCCAGCAGCACCCCCTTTTTGT...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR GCA 90 bp TCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAATGGGAGGCTGCTTATaGCCTGGGGCCACAAAAAGG +
Preference number: 2 (lower is better)
Translates to: SLGHQLECQTVDGDSRQGMGGCL*PGATKR
Trigger: CCTTTTTGTGGCCCCAGGGCATAAGCAGCCTCCCAT...TCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
3UTR-3UTR GCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCATGGGAGGCTGCTTATaGCCTGGGGCCACAAAAAGG +
Preference number: 2 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGMGGCL*PGATKR
Trigger: CCTTTTTGTGGCCCCAGGGCATAAGCAGCCTCCCAT...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR GCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAATGGGAGGCTGCTTATaGCCTGGGGCCACAAAAAGG +
Preference number: 2 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPMGGCL*PGATKR
Trigger: CCTTTTTGTGGCCCCAGGGCATAAGCAGCCTCCCAT...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp CACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGAGGCTGCTTATGCCCTaGGGCCACAAAAAGGGGGTG +
Preference number: 2 (lower is better)
Translates to: HQSLGHQLECQTVDGDSRRLLMP*GHKKGV
Trigger: CACCCCCTTTTTGTGGCCCCAGGGCATAAGCAGCCT...CCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp CACCCAGGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTAAGAGTAGGGACTTCTaGGTCCCCATGGGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: HPGLPGLPEWSQSLCRNCKSRDF*VPMGEA
Trigger: GGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTT...ACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp AACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGCTCTTGGCCACCAGCTaGAATGTCAAACAGTGGATG +
Preference number: 2 (lower is better)
Translates to: NLSLGSASHACALGQSQELLATS*NVKQWM
Trigger: CATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAG...CTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp GGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGGGAGACCCGACCTTCAGGGGTaGGAGTGGTTTTGGAGTTCT +
Preference number: 2 (lower is better)
Translates to: GLPGLPEWSQSLCRNCGRPDLQG*EWFWSS
Trigger: AGAACTCCAAAACCACTCCCACCCCTGAAGGTCGGG...TCTCCCACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCATCTCGCTGTCTGTATaGTGGGAAGATCCTCAAAGC +
Preference number: 2 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSISLSV*WEDPQS
Trigger: GCTTTGAGGATCTTCCCACCATACAGACAGCGAGAT...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR TCA 90 bp CTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGTCCAAGGCCAGCACGTaGGTCTTCTCCAACTGGGCA +
Preference number: 2 (lower is better)
Translates to: LSATPHQSLGHQLECQTVSKAST*VFSNWA
Trigger: TGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGA...CACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCAGGCTGCTTATGCCCTaGGGCCACAAAAAGGGGGTG +
Preference number: 2 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLRLLMP*GHKKGV
Trigger: CACCCCCTTTTTGTGGCCCCAGGGCATAAGCAGCCT...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp AAAAGCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGCTCTTGGCCACCAGCTaGAATGTCAAACAGTGGATG +
Preference number: 2 (lower is better)
Translates to: KSSTGQPQGSGTSTQAVGLLATS*NVKQWM
Trigger: CATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAG...CCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp TCCCAAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGGCCAGCCCTCTTCTTaGATCTCGCTGTCTGTATGG +
Preference number: 2 (lower is better)
Translates to: SQAQLKVMAETLHRWSPGGQPSS*ISLSVW
Trigger: CCATACAGACAGCGAGATCCAAGAAGAGGGCTGGCC...ACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CAA 90 bp ACCCTCCCGACCTTCAGGGGTGGGAGTGGTTTTGGAGTTCTGATCTaGGGTAGGCAGGCCTGTCATATTGCCAGAAATACAGGCATAGAG +
Preference number: 2 (lower is better)
Translates to: TLPTFRGGSGFGVLI*GRQACHIARNTGIE
Trigger: CTCTATGCCTGTATTTCTGGCAATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCTGAAGGTCGGGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR-3UTR TCA 90 bp GGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTGCCAGAGCAGGAGGAACAGGATaGCACCCTTGGGAAGCAGTT +
Preference number: 2 (lower is better)
Translates to: GSGFGVLILGRQACHIARAGGTG*HPWEAV
Trigger: AACTGCTTCCCAAGGGTGTCATCCTGTTCCTCCTGC...TCTGGCAATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR-3UTR GCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACACAAAAAGGGGGTGCTaGTGGGACTCAAGGATACTT +
Preference number: 2 (lower is better)
Translates to: RRFFPSPRPARESSPTGHTKRGC*WDSRIL
Trigger: AAGTATCCTTGAGTCCCAGCAGCACCCCCTTTTTGT...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR GCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACACAAAAAGGGGGTGCTaGTGGGACTCAAGGATACTT +
Preference number: 2 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHTKRGC*WDSRIL
Trigger: AAGTATCCTTGAGTCCCAGCAGCACCCCCTTTTTGT...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR GCA 90 bp GAGAGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCTGTTTCATAGCAAGCTGGAGCCATCTGAGTaGAGGCTGCCCTGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: ERRFSLWGIWRIHLFHSKLEPSE*RLPWRG
Trigger: TCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAG...CTTGCTATGAAACAGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
3UTR-3UTR CCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTAAGAGTAGGGACTTCTaGGTCCCCATGGGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: GFFVRRFFPSPRPARESSKSRDF*VPMGEA
Trigger: GGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTT...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR CCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCAAGAGTAGGGACTTCTaGGTCCCCATGGGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLKSRDF*VPMGEA
Trigger: GGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTT...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR TCA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACACAGATGGCCCTGCTaGGGGCTTTTTCGTACGAAG +
Preference number: 2 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKHRWPC*GLFRTK
Trigger: CTTCGTACGAAAAAGCCCTCAGCAGGGCCATCTGTG...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR-3UTR GCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGACAAAAAGGGGGTGCTaGTGGGACTCAAGGATACTT +
Preference number: 2 (lower is better)
Translates to: AEGFFVRRFFPSPRPARETKRGC*WDSRIL
Trigger: AAGTATCCTTGAGTCCCAGCAGCACCCCCTTTTTGT...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR-3UTR GCA 90 bp CAGGAAGTAAAGGGGACAATGAAGAGAGCTAAGGGACTCCTTCCTTCTTCCTCCATGGGAGGCTGCTTATaGCCTGGGGCCACAAAAAGG +
Preference number: 2 (lower is better)
Translates to: QEVKGTMKRAKGLLPSSSMGGCL*PGATKR
Trigger: CCTTTTTGTGGCCCCAGGGCATAAGCAGCCTCCCAT...GGAGGAAGAAGGAAGGAGTCCCTTAGCTCTCTTCATTGTCCCCTTTACTTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR-3UTR GCA 90 bp CACCCGACTCAAAACAGGCTTGCCCAGACACTTGAGGTCTTTCTGCGCTTCACAGCTGGCCTTAACAGTTaGTTTACTTCTCCCAAGCTC +
Preference number: 2 (lower is better)
Translates to: HPTQNRLAQTLEVFLRFTAGLNS*FTSPKL
Trigger: GAGCTTGGGAGAAGTAAAGCAACTGTTAAGGCCAGC...TGTGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGCCTGTTTTGAGTCGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359513.8
3UTR-3UTR TCA 90 bp GGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGGGAGATGCTGTGACTCCAAGTaGCAAAATCCTAGAGATTCA +
Preference number: 2 (lower is better)
Translates to: GLPGLPEWSQSLCRNCGRCCDSK*QNPRDS
Trigger: TGAATCTCTAGGATTTTGTCACTTGGAGTCACAGCA...TCTCCCACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR TCA 90 bp TGCTGCAGGAGTCAGTCTAGGGCTCATTCCTTTCATGGCAGGTCTGAGGGGCAAAAGAGAACTTTGCTGTaGCTCCAAGTGACAAAATCC +
Preference number: 2 (lower is better)
Translates to: CCRSQSRAHSFHGRSEGQKRTLL*LQVTKS
Trigger: GGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTT...TTGCCCCTCAGACCTGCCATGAAAGGAATGAGCCCTAGACTGACTCCTGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR GCA 90 bp GGGAGATGTAAGGCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAATGGGAGGCTGCTTATaGCCTGGGGCCACAAAAAGG +
Preference number: 2 (lower is better)
Translates to: GRCKALTRNTQLSKVKPLMGGCL*PGATKR
Trigger: CCTTTTTGTGGCCCCAGGGCATAAGCAGCCTCCCAT...TAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGCCTTACATCTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR GCA 90 bp CACCCGACTCAAAACAGGCTTGCCCAGACACTTGAGGTCTTTCTGCGCTTCACAGTAGATGCCAAAGATTaGTGCCTCAGACAATGGCTA +
Preference number: 2 (lower is better)
Translates to: HPTQNRLAQTLEVFLRFTVDAKD*CLRQWL
Trigger: TAGCCATTGTCTGAGGCAGCAATCTTTGGCATCTAC...TGTGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGCCTGTTTTGAGTCGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359513.8
3UTR-3UTR CCA 90 bp AAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGAAAATCTCGCTGTCTGTATaGTGGGAAGATCCTCAAAGC +
Preference number: 2 (lower is better)
Translates to: KLSSKSWLRLFTDGALVKISLSV*WEDPQS
Trigger: GCTTTGAGGATCTTCCCACCATACAGACAGCGAGAT...TTTCACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp GGACAAGAGGAAGAGAACTTTGCTGTGACTCCAAGTGACAAAATCCTAGAGATTAAGAGTAGGGACTTCTaGGTCCCCATGGGAGAAGCC +
Preference number: 2 (lower is better)
Translates to: GQEEENFAVTPSDKILEIKSRDF*VPMGEA
Trigger: GGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTT...AATCTCTAGGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTTCCTCTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp GCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAGTCAGTTCCAGTTCGCTGTCTGTATGGTaGGAAGATCCTCAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: ALTRNTQLSKVKPLVSSSSLSVW*EDPQSS
Trigger: GCTGCTTTGAGGATCTTCCCACCATACAGACAGCGA...ACTGGAACTGACTAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CCA 90 bp CTGAAACTCCCGATAGAAGGTCCCCAGGTCCATCGGAAGAATGTCATCTTTAGAAGGAGATTCAGTCTCTaGGGAATCTGGAGGATTCAC +
Preference number: 2 (lower is better)
Translates to: LKLPIEGPQVHRKNVIFRRRFSL*GIWRIH
Trigger: GTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCT...TCTAAAGATGACATTCTTCCGATGGACCTGGGGACCTTCTATCGGGAGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
3UTR-3UTR CCA 90 bp AGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCTGTTTCATAGCAAGGCAATGGTTTATAGTCTGTaGGGGATTAGTGACTCTGGC +
Preference number: 2 (lower is better)
Translates to: RRFSLWGIWRIHLFHSKAMVYSL*GISDSG
Trigger: GCCAGAGTCACTAATCCCCCACAGACTATAAACCAT...TGCCTTGCTATGAAACAGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529395.1
3UTR-3UTR TCA 90 bp ATTCTCCAACTGAATATTCAAATTCAAGCCCCTGATAGGGGACCAGGGAAAGAGTCATACGCCCAGCTTTaGTTTCTCAACCAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: ILQLNIQIQAPDRGPGKESYAQL*FLNQKP
Trigger: TGGCTTCTGGTTGAGAAATCAAAGCTGGGCGTATGA...CTCTTTCCCTGGTCCCCTATCAGGGGCTTGAATTTGAATATTCAGTTGGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359513.8
3UTR-3UTR GCA 90 bp GGACAAGAGGAAGAGAACTTTGCTGTGACTCCAAGTGACAAAATCCTAGAGATTTCTCCTTCCTCTTTCTaGGACTCCACACCAATCTCT +
Preference number: 2 (lower is better)
Translates to: GQEEENFAVTPSDKILEISPSSF*DSTPIS
Trigger: AGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA...AATCTCTAGGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTTCCTCTTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR GCA 72 bp GGAGCTGAGGACCTGAGCACAGGCAGCCACCAGGGCTaGTCAGACCCTCCCGACCTTCAGGGGTGGGAGTGG +
Preference number: 3 (lower is better)
Translates to: GAEDLSTGSHQG*SDPPDLQGWEW
Trigger: CCACTCCCACCCCTGAAGGTCGGGAGGGTCTGAGCAGCCCTGGTGGCTGCCTGTGCTCAGGTCCTCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR TCA 72 bp CCAGCACGTGAGTCTTCTCCAACTGGGCACTGGGCTTaGCTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAG +
Preference number: 3 (lower is better)
Translates to: PARESSPTGHWA*LPPRSLQEVQE
Trigger: CTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR GCA 72 bp CACTGCTGCCCCCGCTGGAGCCATCTGAGTGCAGGCTaGCCTGGAGAGGAGATTCAGTCTCTGGGGAATCTG +
Preference number: 3 (lower is better)
Translates to: HCCPRWSHLSAG*PGEEIQSLGNL
Trigger: CAGATTCCCCAGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
3UTR CCA 72 bp CCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATaGGAGAAGCCAGCCTCCCTTCCACCTGGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: PGGPRVGTSGSP*EKPASLPPGSE
Trigger: CTCTGAGCCAGGTGGAAGGGAGGCTGGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR CCA 72 bp CACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTaGGTCCCCATGGGAGAAGCCAGCCTCCCTTCCACC +
Preference number: 3 (lower is better)
Translates to: HGVSRRSKSRDF*VPMGEASLPST
Trigger: GGTGGAAGGGAGGCTGGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR GCA 72 bp GCAGCAGCACGCAGAGCTCTGGTCCCCGCCAGAGCCTaGTCCAATCCTCAGAAGTCAGCCTTGTATGTGGGA +
Preference number: 3 (lower is better)
Translates to: AAARRALVPARA*SNPQKSALYVG
Trigger: TCCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGAGCTCTGCGTGCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 72 bp GGCCAGTTGGCTGCTACTGCTTCTGCTAACACTTCTTaGTGGCAGCAGCAGCACGCAGAGCTCTGGTCCCCG +
Preference number: 3 (lower is better)
Translates to: GQLAATASANTS*WQQQHAELWSP
Trigger: CGGGGACCAGAGCTCTGCGTGCTGCTGCTGCCACCAAGAAGTGTTAGCAGAAGCAGTAGCAGCCAACTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CAA 90 bp GGCCTTGGGGATAAACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCGGCCAGCCCTCTTCTaGGATCTCGCTGTCTGTATG +
Preference number: 3 (lower is better)
Translates to: GLGDKPEPGFSKPRMCSGRPALF*DLAVCM
Trigger: CATACAGACAGCGAGATCCAAGAAGAGGGCTGGCCG...CCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTTTATCCCCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR TCA 72 bp GAACCACCTGCTCCACTGAAGCACAGCTGCTGCCAGTaGATGCCCCAGGTGGGCCAGGAGGAATGGAGTAGA +
Preference number: 3 (lower is better)
Translates to: EPPAPLKHSCCQ*MPQVGQEEWSR
Trigger: TCTACTCCATTCCTCCTGGCCCACCTGGGGCATTCACTGGCAGCAGCTGTGCTTCAGTGGAGCAGGTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR GCA 72 bp AGACAAACAGCTGGTCCCAGCCTGTCCCGGGGGTGCTaGAGGAGTCAGTCTAGGGCTCATTCCTTTCATGGC +
Preference number: 3 (lower is better)
Translates to: RQTAGPSLSRGC*RSQSRAHSFHG
Trigger: GCCATGAAAGGAATGAGCCCTAGACTGACTCCTGCAGCACCCCCGGGACAGGCTGGGACCAGCTGTTTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 72 bp AACACTTCTTGGTGGCAGCAGCAGCACGCAGAGCTCTaGTCCCCGCCAGAGCCTGCTCCAATCCTCAGAAGT +
Preference number: 3 (lower is better)
Translates to: NTSWWQQQHAEL*SPPEPAPILRS
Trigger: ACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGAGCTCTGCGTGCTGCTGCTGCCACCAAGAAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CAA 90 bp ACTGTCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAACTGGGCACTGGGCTaGACTGCCGCCACGGAGTCT +
Preference number: 3 (lower is better)
Translates to: TVSFLFLRLHTNLLATSWNWALG*TAATES
Trigger: AGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTT...CCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGACAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR GCA 72 bp TGGAGACAAACAGCTGGTCCCAGCCTGTCCCGGGGGTaGTGCAGGAGTCAGTCTAGGGCTCATTCCTTTCAT +
Preference number: 3 (lower is better)
Translates to: WRQTAGPSLSRG*CRSQSRAHSFH
Trigger: ATGAAAGGAATGAGCCCTAGACTGACTCCTGCAGCACCCCCGGGACAGGCTGGGACCAGCTGTTTGTCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 72 bp CCCGGCCAGCCCTCTTCTTGGATCTCGCTGTCTGTATaGTGGGAAGATCCTCAAAGCAGCAGCCCGGATTCT +
Preference number: 3 (lower is better)
Translates to: PGQPSSWISLSV*WEDPQSSSPDS
Trigger: AGAATCCGGGCTGCTGCTTTGAGGATCTTCCCACCATACAGACAGCGAGATCCAAGAAGAGGGCTGGCCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CAA 90 bp CTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGAACTGGGCACTGGGCTaGACTGCCGCCACGGAGTCT +
Preference number: 3 (lower is better)
Translates to: LSATPHQSLGHQLECQTVNWALG*TAATES
Trigger: AGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTT...CACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
3UTR-3UTR CAA 90 bp AAAAGCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGCTCCACACCAATCTCTaGGCCACCAGCTGGAATGTC +
Preference number: 3 (lower is better)
Translates to: KSSTGQPQGSGTSTQAVGLHTNL*ATSWNV
Trigger: GACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAG...CCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CAA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCTTTGGAGTTCTGATCTaGGGTAGGCAGGCCTGTCAT +
Preference number: 3 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSFGVLI*GRQACH
Trigger: ATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAA...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR TCA 72 bp CAGTTGGTGATGGGCAGGGCACACAGATGGCCCTGCTaGGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCC +
Preference number: 3 (lower is better)
Translates to: QLVMGRAHRWPC*GLFRTKVLPIS
Trigger: GGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATCTGTGTGCCCTGCCCATCACCAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
3UTR TCA 72 bp GTGGGCCAGGAGGAATGGAGTAGACCTAGATCTCCTTaGCCAGGACTACCAGCGAGGCTGGGAAAGGACAGA +
Preference number: 3 (lower is better)
Translates to: VGQEEWSRPRSP*PGLPARLGKDR
Trigger: TCTGTCCTTTCCCAGCCTCGCTGGTAGTCCTGGTCAAGGAGATCTAGGTCTACTCCATTCCTCCTGGCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 72 bp GACCTAGATCTCCTTGACCAGGACTACCAGCGAGGCTaGGAAAGGACAGATCATAGGTGGGTGAGGCTAGGC +
Preference number: 3 (lower is better)
Translates to: DLDLLDQDYQRG*ERTDHRWVRLG
Trigger: GCCTAGCCTCACCCACCTATGATCTGTCCTTTCCCAGCCTCGCTGGTAGTCCTGGTCAAGGAGATCTAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CAA 90 bp TGCTGCAGGAGTCAGTCTAGGGCTCATTCCTTTCATGGCAGGTCTGAGGGGCAACTCCACACCAATCTCTaGGCCACCAGCTGGAATGTC +
Preference number: 3 (lower is better)
Translates to: CCRSQSRAHSFHGRSEGQLHTNL*ATSWNV
Trigger: GACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAG...TTGCCCCTCAGACCTGCCATGAAAGGAATGAGCCCTAGACTGACTCCTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR-3UTR CAA 90 bp CACCCGACTCAAAACAGGCTTGCCCAGACACTTGAGGTCTTTCTGCGCTTCACAAGTCAGGAGGGCCAGTaGGCTGCTACTGCTTCTGCT +
Preference number: 3 (lower is better)
Translates to: HPTQNRLAQTLEVFLRFTSQEGQ*AATASA
Trigger: AGCAGAAGCAGTAGCAGCCAACTGGCCCTCCTGACT...TGTGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGCCTGTTTTGAGTCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359513.8
3UTR GCA 72 bp GGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTaGAGAAACTGTGGGAGATGTAAGGCTCTCACCAGG +
Preference number: 3 (lower is better)
Translates to: GLPGLPEWSQSL*RNCGRCKALTR
Trigger: CCTGGTGAGAGCCTTACATCTCCCACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR TCA 72 bp TCCCGACCTTCAGGGGTGGGAGTGGTTTTGGAGTTCTaGTCTTGGGTAGGCAGGCCTGTCATATTGCCAGAA +
Preference number: 3 (lower is better)
Translates to: SRPSGVGVVLEF*SWVGRPVILPE
Trigger: TTCTGGCAATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCTGAAGGTCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
3UTR GCA 72 bp GTGGCCATCACATTTAGCACCCAGGACTTCCTGGGCTaGCAGAATGGAGTCAGTCACTCTGCAGAAACTGTG +
Preference number: 3 (lower is better)
Translates to: VAITFSTQDFLG*QNGVSHSAETV
Trigger: CACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTGCTAAATGTGATGGCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR GCA 72 bp CTCAAAACAGGCTTGCCCAGACACTTGAGGTCTTTCTaGGCTTCACAACGCACCACTCTCCCCTTTCCCAGA +
Preference number: 3 (lower is better)
Translates to: LKTGLPRHLRSF*ASQRTTLPFPR
Trigger: TCTGGGAAAGGGGAGAGTGGTGCGTTGTGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGCCTGTTTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359513.8
3UTR CCA 72 bp TTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTaGAATGTCAAACAGTGGATGGTGACAGCAGGCAGG +
Preference number: 3 (lower is better)
Translates to: FLRLHTNLLATS*NVKQWMVTAGR
Trigger: CCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
3UTR CCA 72 bp TGGGGGACACACACAACATCCCCTAACCACTACATGTaGCCATCACATTTAGCACCCAGGACTTCCTGGGCT +
Preference number: 3 (lower is better)
Translates to: WGTHTTSPNHYM*PSHLAPRTSWA
Trigger: AGCCCAGGAAGTCCTGGGTGCTAAATGTGATGGCCACATGTAGTGGTTAGGGGATGTTGTGTGTGTCCCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 72 bp TGCTCCAATATCTATGGAGAGGCTGCTCAGCTGAGGTaGGTTCTGAAACTCCCGATAGAAGGTCCCCAGGTC +
Preference number: 3 (lower is better)
Translates to: CSNIYGEAAQLR*VLKLPIEGPQV
Trigger: GACCTGGGGACCTTCTATCGGGAGTTTCAGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATATTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
3UTR GCA 72 bp CACATGCAGTATACTAACAAGCAGCTGAGAACCACCTaGTCCACTGAAGCACAGCTGCTGCCAGTGAATGCC +
Preference number: 3 (lower is better)
Translates to: HMQYTNKQLRTT*STEAQLLPVNA
Trigger: GGCATTCACTGGCAGCAGCTGTGCTTCAGTGGAGCAGGTGGTTCTCAGCTGCTTGTTAGTATACTGCATGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR GCA 72 bp CAGCCATGGACTGTGCTCCAATATCTATGGAGAGGCTaGTCAGCTGAGGTGGGTTCTGAAACTCCCGATAGA +
Preference number: 3 (lower is better)
Translates to: QPWTVLQYLWRG*SAEVGSETPDR
Trigger: TCTATCGGGAGTTTCAGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATATTGGAGCACAGTCCATGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529395.1
3UTR CCA 72 bp TCACCCGTAAGCCGAGGGGCCATGGTTTATAGTCTGTaGGGGATTAGTGACTCTGGCTCAGGAAGAACAATG +
Preference number: 3 (lower is better)
Translates to: SPVSRGAMVYSL*GISDSGSGRTM
Trigger: CATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACTATAAACCATGGCCCCTCGGCTTACGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532067.1
3UTR CCA 72 bp AAACCCGTAAGCCGAGGGGCCATGGTTTATAGTCTGTaGGGGATTAGTGACTCTGGCTCAGGAAGAACAATG +
Preference number: 3 (lower is better)
Translates to: KPVSRGAMVYSL*GISDSGSGRTM
Trigger: CATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACTATAAACCATGGCCCCTCGGCTTACGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529395.1
3UTR TCA 72 bp CCTTTCCATGCAAGGCCTTGGAAAGAGAGCAGTAGCTaGAATATGGGGGCATCAATAACTTACCAGGGGCCT +
Preference number: 3 (lower is better)
Translates to: PFHARPWKESSS*NMGASITYQGP
Trigger: AGGCCCCTGGTAAGTTATTGATGCCCCCATATTTCAGCTACTGCTCTCTTTCCAAGGCCTTGCATGGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CCA 72 bp GAGCCTGCTCCAATCCTCAGAAGTCAGCCTTGTATGTaGGAACAGTGTCACATGCAGTATACTAACAAGCAG +
Preference number: 3 (lower is better)
Translates to: EPAPILRSQPCM*EQCHMQYTNKQ
Trigger: CTGCTTGTTAGTATACTGCATGTGACACTGTTCCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR TCA 72 bp GGGACAAGAGGAAGAGAACTTTGCTGTGACTCCAAGTaGCAAAATCCTAGAGATTCAGGGTGCCATTTTTAT +
Preference number: 3 (lower is better)
Translates to: GTRGRELCCDSK*QNPRDSGCHFY
Trigger: ATAAAAATGGCACCCTGAATCTCTAGGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTTCCTCTTGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR TCA 72 bp GAAAGGACAGATCATAGGTGGGTGAGGCTAGGCACTTaGCTTATTCAAGTAACAATACCTGAAGGGTTAAGT +
Preference number: 3 (lower is better)
Translates to: ERTDHRWVRLGT*LIQVTIPEGLS
Trigger: ACTTAACCCTTCAGGTATTGTTACTTGAATAAGTCAAGTGCCTAGCCTCACCCACCTATGATCTGTCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR TCA 72 bp GAGGCTAGGCACTTGACTTATTCAAGTAACAATACCTaGAGGGTTAAGTCAATCATACGCCCAGCTTTGATT +
Preference number: 3 (lower is better)
Translates to: EARHLTYSSNNT*RVKSIIRPALI
Trigger: AATCAAAGCTGGGCGTATGATTGACTTAACCCTTCAGGTATTGTTACTTGAATAAGTCAAGTGCCTAGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAGCCGCGCCTCCTGGCTaGGGGTTCCGCGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPAAPPG*GFRAPE
Trigger: CTCCGGAGCGCGGAACCCTCAGCCAGGAGGCGCGGC...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCGCCGCGCCTCCTGGCTaGGGGTTCCGCGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSAAPPG*GFRAPE
Trigger: CTCCGGAGCGCGGAACCCTCAGCCAGGAGGCGCGGC...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCACGGAGGCCGGGACCTaGGACCGACCAGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSTEAGT*DRPAAP
Trigger: AGGCGCGGCTGGTCGGTCCCAGGTCCCGGCCTCCGT...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCACCAGCCGCGCCTCCTaGCTGAGGGTTCCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSTSRAS*LRVPRS
Trigger: GGAGCGCGGAACCCTCAGCCAGGAGGCGCGGCTGGT...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGCCCGCTGGAGCCATCTaGGTGCAGGCTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWPAGAI*VQAALE
Trigger: CTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGG...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACGGCAGCCACCAGGGCTaGTCAGACCCTCCCGACCTT +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHGSHQG*SDPPDL
Trigger: AAGGTCGGGAGGGTCTGAGCAGCCCTGGTGGCTGCC...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCACCAGCCGCGCCTCCTaGCTGAGGGTTCCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPTSRAS*LRVPRS
Trigger: GGAGCGCGGAACCCTCAGCCAGGAGGCGCGGCTGGT...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCACTGCTGCCCCCGCTaGAGCCATCTGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHHCCPR*SHLSAG
Trigger: GCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCGCTCCGGAGCTGCAGTaGCCGTACACGTCGCCGATA +
Preference number: 4 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPAPELQ*PYTSPI
Trigger: TATCGGCGACGTGTACGGTCACTGCAGCTCCGGAGC...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCGCCGCGCCTCCTGGCTaGGGGTTCCGCGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGAAPPG*GFRAPE
Trigger: CTCCGGAGCGCGGAACCCTCAGCCAGGAGGCGCGGC...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp ACTGTCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGGCCGCGCCTCCTGGCTaGGGGTTCCGCGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: TVSFLFLRLHTNLLATSWAAPPG*GFRAPE
Trigger: CTCCGGAGCGCGGAACCCTCAGCCAGGAGGCGCGGC...CCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGACAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCGTCTCCAAGACATCGTaGGGGGAGGCCCGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPVSKTS*GEARPS
Trigger: TGAGGGACGGGCCTCCCCTCACGATGTCTTGGAGAC...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGGTCTCCAAGACATCGTaGGGGGAGGCCCGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKVSKTS*GEARPS
Trigger: TGAGGGACGGGCCTCCCCTCACGATGTCTTGGAGAC...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCCCCGCTGGAGCCATCTaGGTGCAGGCTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSPAGAI*VQAALE
Trigger: CTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGG...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGACACTGGGCACTGGGCTTaGCTGCCGCCACGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: APQDSPRDQEQVPRQLGDTGHWA*LPPRSL
Trigger: GAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGT...GTCCCCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGTCCGCGCTCCGGAGCTaGAGTGACCGTACACGTCGC +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWSALRS*SDRTRR
Trigger: GCGACGTGTACGGTCACTGCAGCTCCGGAGCGCGGA...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGCCTGTCCCGGGGGTaGTGCAGGAGTCAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKSLSRG*CRSQSR
Trigger: CCTAGACTGACTCCTGCAGCACCCCCGGGACAGGCT...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCGCACCCACGTCGACTaGCGCTCTTCAGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHRTHVD*RSSVLP
Trigger: GGGAAGCACTGAAGAGCGCCAGTCGACGTGGGTGCG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGGCTTCAGAAGGGTCCTaGCTCGCAGGCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKASEGS*LAGPRR
Trigger: ACGTCTGGGGCCTGCGAGCCAGGACCCTTCTGAAGC...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGCACTGCTGCCCCCGCTaGAGCCATCTGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEHCCPR*SHLSAG
Trigger: GCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTG...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCATTCCCAGACCTGCACTaGGGCAGGGGTGGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPFPDLH*GRGGEG
Trigger: CCCTTCCCCACCCCTGCCCCAGTGCAGGTCTGGGAA...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGGCCAGTCCTGCCATaGGGACCCTCAGGGTGTCCG +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPRPVLP*GPSGCP
Trigger: CGGACACCCTGAGGGTCCCCATGGCAGGACTGGCCT...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528494.5
CDS-3UTR TCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGATAAGCCAGGTCAGCTaGTCCAACGCCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKISQVS*SNAQGS
Trigger: GCTGCCCTGGGCGTTGGATCAGCTGACCTGGCTTAT...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000526508.5
ENST00000528494.5
CDS-3UTR TCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCACTGGGCACTGGGCTTaGCTGCCGCCACGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPTGHWA*LPPRSL
Trigger: GAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGT...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCACTGGGCACTGGGCTTaGCTGCCGCCACGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGATGHWA*LPPRSL
Trigger: GAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGT...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR TCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCCACAGCTGCTGCCAGTaGATGCCCCAGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPHSCCQ*MPQVGQ
Trigger: CTGGCCCACCTGGGGCATTCACTGGCAGCAGCTGTG...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGCAGATGGAGCCCTGGTaGAAGGCTGCTGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKQMEPW*KAAATC
Trigger: ACAGGTGGCAGCAGCCTTTCACCAGGGCTCCATCTG...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCTCCGCGCTCCGGAGCTaGAGTGACCGTACACGTCGC +
Preference number: 4 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSSALRS*SDRTRR
Trigger: GCGACGTGTACGGTCACTGCAGCTCCGGAGCGCGGA...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTCCGCGCTCCGGAGCTaGAGTGACCGTACACGTCGC +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPSALRS*SDRTRR
Trigger: GCGACGTGTACGGTCACTGCAGCTCCGGAGCGCGGA...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGACCATGGACCTCCCGACTaGAGGCAGCTGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: APQDSPRDQEQVPRQLGDHGPPD*RQLSCQ
Trigger: CTGGCAGGACAGCTGCCTGCAGTCGGGAGGTCCATG...GTCCCCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCCATGGACCTCCCGACTaGAGGCAGCTGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSHGPPD*RQLSCQ
Trigger: CTGGCAGGACAGCTGCCTGCAGTCGGGAGGTCCATG...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGCATGGACCTCCCGACTaGAGGCAGCTGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWHGPPD*RQLSCQ
Trigger: CTGGCAGGACAGCTGCCTGCAGTCGGGAGGTCCATG...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCTGGAGCCATCTGAGTaGAGGCTGCCCTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHLEPSE*RLPWRG
Trigger: TCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CACTGGGAGGTGACTTTGCCCCCGGCCAGCCCTCTTCTTGGATCTCGCTGTCTGGGGTATTGCCACTGCTaGCCCCGCTGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: HWEVTLPPASPLLGSRCLGYCHC*PRWSHL
Trigger: CAGATGGCTCCAGCGGGGGCAGCAGTGGCAATACCC...CAGACAGCGAGATCCAAGAAGAGGGCTGGCCGGGGGCAAAGTCACCTCCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGGGGTATTGCCACTGCTaGCCCCGCTGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEGYCHC*PRWSHL
Trigger: CAGATGGCTCCAGCGGGGGCAGCAGTGGCAATACCC...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCGCTGCTGCCAGTGAATaGCCCAGGTGGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPAAASE*PRWARR
Trigger: CCTCCTGGCCCACCTGGGGCATTCACTGGCAGCAGC...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAGCTTCAGAAGGGTCCTaGCTCGCAGGCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPASEGS*LAGPRR
Trigger: ACGTCTGGGGCCTGCGAGCCAGGACCCTTCTGAAGC...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAACGGAGGCCGGGACCTaGGACCGACCAGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPTEAGT*DRPAAP
Trigger: AGGCGCGGCTGGTCGGTCCCAGGTCCCGGCCTCCGT...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACGGAGGCCGGGACCTaGGACCGACCAGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGTEAGT*DRPAAP
Trigger: AGGCGCGGCTGGTCGGTCCCAGGTCCCGGCCTCCGT...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGCCAGTGCAGCCACACTaGGAGGTGACTTTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEPVQPH*EVTLPP
Trigger: CGGGGGCAAAGTCACCTCCCAGTGTGGCTGCACTGG...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCGCCGCGCCTCCTGGCTaGGGGTTCCGCGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLAAPPG*GFRAPE
Trigger: CTCCGGAGCGCGGAACCCTCAGCCAGGAGGCGCGGC...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCGTCTCCAAGACATCGTaGGGGGAGGCCCGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSVSKTS*GEARPS
Trigger: TGAGGGACGGGCCTCCCCTCACGATGTCTTGGAGAC...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACCCCGCTGGAGCCATCTaGGTGCAGGCTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHPAGAI*VQAALE
Trigger: CTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGG...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp GGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCCGTAAGCCGAGGGGCCATCCCGCTGGAGCCATCTaGGTGCAGGCTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GDSVSGESGGFTRKPRGHPAGAI*VQAALE
Trigger: CTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGG...ATGGCCCCTCGGCTTACGGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532067.1
CDS-3UTR TCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGAGGGGTGGGAGCAGCTaGTGCATGGGAGGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWRGGSS*CMGGCL
Trigger: TAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCT...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCACTGGAGCCATCTGAGTaGAGGCTGCCCTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPLEPSE*RLPWRG
Trigger: TCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAG...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGCTGGAGCCATCTGAGTaGAGGCTGCCCTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWLEPSE*RLPWRG
Trigger: TCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAG...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCACATGGGTATTGCCACTaGTGCCCCCGCTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPHGYCH*CPRWSH
Trigger: ATGGCTCCAGCGGGGGCAGCAGTGGCAATACCCATG...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTCATCATGGGTATTaGCACTGCTGCCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKSHHGY*HCCPRW
Trigger: CCAGCGGGGGCAGCAGTGGCAATACCCATGATGACT...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCGCTTCAGAAGGGTCCTaGCTCGCAGGCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPASEGS*LAGPRR
Trigger: ACGTCTGGGGCCTGCGAGCCAGGACCCTTCTGAAGC...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACCAGCCGCGCCTCCTaGCTGAGGGTTCCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGTSRAS*LRVPRS
Trigger: GGAGCGCGGAACCCTCAGCCAGGAGGCGCGGCTGGT...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTACCAGCCGCGCCTCCTaGCTGAGGGTTCCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTTSRAS*LRVPRS
Trigger: GGAGCGCGGAACCCTCAGCCAGGAGGCGCGGCTGGT...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTACGGAGGCCGGGACCTaGGACCGACCAGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSTEAGT*DRPAAP
Trigger: AGGCGCGGCTGGTCGGTCCCAGGTCCCGGCCTCCGT...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACGCATGGGAGAGGAGCTaGGATAGGGACGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHAWERS*DRDGPQ
Trigger: TTGTGGACCGTCCCTATCCCAGCTCCTCTCCCATGC...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCACATGGACAGGCTGGTTaGGAGCAAGGGGTACCCCAC +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPHGQAG*EQGVPH
Trigger: GTGGGGTACCCCTTGCTCCCAACCAGCCTGTCCATG...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACGTACCATGGACAGGCTaGTTGGGAGCAAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHVPWTG*LGARGT
Trigger: GGTACCCCTTGCTCCCAACCAGCCTGTCCATGGTAC...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCTCAGCCTGGGTACCATaGACAGGCTGGTTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPSAWVP*TGWLGA
Trigger: TGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGA...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGCTCTCCTGGTCAGCCTaGGTACCATGGACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWLSWSA*VPWTGW
Trigger: CCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAG...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCACTCTCCTGGTCAGCCTaGGTACCATGGACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPLSWSA*VPWTGW
Trigger: CCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAG...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCCCAGTGCAGCCACACTaGGAGGTGACTTTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAPVQPH*EVTLPP
Trigger: CGGGGGCAAAGTCACCTCCCAGTGTGGCTGCACTGG...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCCTGGAGACAAACAGCTaGTCCCAGCCTGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGALETNS*SQPVPG
Trigger: CCCCGGGACAGGCTGGGACCAGCTGTTTGTCTCCAG...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGCCAGGAACCATCAGCTaGGATGGTGGGGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKPGTIS*DGGEVE
Trigger: TTCCACCTCCCCACCATCCCAGCTGATGGTTCCTGG...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000524625.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp CAGGAAGTAAAGGGGACAATGAAGAGAGCTAAGGGACTCCTTCCTTCTTCCTCCGCCGCGCCTCCTGGCTaGGGGTTCCGCGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: QEVKGTMKRAKGLLPSSSAAPPG*GFRAPE
Trigger: CTCCGGAGCGCGGAACCCTCAGCCAGGAGGCGCGGC...GGAGGAAGAAGGAAGGAGTCCCTTAGCTCTCTTCATTGTCCCCTTTACTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCAGGGGTGGGAGCAGCTaGTGCATGGGAGGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPRGGSS*CMGGCL
Trigger: TAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCT...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGACTCCAAGGCCAGCACGTaGGTCTTCTCCAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: APQDSPRDQEQVPRQLGDSKAST*VFSNWA
Trigger: TGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGA...GTCCCCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCTCCAAGGCCAGCACGTaGGTCTTCTCCAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSSKAST*VFSNWA
Trigger: TGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGA...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGTCCAAGGCCAGCACGTaGGTCTTCTCCAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWSKAST*VFSNWA
Trigger: TGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGA...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCATCCAAGGCCAGCACGTaGGTCTTCTCCAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPSKAST*VFSNWA
Trigger: TGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGA...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCCACAGATGGCCCTGCTaGGGGCTTTTTCGTACGAAG +
Preference number: 4 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPHRWPC*GLFRTK
Trigger: CTTCGTACGAAAAAGCCCTCAGCAGGGCCATCTGTG...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGTCAAACAGTGGATGGTaGCAGCAGGCAGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWSNSGW*QQAGKG
Trigger: CCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGA...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGACGAGGAGGAGGGACTCTaGCACCTGGAGACAAACAGC +
Preference number: 4 (lower is better)
Translates to: APQDSPRDQEQVPRQLGDEEEGL*HLETNS
Trigger: GCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTC...GTCCCCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CACTGGGAGGTGACTTTGCCCCCGGCCAGCCCTCTTCTTGGATCTCGCTGTCTGAGAAGGGGTGCAGGTTaGCAGTCTCTCCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: HWEVTLPPASPLLGSRCLRRGAG*QSLLVS
Trigger: GCTGACCAGGAGAGACTGGCAACCTGCACCCCTTCT...CAGACAGCGAGATCCAAGAAGAGGGCTGGCCGGGGGCAAAGTCACCTCCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGAGAAGGGGTGCAGGTTaGCAGTCTCTCCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWERRGAG*QSLLVS
Trigger: GCTGACCAGGAGAGACTGGCAACCTGCACCCCTTCT...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCATGGGTATTGCCACTaGTGCCCCCGCTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSHGYCH*CPRWSH
Trigger: ATGGCTCCAGCGGGGGCAGCAGTGGCAATACCCATG...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACATGGGAGGCTGCTTATaGCCTGGGGCCACAAAAAGG +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHMGGCL*PGATKR
Trigger: CCTTTTTGTGGCCCCAGGGCATAAGCAGCCTCCCAT...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGATGGGAGGCTGCTTATaGCCTGGGGCCACAAAAAGG +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKMGGCL*PGATKR
Trigger: CCTTTTTGTGGCCCCAGGGCATAAGCAGCCTCCCAT...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGCAGGACTTCCTGGGCTaGCAGAATGGAGTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKQDFLG*QNGVSH
Trigger: GTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTG...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGCAAGCCACGCATGTaGTCTGGGCCAAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKSKPRM*SGPKSG
Trigger: TCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCT...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACGACAGTCTGCGAAGCTaGGGCACAAAGAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHDSLRS*GTKSGS
Trigger: GGAACCACTCTTTGTGCCGCAGCTTCGCAGACTGTC...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000530500.5
CDS-3UTR CCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGCAGTGCTTCCCTCACTaGTTAAGCGGTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWQCFPH*LSGHSR
Trigger: GCGGGAGTGACCGCTTAACCAGTGAGGGAAGCACTG...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGACCAGTGCTTCCCTCACTaGTTAAGCGGTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: APQDSPRDQEQVPRQLGDQCFPH*LSGHSR
Trigger: GCGGGAGTGACCGCTTAACCAGTGAGGGAAGCACTG...GTCCCCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGACCAGCCGCGCCTCCTaGCTGAGGGTTCCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMTSRAS*LRVPRS
Trigger: GGAGCGCGGAACCCTCAGCCAGGAGGCGCGGCTGGT...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTACGGAGGCCGGGACCTaGGACCGACCAGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: RGGSGFGVLILGRQACHITEAGT*DRPAAP
Trigger: AGGCGCGGCTGGTCGGTCCCAGGTCCCGGCCTCCGT...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCACGGAGGCCGGGACCTaGGACCGACCAGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLTEAGT*DRPAAP
Trigger: AGGCGCGGCTGGTCGGTCCCAGGTCCCGGCCTCCGT...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCCTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACG +
Preference number: 4 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPLRHKE*FRALIT
Trigger: CGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAG...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCGCATGGGAGAGGAGCTaGGATAGGGACGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSAWERS*DRDGPQ
Trigger: TTGTGGACCGTCCCTATCCCAGCTCCTCTCCCATGC...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCCATGGACAGGCTGGTTaGGAGCAAGGGGTACCCCAC +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAHGQAG*EQGVPH
Trigger: GTGGGGTACCCCTTGCTCCCAACCAGCCTGTCCATG...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCATGGACAGGCTGGTTaGGAGCAAGGGGTACCCCAC +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSHGQAG*EQGVPH
Trigger: GTGGGGTACCCCTTGCTCCCAACCAGCCTGTCCATG...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGTACCATGGACAGGCTaGTTGGGAGCAAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWVPWTG*LGARGT
Trigger: GGTACCCCTTGCTCCCAACCAGCCTGTCCATGGTAC...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GGCCTTGGGGATAAACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCTCTCCTGGTCAGCCTaGGTACCATGGACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLGDKPEPGFSKPRMCSGLSWSA*VPWTGW
Trigger: CCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAG...CCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTTTATCCCCAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCACTACTGGAGGGTGTaGCAGCACAGTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHHYWRV*QHSGFC
Trigger: ACAGAACCCACTGTGCTGCCACACCCTCCAGTAGTG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCGAGTGCAGGCTGCCCTaGAGAGGAGATTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPECRLP*RGDSVS
Trigger: AGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTC...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACCACTGCTGCCCCCGCTaGAGCCATCTGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHHCCPR*SHLSAG
Trigger: GCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTG...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGAGGCTGCTTATGCCCTaGGGCCACAAAAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWRLLMP*GHKKGV
Trigger: CACCCCCTTTTTGTGGCCCCAGGGCATAAGCAGCCT...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGCTGCTTATGCCCTaGGGCCACAAAAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSRLLMP*GHKKGV
Trigger: CACCCCCTTTTTGTGGCCCCAGGGCATAAGCAGCCT...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCGGAGCAGCTGATGCATaGGAGGCTGCTTATGCCCTG +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSGAADA*EAAYAL
Trigger: CAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCC...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGAGCAGCTGATGCATaGGAGGCTGCTTATGCCCTG +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWGAADA*EAAYAL
Trigger: CAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCC...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGGCTAACACTTCTTGGTaGCAGCAGCAGCACGCAGAG +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKANTSW*QQQHAE
Trigger: CTCTGCGTGCTGCTGCTGCCACCAAGAAGTGTTAGC...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGGTCAGGAGGGCCAGTTaGCTGCTACTGCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKVRRAS*LLLLLL
Trigger: TAGCAGAAGCAGTAGCAGCCAACTGGCCCTCCTGAC...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCCCCCCTTCTCAAAGCTaGGGCCTTGGGGATAAACCT +
Preference number: 4 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPPPSQS*GLGDKP
Trigger: AGGTTTATCCCCAAGGCCCCAGCTTTGAGAAGGGGG...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
61% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACGTCTCCAAGACATCGTaGGGGGAGGCCCGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHVSKTS*GEARPS
Trigger: TGAGGGACGGGCCTCCCCTCACGATGTCTTGGAGAC...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCCCGCTGGAGCCATCTaGGTGCAGGCTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSPAGAI*VQAALE
Trigger: CTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGG...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGCCCGCTGGAGCCATCTaGGTGCAGGCTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMPAGAI*VQAALE
Trigger: CTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGG...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp TCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAACTGGGCACTGGGCTTaGCTGCCGCCACGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SLGHQLECQTVDGDSRQGTGHWA*LPPRSL
Trigger: GAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGT...TCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTACTGGGCACTGGGCTTaGCTGCCGCCACGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTTGHWA*LPPRSL
Trigger: GAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGT...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGCACAGATGGCCCTGCTaGGGGCTTTTTCGTACGAAG +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWHRWPC*GLFRTK
Trigger: CTTCGTACGAAAAAGCCCTCAGCAGGGCCATCTGTG...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGCACAGATGGCCCTGCTaGGGGCTTTTTCGTACGAAG +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEHRWPC*GLFRTK
Trigger: CTTCGTACGAAAAAGCCCTCAGCAGGGCCATCTGTG...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGCAGGAGGAACAGGATaGCACCCTTGGGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWAGGTG*HPWEAV
Trigger: AACTGCTTCCCAAGGGTGTCATCCTGTTCCTCCTGC...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCTCAAACAGTGGATGGTaGCAGCAGGCAGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGASNSGW*QQAGKG
Trigger: CCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGA...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR TCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGACCTAGATCTCCTTaGCCAGGACTACCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSRPRSP*PGLPAR
Trigger: CCTCGCTGGTAGTCCTGGTCAAGGAGATCTAGGTCT...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp TGCTGCAGGAGTCAGTCTAGGGCTCATTCCTTTCATGGCAGGTCTGAGGGGCAACACAGCTGCTGCCAGTaGATGCCCCAGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: CCRSQSRAHSFHGRSEGQHSCCQ*MPQVGQ
Trigger: CTGGCCCACCTGGGGCATTCACTGGCAGCAGCTGTG...TTGCCCCTCAGACCTGCCATGAAAGGAATGAGCCCTAGACTGACTCCTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCAACCACCTGCTCCACTaGAGCACAGCTGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPNHLLH*STAAAS
Trigger: ACTGGCAGCAGCTGTGCTTCAGTGGAGCAGGTGGTT...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCGAGGAGGAGGGACTCTaGCACCTGGAGACAAACAGC +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPEEEGL*HLETNS
Trigger: GCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTC...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCCGCGCTCCGGAGCTaGAGTGACCGTACACGTCGC +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPARESALRS*SDRTRR
Trigger: GCGACGTGTACGGTCACTGCAGCTCCGGAGCGCGGA...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGCATGGACCTCCCGACTaGAGGCAGCTGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRHGPPD*RQLSCQ
Trigger: CTGGCAGGACAGCTGCCTGCAGTCGGGAGGTCCATG...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACAGGCCCGTCCCTCACTaGTGTTTGATACGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHRPVPH*CLIRFQ
Trigger: CTGAAACCGTATCAAACAGCAGTGAGGGACGGGCCT...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACGGGTATTGCCACTGCTaGCCCCGCTGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHGYCHC*PRWSHL
Trigger: CAGATGGCTCCAGCGGGGGCAGCAGTGGCAATACCC...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGATGGGAGGCTGCTTATaGCCTGGGGCCACAAAAAGG +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEMGGCL*PGATKR
Trigger: CCTTTTTGTGGCCCCAGGGCATAAGCAGCCTCCCAT...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGATGGGAGGCTGCTTATaGCCTGGGGCCACAAAAAGG +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWMGGCL*PGATKR
Trigger: CCTTTTTGTGGCCCCAGGGCATAAGCAGCCTCCCAT...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp TCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAGGCAGCCACCAGGGCTaGTCAGACCCTCCCGACCTT +
Preference number: 4 (lower is better)
Translates to: SLGHQLECQTVDGDSRQGGSHQG*SDPPDL
Trigger: AAGGTCGGGAGGGTCTGAGCAGCCCTGGTGGCTGCC...TCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCGCTGCTGCCAGTGAATaGCCCAGGTGGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGAAASE*PRWARR
Trigger: CCTCCTGGCCCACCTGGGGCATTCACTGGCAGCAGC...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp AAAAGCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGCTGTCCCGGGGGTGCTaGAGGAGTCAGTCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: KSSTGQPQGSGTSTQAVGLSRGC*RSQSRA
Trigger: AGCCCTAGACTGACTCCTGCAGCACCCCCGGGACAG...CCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGCTTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CACTGGGAGGTGACTTTGCCCCCGGCCAGCCCTCTTCTTGGATCTCGCTGTCTGACAGTCACCCTCACCTaGGAAGCTGCGGCACAAAGA +
Preference number: 4 (lower is better)
Translates to: HWEVTLPPASPLLGSRCLTVTLT*EAAAQR
Trigger: TCTTTGTGCCGCAGCTTCGCAGGTGAGGGTGACTGT...CAGACAGCGAGATCCAAGAAGAGGGCTGGCCGGGGGCAAAGTCACCTCCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526508.5
CDS-3UTR CCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCCAGTGCTTCCCTCACTaGTTAAGCGGTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAQCFPH*LSGHSR
Trigger: GCGGGAGTGACCGCTTAACCAGTGAGGGAAGCACTG...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCAGTGCTTCCCTCACTaGTTAAGCGGTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSQCFPH*LSGHSR
Trigger: GCGGGAGTGACCGCTTAACCAGTGAGGGAAGCACTG...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCCTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACG +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSLRHKE*FRALIT
Trigger: CGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAG...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGCTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACG +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWELRHKE*FRALIT
Trigger: CGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAG...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCGCATGGGAGAGGAGCTaGGATAGGGACGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSAWERS*DRDGPQ
Trigger: TTGTGGACCGTCCCTATCCCAGCTCCTCTCCCATGC...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCGCATGGGAGAGGAGCTaGGATAGGGACGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPAWERS*DRDGPQ
Trigger: TTGTGGACCGTCCCTATCCCAGCTCCTCTCCCATGC...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCGTACCATGGACAGGCTaGTTGGGAGCAAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPVPWTG*LGARGT
Trigger: GGTACCCCTTGCTCCCAACCAGCCTGTCCATGGTAC...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCGGTGTGGCAGCACAGTaGGTTCTGTCAGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAGVAAQ*VLSEGV
Trigger: CACCCCTTCTGACAGAACCCACTGTGCTGCCACACC...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGCACTACTGGAGGGTGTaGCAGCACAGTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWHYWRV*QHSGFC
Trigger: ACAGAACCCACTGTGCTGCCACACCCTCCAGTAGTG...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGCACTACTGGAGGGTGTaGCAGCACAGTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWHYWRV*QHSGFC
Trigger: ACAGAACCCACTGTGCTGCCACACCCTCCAGTAGTG...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCCACTACTGGAGGGTGTaGCAGCACAGTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSHYWRV*QHSGFC
Trigger: ACAGAACCCACTGTGCTGCCACACCCTCCAGTAGTG...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGCAGTATCCTCACTACTaGAGGGTGTGGCAGCACAGT +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKQYPHY*RVWQHS
Trigger: ACTGTGCTGCCACACCCTCCAGTAGTGAGGATACTG...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGACGAGTGCAGGCTGCCCTaGAGAGGAGATTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: APQDSPRDQEQVPRQLGDECRLP*RGDSVS
Trigger: AGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTC...GTCCCCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGGAGTGCAGGCTGCCCTaGAGAGGAGATTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEECRLP*RGDSVS
Trigger: AGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTC...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CTGCCCTGGAGAGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCCGTAAGCACTGCTGCCCCCGCTaGAGCCATCTGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: LPWRGDSVSGESGGFTRKHCCPR*SHLSAG
Trigger: GCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTG...CTTACGGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCTCTCCAGGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532067.1
CDS-3UTR CCA 90 bp GGCCTTGGGGATAAACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGACTTCTGGGTCCCCATaGGAGAAGCCAGCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GLGDKPEPGFSKPRMCSGTSGSP*EKPASL
Trigger: AAGGGAGGCTGGCTTCTCCCATGGGGACCCAGAAGT...CCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTTTATCCCCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAAGAGTAGGGACTTCTaGGTCCCCATGGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPKSRDF*VPMGEA
Trigger: GGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTT...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGAAGAGTAGGGACTTCTaGGTCCCCATGGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWKSRDF*VPMGEA
Trigger: GGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTT...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCCCCGACCTTCAGGGGTaGGAGTGGTTTTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSPDLQG*EWFWSS
Trigger: AGAACTCCAAAACCACTCCCACCCCTGAAGGTCGGG...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCGTGGGCCAGGAGGAATaGAGTAGACCTAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPVGQEE*SRPRSP
Trigger: AGGAGATCTAGGTCTACTCCATTCCTCCTGGCCCAC...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGTGAATGCCCCAGGTaGGCCAGGAGGAATGGAGTA +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPSECPR*ARRNGV
Trigger: TACTCCATTCCTCCTGGCCCACCTGGGGCATTCACT...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAGTCAGGAGGGCCAGTTaGCTGCTACTGCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPVRRAS*LLLLLL
Trigger: TAGCAGAAGCAGTAGCAGCCAACTGGCCCTCCTGAC...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGACGTCAGGAGGGCCAGTTaGCTGCTACTGCTTCTGCTA +
Preference number: 4 (lower is better)
Translates to: APQDSPRDQEQVPRQLGDVRRAS*LLLLLL
Trigger: TAGCAGAAGCAGTAGCAGCCAACTGGCCCTCCTGAC...GTCCCCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGAGGGACTCTGACACCTaGAGACAAACAGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWERDSDT*RQTAGP
Trigger: GGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCT...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGCCTGGACAATCACTTaGACAGTCTGCGAAGCTGCG +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWAWTIT*TVCEAA
Trigger: CGCAGCTTCGCAGACTGTCCAAGTGATTGTCCAGGC...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530500.5
CDS-3UTR TCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCGCTCCGGAGCTGCAGTaGCCGTACACGTCGCCGATA +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGAPELQ*PYTSPI
Trigger: TATCGGCGACGTGTACGGTCACTGCAGCTCCGGAGC...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTGCTCCGGAGCTGCAGTaGCCGTACACGTCGCCGATA +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTAPELQ*PYTSPI
Trigger: TATCGGCGACGTGTACGGTCACTGCAGCTCCGGAGC...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACATAAGCCAGGTCAGCTaGTCCAACGCCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHISQVS*SNAQGS
Trigger: GCTGCCCTGGGCGTTGGATCAGCTGACCTGGCTTAT...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000526508.5
ENST00000528494.5
CDS-3UTR TCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGAGGGGTGGGAGCAGCTaGTGCATGGGAGGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRRGGSS*CMGGCL
Trigger: TAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCT...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR TCA 90 bp TCTGGTCCCCGCCAGAGCCTGCTCCAATCCTCAGAAGTCAGCCTTGTATGTGGGTCCAAGGCCAGCACGTaGGTCTTCTCCAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: SGPRQSLLQSSEVSLVCGSKAST*VFSNWA
Trigger: TGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGA...CCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCGCAGGAGGAACAGGATaGCACCCTTGGGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSAGGTG*HPWEAV
Trigger: AACTGCTTCCCAAGGGTGTCATCCTGTTCCTCCTGC...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCGCAGGAGGAACAGGATaGCACCCTTGGGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAAGGTG*HPWEAV
Trigger: AACTGCTTCCCAAGGGTGTCATCCTGTTCCTCCTGC...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGGTGGTTTTGGAGTTCTaGTCTTGGGTAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEVVLEF*SWVGRP
Trigger: AGGCCTGCCTACCCAAGATCAGAACTCCAAAACCAC...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCGCTTGCCCAGACACTTaGGGTCTTTCTGCGCTTCAC +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAACPDT*GLSALH
Trigger: GTGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGC...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR TCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCCGAGAGCTTGAGAGTTaGTGGGAAAAGGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSRELES*WEKASP
Trigger: AGGACTGGCCTTTTCCCATCAACTCTCAAGCTCTCG...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528494.5
CDS-3UTR GCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAACTGGCGCTCTTCAGTaGTTCCCTCACTGGTTAAGC +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPTGALQ*FPHWLS
Trigger: GCTTAACCAGTGAGGGAAGCACTGAAGAGCGCCAGT...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCAGCTGTCCTGCCAGTaGCTTCTTTGCTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHQLSCQ*LLCFMC
Trigger: ACACATGAAGCAAAGAAGGCACTGGCAGGACAGCTG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGCATGGACCTCCCGACTaGAGGCAGCTGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREHGPPD*RQLSCQ
Trigger: CTGGCAGGACAGCTGCCTGCAGTCGGGAGGTCCATG...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACTGGTGCCCACAGGGGTaGCCACTGTCCCAACACGAA +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHWCPQG*PLSQHE
Trigger: TTCGTGTTGGGACAGTGGGCACCCCTGTGGGCACCA...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTGGTGCCCACAGGGGTaGCCACTGTCCCAACACGAA +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHWCPQG*PLSQHE
Trigger: TTCGTGTTGGGACAGTGGGCACCCCTGTGGGCACCA...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGGGGGTCCTCTCAAATTaGCTGGTAGACATGAATGCC +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKGVLSN*LVDMNA
Trigger: GGCATTCATGTCTACCAGGCAATTTGAGAGGACCCC...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCCAGCAGTTCTGTAATTaGAGGGGTGCATGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSQQFCN*RGAWER
Trigger: CCTCTCCCATGCACCCCTGCAATTACAGAACTGCTG...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CACTGGGAGGTGACTTTGCCCCCGGCCAGCCCTCTTCTTGGATCTCGCTGTCTGCAGCAGTTCTGTAATTaGAGGGGTGCATGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HWEVTLPPASPLLGSRCLQQFCN*RGAWER
Trigger: CCTCTCCCATGCACCCCTGCAATTACAGAACTGCTG...CAGACAGCGAGATCCAAGAAGAGGGCTGGCCGGGGGCAAAGTCACCTCCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGCAGCAGTTCTGTAATTaGAGGGGTGCATGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWQQFCN*RGAWER
Trigger: CCTCTCCCATGCACCCCTGCAATTACAGAACTGCTG...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp AACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGAGAAGGGGTGCAGGTTaGCAGTCTCTCCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: NLSLGSASHACALGQSQERRGAG*QSLLVS
Trigger: GCTGACCAGGAGAGACTGGCAACCTGCACCCCTTCT...CTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCTTCTGTCAGAAGGGGTaGAGGTTGCCAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSFCQKG*RLPVSP
Trigger: AGGAGAGACTGGCAACCTGCACCCCTTCTGACAGAA...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CCCTGGAGAGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCCGTAAGCCGCTGGAGCCATCTGAGTaGAGGCTGCCCTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PWRGDSVSGESGGFTRKPLEPSE*RLPWRG
Trigger: TCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAG...CGGCTTACGGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCTCTCCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532067.1
CDS-3UTR GCA 90 bp CACCCAGGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGGGTATTGCCACTGCTaGCCCCGCTGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: HPGLPGLPEWSQSLCRNCGYCHC*PRWSHL
Trigger: CAGATGGCTCCAGCGGGGGCAGCAGTGGCAATACCC...ACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGGGTATTGCCACTGCTaGCCCCGCTGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPGYCHC*PRWSHL
Trigger: CAGATGGCTCCAGCGGGGGCAGCAGTGGCAATACCC...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp AACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGAGTCATCATGGGTATTaGCACTGCTGCCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: NLSLGSASHACALGQSQESHHGY*HCCPRW
Trigger: CCAGCGGGGGCAGCAGTGGCAATACCCATGATGACT...CTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACTATCTATGGAGAGGCTaGTCAGCTGAGGTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHYLWRG*SAEVGS
Trigger: AGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATA...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCATGGGAGGCTGCTTATaGCCTGGGGCCACAAAAAGG +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAMGGCL*PGATKR
Trigger: CCTTTTTGTGGCCCCAGGGCATAAGCAGCCTCCCAT...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR GCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGCTGCCACCTGTAGATaGCAAAGATTGCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWAATCR*QRLLPQ
Trigger: CTGAGGCAGCAATCTTTGGCATCTACAGGTGGCAGC...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCGTTCCACTGCGAAGCTaGGGCACAAAGAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSVPLRS*GTKSGS
Trigger: GGAACCACTCTTTGTGCCGCAGCTTCGCAGTGGAAC...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529655.5
CDS-3UTR GCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAAGATGCTGCGAAGCTaGGGCACAAAGAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSKMLRS*GTKSGS
Trigger: GGAACCACTCTTTGTGCCGCAGCTTCGCAGCATCTT...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524625.5
CDS-3UTR CCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCCGCACCCACGTCGACTaGCGCTCTTCAGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGRTHVD*RSSVLP
Trigger: GGGAAGCACTGAAGAGCGCCAGTCGACGTGGGTGCG...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGCGCACCCACGTCGACTaGCGCTCTTCAGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPARERTHVD*RSSVLP
Trigger: GGGAAGCACTGAAGAGCGCCAGTCGACGTGGGTGCG...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCGCTTCAGAAGGGTCCTaGCTCGCAGGCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGASEGS*LAGPRR
Trigger: ACGTCTGGGGCCTGCGAGCCAGGACCCTTCTGAAGC...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAAATCTCCACACACATaGACCTCCCGACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSKSPHT*TSRLQA
Trigger: TGCCTGCAGTCGGGAGGTCCATGTGTGTGGAGATTT...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGCATGCCCTTGTTTCCTaGAGAGCCTATAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWHALVS*RAYRLV
Trigger: CACCAGCCTATAGGCTCTCCAGGAAACAAGGGCATG...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAGGGATGGTGGGGAGGTaGAAAAAGAGGTGGTACACA +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPGMVGR*KKRWYT
Trigger: TGTGTACCACCTCTTTTTCCACCTCCCCACCATCCC...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCGGGATGGTGGGGAGGTaGAAAAAGAGGTGGTACACA +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSGMVGR*KKRWYT
Trigger: TGTGTACCACCTCTTTTTCCACCTCCCCACCATCCC...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp AACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGCGAGAGCTTGAGAGCTaGGATGGTGGGGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: NLSLGSASHACALGQSQERELES*DGGEVE
Trigger: TTCCACCTCCCCACCATCCCAGCTCTCAAGCTCTCG...CTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359513.8
ENST00000526508.5
CDS-3UTR CCA 90 bp AAAAGCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGCTCTCCTGGTCAGCCTaGGTACCATGGACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KSSTGQPQGSGTSTQAVGLSWSA*VPWTGW
Trigger: CCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAG...CCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCTGGTCCCCGCCAGAGCCTGCTCCAATCCTCAGAAGTCAGCCTTGTATGTGGGGGTGTGGCAGCACAGTaGGTTCTGTCAGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SGPRQSLLQSSEVSLVCGGVAAQ*VLSEGV
Trigger: CACCCCTTCTGACAGAACCCACTGTGCTGCCACACC...CCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGCAGTATCCTCACTACTaGAGGGTGTGGCAGCACAGT +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWQYPHY*RVWQHS
Trigger: ACTGTGCTGCCACACCCTCCAGTAGTGAGGATACTG...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCGAGTGCAGGCTGCCCTaGAGAGGAGATTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAECRLP*RGDSVS
Trigger: AGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTC...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGCTGCTCAGCTGAGGTaGGTTCTGAAACTCCCGATA +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWAAQLR*VLKLPI
Trigger: TATCGGGAGTTTCAGAACCCACCTCAGCTGAGCAGC...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCTCTTGGCCACCAGCTaGAATGTCAAACAGTGGATG +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHLLATS*NVKQWM
Trigger: CATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCGGCCAGCCCTCTTCTTaGATCTCGCTGTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPGQPSS*ISLSVW
Trigger: CCATACAGACAGCGAGATCCAAGAAGAGGGCTGGCC...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCCCTGGGCTGCCAGAATaGAGTCAGTCACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPPGLPE*SQSLCR
Trigger: TCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGG...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCCCTGGGCTGCCAGAATaGAGTCAGTCACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSPGLPE*SQSLCR
Trigger: TCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGG...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTGGGCCAGGAGGAATaGAGTAGACCTAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWVGQEE*SRPRSP
Trigger: AGGAGATCTAGGTCTACTCCATTCCTCCTGGCCCAC...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGTCTGCTAACACTTCTTaGTGGCAGCAGCAGCACGCA +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWESANTS*WQQQHA
Trigger: TGCGTGCTGCTGCTGCCACCAAGAAGTGTTAGCAGA...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCCCCTTCTCAAAGCTaGGGCCTTGGGGATAAACCT +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSPPSQS*GLGDKP
Trigger: AGGTTTATCCCCAAGGCCCCAGCTTTGAGAAGGGGG...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGGAGACTCTTCACAGATaGAGCCCTGGTGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEETLHR*SPGERL
Trigger: CAGCCTTTCACCAGGGCTCCATCTGTGAAGAGTCTC...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCCTGGAGACAAACAGCTaGTCCCAGCCTGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGLETNS*SQPVPG
Trigger: CCCCGGGACAGGCTGGGACCAGCTGTTTGTCTCCAG...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGTCTGGTAATGAGTCCTaGGATGGTGGGGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWESGNES*DGGEVE
Trigger: TTCCACCTCCCCACCATCCCAGGACTCATTACCAGA...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531933.1
CDS-3UTR TCA 90 bp GCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGACGGACTTCAGCAGCAATaGCAGTCTGTTGTACACCGT +
Preference number: 4 (lower is better)
Translates to: APQDSPRDQEQVPRQLGDGLQQQ*QSVVHR
Trigger: ACGGTGTACAACAGACTGTCATTGCTGCTGAAGTCC...GTCCCCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCGGACTTCAGCAGCAATaGCAGTCTGTTGTACACCGT +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSGLQQQ*QSVVHR
Trigger: ACGGTGTACAACAGACTGTCATTGCTGCTGAAGTCC...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGGTGGTACACACTTCTTaGGAGTCTTCTACAGACGGG +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEVVHTS*ESSTDG
Trigger: CCCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCAC...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGTGGTACACACTTCTTaGGAGTCTTCTACAGACGGG +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWVVHTS*ESSTDG
Trigger: CCCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCAC...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAATAAGCCAGGTCAGCTaGTCCAACGCCCAGGGCAGC +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPISQVS*SNAQGS
Trigger: GCTGCCCTGGGCGTTGGATCAGCTGACCTGGCTTAT...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000526508.5
ENST00000528494.5
CDS-3UTR TCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGGAACCATCAGCTGGTaGGGGTGTGTAGCATTTAAG +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWGTISW*GCVAFK
Trigger: CTTAAATGCTACACACCCTCACCAGCTGATGGTTCC...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000526508.5
ENST00000528494.5
CDS-3UTR TCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACTCCCTCACTGCTGTTTaGTACGGTTTCAGTATCCTC +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHSLTAV*YGFSIL
Trigger: GAGGATACTGAAACCGTATCAAACAGCAGTGAGGGA...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTACTGGGCACTGGGCTTaGCTGCCGCCACGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: RGGSGFGVLILGRQACHITGHWA*LPPRSL
Trigger: GAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGT...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTCCAAGGCCAGCACGTaGGTCTTCTCCAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHSKAST*VFSNWA
Trigger: TGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGA...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp AAAAGCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGTCAAACAGTGGATGGTaGCAGCAGGCAGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KSSTGQPQGSGTSTQAVGSNSGW*QQAGKG
Trigger: CCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGA...CCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCACAGCTGCTGCCAGTaGATGCCCCAGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLHSCCQ*MPQVGQ
Trigger: CTGGCCCACCTGGGGCATTCACTGGCAGCAGCTGTG...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCATACTAACAAGCAGCTaGGAACCACCTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSILTSS*EPPAPL
Trigger: CAGTGGAGCAGGTGGTTCTCAGCTGCTTGTTAGTAT...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGCTCAAAGTCATGGCTaGGACTCTTCACAGATGGAG +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWAQSHG*DSSQME
Trigger: CTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGC...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCACTTTCATGGCAGGTCTaGGGGGCAAGGGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPLSWQV*GARAGL
Trigger: AAGGCCAGCCCTTGCCCCTCAGACCTGCCATGAAAG...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACTGCCAGTGCCTTCTTTaGTTCATGTGTAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHCQCLL*FMCNLW
Trigger: CCAGAGGTTACACATGAAGCAAAGAAGGCACTGGCA...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGCAGCTGTCCTGCCAGTaGCTTCTTTGCTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEQLSCQ*LLCFMC
Trigger: ACACATGAAGCAAAGAAGGCACTGGCAGGACAGCTG...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGCAGCTGTCCTGCCAGTaGCTTCTTTGCTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWQLSCQ*LLCFMC
Trigger: ACACATGAAGCAAAGAAGGCACTGGCAGGACAGCTG...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTGGTGCCCACAGGGGTaGCCACTGTCCCAACACGAA +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREWCPQG*PLSQHE
Trigger: TTCGTGTTGGGACAGTGGGCACCCCTGTGGGCACCA...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGGGAGATGGTGCCCACAGGGGTaGCCACTGTCCCAACACGAA +
Preference number: 4 (lower is better)
Translates to: GLPGLPEWSQSLCRNCGRWCPQG*PLSQHE
Trigger: TTCGTGTTGGGACAGTGGGCACCCCTGTGGGCACCA...TCTCCCACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAGGGGTCCTCTCAAATTaGCTGGTAGACATGAATGCC +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPGVLSN*LVDMNA
Trigger: GGCATTCATGTCTACCAGGCAATTTGAGAGGACCCC...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGAGAAGGGGTGCAGGTTaGCAGTCTCTCCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRRRGAG*QSLLVS
Trigger: GCTGACCAGGAGAGACTGGCAACCTGCACCCCTTCT...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCAGGCCCGTCCCTCACTaGTGTTTGATACGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSRPVPH*CLIRFQ
Trigger: CTGAAACCGTATCAAACAGCAGTGAGGGACGGGCCT...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCACTGGAGCCATCTGAGTaGAGGCTGCCCTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPLEPSE*RLPWRG
Trigger: TCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAG...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTGGGTATTGCCACTGCTaGCCCCGCTGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSGYCHC*PRWSHL
Trigger: CAGATGGCTCCAGCGGGGGCAGCAGTGGCAATACCC...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGGGAGACATGGGTATTGCCACTaGTGCCCCCGCTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: GLPGLPEWSQSLCRNCGRHGYCH*CPRWSH
Trigger: ATGGCTCCAGCGGGGGCAGCAGTGGCAATACCCATG...TCTCCCACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACAGTCATCATGGGTATTaGCACTGCTGCCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHSHHGY*HCCPRW
Trigger: CCAGCGGGGGCAGCAGTGGCAATACCCATGATGACT...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCACAAAAAGGGGGTGCTaGTGGGACTCAAGGATACTT +
Preference number: 4 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPTKRGC*WDSRIL
Trigger: AAGTATCCTTGAGTCCCAGCAGCACCCCCTTTTTGT...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACACAAAAAGGGGGTGCTaGTGGGACTCAAGGATACTT +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHTKRGC*WDSRIL
Trigger: AAGTATCCTTGAGTCCCAGCAGCACCCCCTTTTTGT...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp CTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGGGCAGCCACCAGGGCTaGTCAGACCCTCCCGACCTT +
Preference number: 4 (lower is better)
Translates to: LFLRLHTNLLATSWNVKQGSHQG*SDPPDL
Trigger: AAGGTCGGGAGGGTCTGAGCAGCCCTGGTGGCTGCC...CTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp TCTGGTCCCCGCCAGAGCCTGCTCCAATCCTCAGAAGTCAGCCTTGTATGTGGGCAGCTGAGAACCACCTaGTCCACTGAAGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SGPRQSLLQSSEVSLVCGQLRTT*STEAQL
Trigger: CAGCTGTGCTTCAGTGGAGCAGGTGGTTCTCAGCTG...CCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGTCCCCGCCAGAGCCTaGTCCAATCCTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRVPARA*SNPQKS
Trigger: TGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGAC...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp AAAAGCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGTCCCCGCCAGAGCCTaGTCCAATCCTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: KSSTGQPQGSGTSTQAVGVPARA*SNPQKS
Trigger: TGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGAC...CCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp AACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGAGCAAGCCACGCATGTaGTCTGGGCCAAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: NLSLGSASHACALGQSQESKPRM*SGPKSG
Trigger: TCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCT...CTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCGCACCCACGTCGACTaGCGCTCTTCAGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: HQSLGHQLECQTVDGDSRRTHVD*RSSVLP
Trigger: GGGAAGCACTGAAGAGCGCCAGTCGACGTGGGTGCG...CCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGGCTTCAGAAGGGTCCTaGCTCGCAGGCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMASEGS*LAGPRR
Trigger: ACGTCTGGGGCCTGCGAGCCAGGACCCTTCTGAAGC...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCCATGCCCTTGTTTCCTaGAGAGCCTATAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSHALVS*RAYRLV
Trigger: CACCAGCCTATAGGCTCTCCAGGAAACAAGGGCATG...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GGCCTTGGGGATAAACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCATGCCCTTGTTTCCTaGAGAGCCTATAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: GLGDKPEPGFSKPRMCSGHALVS*RAYRLV
Trigger: CACCAGCCTATAGGCTCTCCAGGAAACAAGGGCATG...CCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTTTATCCCCAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACAATCCCCATGATAGGTaGGGTCCTCTCAAATTGCCT +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHNPHDR*GPLKLP
Trigger: AGGCAATTTGAGAGGACCCCACCTATCATGGGGATT...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCGGGATGGTGGGGAGGTaGAAAAAGAGGTGGTACACA +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSGMVGR*KKRWYT
Trigger: TGTGTACCACCTCTTTTTCCACCTCCCCACCATCCC...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCGGGATGGTGGGGAGGTaGAAAAAGAGGTGGTACACA +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPGMVGR*KKRWYT
Trigger: TGTGTACCACCTCTTTTTCCACCTCCCCACCATCCC...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGCATGGACAGGCTGGTTaGGAGCAAGGGGTACCCCAC +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREHGQAG*EQGVPH
Trigger: GTGGGGTACCCCTTGCTCCCAACCAGCCTGTCCATG...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACTCAGCCTGGGTACCATaGACAGGCTGGTTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHSAWVP*TGWLGA
Trigger: TGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGA...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGTGTGGCAGCACAGTaGGTTCTGTCAGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRGVAAQ*VLSEGV
Trigger: CACCCCTTCTGACAGAACCCACTGTGCTGCCACACC...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACGGTGTGGCAGCACAGTaGGTTCTGTCAGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHGVAAQ*VLSEGV
Trigger: CACCCCTTCTGACAGAACCCACTGTGCTGCCACACC...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCTCGTCAGGGTCACCTaGTTAATGGGTTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHLVRVT*LMGLLT
Trigger: TGTCAACAAACCCATTAACCAGGTGACCCTGACGAG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCCAGCTCCAAATTCTTaGGAGCAAACATGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHPAPNS*EQTWQR
Trigger: CCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGACACTGCTGCCCCCGCTaGAGCCATCTGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: FCDSTPISWPPAGMSNSGHCCPR*SHLSAG
Trigger: GCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTG...TCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TATCATAACAAAGTCATCATGGGTATTGCCACTGCTGCCCCCGCTGGAGCCATCCACTGCTGCCCCCGCTaGAGCCATCTGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: YHNKVIMGIATAAPAGAIHCCPR*SHLSAG
Trigger: GCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTG...GATGGCTCCAGCGGGGGCAGCAGTGGCAATACCCATGATGACTTTGTTATGATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR CCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCGCTGCTCAGCTGAGGTaGGTTCTGAAACTCCCGATA +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAAAQLR*VLKLPI
Trigger: TATCGGGAGTTTCAGAACCCACCTCAGCTGAGCAGC...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCGCTGCTCAGCTGAGGTaGGTTCTGAAACTCCCGATA +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPAAQLR*VLKLPI
Trigger: TATCGGGAGTTTCAGAACCCACCTCAGCTGAGCAGC...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACAGGCTGCTTATGCCCTaGGGCCACAAAAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHRLLMP*GHKKGV
Trigger: CACCCCCTTTTTGTGGCCCCAGGGCATAAGCAGCCT...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCATGGAATGTCAAACAGTaGATGGTGACAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPWNVKQ*MVTAGR
Trigger: CCTGCCTGCTGTCACCATCCACTGTTTGACATTCCA...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGTGGAATGTCAAACAGTaGATGGTGACAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEWNVKQ*MVTAGR
Trigger: CCTGCCTGCTGTCACCATCCACTGTTTGACATTCCA...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCACTCTTGGCCACCAGCTaGAATGTCAAACAGTGGATG +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPLLATS*NVKQWM
Trigger: CATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAG...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCTCCACACCAATCTCTTaGCCACCAGCTGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSSTPIS*PPAGMS
Trigger: TGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGA...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACGCACCCAGGACTTCCTaGGCTGCCAGAATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHAPRTS*AARMES
Trigger: TGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTGC...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCCTAACCACTACATGTaGCCATCACATTTAGCACCC +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHPNHYM*PSHLAP
Trigger: GGGTGCTAAATGTGATGGCCACATGTAGTGGTTAGG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCGACTACCAGCGAGGCTaGGAAAGGACAGATCATAGG +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPDYQRG*ERTDHR
Trigger: CCTATGATCTGTCCTTTCCCAGCCTCGCTGGTAGTC...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCGTGGGCCAGGAGGAATaGAGTAGACCTAGATCTCCT +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPVGQEE*SRPRSP
Trigger: AGGAGATCTAGGTCTACTCCATTCCTCCTGGCCCAC...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp AGACACTTGAGGTCTTTCTGCGCTTCACAACGCACCACTCTCCCCTTTCCCAGAGCCACGCATGTGCTCTaGGCCAAAGTCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: RHLRSFCASQRTTLPFPRATHVL*AKVRRA
Trigger: GGCCCTCCTGACTTTGGCCCAGAGCACATGCGTGGC...TCTGGGAAAGGGGAGAGTGGTGCGTTGTGAAGCGCAGAAAGACCTCAAGTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR CCA 90 bp TCTGGTCCCCGCCAGAGCCTGCTCCAATCCTCAGAAGTCAGCCTTGTATGTGGGCCCCCTTCTCAAAGCTaGGGCCTTGGGGATAAACCT +
Preference number: 4 (lower is better)
Translates to: SGPRQSLLQSSEVSLVCGPPSQS*GLGDKP
Trigger: AGGTTTATCCCCAAGGCCCCAGCTTTGAGAAGGGGG...CCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCAAACACACACTGGGATaGTGGGGAGGTGGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPKHTLG*WGGGKR
Trigger: TCTTTTTCCACCTCCCCACCATCCCAGTGTGTGTTT...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528494.5
CDS-3UTR TCA 90 bp TTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGAGCTCCGGAGCTGCAGTaGCCGTACACGTCGCCGATA +
Preference number: 4 (lower is better)
Translates to: FCDSTPISWPPAGMSNSGAPELQ*PYTSPI
Trigger: TATCGGCGACGTGTACGGTCACTGCAGCTCCGGAGC...TCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCTTCTGTCCTGGGAATTaGGATCAGTTTCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPFCPGN*DQFPLP
Trigger: AGGCAATGGAAACTGATCTCAATTCCCAGGACAGAA...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
CDS-3UTR TCA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCGTGGTACACACTTCTTaGGAGTCTTCTACAGACGGG +
Preference number: 4 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSVVHTS*ESSTDG
Trigger: CCCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCAC...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCGTCTCCAAGACATCGTaGGGGGAGGCCCGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLVSKTS*GEARPS
Trigger: TGAGGGACGGGCCTCCCCTCACGATGTCTTGGAGAC...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp TTCTGGGAAGAACTTAATGCTGGCTACAAACCCGTAAGCCGAGGGGCCATGGTTGTCTCCAAGACATCGTaGGGGGAGGCCCGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: FWEELNAGYKPVSRGAMVVSKTS*GEARPS
Trigger: TGAGGGACGGGCCTCCCCTCACGATGTCTTGGAGAC...AACCATGGCCCCTCGGCTTACGGGTTTGTAGCCAGCATTAAGTTCTTCCCAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR TCA 90 bp GAGAGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCTGTTTCATAGCAAGCCCGCTGGAGCCATCTaGGTGCAGGCTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ERRFSLWGIWRIHLFHSKPAGAI*VQAALE
Trigger: CTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGG...CTTGCTATGAAACAGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR TCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGCAGGAGGAACAGGATaGCACCCTTGGGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHAGGTG*HPWEAV
Trigger: AACTGCTTCCCAAGGGTGTCATCCTGTTCCTCCTGC...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp CACTGGGAGGTGACTTTGCCCCCGGCCAGCCCTCTTCTTGGATCTCGCTGTCTGTCATACGCCCAGCTTTaGTTTCTCAACCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: HWEVTLPPASPLLGSRCLSYAQL*FLNQKP
Trigger: TGGCTTCTGGTTGAGAAATCAAAGCTGGGCGTATGA...CAGACAGCGAGATCCAAGAAGAGGGCTGGCCGGGGGCAAAGTCACCTCCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCATACTAACAAGCAGCTaGGAACCACCTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSILTSS*EPPAPL
Trigger: CAGTGGAGCAGGTGGTTCTCAGCTGCTTGTTAGTAT...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCAGATGGAGCCCTGGTaGAAGGCTGCTGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSQMEPW*KAAATC
Trigger: ACAGGTGGCAGCAGCCTTTCACCAGGGCTCCATCTG...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCTTTCATGGCAGGTCTaGGGGGCAAGGGCTGGCCTT +
Preference number: 4 (lower is better)
Translates to: HQSLGHQLECQTVDGDSRLSWQV*GARAGL
Trigger: AAGGCCAGCCCTTGCCCCTCAGACCTGCCATGAAAG...CCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CAGGAAGTAAAGGGGACAATGAAGAGAGCTAAGGGACTCCTTCCTTCTTCCTCCTCCGCGCTCCGGAGCTaGAGTGACCGTACACGTCGC +
Preference number: 4 (lower is better)
Translates to: QEVKGTMKRAKGLLPSSSSALRS*SDRTRR
Trigger: GCGACGTGTACGGTCACTGCAGCTCCGGAGCGCGGA...GGAGGAAGAAGGAAGGAGTCCCTTAGCTCTCTTCATTGTCCCCTTTACTTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACCATGGACCTCCCGACTaGAGGCAGCTGTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNHGPPD*RQLSCQ
Trigger: CTGGCAGGACAGCTGCCTGCAGTCGGGAGGTCCATG...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTGGTGCCCACAGGGGTaGCCACTGTCCCAACACGAA +
Preference number: 4 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMWCPQG*PLSQHE
Trigger: TTCGTGTTGGGACAGTGGGCACCCCTGTGGGCACCA...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTTGGTGCCCACAGGGGTaGCCACTGTCCCAACACGAA +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSWCPQG*PLSQHE
Trigger: TTCGTGTTGGGACAGTGGGCACCCCTGTGGGCACCA...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCATGGGTATTGCCACTaGTGCCCCCGCTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSHGYCH*CPRWSH
Trigger: ATGGCTCCAGCGGGGGCAGCAGTGGCAATACCCATG...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTAGTCATCATGGGTATTaGCACTGCTGCCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTSHHGY*HCCPRW
Trigger: CCAGCGGGGGCAGCAGTGGCAATACCCATGATGACT...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACTTCAGCCATGGACTGTaGTCCAATATCTATGGAGAG +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHFSHGL*SNIYGE
Trigger: CTCTCCATAGATATTGGAGCACAGTCCATGGCTGAA...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGACAAAAAGGGGGTGCTaGTGGGACTCAAGGATACTT +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWTKRGC*WDSRIL
Trigger: AAGTATCCTTGAGTCCCAGCAGCACCCCCTTTTTGT...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACATGGGAGGCTGCTTATaGCCTGGGGCCACAAAAAGG +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHMGGCL*PGATKR
Trigger: CCTTTTTGTGGCCCCAGGGCATAAGCAGCCTCCCAT...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGTCTCCTTCCTCTTTCTaGGACTCCACACCAATCTCT +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWSPSSF*DSTPIS
Trigger: AGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp CACTGGGAGGTGACTTTGCCCCCGGCCAGCCCTCTTCTTGGATCTCGCTGTCTGTGGAGTCAGTCACTCTaGAGAAACTGTGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: HWEVTLPPASPLLGSRCLWSQSL*RNCGRC
Trigger: ACATCTCCCACAGTTTCTGCAGAGTGACTGACTCCA...CAGACAGCGAGATCCAAGAAGAGGGCTGGCCGGGGGCAAAGTCACCTCCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TCTGGTCCCCGCCAGAGCCTGCTCCAATCCTCAGAAGTCAGCCTTGTATGTGGGGCTGCCACCTGTAGATaGCAAAGATTGCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SGPRQSLLQSSEVSLVCGAATCR*QRLLPQ
Trigger: CTGAGGCAGCAATCTTTGGCATCTACAGGTGGCAGC...CCCACATACAAGGCTGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAGCTGGCCTTAACAGTTaGTTTACTTCTCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPAGLNS*FTSPKL
Trigger: GAGCTTGGGAGAAGTAAAGCAACTGTTAAGGCCAGC...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp ACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACCTGTCCCGGGGGTGCTaGAGGAGTCAGTCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: TPHQSLGHQLECQTVDGDLSRGC*RSQSRA
Trigger: AGCCCTAGACTGACTCCTGCAGCACCCCCGGGACAG...GTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp ACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCCTGTCCCGGGGGTaGTGCAGGAGTCAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: TPHQSLGHQLECQTVDGDSLSRG*CRSQSR
Trigger: CCTAGACTGACTCCTGCAGCACCCCCGGGACAGGCT...GTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTGGAAAAGGCCAGTCCTaGCATGGGGACCCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSGKGQS*HGDPQG
Trigger: ACCCTGAGGGTCCCCATGGCAGGACTGGCCTTTTCC...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000528494.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCACAGTGCTTCCCTCACTaGTTAAGCGGTCACTCCCGC +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPQCFPH*LSGHSR
Trigger: GCGGGAGTGACCGCTTAACCAGTGAGGGAAGCACTG...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCGCACCCACGTCGACTaGCGCTCTTCAGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLRTHVD*RSSVLP
Trigger: GGGAAGCACTGAAGAGCGCCAGTCGACGTGGGTGCG...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCGCACCCACGTCGACTaGCGCTCTTCAGTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSRTHVD*RSSVLP
Trigger: GGGAAGCACTGAAGAGCGCCAGTCGACGTGGGTGCG...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACGCTTCAGAAGGGTCCTaGCTCGCAGGCCCCAGACGT +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNASEGS*LAGPRR
Trigger: ACGTCTGGGGCCTGCGAGCCAGGACCCTTCTGAAGC...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGCCTGGACAATCACTTaGACAGTCTTGAGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWAWTIT*TVLRAK
Trigger: TTTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGC...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGACGCCTGGACAATCACTTaGACAGTCTTGAGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: APQDSPRDQEQVPRQLGDAWTIT*TVLRAK
Trigger: TTTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGC...GTCCCCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCGCCTGGACAATCACTTaGACAGTCTTGAGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSAWTIT*TVLRAK
Trigger: TTTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGC...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
CDS-3UTR CCA 90 bp AACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGTCACCAAGCCGAGCCTaGACAATCACTTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: NLSLGSASHACALGQSQESPSRA*TITWTV
Trigger: GACTGTCCAAGTGATTGTCCAGGCTCGGCTTGGTGA...CTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCATGGGAGAGGAGCTaGGATAGGGACGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPAWERS*DRDGPQ
Trigger: TTGTGGACCGTCCCTATCCCAGCTCCTCTCCCATGC...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GAAGCCAATCCAGCTGGTAAACCCCAGGGCAGTGTAGAGAACCTGGGATTAGAGCATGGACAGGCTGGTTaGGAGCAAGGGGTACCCCAC +
Preference number: 4 (lower is better)
Translates to: EANPAGKPQGSVENLGLEHGQAG*EQGVPH
Trigger: GTGGGGTACCCCTTGCTCCCAACCAGCCTGTCCATG...CTCTAATCCCAGGTTCTCTACACTGCCCTGGGGTTTACCAGCTGGATTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTTCAGCCTGGGTACCATaGACAGGCTGGTTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTSAWVP*TGWLGA
Trigger: TGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGA...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCATCAGCCTGGGTACCATaGACAGGCTGGTTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPSAWVP*TGWLGA
Trigger: TGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGA...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCTCTCCTGGTCAGCCTaGGTACCATGGACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HQSLGHQLECQTVDGDSRLSWSA*VPWTGW
Trigger: CCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAG...CCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCCTTTTCGGACAAAGATaGTCTCCAAGACATCGTGAG +
Preference number: 4 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPLFGQR*SPRHRE
Trigger: CTCACGATGTCTTGGAGACCATCTTTGTCCGAAAAG...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGCTCGTCAGGGTCACCTaGTTAATGGGTTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWELVRVT*LMGLLT
Trigger: TGTCAACAAACCCATTAACCAGGTGACCCTGACGAG...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCACCAGCTCCAAATTCTTaGGAGCAAACATGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: FSNWALGLTAATESPGGPPAPNS*EQTWQR
Trigger: CCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGG...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCTGGAGGATTCACCATTaGATCGGTATCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAWRIHH*IGILQL
Trigger: GAGCTGGAGGATACCGATCCAATGGTGAATCCTCCA...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCTGGAGGATTCACCATTaGATCGGTATCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSWRIHH*IGILQL
Trigger: GAGCTGGAGGATACCGATCCAATGGTGAATCCTCCA...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACACTGCTGCCCCCGCTaGAGCCATCTGAGTGCAGGC +
Preference number: 4 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKHCCPR*SHLSAG
Trigger: GCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTG...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCCAAGTCTTCAGCCATaGACTGTGCTCCAATATCTA +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHPSLQP*TVLQYL
Trigger: TAGATATTGGAGCACAGTCCATGGCTGAAGACTTGG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGGGAGAAGGCTGCTTATGCCCTaGGGCCACAAAAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GLPGLPEWSQSLCRNCGRRLLMP*GHKKGV
Trigger: CACCCCCTTTTTGTGGCCCCAGGGCATAAGCAGCCT...TCTCCCACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGGGAGCAGCTGATGCATaGGAGGCTGCTTATGCCCTG +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREGAADA*EAAYAL
Trigger: CAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCC...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTGGAGCAGCTGATGCATaGGAGGCTGCTTATGCCCTG +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTGAADA*EAAYAL
Trigger: CAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCC...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGACTTCTGGGTCCCCATaGGAGAAGCCAGCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPARETSGSP*EKPASL
Trigger: AAGGGAGGCTGGCTTCTCCCATGGGGACCCAGAAGT...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGACCTTCAGGGGTGGGAGTaGTTTTGGAGTTCTGATCTT +
Preference number: 4 (lower is better)
Translates to: APQDSPRDQEQVPRQLGDLQGWE*FWSSDL
Trigger: AAGATCAGAACTCCAAAACCACTCCCACCCCTGAAG...GTCCCCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGGCACCCAGGACTTCCTaGGCTGCCAGAATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREAPRTS*AARMES
Trigger: TGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTGC...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCCCTAACCACTACATGTaGCCATCACATTTAGCACCC +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSPNHYM*PSHLAP
Trigger: GGGTGCTAAATGTGATGGCCACATGTAGTGGTTAGG...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTGCCACGCATGTGCTCTaGGCCAAAGTCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSATHVL*AKVRRA
Trigger: GGCCCTCCTGACTTTGGCCCAGAGCACATGCGTGGC...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCTGCTGCCTCAGACAATaGCTAGGCCTTTCCATGCAA +
Preference number: 4 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSCCLRQ*LGLSMQ
Trigger: TTGCATGGAAAGGCCTAGCCATTGTCTGAGGCAGCA...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCTGGAGACAAACAGCTaGTCCCAGCCTGTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSLETNS*SQPVPG
Trigger: CCCCGGGACAGGCTGGGACCAGCTGTTTGTCTCCAG...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CAA 72 bp CACGCATGTGCTCTGGGCCAAAGTCAGGAGGGCCAGTaGGCTGCTACTGCTTCTGCTAACACTTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: HACALGQSQEGQ*AATASANTSWW
Trigger: CCACCAAGAAGTGTTAGCAGAAGCAGTAGCAGCCAACTGGCCCTCCTGACTTTGGCCCAGAGCACATGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CAA 72 bp GGCCACACCCGACTCAAAACAGGCTTGCCCAGACACTaGAGGTCTTTCTGCGCTTCACAACGCACCACTCTC +
Preference number: 4 (lower is better)
Translates to: GHTRLKTGLPRH*RSFCASQRTTL
Trigger: GAGAGTGGTGCGTTGTGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGCCTGTTTTGAGTCGGGTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR TCA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAAGCTCCGGAGCTGCAGTaGCCGTACACGTCGCCGATA +
Preference number: 4 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKAPELQ*PYTSPI
Trigger: TATCGGCGACGTGTACGGTCACTGCAGCTCCGGAGC...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCCTAAGCCACTCAGCTaGACTTCTCCAAAATATATC +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHPKPLS*TSPKYI
Trigger: GATATATTTTGGAGAAGTTCAGCTGAGTGGCTTAGG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCGGACGGTCCACAAAGTaGTCAATAATAATCCCCATG +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSGRSTK*SIIIPM
Trigger: CATGGGGATTATTATTGATCACTTTGTGGACCGTCC...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTCCCTCACTGCTGTTTaGTACGGTTTCAGTATCCTC +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPSLTAV*YGFSIL
Trigger: GAGGATACTGAAACCGTATCAAACAGCAGTGAGGGA...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp GCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAGTCAGTTCCAGTCCCGCTGGAGCCATCTaGGTGCAGGCTGCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: ALTRNTQLSKVKPLVSSSPAGAI*VQAALE
Trigger: CTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGG...ACTGGAACTGACTAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCAGGGGTGGGAGCAGCTaGTGCATGGGAGGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLRGGSS*CMGGCL
Trigger: TAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCT...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTGCAGGAGGAACAGGATaGCACCCTTGGGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTAGGTG*HPWEAV
Trigger: AACTGCTTCCCAAGGGTGTCATCCTGTTCCTCCTGC...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GAAGCCAATCCAGCTGGTAAACCCCAGGGCAGTGTAGAGAACCTGGGATTAGAGAACCACCTGCTCCACTaGAGCACAGCTGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: EANPAGKPQGSVENLGLENHLLH*STAAAS
Trigger: ACTGGCAGCAGCTGTGCTTCAGTGGAGCAGGTGGTT...CTCTAATCCCAGGTTCTCTACACTGCCCTGGGGTTTACCAGCTGGATTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACCAGATGGAGCCCTGGTaGAAGGCTGCTGCCACCTGT +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNQMEPW*KAAATC
Trigger: ACAGGTGGCAGCAGCCTTTCACCAGGGCTCCATCTG...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGCCAGTGCCTTCTTTaGTTCATGTGTAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPCQCLL*FMCNLW
Trigger: CCAGAGGTTACACATGAAGCAAAGAAGGCACTGGCA...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACAGGCCCGTCCCTCACTaGTGTTTGATACGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHRPVPH*CLIRFQ
Trigger: CTGAAACCGTATCAAACAGCAGTGAGGGACGGGCCT...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACAGGCCCGTCCCTCACTaGTGTTTGATACGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHRPVPH*CLIRFQ
Trigger: CTGAAACCGTATCAAACAGCAGTGAGGGACGGGCCT...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACCTGGAGCCATCTGAGTaGAGGCTGCCCTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNLEPSE*RLPWRG
Trigger: TCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAG...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp TTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGACATGGGTATTGCCACTaGTGCCCCCGCTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: FCDSTPISWPPAGMSNSGHGYCH*CPRWSH
Trigger: ATGGCTCCAGCGGGGGCAGCAGTGGCAATACCCATG...TCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGCAAGGATACTTTTACTaGAGGGTTTCCACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKQGYFY*RVSTKA
Trigger: TGCCTTTGTGGAAACCCTGCAGTAAAAGTATCCTTG...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCACAAAAAGGGGGTGCTaGTGGGACTCAAGGATACTT +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPTKRGC*WDSRIL
Trigger: AAGTATCCTTGAGTCCCAGCAGCACCCCCTTTTTGT...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp CACCCAGGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTATGGGAGGCTGCTTATaGCCTGGGGCCACAAAAAGG +
Preference number: 4 (lower is better)
Translates to: HPGLPGLPEWSQSLCRNCMGGCL*PGATKR
Trigger: CCTTTTTGTGGCCCCAGGGCATAAGCAGCCTCCCAT...ACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp ACTGTCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGCAGGACTTCCTGGGCTaGCAGAATGGAGTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: TVSFLFLRLHTNLLATSWQDFLG*QNGVSH
Trigger: GTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTG...CCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp AAAAGCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGCTGCCACCTGTAGATaGCAAAGATTGCTGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KSSTGQPQGSGTSTQAVGAATCR*QRLLPQ
Trigger: CTGAGGCAGCAATCTTTGGCATCTACAGGTGGCAGC...CCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACTGTCCCGGGGGTGCTaGAGGAGTCAGTCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKLSRGC*RSQSRA
Trigger: AGCCCTAGACTGACTCCTGCAGCACCCCCGGGACAG...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAAAGCCTGTCCCGGGGGTaGTGCAGGAGTCAGTCTAGG +
Preference number: 4 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKSLSRG*CRSQSR
Trigger: CCTAGACTGACTCCTGCAGCACCCCCGGGACAGGCT...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCCTCACCTGCGAAGCTaGGGCACAAAGAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSPHLRS*GTKSGS
Trigger: GGAACCACTCTTTGTGCCGCAGCTTCGCAGGTGAGG...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526508.5
CDS-3UTR CCA 90 bp ATTCTCCAACTGAATATTCAAATTCAAGCCCCTGATAGGGGACCAGGGAAAGAGACCAGCCGCGCCTCCTaGCTGAGGGTTCCGCGCTCC +
Preference number: 4 (lower is better)
Translates to: ILQLNIQIQAPDRGPGKETSRAS*LRVPRS
Trigger: GGAGCGCGGAACCCTCAGCCAGGAGGCGCGGCTGGT...CTCTTTCCCTGGTCCCCTATCAGGGGCTTGAATTTGAATATTCAGTTGGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR CCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCCTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACG +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGLRHKE*FRALIT
Trigger: CGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAG...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCACTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACG +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPLRHKE*FRALIT
Trigger: CGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAG...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGTCACCAAGCCGAGCCTaGACAATCACTTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRSPSRA*TITWTV
Trigger: GACTGTCCAAGTGATTGTCCAGGCTCGGCTTGGTGA...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACAAATCTCCACACACATaGACCTCCCGACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHKSPHT*TSRLQA
Trigger: TGCCTGCAGTCGGGAGGTCCATGTGTGTGGAGATTT...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GGCCTTGGGGATAAACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGAATCCCCATGATAGGTaGGGTCCTCTCAAATTGCCT +
Preference number: 4 (lower is better)
Translates to: GLGDKPEPGFSKPRMCSGNPHDR*GPLKLP
Trigger: AGGCAATTTGAGAGGACCCCACCTATCATGGGGATT...CCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTTTATCCCCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGAATTGCAGGGGTGCATaGGAGAGGAGCTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPARENCRGA*ERSWDR
Trigger: CCTATCCCAGCTCCTCTCCCATGCACCCCTGCAATT...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAATTGCAGGGGTGCATaGGAGAGGAGCTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: SLGHQLECQTVDGDSRQGNCRGA*ERSWDR
Trigger: CCTATCCCAGCTCCTCTCCCATGCACCCCTGCAATT...TCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp AAAAGCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGGATGGTGGGGAGGTaGAAAAAGAGGTGGTACACA +
Preference number: 4 (lower is better)
Translates to: KSSTGQPQGSGTSTQAVGGMVGR*KKRWYT
Trigger: TGTGTACCACCTCTTTTTCCACCTCCCCACCATCCC...CCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGCTTTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCCCAAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTCGAGAGCTTGAGAGCTaGGATGGTGGGGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: SQAQLKVMAETLHRWSPGRELES*DGGEVE
Trigger: TTCCACCTCCCCACCATCCCAGCTCTCAAGCTCTCG...ACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359513.8
ENST00000526508.5
CDS-3UTR CCA 90 bp GAAGCCAATCCAGCTGGTAAACCCCAGGGCAGTGTAGAGAACCTGGGATTAGAGGTACCATGGACAGGCTaGTTGGGAGCAAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: EANPAGKPQGSVENLGLEVPWTG*LGARGT
Trigger: GGTACCCCTTGCTCCCAACCAGCCTGTCCATGGTAC...CTCTAATCCCAGGTTCTCTACACTGCCCTGGGGTTTACCAGCTGGATTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCCCAAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGTACCATGGACAGGCTaGTTGGGAGCAAGGGGTACC +
Preference number: 4 (lower is better)
Translates to: SQAQLKVMAETLHRWSPGVPWTG*LGARGT
Trigger: GGTACCCCTTGCTCCCAACCAGCCTGTCCATGGTAC...ACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CACCCGACTCAAAACAGGCTTGCCCAGACACTTGAGGTCTTTCTGCGCTTCACATCAGCCTGGGTACCATaGACAGGCTGGTTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: HPTQNRLAQTLEVFLRFTSAWVP*TGWLGA
Trigger: TGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGA...TGTGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGCCTGTTTTGAGTCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR CCA 90 bp CTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGCTCTCCTGGTCAGCCTaGGTACCATGGACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LFLRLHTNLLATSWNVKQLSWSA*VPWTGW
Trigger: CCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAG...CTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp CACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGGGTGTGGCAGCACAGTaGGTTCTGTCAGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: HQSLGHQLECQTVDGDSRGVAAQ*VLSEGV
Trigger: CACCCCTTCTGACAGAACCCACTGTGCTGCCACACC...CCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCCCAGCTCCAAATTCTTaGGAGCAAACATGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPPAPNS*EQTWQR
Trigger: CCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGG...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCAGTCTCTGGGGAATCTaGAGGATTCACCATTGGATC +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSSLWGI*RIHHWI
Trigger: GATCCAATGGTGAATCCTCCAGATTCCCCAGAGACT...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCAGGAGATTCAGTCTCTaGGGAATCTGGAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPRRFSL*GIWRIH
Trigger: GTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCT...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTACTTCTGGGTCCCCATaGGAGAAGCCAGCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSTSGSP*EKPASL
Trigger: AAGGGAGGCTGGCTTCTCCCATGGGGACCCAGAAGT...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAAAGAGTAGGGACTTCTaGGTCCCCATGGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPKSRDF*VPMGEA
Trigger: GGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTT...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGAAGAGTAGGGACTTCTaGGTCCCCATGGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREKSRDF*VPMGEA
Trigger: GGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTT...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GGCCTTGGGGATAAACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCTTCAGGGGTGGGAGTaGTTTTGGAGTTCTGATCTT +
Preference number: 4 (lower is better)
Translates to: GLGDKPEPGFSKPRMCSGLQGWE*FWSSDL
Trigger: AAGATCAGAACTCCAAAACCACTCCCACCCCTGAAG...CCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTTTATCCCCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGACCCGACCTTCAGGGGTaGGAGTGGTTTTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SLGHQLECQTVDGDSRQGPDLQG*EWFWSS
Trigger: AGAACTCCAAAACCACTCCCACCCCTGAAGGTCGGG...TCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCATCTCGCTGTCTGTATaGTGGGAAGATCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPISLSV*WEDPQS
Trigger: GCTTTGAGGATCTTCCCACCATACAGACAGCGAGAT...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCATCTCGCTGTCTGTATaGTGGGAAGATCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAISLSV*WEDPQS
Trigger: GCTTTGAGGATCTTCCCACCATACAGACAGCGAGAT...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp AAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGAAACCAGTGCAGCCACACTaGGAGGTGACTTTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: KLSSKSWLRLFTDGALVKPVQPH*EVTLPP
Trigger: CGGGGGCAAAGTCACCTCCCAGTGTGGCTGCACTGG...TTTCACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCCCTAACCACTACATGTaGCCATCACATTTAGCACCC +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPPNHYM*PSHLAP
Trigger: GGGTGCTAAATGTGATGGCCACATGTAGTGGTTAGG...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACGACTACCAGCGAGGCTaGGAAAGGACAGATCATAGG +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHDYQRG*ERTDHR
Trigger: CCTATGATCTGTCCTTTCCCAGCCTCGCTGGTAGTC...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTAGTGAATGCCCCAGGTaGGCCAGGAGGAATGGAGTA +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTSECPR*ARRNGV
Trigger: TACTCCATTCCTCCTGGCCCACCTGGGGCATTCACT...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CACCCAGGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTAGTGAATGCCCCAGGTaGGCCAGGAGGAATGGAGTA +
Preference number: 4 (lower is better)
Translates to: HPGLPGLPEWSQSLCRNCSECPR*ARRNGV
Trigger: TACTCCATTCCTCCTGGCCCACCTGGGGCATTCACT...ACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCTAACACTTCTTGGTaGCAGCAGCAGCACGCAGAG +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPANTSW*QQQHAE
Trigger: CTCTGCGTGCTGCTGCTGCCACCAAGAAGTGTTAGC...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAAGCCACGCATGTGCTCTaGGCCAAAGTCAGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKATHVL*AKVRRA
Trigger: GGCCCTCCTGACTTTGGCCCAGAGCACATGCGTGGC...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGCCAGGAACCATCAGCTaGGATGGTGGGGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMPGTIS*DGGEVE
Trigger: TTCCACCTCCCCACCATCCCAGCTGATGGTTCCTGG...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524625.5
ENST00000529655.5
CDS-3UTR TCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGCCTAAGCCACTCAGCTaGACTTCTCCAAAATATATC +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWPKPLS*TSPKYI
Trigger: GATATATTTTGGAGAAGTTCAGCTGAGTGGCTTAGG...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCGGACGGTCCACAAAGTaGTCAATAATAATCCCCATG +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPGRSTK*SIIIPM
Trigger: CATGGGGATTATTATTGATCACTTTGTGGACCGTCC...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGGTACACACTTCTTaGGAGTCTTCTACAGACGGG +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHVVHTS*ESSTDG
Trigger: CCCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCAC...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCACAGATGGCCCTGCTaGGGGCTTTTTCGTACGAAG +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSHRWPC*GLFRTK
Trigger: CTTCGTACGAAAAAGCCCTCAGCAGGGCCATCTGTG...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GAAGCCAATCCAGCTGGTAAACCCCAGGGCAGTGTAGAGAACCTGGGATTAGAGCACAGATGGCCCTGCTaGGGGCTTTTTCGTACGAAG +
Preference number: 4 (lower is better)
Translates to: EANPAGKPQGSVENLGLEHRWPC*GLFRTK
Trigger: CTTCGTACGAAAAAGCCCTCAGCAGGGCCATCTGTG...CTCTAATCCCAGGTTCTCTACACTGCCCTGGGGTTTACCAGCTGGATTGGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp ACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACTCAAACAGTGGATGGTaGCAGCAGGCAGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: TPHQSLGHQLECQTVDGDSNSGW*QQAGKG
Trigger: CCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGA...GTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR TCA 90 bp GAAGCCAATCCAGCTGGTAAACCCCAGGGCAGTGTAGAGAACCTGGGATTAGAGAGACCTAGATCTCCTTaGCCAGGACTACCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: EANPAGKPQGSVENLGLERPRSP*PGLPAR
Trigger: CCTCGCTGGTAGTCCTGGTCAAGGAGATCTAGGTCT...CTCTAATCCCAGGTTCTCTACACTGCCCTGGGGTTTACCAGCTGGATTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp AAAAGCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGATACTAACAAGCAGCTaGGAACCACCTGCTCCACTG +
Preference number: 4 (lower is better)
Translates to: KSSTGQPQGSGTSTQAVGILTSS*EPPAPL
Trigger: CAGTGGAGCAGGTGGTTCTCAGCTGCTTGTTAGTAT...CCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGAAAGAGAGCAGTAGCTaGAATATGGGGGCATCAATA +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWKESSS*NMGASI
Trigger: TATTGATGCCCCCATATTTCAGCTACTGCTCTCTTT...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGACTGGCGCTCTTCAGTaGTTCCCTCACTGGTTAAGC +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPARETGALQ*FPHWLS
Trigger: GCTTAACCAGTGAGGGAAGCACTGAAGAGCGCCAGT...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAACTGGCGCTCTTCAGTaGTTCCCTCACTGGTTAAGC +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPTGALQ*FPHWLS
Trigger: GCTTAACCAGTGAGGGAAGCACTGAAGAGCGCCAGT...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAATATGACATATTCATaGCCTTGTTTCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKNMTYS*PCFLES
Trigger: GCTCTCCAGGAAACAAGGGCATGAATATGTCATATT...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACAATATGACATATTCATaGCCTTGTTTCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHNMTYS*PCFLES
Trigger: GCTCTCCAGGAAACAAGGGCATGAATATGTCATATT...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGGGGTCCTCTCAAATTaGCTGGTAGACATGAATGCC +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHGVLSN*LVDMNA
Trigger: GGCATTCATGTCTACCAGGCAATTTGAGAGGACCCC...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CACCCAGGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTCAGCAGTTCTGTAATTaGAGGGGTGCATGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HPGLPGLPEWSQSLCRNCQQFCN*RGAWER
Trigger: CCTCTCCCATGCACCCCTGCAATTACAGAACTGCTG...ACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp ACTGTCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGCAGCAGTTCTGTAATTaGAGGGGTGCATGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TVSFLFLRLHTNLLATSWQQFCN*RGAWER
Trigger: CCTCTCCCATGCACCCCTGCAATTACAGAACTGCTG...CCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTCAGCAGTTCTGTAATTaGAGGGGTGCATGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTQQFCN*RGAWER
Trigger: CCTCTCCCATGCACCCCTGCAATTACAGAACTGCTG...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp ACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGAAGGGGTGCAGGTTaGCAGTCTCTCCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TPHQSLGHQLECQTVDGDRRGAG*QSLLVS
Trigger: GCTGACCAGGAGAGACTGGCAACCTGCACCCCTTCT...GTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTAGAAGGGGTGCAGGTTaGCAGTCTCTCCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSRRGAG*QSLLVS
Trigger: GCTGACCAGGAGAGACTGGCAACCTGCACCCCTTCT...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp ACTGTCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGTTCTGTCAGAAGGGGTaGAGGTTGCCAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TVSFLFLRLHTNLLATSWFCQKG*RLPVSP
Trigger: AGGAGAGACTGGCAACCTGCACCCCTTCTGACAGAA...CCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTTCTGTCAGAAGGGGTaGAGGTTGCCAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREFCQKG*RLPVSP
Trigger: AGGAGAGACTGGCAACCTGCACCCCTTCTGACAGAA...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCCGAGGGGCCATGGTTTATAGTCTGTGGGGGATTAGTGACTCTGGCTCAGGAAAGGCCCGTCCCTCACTaGTGTTTGATACGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: AEGPWFIVCGGLVTLAQERPVPH*CLIRFQ
Trigger: CTGAAACCGTATCAAACAGCAGTGAGGGACGGGCCT...TTCCTGAGCCAGAGTCACTAATCCCCCACAGACTATAAACCATGGCCCCTCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR GCA 90 bp GCCATGGTTTATAGTCTGTGGGGGATTAGTGACTCTGGCTCAGGAAGAACAATGGGGTATTGCCACTGCTaGCCCCGCTGGAGCCATCTG +
Preference number: 4 (lower is better)
Translates to: AMVYSLWGISDSGSGRTMGYCHC*PRWSHL
Trigger: CAGATGGCTCCAGCGGGGGCAGCAGTGGCAATACCC...CATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACTATAAACCATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR GCA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTAGTCATCATGGGTATTaGCACTGCTGCCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RGGSGFGVLILGRQACHISHHGY*HCCPRW
Trigger: CCAGCGGGGGCAGCAGTGGCAATACCCATGATGACT...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp AGTCTGTGGGGGATTAGTGACTCTGGCTCAGGAAGAACAATGACTAGCGCACCAAGTCATCATGGGTATTaGCACTGCTGCCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SLWGISDSGSGRTMTSAPSHHGY*HCCPRW
Trigger: CCAGCGGGGGCAGCAGTGGCAATACCCATGATGACT...TGGTGCGCTAGTCATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR GCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTCATCATGGGTATTaGCACTGCTGCCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNSHHGY*HCCPRW
Trigger: CCAGCGGGGGCAGCAGTGGCAATACCCATGATGACT...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACTATCTATGGAGAGGCTaGTCAGCTGAGGTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHYLWRG*SAEVGS
Trigger: AGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATA...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGCAAGGATACTTTTACTaGAGGGTTTCCACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEQGYFY*RVSTKA
Trigger: TGCCTTTGTGGAAACCCTGCAGTAAAAGTATCCTTG...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGCAAGGATACTTTTACTaGAGGGTTTCCACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWQGYFY*RVSTKA
Trigger: TGCCTTTGTGGAAACCCTGCAGTAAAAGTATCCTTG...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp AACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGTCTCCTTCCTCTTTCTaGGACTCCACACCAATCTCT +
Preference number: 4 (lower is better)
Translates to: NLSLGSASHACALGQSQESPSSF*DSTPIS
Trigger: AGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA...CTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAGTCAGTTCCAGTGCTGCTGCCAGTGAATaGCCCAGGTGGGCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ALTRNTQLSKVKPLVSSSAAASE*PRWARR
Trigger: CCTCCTGGCCCACCTGGGGCATTCACTGGCAGCAGC...ACTGGAACTGACTAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGAGTCCCCGCCAGAGCCTaGTCCAATCCTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: FCDSTPISWPPAGMSNSGVPARA*SNPQKS
Trigger: TGACTTCTGAGGATTGGAGCAGGCTCTGGCGGGGAC...TCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCGTAGATGCCAAAGATTaGTGCCTCAGACAATGGCTA +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPVDAKD*CLRQWL
Trigger: TAGCCATTGTCTGAGGCAGCAATCTTTGGCATCTAC...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACCACTTGAGGTCTTTCTaGGCTTCACAACGCACCACT +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHHLRSF*ASQRTT
Trigger: AGTGGTGCGTTGTGAAGCGCAGAAAGACCTCAAGTG...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR CCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCTCACCAAGCCGAGCCTaGACAATCACTTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGSPSRA*TITWTV
Trigger: GACTGTCCAAGTGATTGTCCAGGCTCGGCTTGGTGA...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCATCACCAAGCCGAGCCTaGACAATCACTTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPSPSRA*TITWTV
Trigger: GACTGTCCAAGTGATTGTCCAGGCTCGGCTTGGTGA...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAAAATCTCCACACACATaGACCTCCCGACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPKSPHT*TSRLQA
Trigger: TGCCTGCAGTCGGGAGGTCCATGTGTGTGGAGATTT...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGATATTTCCAGCTCCATaGAATCTCCCTCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWIFPAP*NLPQKS
Trigger: AGACTTCTGAGGGAGATTCCATGGAGCTGGAAATAT...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp AGACACTTGAGGTCTTTCTGCGCTTCACAACGCACCACTCTCCCCTTTCCCAGAAATTGCAGGGGTGCATaGGAGAGGAGCTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: RHLRSFCASQRTTLPFPRNCRGA*ERSWDR
Trigger: CCTATCCCAGCTCCTCTCCCATGCACCCCTGCAATT...TCTGGGAAAGGGGAGAGTGGTGCGTTGTGAAGCGCAGAAAGACCTCAAGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR CCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGAGGTGGAAAAAGAGGTaGTACACACTTCTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWRWKKR*YTLLES
Trigger: ACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCT...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGAGGTGGAAAAAGAGGTaGTACACACTTCTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWRWKKR*YTLLES
Trigger: ACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCT...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTGGTGTGGCAGCACAGTaGGTTCTGTCAGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSGVAAQ*VLSEGV
Trigger: CACCCCTTCTGACAGAACCCACTGTGCTGCCACACC...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCACAGTATCCTCACTACTaGAGGGTGTGGCAGCACAGT +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPQYPHY*RVWQHS
Trigger: ACTGTGCTGCCACACCCTCCAGTAGTGAGGATACTG...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGCAGTATCCTCACTACTaGAGGGTGTGGCAGCACAGT +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREQYPHY*RVWQHS
Trigger: ACTGTGCTGCCACACCCTCCAGTAGTGAGGATACTG...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCTCTTGGGAGCAAACATaGCAAAGGGTATATCCAAAC +
Preference number: 4 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSSWEQT*QRVYPN
Trigger: GTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGA...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCGCTGCTCAGCTGAGGTaGGTTCTGAAACTCCCGATA +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGAAQLR*VLKLPI
Trigger: TATCGGGAGTTTCAGAACCCACCTCAGCTGAGCAGC...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCCCAAGTCTTCAGCCATaGACTGTGCTCCAATATCTA +
Preference number: 4 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPPSLQP*TVLQYL
Trigger: TAGATATTGGAGCACAGTCCATGGCTGAAGACTTGG...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTGCCAGAAGGCTGCTTATGCCCTaGGGCCACAAAAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: GSGFGVLILGRQACHIARRLLMP*GHKKGV
Trigger: CACCCCCTTTTTGTGGCCCCAGGGCATAAGCAGCCT...TCTGGCAATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp ACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGGCTGCTTATGCCCTaGGGCCACAAAAAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: TPHQSLGHQLECQTVDGDRLLMP*GHKKGV
Trigger: CACCCCCTTTTTGTGGCCCCAGGGCATAAGCAGCCT...GTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCGGAGCAGCTGATGCATaGGAGGCTGCTTATGCCCTG +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLGAADA*EAAYAL
Trigger: CAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCC...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp TTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGAACTTCTGGGTCCCCATaGGAGAAGCCAGCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: FCDSTPISWPPAGMSNSGTSGSP*EKPASL
Trigger: AAGGGAGGCTGGCTTCTCCCATGGGGACCCAGAAGT...TCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGAAGAGTAGGGACTTCTaGGTCCCCATGGGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMKSRDF*VPMGEA
Trigger: GGCTTCTCCCATGGGGACCCAGAAGTCCCTACTCTT...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACTGGAATGTCAAACAGTaGATGGTGACAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHWNVKQ*MVTAGR
Trigger: CCTGCCTGCTGTCACCATCCACTGTTTGACATTCCA...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGTCCACACCAATCTCTTaGCCACCAGCTGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRSTPIS*PPAGMS
Trigger: TGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGA...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACTCCACACCAATCTCTTaGCCACCAGCTGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHSTPIS*PPAGMS
Trigger: TGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGA...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCCCGACCTTCAGGGGTaGGAGTGGTTTTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSPDLQG*EWFWSS
Trigger: AGAACTCCAAAACCACTCCCACCCCTGAAGGTCGGG...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCAAGTACCCAGGCAGTTaGGGGACACACACAACATCC +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGKYPGS*GTHTTS
Trigger: GGATGTTGTGTGTGTCCCCCAACTGCCTGGGTACTT...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGACTACCAGCGAGGCTaGGAAAGGACAGATCATAGG +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPDYQRG*ERTDHR
Trigger: CCTATGATCTGTCCTTTCCCAGCCTCGCTGGTAGTC...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CACCCAGGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGAGACTCTTCACAGATaGAGCCCTGGTGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: HPGLPGLPEWSQSLCRNCETLHR*SPGERL
Trigger: CAGCCTTTCACCAGGGCTCCATCTGTGAAGAGTCTC...ACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGAGACTCTTCACAGATaGAGCCCTGGTGAAAGGCTG +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPETLHR*SPGERL
Trigger: CAGCCTTTCACCAGGGCTCCATCTGTGAAGAGTCTC...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp AGTCTGTGGGGGATTAGTGACTCTGGCTCAGGAAGAACAATGACTAGCGCACCACGGTGGGCTCACCATTaGATCGGTATCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SLWGISDSGSGRTMTSAPRWAHH*IGILQL
Trigger: GAGCTGGAGGATACCGATCCAATGGTGAGCCCACCG...TGGTGCGCTAGTCATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS-3UTR CCA 90 bp CTGCCCTGGAGAGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCCGTAAGACTCGTAGTCAACGGTaGGCTCACCATTGGATCGGT +
Preference number: 4 (lower is better)
Translates to: LPWRGDSVSGESGGFTRKTRSQR*AHHWIG
Trigger: ACCGATCCAATGGTGAGCCCACCGTTGACTACGAGT...CTTACGGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCTCTCCAGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532067.1
CDS-3UTR CCA 90 bp ACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACCCAGGAACCATCAGCTaGGATGGTGGGGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TPHQSLGHQLECQTVDGDPGTIS*DGGEVE
Trigger: TTCCACCTCCCCACCATCCCAGCTGATGGTTCCTGG...GTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000524625.5
ENST00000529655.5
CDS-3UTR TCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCGGACTTCAGCAGCAATaGCAGTCTGTTGTACACCGT +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGGLQQQ*QSVVHR
Trigger: ACGGTGTACAACAGACTGTCATTGCTGCTGAAGTCC...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGGTGGTACACACTTCTTaGGAGTCTTCTACAGACGGG +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREVVHTS*ESSTDG
Trigger: CCCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCAC...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp AAAAGCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGTCCCTCACTGCTGTTTaGTACGGTTTCAGTATCCTC +
Preference number: 4 (lower is better)
Translates to: KSSTGQPQGSGTSTQAVGSLTAV*YGFSIL
Trigger: GAGGATACTGAAACCGTATCAAACAGCAGTGAGGGA...CCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CAGGAAGTAAAGGGGACAATGAAGAGAGCTAAGGGACTCCTTCCTTCTTCCTCCTCCAAGGCCAGCACGTaGGTCTTCTCCAACTGGGCA +
Preference number: 4 (lower is better)
Translates to: QEVKGTMKRAKGLLPSSSSKAST*VFSNWA
Trigger: TGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGA...GGAGGAAGAAGGAAGGAGTCCCTTAGCTCTCTTCATTGTCCCCTTTACTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp CTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGGCAGGAGGAACAGGATaGCACCCTTGGGAAGCAGTT +
Preference number: 4 (lower is better)
Translates to: LFLRLHTNLLATSWNVKQAGGTG*HPWEAV
Trigger: AACTGCTTCCCAAGGGTGTCATCCTGTTCCTCCTGC...CTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp AAAAGCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGTCATACGCCCAGCTTTaGTTTCTCAACCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KSSTGQPQGSGTSTQAVGSYAQL*FLNQKP
Trigger: TGGCTTCTGGTTGAGAAATCAAAGCTGGGCGTATGA...CCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp ACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGACCTAGATCTCCTTaGCCAGGACTACCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: TPHQSLGHQLECQTVDGDRPRSP*PGLPAR
Trigger: CCTCGCTGGTAGTCCTGGTCAAGGAGATCTAGGTCT...GTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp TCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAGCTCAAAGTCATGGCTaGGACTCTTCACAGATGGAG +
Preference number: 4 (lower is better)
Translates to: SLGHQLECQTVDGDSRQGAQSHG*DSSQME
Trigger: CTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGC...TCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCTCAAAGTCATGGCTaGGACTCTTCACAGATGGAG +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPAQSHG*DSSQME
Trigger: CTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGC...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CAGGAAGTAAAGGGGACAATGAAGAGAGCTAAGGGACTCCTTCCTTCTTCCTCCGAGGAGGAGGGACTCTaGCACCTGGAGACAAACAGC +
Preference number: 4 (lower is better)
Translates to: QEVKGTMKRAKGLLPSSSEEEGL*HLETNS
Trigger: GCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTC...GGAGGAAGAAGGAAGGAGTCCCTTAGCTCTCTTCATTGTCCCCTTTACTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTACTGGCGCTCTTCAGTaGTTCCCTCACTGGTTAAGC +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSTGALQ*FPHWLS
Trigger: GCTTAACCAGTGAGGGAAGCACTGAAGAGCGCCAGT...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGAAGATGATGAACGAGTaGAAATCTTTTCACCAAGCC +
Preference number: 4 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEKMMNE*KSFHQA
Trigger: GGCTTGGTGAAAAGATTTGCACTCGTTCATCATCTT...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACTGCCAGTGCCTTCTTTaGTTCATGTGTAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHCQCLL*FMCNLW
Trigger: CCAGAGGTTACACATGAAGCAAAGAAGGCACTGGCA...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp TCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGACAGCTGTCCTGCCAGTaGCTTCTTTGCTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: SLGHQLECQTVDGDSRQGQLSCQ*LLCFMC
Trigger: ACACATGAAGCAAAGAAGGCACTGGCAGGACAGCTG...TCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGAATATGACATATTCATaGCCTTGTTTCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWNMTYS*PCFLES
Trigger: GCTCTCCAGGAAACAAGGGCATGAATATGTCATATT...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGGGGTCCTCTCAAATTaGCTGGTAGACATGAATGCC +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPGVLSN*LVDMNA
Trigger: GGCATTCATGTCTACCAGGCAATTTGAGAGGACCCC...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp TCCCAAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTTTCTGTCAGAAGGGGTaGAGGTTGCCAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SQAQLKVMAETLHRWSPGFCQKG*RLPVSP
Trigger: AGGAGAGACTGGCAACCTGCACCCCTTCTGACAGAA...ACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GAAGAACTTAATGCTGGCTACAAACCCGTAAGCCGAGGGGCCATGGTTTATAGTCATGGGTATTGCCACTaGTGCCCCCGCTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: EELNAGYKPVSRGAMVYSHGYCH*CPRWSH
Trigger: ATGGCTCCAGCGGGGGCAGCAGTGGCAATACCCATG...ACTATAAACCATGGCCCCTCGGCTTACGGGTTTGTAGCCAGCATTAAGTTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR GCA 90 bp TGCTGCAGGAGTCAGTCTAGGGCTCATTCCTTTCATGGCAGGTCTGAGGGGCAATATCTATGGAGAGGCTaGTCAGCTGAGGTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: CCRSQSRAHSFHGRSEGQYLWRG*SAEVGS
Trigger: AGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATA...TTGCCCCTCAGACCTGCCATGAAAGGAATGAGCCCTAGACTGACTCCTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCAAGGATACTTTTACTaGAGGGTTTCCACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSQGYFY*RVSTKA
Trigger: TGCCTTTGTGGAAACCCTGCAGTAAAAGTATCCTTG...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp GGCCTTGGGGATAAACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCCTAGAGATTCAGGGTaGCATTTTTATTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: GLGDKPEPGFSKPRMCSGPRDSG*HFYFPW
Trigger: CCATGGGAAATAAAAATGGCACCCTGAATCTCTAGG...CCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTTTATCCCCAAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGCAGGACTTCCTGGGCTaGCAGAATGGAGTCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LFLRLHTNLLATSWNVKQQDFLG*QNGVSH
Trigger: GTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTG...CTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACCAGCTGAGAACCACCTaGTCCACTGAAGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNQLRTT*STEAQL
Trigger: CAGCTGTGCTTCAGTGGAGCAGGTGGTTCTCAGCTG...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGCAAGCCACGCATGTaGTCTGGGCCAAAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNSKPRM*SGPKSG
Trigger: TCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCT...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGCCTGGACAATCACTTaGACAGTCTTGAGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHAWTIT*TVLRAK
Trigger: TTTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGC...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGGGAGAGCCTATAGGCTaGTGTCACCCTAGTTATAGC +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREGEPIG*CHPSYS
Trigger: GCTATAACTAGGGTGACACCAGCCTATAGGCTCTCC...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TCCCAAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTCATGCCCTTGTTTCCTaGAGAGCCTATAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SQAQLKVMAETLHRWSPGHALVS*RAYRLV
Trigger: CACCAGCCTATAGGCTCTCCAGGAAACAAGGGCATG...ACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCATGCCCTTGTTTCCTaGAGAGCCTATAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSHALVS*RAYRLV
Trigger: CACCAGCCTATAGGCTCTCCAGGAAACAAGGGCATG...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp ACTGTCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGCCAACACGAACTGTCTaGAAGCCTTCTCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: TVSFLFLRLHTNLLATSWPTRTV*KPSPKP
Trigger: TGGCTTAGGAGAAGGCTTCCAGACAGTTCGTGTTGG...CCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGAATCCCCATGATAGGTaGGGTCCTCTCAAATTGCCT +
Preference number: 4 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRNPHDR*GPLKLP
Trigger: AGGCAATTTGAGAGGACCCCACCTATCATGGGGATT...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTAATTGCAGGGGTGCATaGGAGAGGAGCTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: RGGSGFGVLILGRQACHINCRGA*ERSWDR
Trigger: CCTATCCCAGCTCCTCTCCCATGCACCCCTGCAATT...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCAATTGCAGGGGTGCATaGGAGAGGAGCTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLNCRGA*ERSWDR
Trigger: CCTATCCCAGCTCCTCTCCCATGCACCCCTGCAATT...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGGGGATGGTGGGGAGGTaGAAAAAGAGGTGGTACACA +
Preference number: 4 (lower is better)
Translates to: HQSLGHQLECQTVDGDSRGMVGR*KKRWYT
Trigger: TGTGTACCACCTCTTTTTCCACCTCCCCACCATCCC...CCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp TCCCAAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGGGATGGTGGGGAGGTaGAAAAAGAGGTGGTACACA +
Preference number: 4 (lower is better)
Translates to: SQAQLKVMAETLHRWSPGGMVGR*KKRWYT
Trigger: TGTGTACCACCTCTTTTTCCACCTCCCCACCATCCC...ACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAATCAGCCTGGGTACCATaGACAGGCTGGTTGGGAGCA +
Preference number: 4 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKSAWVP*TGWLGA
Trigger: TGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGA...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCACTACTGGAGGGTGTaGCAGCACAGTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSHYWRV*QHSGFC
Trigger: ACAGAACCCACTGTGCTGCCACACCCTCCAGTAGTG...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACCACTACTGGAGGGTGTaGCAGCACAGTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNHYWRV*QHSGFC
Trigger: ACAGAACCCACTGTGCTGCCACACCCTCCAGTAGTG...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp AACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGCTTTTCGGACAAAGATaGTCTCCAAGACATCGTGAG +
Preference number: 4 (lower is better)
Translates to: NLSLGSASHACALGQSQELFGQR*SPRHRE
Trigger: CTCACGATGTCTTGGAGACCATCTTTGTCCGAAAAG...CTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGCCAGCTCCAAATTCTTaGGAGCAAACATGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRPAPNS*EQTWQR
Trigger: CCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGG...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTGGAGGATTCACCATTaGATCGGTATCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREWRIHH*IGILQL
Trigger: GAGCTGGAGGATACCGATCCAATGGTGAATCCTCCA...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCTGGAGGATTCACCATTaGATCGGTATCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGWRIHH*IGILQL
Trigger: GAGCTGGAGGATACCGATCCAATGGTGAATCCTCCA...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACAGGAGATTCAGTCTCTaGGGAATCTGGAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHRRFSL*GIWRIH
Trigger: GTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCT...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTGAGTGCAGGCTGCCCTaGAGAGGAGATTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSECRLP*RGDSVS
Trigger: AGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTC...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TCTATCATAACAAAGTCATCATGGGTATTGCCACTGCTGCCCCCGCTGGAGCCAGAGTGCAGGCTGCCCTaGAGAGGAGATTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SIITKSSWVLPLLPPLEPECRLP*RGDSVS
Trigger: AGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTC...TGGCTCCAGCGGGGGCAGCAGTGGCAATACCCATGATGACTTTGTTATGATAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR CCA 90 bp AGTCTGTGGGGGATTAGTGACTCTGGCTCAGGAAGAACAATGACTAGCGCACCAGAGTGCAGGCTGCCCTaGAGAGGAGATTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SLWGISDSGSGRTMTSAPECRLP*RGDSVS
Trigger: AGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTC...TGGTGCGCTAGTCATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS-3UTR CCA 90 bp GGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGGGAGACTCTTGGCCACCAGCTaGAATGTCAAACAGTGGATG +
Preference number: 4 (lower is better)
Translates to: GLPGLPEWSQSLCRNCGRLLATS*NVKQWM
Trigger: CATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAG...TCTCCCACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCCACACCAATCTCTTaGCCACCAGCTGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPARESTPIS*PPAGMS
Trigger: TGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGA...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp GGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGGGAGATCGCTGTCTGTATGGTaGGAAGATCCTCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLPGLPEWSQSLCRNCGRSLSVW*EDPQSS
Trigger: GCTGCTTTGAGGATCTTCCCACCATACAGACAGCGA...TCTCCCACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTGGCCAGCCCTCTTCTTaGATCTCGCTGTCTGTATGG +
Preference number: 4 (lower is better)
Translates to: RGGSGFGVLILGRQACHIGQPSS*ISLSVW
Trigger: CCATACAGACAGCGAGATCCAAGAAGAGGGCTGGCC...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAAGCACCCAGGACTTCCTaGGCTGCCAGAATGGAGTCA +
Preference number: 4 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKAPRTS*AARMES
Trigger: TGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTGC...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACAGTCAGCCTTGTATGTaGGAACAGTGTCACATGCAG +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHSQPCM*EQCHMQ
Trigger: CTGCATGTGACACTGTTCCCACATACAAGGCTGACT...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTTGCTGCCTCAGACAATaGCTAGGCCTTTCCATGCAA +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTCCLRQ*LGLSMQ
Trigger: TTGCATGGAAAGGCCTAGCCATTGTCTGAGGCAGCA...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTAGGGACTCTGACACCTaGAGACAAACAGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: RGGSGFGVLILGRQACHIRDSDT*RQTAGP
Trigger: GGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCT...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
3UTR CAA 72 bp GTCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTaGGCCACCAGCTGGAATGTCAAACAGTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: VSFLFLRLHTNL*ATSWNVKQWMV
Trigger: CACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGGACGGTCCACAAAGTaGTCAATAATAATCCCCATG +
Preference number: 4 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHGRSTK*SIIIPM
Trigger: CATGGGGATTATTATTGATCACTTTGTGGACCGTCC...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTGTGGTACACACTTCTTaGGAGTCTTCTACAGACGGG +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSVVHTS*ESSTDG
Trigger: CCCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCAC...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR TCA 90 bp AGACACTTGAGGTCTTTCTGCGCTTCACAACGCACCACTCTCCCCTTTCCCAGAGGAACCATCAGCTGGTaGGGGTGTGTAGCATTTAAG +
Preference number: 4 (lower is better)
Translates to: RHLRSFCASQRTTLPFPRGTISW*GCVAFK
Trigger: CTTAAATGCTACACACCCTCACCAGCTGATGGTTCC...TCTGGGAAAGGGGAGAGTGGTGCGTTGTGAAGCGCAGAAAGACCTCAAGTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR TCA 90 bp ACTGTCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGTCCCTCACTGCTGTTTaGTACGGTTTCAGTATCCTC +
Preference number: 4 (lower is better)
Translates to: TVSFLFLRLHTNLLATSWSLTAV*YGFSIL
Trigger: GAGGATACTGAAACCGTATCAAACAGCAGTGAGGGA...CCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp AAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGAAACACAGATGGCCCTGCTaGGGGCTTTTTCGTACGAAG +
Preference number: 4 (lower is better)
Translates to: KLSSKSWLRLFTDGALVKHRWPC*GLFRTK
Trigger: CTTCGTACGAAAAAGCCCTCAGCAGGGCCATCTGTG...TTTCACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp TTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGAGTGGTTTTGGAGTTCTaGTCTTGGGTAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FCDSTPISWPPAGMSNSGVVLEF*SWVGRP
Trigger: AGGCCTGCCTACCCAAGATCAGAACTCCAAAACCAC...TCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCGTGGTTTTGGAGTTCTaGTCTTGGGTAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLVVLEF*SWVGRP
Trigger: AGGCCTGCCTACCCAAGATCAGAACTCCAAAACCAC...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp GGCCTTGGGGATAAACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGGTGAGGCTAGGCACTTaGCTTATTCAAGTAACAATA +
Preference number: 4 (lower is better)
Translates to: GLGDKPEPGFSKPRMCSGVRLGT*LIQVTI
Trigger: TATTGTTACTTGAATAAGTCAAGTGCCTAGCCTCAC...CCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTTTATCCCCAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCCCCTTGAATACATTTTaGAGTGTAGCTCGGTATTTC +
Preference number: 4 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAPLNTF*SVARYF
Trigger: GAAATACCGAGCTACACTTCAAAATGTATTCAAGGG...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGACAGGAGTAGGGGTCTaGAAATGTGCCTTTGTGACA +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPARETGVGV*KCAFVT
Trigger: TGTCACAAAGGCACATTTTCAGACCCCTACTCCTGT...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528494.5
CDS-3UTR GCA 90 bp CTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGACTGGCGCTCTTCAGTaGTTCCCTCACTGGTTAAGC +
Preference number: 4 (lower is better)
Translates to: LSATPHQSLGHQLECQTVTGALQ*FPHWLS
Trigger: GCTTAACCAGTGAGGGAAGCACTGAAGAGCGCCAGT...CACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTAGGAATCTGCGAAGCTaGGGCACAAAGAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSRNLRS*GTKSGS
Trigger: GGAACCACTCTTTGTGCCGCAGCTTCGCAGATTCCT...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359513.8
ENST00000528494.5
CDS-3UTR GCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCAAGATGATGAACGAGTaGAAATCTTTTCACCAAGCC +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSKMMNE*KSFHQA
Trigger: GGCTTGGTGAAAAGATTTGCACTCGTTCATCATCTT...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCAATATGACATATTCATaGCCTTGTTTCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LTAATESPGGPRVGTSGSNMTYS*PCFLES
Trigger: GCTCTCCAGGAAACAAGGGCATGAATATGTCATATT...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTTTCTGTCAGAAGGGGTaGAGGTTGCCAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSFCQKG*RLPVSP
Trigger: AGGAGAGACTGGCAACCTGCACCCCTTCTGACAGAA...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTGCCAGATTCTGTCAGAAGGGGTaGAGGTTGCCAGTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSGFGVLILGRQACHIARFCQKG*RLPVSP
Trigger: AGGAGAGACTGGCAACCTGCACCCCTTCTGACAGAA...TCTGGCAATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCAGGCCCGTCCCTCACTaGTGTTTGATACGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLRPVPH*CLIRFQ
Trigger: CTGAAACCGTATCAAACAGCAGTGAGGGACGGGCCT...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GGGAGATGTAAGGCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTACTGGAGCCATCTGAGTaGAGGCTGCCCTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRCKALTRNTQLSKVKPLLEPSE*RLPWRG
Trigger: TCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAG...TAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGCCTTACATCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp TTCAGTCTCTGGGGAATCTGGAGGATTCACCTGTTTCATAGCAAGGCAGGATTACTGGAGCCATCTGAGTaGAGGCTGCCCTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: FSLWGIWRIHLFHSKAGLLEPSE*RLPWRG
Trigger: TCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAG...TAATCCTGCCTTGCTATGAAACAGGTGAATCCTCCAGATTCCCCAGAGACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR GCA 90 bp AACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGCCTAGAGATTCAGGGTaGCATTTTTATTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: NLSLGSASHACALGQSQEPRDSG*HFYFPW
Trigger: CCATGGGAAATAAAAATGGCACCCTGAATCTCTAGG...CTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACTCACCAAGCCGAGCCTaGACAATCACTTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNSPSRA*TITWTV
Trigger: GACTGTCCAAGTGATTGTCCAGGCTCGGCTTGGTGA...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTGCCAGATCACCAAGCCGAGCCTaGACAATCACTTGGACAGTC +
Preference number: 4 (lower is better)
Translates to: GSGFGVLILGRQACHIARSPSRA*TITWTV
Trigger: GACTGTCCAAGTGATTGTCCAGGCTCGGCTTGGTGA...TCTGGCAATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTAAATCTCCACACACATaGACCTCCCGACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSKSPHT*TSRLQA
Trigger: TGCCTGCAGTCGGGAGGTCCATGTGTGTGGAGATTT...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGAAAATCTCCACACACATaGACCTCCCGACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: FCDSTPISWPPAGMSNSGKSPHT*TSRLQA
Trigger: TGCCTGCAGTCGGGAGGTCCATGTGTGTGGAGATTT...TCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGGGAGAGCCTATAGGCTaGTGTCACCCTAGTTATAGC +
Preference number: 4 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMGEPIG*CHPSYS
Trigger: GCTATAACTAGGGTGACACCAGCCTATAGGCTCTCC...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TCCCAAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGGAGAGCCTATAGGCTaGTGTCACCCTAGTTATAGC +
Preference number: 4 (lower is better)
Translates to: SQAQLKVMAETLHRWSPGGEPIG*CHPSYS
Trigger: GCTATAACTAGGGTGACACCAGCCTATAGGCTCTCC...ACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTCATGCCCTTGTTTCCTaGAGAGCCTATAGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RGGSGFGVLILGRQACHIHALVS*RAYRLV
Trigger: CACCAGCCTATAGGCTCTCCAGGAAACAAGGGCATG...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GAAGCCAATCCAGCTGGTAAACCCCAGGGCAGTGTAGAGAACCTGGGATTAGAGCCAACACGAACTGTCTaGAAGCCTTCTCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: EANPAGKPQGSVENLGLEPTRTV*KPSPKP
Trigger: TGGCTTAGGAGAAGGCTTCCAGACAGTTCGTGTTGG...CTCTAATCCCAGGTTCTCTACACTGCCCTGGGGTTTACCAGCTGGATTGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCCAACACGAACTGTCTaGAAGCCTTCTCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSPTRTV*KPSPKP
Trigger: TGGCTTAGGAGAAGGCTTCCAGACAGTTCGTGTTGG...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTAATCCCCATGATAGGTaGGGTCCTCTCAAATTGCCT +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTNPHDR*GPLKLP
Trigger: AGGCAATTTGAGAGGACCCCACCTATCATGGGGATT...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAAATCCCCATGATAGGTaGGGTCCTCTCAAATTGCCT +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPNPHDR*GPLKLP
Trigger: AGGCAATTTGAGAGGACCCCACCTATCATGGGGATT...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGAATCCCCATGATAGGTaGGGTCCTCTCAAATTGCCT +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPARENPHDR*GPLKLP
Trigger: AGGCAATTTGAGAGGACCCCACCTATCATGGGGATT...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAGTATCCTCACTACTaGAGGGTGTGGCAGCACAGT +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLQYPHY*RVWQHS
Trigger: ACTGTGCTGCCACACCCTCCAGTAGTGAGGATACTG...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGCTTTTCGGACAAAGATaGTCTCCAAGACATCGTGAG +
Preference number: 4 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRLFGQR*SPRHRE
Trigger: CTCACGATGTCTTGGAGACCATCTTTGTCCGAAAAG...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGGGAGACTCGTCAGGGTCACCTaGTTAATGGGTTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: GLPGLPEWSQSLCRNCGRLVRVT*LMGLLT
Trigger: TGTCAACAAACCCATTAACCAGGTGACCCTGACGAG...TCTCCCACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCCTCGTCAGGGTCACCTaGTTAATGGGTTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGLVRVT*LMGLLT
Trigger: TGTCAACAAACCCATTAACCAGGTGACCCTGACGAG...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCACCAGCTCCAAATTCTTaGGAGCAAACATGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPPAPNS*EQTWQR
Trigger: CCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGG...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TCCCAAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTTGGAGGATTCACCATTaGATCGGTATCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: SQAQLKVMAETLHRWSPGWRIHH*IGILQL
Trigger: GAGCTGGAGGATACCGATCCAATGGTGAATCCTCCA...ACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAAGTCTCTGGGGAATCTaGAGGATTCACCATTGGATC +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPSLWGI*RIHHWI
Trigger: GATCCAATGGTGAATCCTCCAGATTCCCCAGAGACT...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CACCCAGGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTAGGAGATTCAGTCTCTaGGGAATCTGGAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: HPGLPGLPEWSQSLCRNCRRFSL*GIWRIH
Trigger: GTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCT...ACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTAGGAGATTCAGTCTCTaGGGAATCTGGAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTRRFSL*GIWRIH
Trigger: GTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCT...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCCGAGGGGCCATGGTTTATAGTCTGTGGGGGATTAGTGACTCTGGCTCAGGAAAGGAGATTCAGTCTCTaGGGAATCTGGAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: AEGPWFIVCGGLVTLAQERRFSL*GIWRIH
Trigger: GTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCT...TTCCTGAGCCAGAGTCACTAATCCCCCACAGACTATAAACCATGGCCCCTCGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS-3UTR CCA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAAGAGTGCAGGCTGCCCTaGAGAGGAGATTCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKECRLP*RGDSVS
Trigger: AGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTC...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACGCTGCTCAGCTGAGGTaGGTTCTGAAACTCCCGATA +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNAAQLR*VLKLPI
Trigger: TATCGGGAGTTTCAGAACCCACCTCAGCTGAGCAGC...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGCTTCAGGGGTGGGAGTaGTTTTGGAGTTCTGATCTT +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPARELQGWE*FWSSDL
Trigger: AAGATCAGAACTCCAAAACCACTCCCACCCCTGAAG...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp CACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGTCGCTGTCTGTATGGTaGGAAGATCCTCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: HQSLGHQLECQTVDGDSRSLSVW*EDPQSS
Trigger: GCTGCTTTGAGGATCTTCCCACCATACAGACAGCGA...CCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTTCGCTGTCTGTATGGTaGGAAGATCCTCAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSSLSVW*EDPQSS
Trigger: GCTGCTTTGAGGATCTTCCCACCATACAGACAGCGA...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp AAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGAAACCTGGGCTGCCAGAATaGAGTCAGTCACTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KLSSKSWLRLFTDGALVKPGLPE*SQSLCR
Trigger: TCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGG...TTTCACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAAGTACCCAGGCAGTTaGGGGACACACACAACATCC +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNKYPGS*GTHTTS
Trigger: GGATGTTGTGTGTGTCCCCCAACTGCCTGGGTACTT...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGAAGTACCCAGGCAGTTaGGGGACACACACAACATCC +
Preference number: 4 (lower is better)
Translates to: LFLRLHTNLLATSWNVKQKYPGS*GTHTTS
Trigger: GGATGTTGTGTGTGTCCCCCAACTGCCTGGGTACTT...CTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp AAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGAAAGCTAACACTTCTTGGTaGCAGCAGCAGCACGCAGAG +
Preference number: 4 (lower is better)
Translates to: KLSSKSWLRLFTDGALVKANTSW*QQQHAE
Trigger: CTCTGCGTGCTGCTGCTGCCACCAAGAAGTGTTAGC...TTTCACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTTCTGCTAACACTTCTTaGTGGCAGCAGCAGCACGCA +
Preference number: 4 (lower is better)
Translates to: RGGSGFGVLILGRQACHISANTS*WQQQHA
Trigger: TGCGTGCTGCTGCTGCCACCAAGAAGTGTTAGCAGA...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCCATGGTTTATAGTCTGTGGGGGATTAGTGACTCTGGCTCAGGAAGAACAATGCGGTGGGCTCACCATTaGATCGGTATCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: AMVYSLWGISDSGSGRTMRWAHH*IGILQL
Trigger: GAGCTGGAGGATACCGATCCAATGGTGAGCCCACCG...CATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACTATAAACCATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS-3UTR TCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCATTCTGTCCTGGGAATTaGGATCAGTTTCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPFCPGN*DQFPLP
Trigger: AGGCAATGGAAACTGATCTCAATTCCCAGGACAGAA...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
CDS-3UTR TCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCTTCTGTCCTGGGAATTaGGATCAGTTTCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGFCPGN*DQFPLP
Trigger: AGGCAATGGAAACTGATCTCAATTCCCAGGACAGAA...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
CDS-3UTR TCA 90 bp CTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGGACTTCAGCAGCAATaGCAGTCTGTTGTACACCGT +
Preference number: 4 (lower is better)
Translates to: LSATPHQSLGHQLECQTVGLQQQ*QSVVHR
Trigger: ACGGTGTACAACAGACTGTCATTGCTGCTGAAGTCC...CACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGGACGGTCCACAAAGTaGTCAATAATAATCCCCATG +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPGRSTK*SIIIPM
Trigger: CATGGGGATTATTATTGATCACTTTGTGGACCGTCC...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp ACTGTCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGGGACGGTCCACAAAGTaGTCAATAATAATCCCCATG +
Preference number: 4 (lower is better)
Translates to: TVSFLFLRLHTNLLATSWGRSTK*SIIIPM
Trigger: CATGGGGATTATTATTGATCACTTTGTGGACCGTCC...CCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCGGAACCATCAGCTGGTaGGGGTGTGTAGCATTTAAG +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLGTISW*GCVAFK
Trigger: CTTAAATGCTACACACCCTCACCAGCTGATGGTTCC...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000526508.5
ENST00000528494.5
CDS-3UTR TCA 90 bp GGGAGATGTAAGGCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTATCAAACAGTGGATGGTaGCAGCAGGCAGGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: GRCKALTRNTQLSKVKPLSNSGW*QQAGKG
Trigger: CCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGA...TAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGCCTTACATCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTTGCCAGTGCCTTCTTTaGTTCATGTGTAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSCQCLL*FMCNLW
Trigger: CCAGAGGTTACACATGAAGCAAAGAAGGCACTGGCA...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAGCTGTCCTGCCAGTaGCTTCTTTGCTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLQLSCQ*LLCFMC
Trigger: ACACATGAAGCAAAGAAGGCACTGGCAGGACAGCTG...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp ATTCTCCAACTGAATATTCAAATTCAAGCCCCTGATAGGGGACCAGGGAAAGAGCATGGGTATTGCCACTaGTGCCCCCGCTGGAGCCAT +
Preference number: 4 (lower is better)
Translates to: ILQLNIQIQAPDRGPGKEHGYCH*CPRWSH
Trigger: ATGGCTCCAGCGGGGGCAGCAGTGGCAATACCCATG...CTCTTTCCCTGGTCCCCTATCAGGGGCTTGAATTTGAATATTCAGTTGGAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR GCA 90 bp GGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTGCCAGATATCTATGGAGAGGCTaGTCAGCTGAGGTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GSGFGVLILGRQACHIARYLWRG*SAEVGS
Trigger: AGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATA...TCTGGCAATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp TACAAACCCGTAAGCCGAGGGGCCATGGTTTATAGTCTGTGGGGGATTAGTGACTATCTATGGAGAGGCTaGTCAGCTGAGGTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: YKPVSRGAMVYSLWGISDYLWRG*SAEVGS
Trigger: AGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATA...GTCACTAATCCCCCACAGACTATAAACCATGGCCCCTCGGCTTACGGGTTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR GCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTTATCTATGGAGAGGCTaGTCAGCTGAGGTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSYLWRG*SAEVGS
Trigger: AGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATA...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCATTCAGCCATGGACTGTaGTCCAATATCTATGGAGAG +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPFSHGL*SNIYGE
Trigger: CTCTCCATAGATATTGGAGCACAGTCCATGGCTGAA...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACCAAGGATACTTTTACTaGAGGGTTTCCACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHQGYFY*RVSTKA
Trigger: TGCCTTTGTGGAAACCCTGCAGTAAAAGTATCCTTG...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp CACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGTCTCCTTCCTCTTTCTaGGACTCCACACCAATCTCT +
Preference number: 4 (lower is better)
Translates to: HQSLGHQLECQTVDGDSRSPSSF*DSTPIS
Trigger: AGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA...CCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTTGGAGTCAGTCACTCTaGAGAAACTGTGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSWSQSL*RNCGRC
Trigger: ACATCTCCCACAGTTTCTGCAGAGTGACTGACTCCA...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTGGGAACAGTGTCACATaGAGTATACTAACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTGNSVT*SILTSS
Trigger: GCTGCTTGTTAGTATACTGCATGTGACACTGTTCCC...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGGGAGAGTAGATGCCAAAGATTaGTGCCTCAGACAATGGCTA +
Preference number: 4 (lower is better)
Translates to: GLPGLPEWSQSLCRNCGRVDAKD*CLRQWL
Trigger: TAGCCATTGTCTGAGGCAGCAATCTTTGGCATCTAC...TCTCCCACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGATATTTCCAGCTCCATaGAATCTCCCTCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRIFPAP*NLPQKS
Trigger: AGACTTCTGAGGGAGATTCCATGGAGCTGGAAATAT...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACATATTTCCAGCTCCATaGAATCTCCCTCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHIFPAP*NLPQKS
Trigger: AGACTTCTGAGGGAGATTCCATGGAGCTGGAAATAT...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTGGAGAGCCTATAGGCTaGTGTCACCCTAGTTATAGC +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSGEPIG*CHPSYS
Trigger: GCTATAACTAGGGTGACACCAGCCTATAGGCTCTCC...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTGCCAGAGGAGAGCCTATAGGCTaGTGTCACCCTAGTTATAGC +
Preference number: 4 (lower is better)
Translates to: GSGFGVLILGRQACHIARGEPIG*CHPSYS
Trigger: GCTATAACTAGGGTGACACCAGCCTATAGGCTCTCC...TCTGGCAATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACACGAACTGTCTaGAAGCCTTCTCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSPTRTV*KPSPKP
Trigger: TGGCTTAGGAGAAGGCTTCCAGACAGTTCGTGTTGG...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCCAACACGAACTGTCTaGAAGCCTTCTCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLPTRTV*KPSPKP
Trigger: TGGCTTAGGAGAAGGCTTCCAGACAGTTCGTGTTGG...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTCCAACACGAACTGTCTaGAAGCCTTCTCCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: RGGSGFGVLILGRQACHIPTRTV*KPSPKP
Trigger: TGGCTTAGGAGAAGGCTTCCAGACAGTTCGTGTTGG...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGAGGTGGAAAAAGAGGTaGTACACACTTCTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRRWKKR*YTLLES
Trigger: ACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCT...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTATCCTCACTACTaGAGGGTGTGGCAGCACAGT +
Preference number: 4 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKQYPHY*RVWQHS
Trigger: ACTGTGCTGCCACACCCTCCAGTAGTGAGGATACTG...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCCTTTTCGGACAAAGATaGTCTCCAAGACATCGTGAG +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGLFGQR*SPRHRE
Trigger: CTCACGATGTCTTGGAGACCATCTTTGTCCGAAAAG...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTCTTGGGAGCAAACATaGCAAAGGGTATATCCAAAC +
Preference number: 4 (lower is better)
Translates to: RRFFPSPRPARESSPTGHSWEQT*QRVYPN
Trigger: GTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGA...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp CACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCCAGCTCCAAATTCTTaGGAGCAAACATGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: HQSLGHQLECQTVDGDSRPAPNS*EQTWQR
Trigger: CCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGG...CCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGACCAAGTCTTCAGCCATaGACTGTGCTCCAATATCTA +
Preference number: 4 (lower is better)
Translates to: SLGHQLECQTVDGDSRQGPSLQP*TVLQYL
Trigger: TAGATATTGGAGCACAGTCCATGGCTGAAGACTTGG...TCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGCCAAGTCTTCAGCCATaGACTGTGCTCCAATATCTA +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREPSLQP*TVLQYL
Trigger: TAGATATTGGAGCACAGTCCATGGCTGAAGACTTGG...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp ACTGTCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGCCAAGTCTTCAGCCATaGACTGTGCTCCAATATCTA +
Preference number: 4 (lower is better)
Translates to: TVSFLFLRLHTNLLATSWPSLQP*TVLQYL
Trigger: TAGATATTGGAGCACAGTCCATGGCTGAAGACTTGG...CCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGACAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTTGGAATGTCAAACAGTaGATGGTGACAGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSWNVKQ*MVTAGR
Trigger: CCTGCCTGCTGTCACCATCCACTGTTTGACATTCCA...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTCTCTTGGCCACCAGCTaGAATGTCAAACAGTGGATG +
Preference number: 4 (lower is better)
Translates to: RGGSGFGVLILGRQACHILLATS*NVKQWM
Trigger: CATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAG...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp CTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGTCCACACCAATCTCTTaGCCACCAGCTGGAATGTCA +
Preference number: 4 (lower is better)
Translates to: LSATPHQSLGHQLECQTVSTPIS*PPAGMS
Trigger: TGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGA...CACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGATCTCGCTGTCTGTATaGTGGGAAGATCCTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMISLSV*WEDPQS
Trigger: GCTTTGAGGATCTTCCCACCATACAGACAGCGAGAT...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTTGCTGCCTCAGACAATaGCTAGGCCTTTCCATGCAA +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSCCLRQ*LGLSMQ
Trigger: TTGCATGGAAAGGCCTAGCCATTGTCTGAGGCAGCA...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp AATGCTGGCTACAAACCCGTAAGCCGAGGGGCCATGGTTTATAGTCTGTGGGGGAGTCTCTGGGGAATCTaGAGGATTCACCTGTTTCAT +
Preference number: 4 (lower is better)
Translates to: NAGYKPVSRGAMVYSLWGSLWGI*RIHLFH
Trigger: ATGAAACAGGTGAATCCTCCAGATTCCCCAGAGACT...CCCCCACAGACTATAAACCATGGCCCCTCGGCTTACGGGTTTGTAGCCAGCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR CCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCACAGTAAACACACACTaGGATGGTGGGGAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLTVNTH*DGGEVE
Trigger: TTCCACCTCCCCACCATCCCAGTGTGTGTTTACTGT...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528494.5
CDS-3UTR TCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTTCTGTCCTGGGAATTaGGATCAGTTTCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMFCPGN*DQFPLP
Trigger: AGGCAATGGAAACTGATCTCAATTCCCAGGACAGAA...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTTCCCTCACTGCTGTTTaGTACGGTTTCAGTATCCTC +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSSLTAV*YGFSIL
Trigger: GAGGATACTGAAACCGTATCAAACAGCAGTGAGGGA...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp GGACAAGAGGAAGAGAACTTTGCTGTGACTCCAAGTGACAAAATCCTAGAGATTAGGGGTGGGAGCAGCTaGTGCATGGGAGGCTGCTTA +
Preference number: 4 (lower is better)
Translates to: GQEEENFAVTPSDKILEIRGGSS*CMGGCL
Trigger: TAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCT...AATCTCTAGGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTTCCTCTTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTGCTGTGACTCCAAGTaGCAAAATCCTAGAGATTCA +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPARECCDSK*QNPRDS
Trigger: TGAATCTCTAGGATTTTGTCACTTGGAGTCACAGCA...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCATGCTGTGACTCCAAGTaGCAAAATCCTAGAGATTCA +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPCCDSK*QNPRDS
Trigger: TGAATCTCTAGGATTTTGTCACTTGGAGTCACAGCA...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAAAGAGAACTTTGCTGTaGCTCCAAGTGACAAAATCC +
Preference number: 4 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPKRTLL*LQVTKS
Trigger: GGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTT...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CACCCAGGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTAAGAGAACTTTGCTGTaGCTCCAAGTGACAAAATCC +
Preference number: 4 (lower is better)
Translates to: HPGLPGLPEWSQSLCRNCKRTLL*LQVTKS
Trigger: GGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTT...ACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CACCCAGGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTAAAGAGAGCAGTAGCTaGAATATGGGGGCATCAATA +
Preference number: 4 (lower is better)
Translates to: HPGLPGLPEWSQSLCRNCKESSS*NMGASI
Trigger: TATTGATGCCCCCATATTTCAGCTACTGCTCTCTTT...ACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGAAGATGATGAACGAGTaGAAATCTTTTCACCAAGCC +
Preference number: 4 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRKMMNE*KSFHQA
Trigger: GGCTTGGTGAAAAGATTTGCACTCGTTCATCATCTT...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTTGCCAGTGCCTTCTTTaGTTCATGTGTAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: RGGSGFGVLILGRQACHICQCLL*FMCNLW
Trigger: CCAGAGGTTACACATGAAGCAAAGAAGGCACTGGCA...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp CTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGCCAGTGCCTTCTTTaGTTCATGTGTAACCTCTGG +
Preference number: 4 (lower is better)
Translates to: LFLRLHTNLLATSWNVKQCQCLL*FMCNLW
Trigger: CCAGAGGTTACACATGAAGCAAAGAAGGCACTGGCA...CTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp CAGGAAGTAAAGGGGACAATGAAGAGAGCTAAGGGACTCCTTCCTTCTTCCTCCTATCTATGGAGAGGCTaGTCAGCTGAGGTGGGTTCT +
Preference number: 4 (lower is better)
Translates to: QEVKGTMKRAKGLLPSSSYLWRG*SAEVGS
Trigger: AGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATA...GGAGGAAGAAGGAAGGAGTCCCTTAGCTCTCTTCATTGTCCCCTTTACTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp GAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACTCAAGGATACTTTTACTaGAGGGTTTCCACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: EGSSHLQGQHVSLLQLGTQGYFY*RVSTKA
Trigger: TGCCTTTGTGGAAACCCTGCAGTAAAAGTATCCTTG...AGTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR GCA 90 bp CTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGACAAAAAGGGGGTGCTaGTGGGACTCAAGGATACTT +
Preference number: 4 (lower is better)
Translates to: LFLRLHTNLLATSWNVKQTKRGC*WDSRIL
Trigger: AAGTATCCTTGAGTCCCAGCAGCACCCCCTTTTTGT...CTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTTCTCCTTCCTCTTTCTaGGACTCCACACCAATCTCT +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSSPSSF*DSTPIS
Trigger: AGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCTGGAGTCAGTCACTCTaGAGAAACTGTGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLWSQSL*RNCGRC
Trigger: ACATCTCCCACAGTTTCTGCAGAGTGACTGACTCCA...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GGGAGATGTAAGGCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTACAGCTGAGAACCACCTaGTCCACTGAAGCACAGCTG +
Preference number: 4 (lower is better)
Translates to: GRCKALTRNTQLSKVKPLQLRTT*STEAQL
Trigger: CAGCTGTGCTTCAGTGGAGCAGGTGGTTCTCAGCTG...TAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGCCTTACATCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGCCTGGACAATCACTTaGACAGTCTTGAGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LSATPHQSLGHQLECQTVAWTIT*TVLRAK
Trigger: TTTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGC...CACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp CAGGAAGTAAAGGGGACAATGAAGAGAGCTAAGGGACTCCTTCCTTCTTCCTCCGGAGAGCCTATAGGCTaGTGTCACCCTAGTTATAGC +
Preference number: 4 (lower is better)
Translates to: QEVKGTMKRAKGLLPSSSGEPIG*CHPSYS
Trigger: GCTATAACTAGGGTGACACCAGCCTATAGGCTCTCC...GGAGGAAGAAGGAAGGAGTCCCTTAGCTCTCTTCATTGTCCCCTTTACTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GGGAGATGTAAGGCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAAATTGCAGGGGTGCATaGGAGAGGAGCTGGGATAGG +
Preference number: 4 (lower is better)
Translates to: GRCKALTRNTQLSKVKPLNCRGA*ERSWDR
Trigger: CCTATCCCAGCTCCTCTCCCATGCACCCCTGCAATT...TAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGCCTTACATCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGCTTTTCGGACAAAGATaGTCTCCAAGACATCGTGAG +
Preference number: 4 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMLFGQR*SPRHRE
Trigger: CTCACGATGTCTTGGAGACCATCTTTGTCCGAAAAG...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACCTCGTCAGGGTCACCTaGTTAATGGGTTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNLVRVT*LMGLLT
Trigger: TGTCAACAAACCCATTAACCAGGTGACCCTGACGAG...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTGGGAGCAAACATaGCAAAGGGTATATCCAAAC +
Preference number: 4 (lower is better)
Translates to: AEGFFVRRFFPSPRPARESWEQT*QRVYPN
Trigger: GTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGA...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp AGTCTGTGGGGGATTAGTGACTCTGGCTCAGGAAGAACAATGACTAGCGCACCACCAGCTCCAAATTCTTaGGAGCAAACATGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SLWGISDSGSGRTMTSAPPAPNS*EQTWQR
Trigger: CCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGG...TGGTGCGCTAGTCATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS-3UTR CCA 90 bp CAGGAAGTAAAGGGGACAATGAAGAGAGCTAAGGGACTCCTTCCTTCTTCCTCCTGGAGGATTCACCATTaGATCGGTATCCTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: QEVKGTMKRAKGLLPSSSWRIHH*IGILQL
Trigger: GAGCTGGAGGATACCGATCCAATGGTGAATCCTCCA...GGAGGAAGAAGGAAGGAGTCCCTTAGCTCTCTTCATTGTCCCCTTTACTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp CTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGAGTCTCTGGGGAATCTaGAGGATTCACCATTGGATC +
Preference number: 4 (lower is better)
Translates to: LFLRLHTNLLATSWNVKQSLWGI*RIHHWI
Trigger: GATCCAATGGTGAATCCTCCAGATTCCCCAGAGACT...CTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTAGTCTCTGGGGAATCTaGAGGATTCACCATTGGATC +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSSLWGI*RIHHWI
Trigger: GATCCAATGGTGAATCCTCCAGATTCCCCAGAGACT...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp TTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGAAGGAGATTCAGTCTCTaGGGAATCTGGAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: FCDSTPISWPPAGMSNSGRRFSL*GIWRIH
Trigger: GTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCT...TCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp AGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCTGTTTCATAGCAAGGCAGCTGCTCAGCTGAGGTaGGTTCTGAAACTCCCGATA +
Preference number: 4 (lower is better)
Translates to: RRFSLWGIWRIHLFHSKAAAQLR*VLKLPI
Trigger: TATCGGGAGTTTCAGAACCCACCTCAGCTGAGCAGC...TGCCTTGCTATGAAACAGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR CCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGCCAAGTCTTCAGCCATaGACTGTGCTCCAATATCTA +
Preference number: 4 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMPSLQP*TVLQYL
Trigger: TAGATATTGGAGCACAGTCCATGGCTGAAGACTTGG...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACCTTCAGGGGTGGGAGTaGTTTTGGAGTTCTGATCTT +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNLQGWE*FWSSDL
Trigger: AAGATCAGAACTCCAAAACCACTCCCACCCCTGAAG...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTCAGCCTTGTATGTaGGAACAGTGTCACATGCAG +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNSQPCM*EQCHMQ
Trigger: CTGCATGTGACACTGTTCCCACATACAAGGCTGACT...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAGTCAGTTCCAGTAGGGACTCTGACACCTaGAGACAAACAGCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: ALTRNTQLSKVKPLVSSSRDSDT*RQTAGP
Trigger: GGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCT...ACTGGAACTGACTAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GAGAGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCTGTTTCATAGCAAGACTCGTAGTCAACGGTaGGCTCACCATTGGATCGGT +
Preference number: 4 (lower is better)
Translates to: ERRFSLWGIWRIHLFHSKTRSQR*AHHWIG
Trigger: ACCGATCCAATGGTGAGCCCACCGTTGACTACGAGT...CTTGCTATGAAACAGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR TCA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTTTCTGTCCTGGGAATTaGGATCAGTTTCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: GFFVRRFFPSPRPARESSFCPGN*DQFPLP
Trigger: AGGCAATGGAAACTGATCTCAATTCCCAGGACAGAA...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
CDS-3UTR TCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACGGACGGTCCACAAAGTaGTCAATAATAATCCCCATG +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNGRSTK*SIIIPM
Trigger: CATGGGGATTATTATTGATCACTTTGTGGACCGTCC...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp GAACTTAATGCTGGCTACAAACCCGTAAGCCGAGGGGCCATGGTTTATAGTCTGTCCCTCACTGCTGTTTaGTACGGTTTCAGTATCCTC +
Preference number: 4 (lower is better)
Translates to: ELNAGYKPVSRGAMVYSLSLTAV*YGFSIL
Trigger: GAGGATACTGAAACCGTATCAAACAGCAGTGAGGGA...CAGACTATAAACCATGGCCCCTCGGCTTACGGGTTTGTAGCCAGCATTAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR TCA 90 bp CACCCGACTCAAAACAGGCTTGCCCAGACACTTGAGGTCTTTCTGCGCTTCACATGCTGTGACTCCAAGTaGCAAAATCCTAGAGATTCA +
Preference number: 4 (lower is better)
Translates to: HPTQNRLAQTLEVFLRFTCCDSK*QNPRDS
Trigger: TGAATCTCTAGGATTTTGTCACTTGGAGTCACAGCA...TGTGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGCCTGTTTTGAGTCGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR TCA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCGTGAGGCTAGGCACTTaGCTTATTCAAGTAACAATA +
Preference number: 4 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGVRLGT*LIQVTI
Trigger: TATTGTTACTTGAATAAGTCAAGTGCCTAGCCTCAC...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GGACAAGAGGAAGAGAACTTTGCTGTGACTCCAAGTGACAAAATCCTAGAGATTAACCACCTGCTCCACTaGAGCACAGCTGCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: GQEEENFAVTPSDKILEINHLLH*STAAAS
Trigger: ACTGGCAGCAGCTGTGCTTCAGTGGAGCAGGTGGTT...AATCTCTAGGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTTCCTCTTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GCCATGGTTTATAGTCTGTGGGGGATTAGTGACTCTGGCTCAGGAAGAACAATGGCTCAGGAAGAACAATaGCTAGCGCACCATCTACTG +
Preference number: 4 (lower is better)
Translates to: AMVYSLWGISDSGSGRTMAQEEQ*LAHHLL
Trigger: CAGTAGATGGTGCGCTAGTCATTGTTCTTCCTGAGC...CATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACTATAAACCATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS-3UTR GCA 90 bp GCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAGTCAGTTCCAGTAGGAATCTGCGAAGCTaGGGCACAAAGAGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: ALTRNTQLSKVKPLVSSSRNLRS*GTKSGS
Trigger: GGAACCACTCTTTGTGCCGCAGCTTCGCAGATTCCT...ACTGGAACTGACTAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR GCA 90 bp GGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTGCCAGATTCAGCCATGGACTGTaGTCCAATATCTATGGAGAG +
Preference number: 4 (lower is better)
Translates to: GSGFGVLILGRQACHIARFSHGL*SNIYGE
Trigger: CTCTCCATAGATATTGGAGCACAGTCCATGGCTGAA...TCTGGCAATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp CTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGGGAACAGTGTCACATaGAGTATACTAACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: LSATPHQSLGHQLECQTVGNSVT*SILTSS
Trigger: GCTGCTTGTTAGTATACTGCATGTGACACTGTTCCC...CACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCGGGAACAGTGTCACATaGAGTATACTAACAAGCAGC +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLGNSVT*SILTSS
Trigger: GCTGCTTGTTAGTATACTGCATGTGACACTGTTCCC...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp ACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACGTAGATGCCAAAGATTaGTGCCTCAGACAATGGCTA +
Preference number: 4 (lower is better)
Translates to: TPHQSLGHQLECQTVDGDVDAKD*CLRQWL
Trigger: TAGCCATTGTCTGAGGCAGCAATCTTTGGCATCTAC...GTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CAGGAAGTAAAGGGGACAATGAAGAGAGCTAAGGGACTCCTTCCTTCTTCCTCCGCTGGCCTTAACAGTTaGTTTACTTCTCCCAAGCTC +
Preference number: 4 (lower is better)
Translates to: QEVKGTMKRAKGLLPSSSAGLNS*FTSPKL
Trigger: GAGCTTGGGAGAAGTAAAGCAACTGTTAAGGCCAGC...GGAGGAAGAAGGAAGGAGTCCCTTAGCTCTCTTCATTGTCCCCTTTACTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGAGGTGGAAAAAGAGGTaGTACACACTTCTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMRWKKR*YTLLES
Trigger: ACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCT...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTAGGTGGAAAAAGAGGTaGTACACACTTCTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSRWKKR*YTLLES
Trigger: ACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCT...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CCA 90 bp CTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGCTTTTCGGACAAAGATaGTCTCCAAGACATCGTGAG +
Preference number: 4 (lower is better)
Translates to: LFLRLHTNLLATSWNVKQLFGQR*SPRHRE
Trigger: CTCACGATGTCTTGGAGACCATCTTTGTCCGAAAAG...CTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCTTGGGAGCAAACATaGCAAAGGGTATATCCAAAC +
Preference number: 4 (lower is better)
Translates to: SPSSFCDSTPISWPPAGMSWEQT*QRVYPN
Trigger: GTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGA...CATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GAACTTAATGCTGGCTACAAACCCGTAAGCCGAGGGGCCATGGTTTATAGTCTGCCAGCTCCAAATTCTTaGGAGCAAACATGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: ELNAGYKPVSRGAMVYSLPAPNS*EQTWQR
Trigger: CCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGG...CAGACTATAAACCATGGCCCCTCGGCTTACGGGTTTGTAGCCAGCATTAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR CCA 90 bp GAACTTAATGCTGGCTACAAACCCGTAAGCCGAGGGGCCATGGTTTATAGTCTGAGGAGATTCAGTCTCTaGGGAATCTGGAGGATTCAC +
Preference number: 4 (lower is better)
Translates to: ELNAGYKPVSRGAMVYSLRRFSL*GIWRIH
Trigger: GTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCT...CAGACTATAAACCATGGCCCCTCGGCTTACGGGTTTGTAGCCAGCATTAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR CCA 90 bp AAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGAAAAGTCAGCCTTGTATGTaGGAACAGTGTCACATGCAG +
Preference number: 4 (lower is better)
Translates to: KLSSKSWLRLFTDGALVKSQPCM*EQCHMQ
Trigger: CTGCATGTGACACTGTTCCCACATACAAGGCTGACT...TTTCACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp AGTCTGTGGGGGATTAGTGACTCTGGCTCAGGAAGAACAATGACTAGCGCACCAATGGTTTATAGTCTGTaGGGGATTAGTGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLWGISDSGSGRTMTSAPMVYSL*GISDSG
Trigger: GCCAGAGTCACTAATCCCCCACAGACTATAAACCAT...TGGTGCGCTAGTCATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS-3UTR TCA 90 bp GCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAGTCAGTTCCAGTGGACTTCAGCAGCAATaGCAGTCTGTTGTACACCGT +
Preference number: 4 (lower is better)
Translates to: ALTRNTQLSKVKPLVSSSGLQQQ*QSVVHR
Trigger: ACGGTGTACAACAGACTGTCATTGCTGCTGAAGTCC...ACTGGAACTGACTAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGCCTAAGCCACTCAGCTaGACTTCTCCAAAATATATC +
Preference number: 4 (lower is better)
Translates to: LSATPHQSLGHQLECQTVPKPLS*TSPKYI
Trigger: GATATATTTTGGAGAAGTTCAGCTGAGTGGCTTAGG...CACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCCTAAGCCACTCAGCTaGACTTCTCCAAAATATATC +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLPKPLS*TSPKYI
Trigger: GATATATTTTGGAGAAGTTCAGCTGAGTGGCTTAGG...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR TCA 90 bp ATTCTCCAACTGAATATTCAAATTCAAGCCCCTGATAGGGGACCAGGGAAAGAGGTGGTTTTGGAGTTCTaGTCTTGGGTAGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ILQLNIQIQAPDRGPGKEVVLEF*SWVGRP
Trigger: AGGCCTGCCTACCCAAGATCAGAACTCCAAAACCAC...CTCTTTCCCTGGTCCCCTATCAGGGGCTTGAATTTGAATATTCAGTTGGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR TCA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTAAAGAGAGCAGTAGCTaGAATATGGGGGCATCAATA +
Preference number: 4 (lower is better)
Translates to: RGGSGFGVLILGRQACHIKESSS*NMGASI
Trigger: TATTGATGCCCCCATATTTCAGCTACTGCTCTCTTT...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp CACCCGACTCAAAACAGGCTTGCCCAGACACTTGAGGTCTTTCTGCGCTTCACACCCTTGAATACATTTTaGAGTGTAGCTCGGTATTTC +
Preference number: 4 (lower is better)
Translates to: HPTQNRLAQTLEVFLRFTPLNTF*SVARYF
Trigger: GAAATACCGAGCTACACTTCAAAATGTATTCAAGGG...TGTGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGCCTGTTTTGAGTCGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR TCA 90 bp GGTTTAAAGTCTATCATAACAAAGTCATCATGGGTATTGCCACTGCTGCCCCCGGCTCAGGAAGAACAATaGCTAGCGCACCATCTACTG +
Preference number: 4 (lower is better)
Translates to: GLKSIITKSSWVLPLLPPAQEEQ*LAHHLL
Trigger: CAGTAGATGGTGCGCTAGTCATTGTTCTTCCTGAGC...CGGGGGCAGCAGTGGCAATACCCATGATGACTTTGTTATGATAGACTTTAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR GCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTAAGATGATGAACGAGTaGAAATCTTTTCACCAAGCC +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSKMMNE*KSFHQA
Trigger: GGCTTGGTGAAAAGATTTGCACTCGTTCATCATCTT...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp GGGAGATGTAAGGCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTACAGCTGTCCTGCCAGTaGCTTCTTTGCTTCATGTGT +
Preference number: 4 (lower is better)
Translates to: GRCKALTRNTQLSKVKPLQLSCQ*LLCFMC
Trigger: ACACATGAAGCAAAGAAGGCACTGGCAGGACAGCTG...TAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGCCTTACATCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTAATATGACATATTCATaGCCTTGTTTCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSNMTYS*PCFLES
Trigger: GCTCTCCAGGAAACAAGGGCATGAATATGTCATATT...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR GCA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAATTCAGCCATGGACTGTaGTCCAATATCTATGGAGAG +
Preference number: 4 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKFSHGL*SNIYGE
Trigger: CTCTCCATAGATATTGGAGCACAGTCCATGGCTGAA...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp TGGGGAATCTGGAGGATTCACCTGTTTCATAGCAAGGCAGGATTAGGGCTGATGTTCAGCCATGGACTGTaGTCCAATATCTATGGAGAG +
Preference number: 4 (lower is better)
Translates to: WGIWRIHLFHSKAGLGLMFSHGL*SNIYGE
Trigger: CTCTCCATAGATATTGGAGCACAGTCCATGGCTGAA...CATCAGCCCTAATCCTGCCTTGCTATGAAACAGGTGAATCCTCCAGATTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR CCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACATATTTCCAGCTCCATaGAATCTCCCTCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNIFPAP*NLPQKS
Trigger: AGACTTCTGAGGGAGATTCCATGGAGCTGGAAATAT...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGAATATTTCCAGCTCCATaGAATCTCCCTCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: FCDSTPISWPPAGMSNSGIFPAP*NLPQKS
Trigger: AGACTTCTGAGGGAGATTCCATGGAGCTGGAAATAT...TCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCATATTTCCAGCTCCATaGAATCTCCCTCAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLIFPAP*NLPQKS
Trigger: AGACTTCTGAGGGAGATTCCATGGAGCTGGAAATAT...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CCA 90 bp AGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCTGTTTCATAGCAAGGCACTCGTCAGGGTCACCTaGTTAATGGGTTTGTTGACA +
Preference number: 4 (lower is better)
Translates to: RRFSLWGIWRIHLFHSKALVRVT*LMGLLT
Trigger: TGTCAACAAACCCATTAACCAGGTGACCCTGACGAG...TGCCTTGCTATGAAACAGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR TCA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACCTAAGCCACTCAGCTaGACTTCTCCAAAATATATC +
Preference number: 4 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKPKPLS*TSPKYI
Trigger: GATATATTTTGGAGAAGTTCAGCTGAGTGGCTTAGG...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR TCA 90 bp CTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGCCCTTGAATACATTTTaGAGTGTAGCTCGGTATTTC +
Preference number: 4 (lower is better)
Translates to: LFLRLHTNLLATSWNVKQPLNTF*SVARYF
Trigger: GAAATACCGAGCTACACTTCAAAATGTATTCAAGGG...CTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp TTCAGTCTCTGGGGAATCTGGAGGATTCACCTGTTTCATAGCAAGGCAGGATTATTAGGGCTGATGCTGTaGCCCAGATTCAAGTTACTG +
Preference number: 4 (lower is better)
Translates to: FSLWGIWRIHLFHSKAGLLGLML*PRFKLL
Trigger: CAGTAACTTGAATCTGGGTCACAGCATCAGCCCTAA...TAATCCTGCCTTGCTATGAAACAGGTGAATCCTCCAGATTCCCCAGAGACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR GCA 90 bp CTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGAAGATGATGAACGAGTaGAAATCTTTTCACCAAGCC +
Preference number: 4 (lower is better)
Translates to: LFLRLHTNLLATSWNVKQKMMNE*KSFHQA
Trigger: GGCTTGGTGAAAAGATTTGCACTCGTTCATCATCTT...CTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAAGATGATGAACGAGTaGAAATCTTTTCACCAAGCC +
Preference number: 4 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNKMMNE*KSFHQA
Trigger: GGCTTGGTGAAAAGATTTGCACTCGTTCATCATCTT...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR GCA 90 bp AAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGAAACAAGGATACTTTTACTaGAGGGTTTCCACAAAGGCA +
Preference number: 4 (lower is better)
Translates to: KLSSKSWLRLFTDGALVKQGYFY*RVSTKA
Trigger: TGCCTTTGTGGAAACCCTGCAGTAAAAGTATCCTTG...TTTCACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp AAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGAAACCTAGAGATTCAGGGTaGCATTTTTATTTCCCATGG +
Preference number: 4 (lower is better)
Translates to: KLSSKSWLRLFTDGALVKPRDSG*HFYFPW
Trigger: CCATGGGAAATAAAAATGGCACCCTGAATCTCTAGG...TTTCACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GGACAAGAGGAAGAGAACTTTGCTGTGACTCCAAGTGACAAAATCCTAGAGATTAAATCTCCACACACATaGACCTCCCGACTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GQEEENFAVTPSDKILEIKSPHT*TSRLQA
Trigger: TGCCTGCAGTCGGGAGGTCCATGTGTGTGGAGATTT...AATCTCTAGGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTTCCTCTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp CAGGAAGTAAAGGGGACAATGAAGAGAGCTAAGGGACTCCTTCCTTCTTCCTCCAGGTGGAAAAAGAGGTaGTACACACTTCTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: QEVKGTMKRAKGLLPSSSRWKKR*YTLLES
Trigger: ACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCT...GGAGGAAGAAGGAAGGAGTCCCTTAGCTCTCTTCATTGTCCCCTTTACTTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAATCTTGGGAGCAAACATaGCAAAGGGTATATCCAAAC +
Preference number: 4 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKSWEQT*QRVYPN
Trigger: GTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGA...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CCA 90 bp GGACAAGAGGAAGAGAACTTTGCTGTGACTCCAAGTGACAAAATCCTAGAGATTTCTGCTAACACTTCTTaGTGGCAGCAGCAGCACGCA +
Preference number: 4 (lower is better)
Translates to: GQEEENFAVTPSDKILEISANTS*WQQQHA
Trigger: TGCGTGCTGCTGCTGCCACCAAGAAGTGTTAGCAGA...AATCTCTAGGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTTCCTCTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GGTTTAAAGTCTATCATAACAAAGTCATCATGGGTATTGCCACTGCTGCCCCCGCTTTTCGGACAAAGATaGTCTCCAAGACATCGTGAG +
Preference number: 4 (lower is better)
Translates to: GLKSIITKSSWVLPLLPPLFGQR*SPRHRE
Trigger: CTCACGATGTCTTGGAGACCATCTTTGTCCGAAAAG...CGGGGGCAGCAGTGGCAATACCCATGATGACTTTGTTATGATAGACTTTAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR CCA 90 bp GAGAGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCTGTTTCATAGCAAGTCTTGGGAGCAAACATaGCAAAGGGTATATCCAAAC +
Preference number: 4 (lower is better)
Translates to: ERRFSLWGIWRIHLFHSKSWEQT*QRVYPN
Trigger: GTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGA...CTTGCTATGAAACAGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR CCA 90 bp GCCATGGTTTATAGTCTGTGGGGGATTAGTGACTCTGGCTCAGGAAGAACAATGTCTTGGGAGCAAACATaGCAAAGGGTATATCCAAAC +
Preference number: 4 (lower is better)
Translates to: AMVYSLWGISDSGSGRTMSWEQT*QRVYPN
Trigger: GTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGA...CATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACTATAAACCATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS-3UTR CCA 90 bp GGTTTAAAGTCTATCATAACAAAGTCATCATGGGTATTGCCACTGCTGCCCCCGATGGTTTATAGTCTGTaGGGGATTAGTGACTCTGGC +
Preference number: 4 (lower is better)
Translates to: GLKSIITKSSWVLPLLPPMVYSL*GISDSG
Trigger: GCCAGAGTCACTAATCCCCCACAGACTATAAACCAT...CGGGGGCAGCAGTGGCAATACCCATGATGACTTTGTTATGATAGACTTTAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR TCA 90 bp GCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAGTCAGTTCCAGTAAGAGAACTTTGCTGTaGCTCCAAGTGACAAAATCC +
Preference number: 4 (lower is better)
Translates to: ALTRNTQLSKVKPLVSSSKRTLL*LQVTKS
Trigger: GGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTT...ACTGGAACTGACTAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAGTCAGTTCCAGTTCTTGGGAGCAAACATaGCAAAGGGTATATCCAAAC +
Preference number: 4 (lower is better)
Translates to: ALTRNTQLSKVKPLVSSSSWEQT*QRVYPN
Trigger: GTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGA...ACTGGAACTGACTAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CCA 90 bp GGACAAGAGGAAGAGAACTTTGCTGTGACTCCAAGTGACAAAATCCTAGAGATTAGTCTCTGGGGAATCTaGAGGATTCACCATTGGATC +
Preference number: 4 (lower is better)
Translates to: GQEEENFAVTPSDKILEISLWGI*RIHHWI
Trigger: GATCCAATGGTGAATCCTCCAGATTCCCCAGAGACT...AATCTCTAGGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTTCCTCTTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GGGAGATGTAAGGCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAGTGAGGCTAGGCACTTaGCTTATTCAAGTAACAATA +
Preference number: 4 (lower is better)
Translates to: GRCKALTRNTQLSKVKPLVRLGT*LIQVTI
Trigger: TATTGTTACTTGAATAAGTCAAGTGCCTAGCCTCAC...TAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGCCTTACATCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR GCA 90 bp GCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAGTCAGTTCCAGTAATATGACATATTCATaGCCTTGTTTCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ALTRNTQLSKVKPLVSSSNMTYS*PCFLES
Trigger: GCTCTCCAGGAAACAAGGGCATGAATATGTCATATT...ACTGGAACTGACTAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR TCA 90 bp GGGAGATGTAAGGCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAAATGCATTCTCCAACTaGATATTCAAATTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: GRCKALTRNTQLSKVKPLNAFSN*IFKFKP
Trigger: GGGCTTGAATTTGAATATTCAGTTGGAGAATGCATT...TAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGCCTTACATCTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR CAA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCACTGGGAGGTGACTTaGCCCCCGGCCAGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHHWEVT*PPASPL
Trigger: AAGAGGGCTGGCCGGGGGCAAAGTCACCTCCCAGTG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAACTGGGCACTGGGCTaGACTGCCGCCACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKNWALG*TAATES
Trigger: AGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTT...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS CCA 90 bp CAGCCTGGGCAACAGAGCAAGACTGCGAAGCTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACGGAGGCCGGGACCTGGGACCGACCA +
Preference number: 5 (lower is better)
Translates to: QPGQQSKTAKLRHKE*FRALITEAGTWDRP
Trigger: TGGTCGGTCCCAGGTCCCGGCCTCCGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAGCTTCGCAGTCTTGCTCTGTTGCCCAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583249.5
CDS-3UTR CAA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGCTAAGACTCCGCGAGTaGTCGCACCCACGTCGACTG +
Preference number: 5 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKLRLRE*SHPRRL
Trigger: CAGTCGACGTGGGTGCGACAACTCGCGGAGTCTTAG...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCAGGCCCCAGACGTTTaGCTCCTAAGACTCCGCGAG +
Preference number: 5 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHQAPDV*LLRLRE
Trigger: CTCGCGGAGTCTTAGGAGCAAAACGTCTGGGGCCTG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGCAGAAGGGGTGCAGGTaGCCAGTCTCTCCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKQKGCR*PVSPGQ
Trigger: CTGACCAGGAGAGACTGGCAACCTGCACCCCTTCTG...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACCAGAAGGGGTGCAGGTaGCCAGTCTCTCCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHQKGCR*PVSPGQ
Trigger: CTGACCAGGAGAGACTGGCAACCTGCACCCCTTCTG...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAACTGGGCACTGGGCTaGACTGCCGCCACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: FSNWALGLTAATESPGGPNWALG*TAATES
Trigger: AGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTT...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CAA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGAACTGGGCACTGGGCTaGACTGCCGCCACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWNWALG*TAATES
Trigger: AGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTT...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS CCA 90 bp GTTGTCGCACCCACGTCGACTGGCGCTCTTCAGTGCTTCCCTCACTaGTTAAGCGGTCACTCCCGCCTTAAGCCCAGCAGCCGGTCGCTT +
Preference number: 5 (lower is better)
Translates to: VVAPTSTGALQCFPH*LSGHSRLKPSSRSL
Trigger: AAGCGACCGGCTGCTGGGCTTAAGGCGGGAGTGACCGCTTAACCAGTGAGGGAAGCACTGAAGAGCGCCAGTCGACGTGGGTGCGACAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000526715.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000530942.1
ENST00000533325.5
ENST00000534610.5
ENST00000577256.5
ENST00000578626.5
ENST00000579280.1
ENST00000580238.5
ENST00000581416.5
ENST00000581438.5
ENST00000582547.5
ENST00000583249.5
ENST00000683050.1
CDS CCA 90 bp GCCTGGGTGACAAAGCAAAACCCTGCGAAGCTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACGGAGGCCGGGACCTGGGACCGACCA +
Preference number: 5 (lower is better)
Translates to: AWVTKQNPAKLRHKE*FRALITEAGTWDRP
Trigger: TGGTCGGTCCCAGGTCCCGGCCTCCGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAGCTTCGCAGGGTTTTGCTTTGTCACCCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530942.1
CDS CCA 90 bp GATCACACCACTACACTCCAGCCTGCGAAGCTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACGGAGGCCGGGACCTGGGACCGACCA +
Preference number: 5 (lower is better)
Translates to: DHTTTLQPAKLRHKE*FRALITEAGTWDRP
Trigger: TGGTCGGTCCCAGGTCCCGGCCTCCGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAGCTTCGCAGGCTGGAGTGTAGTGGTGTGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579280.1
CDS-3UTR CAA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGCTAAGACTCCGCGAGTaGTCGCACCCACGTCGACTG +
Preference number: 5 (lower is better)
Translates to: ATESPGGPRVGTSGSPWELRLRE*SHPRRL
Trigger: CAGTCGACGTGGGTGCGACAACTCGCGGAGTCTTAG...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGCTAAGACTCCGCGAGTaGTCGCACCCACGTCGACTG +
Preference number: 5 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWLRLRE*SHPRRL
Trigger: CAGTCGACGTGGGTGCGACAACTCGCGGAGTCTTAG...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGCAGGCCCCAGACGTTTaGCTCCTAAGACTCCGCGAG +
Preference number: 5 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWQAPDV*LLRLRE
Trigger: CTCGCGGAGTCTTAGGAGCAAAACGTCTGGGGCCTG...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCCAGAAGGGGTGCAGGTaGCCAGTCTCTCCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSQKGCR*PVSPGQ
Trigger: CTGACCAGGAGAGACTGGCAACCTGCACCCCTTCTG...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTCAGGAGGGCCAGTaGGCTGCTACTGCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKSQEGQ*AATASA
Trigger: AGCAGAAGCAGTAGCAGCCAACTGGCCCTCCTGACT...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS GCA 90 bp AAGACTCCGCGAGTTGTCGCACCCACGTCGACTGGCGCTCTTCAGTaGTTCCCTCACTGGTTAAGCGGTCACTCCCGCCTTAAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: KTPRVVAPTSTGALQ*FPHWLSGHSRLKPS
Trigger: GCTGGGCTTAAGGCGGGAGTGACCGCTTAACCAGTGAGGGAAGCACTGAAGAGCGCCAGTCGACGTGGGTGCGACAACTCGCGGAGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000526715.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000530942.1
ENST00000533325.5
ENST00000534610.5
ENST00000577256.5
ENST00000578626.5
ENST00000579280.1
ENST00000580238.5
ENST00000581416.5
ENST00000581438.5
ENST00000582547.5
ENST00000583249.5
ENST00000683050.1
CDS GCA 90 bp GGAGGGTGTGGCAGCACAGTGGGTTCTGTCAGAAGGGGTGCAGGTTaGCAGTCTCTCCTGGTCAGCCTGGGTACCATGGACAGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: GGCGSTVGSVRRGAG*QSLLVSLGTMDRLV
Trigger: AACCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAGACTGGCAACCTGCACCCCTTCTGACAGAACCCACTGTGCTGCCACACCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS GCA 90 bp GACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCCGGGGGTGCTaGAGGAGTCAGTCTAGGGCTCATTCCTTTCATGGCAGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: DTWRQTAGPSLSRGC*RSQSRAHSFHGRSP
Trigger: CGGAGACCTGCCATGAAAGGAATGAGCCCTAGACTGACTCCTGCAGCACCCCCGGGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526485.1
CDS CCA 90 bp CAGGTTGCCAGTCTCTCCTGGTCAGCCTGGGTACCATGGACAGGCTaGTTGGGAGCAAGGGGTACCCCACCTTCCTTCCCAGGAACCATC +
Preference number: 5 (lower is better)
Translates to: QVASLSWSAWVPWTG*LGARGTPPSFPGTI
Trigger: GATGGTTCCTGGGAAGGAAGGTGGGGTACCCCTTGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAGACTGGCAACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS CCA 90 bp GCACAGTGGGTTCTGTCAGAAGGGGTGCAGGTTGCCAGTCTCTCCTaGTCAGCCTGGGTACCATGGACAGGCTGGTTGGGAGCAAGGGGT +
Preference number: 5 (lower is better)
Translates to: AQWVLSEGVQVASLS*SAWVPWTGWLGARG
Trigger: ACCCCTTGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAGACTGGCAACCTGCACCCCTTCTGACAGAACCCACTGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS CCA 90 bp CCTGGACAATCACTTGGACAGTCTGCGAAGCTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACGGAGGCCGGGACCTGGGACCGACCA +
Preference number: 5 (lower is better)
Translates to: PGQSLGQSAKLRHKE*FRALITEAGTWDRP
Trigger: TGGTCGGTCCCAGGTCCCGGCCTCCGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAGCTTCGCAGACTGTCCAAGTGATTGTCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530500.5
CDS-3UTR CAA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGCACTGGGAGGTGACTTaGCCCCCGGCCAGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRHWEVT*PPASPL
Trigger: AAGAGGGCTGGCCGGGGGCAAAGTCACCTCCCAGTG...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGAGTCAGGAGGGCCAGTaGGCTGCTACTGCTTCTGCT +
Preference number: 5 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWSQEGQ*AATASA
Trigger: AGCAGAAGCAGTAGCAGCCAACTGGCCCTCCTGACT...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGCTCAAAGCTGGGGCCTaGGGGATAAACCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWLKAGA*GINLSL
Trigger: CAGGCTCAGGTTTATCCCCAAGGCCCCAGCTTTGAG...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS GCA 90 bp CACTACTGGAGGGTGTGGCAGCACAGTGGGTTCTGTCAGAAGGGGTaGAGGTTGCCAGTCTCTCCTGGTCAGCCTGGGTACCATGGACAG +
Preference number: 5 (lower is better)
Translates to: HYWRVWQHSGFCQKG*RLPVSPGQPGYHGQ
Trigger: CTGTCCATGGTACCCAGGCTGACCAGGAGAGACTGGCAACCTGCACCCCTTCTGACAGAACCCACTGTGCTGCCACACCCTCCAGTAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS CCA 90 bp TTGCCAGTCTCTCCTGGTCAGCCTGGGTACCATGGACAGGCTGGTTaGGAGCAAGGGGTACCCCACCTTCCTTCCCAGGAACCATCAGCT +
Preference number: 5 (lower is better)
Translates to: LPVSPGQPGYHGQAG*EQGVPHLPSQEPSA
Trigger: AGCTGATGGTTCCTGGGAAGGAAGGTGGGGTACCCCTTGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAGACTGGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS-3UTR CAA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGCTCCACACCAATCTCTaGGCCACCAGCTGGAATGTC +
Preference number: 5 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWLHTNL*ATSWNV
Trigger: GACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAG...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CAA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCCGGCCAGCCCTCTTCTaGGATCTCGCTGTCTGTATG +
Preference number: 5 (lower is better)
Translates to: ATSWNVKQWMVTAGREGARPALF*DLAVCM
Trigger: CATACAGACAGCGAGATCCAAGAAGAGGGCTGGCCG...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp ACTGTCTCCTTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGCACTGGGAGGTGACTTaGCCCCCGGCCAGCCCTCTT +
Preference number: 5 (lower is better)
Translates to: TVSFLFLRLHTNLLATSWHWEVT*PPASPL
Trigger: AAGAGGGCTGGCCGGGGGCAAAGTCACCTCCCAGTG...CCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAAGGAGACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGCAAGTACCCAGGCAGTaGGGGGACACACACAACATC +
Preference number: 5 (lower is better)
Translates to: ATESPGGPRVGTSGSPWEQVPRQ*GDTHNI
Trigger: GATGTTGTGTGTGTCCCCCAACTGCCTGGGTACTTG...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp GGCCTTGGGGATAAACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCTCAAAGCTGGGGCCTaGGGGATAAACCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: GLGDKPEPGFSKPRMCSGLKAGA*GINLSL
Trigger: CAGGCTCAGGTTTATCCCCAAGGCCCCAGCTTTGAG...CCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTTTATCCCCAAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS CCA 90 bp TTGCCACTGCTGCCCCCGCTGGAGCCATCTGAGTGCAGGCTGCCCTaGAGAGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCATT +
Preference number: 5 (lower is better)
Translates to: LPLLPPLEPSECRLP*RGDSVSGESGGFTI
Trigger: AATGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCTCTCCAGGGCAGCCTGCACTCAGATGGCTCCAGCGGGGGCAGCAGTGGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS CCA 90 bp TTGCCAGTCTCTCCTGGTCAGCCTGGGTACCATGGACAGGCTGGTTaGGAGCAAGGGGTACCCCACCTTCCTTCCCAGGAACCATCAGTT +
Preference number: 5 (lower is better)
Translates to: LPVSPGQPGYHGQAG*EQGVPHLPSQEPSV
Trigger: AACTGATGGTTCCTGGGAAGGAAGGTGGGGTACCCCTTGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAGACTGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525009.5
CDS-3UTR CAA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACTGGGGTCCTCTCAAATaGCCTGGTAGACATGAATGC +
Preference number: 5 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHWGPLK*PGRHEC
Trigger: GCATTCATGTCTACCAGGCAATTTGAGAGGACCCCA...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACCAGAAGGGGTGCAGGTaGCCAGTCTCTCCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: RRFFPSPRPARESSPTGHQKGCR*PVSPGQ
Trigger: CTGACCAGGAGAGACTGGCAACCTGCACCCCTTCTG...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCCTGGAGGATTCACCATaGGATCGGTATCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSLEDSP*DRYPPA
Trigger: AGCTGGAGGATACCGATCCAATGGTGAATCCTCCAG...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGCTGGAGGATTCACCATaGGATCGGTATCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWLEDSP*DRYPPA
Trigger: AGCTGGAGGATACCGATCCAATGGTGAATCCTCCAG...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCCTCCACACCAATCTCTaGGCCACCAGCTGGAATGTC +
Preference number: 5 (lower is better)
Translates to: ATSWNVKQWMVTAGREGALHTNL*ATSWNV
Trigger: GACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAG...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CAA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCTCCACACCAATCTCTaGGCCACCAGCTGGAATGTC +
Preference number: 5 (lower is better)
Translates to: LTAATESPGGPRVGTSGSLHTNL*ATSWNV
Trigger: GACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAG...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CAA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGCCTCAGAAGTCAGCCTaGTATGTGGGAACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKPQKSA*YVGTVS
Trigger: TGACACTGTTCCCACATACAAGGCTGACTTCTGAGG...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGGAAAGGCGAGAGCTaGAGAGTTGATGGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKRKGES*RVDGKR
Trigger: CCTTTTCCCATCAACTCTCAAGCTCTCGCCTTTCCT...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528494.5
CDS-3UTR CAA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCAGCCTGGACAATCACTaGGACAGTCTGCGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: LTAATESPGGPRVGTSGSSLDNH*DSLRSC
Trigger: GCAGCTTCGCAGACTGTCCAAGTGATTGTCCAGGCT...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530500.5
CDS-3UTR CAA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCCTAAGACTCCGCGAGTaGTCGCACCCACGTCGACTG +
Preference number: 5 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGLRLRE*SHPRRL
Trigger: CAGTCGACGTGGGTGCGACAACTCGCGGAGTCTTAG...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCCAGGCCCCAGACGTTTaGCTCCTAAGACTCCGCGAG +
Preference number: 5 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGQAPDV*LLRLRE
Trigger: CTCGCGGAGTCTTAGGAGCAAAACGTCTGGGGCCTG...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGAGCCTGGACAATCACTaGGACAGTCTTGAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: ATESPGGPRVGTSGSPWESLDNH*DSLEGK
Trigger: TTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGCT...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
CDS-3UTR CAA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGCCTGGACAATCACTaGGACAGTCTTGAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSSLDNH*DSLEGK
Trigger: TTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGCT...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
CDS-3UTR CAA 90 bp CTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGACCAATCTGAACCCGTaGGAGAAGATGATGAACGAG +
Preference number: 5 (lower is better)
Translates to: LQLGTGLDCRHGVSRRSKTNLNP*EKMMNE
Trigger: CTCGTTCATCATCTTCTCCAACGGGTTCAGATTGGT...CTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCACCAATCTGAACCCGTaGGAGAAGATGATGAACGAG +
Preference number: 5 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPTNLNP*EKMMNE
Trigger: CTCGTTCATCATCTTCTCCAACGGGTTCAGATTGGT...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGACTGGGGTCCTCTCAAATaGCCTGGTAGACATGAATGC +
Preference number: 5 (lower is better)
Translates to: APQDSPRDQEQVPRQLGDWGPLK*PGRHEC
Trigger: GCATTCATGTCTACCAGGCAATTTGAGAGGACCCCA...GTCCCCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGTGGGGTCCTCTCAAATaGCCTGGTAGACATGAATGC +
Preference number: 5 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWWGPLK*PGRHEC
Trigger: GCATTCATGTCTACCAGGCAATTTGAGAGGACCCCA...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGGTGGTACACACTTCTaGAGAGTCTTCTACAGACGG +
Preference number: 5 (lower is better)
Translates to: GLDCRHGVSRRSKSRDFWGGTHF*RVFYRR
Trigger: CCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCACC...CCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CAA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCGGTGGTACACACTTCTaGAGAGTCTTCTACAGACGG +
Preference number: 5 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSGGTHF*RVFYRR
Trigger: CCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCACC...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CAA 90 bp GATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGGGCCACACCTGGTTAATGGGTTaGTTGACAAAAGCCCCCACT +
Preference number: 5 (lower is better)
Translates to: DEGWEQLMHGRLLMPWGHTWLMG*LTKAPT
Trigger: AGTGGGGGCTTTTGTCAACAAACCCATTAACCAGGT...GTGGCCCCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp TCCCAAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTAACTGGGCACTGGGCTaGACTGCCGCCACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: SQAQLKVMAETLHRWSPGNWALG*TAATES
Trigger: AGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTT...ACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp CACTGGGAGGTGACTTTGCCCCCGGCCAGCCCTCTTCTTGGATCTCGCTGTCTGTTTGGAGTTCTGATCTaGGGTAGGCAGGCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: HWEVTLPPASPLLGSRCLFGVLI*GRQACH
Trigger: ATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAA...CAGACAGCGAGATCCAAGAAGAGGGCTGGCCGGGGGCAAAGTCACCTCCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCTTTGGAGTTCTGATCTaGGGTAGGCAGGCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSFGVLI*GRQACH
Trigger: ATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAA...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp AACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGCAAGTACCCAGGCAGTaGGGGGACACACACAACATC +
Preference number: 5 (lower is better)
Translates to: NLSLGSASHACALGQSQEQVPRQ*GDTHNI
Trigger: GATGTTGTGTGTGTCCCCCAACTGCCTGGGTACTTG...CTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp TCCCAAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTCTAAGACTCCGCGAGTaGTCGCACCCACGTCGACTG +
Preference number: 5 (lower is better)
Translates to: SQAQLKVMAETLHRWSPGLRLRE*SHPRRL
Trigger: CAGTCGACGTGGGTGCGACAACTCGCGGAGTCTTAG...ACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp GCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGACACCAATCTGAACCCGTaGGAGAAGATGATGAACGAG +
Preference number: 5 (lower is better)
Translates to: APQDSPRDQEQVPRQLGDTNLNP*EKMMNE
Trigger: CTCGTTCATCATCTTCTCCAACGGGTTCAGATTGGT...GTCCCCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGACCAATCTGAACCCGTaGGAGAAGATGATGAACGAG +
Preference number: 5 (lower is better)
Translates to: ATESPGGPRVGTSGSPWETNLNP*EKMMNE
Trigger: CTCGTTCATCATCTTCTCCAACGGGTTCAGATTGGT...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCTGGGGTCCTCTCAAATaGCCTGGTAGACATGAATGC +
Preference number: 5 (lower is better)
Translates to: LTAATESPGGPRVGTSGSWGPLK*PGRHEC
Trigger: GCATTCATGTCTACCAGGCAATTTGAGAGGACCCCA...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTAGGAAAGGCGAGAGCTaGAGAGCTGGGATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSRKGES*RAGMVG
Trigger: CCCCACCATCCCAGCTCTCAAGCTCTCGCCTTTCCT...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359513.8
ENST00000526508.5
CDS-3UTR CAA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCATCCAGCTCCAAATTCTaGGGAGCAAACATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: FSNWALGLTAATESPGGPSSSKF*GANMAK
Trigger: CTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGA...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCATGGGAGTCCAGCTCCAAATTCTaGGGAGCAAACATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: ATESPGGPRVGTSGSPWESSSKF*GANMAK
Trigger: CTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGA...CTCCCATGGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp TTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGAAACTGGGCACTGGGCTaGACTGCCGCCACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: FCDSTPISWPPAGMSNSGNWALG*TAATES
Trigger: AGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTT...TCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CAA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTAACTGGGCACTGGGCTaGACTGCCGCCACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: RGGSGFGVLILGRQACHINWALG*TAATES
Trigger: AGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTT...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCAACTGGGCACTGGGCTaGACTGCCGCCACGGAGTCT +
Preference number: 5 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLNWALG*TAATES
Trigger: AGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTT...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CAA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCTTTGGAGTTCTGATCTaGGGTAGGCAGGCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: ATSWNVKQWMVTAGREGAFGVLI*GRQACH
Trigger: ATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAA...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp GCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGGGCCTCCAAACAAAGTAGGTaGGAGAGGTTGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ATSWNVKQWMVTAGREGASKQSR*ERLEEE
Trigger: CTCCTCCTCCAACCTCTCCAACCTACTTTGTTTGGA...GGCCCCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCTCCAAACAAAGTAGGTaGGAGAGGTTGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSSKQSR*ERLEEE
Trigger: CTCCTCCTCCAACCTCTCCAACCTACTTTGTTTGGA...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp AATCTGGAGGATTCACCCGTAAGCCGAGGGGCCATGGTTTATAGTCTGTGGGGGACGGTGGGCTCACCATaGGATCGGTATCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: NLEDSPVSRGAMVYSLWGTVGSP*DRYPPA
Trigger: AGCTGGAGGATACCGATCCAATGGTGAGCCCACCGT...CCCCCACAGACTATAAACCATGGCCCCTCGGCTTACGGGTGAATCCTCCAGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532067.1
CDS CCA 90 bp GATACGGTTTCAGTATCCTCACTACTGGAGGGTGTGGCAGCACAGTaGGTTCTGTCAGAAGGGGTGCAGGTTGCCAGTCTCTCCTGGTCA +
Preference number: 5 (lower is better)
Translates to: DTVSVSSLLEGVAAQ*VLSEGVQVASLSWS
Trigger: TGACCAGGAGAGACTGGCAACCTGCACCCCTTCTGACAGAACCCACTGTGCTGCCACACCCTCCAGTAGTGAGGATACTGAAACCGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS-3UTR CAA 90 bp TTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGACAGGCCCCAGACGTTTaGCTCCTAAGACTCCGCGAG +
Preference number: 5 (lower is better)
Translates to: FCDSTPISWPPAGMSNSGQAPDV*LLRLRE
Trigger: CTCGCGGAGTCTTAGGAGCAAAACGTCTGGGGCCTG...TCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp CACGTGAGTCTTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCTTTCTGTCCTGGGAATaGAGATCAGTTTCCATTGCC +
Preference number: 5 (lower is better)
Translates to: HVSLLQLGTGLDCRHGVSFLSWE*RSVSIA
Trigger: GGCAATGGAAACTGATCTCAATTCCCAGGACAGAAA...GGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAAGACTCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
CDS-3UTR CAA 90 bp GACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCCCACCTCTGGGATGTCTTaGATTGCTAAGTTGAACCAA +
Preference number: 5 (lower is better)
Translates to: DCRHGVSRRSKSRDFWVPTSGMS*IAKLNQ
Trigger: TTGGTTCAACTTAGCAATCAAAGACATCCCAGAGGT...GGGGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp TTCTCCAACTGGGCACTGGGCTTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAGACATATTCATGCCCTaGTTTCCTGGAGAGCCTATA +
Preference number: 5 (lower is better)
Translates to: FSNWALGLTAATESPGGPDIFMP*FPGEPI
Trigger: TATAGGCTCTCCAGGAAACAAGGGCATGAATATGTC...TGGACCTCCTGGAGACTCCGTGGCGGCAGTCAAGCCCAGTGCCCAGTTGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTGCCAGAAGGAAAGGCGAGAGCTaGAGAGCTGGGATGGTGGGG +
Preference number: 5 (lower is better)
Translates to: GSGFGVLILGRQACHIARRKGES*RAGMVG
Trigger: CCCCACCATCCCAGCTCTCAAGCTCTCGCCTTTCCT...TCTGGCAATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359513.8
ENST00000526508.5
CDS-3UTR CAA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCACCTGGTTAATGGGTTaGTTGACAAAAGCCCCCACT +
Preference number: 5 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPTWLMG*LTKAPT
Trigger: AGTGGGGGCTTTTGTCAACAAACCCATTAACCAGGT...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp AGGAGGAGGAGGGACTCTGACACCTGGAGACAAACAGCTGGTCCCAGCCTGTCCACCTGGTTAATGGGTTaGTTGACAAAAGCCCCCACT +
Preference number: 5 (lower is better)
Translates to: RRRRDSDTWRQTAGPSLSTWLMG*LTKAPT
Trigger: AGTGGGGGCTTTTGTCAACAAACCCATTAACCAGGT...GGACAGGCTGGGACCAGCTGTTTGTCTCCAGGTGTCAGAGTCCCTCCTCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp TTGACTGCCGCCACGGAGTCTCCAGGAGGTCCAAGAGTAGGGACTTCTGGGTCCACCTGGTTAATGGGTTaGTTGACAAAAGCCCCCACT +
Preference number: 5 (lower is better)
Translates to: LTAATESPGGPRVGTSGSTWLMG*LTKAPT
Trigger: AGTGGGGGCTTTTGTCAACAAACCCATTAACCAGGT...GGACCCAGAAGTCCCTACTCTTGGACCTCCTGGAGACTCCGTGGCGGCAGTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GGCCTTGGGGATAAACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGTCCAGCTCCAAATTCTaGGGAGCAAACATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: GLGDKPEPGFSKPRMCSGSSSKF*GANMAK
Trigger: CTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGA...CCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTTTATCCCCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACCTGGAGGATTCACCATaGGATCGGTATCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHLEDSP*DRYPPA
Trigger: AGCTGGAGGATACCGATCCAATGGTGAATCCTCCAG...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp CACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCTCAAAGCTGGGGCCTaGGGGATAAACCTGAGCCTG +
Preference number: 5 (lower is better)
Translates to: HQSLGHQLECQTVDGDSRLKAGA*GINLSL
Trigger: CAGGCTCAGGTTTATCCCCAAGGCCCCAGCTTTGAG...CCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS GCA 90 bp CTCCACACACATGGACCTCCCGACTGCAGGCAGCTGTCCTGCCAGTaGCTTCTTTGCTTCATGTGTAACCTCTGGGATGTCTTTGATTGC +
Preference number: 5 (lower is better)
Translates to: LHTHGPPDCRQLSCQ*LLCFMCNLWDVFDC
Trigger: GCAATCAAAGACATCCCAGAGGTTACACATGAAGCAAAGAAGGCACTGGCAGGACAGCTGCCTGCAGTCGGGAGGTCCATGTGTGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000359513.8
ENST00000395549.3
ENST00000524625.5
ENST00000526508.5
ENST00000528145.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533325.5
ENST00000534610.5
ENST00000683050.1
CDS GCA 90 bp CAAAGATGGTCTCCAAGACATCGTGAGGGGAGGCCCGTCCCTCACTaGTGTTTGATACGGTTTCAGTATCCTCACTACTGGAGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: QRWSPRHREGRPVPH*CLIRFQYPHYWRVW
Trigger: CCACACCCTCCAGTAGTGAGGATACTGAAACCGTATCAAACAGCAGTGAGGGACGGGCCTCCCCTCACGATGTCTTGGAGACCATCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS CCA 90 bp GCGCACCATCTACTGGGAACTCGTAGTCAACGGTGGGCTCACCATTaGATCGGTATCCTCCAGCTCCAAATTCTTGGGAGCAAACATGGC +
Preference number: 5 (lower is better)
Translates to: AHHLLGTRSQRWAHH*IGILQLQILGSKHG
Trigger: GCCATGTTTGCTCCCAAGAATTTGGAGCTGGAGGATACCGATCCAATGGTGAGCCCACCGTTGACTACGAGTTCCCAGTAGATGGTGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS-3UTR CAA 90 bp AAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTGAAACAGGCCCCAGACGTTTaGCTCCTAAGACTCCGCGAG +
Preference number: 5 (lower is better)
Translates to: KLSSKSWLRLFTDGALVKQAPDV*LLRLRE
Trigger: CTCGCGGAGTCTTAGGAGCAAAACGTCTGGGGCCTG...TTTCACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp TCAGAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTTTCTGTCCTGGGAATaGAGATCAGTTTCCATTGCC +
Preference number: 5 (lower is better)
Translates to: SEQDEGWEQLMHGRLLMPFLSWE*RSVSIA
Trigger: GGCAATGGAAACTGATCTCAATTCCCAGGACAGAAA...GGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
CDS-3UTR CAA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGAGCCTGGACAATCACTaGGACAGTCTTGAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRSLDNH*DSLEGK
Trigger: TTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGCT...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp CGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCACAGCCTGGACAATCACTaGGACAGTCTTGAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: RRFFPSPRPARESSPTGHSLDNH*DSLEGK
Trigger: TTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGCT...GTGCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
CDS-3UTR CAA 90 bp CAGGAAGTAAAGGGGACAATGAAGAGAGCTAAGGGACTCCTTCCTTCTTCCTCCCAGAAGGGGTGCAGGTaGCCAGTCTCTCCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: QEVKGTMKRAKGLLPSSSQKGCR*PVSPGQ
Trigger: CTGACCAGGAGAGACTGGCAACCTGCACCCCTTCTG...GGAGGAAGAAGGAAGGAGTCCCTTAGCTCTCTTCATTGTCCCCTTTACTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGAAGGGGTGCAGGTaGCCAGTCTCTCCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKQKGCR*PVSPGQ
Trigger: CTGACCAGGAGAGACTGGCAACCTGCACCCCTTCTG...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCGGCCAGCCCTCTTCTaGGATCTCGCTGTCTGTATG +
Preference number: 5 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLRPALF*DLAVCM
Trigger: CATACAGACAGCGAGATCCAAGAAGAGGGCTGGCCG...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp TTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGACGGCCAGCCCTCTTCTaGGATCTCGCTGTCTGTATG +
Preference number: 5 (lower is better)
Translates to: FCDSTPISWPPAGMSNSGRPALF*DLAVCM
Trigger: CATACAGACAGCGAGATCCAAGAAGAGGGCTGGCCG...TCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp GCTCCACAGGACAGCCCCAGGGATCAGGAACAAGTACCCAGGCAGTTGGGGGACGGTGAGGCTAGGCACTaGACTTATTCAAGTAACAAT +
Preference number: 5 (lower is better)
Translates to: APQDSPRDQEQVPRQLGDGEARH*TYSSNN
Trigger: ATTGTTACTTGAATAAGTCAAGTGCCTAGCCTCACC...GTCCCCCAACTGCCTGGGTACTTGTTCCTGATCCCTGGGGCTGTCCTGTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp GCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACCCTCAGAAGTCAGCCTaGTATGTGGGAACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: ALLRAFSYEGSSHLQGQHPQKSA*YVGTVS
Trigger: TGACACTGTTCCCACATACAAGGCTGACTTCTGAGG...GTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp AACCTGAGCCTGGGTTCAGCAAGCCACGCATGTGCTCTGGGCCAAAGTCAGGAGTGTAGATGCCAAAGATaGCTGCCTCAGACAATGGCT +
Preference number: 5 (lower is better)
Translates to: NLSLGSASHACALGQSQECRCQR*LPQTMA
Trigger: AGCCATTGTCTGAGGCAGCAATCTTTGGCATCTACA...CTCCTGACTTTGGCCCAGAGCACATGCGTGGCTTGCTGAACCCAGGCTCAGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp CTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGCAGGGAAGGACCAATCTGAACCCGTaGGAGAAGATGATGAACGAG +
Preference number: 5 (lower is better)
Translates to: LGHQLECQTVDGDSRQGRTNLNP*EKMMNE
Trigger: CTCGTTCATCATCTTCTCCAACGGGTTCAGATTGGT...CCTTCCCTGCCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGGGTGGTACACACTTCTaGAGAGTCTTCTACAGACGG +
Preference number: 5 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREGGTHF*RVFYRR
Trigger: CCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCACC...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
CDS-3UTR CAA 90 bp CTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGCTCCACACCAATCTCTaGGCCACCAGCTGGAATGTC +
Preference number: 5 (lower is better)
Translates to: LSATPHQSLGHQLECQTVLHTNL*ATSWNV
Trigger: GACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAG...CACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CAA 90 bp ACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACCTCCACACCAATCTCTaGGCCACCAGCTGGAATGTC +
Preference number: 5 (lower is better)
Translates to: TPHQSLGHQLECQTVDGDLHTNL*ATSWNV
Trigger: GACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAG...GTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CAA 90 bp CACCCAGGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTTTTGGAGTTCTGATCTaGGGTAGGCAGGCCTGTCAT +
Preference number: 5 (lower is better)
Translates to: HPGLPGLPEWSQSLCRNCFGVLI*GRQACH
Trigger: ATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAA...ACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGCCTCAGAAGTCAGCCTaGTATGTGGGAACAGTGTCA +
Preference number: 5 (lower is better)
Translates to: AEGFFVRRFFPSPRPAREPQKSA*YVGTVS
Trigger: TGACACTGTTCCCACATACAAGGCTGACTTCTGAGG...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp CACCCAGGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTTCCAAACAAAGTAGGTaGGAGAGGTTGGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: HPGLPGLPEWSQSLCRNCSKQSR*ERLEEE
Trigger: CTCCTCCTCCAACCTCTCCAACCTACTTTGTTTGGA...ACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTGGCTTGCCCAGACACTaGAGGTCTTTCTGCGCTTCA +
Preference number: 5 (lower is better)
Translates to: RGGSGFGVLILGRQACHIGLPRH*RSFCAS
Trigger: TGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGCC...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR CAA 90 bp TGGGGAATCTGGAGGATTCACCTGTTTCATAGCAAGGCAGGATTAGGGCTGATGACGGTGGGCTCACCATaGGATCGGTATCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: WGIWRIHLFHSKAGLGLMTVGSP*DRYPPA
Trigger: AGCTGGAGGATACCGATCCAATGGTGAGCCCACCGT...CATCAGCCCTAATCCTGCCTTGCTATGAAACAGGTGAATCCTCCAGATTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR CAA 90 bp GCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGACCAATCTGAACCCGTaGGAGAAGATGATGAACGAG +
Preference number: 5 (lower is better)
Translates to: AEGFFVRRFFPSPRPARETNLNP*EKMMNE
Trigger: CTCGTTCATCATCTTCTCCAACGGGTTCAGATTGGT...CTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp CACCCGACTCAAAACAGGCTTGCCCAGACACTTGAGGTCTTTCTGCGCTTCACAGGTGGTACACACTTCTaGAGAGTCTTCTACAGACGG +
Preference number: 5 (lower is better)
Translates to: HPTQNRLAQTLEVFLRFTGGTHF*RVFYRR
Trigger: CCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCACC...TGTGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGCCTGTTTTGAGTCGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR CAA 90 bp GATGGCCCTGCTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCATCCAGCTCCAAATTCTaGGGAGCAAACATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: DGPAEGFFVRRFFPSPRPSSSKF*GANMAK
Trigger: CTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGA...TGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAGCAGGGCCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp CCTGGAGAGGAGATTCAGTCTCTGGGGAATCTGGAGGATTCACCCGTAAGCCGATCCAGCTCCAAATTCTaGGGAGCAAACATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: PGEEIQSLGNLEDSPVSRSSSKF*GANMAK
Trigger: CTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGA...TCGGCTTACGGGTGAATCCTCCAGATTCCCCAGAGACTGAATCTCCTCTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532067.1
CDS-3UTR CAA 90 bp TTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGACTGGAGGATTCACCATaGGATCGGTATCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: FCDSTPISWPPAGMSNSGLEDSP*DRYPPA
Trigger: AGCTGGAGGATACCGATCCAATGGTGAATCCTCCAG...TCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp TCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACCTGGAGGATTCACCATaGGATCGGTATCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: SSFCDSTPISWPPAGMSNLEDSP*DRYPPA
Trigger: AGCTGGAGGATACCGATCCAATGGTGAATCCTCCAG...GTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCTGGAGGATTCACCATaGGATCGGTATCCTCCAGCT +
Preference number: 5 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLLEDSP*DRYPPA
Trigger: AGCTGGAGGATACCGATCCAATGGTGAATCCTCCAG...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GAGCAGGATGAGGGGTGGGAGCAGCTGATGCATGGGAGGCTGCTTATGCCCTGGTCCCTTGAATACATTTaGAAGTGTAGCTCGGTATTT +
Preference number: 5 (lower is better)
Translates to: EQDEGWEQLMHGRLLMPWSLEYI*KCSSVF
Trigger: AAATACCGAGCTACACTTCAAAATGTATTCAAGGGA...CCAGGGCATAAGCAGCCTCCCATGCATCAGCTGCTCCCACCCCTCATCCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp ACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACCGACTCAAAACAGGCTaGCCCAGACACTTGAGGTCT +
Preference number: 5 (lower is better)
Translates to: TPHQSLGHQLECQTVDGDRLKTG*PRHLRS
Trigger: AGACCTCAAGTGTCTGGGCAAGCCTGTTTTGAGTCG...GTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS CCA 90 bp ACGGTGGGCTCACCATTGGATCGGTATCCTCCAGCTCCAAATTCTTaGGAGCAAACATGGCAAAGGGTATATCCAAACTCGTCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: TVGSPLDRYPPAPNS*EQTWQRVYPNSSGS
Trigger: TGACCCTGACGAGTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGAGGATACCGATCCAATGGTGAGCCCACCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS CCA 90 bp GTGATGGTGCCCACAGGGGTGCCCACTGTCCCAACACGAACTGTCTaGAAGCCTAGGAGAAGAGATACATTATTAGCTTCTTTTGCAGAG +
Preference number: 5 (lower is better)
Translates to: VMVPTGVPTVPTRTV*KPRRRDTLLASFAE
Trigger: CTCTGCAAAAGAAGCTAATAATGTATCTCTTCTCCTAGGCTTCCAGACAGTTCGTGTTGGGACAGTGGGCACCCCTGTGGGCACCATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527907.5
ENST00000528984.5
CDS-3UTR CAA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTAGCCTGGACAATCACTaGGACAGTCTTGAGGGCAAA +
Preference number: 5 (lower is better)
Translates to: RGGSGFGVLILGRQACHISLDNH*DSLEGK
Trigger: TTTGCCCTCAAGACTGTCCAAGTGATTGTCCAGGCT...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp CACCCAGGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGACATATTCATGCCCTaGTTTCCTGGAGAGCCTATA +
Preference number: 5 (lower is better)
Translates to: HPGLPGLPEWSQSLCRNCDIFMP*FPGEPI
Trigger: TATAGGCTCTCCAGGAAACAAGGGCATGAATATGTC...ACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp TACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCCAACTGGGCGACATATTCATGCCCTaGTTTCCTGGAGAGCCTATA +
Preference number: 5 (lower is better)
Translates to: YEGSSHLQGQHVSLLQLGDIFMP*FPGEPI
Trigger: TATAGGCTCTCCAGGAAACAAGGGCATGAATATGTC...GCCCAGTTGGAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp GGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTGCCAGATGGGGTCCTCTCAAATaGCCTGGTAGACATGAATGC +
Preference number: 5 (lower is better)
Translates to: GSGFGVLILGRQACHIARWGPLK*PGRHEC
Trigger: GCATTCATGTCTACCAGGCAATTTGAGAGGACCCCA...TCTGGCAATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp ACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACGGTGGTACACACTTCTaGAGAGTCTTCTACAGACGG +
Preference number: 5 (lower is better)
Translates to: TPHQSLGHQLECQTVDGDGGTHF*RVFYRR
Trigger: CCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCACC...GTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
ENST00000531933.1
CDS-3UTR CAA 90 bp CACCCGACTCAAAACAGGCTTGCCCAGACACTTGAGGTCTTTCTGCGCTTCACAACCTGGTTAATGGGTTaGTTGACAAAAGCCCCCACT +
Preference number: 5 (lower is better)
Translates to: HPTQNRLAQTLEVFLRFTTWLMG*LTKAPT
Trigger: AGTGGGGGCTTTTGTCAACAAACCCATTAACCAGGT...TGTGAAGCGCAGAAAGACCTCAAGTGTCTGGGCAAGCCTGTTTTGAGTCGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR CAA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTTCCAGCTCCAAATTCTaGGGAGCAAACATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSSSSKF*GANMAK
Trigger: CTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGA...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp AGACACTTGAGGTCTTTCTGCGCTTCACAACGCACCACTCTCCCCTTTCCCAGATGTAGATGCCAAAGATaGCTGCCTCAGACAATGGCT +
Preference number: 5 (lower is better)
Translates to: RHLRSFCASQRTTLPFPRCRCQR*LPQTMA
Trigger: AGCCATTGTCTGAGGCAGCAATCTTTGGCATCTACA...TCTGGGAAAGGGGAGAGTGGTGCGTTGTGAAGCGCAGAAAGACCTCAAGTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS TCA 90 bp TTTATAGTCTGTGGGGGATTAGTGACTCTGGCTCAGGAAGAACAATaGCTAGCGCACCATCTACTGGGAACTCGTAGTCAACGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: FIVCGGLVTLAQEEQ*LAHHLLGTRSQRWA
Trigger: AGCCCACCGTTGACTACGAGTTCCCAGTAGATGGTGCGCTAGTCATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACAGACTATAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS CCA 90 bp GTAATGAGTCCAAGTCTTCAGCCATGGACTGTGCTCCAATATCTATaGAGAGGCTGCTCAGCTGAGGTGGGTTCTGAAACTCCCGATAGA +
Preference number: 5 (lower is better)
Translates to: VMSPSLQPWTVLQYL*RGCSAEVGSETPDR
Trigger: TCTATCGGGAGTTTCAGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATATTGGAGCACAGTCCATGGCTGAAGACTTGGACTCATTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000683050.1
CDS CCA 90 bp TCCCAGGAACCATCAGCTGGGATGGTGGGGAGGTGGAAAAAGAGGTaGTACACACTTCTTGAGAGTCTTCTACAGACGGGTATATTACTC +
Preference number: 5 (lower is better)
Translates to: SQEPSAGMVGRWKKR*YTLLESLLQTGILL
Trigger: GAGTAATATACCCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCTCCCCACCATCCCAGCTGATGGTTCCTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000524625.5
ENST00000527907.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
CDS-3UTR CAA 90 bp CACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACAGCAGGTTTCTGTCCTGGGAATaGAGATCAGTTTCCATTGCC +
Preference number: 5 (lower is better)
Translates to: HQSLGHQLECQTVDGDSRFLSWE*RSVSIA
Trigger: GGCAATGGAAACTGATCTCAATTCCCAGGACAGAAA...CCTGCTGTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp CAGGAAGTAAAGGGGACAATGAAGAGAGCTAAGGGACTCCTTCCTTCTTCCTCCGGTGGTACACACTTCTaGAGAGTCTTCTACAGACGG +
Preference number: 5 (lower is better)
Translates to: QEVKGTMKRAKGLLPSSSGGTHF*RVFYRR
Trigger: CCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCACC...GGAGGAAGAAGGAAGGAGTCCCTTAGCTCTCTTCATTGTCCCCTTTACTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp ACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACTCCAGCTCCAAATTCTaGGGAGCAAACATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: TPHQSLGHQLECQTVDGDSSSKF*GANMAK
Trigger: CTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGA...GTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp CACCCAGGACTTCCTGGGCTGCCAGAATGGAGTCAGTCACTCTGCAGAAACTGTGGTGAGGCTAGGCACTaGACTTATTCAAGTAACAAT +
Preference number: 5 (lower is better)
Translates to: HPGLPGLPEWSQSLCRNCGEARH*TYSSNN
Trigger: ATTGTTACTTGAATAAGTCAAGTGCCTAGCCTCACC...ACAGTTTCTGCAGAGTGACTGACTCCATTCTGGCAGCCCAGGAAGTCCTGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAAAGGCAGGAGAATCACTaGAGTCCAAGATGCTGCGAA +
Preference number: 5 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKRQENH*SPRCCE
Trigger: TTCGCAGCATCTTGGACTCAAGTGATTCTCCTGCCT...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524625.5
CDS CCA 90 bp CTGGAGGATTCACCATTGGATCGGTATCCTCCAGCTCCAAATTCTTaGGAGCAAACATGGCAAAGGGTATATCCAAACTCGTCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: LEDSPLDRYPPAPNS*EQTWQRVYPNSSGS
Trigger: TGACCCTGACGAGTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGAGGATACCGATCCAATGGTGAATCCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS-3UTR CAA 90 bp AGGGGTGGGAGTGGTTTTGGAGTTCTGATCTTGGGTAGGCAGGCCTGTCATATTTTTCTGTCCTGGGAATaGAGATCAGTTTCCATTGCC +
Preference number: 5 (lower is better)
Translates to: RGGSGFGVLILGRQACHIFLSWE*RSVSIA
Trigger: GGCAATGGAAACTGATCTCAATTCCCAGGACAGAAA...AATATGACAGGCCTGCCTACCCAAGATCAGAACTCCAAAACCACTCCCACCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp CTGAGGGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTACCTCTGGGATGTCTTaGATTGCTAAGTTGAACCAA +
Preference number: 5 (lower is better)
Translates to: LRAFSYEGSSHLQGQHVSTSGMS*IAKLNQ
Trigger: TTGGTTCAACTTAGCAATCAAAGACATCCCAGAGGT...ACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp ACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGGATGGTGACGACATATTCATGCCCTaGTTTCCTGGAGAGCCTATA +
Preference number: 5 (lower is better)
Translates to: TPHQSLGHQLECQTVDGDDIFMP*FPGEPI
Trigger: TATAGGCTCTCCAGGAAACAAGGGCATGAATATGTC...GTCACCATCCACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp GGCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTGACATATTCATGCCCTaGTTTCCTGGAGAGCCTATA +
Preference number: 5 (lower is better)
Translates to: GFFVRRFFPSPRPARESSDIFMP*FPGEPI
Trigger: TATAGGCTCTCCAGGAAACAAGGGCATGAATATGTC...AGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp CAATATCTATGGAGAGGCTGCTCAGCTGAGGTGGGTTCTGAAACTCCCGATAGAACCTGGTTAATGGGTTaGTTGACAAAAGCCCCCACT +
Preference number: 5 (lower is better)
Translates to: QYLWRGCSAEVGSETPDRTWLMG*LTKAPT
Trigger: AGTGGGGGCTTTTGTCAACAAACCCATTAACCAGGT...TCTATCGGGAGTTTCAGAACCCACCTCAGCTGAGCAGCCTCTCCATAGATATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR CAA 90 bp AGACACTTGAGGTCTTTCTGCGCTTCACAACGCACCACTCTCCCCTTTCCCAGAGGTGAGGCTAGGCACTaGACTTATTCAAGTAACAAT +
Preference number: 5 (lower is better)
Translates to: RHLRSFCASQRTTLPFPRGEARH*TYSSNN
Trigger: ATTGTTACTTGAATAAGTCAAGTGCCTAGCCTCACC...TCTGGGAAAGGGGAGAGTGGTGCGTTGTGAAGCGCAGAAAGACCTCAAGTGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS-3UTR CAA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAATGTAGATGCCAAAGATaGCTGCCTCAGACAATGGCT +
Preference number: 5 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKCRCQR*LPQTMA
Trigger: AGCCATTGTCTGAGGCAGCAATCTTTGGCATCTACA...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp TTCCTCTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAATTTCTGTCCTGGGAATaGAGATCAGTTTCCATTGCC +
Preference number: 5 (lower is better)
Translates to: FLFLRLHTNLLATSWNVKFLSWE*RSVSIA
Trigger: GGCAATGGAAACTGATCTCAATTCCCAGGACAGAAA...TTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCACCTCTGGGATGTCTTaGATTGCTAAGTTGAACCAA +
Preference number: 5 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLTSGMS*IAKLNQ
Trigger: TTGGTTCAACTTAGCAATCAAAGACATCCCAGAGGT...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
CDS-3UTR CAA 90 bp CTTTCTGCGACTCCACACCAATCTCTTGGCCACCAGCTGGAATGTCAAACAGTGACCTCTGGGATGTCTTaGATTGCTAAGTTGAACCAA +
Preference number: 5 (lower is better)
Translates to: LSATPHQSLGHQLECQTVTSGMS*IAKLNQ
Trigger: TTGGTTCAACTTAGCAATCAAAGACATCCCAGAGGT...CACTGTTTGACATTCCAGCTGGTGGCCAAGAGATTGGTGTGGAGTCGCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000529655.5
CDS-3UTR CAA 90 bp GCTCTCACCAGGAATACGCAACTATCCAAGGTAAAGCCTTTAGTCAGTTCCAGTGGTGGTACACACTTCTaGAGAGTCTTCTACAGACGG +
Preference number: 5 (lower is better)
Translates to: ALTRNTQLSKVKPLVSSSGGTHF*RVFYRR
Trigger: CCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCACC...ACTGGAACTGACTAAAGGCTTTACCTTGGATAGTTGCGTATTCCTGGTGAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp CTGAAACTCCCGATAGAAGGTCCCCAGGTCCATCGGAAGAATGTCATCTTTAGATCCAGCTCCAAATTCTaGGGAGCAAACATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LKLPIEGPQVHRKNVIFRSSSKF*GANMAK
Trigger: CTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGA...TCTAAAGATGACATTCTTCCGATGGACCTGGGGACCTTCTATCGGGAGTTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529395.1
CDS-3UTR CAA 90 bp TCCCAAGCTCAGCTCAAAGTCATGGCTGAGACTCTTCACAGATGGAGCCCTGGTTCCCTTGAATACATTTaGAAGTGTAGCTCGGTATTT +
Preference number: 5 (lower is better)
Translates to: SQAQLKVMAETLHRWSPGSLEYI*KCSSVF
Trigger: AAATACCGAGCTACACTTCAAAATGTATTCAAGGGA...ACCAGGGCTCCATCTGTGAAGAGTCTCAGCCATGACTTTGAGCTGAGCTTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS GCA 90 bp CAAATTGCCTGTAATACAATAAGCAGATTCCAGTATTTGTTAGAATaGCTTTCCAGCCCCCACAAAGTCCTCAGAGGGCCCCTCACCTTA +
Preference number: 5 (lower is better)
Translates to: QIACNTISRFQYLLE*LSSPHKVLRGPLTL
Trigger: TAAGGTGAGGGGCCCTCTGAGGACTTTGTGGGGGCTGGAAAGGCATTCTAACAAATACTGGAATCTGCTTATTGTATTACAGGCAATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528704.1
CDS-3UTR CAA 90 bp GGACAAGAGGAAGAGAACTTTGCTGTGACTCCAAGTGACAAAATCCTAGAGATTTGGGGTCCTCTCAAATaGCCTGGTAGACATGAATGC +
Preference number: 5 (lower is better)
Translates to: GQEEENFAVTPSDKILEIWGPLK*PGRHEC
Trigger: GCATTCATGTCTACCAGGCAATTTGAGAGGACCCCA...AATCTCTAGGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTTCCTCTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS-3UTR CAA 90 bp GCTTTTTCGTACGAAGGTTCTTCCCATCTCCAAGGCCAGCACGTGAGTCTTCTCTCCCTTGAATACATTTaGAAGTGTAGCTCGGTATTT +
Preference number: 5 (lower is better)
Translates to: AFSYEGSSHLQGQHVSLLSLEYI*KCSSVF
Trigger: AAATACCGAGCTACACTTCAAAATGTATTCAAGGGA...GAGAAGACTCACGTGCTGGCCTTGGAGATGGGAAGAACCTTCGTACGAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS CCA 90 bp TACGTTCTGGACAAACTGGCTCTGGGACACTCAAATTCTCCAATCTaGCAACTGCACTCTCTCTTTATTCTTCTGAAGGTACTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: YVLDKLALGHSNSPI*QLHSLFILLKVLLS
Trigger: TGAAAGCAGTACCTTCAGAAGAATAAAGAGAGAGTGCAGTTGCCAGATTGGAGAATTTGAGTGTCCCAGAGCCAGTTTGTCCAGAACGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528704.1
CDS-3UTR CAA 90 bp ATTCTCCAACTGAATATTCAAATTCAAGCCCCTGATAGGGGACCAGGGAAAGAGGACATATTCATGCCCTaGTTTCCTGGAGAGCCTATA +
Preference number: 5 (lower is better)
Translates to: ILQLNIQIQAPDRGPGKEDIFMP*FPGEPI
Trigger: TATAGGCTCTCCAGGAAACAAGGGCATGAATATGTC...CTCTTTCCCTGGTCCCCTATCAGGGGCTTGAATTTGAATATTCAGTTGGAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359513.8
CDS GCA 90 bp CGAGACCGCATCTCTTTAAACAGAAATTTGTGCCATATCCAATTCTaGCTGTTACTTAGTATCTTTGGGACGACACAGCCTATAGTCCCA +
Preference number: 5 (lower is better)
Translates to: RDRISLNRNLCHIQF*LLLSIFGTTQPIVP
Trigger: TGGGACTATAGGCTGTGTCGTCCCAAAGATACTAAGTAACAGGCAGAATTGGATATGGCACAAATTTCTGTTTAAAGAGATGCGGTCTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530942.1
CDS GCA 90 bp CGAGACCGCATCTCTTTAAACAGAAATTTGTGCCATATCCAATTCTaGCTGTTACTTAGTATCTTTGGGACGACACAGCCCAGAGATTTA +
Preference number: 5 (lower is better)
Translates to: RDRISLNRNLCHIQF*LLLSIFGTTQPRDL
Trigger: TAAATCTCTGGGCTGTGTCGTCCCAAAGATACTAAGTAACAGGCAGAATTGGATATGGCACAAATTTCTGTTTAAAGAGATGCGGTCTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526715.5
CDS CCA 90 bp CCCAGACCGTCTTTCCCTGAATTATTTGGCCTATTGTGTAATCTCTaGCATTATCCACTTAGCATGTTAAGTGCAGCAGCCTTAATTTCA +
Preference number: 5 (lower is better)
Translates to: PRPSFPELFGLLCNL*HYPLSMLSAAALIS
Trigger: TGAAATTAAGGCTGCTGCACTTAACATGCTAAGTGGATAATGCCAGAGATTACACAATAGGCCAAATAATTCAGGGAAAGACGGTCTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528984.5
CDS-3UTR CAA 90 bp GGACAAGAGGAAGAGAACTTTGCTGTGACTCCAAGTGACAAAATCCTAGAGATTACCTCTGGGATGTCTTaGATTGCTAAGTTGAACCAA +
Preference number: 5 (lower is better)
Translates to: GQEEENFAVTPSDKILEITSGMS*IAKLNQ
Trigger: TTGGTTCAACTTAGCAATCAAAGACATCCCAGAGGT...AATCTCTAGGATTTTGTCACTTGGAGTCACAGCAAAGTTCTCTTCCTCTTGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
CDS TCA 90 bp TTCATTTCAAGACACCATATTTCCAGCTCCATGGAATCTCCCATATaGCTATCATTTTATCCAACCAGTCCTCCAATTCTTGGACATAAA +
Preference number: 5 (lower is better)
Translates to: FISRHHISSSMESPI*LSFYPTSPPILGHK
Trigger: TTTATGTCCAAGAATTGGAGGACTGGTTGGATAAAATGATAGTCATATGGGAGATTCCATGGAGCTGGAAATATGGTGTCTTGAAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525850.1
CDS CCA 90 bp TATCACACTTTTCATTCATTTCAAGACACCATATTTCCAGCTCCATaGAATCTCCCATATGACTATCATTTTATCCAACCAGTCCTCCAA +
Preference number: 5 (lower is better)
Translates to: YHTFHSFQDTIFPAP*NLPYDYHFIQPVLQ
Trigger: TTGGAGGACTGGTTGGATAAAATGATAGTCATATGGGAGATTCCATGGAGCTGGAAATATGGTGTCTTGAAATGAATGAAAAGTGTGATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525850.1
CDS CAA 90 bp CCTGGCTCGCAGGCCCCAGACGTTTTGCTCCTAAGACTCCGCGAGTaGTCGCACCCACGTCGACTGGCGCTCTTCAGTGCTTCCCTCACT +
Preference number: 6 (lower is better)
Translates to: PGSQAPDVLLLRLRE*SHPRRLALFSASLT
Trigger: AGTGAGGGAAGCACTGAAGAGCGCCAGTCGACGTGGGTGCGACAACTCGCGGAGTCTTAGGAGCAAAACGTCTGGGGCCTGCGAGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000526715.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000530942.1
ENST00000533325.5
ENST00000534610.5
ENST00000577256.5
ENST00000578626.5
ENST00000579280.1
ENST00000580238.5
ENST00000581416.5
ENST00000581438.5
ENST00000582547.5
ENST00000583249.5
ENST00000683050.1
CDS CCA 72 bp CCCACGTCGACTGGCGCTCTTCAGTGCTTCCCTCACTaGTTAAGCGGTCACTCCCGCCTTAAGCCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: PTSTGALQCFPH*LSGHSRLKPSS
Trigger: GCTGCTGGGCTTAAGGCGGGAGTGACCGCTTAACCAGTGAGGGAAGCACTGAAGAGCGCCAGTCGACGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000526715.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000530942.1
ENST00000533325.5
ENST00000534610.5
ENST00000577256.5
ENST00000578626.5
ENST00000579280.1
ENST00000580238.5
ENST00000581416.5
ENST00000581438.5
ENST00000582547.5
ENST00000583249.5
ENST00000683050.1
CDS CCA 72 bp ACAGGTCGTTCCACTGCGAAGCTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACGGAGGCCGGGACCTGG +
Preference number: 6 (lower is better)
Translates to: TGRSTAKLRHKE*FRALITEAGTW
Trigger: CCAGGTCCCGGCCTCCGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAGCTTCGCAGTGGAACGACCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000529655.5
ENST00000577256.5
ENST00000580238.5
ENST00000581416.5
ENST00000582547.5
CDS CCA 72 bp ACTACACTCCAGCCTGCGAAGCTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACGGAGGCCGGGACCTGG +
Preference number: 6 (lower is better)
Translates to: TTLQPAKLRHKE*FRALITEAGTW
Trigger: CCAGGTCCCGGCCTCCGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAGCTTCGCAGGCTGGAGTGTAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579280.1
CDS CAA 90 bp GTTGCCAGTCTCTCCTGGTCAGCCTGGGTACCATGGACAGGCTGGTaGGGAGCAAGGGGTACCCCACCTTCCTTCCCAGGAACCATCAGC +
Preference number: 6 (lower is better)
Translates to: VASLSWSAWVPWTGW*GARGTPPSFPGTIS
Trigger: GCTGATGGTTCCTGGGAAGGAAGGTGGGGTACCCCTTGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAGACTGGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS CAA 90 bp TGGAGGGTGTGGCAGCACAGTGGGTTCTGTCAGAAGGGGTGCAGGTaGCCAGTCTCTCCTGGTCAGCCTGGGTACCATGGACAGGCTGGT +
Preference number: 6 (lower is better)
Translates to: WRVWQHSGFCQKGCR*PVSPGQPGYHGQAG
Trigger: ACCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAGACTGGCAACCTGCACCCCTTCTGACAGAACCCACTGTGCTGCCACACCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS GCA 72 bp CGAGTTGTCGCACCCACGTCGACTGGCGCTCTTCAGTaGTTCCCTCACTGGTTAAGCGGTCACTCCCGCCTT +
Preference number: 6 (lower is better)
Translates to: RVVAPTSTGALQ*FPHWLSGHSRL
Trigger: AAGGCGGGAGTGACCGCTTAACCAGTGAGGGAAGCACTGAAGAGCGCCAGTCGACGTGGGTGCGACAACTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000526715.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000530942.1
ENST00000533325.5
ENST00000534610.5
ENST00000577256.5
ENST00000578626.5
ENST00000579280.1
ENST00000580238.5
ENST00000581416.5
ENST00000581438.5
ENST00000582547.5
ENST00000583249.5
ENST00000683050.1
CDS GCA 72 bp AGGGTGTGGCAGCACAGTGGGTTCTGTCAGAAGGGGTaGAGGTTGCCAGTCTCTCCTGGTCAGCCTGGGTAC +
Preference number: 6 (lower is better)
Translates to: RVWQHSGFCQKG*RLPVSPGQPGY
Trigger: GTACCCAGGCTGACCAGGAGAGACTGGCAACCTGCACCCCTTCTGACAGAACCCACTGTGCTGCCACACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS CCA 72 bp TCTCCTGGTCAGCCTGGGTACCATGGACAGGCTGGTTaGGAGCAAGGGGTACCCCACCTTCCTTCCCAGGAA +
Preference number: 6 (lower is better)
Translates to: SPGQPGYHGQAG*EQGVPHLPSQE
Trigger: TTCCTGGGAAGGAAGGTGGGGTACCCCTTGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS CCA 72 bp TCACTTGGACAGTCTGCGAAGCTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACGGAGGCCGGGACCTGG +
Preference number: 6 (lower is better)
Translates to: SLGQSAKLRHKE*FRALITEAGTW
Trigger: CCAGGTCCCGGCCTCCGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAGCTTCGCAGACTGTCCAAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530500.5
CDS CCA 72 bp CAACAGAGCAAGACTGCGAAGCTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACGGAGGCCGGGACCTGG +
Preference number: 6 (lower is better)
Translates to: QQSKTAKLRHKE*FRALITEAGTW
Trigger: CCAGGTCCCGGCCTCCGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAGCTTCGCAGTCTTGCTCTGTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583249.5
CDS CAA 72 bp CAGGCCCCAGACGTTTTGCTCCTAAGACTCCGCGAGTaGTCGCACCCACGTCGACTGGCGCTCTTCAGTGCT +
Preference number: 6 (lower is better)
Translates to: QAPDVLLLRLRE*SHPRRLALFSA
Trigger: AGCACTGAAGAGCGCCAGTCGACGTGGGTGCGACAACTCGCGGAGTCTTAGGAGCAAAACGTCTGGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000526715.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000530942.1
ENST00000533325.5
ENST00000534610.5
ENST00000577256.5
ENST00000578626.5
ENST00000579280.1
ENST00000580238.5
ENST00000581416.5
ENST00000581438.5
ENST00000582547.5
ENST00000583249.5
ENST00000683050.1
CDS CAA 90 bp GTTGCCAGTCTCTCCTGGTCAGCCTGGGTACCATGGACAGGCTGGTaGGGAGCAAGGGGTACCCCACCTTCCTTCCCAGGAACCATCAGT +
Preference number: 6 (lower is better)
Translates to: VASLSWSAWVPWTGW*GARGTPPSFPGTIS
Trigger: ACTGATGGTTCCTGGGAAGGAAGGTGGGGTACCCCTTGCTCCCAACCAGCCTGTCCATGGTACCCAGGCTGACCAGGAGAGACTGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525009.5
CDS CCA 72 bp ACAAAGCAAAACCCTGCGAAGCTGCGGCACAAAGAGTaGTTCCGGGCTCTCATTACGGAGGCCGGGACCTGG +
Preference number: 6 (lower is better)
Translates to: TKQNPAKLRHKE*FRALITEAGTW
Trigger: CCAGGTCCCGGCCTCCGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAGCTTCGCAGGGTTTTGCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530942.1
CDS TCA 72 bp GCCAGCAGCAAACACTACTGGATAAGCCAGGTCAGCTaGTCCAACGCCCAGGGCAGCAGGCTGATAGGAAAG +
Preference number: 6 (lower is better)
Translates to: ASSKHYWISQVS*SNAQGSRLIGK
Trigger: CTTTCCTATCAGCCTGCTGCCCTGGGCGTTGGATCAGCTGACCTGGCTTATCCAGTAGTGTTTGCTGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359513.8
ENST00000526508.5
ENST00000528494.5
ENST00000683050.1
CDS GCA 72 bp CATGGACCTCCCGACTGCAGGCAGCTGTCCTGCCAGTaGCTTCTTTGCTTCATGTGTAACCTCTGGGATGTC +
Preference number: 6 (lower is better)
Translates to: HGPPDCRQLSCQ*LLCFMCNLWDV
Trigger: GACATCCCAGAGGTTACACATGAAGCAAAGAAGGCACTGGCAGGACAGCTGCCTGCAGTCGGGAGGTCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000359513.8
ENST00000395549.3
ENST00000524625.5
ENST00000526508.5
ENST00000528145.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533325.5
ENST00000534610.5
ENST00000683050.1
CDS CCA 72 bp TCAGTATCCTCACTACTGGAGGGTGTGGCAGCACAGTaGGTTCTGTCAGAAGGGGTGCAGGTTGCCAGTCTC +
Preference number: 6 (lower is better)
Translates to: SVSSLLEGVAAQ*VLSEGVQVASL
Trigger: GAGACTGGCAACCTGCACCCCTTCTGACAGAACCCACTGTGCTGCCACACCCTCCAGTAGTGAGGATACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS TCA 72 bp GACATCGTGAGGGGAGGCCCGTCCCTCACTGCTGTTTaGTACGGTTTCAGTATCCTCACTACTGGAGGGTGT +
Preference number: 6 (lower is better)
Translates to: DIVRGGPSLTAV*YGFSILTTGGC
Trigger: ACACCCTCCAGTAGTGAGGATACTGAAACCGTATCAAACAGCAGTGAGGGACGGGCCTCCCCTCACGATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS TCA 72 bp CCCACTTTTCGGACAAAGATGGTCTCCAAGACATCGTaGGGGGAGGCCCGTCCCTCACTGCTGTTTGATACG +
Preference number: 6 (lower is better)
Translates to: PTFRTKMVSKTS*GEARPSLLFDT
Trigger: CGTATCAAACAGCAGTGAGGGACGGGCCTCCCCTCACGATGTCTTGGAGACCATCTTTGTCCGAAAAGTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529395.1
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS GCA 72 bp GCAGGAGAATCACTTGAGTCCAAGATGCTGCGAAGCTaGGGCACAAAGAGTGGTTCCGGGCTCTCATTACGG +
Preference number: 6 (lower is better)
Translates to: AGESLESKMLRS*GTKSGSGLSLR
Trigger: CCGTAATGAGAGCCCGGAACCACTCTTTGTGCCGCAGCTTCGCAGCATCTTGGACTCAAGTGATTCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000524625.5
ENST00000578626.5
ENST00000683050.1
CDS CCA 72 bp CTAGCGCACCATCTACTGGGAACTCGTAGTCAACGGTaGGCTCACCATTGGATCGGTATCCTCCAGCTCCAA +
Preference number: 6 (lower is better)
Translates to: LAHHLLGTRSQR*AHHWIGILQLQ
Trigger: TTGGAGCTGGAGGATACCGATCCAATGGTGAGCCCACCGTTGACTACGAGTTCCCAGTAGATGGTGCGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS CAA 72 bp AGACATCGTGAGGGGAGGCCCGTCCCTCACTGCTGTTaGATACGGTTTCAGTATCCTCACTACTGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: RHREGRPVPHCC*IRFQYPHYWRV
Trigger: CACCCTCCAGTAGTGAGGATACTGAAACCGTATCAAACAGCAGTGAGGGACGGGCCTCCCCTCACGATGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS GCA 72 bp TCTCCAAGACATCGTGAGGGGAGGCCCGTCCCTCACTaGTGTTTGATACGGTTTCAGTATCCTCACTACTGG +
Preference number: 6 (lower is better)
Translates to: SPRHREGRPVPH*CLIRFQYPHYW
Trigger: CCAGTAGTGAGGATACTGAAACCGTATCAAACAGCAGTGAGGGACGGGCCTCCCCTCACGATGTCTTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000529395.1
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS CCA 72 bp CTACTGGGAACTCGTAGTCAACGGTGGGCTCACCATTaGATCGGTATCCTCCAGCTCCAAATTCTTGGGAGC +
Preference number: 6 (lower is better)
Translates to: LLGTRSQRWAHH*IGILQLQILGS
Trigger: GCTCCCAAGAATTTGGAGCTGGAGGATACCGATCCAATGGTGAGCCCACCGTTGACTACGAGTTCCCAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS TCA 72 bp ACCCTCAGGGTGTCCGTCACCACAGGAGTAGGGGTCTaGAAATGTGCCTTTGTGACAGTAAACACACACTGG +
Preference number: 6 (lower is better)
Translates to: TLRVSVTTGVGV*KCAFVTVNTHW
Trigger: CCAGTGTGTGTTTACTGTCACAAAGGCACATTTTCAGACCCCTACTCCTGTGGTGACGGACACCCTGAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000528494.5
ENST00000528984.5
ENST00000683050.1
CDS CCA 72 bp CCTTCCCAGGAACCATCAGCTGGGATGGTGGGGAGGTaGAAAAAGAGGTGGTACACACTTCTTGAGAGTCTT +
Preference number: 6 (lower is better)
Translates to: PSQEPSAGMVGR*KKRWYTLLESL
Trigger: AAGACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCTCCCCACCATCCCAGCTGATGGTTCCTGGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000524625.5
ENST00000527907.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
CDS CCA 72 bp GATGAACGAGTGCAAATCTTTTCACCAAGCCGAGCCTaGACAATCACTTGGACAGTCTGCGAAGCTGCGGCA +
Preference number: 6 (lower is better)
Translates to: DERVQIFSPSRA*TITWTVCEAAA
Trigger: TGCCGCAGCTTCGCAGACTGTCCAAGTGATTGTCCAGGCTCGGCTTGGTGAAAAGATTTGCACTCGTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530500.5
CDS CAA 90 bp AACGGTGGGCTCACCATTGGATCGGTATCCTCCAGCTCCAAATTCTaGGGAGCAAACATGGCAAAGGGTATATCCAAACTCGTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: NGGLTIGSVSSSSKF*GANMAKGISKLVRV
Trigger: GACCCTGACGAGTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGAGGATACCGATCCAATGGTGAGCCCACCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS CAA 90 bp CAGCTGGGATGGTGGGGAGGTGGAAAAAGAGGTGGTACACACTTCTaGAGAGTCTTCTACAGACGGGTATATTACTCCAGTGTCCTCACC +
Preference number: 6 (lower is better)
Translates to: QLGWWGGGKRGGTHF*RVFYRRVYYSSVLT
Trigger: GGTGAGGACACTGGAGTAATATACCCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCTCCCCACCATCCCAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000524625.5
ENST00000527907.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
CDS TCA 72 bp TTCCAGCTCCATGGAATCTCCCTCAGAAGTCTTAAGTaGAATCTCCACACACATGGACCTCCCGACTGCAGG +
Preference number: 6 (lower is better)
Translates to: FQLHGISLRSLK*NLHTHGPPDCR
Trigger: CCTGCAGTCGGGAGGTCCATGTGTGTGGAGATTTCACTTAAGACTTCTGAGGGAGATTCCATGGAGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000359513.8
ENST00000395549.3
ENST00000524625.5
ENST00000526508.5
ENST00000528145.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533325.5
ENST00000534610.5
ENST00000683050.1
CDS GCA 72 bp AAAGGGGGTGCTGCTGGGACTCAAGGATACTTTTACTaGAGGGTTTCCACAAAGGCATCAAACTCGCGGACA +
Preference number: 6 (lower is better)
Translates to: KGGAAGTQGYFY*RVSTKASNSRT
Trigger: TGTCCGCGAGTTTGATGCCTTTGTGGAAACCCTGCAGTAAAAGTATCCTTGAGTCCCAGCAGCACCCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000531933.1
ENST00000683050.1
CDS CCA 72 bp CCCACAGGGGTGCCCACTGTCCCAACACGAACTGTCTaGAAGCCTAGGAGAAGAGATACATTATTAGCTTCT +
Preference number: 6 (lower is better)
Translates to: PTGVPTVPTRTV*KPRRRDTLLAS
Trigger: AGAAGCTAATAATGTATCTCTTCTCCTAGGCTTCCAGACAGTTCGTGTTGGGACAGTGGGCACCCCTGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527907.5
ENST00000528704.1
ENST00000528984.5
CDS CAA 90 bp TCCAGCCCCCACAAAGTCCTCAGAGGGCCCCTCACCTTACATCTGTaGGCAGGCACTACCAGAGCTTTAACTATCACAATCCCTAAATAT +
Preference number: 6 (lower is better)
Translates to: SSPHKVLRGPLTLHL*AGTTRALTITIPKY
Trigger: ATATTTAGGGATTGTGATAGTTAAAGCTCTGGTAGTGCCTGCCAACAGATGTAAGGTGAGGGGCCCTCTGAGGACTTTGTGGGGGCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528704.1
CDS CAA 90 bp TACCTGGGATGGTGGGGAGGTGGAAAAAGAGGTGGTACACACTTCTaGAGAGTCTTCTACAGACGGGTATATTACTCCAGTGTCCTCACC +
Preference number: 6 (lower is better)
Translates to: YLGWWGGGKRGGTHF*RVFYRRVYYSSVLT
Trigger: GGTGAGGACACTGGAGTAATATACCCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCTCCCCACCATCCCAGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534610.5
CDS TCA 72 bp TGTGGGGGATTAGTGACTCTGGCTCAGGAAGAACAATaGCTAGCGCACCATCTACTGGGAACTCGTAGTCAA +
Preference number: 6 (lower is better)
Translates to: CGGLVTLAQEEQ*LAHHLLGTRSQ
Trigger: TTGACTACGAGTTCCCAGTAGATGGTGCGCTAGTCATTGTTCTTCCTGAGCCAGAGTCACTAATCCCCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529395.1
ENST00000532067.1
CDS CCA 72 bp CGGTATCCTCCAGCTCCAAATTCTTGGGAGCAAACATaGCAAAGGGTATATCCAAACTCGTCAGGGTCACCT +
Preference number: 6 (lower is better)
Translates to: RYPPAPNSWEQT*QRVYPNSSGSP
Trigger: AGGTGACCCTGACGAGTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGAGGATACCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000528494.5
ENST00000529395.1
ENST00000529655.5
ENST00000530500.5
ENST00000532067.1
ENST00000533316.1
ENST00000683050.1
CDS CCA 72 bp CCAGCTTCTCTGGTAATGAGTCCAAGTCTTCAGCCATaGACTGTGCTCCAATATCTATGGAGAGGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: PASLVMSPSLQP*TVLQYLWRGCS
Trigger: TGAGCAGCCTCTCCATAGATATTGGAGCACAGTCCATGGCTGAAGACTTGGACTCATTACCAGAGAAGCTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000683050.1
CDS CCA 72 bp GATGGGGAAGTAGGGTGTAGGTTGATGGTGAGAAATTaGTCAGCAGGTACAAGGCCACAGTTAGATAGGAGG +
Preference number: 6 (lower is better)
Translates to: DGEVGCRLMVRN*SAGTRPQLDRR
Trigger: CCTCCTATCTAACTGTGGCCTTGTACCTGCTGACCAATTTCTCACCATCAACCTACACCCTACTTCCCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395549.3
CDS CCA 72 bp GCTTCTCTGGTAATGAGTCCTGGGATGGTGGGGAGGTaGAAAAAGAGGTGGTACACACTTCTTGAGAGTCTT +
Preference number: 6 (lower is better)
Translates to: ASLVMSPGMVGR*KKRWYTLLESL
Trigger: AAGACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCTCCCCACCATCCCAGGACTCATTACCAGAGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531933.1
CDS CAA 72 bp CACAAAGTCCTCAGAGGGCCCCTCACCTTACATCTGTaGGCAGGCACTACCAGAGCTTTAACTATCACAATC +
Preference number: 6 (lower is better)
Translates to: HKVLRGPLTLHL*AGTTRALTITI
Trigger: GATTGTGATAGTTAAAGCTCTGGTAGTGCCTGCCAACAGATGTAAGGTGAGGGGCCCTCTGAGGACTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528704.1
CDS CAA 90 bp TCTGGAGGATTCACCATTGGATCGGTATCCTCCAGCTCCAAATTCTaGGGAGCAAACATGGCAAAGGGTATATCCAAACTCGTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: SGGFTIGSVSSSSKF*GANMAKGISKLVRV
Trigger: GACCCTGACGAGTTTGGATATACCCTTTGCCATGTTTGCTCCCAAGAATTTGGAGCTGGAGGATACCGATCCAATGGTGAATCCTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000525009.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000683050.1
CDS GCA 72 bp ACCAATCTGAACCCGTTGGAGAAGATGATGAACGAGTaGAAATCTTTTCACCAAGCCGAGCCTGGACAATCA +
Preference number: 6 (lower is better)
Translates to: TNLNPLEKMMNE*KSFHQAEPGQS
Trigger: TGATTGTCCAGGCTCGGCTTGGTGAAAAGATTTGCACTCGTTCATCATCTTCTCCAACGGGTTCAGATTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000359513.8
ENST00000395549.3
ENST00000524625.5
ENST00000526508.5
ENST00000528145.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000533325.5
ENST00000534610.5
ENST00000577256.5
ENST00000683050.1
CDS CCA 72 bp ATATTCATGCCCTTGTTTCCTGGAGAGCCTATAGGCTaGTGTCACCCTAGTTATAGCAAGAAGGGACTTCAG +
Preference number: 6 (lower is better)
Translates to: IFMPLFPGEPIG*CHPSYSKKGLQ
Trigger: CTGAAGTCCCTTCTTGCTATAACTAGGGTGACACCAGCCTATAGGCTCTCCAGGAAACAAGGGCATGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000359513.8
ENST00000395549.3
ENST00000524625.5
ENST00000525850.1
ENST00000526508.5
ENST00000528145.5
ENST00000528494.5
ENST00000529655.5
ENST00000530500.5
ENST00000534610.5
ENST00000683050.1
CDS CAA 72 bp TGGTGGGGAGGTGGAAAAAGAGGTGGTACACACTTCTaGAGAGTCTTCTACAGACGGGTATATTACTCCAGT +
Preference number: 6 (lower is better)
Translates to: WWGGGKRGGTHF*RVFYRRVYYSS
Trigger: ACTGGAGTAATATACCCGTCTGTAGAAGACTCTCAAGAAGTGTGTACCACCTCTTTTTCCACCTCCCCACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000359513.8
ENST00000524625.5
ENST00000526508.5
ENST00000527907.5
ENST00000528494.5
ENST00000528984.5
ENST00000529655.5
ENST00000530500.5
ENST00000533316.1
ENST00000534610.5
ENST00000683050.1
CDS GCA 72 bp TGTAATACAATAAGCAGATTCCAGTATTTGTTAGAATaGCTTTCCAGCCCCCACAAAGTCCTCAGAGGGCCC +
Preference number: 6 (lower is better)
Translates to: CNTISRFQYLLE*LSSPHKVLRGP
Trigger: GGGCCCTCTGAGGACTTTGTGGGGGCTGGAAAGGCATTCTAACAAATACTGGAATCTGCTTATTGTATTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528704.1
CDS CCA 72 bp GACAAACTGGCTCTGGGACACTCAAATTCTCCAATCTaGCAACTGCACTCTCTCTTTATTCTTCTGAAGGTA +
Preference number: 6 (lower is better)
Translates to: DKLALGHSNSPI*QLHSLFILLKV
Trigger: TACCTTCAGAAGAATAAAGAGAGAGTGCAGTTGCCAGATTGGAGAATTTGAGTGTCCCAGAGCCAGTTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528704.1
CDS CAA 72 bp GCCCCCAGACCGTCTTTCCCTGAATTATTTGGCCTATaGTGTAATCTCTGGCATTATCCACTTAGCATGTTA +
Preference number: 6 (lower is better)
Translates to: APRPSFPELFGL*CNLWHYPLSML
Trigger: TAACATGCTAAGTGGATAATGCCAGAGATTACACAATAGGCCAAATAATTCAGGGAAAGACGGTCTGGGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000527907.5
ENST00000528984.5
CDS CCA 72 bp TCTTTCCCTGAATTATTTGGCCTATTGTGTAATCTCTaGCATTATCCACTTAGCATGTTAAGTGCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: SFPELFGLLCNL*HYPLSMLSAAA
Trigger: GGCTGCTGCACTTAACATGCTAAGTGGATAATGCCAGAGATTACACAATAGGCCAAATAATTCAGGGAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527907.5
ENST00000528984.5
CDS TCA 72 bp AGACACCATATTTCCAGCTCCATGGAATCTCCCATATaGCTATCATTTTATCCAACCAGTCCTCCAATTCTT +
Preference number: 6 (lower is better)
Translates to: RHHISSSMESPI*LSFYPTSPPIL
Trigger: AAGAATTGGAGGACTGGTTGGATAAAATGATAGTCATATGGGAGATTCCATGGAGCTGGAAATATGGTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525850.1
CDS GCA 72 bp ATCTCTTTAAACAGAAATTTGTGCCATATCCAATTCTaGCTGTTACTTAGTATCTTTGGGACGACACAGCCC +
Preference number: 6 (lower is better)
Translates to: ISLNRNLCHIQF*LLLSIFGTTQP
Trigger: GGGCTGTGTCGTCCCAAAGATACTAAGTAACAGGCAGAATTGGATATGGCACAAATTTCTGTTTAAAGAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526715.5
CDS CAA 72 bp TGTGCCATATCCAATTCTGCCTGTTACTTAGTATCTTaGGGACGACACAGCCCAGAGATTTATTTAATGAGA +
Preference number: 6 (lower is better)
Translates to: CAISNSACYLVS*GRHSPEIYLMR
Trigger: TCTCATTAAATAAATCTCTGGGCTGTGTCGTCCCAAAGATACTAAGTAACAGGCAGAATTGGATATGGCACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526715.5
CDS GCA 72 bp ATCTCTTTAAACAGAAATTTGTGCCATATCCAATTCTaGCTGTTACTTAGTATCTTTGGGACGACACAGCCT +
Preference number: 6 (lower is better)
Translates to: ISLNRNLCHIQF*LLLSIFGTTQP
Trigger: AGGCTGTGTCGTCCCAAAGATACTAAGTAACAGGCAGAATTGGATATGGCACAAATTTCTGTTTAAAGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530942.1
CDS CCA 72 bp AAAAATTTAATAAACTTGTCCAGGTCCTTTCTGTCCTaGGAATTGAGATCAGTTTCCATTGCCTATAGGAAT +
Preference number: 6 (lower is better)
Translates to: KNLINLSRSFLS*ELRSVSIAYRN
Trigger: ATTCCTATAGGCAATGGAAACTGATCTCAATTCCCAGGACAGAAAGGACCTGGACAAGTTTATTAAATTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000359513.8
ENST00000395549.3
ENST00000524625.5
ENST00000526508.5
ENST00000528494.5
ENST00000529655.5
ENST00000533325.5
ENST00000534610.5
ENST00000577256.5
ENST00000578626.5
ENST00000580238.5
ENST00000581416.5
ENST00000582547.5
ENST00000583249.5
ENST00000683050.1
CDS CCA 72 bp TTTCATTCATTTCAAGACACCATATTTCCAGCTCCATaGAATCTCCCATATGACTATCATTTTATCCAACCA +
Preference number: 6 (lower is better)
Translates to: FHSFQDTIFPAP*NLPYDYHFIQP
Trigger: TGGTTGGATAAAATGATAGTCATATGGGAGATTCCATGGAGCTGGAAATATGGTGTCTTGAAATGAATGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525850.1