RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASPG (Homo sapiens)

Ensembl gene IDs: ENSG00000166183

Ensembl transcript IDs: ENST00000546892.6, ENST00000548372.5, ENST00000549809.5, ENST00000551170.1, ENST00000551177.6, ENST00000551871.1, ENST00000552126.1, ENST00000556267.1

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCAGAGGCCTTaGGGCCAGGTCACTGCCCAGCTCAGAGCCCAGGGAGCCCCGAGC +
Preference number: 1 (lower is better)
Translates to: VCPGCSHCTPESQRP*GQVTAQLRAQGAPS
Trigger: GCTCGGGGCTCCCTGGGCTCTGAGCTGGGCAGTGACCTGGCCCCAAGGCCTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp GTGAGCGGCGCCACCCCACTGTGGGGAGGCGGGTCCCACGGGCACTaGGCACCTGGCTGTGCCTCATTCCTGAGTCTCCCACAGCCTCAC +
Preference number: 1 (lower is better)
Translates to: VSGATPLWGGGSHGH*APGCASFLSLPQPH
Trigger: GTGAGGCTGTGGGAGACTCAGGAATGAGGCACAGCCAGGTGCCCAGTGCCCGTGGGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp TCCCCCAGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGTaGGGAGGCGGGTCCCACGGGCACTGGGCACCTGGCTGTGCCTCA +
Preference number: 1 (lower is better)
Translates to: SPSVKLPGVSGATPL*GGGSHGHWAPGCAS
Trigger: TGAGGCACAGCCAGGTGCCCAGTGCCCGTGGGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCTGGGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp AGCAGGTGGGCACTGCCGTGTGCAGGAGCAACCGGGGAGACCAGGTaGGCTCAGCCCAGGGATGCCGGAGGTAGTCCCACCCCTTCTCAC +
Preference number: 1 (lower is better)
Translates to: SRWALPCAGATGETR*AQPRDAGGSPTPSH
Trigger: GTGAGAAGGGGTGGGACTACCTCCGGCATCCCTGGGCTGAGCCCACCTGGTCTCCCCGGTTGCTCCTGCACACGGCAGTGCCCACCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 90 bp CCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCCGGCCCTaGCACGCTCGCATGGCGTCACCTTGTTGTGCAAGGCCCAGGCAC +
Preference number: 1 (lower is better)
Translates to: PHGPHQGEEQRLPRP*HARMASPCCARPRH
Trigger: GTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 90 bp GGGCTCAGCCCAGGGATGCCGGAGGTAGTCCCACCCCTTCTCACCTaGACCAGGCATTTGTCCAGATGCCCCACCGCCTCTCCCAAGGCC +
Preference number: 1 (lower is better)
Translates to: GLSPGMPEVVPPLLT*TRHLSRCPTASPKA
Trigger: GGCCTTGGGAGAGGCGGTGGGGCATCTGGACAAATGCCTGGTGCAGGTGAGAAGGGGTGGGACTACCTCCGGCATCCCTGGGCTGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 90 bp ACAACCCGGAGCAGCACTGAGTGGGGTGGCGTGAGCAACAGGCTCTaGCCAGCCCCTCAGGAGCTGAGGGAAGCAGGTGGGCACTGCCGT +
Preference number: 1 (lower is better)
Translates to: TTRSSTEWGGVSNRL*PAPQELREAGGHCR
Trigger: ACGGCAGTGCCCACCTGCTTCCCTCAGCTCCTGAGGGGCTGGGCAGAGCCTGTTGCTCACGCCACCCCACTCAGTGCTGCTCCGGGTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 90 bp GCAGGACACGAACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTaGACGCCAGAGAGCCAGAGGCCTTGGGGCCAGGTCACTGCCCAG +
Preference number: 1 (lower is better)
Translates to: AGHERSKPVCPGCSH*TPESQRPWGQVTAQ
Trigger: CTGGGCAGTGACCTGGCCCCAAGGCCTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGTTCGTGTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp ACCAGGGTGAGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATaGCGTCACCTTGTTGTGCAAGGCCCAGGCACACCTGTGTCGGGG +
Preference number: 1 (lower is better)
Translates to: TRVRSKGFPGPATLA*RHLVVQGPGTPVSG
Trigger: CCCCGACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCTCACCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp GGTCTAGCCCAGTCCTGGGCAGACTCTTCCCGACGCACAGCCACTTaGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCA +
Preference number: 1 (lower is better)
Translates to: GLAQSWADSSRRTAT*MGSPRPGGSRVQHP
Trigger: TGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp TGGCTGCCCAGCCTTGTGAGGAGCTCTCCCCATCTGCCCAGCCCGTaGCCCCCAAGCCGTCTCTGCCGAACTCCATCAGTGACCCAGTTG +
Preference number: 1 (lower is better)
Translates to: WLPSLVRSSPHLPSP*PPSRLCRTPSVTQL
Trigger: CAACTGGGTCACTGATGGAGTTCGGCAGAGACGGCTTGGGGGCCACGGGCTGGGCAGATGGGGAGAGCTCCTCACAAGGCTGGGCAGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp CTCTTCCCGACGCACAGCCACTTGGATGGGCTCCCCTCGCCCAGGTaGCTCCCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGGACGG +
Preference number: 1 (lower is better)
Translates to: LFPTHSHLDGLPSPR*LPCPASKGTDERGR
Trigger: CCGTCCTCTCTCGTCAGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAAGTGGCTGTGCGTCGGGAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 90 bp AAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTaGAAGGCCCAGGCACACCTGTGTCGGGGTGAGGACAGCAAGGAT +
Preference number: 1 (lower is better)
Translates to: KASPALPRSHGVTLL*KAQAHLCRGEDSKD
Trigger: ATCCTTGCTGTCCTCACCCCGACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 90 bp GAGGTAGTCCCACCCCTTCTCACCTGCACCAGGCATTTGTCCAGATaGCCCACCGCCTCTCCCAAGGCCCTCCAAGGGTCTCGGCCATCC +
Preference number: 1 (lower is better)
Translates to: EVVPPLLTCTRHLSR*PTASPKALQGSRPS
Trigger: GGATGGCCGAGACCCTTGGAGGGCCTTGGGAGAGGCGGTGGGGCATCTGGACAAATGCCTGGTGCAGGTGAGAAGGGGTGGGACTACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR TCA 90 bp TGGCGTCACCTTGTTGTGCAAGGCCCAGGCACACCTGTGTCGGGGTaGGGACAGCAAGGATGCCAGCGGCAGTACCAGCCAGGCTTGGGA +
Preference number: 1 (lower is better)
Translates to: WRHLVVQGPGTPVSG*GQQGCQRQYQPGLG
Trigger: TCCCAAGCCTGGCTGGTACTGCCGCTGGCATCCTTGCTGTCCTCACCCCGACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 90 bp AGCTCACCTCTTCCCTTACAGGGTGGCCTGGCTCACGGTGGAGGCTaGATCAGGAGCTTCAGGCAGAGCAGGGGCTGGAATGGTCCCCAG +
Preference number: 1 (lower is better)
Translates to: SSPLPLQGGLAHGGG*IRSFRQSRGWNGPQ
Trigger: CTGGGGACCATTCCAGCCCCTGCTCTGCCTGAAGCTCCTGATGCAGCCTCCACCGTGAGCCAGGCCACCCTGTAAGGGAAGAGGTGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 90 bp AGGAGCTCTCCCCATCTGCCCAGCCCGTGGCCCCCAAGCCGTCTCTaGCGAACTCCATCAGTGACCCAGTTGGAGAAAGGCCAGCTTGAC +
Preference number: 1 (lower is better)
Translates to: RSSPHLPSPWPPSRL*RTPSVTQLEKGQLD
Trigger: GTCAAGCTGGCCTTTCTCCAACTGGGTCACTGATGGAGTTCGGCAGAGACGGCTTGGGGGCCACGGGCTGGGCAGATGGGGAGAGCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp TGCAACCAGGCAGGCACAGCTCACCTCTTCCCTTACAGGGTGGCCTaGCTCACGGTGGAGGCTGCATCAGGAGCTTCAGGCAGAGCAGGG +
Preference number: 1 (lower is better)
Translates to: CNQAGTAHLFPYRVA*LTVEAASGASGRAG
Trigger: CCCTGCTCTGCCTGAAGCTCCTGATGCAGCCTCCACCGTGAGCCAGGCCACCCTGTAAGGGAAGAGGTGAGCTGTGCCTGCCTGGTTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp GGACACTCACCCCCGGCATCAGTCGGTGTGTCTACACTGGCAGGTTaGCACCTGCTCTGGGAGGGTGCTGCCATGTGGGCTAACGTGAGC +
Preference number: 1 (lower is better)
Translates to: GHSPPASVGVSTLAG*HLLWEGAAMWANVS
Trigger: GCTCACGTTAGCCCACATGGCAGCACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGACTGATGCCGGGGGTGAGTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR TCA 90 bp TGCCCAGCCCGTGGCCCCCAAGCCGTCTCTGCCGAACTCCATCAGTaGCCCAGTTGGAGAAAGGCCAGCTTGACAAATGCTCTCTGCGGG +
Preference number: 1 (lower is better)
Translates to: CPARGPQAVSAELHQ*PSWRKASLTNALCG
Trigger: CCCGCAGAGAGCATTTGTCAAGCTGGCCTTTCTCCAACTGGGTCACTGATGGAGTTCGGCAGAGACGGCTTGGGGGCCACGGGCTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp GAGGGGACTTCAAGCTCCAGAATGAAGGCGCAGGAGGTAAGGAGATaGGCAGAGGGTGTCTGGAGGAGGGACCAGCCTGGGCAAAGGCAG +
Preference number: 1 (lower is better)
Translates to: EGTSSSRMKAQEVRR*AEGVWRRDQPGQRQ
Trigger: CTGCCTTTGCCCAGGCTGGTCCCTCCTCCAGACACCCTCTGCCCATCTCCTTACCTCCTGCGCCTTCATTCTGGAGCTTGAAGTCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp TCTACACTGGCAGGTTGGCACCTGCTCTGGGAGGGTGCTGCCATGTaGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCA +
Preference number: 1 (lower is better)
Translates to: STLAGWHLLWEGAAM*ANVSHLQLSQPGAA
Trigger: TGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACATGGCAGCACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp ACACTACAGGACACTCACCCCCGGCATCAGTCGGTGTGTCTACACTaGCAGGTTGGCACCTGCTCTGGGAGGGTGCTGCCATGTGGGCTA +
Preference number: 1 (lower is better)
Translates to: TLQDTHPRHQSVCLH*QVGTCSGRVLPCGL
Trigger: TAGCCCACATGGCAGCACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGACTGATGCCGGGGGTGAGTGTCCTGTAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp CCTGGCCACCACTCCTTAATTCTAAGTTCTGGTCTAGCCCAGTCCTaGGCAGACTCTTCCCGACGCACAGCCACTTGGATGGGCTCCCCT +
Preference number: 1 (lower is better)
Translates to: PGHHSLILSSGLAQS*ADSSRRTATWMGSP
Trigger: AGGGGAGCCCATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACCAGAACTTAGAATTAAGGAGTGGTGGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR TCA 90 bp GTGATGGAGAGGAGATGTTCCCCAGAGATAGCCCTGGGATCCAGGTaGTTCGAGATGGGCTATAGGAACCAAGGCCTCCCCCAGCGTGAA +
Preference number: 1 (lower is better)
Translates to: VMERRCSPEIALGSR*FEMGYRNQGLPQRE
Trigger: TTCACGCTGGGGGAGGCCTTGGTTCCTATAGCCCATCTCGAATCACCTGGATCCCAGGGCTATCTCTGGGGAACATCTCCTCTCCATCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp AAAGGCCAGCTTGACAAATGCTCTCTGCGGGACAAGCAGGATGAGTaGGCGTTTCTACACTACAGGACACTCACCCCCGGCATCAGTCGG +
Preference number: 1 (lower is better)
Translates to: KGQLDKCSLRDKQDE*AFLHYRTLTPGISR
Trigger: CCGACTGATGCCGGGGGTGAGTGTCCTGTAGTGTAGAAACGCCCACTCATCCTGCTTGTCCCGCAGAGAGCATTTGTCAAGCTGGCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 90 bp AAGGGGAACTTCCTAGCATACACGAGAAATCTGGTTACCTCCAGCTaGGGAAGGGCGGTCCTGGAGGGCCCTCAGCTGAGGAGTCTGATT +
Preference number: 1 (lower is better)
Translates to: KGNFLAYTRNLVTSS*GRAVLEGPQLRSLI
Trigger: AATCAGACTCCTCAGCTGAGGGCCCTCCAGGACCGCCCTTCCCCAGCTGGAGGTAACCAGATTTCTCGTGTATGCTAGGAAGTTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 90 bp CTGTACAGACCTGGTGAGGGGATGTCAGAGACTTTATTGCCGTCCTaGCCAACAAAGGCCTTCAGGCTTTACATGAGAGCAGGCTGGGAA +
Preference number: 1 (lower is better)
Translates to: LYRPGEGMSETLLPS*PTKAFRLYMRAGWE
Trigger: TTCCCAGCCTGCTCTCATGTAAAGCCTGAAGGCCTTTGTTGGGCAGGACGGCAATAAAGTCTCTGACATCCCCTCACCAGGTCTGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 90 bp CGAACTCCATCAGTGACCCAGTTGGAGAAAGGCCAGCTTGACAAATaGTCTCTGCGGGACAAGCAGGATGAGTGGGCGTTTCTACACTAC +
Preference number: 1 (lower is better)
Translates to: RTPSVTQLEKGQLDK*SLRDKQDEWAFLHY
Trigger: GTAGTGTAGAAACGCCCACTCATCCTGCTTGTCCCGCAGAGAGCATTTGTCAAGCTGGCCTTTCTCCAACTGGGTCACTGATGGAGTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 90 bp GAACTGACGAGAGAGGACGGGGAGAAGGTGACAAGTACAAGCACCTaGAGTTCCCACCAGCAGCAGGAAATATTGAGGTGTGACCAGAAG +
Preference number: 1 (lower is better)
Translates to: ELTREDGEKVTSTST*SSHQQQEILRCDQK
Trigger: CTTCTGGTCACACCTCAATATTTCCTGCTGCTGGTGGGAACTGCAGGTGCTTGTACTTGTCACCTTCTCCCCGTCCTCTCTCGTCAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR TCA 90 bp TACAAGCACCTGCAGTTCCCACCAGCAGCAGGAAATATTGAGGTGTaGCCAGAAGGGGAACTTCCTAGCATACACGAGAAATCTGGTTAC +
Preference number: 1 (lower is better)
Translates to: YKHLQFPPAAGNIEV*PEGELPSIHEKSGY
Trigger: GTAACCAGATTTCTCGTGTATGCTAGGAAGTTCCCCTTCTGGTCACACCTCAATATTTCCTGCTGCTGGTGGGAACTGCAGGTGCTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp GCCCCACCGCCTCTCCCAAGGCCCTCCAAGGGTCTCGGCCATCCGGGGACAGCAGAAGGATGGGCCAAGTaGCCCCCGCAGAGACCCCAC +
Preference number: 2 (lower is better)
Translates to: APPPLPRPSKGLGHPGTAEGWAK*PPQRPH
Trigger: GTGGGGTCTCTGCGGGGGTCACTTGGCCCATCCTTC...TGCTGTCCCCGGATGGCCGAGACCCTTGGAGGGCCTTGGGAGAGGCGGTGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 90 bp TGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCAGAGGCCTaGGGGCCAGGTCACTGCCCAGCTCAGAGCCCAGGGAGCCCCGAG +
Preference number: 2 (lower is better)
Translates to: CLSRLFPLHAREPEA*GPGHCPAQSPGSPE
Trigger: CTCGGGGCTCCCTGGGCTCTGAGCTGGGCAGTGACCTGGCCCCAAGGCCTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 90 bp GGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTaGTTGTGCAAGGCCCAGGCACACCTGTGTCGGGGTGAGGACAGC +
Preference number: 2 (lower is better)
Translates to: GAKASPALPRSHGVT*LCKAQAHLCRGEDS
Trigger: GCTGTCCTCACCCCGACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 90 bp TGGTCTAGCCCAGTCCTGGGCAGACTCTTCCCGACGCACAGCCACTaGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCC +
Preference number: 2 (lower is better)
Translates to: WSSPVLGRLFPTHSH*DGLPSPRWLPCPAS
Trigger: GGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp CACGAGGCTGCCCTTGGCCTTGGAGCACCACCCCCACCGGGCAGCAGCAGGGCCCCTTCAGGCTTTACATaGGAGCAGGCTGGGAAGCAG +
Preference number: 2 (lower is better)
Translates to: HEAALGLGAPPPPGSSRAPSGFT*EQAGKQ
Trigger: CTGCTTCCCAGCCTGCTCTCATGTAAAGCCTGAAGG...GGCCCTGCTGCTGCCCGGTGGGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp ACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCAGAGCATCTGCCCAGCCCGTaGCCCCCAAGCCGTCTCTGC +
Preference number: 2 (lower is better)
Translates to: TLQACLSRLFPLHAREPEHLPSP*PPSRLC
Trigger: GCAGAGACGGCTTGGGGGCCACGGGCTGGGCAGATG...CTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCGGGAGCCCCGAGCAGTaGCCCTGCACCTCCTGCCAC +
Preference number: 2 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVGSPEQ*PCTSCH
Trigger: GTGGCAGGAGGTGCAGGGCCACTGCTCGGGGCTCCC...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 90 bp GCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTaGTGCAAGGCCCAGGCACACCTGTGTCGGGGTGAGGACAGCAAG +
Preference number: 2 (lower is better)
Translates to: AKASPALPRSHGVTL*CKAQAHLCRGEDSK
Trigger: CTTGCTGTCCTCACCCCGACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp TCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGGCTTGGGAACCAGGCTaGGGAGCCTGGGGTATGCCC +
Preference number: 2 (lower is better)
Translates to: SPRPGGSRVQHPRELTREAWEPG*GAWGMP
Trigger: GGGCATACCCCAGGCTCCTCAGCCTGGTTCCCAAGC...CTCTCTCGTCAGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp TTGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTTGGGCCTCACCAGGGTaGGGAGCAAAGGCTTCCCCG +
Preference number: 2 (lower is better)
Translates to: LDGLPSPRWLPCPASKGTWASPG*GAKASP
Trigger: CGGGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCA...AGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp GAAGCAGGTGGGCACTGCCGTGTGCAGGAGCAACCGGGGAGACCAGGTGGGCTCTCCCAGGCCAGTGCATaGACACATGATGGGGGCCAG +
Preference number: 2 (lower is better)
Translates to: EAGGHCRVQEQPGRPGGLSQASA*THDGGQ
Trigger: CTGGCCCCCATCATGTGTGCATGCACTGGCCTGGGA...GAGCCCACCTGGTCTCCCCGGTTGCTCCTGCACACGGCAGTGCCCACCTGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp ACGAACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCGAGGAGCCTGGGGTATaGCCAGGTGCCAAGGGCCAG +
Preference number: 2 (lower is better)
Translates to: TNAPSLSVPAVPTARQRAEEPGV*PGAKGQ
Trigger: CTGGCCCTTGGCACCTGGGCATACCCCAGGCTCCTC...GGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGTTCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCAGGCTTCCCCGGCCCTaGCACGCTCGCATGGCGTCA +
Preference number: 2 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVRLPRP*HARMAS
Trigger: TGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCT...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp GAAGCAGGTGGGCACTGCCGTGTGCAGGAGCAACCGGGGAGACCAGGTGGGCTCTGGCCTGGCTCACGGTaGAGGCTGCATCAGGAGCTT +
Preference number: 2 (lower is better)
Translates to: EAGGHCRVQEQPGRPGGLWPGSR*RLHQEL
Trigger: AAGCTCCTGATGCAGCCTCCACCGTGAGCCAGGCCA...GAGCCCACCTGGTCTCCCCGGTTGCTCCTGCACACGGCAGTGCCCACCTGCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp GCCCAGGCACACCTGTGTCGGGGTGAGGACAGCAAGGATGCCAGCGGCAGTACCCCTTACAGGGTGGCCTaGCTCACGGTGGAGGCTGCA +
Preference number: 2 (lower is better)
Translates to: AQAHLCRGEDSKDASGSTPYRVA*LTVEAA
Trigger: TGCAGCCTCCACCGTGAGCCAGGCCACCCTGTAAGG...GGTACTGCCGCTGGCATCCTTGCTGTCCTCACCCCGACACAGGTGTGCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCGCACGAGGCTGCCCTTaGCCTTGGAGCACCACCCCC +
Preference number: 2 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVARGCP*PWSTTP
Trigger: GGGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTGC...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 90 bp GGGATGCCGGAGGTAGTCCCACCCCTTCTCACCTGCACCAGGCATTaGTCCAGATGCCCCACCGCCTCTCCCAAGGCCCTCCAAGGGTCT +
Preference number: 2 (lower is better)
Translates to: GMPEVVPPLLTCTRH*SRCPTASPKALQGS
Trigger: AGACCCTTGGAGGGCCTTGGGAGAGGCGGTGGGGCATCTGGACAAATGCCTGGTGCAGGTGAGAAGGGGTGGGACTACCTCCGGCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp TTGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTCAGTGGGGTCATGCCTaGGACCCCTCCAGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: LDGLPSPRWLPCPASKGTQWGHA*DPSSRS
Trigger: TGACCTGCTGGAGGGGTCTCAGGCATGACCCCACTG...AGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp CACGAGGCTGCCCTTGGCCTTGGAGCACCACCCCCACCGGGCAGCAGCAGGGCCACTTTATTGCCGTCCTaGCCAACAAAGGCCTTCAGG +
Preference number: 2 (lower is better)
Translates to: HEAALGLGAPPPPGSSRATLLPS*PTKAFR
Trigger: CCTGAAGGCCTTTGTTGGGCAGGACGGCAATAAAGT...GGCCCTGCTGCTGCCCGGTGGGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp TTGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTTGGGCAAAGGCAGGGTaGCAGGAAGGGGGAGTGGCA +
Preference number: 2 (lower is better)
Translates to: LDGLPSPRWLPCPASKGTWAKAG*QEGGVA
Trigger: TGCCACTCCCCCTTCCTGCCACCCTGCCTTTGCCCA...AGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp CGGCATCAGTCGGTGTGTCTACACTGGCAGGTTGGCACCTGCTCTGGGAGGGTGTGGGCAGAGGGTGTCTaGAGGAGGGACCAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: RHQSVCLHWQVGTCSGRVWAEGV*RRDQPG
Trigger: CCCAGGCTGGTCCCTCCTCCAGACACCCTCTGCCCA...CACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGACTGATGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp TCTGGTCTAGCCCAGTCCTGGGCAGACTCTTCCCGACGCACAGCCACTTGGATGGGGTCCCACGGGCACTaGGCACCTGGCTGTGCCTCA +
Preference number: 2 (lower is better)
Translates to: SGLAQSWADSSRRTATWMGSHGH*APGCAS
Trigger: TGAGGCACAGCCAGGTGCCCAGTGCCCGTGGGACCC...CATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp AGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGTGGGGAGGCGGGTCCGATTTCAGCCCCAGCTaGAAGAAGGCACGAGGCTGC +
Preference number: 2 (lower is better)
Translates to: SVKLPGVSGATPLWGGGSDFSPS*KKARGC
Trigger: GCAGCCTCGTGCCTTCTTTCAGCTGGGGCTGAAATC...GGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp TCTGGTCTAGCCCAGTCCTGGGCAGACTCTTCCCGACGCACAGCCACTTGGATGGCTCACACGCACAGCTaGCCCCGGAAGGATGGGCCA +
Preference number: 2 (lower is better)
Translates to: SGLAQSWADSSRRTATWMAHTHS*PRKDGP
Trigger: TGGCCCATCCTTCCGGGGGCAGCTGTGCGTGTGAGC...CATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp CGGCATCAGTCGGTGTGTCTACACTGGCAGGTTGGCACCTGCTCTGGGAGGGTGCACCTGCCCAGGCTGTaGAACCAGGCAGGCACAGCT +
Preference number: 2 (lower is better)
Translates to: RHQSVCLHWQVGTCSGRVHLPRL*NQAGTA
Trigger: AGCTGTGCCTGCCTGGTTGCACAGCCTGGGCAGGTG...CACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGACTGATGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCTACATGAGAGCAGGCTaGGAAGCAGCCCCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPYMRAG*EAAPAV
Trigger: CACTGCTGGGGCTGCTTCCCAGCCTGCTCTCATGTA...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp TCTGGTCTAGCCCAGTCCTGGGCAGACTCTTCCCGACGCACAGCCACTTGGATGGCTTCCGCAGCCCTATaGAGCCCTGGTGTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: SGLAQSWADSSRRTATWMASAAL*SPGVAL
Trigger: CAGGGCCACACCAGGGCTCCATAGGGCTGCGGAAGC...CATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp AGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTGATGCTTTTGCCCTCCTaGGGCTCCAGTCCAGAGGCC +
Preference number: 2 (lower is better)
Translates to: RSKGFPGPATLAWRHLVVMLLPS*GSSPEA
Trigger: GGCCTCTGGACTGGAGCCCCAGGAGGGCAAAAGCAT...CACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp ACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCAGAGGCCAAGGGCCAGCTCTaGGGTCATGCTTTTGCCCTC +
Preference number: 2 (lower is better)
Translates to: TLQACLSRLFPLHAREPEAKGQL*GHAFAL
Trigger: GAGGGCAAAAGCATGACCCCAGAGCTGGCCCTTGGC...CTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp TCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGCTGACAATGGGGGTCTaGCTGCCCAGCCTTGTGAGG +
Preference number: 2 (lower is better)
Translates to: SPRPGGSRVQHPRELTRELTMGV*LPSLVR
Trigger: CCTCACAAGGCTGGGCAGCCAGACCCCCATTGTCAG...CTCTCTCGTCAGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp CCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGGACGGGGAGAAGGTGACAAGCTGAGTGGGGTGGCGTaGGCAACAGGCTCTGCCCAG +
Preference number: 2 (lower is better)
Translates to: PCPASKGTDERGRGEGDKLSGVA*ATGSAQ
Trigger: CTGGGCAGAGCCTGTTGCTCACGCCACCCCACTCAG...CTTGTCACCTTCTCCCCGTCCTCTCTCGTCAGTTCCCTTGGATGCTGGACACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp CCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGGACGGGGAGAAGGTGACAAGCCATGCACCCCACCCTaGCCAGCTCACACGCACAGC +
Preference number: 2 (lower is better)
Translates to: PCPASKGTDERGRGEGDKPCTPP*PAHTHS
Trigger: GCTGTGCGTGTGAGCTGGGCAGGGTGGGGTGCATGG...CTTGTCACCTTCTCCCCGTCCTCTCTCGTCAGTTCCCTTGGATGCTGGACACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp TCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGAAAGGAACCGTCACCTaGGCAGGTAGAGAGGCCTGG +
Preference number: 2 (lower is better)
Translates to: SPRPGGSRVQHPRELTREKGTVT*AGREAW
Trigger: CCAGGCCTCTCTACCTGCCCAGGTGACGGTTCCTTT...CTCTCTCGTCAGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp AGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGTGGGGAGGCGGGTCCGCAGCGATACTGGGGTaGCAGAAAACCAGACAGCAA +
Preference number: 2 (lower is better)
Translates to: SVKLPGVSGATPLWGGGSAAILG*QKTRQQ
Trigger: TTGCTGTCTGGTTTTCTGTCACCCCAGTATCGCTGC...GGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCCTCACCACCAGAGTGTaGAGCCCCCTTGACACTCAC +
Preference number: 2 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVLTTRV*SPLDTH
Trigger: GTGAGTGTCAAGGGGGCTTCACACTCTGGTGGTGAG...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCGCCGAACTCCATCAGTaGCCCAGTTGGAGAAAGGCC +
Preference number: 2 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVAELHQ*PSWRKA
Trigger: GGCCTTTCTCCAACTGGGTCACTGATGGAGTTCGGC...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp CCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGGACGGGGAGAAGGTGACAAGGGGTTTGGAGGGGACTaGCAATGGGGGTCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: PCPASKGTDERGRGEGDKGFGGD*QWGSGC
Trigger: GCAGCCAGACCCCCATTGTCAGTCCCCTCCAAACCC...CTTGTCACCTTCTCCCCGTCCTCTCTCGTCAGTTCCCTTGGATGCTGGACACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp CGGCATCAGTCGGTGTGTCTACACTGGCAGGTTGGCACCTGCTCTGGGAGGGTGAGGCATTTGTCCAGATaGCCCACCGCCTCTCCCAAG +
Preference number: 2 (lower is better)
Translates to: RHQSVCLHWQVGTCSGRVRHLSR*PTASPK
Trigger: CTTGGGAGAGGCGGTGGGGCATCTGGACAAATGCCT...CACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGACTGATGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp GACAAGCAGGATGAGTGGGCGTTTCTACACTACAGGACACTCACCCCCGGCATCGTGGGCACTGCCGTGTaGAGGAGCAACCGGGGAGAC +
Preference number: 2 (lower is better)
Translates to: DKQDEWAFLHYRTLTPGIVGTAV*RSNRGD
Trigger: GTCTCCCCGGTTGCTCCTGCACACGGCAGTGCCCAC...GATGCCGGGGGTGAGTGTCCTGTAGTGTAGAAACGCCCACTCATCCTGCTTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp GAAGCAGGTGGGCACTGCCGTGTGCAGGAGCAACCGGGGAGACCAGGTGGGCTCCATGGGAGGAAGGAATaGCTTATACTGCAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: EAGGHCRVQEQPGRPGGLHGRKE*LILQQD
Trigger: GTCCTGCTGCAGTATAAGCCATTCCTTCCTCCCATG...GAGCCCACCTGGTCTCCCCGGTTGCTCCTGCACACGGCAGTGCCCACCTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCTGGGAAAGGACCACTTaGCCAAGTCACGTCCATGCA +
Preference number: 2 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPWERTT*PSHVHA
Trigger: TGCATGGACGTGACTTGGCCAAGTGGTCCTTTCCCA...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp AACCAAGGCCTCCCCCAGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTTCTACACTGGCAGGTTaGCACCTGCTCTGGGAGGGT +
Preference number: 2 (lower is better)
Translates to: NQGLPQREITRCERRHPTSTLAG*HLLWEG
Trigger: ACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGA...AGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCTGGGGGAGGCCTTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp ACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCAGAGTCGGTGTGTCTACACTaGCAGGTTGGCACCTGCTCT +
Preference number: 2 (lower is better)
Translates to: TLQACLSRLFPLHAREPESVCLH*QVGTCS
Trigger: AGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGA...CTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp AGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGTGGGGAGGCGGGTCCACCTCCTGCCACTTCTaGGTGATTCTAGAGGAGTCC +
Preference number: 2 (lower is better)
Translates to: SVKLPGVSGATPLWGGGSTSCHF*VILEES
Trigger: GGACTCCTCTAGAATCACCCAGAAGTGGCAGGAGGT...GGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 90 bp CCGTGGCCCCCAAGCCGTCTCTGCCGAACTCCATCAGTGACCCAGTaGGAGAAAGGCCAGCTTGACAAATGCTCTCTGCGGGACAAGCAG +
Preference number: 2 (lower is better)
Translates to: PWPPSRLCRTPSVTQ*EKGQLDKCSLRDKQ
Trigger: CTGCTTGTCCCGCAGAGAGCATTTGTCAAGCTGGCCTTTCTCCAACTGGGTCACTGATGGAGTTCGGCAGAGACGGCTTGGGGGCCACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp GACAAGCAGGATGAGTGGGCGTTTCTACACTACAGGACACTCACCCCCGGCATCCAGTGCATGCACACATaGTGGGGGCCAGGGGTCCAC +
Preference number: 2 (lower is better)
Translates to: DKQDEWAFLHYRTLTPGIQCMHT*WGPGVH
Trigger: GTGGACCCCTGGCCCCCATCATGTGTGCATGCACTG...GATGCCGGGGGTGAGTGTCCTGTAGTGTAGAAACGCCCACTCATCCTGCTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp CCAAGGGAACTGACGAGAGAGGACGGGGAGAAGGTGACAAGTACAAGCACCTGCGTGAGCAACAGGCTCTaGCCAGCCCCTCAGGAGCTG +
Preference number: 2 (lower is better)
Translates to: PRELTREDGEKVTSTSTCVSNRL*PAPQEL
Trigger: CAGCTCCTGAGGGGCTGGGCAGAGCCTGTTGCTCAC...GCAGGTGCTTGTACTTGTCACCTTCTCCCCGTCCTCTCTCGTCAGTTCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp TTCGCCATGTTGGCTGTTCTCAAACTCCTAGGCTCAAGCTATCCACCCGCCTCGCCCGAGCAGTGGCCCTaGACCTCCTGCCACTTCTGG +
Preference number: 2 (lower is better)
Translates to: FAMLAVLKLLGSSYPPASPEQWP*TSCHFW
Trigger: CCAGAAGTGGCAGGAGGTGCAGGGCCACTGCTCGGG...CGAGGCGGGTGGATAGCTTGAGCCTAGGAGTTTGAGAACAGCCAACATGGCGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp ATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCACTGAGTACACCTGTGTCGGGGTaGGGACAGCAAGGATGCCAG +
Preference number: 2 (lower is better)
Translates to: MWANVSHLQLSQPGAALSTPVSG*GQQGCQ
Trigger: CTGGCATCCTTGCTGTCCTCACCCCGACACAGGTGT...ACTCAGTGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp GACAAGCAGGATGAGTGGGCGTTTCTACACTACAGGACACTCACCCCCGGCATCTCTTCCCTTACAGGGTaGCCTGGCTCACGGTGGAGG +
Preference number: 2 (lower is better)
Translates to: DKQDEWAFLHYRTLTPGISSLTG*PGSRWR
Trigger: CCTCCACCGTGAGCCAGGCCACCCTGTAAGGGAAGA...GATGCCGGGGGTGAGTGTCCTGTAGTGTAGAAACGCCCACTCATCCTGCTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp TTCGCCATGTTGGCTGTTCTCAAACTCCTAGGCTCAAGCTATCCACCCGCCTCGGCTCACGGTGGAGGCTaGATCAGGAGCTTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: FAMLAVLKLLGSSYPPASAHGGG*IRSFRQ
Trigger: CTGCCTGAAGCTCCTGATGCAGCCTCCACCGTGAGC...CGAGGCGGGTGGATAGCTTGAGCCTAGGAGTTTGAGAACAGCCAACATGGCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp GCTGCCATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCACCCTCCAGCAGGTCATaGGAGGAAGGAATGGCTTAT +
Preference number: 2 (lower is better)
Translates to: AAMWANVSHLQLSQPGAAPSSRS*EEGMAY
Trigger: ATAAGCCATTCCTTCCTCCCATGACCTGCTGGAGGG...TGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACATGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CCA 90 bp ATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCACTGAGTCCTGCCACGCTCGCATaGCGTCACCTTGTTGTGCAA +
Preference number: 2 (lower is better)
Translates to: MWANVSHLQLSQPGAALSPATLA*RHLVVQ
Trigger: TTGCACAACAAGGTGACGCCATGCGAGCGTGGCAGG...ACTCAGTGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp CCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGGACGGGGAGAAGGTGACAAGGCTGTACAGACCTGGTaGGGGGATGTCAGAGACTTT +
Preference number: 2 (lower is better)
Translates to: PCPASKGTDERGRGEGDKAVQTW*GDVRDF
Trigger: AAAGTCTCTGACATCCCCTCACCAGGTCTGTACAGC...CTTGTCACCTTCTCCCCGTCCTCTCTCGTCAGTTCCCTTGGATGCTGGACACGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR TCA 90 bp TTCGCCATGTTGGCTGTTCTCAAACTCCTAGGCTCAAGCTATCCACCCGCCTCGAGTGTGAAGCCCCCTTaGCACTCACAGGCTTCCGCA +
Preference number: 2 (lower is better)
Translates to: FAMLAVLKLLGSSYPPASSVKPP*HSQASA
Trigger: TGCGGAAGCCTGTGAGTGTCAAGGGGGCTTCACACT...CGAGGCGGGTGGATAGCTTGAGCCTAGGAGTTTGAGAACAGCCAACATGGCGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp TTCGCCATGTTGGCTGTTCTCAAACTCCTAGGCTCAAGCTATCCACCCGCCTCGGACGGGGCCACTCTGTaGCTTAGCTTCCTCAGCCAT +
Preference number: 2 (lower is better)
Translates to: FAMLAVLKLLGSSYPPASDGATL*LSFLSH
Trigger: ATGGCTGAGGAAGCTAAGGCACAGAGTGGCCCCGTC...CGAGGCGGGTGGATAGCTTGAGCCTAGGAGTTTGAGAACAGCCAACATGGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR GCA 90 bp GCTGCCATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCATGTCAGAGACTTTATTaGCGTCCTGCCCAACAAAGG +
Preference number: 2 (lower is better)
Translates to: AAMWANVSHLQLSQPGAACQRLY*RPAQQR
Trigger: CCTTTGTTGGGCAGGACGGCAATAAAGTCTCTGACA...TGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACATGGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 90 bp AGAGCCAGGCTGTACAGACCTGGTGAGGGGATGTCAGAGACTTTATaGCCGTCCTGCCCAACAAAGGCCTTCAGGCTTTACATGAGAGCA +
Preference number: 2 (lower is better)
Translates to: RARLYRPGEGMSETL*PSCPTKAFRLYMRA
Trigger: TGCTCTCATGTAAAGCCTGAAGGCCTTTGTTGGGCAGGACGGCAATAAAGTCTCTGACATCCCCTCACCAGGTCTGTACAGCCTGGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 90 bp GTGACAAGTACAAGCACCTGCAGTTCCCACCAGCAGCAGGAAATATaGAGGTGTGACCAGAAGGGGAACTTCCTAGCATACACGAGAAAT +
Preference number: 2 (lower is better)
Translates to: VTSTSTCSSHQQQEI*RCDQKGNFLAYTRN
Trigger: ATTTCTCGTGTATGCTAGGAAGTTCCCCTTCTGGTCACACCTCAATATTTCCTGCTGCTGGTGGGAACTGCAGGTGCTTGTACTTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp GCCACCCCACTGTGGGGAGGCGGGTCCCACGGGCACTaGGCACCTGGCTGTGCCTCATTCCTGAGTCTCCCA +
Preference number: 3 (lower is better)
Translates to: ATPLWGGGSHGH*APGCASFLSLP
Trigger: TGGGAGACTCAGGAATGAGGCACAGCCAGGTGCCCAGTGCCCGTGGGACCCGCCTCCCCACAGTGGGGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp GTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGTaGGGAGGCGGGTCCCACGGGCACTGGGCACCTGGC +
Preference number: 3 (lower is better)
Translates to: VKLPGVSGATPL*GGGSHGHWAPG
Trigger: GCCAGGTGCCCAGTGCCCGTGGGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCACACCTGGTAATTTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp CCTGGGCAGACTCTTCCCGACGCACAGCCACTTGGATaGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGC +
Preference number: 3 (lower is better)
Translates to: PGQTLPDAQPLG*APLAQVAPVSS
Trigger: GCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CAA 90 bp TTGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTAGGCTGCCCTTGGCCTaGGAGCACCACCCCCACCGG +
Preference number: 3 (lower is better)
Translates to: LDGLPSPRWLPCPASKGTRLPLA*EHHPHR
Trigger: CCGGTGGGGGTGGTGCTCCAAGGCCAAGGGCAGCCT...AGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 72 bp CCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTaGAAGGCCCAGGCACACCTGTGTCGGGGTGAGGAC +
Preference number: 3 (lower is better)
Translates to: PALPRSHGVTLL*KAQAHLCRGED
Trigger: GTCCTCACCCCGACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp GGCTGTTCCCACTGCACGCCAGAGAGCCAGAGGCCTTaGGGCCAGGTCACTGCCCAGCTCAGAGCCCAGGGA +
Preference number: 3 (lower is better)
Translates to: GCSHCTPESQRP*GQVTAQLRAQG
Trigger: TCCCTGGGCTCTGAGCTGGGCAGTGACCTGGCCCCAAGGCCTCTGGCTCTCTGGCGTGCAGTGGGAACAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp CAGTCCTGGGCAGACTCTTCCCGACGCACAGCCACTTaGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTC +
Preference number: 3 (lower is better)
Translates to: QSWADSSRRTAT*MGSPRPGGSRV
Trigger: GACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CAA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCATGCTCATCCAGGGGTaGGAGGGCTGCCTGGGGGAG +
Preference number: 3 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPMLIQG*EGCLGE
Trigger: CTCCCCCAGGCAGCCCTCCAACCCCTGGATGAGCAT...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CAA 90 bp AACCAAGGCCTCCCCCAGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGGCACGAGGCTGCCCTaGGCCTTGGAGCACCACCCC +
Preference number: 3 (lower is better)
Translates to: NQGLPQREITRCERRHPTGTRLP*ALEHHP
Trigger: GGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTGCC...AGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCTGGGGGAGGCCTTGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CAA 90 bp GAAGCAGGTGGGCACTGCCGTGTGCAGGAGCAACCGGGGAGACCAGGTGGGCTCACCTGCACCAGGCATTaGTCCAGATGCCCCACCGCC +
Preference number: 3 (lower is better)
Translates to: EAGGHCRVQEQPGRPGGLTCTRH*SRCPTA
Trigger: GGCGGTGGGGCATCTGGACAAATGCCTGGTGCAGGT...GAGCCCACCTGGTCTCCCCGGTTGCTCCTGCACACGGCAGTGCCCACCTGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 72 bp GAACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTaGACGCCAGAGAGCCAGAGGCCTTGGGGCCAGGTC +
Preference number: 3 (lower is better)
Translates to: ERSKPVCPGCSH*TPESQRPWGQV
Trigger: GACCTGGCCCCAAGGCCTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 72 bp CCTCACCAGGGTGAGGAGCAAAGGCTTCCCCGGCCCTaGCACGCTCGCATGGCGTCACCTTGTTGTGCAAGG +
Preference number: 3 (lower is better)
Translates to: PHQGEEQRLPRP*HARMASPCCAR
Trigger: CCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCTCACCCTGGTGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 72 bp CCCCATCTGCCCAGCCCGTGGCCCCCAAGCCGTCTCTaGCGAACTCCATCAGTGACCCAGTTGGAGAAAGGC +
Preference number: 3 (lower is better)
Translates to: PHLPSPWPPSRL*RTPSVTQLEKG
Trigger: GCCTTTCTCCAACTGGGTCACTGATGGAGTTCGGCAGAGACGGCTTGGGGGCCACGGGCTGGGCAGATGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp AGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATaGCGTCACCTTGTTGTGCAAGGCCCAGGCACACCT +
Preference number: 3 (lower is better)
Translates to: RSKGFPGPATLA*RHLVVQGPGTP
Trigger: AGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp CCACCTGCAGCTTTCACAACCCGGAGCAGCACTGAGTaGGGTGGCGTGAGCAACAGGCTCTGCCCAGCCCCT +
Preference number: 3 (lower is better)
Translates to: PPAAFTTRSSTE*GGVSNRLCPAP
Trigger: AGGGGCTGGGCAGAGCCTGTTGCTCACGCCACCCCACTCAGTGCTGCTCCGGGTTGTGAAAGCTGCAGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp CCCCCGGCATCAGTCGGTGTGTCTACACTGGCAGGTTaGCACCTGCTCTGGGAGGGTGCTGCCATGTGGGCT +
Preference number: 3 (lower is better)
Translates to: PPASVGVSTLAG*HLLWEGAAMWA
Trigger: AGCCCACATGGCAGCACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGACTGATGCCGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp GCTCCCTGTGGTAGGGCCCTACATCCCACGAGGGTTTaGAGGGGACTGACAATGGGGGTCTGGCTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: APCGRALHPTRV*RGLTMGVWLPS
Trigger: GCTGGGCAGCCAGACCCCCATTGTCAGTCCCCTCCAAACCCTCGTGGGATGTAGGGCCCTACCACAGGGAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp AGCCCCGAGCAGTGGCCCTGCACCTCCTGCCACTTCTaGGTGATTCTAGAGGAGTCCCCTTACCCAGGGCCC +
Preference number: 3 (lower is better)
Translates to: SPEQWPCTSCHF*VILEESPYPGP
Trigger: GGGCCCTGGGTAAGGGGACTCCTCTAGAATCACCCAGAAGTGGCAGGAGGTGCAGGGCCACTGCTCGGGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp GATAGACGGGGACCCGGTGCCCTCCTACAGGCACAGTaGGGACGAAACACACCAACGCGGCGCAGGACACGA +
Preference number: 3 (lower is better)
Translates to: DRRGPGALLQAQ*GRNTPTRRRTR
Trigger: TCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCCCACTGTGCCTGTAGGAGGGCACCGGGTCCCCGTCTATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp ACGCACAGCCACTTGGATGGGCTCCCCTCGCCCAGGTaGCTCCCGTGTCCAGCATCCAAGGGAACTGACGAG +
Preference number: 3 (lower is better)
Translates to: THSHLDGLPSPR*LPCPASKGTDE
Trigger: CTCGTCAGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAAGTGGCTGTGCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CAA 90 bp AGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGTGGGGAGGCGGGTCCTCGCATGGCGTCACCTaGTTGTGCAAGGCCCAGGCA +
Preference number: 3 (lower is better)
Translates to: SVKLPGVSGATPLWGGGSSHGVT*LCKAQA
Trigger: TGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGA...GGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 72 bp AGCCCAGGGAGCCCCGAGCAGTGGCCCTGCACCTCCTaGCACTTCTGGGTGATTCTAGAGGAGTCCCCTTAC +
Preference number: 3 (lower is better)
Translates to: SPGSPEQWPCTS*HFWVILEESPY
Trigger: GTAAGGGGACTCCTCTAGAATCACCCAGAAGTGGCAGGAGGTGCAGGGCCACTGCTCGGGGCTCCCTGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp GCAGGCACAGCTCACCTCTTCCCTTACAGGGTGGCCTaGCTCACGGTGGAGGCTGCATCAGGAGCTTCAGGC +
Preference number: 3 (lower is better)
Translates to: AGTAHLFPYRVA*LTVEAASGASG
Trigger: GCCTGAAGCTCCTGATGCAGCCTCCACCGTGAGCCAGGCCACCCTGTAAGGGAAGAGGTGAGCTGTGCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp CCAAGGGCCAGCTCTGGGGTCATGCTTTTGCCCTCCTaGGGCTCCAGTCCAGAGGCCAGCCAAACAGAGGGA +
Preference number: 3 (lower is better)
Translates to: PRASSGVMLLPS*GSSPEASQTEG
Trigger: TCCCTCTGTTTGGCTGGCCTCTGGACTGGAGCCCCAGGAGGGCAAAAGCATGACCCCAGAGCTGGCCCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CAA 90 bp TACCAGCCAGGCTTGGGAACCAGGCTGAGGAGCCTGGGGTATGCCCAGGTGCCACTGGGAAAGGACCACTaGGCCAAGTCACGTCCATGC +
Preference number: 3 (lower is better)
Translates to: YQPGLGTRLRSLGYAQVPLGKDH*AKSRPC
Trigger: GCATGGACGTGACTTGGCCAAGTGGTCCTTTCCCAG...TGGCACCTGGGCATACCCCAGGCTCCTCAGCCTGGTTCCCAAGCCTGGCTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CAA 90 bp CGGCATCAGTCGGTGTGTCTACACTGGCAGGTTGGCACCTGCTCTGGGAGGGTGCATGGCGTCACCTTGTaGTGCAAGGCCCAGGCACAC +
Preference number: 3 (lower is better)
Translates to: RHQSVCLHWQVGTCSGRVHGVTL*CKAQAH
Trigger: GTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATG...CACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGACTGATGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CAA 90 bp TTGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTACATCCCACGAGGGTTaGGAGGGGACTGACAATGGG +
Preference number: 3 (lower is better)
Translates to: LDGLPSPRWLPCPASKGTTSHEG*EGTDNG
Trigger: CCCATTGTCAGTCCCCTCCAAACCCTCGTGGGATGT...AGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CAA 90 bp TTCGCCATGTTGGCTGTTCTCAAACTCCTAGGCTCAAGCTATCCACCCGCCTCGCCGACGCACAGCCACTaGGATGGGCTCCCCTCGCCC +
Preference number: 3 (lower is better)
Translates to: FAMLAVLKLLGSSYPPASPTHSH*DGLPSP
Trigger: GGGCGAGGGGAGCCCATCCAAGTGGCTGTGCGTCGG...CGAGGCGGGTGGATAGCTTGAGCCTAGGAGTTTGAGAACAGCCAACATGGCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR TCA 72 bp CTTGTTGTGCAAGGCCCAGGCACACCTGTGTCGGGGTaGGGACAGCAAGGATGCCAGCGGCAGTACCAGCCA +
Preference number: 3 (lower is better)
Translates to: LVVQGPGTPVSG*GQQGCQRQYQP
Trigger: TGGCTGGTACTGCCGCTGGCATCCTTGCTGTCCTCACCCCGACACAGGTGTGCCTGGGCCTTGCACAACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR TCA 72 bp ACCTGCTCTGGGAGGGTGCTGCCATGTGGGCTAACGTaGGCCACCTGCAGCTTTCACAACCCGGAGCAGCAC +
Preference number: 3 (lower is better)
Translates to: TCSGRVLPCGLT*ATCSFHNPEQH
Trigger: GTGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACATGGCAGCACCCTCCCAGAGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp GCAGGTTGGCACCTGCTCTGGGAGGGTGCTGCCATGTaGGCTAACGTGAGCCACCTGCAGCTTTCACAACCC +
Preference number: 3 (lower is better)
Translates to: AGWHLLWEGAAM*ANVSHLQLSQP
Trigger: GGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACATGGCAGCACCCTCCCAGAGCAGGTGCCAACCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp CTCAAGCCTATGACTCTTCACAGCCTCCTGAGACACTaGCCCAGTCCCGGGGCTCCCTGTGGTAGGGCCCTA +
Preference number: 3 (lower is better)
Translates to: LKPMTLHSLLRH*PSPGAPCGRAL
Trigger: TAGGGCCCTACCACAGGGAGCCCCGGGACTGGGCCAGTGTCTCAGGAGGCTGTGAAGAGTCATAGGCTTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CAA 90 bp ACGAACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCTGGAGAAAGGCCAGCTaGACAAATGCTCTCTGCGGG +
Preference number: 3 (lower is better)
Translates to: TNAPSLSVPAVPTARQRAWRKAS*TNALCG
Trigger: CCCGCAGAGAGCATTTGTCAAGCTGGCCTTTCTCCA...GGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGTTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp TCAAGCTCCAGAATGAAGGCGCAGGAGGTAAGGAGATaGGCAGAGGGTGTCTGGAGGAGGGACCAGCCTGGG +
Preference number: 3 (lower is better)
Translates to: SSSRMKAQEVRR*AEGVWRRDQPG
Trigger: CCCAGGCTGGTCCCTCCTCCAGACACCCTCTGCCCATCTCCTTACCTCCTGCGCCTTCATTCTGGAGCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp TTCCTAGCATACACGAGAAATCTGGTTACCTCCAGCTaGGGAAGGGCGGTCCTGGAGGGCCCTCAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: FLAYTRNLVTSS*GRAVLEGPQLR
Trigger: CCTCAGCTGAGGGCCCTCCAGGACCGCCCTTCCCCAGCTGGAGGTAACCAGATTTCTCGTGTATGCTAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR-3UTR CAA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCATGTCAGAGACTTTATaGCCGTCCTGCCCAACAAAG +
Preference number: 3 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPMSETL*PSCPTK
Trigger: CTTTGTTGGGCAGGACGGCAATAAAGTCTCTGACAT...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR TCA 72 bp GACAGAGCCTCTCAGAGCCAGGCTGTACAGACCTGGTaGGGGGATGTCAGAGACTTTATTGCCGTCCTGCCC +
Preference number: 3 (lower is better)
Translates to: DRASQSQAVQTW*GDVRDFIAVLP
Trigger: GGGCAGGACGGCAATAAAGTCTCTGACATCCCCTCACCAGGTCTGTACAGCCTGGCTCTGAGAGGCTCTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR TCA 72 bp CGTGGCCCCCAAGCCGTCTCTGCCGAACTCCATCAGTaGCCCAGTTGGAGAAAGGCCAGCTTGACAAATGCT +
Preference number: 3 (lower is better)
Translates to: RGPQAVSAELHQ*PSWRKASLTNA
Trigger: AGCATTTGTCAAGCTGGCCTTTCTCCAACTGGGTCACTGATGGAGTTCGGCAGAGACGGCTTGGGGGCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp CTTGACAAATGCTCTCTGCGGGACAAGCAGGATGAGTaGGCGTTTCTACACTACAGGACACTCACCCCCGGC +
Preference number: 3 (lower is better)
Translates to: LDKCSLRDKQDE*AFLHYRTLTPG
Trigger: GCCGGGGGTGAGTGTCCTGTAGTGTAGAAACGCCCACTCATCCTGCTTGTCCCGCAGAGAGCATTTGTCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CCA 72 bp CACCAAGCCTGGCCACCACTCCTTAATTCTAAGTTCTaGTCTAGCCCAGTCCTGGGCAGACTCTTCCCGACG +
Preference number: 3 (lower is better)
Translates to: HQAWPPLLNSKF*SSPVLGRLFPT
Trigger: CGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACCAGAACTTAGAATTAAGGAGTGGTGGCCAGGCTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 72 bp TCAGTGACCCAGTTGGAGAAAGGCCAGCTTGACAAATaGTCTCTGCGGGACAAGCAGGATGAGTGGGCGTTT +
Preference number: 3 (lower is better)
Translates to: SVTQLEKGQLDK*SLRDKQDEWAF
Trigger: AAACGCCCACTCATCCTGCTTGTCCCGCAGAGAGCATTTGTCAAGCTGGCCTTTCTCCAACTGGGTCACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 72 bp CCTGGTGAGGGGATGTCAGAGACTTTATTGCCGTCCTaGCCAACAAAGGCCTTCAGGCTTTACATGAGAGCA +
Preference number: 3 (lower is better)
Translates to: PGEGMSETLLPS*PTKAFRLYMRA
Trigger: TGCTCTCATGTAAAGCCTGAAGGCCTTTGTTGGGCAGGACGGCAATAAAGTCTCTGACATCCCCTCACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR GCA 72 bp TGTACAGACCTGGTGAGGGGATGTCAGAGACTTTATTaGCGTCCTGCCCAACAAAGGCCTTCAGGCTTTACA +
Preference number: 3 (lower is better)
Translates to: CTDLVRGCQRLY*RPAQQRPSGFT
Trigger: TGTAAAGCCTGAAGGCCTTTGTTGGGCAGGACGGCAATAAAGTCTCTGACATCCCCTCACCAGGTCTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR TCA 72 bp CTGCAGTTCCCACCAGCAGCAGGAAATATTGAGGTGTaGCCAGAAGGGGAACTTCCTAGCATACACGAGAAA +
Preference number: 3 (lower is better)
Translates to: LQFPPAAGNIEV*PEGELPSIHEK
Trigger: TTTCTCGTGTATGCTAGGAAGTTCCCCTTCTGGTCACACCTCAATATTTCCTGCTGCTGGTGGGAACTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GCCCCACCGCCTCTCCCAAGGCCCTCCAAGGGTCTCGGCCATCCGGGGACAGCAAGGGGCTCCTGGCTCTaGGGCCCGGTGCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: APPPLPRPSKGLGHPGTARGSWL*GPVPPS
Trigger: GGAGGGTGGCACCGGGCCCCAGAGCCAGGAGCCCCT...TGCTGTCCCCGGATGGCCGAGACCCTTGGAGGGCCTTGGGAGAGGCGGTGGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp CACGAGGCTGCCCTTGGCCTTGGAGCACCACCCCCACCGGGCAGCAGCAGGGCCCCCGCAGCAACCCAATaGCACCCGGATGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: HEAALGLGAPPPPGSSRAPAATQ*HPDACP
Trigger: GGGGCAGGCATCCGGGTGTCATTGGGTTGCTGCGGG...GGCCCTGCTGCTGCCCGGTGGGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CACGAGGCTGCCCTTGGCCTTGGAGCACCACCCCCACCGGGCAGCAGCAGGGCCAGGCTTCCCCGGCCCTaGCACGCTCGCATGGCGTCA +
Preference number: 4 (lower is better)
Translates to: HEAALGLGAPPPPGSSRARLPRP*HARMAS
Trigger: TGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCT...GGCCCTGCTGCTGCCCGGTGGGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CACGAGGCTGCCCTTGGCCTTGGAGCACCACCCCCACCGGGCAGCAGCAGGGCCAGCTCCACAAGCGCCTaGAGCGCCTCCACGTCACCG +
Preference number: 4 (lower is better)
Translates to: HEAALGLGAPPPPGSSRASSTSA*SASTSP
Trigger: CGGTGACGTGGAGGCGCTGCAGGCGCTTGTGGAGCT...GGCCCTGCTGCTGCCCGGTGGGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CACGAGGCTGCCCTTGGCCTTGGAGCACCACCCCCACCGGGCAGCAGCAGGGCCCCCGGCTGTTCCCACTaGACGCCAGAGAGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: HEAALGLGAPPPPGSSRAPGCSH*TPESQR
Trigger: CCTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGG...GGCCCTGCTGCTGCCCGGTGGGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CACGAGGCTGCCCTTGGCCTTGGAGCACCACCCCCACCGGGCAGCAGCAGGGCCTGGGCAGAGGGTGTCTaGAGGAGGGACCAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HEAALGLGAPPPPGSSRAWAEGV*RRDQPG
Trigger: CCCAGGCTGGTCCCTCCTCCAGACACCCTCTGCCCA...GGCCCTGCTGCTGCCCGGTGGGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GCCCCACCGCCTCTCCCAAGGCCCTCCAAGGGTCTCGGCCATCCGGGGACAGCAGGGTCCCACGGGCACTaGGCACCTGGCTGTGCCTCA +
Preference number: 4 (lower is better)
Translates to: APPPLPRPSKGLGHPGTAGSHGH*APGCAS
Trigger: TGAGGCACAGCCAGGTGCCCAGTGCCCGTGGGACCC...TGCTGTCCCCGGATGGCCGAGACCCTTGGAGGGCCTTGGGAGAGGCGGTGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp GCCTGGAGGGAGGCAGCCCCCATGCTCCTCACACCCAGCAAGAAGGGGTCAGGGCCAGCAGCAGCGGGCTaGAGCCATCCGTGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: AWREAAPMLLTPSKKGSGPAAAG*SHPCPG
Trigger: CCCGGGACACGGATGGCTTCAGCCCGCTGCTGCTGG...CCCTGACCCCTTCTTGCTGGGTGTGAGGAGCATGGGGGCTGCCTCCCTCCAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CACGAGGCTGCCCTTGGCCTTGGAGCACCACCCCCACCGGGCAGCAGCAGGGCCTGGGCAAAGGCAGGGTaGCAGGAAGGGGGAGTGGCA +
Preference number: 4 (lower is better)
Translates to: HEAALGLGAPPPPGSSRAWAKAG*QEGGVA
Trigger: TGCCACTCCCCCTTCCTGCCACCCTGCCTTTGCCCA...GGCCCTGCTGCTGCCCGGTGGGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GCCTGGAGGGAGGCAGCCCCCATGCTCCTCACACCCAGCAAGAAGGGGTCAGGGCCCCAGGTCAGCCCCTaGCTGCCACCACACCTGCAG +
Preference number: 4 (lower is better)
Translates to: AWREAAPMLLTPSKKGSGPQVSP*LPPHLQ
Trigger: CTGCAGGTGTGGTGGCAGGCAGGGGCTGACCTGGGG...CCCTGACCCCTTCTTGCTGGGTGTGAGGAGCATGGGGGCTGCCTCCCTCCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CACGAGGCTGCCCTTGGCCTTGGAGCACCACCCCCACCGGGCAGCAGCAGGGCCTCTTCCCTTACAGGGTaGCCTGGCTCACGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: HEAALGLGAPPPPGSSRASSLTG*PGSRWR
Trigger: CCTCCACCGTGAGCCAGGCCACCCTGTAAGGGAAGA...GGCCCTGCTGCTGCCCGGTGGGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCGACAGCAGGGGCTCCTaGCTCTGGGGCCCGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPDSRGS*LWGPVP
Trigger: TGGCACCGGGCCCCAGAGCCAGGAGCCCCTGCTGTC...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GCCTGGAGGGAGGCAGCCCCCATGCTCCTCACACCCAGCAAGAAGGGGTCAGGGCATCTGCCCAGCCCGTaGCCCCCAAGCCGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: AWREAAPMLLTPSKKGSGHLPSP*PPSRLC
Trigger: GCAGAGACGGCTTGGGGGCCACGGGCTGGGCAGATG...CCCTGACCCCTTCTTGCTGGGTGTGAGGAGCATGGGGGCTGCCTCCCTCCAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp CACGAGGCTGCCCTTGGCCTTGGAGCACCACCCCCACCGGGCAGCAGCAGGGCCTGTCGGTGCCGTGGATaGCCACAAAGCCGTGGTACT +
Preference number: 4 (lower is better)
Translates to: HEAALGLGAPPPPGSSRACRCRG*PQSRGT
Trigger: AGTACCACGGCTTTGTGGTCATCCACGGCACCGACA...GGCCCTGCTGCTGCCCGGTGGGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp GAAGCAGGTGGGCACTGCCGTGTGCAGGAGCAACCGGGGAGACCAGGTGGGCTCCAGCCCCTCAGGAGCTaGGGGAAGCAGGTGGGCACT +
Preference number: 4 (lower is better)
Translates to: EAGGHCRVQEQPGRPGGLQPLRS*GKQVGT
Trigger: AGTGCCCACCTGCTTCCCTCAGCTCCTGAGGGGCTG...GAGCCCACCTGGTCTCCCCGGTTGCTCCTGCACACGGCAGTGCCCACCTGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp CACGAGGCTGCCCTTGGCCTTGGAGCACCACCCCCACCGGGCAGCAGCAGGGCCGCCCTGGGATCCAGGTaGTTCGAGATGGGCTATAGG +
Preference number: 4 (lower is better)
Translates to: HEAALGLGAPPPPGSSRAALGSR*FEMGYR
Trigger: CCTATAGCCCATCTCGAATCACCTGGATCCCAGGGC...GGCCCTGCTGCTGCCCGGTGGGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCTCCTCTGGTTGCGGCTaGCCGGGGGTAGCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPSSGCG*PGVAPG
Trigger: CCCTGGTGCTACCCCCGGCCAGCCGCAACCAGAGGA...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCTCCACGTCACCGGCGTaGGCAGCAGCACAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPSTSPA*AAAQAR
Trigger: CCTGGCCTGTGCTGCTGCCCACGCCGGTGACGTGGA...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGGGGAGCCCCGAGCAGTaGCCCTGCACCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SPRPGGSRVQHPRELTREGSPEQ*PCTSCH
Trigger: GTGGCAGGAGGTGCAGGGCCACTGCTCGGGGCTCCC...CTCTCTCGTCAGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 72 bp TCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTaGTGCAAGGCCCAGGCACACCTGTGTCGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: SPALPRSHGVTL*CKAQAHLCRGE
Trigger: CTCACCCCGACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 72 bp GCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTaGTTGTGCAAGGCCCAGGCACACCTGTGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: ASPALPRSHGVT*LCKAQAHLCRG
Trigger: ACCCCGACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 72 bp CCAGTCCTGGGCAGACTCTTCCCGACGCACAGCCACTaGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGT +
Preference number: 4 (lower is better)
Translates to: PVLGRLFPTHSH*DGLPSPRWLPC
Trigger: ACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp TTGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTCGTGTTGCCCTGCAGTaGGGGCCGGCGCTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: LDGLPSPRWLPCPASKGTRVALQ*GPALFH
Trigger: GTGGAAGAGCGCCGGCCCTCACTGCAGGGCAACACG...AGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp AACCAAGGCCTCCCCCAGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTCACCGCCCAGCGTGTTaGCCTGCAGTGAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: NQGLPQREITRCERRHPTHRPAC*PAVRAG
Trigger: GCCGGCCCTCACTGCAGGGCAACACGCTGGGCGGTG...AGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCTGGGGGAGGCCTTGGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCCCGCGGGCTCGGGCGTaGTCCTCGTCATGGAACATG +
Preference number: 4 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPPRARA*SSSWNM
Trigger: CATGTTCCATGACGAGGAGCACGCCCGAGCCCGCGG...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GAAGCAGGTGGGCACTGCCGTGTGCAGGAGCAACCGGGGAGACCAGGTGGGCTCCCACGTCCTGCTCCATaGTGCTGTGCACCACCAGCC +
Preference number: 4 (lower is better)
Translates to: EAGGHCRVQEQPGRPGGLPRPAP*CCAPPA
Trigger: GGCTGGTGGTGCACAGCAGCATGGAGCAGGACGTGG...GAGCCCACCTGGTCTCCCCGGTTGCTCCTGCACACGGCAGTGCCCACCTGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GCCTGGAGGGAGGCAGCCCCCATGCTCCTCACACCCAGCAAGAAGGGGTCAGGGCCCTTCAGGGGAGGCTaGAAGAAGGCCCGAACCAGG +
Preference number: 4 (lower is better)
Translates to: AWREAAPMLLTPSKKGSGPFRGG*KKARTR
Trigger: CCTGGTTCGGGCCTTCTTGCAGCCTCCCCTGAAGGG...CCCTGACCCCTTCTTGCTGGGTGTGAGGAGCATGGGGGCTGCCTCCCTCCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CTTACAGGGTGGCCTGGCTCACGGTGGAGGCTGCATCAGGAGCTTCAGGCAGAGCCCCGGGCGGCCGCGTaGAGTGGGGTTTGGCCGTTA +
Preference number: 4 (lower is better)
Translates to: LTGWPGSRWRLHQELQAEPRAAA*SGVWPL
Trigger: TAACGGCCAAACCCCACTGCACGCGGCCGCCCGGGG...CTCTGCCTGAAGCTCCTGATGCAGCCTCCACCGTGAGCCAGGCCACCCTGTAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp TTGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTGCCTGCCACCACACCTaGAGGCCTTCGAGGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LDGLPSPRWLPCPASKGTACHHT*RPSRSA
Trigger: GGCCGACCTCGAAGGCCTGCAGGTGTGGTGGCAGGC...AGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCCCATGCACCCCACCCTaGCCAGCTCACACGCACAGC +
Preference number: 4 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPPCTPP*PAHTHS
Trigger: GCTGTGCGTGTGAGCTGGGCAGGGTGGGGTGCATGG...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GCCTGGAGGGAGGCAGCCCCCATGCTCCTCACACCCAGCAAGAAGGGGTCAGGGGTGAGCAACAGGCTCTaGCCAGCCCCTCAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AWREAAPMLLTPSKKGSGVSNRL*PAPQEL
Trigger: CAGCTCCTGAGGGGCTGGGCAGAGCCTGTTGCTCAC...CCCTGACCCCTTCTTGCTGGGTGTGAGGAGCATGGGGGCTGCCTCCCTCCAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp AGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGTGGGGAGGCGGGTCCCCCGAGCAGTGGCCCTaGACCTCCTGCCACTTCTGG +
Preference number: 4 (lower is better)
Translates to: SVKLPGVSGATPLWGGGSPEQWP*TSCHFW
Trigger: CCAGAAGTGGCAGGAGGTGCAGGGCCACTGCTCGGG...GGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GCCCAGGCACACCTGTGTCGGGGTGAGGACAGCAAGGATGCCAGCGGCAGTACCTCGCTCCACAGGGCATaGATGGGCACCTGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: AQAHLCRGEDSKDASGSTSLHRA*MGTWAP
Trigger: TGGGGCCCAGGTGCCCATCCATGCCCTGTGGAGCGA...GGTACTGCCGCTGGCATCCTTGCTGTCCTCACCCCGACACAGGTGTGCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TACCAGCCAGGCTTGGGAACCAGGCTGAGGAGCCTGGGGTATGCCCAGGTGCCAGCACGAGGCTGCCCTTaGCCTTGGAGCACCACCCCC +
Preference number: 4 (lower is better)
Translates to: YQPGLGTRLRSLGYAQVPARGCP*PWSTTP
Trigger: GGGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTGC...TGGCACCTGGGCATACCCCAGGCTCCTCAGCCTGGTTCCCAAGCCTGGCTGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp ACGAACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCCTCCCCTCGCCCAGGTaGCTCCCGTGTCCAGCATCC +
Preference number: 4 (lower is better)
Translates to: TNAPSLSVPAVPTARQRALPSPR*LPCPAS
Trigger: GGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAG...GGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGTTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp TTGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTGAAGGATGGGCCAAGTaGCCCCCGCAGAGACCCCAC +
Preference number: 4 (lower is better)
Translates to: LDGLPSPRWLPCPASKGTEGWAK*PPQRPH
Trigger: GTGGGGTCTCTGCGGGGGTCACTTGGCCCATCCTTC...AGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCGGGTTTGGAGGGGACTaGCAATGGGGGTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPGFGGD*QWGSGC
Trigger: GCAGCCAGACCCCCATTGTCAGTCCCCTCCAAACCC...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp TGCCACGCTCGCATGGCGTCACCTTGTTGTGCAAGGCCCAGGCACACCTGTGTCGCCACCCGCAGCTCCTaGAGCAGGTCGGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: CHARMASPCCARPRHTCVATRSS*SRSGLV
Trigger: CACCAAGCCCGACCTGCTGCAGGAGCTGCGGGTGGC...GACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCGCTGCCTCTGCGACGTaGAGGGCGCTGTGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVAASAT*RALCPS
Trigger: TGACGGGCACAGCGCCCTGCACGTCGCAGAGGCAGC...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp TGCCACGCTCGCATGGCGTCACCTTGTTGTGCAAGGCCCAGGCACACCTGTGTCTGCCAGGTTCCCGGCTaGCTCTGCGACGTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: CHARMASPCCARPRHTCVCQVPG*LCDVQG
Trigger: GCCCTGCACGTCGCAGAGGCAGCCGGGAACCTGGCA...GACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GCCTGGAGGGAGGCAGCCCCCATGCTCCTCACACCCAGCAAGAAGGGGTCAGGGCCCCCAAGCCGTCTCTaGCGAACTCCATCAGTGACC +
Preference number: 4 (lower is better)
Translates to: AWREAAPMLLTPSKKGSGPPSRL*RTPSVT
Trigger: GGTCACTGATGGAGTTCGGCAGAGACGGCTTGGGGG...CCCTGACCCCTTCTTGCTGGGTGTGAGGAGCATGGGGGCTGCCTCCCTCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CTTACAGGGTGGCCTGGCTCACGGTGGAGGCTGCATCAGGAGCTTCAGGCAGAGCCCAGCTCTGCCCTGTaGCAACGCAGAGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LTGWPGSRWRLHQELQAEPSSAL*QRRALG
Trigger: GCCCAGGGCTCTGCGTTGGCACAGGGCAGAGCTGGG...CTCTGCCTGAAGCTCCTGATGCAGCCTCCACCGTGAGCCAGGCCACCCTGTAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GCCTGGAGGGAGGCAGCCCCCATGCTCCTCACACCCAGCAAGAAGGGGTCAGGGCTGGGCACCTGGCTGTaGCTCATTCCTGAGTCTCCC +
Preference number: 4 (lower is better)
Translates to: AWREAAPMLLTPSKKGSGLGTWL*LIPESP
Trigger: GGGAGACTCAGGAATGAGGCACAGCCAGGTGCCCAG...CCCTGACCCCTTCTTGCTGGGTGTGAGGAGCATGGGGGCTGCCTCCCTCCAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCCACTCCGCATGCCAATaGTGCCGCCGGTGTAGACGG +
Preference number: 4 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPHSACQ*CRRCRR
Trigger: CCGTCTACACCGGCGGCACCATTGGCATGCGGAGTG...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GAAGCAGGTGGGCACTGCCGTGTGCAGGAGCAACCGGGGAGACCAGGTGGGCTCCAGCTGCATAGTCTGTaGTCACAGCCCCCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: EAGGHCRVQEQPGRPGGLQLHSL*SQPPGG
Trigger: GCCTCCAGGGGGCTGTGACCACAGACTATGCAGCTG...GAGCCCACCTGGTCTCCCCGGTTGCTCCTGCACACGGCAGTGCCCACCTGCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp ACGAACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCCGCCGGCTCCCGCCATaGCCATGCCAGCTGCATAGT +
Preference number: 4 (lower is better)
Translates to: TNAPSLSVPAVPTARQRARRLPP*PCQLHS
Trigger: ACTATGCAGCTGGCATGGCCATGGCGGGAGCCGGCG...GGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGTTCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CGGCATCAGTCGGTGTGTCTACACTGGCAGGTTGGCACCTGCTCTGGGAGGGTGTCTGGGCATGGGGCCTaGGCACCAACCGCACCCTCC +
Preference number: 4 (lower is better)
Translates to: RHQSVCLHWQVGTCSGRVSGHGA*APTAPS
Trigger: GGAGGGTGCGGTTGGTGCCCAGGCCCCATGCCCAGA...CACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGACTGATGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp AGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTGCAGCACTTCTGGGCATaGGGCCTGGGCACCAACCGC +
Preference number: 4 (lower is better)
Translates to: RSKGFPGPATLAWRHLVVQHFWA*GLGTNR
Trigger: GCGGTTGGTGCCCAGGCCCCATGCCCAGAAGTGCTG...CACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GCCCCACCGCCTCTCCCAAGGCCCTCCAAGGGTCTCGGCCATCCGGGGACAGCACTCCTACAGGCACAGTaGGGACGAAACACACCAACG +
Preference number: 4 (lower is better)
Translates to: APPPLPRPSKGLGHPGTALLQAQ*GRNTPT
Trigger: CGTTGGTGTGTTTCGTCCCCACTGTGCCTGTAGGAG...TGCTGTCCCCGGATGGCCGAGACCCTTGGAGGGCCTTGGGAGAGGCGGTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp AGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGTGGGGAGGCGGGTCCCGGGCACTGGGCACCTaGCTGTGCCTCATTCCTGAG +
Preference number: 4 (lower is better)
Translates to: SVKLPGVSGATPLWGGGSRALGT*LCLIPE
Trigger: CTCAGGAATGAGGCACAGCCAGGTGCCCAGTGCCCG...GGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp ACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCAGAGCGACGCACAGCCACTTaGATGGGCTCCCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: TLQACLSRLFPLHAREPERRTAT*MGSPRP
Trigger: TGGGCGAGGGGAGCCCATCCAAGTGGCTGTGCGTCG...CTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GCCCAGGCACACCTGTGTCGGGGTGAGGACAGCAAGGATGCCAGCGGCAGTACCGGTCTAGCCCAGTCCTaGGCAGACTCTTCCCGACGC +
Preference number: 4 (lower is better)
Translates to: AQAHLCRGEDSKDASGSTGLAQS*ADSSRR
Trigger: GCGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACC...GGTACTGCCGCTGGCATCCTTGCTGTCCTCACCCCGACACAGGTGTGCCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 72 bp GGACAGCAAGGATGCCAGCGGCAGTACCAGCCAGGCTaGGGAACCAGGCTGAGGAGCCTGGGGTATGCCCAG +
Preference number: 4 (lower is better)
Translates to: GQQGCQRQYQPG*GTRLRSLGYAQ
Trigger: CTGGGCATACCCCAGGCTCCTCAGCCTGGTTCCCAAGCCTGGCTGGTACTGCCGCTGGCATCCTTGCTGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCTCAGCAGCTCCTTCCTaGCATCCAGGCTCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPSAAPS*HPGSAL
Trigger: CAGGGCTGAGCCTGGATGTCAGGAAGGAGCTGCTGA...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp AGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTGCAGTGGGGTCATGCCTaGGACCCCTCCAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RSKGFPGPATLAWRHLVVQWGHA*DPSSRS
Trigger: TGACCTGCTGGAGGGGTCTCAGGCATGACCCCACTG...CACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp ACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCAGAGCAGTGCATGCACACATaGTGGGGGCCAGGGGTCCAC +
Preference number: 4 (lower is better)
Translates to: TLQACLSRLFPLHAREPEQCMHT*WGPGVH
Trigger: GTGGACCCCTGGCCCCCATCATGTGTGCATGCACTG...CTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCGCTTGGGAACCAGGCTaGGGAGCCTGGGGTATGCCC +
Preference number: 4 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVAWEPG*GAWGMP
Trigger: GGGCATACCCCAGGCTCCTCAGCCTGGTTCCCAAGC...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCTGGGCCTCACCAGGGTaGGGAGCAAAGGCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVWASPG*GAKASP
Trigger: CGGGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCA...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp ACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCAGAGAACCCGGAGCAGCACTaGGTGGGGTGGCGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: TLQACLSRLFPLHAREPENPEQH*VGWREQ
Trigger: TTGCTCACGCCACCCCACTCAGTGCTGCTCCGGGTT...CTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GCTGCCATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCACCCAGCGTGTTGCCCTaGAGTGAGGGCCGGCGCTCT +
Preference number: 4 (lower is better)
Translates to: AAMWANVSHLQLSQPGAAPSVLP*SEGRRS
Trigger: AGAGCGCCGGCCCTCACTGCAGGGCAACACGCTGGG...TGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACATGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp TACCAGCCAGGCTTGGGAACCAGGCTGAGGAGCCTGGGGTATGCCCAGGTGCCAGCCAGCCATGAGCAGTaGCCCCAGCAGGTTCTCACG +
Preference number: 4 (lower is better)
Translates to: YQPGLGTRLRSLGYAQVPASHEQ*PQQVLT
Trigger: CGTGAGAACCTGCTGGGGGCACTGCTCATGGCTGGC...TGGCACCTGGGCATACCCCAGGCTCCTCAGCCTGGTTCCCAAGCCTGGCTGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp TCTGGTCTAGCCCAGTCCTGGGCAGACTCTTCCCGACGCACAGCCACTTGGATGCCAATGACACCCGGATaGCTGCCCCGCACGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGLAQSWADSSRRTATWMPMTPG*LPRTAS
Trigger: GCTGGCCGTGCGGGGCAGGCATCCGGGTGTCATTGG...CATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCGAGGAGCCTGGGGTATaGCCAGGTGCCAAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVEEPGV*PGAKGQ
Trigger: CTGGCCCTTGGCACCTGGGCATACCCCAGGCTCCTC...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CGGCATCAGTCGGTGTGTCTACACTGGCAGGTTGGCACCTGCTCTGGGAGGGTGGTGGGCACTGCCGTGTaGAGGAGCAACCGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: RHQSVCLHWQVGTCSGRVVGTAV*RSNRGD
Trigger: GTCTCCCCGGTTGCTCCTGCACACGGCAGTGCCCAC...CACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGACTGATGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCTTGGGGCCAGGTCACTaGCCAGCTCAGAGCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVLGPGH*PAQSPG
Trigger: CCCTGGGCTCTGAGCTGGGCAGTGACCTGGCCCCAA...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GCCTGGAGGGAGGCAGCCCCCATGCTCCTCACACCCAGCAAGAAGGGGTCAGGGCGATGGTCATGTCACTaGAGTCGAAGAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: AWREAAPMLLTPSKKGSGRWSCH*SRRGAG
Trigger: GCCAGCCCCTCTTCGACTCCAGTGACATGACCATCG...CCCTGACCCCTTCTTGCTGGGTGTGAGGAGCATGGGGGCTGCCTCCCTCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp AGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGTGGGGAGGCGGGTCCGTGGTCACAGCCCCCTaGAGGCAGTGGGTACAGTTG +
Preference number: 4 (lower is better)
Translates to: SVKLPGVSGATPLWGGGSVVTAP*RQWVQL
Trigger: CAACTGTACCCACTGCCTCCAGGGGGCTGTGACCAC...GGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GAAGCAGGTGGGCACTGCCGTGTGCAGGAGCAACCGGGGAGACCAGGTGGGCTCAAAGGAACCGTCACCTaGGCAGGTAGAGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: EAGGHCRVQEQPGRPGGLKGTVT*AGREAW
Trigger: CCAGGCCTCTCTACCTGCCCAGGTGACGGTTCCTTT...GAGCCCACCTGGTCTCCCCGGTTGCTCCTGCACACGGCAGTGCCCACCTGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp AGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTGCGGAGCAGCACTGAGTaGGGTGGCGTGAGCAACAGG +
Preference number: 4 (lower is better)
Translates to: RSKGFPGPATLAWRHLVVRSSTE*GGVSNR
Trigger: CCTGTTGCTCACGCCACCCCACTCAGTGCTGCTCCG...CACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GCTGCCATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCAAGCCTCCTGAGACACTaGCCCAGTCCCGGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: AAMWANVSHLQLSQPGAASLLRH*PSPGAP
Trigger: GGGAGCCCCGGGACTGGGCCAGTGTCTCAGGAGGCT...TGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACATGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GCCCCACCGCCTCTCCCAAGGCCCTCCAAGGGTCTCGGCCATCCGGGGACAGCACCAGGTGATTCGAGATaGGCTATAGGAACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: APPPLPRPSKGLGHPGTAPGDSR*AIGTKA
Trigger: GGCCTTGGTTCCTATAGCCCATCTCGAATCACCTGG...TGCTGTCCCCGGATGGCCGAGACCCTTGGAGGGCCTTGGGAGAGGCGGTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCCTCACCACCAGAGTGTaGAGCCCCCTTGACACTCAC +
Preference number: 4 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPLTTRV*SPLDTH
Trigger: GTGAGTGTCAAGGGGGCTTCACACTCTGGTGGTGAG...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp AGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTGACACCTGTGTCGGGGTaGGGACAGCAAGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: RSKGFPGPATLAWRHLVVTPVSG*GQQGCQ
Trigger: CTGGCATCCTTGCTGTCCTCACCCCGACACAGGTGT...CACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCGCCGAACTCCATCAGTaGCCCAGTTGGAGAAAGGCC +
Preference number: 4 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPAELHQ*PSWRKA
Trigger: GGCCTTTCTCCAACTGGGTCACTGATGGAGTTCGGC...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CGGCATCAGTCGGTGTGTCTACACTGGCAGGTTGGCACCTGCTCTGGGAGGGTGGCACAGCTCCGTCCCTaGTTCCTCCAGCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: RHQSVCLHWQVGTCSGRVAQLRP*FLQLLG
Trigger: ACCCAGGAGCTGGAGGAAGCAGGGACGGAGCTGTGC...CACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGACTGATGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GCTGCCATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCAGCTCACACGCACAGCTaGCCCCGGAAGGATGGGCCA +
Preference number: 4 (lower is better)
Translates to: AAMWANVSHLQLSQPGAAAHTHS*PRKDGP
Trigger: TGGCCCATCCTTCCGGGGGCAGCTGTGCGTGTGAGC...TGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACATGGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp TGCCACGCTCGCATGGCGTCACCTTGTTGTGCAAGGCCCAGGCACACCTGTGTCCACCTGCCCAGGCTGTaGAACCAGGCAGGCACAGCT +
Preference number: 4 (lower is better)
Translates to: CHARMASPCCARPRHTCVHLPRL*NQAGTA
Trigger: AGCTGTGCCTGCCTGGTTGCACAGCCTGGGCAGGTG...GACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp ACGAACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCAAGAAGGCACGAGGCTaGCCTTGGCCTTGGAGCACC +
Preference number: 4 (lower is better)
Translates to: TNAPSLSVPAVPTARQRAKKARG*PWPWST
Trigger: GGTGCTCCAAGGCCAAGGGCAGCCTCGTGCCTTCTT...GGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGTTCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CGGCATCAGTCGGTGTGTCTACACTGGCAGGTTGGCACCTGCTCTGGGAGGGTGTGGCAGGTTGGCACCTaGTCTGGGAGGGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RHQSVCLHWQVGTCSGRVWQVGT*SGRVLP
Trigger: TGGCAGCACCCTCCCAGAGCAGGTGCCAACCTGCCA...CACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGACTGATGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCATGGTGTCGGTGCCGTaGATGACCACAAAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPMVSVP*MTTKPW
Trigger: CCACGGCTTTGTGGTCATCCACGGCACCGACACCAT...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp AGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTGGCATGGATGGGCACCTaGGCCCCAGTGAGGATGACA +
Preference number: 4 (lower is better)
Translates to: RSKGFPGPATLAWRHLVVAWMGT*APVRMT
Trigger: TGTCATCCTCACTGGGGCCCAGGTGCCCATCCATGC...CACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGTCCGAGCGTCTACCTTaGTTGCCCGGTTGCCCCGAA +
Preference number: 4 (lower is better)
Translates to: SPRPGGSRVQHPRELTRESERLP*LPGCPE
Trigger: TTCGGGGCAACCGGGCAACCAAGGTAGACGCTCGGA...CTCTCTCGTCAGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp AGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTGTGTCAGCACCCACTGTaGCCAGAGGCAGCAGGTTCG +
Preference number: 4 (lower is better)
Translates to: RSKGFPGPATLAWRHLVVCQHPL*PEAAGS
Trigger: CGAACCTGCTGCCTCTGGCCACAGTGGGTGCTGACA...CACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CTTACAGGGTGGCCTGGCTCACGGTGGAGGCTGCATCAGGAGCTTCAGGCAGAGGCAGGTCGGGCTTGGTaGGTCCGTTCCCTGAACCGA +
Preference number: 4 (lower is better)
Translates to: LTGWPGSRWRLHQELQAEAGRAW*VRSLNR
Trigger: TCGGTTCAGGGAACGGACCCACCAAGCCCGACCTGC...CTCTGCCTGAAGCTCCTGATGCAGCCTCCACCGTGAGCCAGGCCACCCTGTAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp ACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCAGAGAGGCTCAGCCCTGGCTaGCCCAGCACATACGATAGC +
Preference number: 4 (lower is better)
Translates to: TLQACLSRLFPLHAREPERLSPG*PSTYDS
Trigger: GCTATCGTATGTGCTGGGCCAGCCAGGGCTGAGCCT...CTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp AACCAAGGCCTCCCCCAGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTCCTTACAGGGTGGCCTaGCTCACGGTGGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: NQGLPQREITRCERRHPTPYRVA*LTVEAA
Trigger: TGCAGCCTCCACCGTGAGCCAGGCCACCCTGTAAGG...AGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCTGGGGGAGGCCTTGGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TACCAGCCAGGCTTGGGAACCAGGCTGAGGAGCCTGGGGTATGCCCAGGTGCCAGCCAAGGGCCAGCTCTaGGGTCATGCTTTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: YQPGLGTRLRSLGYAQVPAKGQL*GHAFAL
Trigger: GAGGGCAAAAGCATGACCCCAGAGCTGGCCCTTGGC...TGGCACCTGGGCATACCCCAGGCTCCTCAGCCTGGTTCCCAAGCCTGGCTGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGGAGGGTGCTGCCATGTaGGCTAACGTGAGCCACCTG +
Preference number: 4 (lower is better)
Translates to: SPRPGGSRVQHPRELTREEGAAM*ANVSHL
Trigger: CAGGTGGCTCACGTTAGCCCACATGGCAGCACCCTC...CTCTCTCGTCAGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CTTACAGGGTGGCCTGGCTCACGGTGGAGGCTGCATCAGGAGCTTCAGGCAGAGCTGGTTACCTCCAGCTaGGGAAGGGCGGTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LTGWPGSRWRLHQELQAELVTSS*GRAVLE
Trigger: CTCCAGGACCGCCCTTCCCCAGCTGGAGGTAACCAG...CTCTGCCTGAAGCTCCTGATGCAGCCTCCACCGTGAGCCAGGCCACCCTGTAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp GACAAGCAGGATGAGTGGGCGTTTCTACACTACAGGACACTCACCCCCGGCATCGGCTGCCGCTCAGACTaGGGAGCCAGGAGACCCCAC +
Preference number: 4 (lower is better)
Translates to: DKQDEWAFLHYRTLTPGIGCRSD*GARRPH
Trigger: GTGGGGTCTCCTGGCTCCTCAGTCTGAGCGGCAGCC...GATGCCGGGGGTGAGTGTCCTGTAGTGTAGAAACGCCCACTCATCCTGCTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp ACGAACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCGCAGGTTCTCCAGCATaGAGGACAGCATCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TNAPSLSVPAVPTARQRAAGSPA*RTASRQ
Trigger: CTGCCTCGATGCTGTCCTTCATGCTGGAGAACCTGC...GGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGTTCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp AACCAAGGCCTCCCCCAGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGGTGGGTCCGTTCCCTaGACCGAAGGTCTCCATGAC +
Preference number: 4 (lower is better)
Translates to: NQGLPQREITRCERRHPTGGSVP*TEGLHD
Trigger: GTCATGGAGACCTTCGGTTCAGGGAACGGACCCACC...AGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCTGGGGGAGGCCTTGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCTCTGCAGCAGCATGGTaGCTGCCTCTGTGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVSAAAW*LPLCGL
Trigger: GAGGCCACACAGAGGCAGTCACCATGCTGCTGCAGA...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCTGCTCCATGCTGCTGTaGACCACCAGCCCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVCSMLL*TTSPAF
Trigger: GAAGGCTGGGCTGGTGGTGCACAGCAGCATGGAGCA...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp TCTGGTCTAGCCCAGTCCTGGGCAGACTCTTCCCGACGCACAGCCACTTGGATGAGCAGGCCCACGTCCTaGTCCATGCTGCTGTGCACC +
Preference number: 4 (lower is better)
Translates to: SGLAQSWADSSRRTATWMSRPTS*SMLLCT
Trigger: GGTGCACAGCAGCATGGAGCAGGACGTGGGCCTGCT...CATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CGGCATCAGTCGGTGTGTCTACACTGGCAGGTTGGCACCTGCTCTGGGAGGGTGGCTCACGGTGGAGGCTaGATCAGGAGCTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: RHQSVCLHWQVGTCSGRVAHGGG*IRSFRQ
Trigger: CTGCCTGAAGCTCCTGATGCAGCCTCCACCGTGAGC...CACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGACTGATGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCTCCCAGGCCAGTGCATaGACACATGATGGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVSQASA*THDGGQ
Trigger: CTGGCCCCCATCATGTGTGCATGCACTGGCCTGGGA...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp TACCAGCCAGGCTTGGGAACCAGGCTGAGGAGCCTGGGGTATGCCCAGGTGCCAAGGCATTTGTCCAGATaGCCCACCGCCTCTCCCAAG +
Preference number: 4 (lower is better)
Translates to: YQPGLGTRLRSLGYAQVPRHLSR*PTASPK
Trigger: CTTGGGAGAGGCGGTGGGGCATCTGGACAAATGCCT...TGGCACCTGGGCATACCCCAGGCTCCTCAGCCTGGTTCCCAAGCCTGGCTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GCCCAGGCACACCTGTGTCGGGGTGAGGACAGCAAGGATGCCAGCGGCAGTACCCCACCCCTTCTCACCTaGACCAGGCATTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: AQAHLCRGEDSKDASGSTPPLLT*TRHLSR
Trigger: TCTGGACAAATGCCTGGTGCAGGTGAGAAGGGGTGG...GGTACTGCCGCTGGCATCCTTGCTGTCCTCACCCCGACACAGGTGTGCCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCTGGCCCTGCACCTCCTaGCACTTCTGGGTGATTCTA +
Preference number: 4 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPWPCTS*HFWVIL
Trigger: TAGAATCACCCAGAAGTGGCAGGAGGTGCAGGGCCA...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp AGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTGGACGGGGCCACTCTGTaGCTTAGCTTCCTCAGCCAT +
Preference number: 4 (lower is better)
Translates to: RSKGFPGPATLAWRHLVVDGATL*LSFLSH
Trigger: ATGGCTGAGGAAGCTAAGGCACAGAGTGGCCCCGTC...CACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GCTGCCATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCAGCAGCAGGTCGGGCTTaGTGGGTCCGTTCCCTGAAC +
Preference number: 4 (lower is better)
Translates to: AAMWANVSHLQLSQPGAAAAGRA*WVRSLN
Trigger: GTTCAGGGAACGGACCCACCAAGCCCGACCTGCTGC...TGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACATGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGGACGGGGAGAAGGTGACAAGCAGCACAGGCCAGGCTaGGCACCAGGGCATTCCGCA +
Preference number: 4 (lower is better)
Translates to: PCPASKGTDERGRGEGDKQHRPG*APGHSA
Trigger: TGCGGAATGCCCTGGTGCCCAGCCTGGCCTGTGCTG...CTTGTCACCTTCTCCCCGTCCTCTCTCGTCAGTTCCCTTGGATGCTGGACACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TTGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTTACATGAGAGCAGGCTaGGAAGCAGCCCCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LDGLPSPRWLPCPASKGTYMRAG*EAAPAV
Trigger: CACTGCTGGGGCTGCTTCCCAGCCTGCTCTCATGTA...AGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCATGCTTTTGCCCTCCTaGGGCTCCAGTCCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVMLLPS*GSSPEA
Trigger: GGCCTCTGGACTGGAGCCCCAGGAGGGCAAAAGCAT...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TACCAGCCAGGCTTGGGAACCAGGCTGAGGAGCCTGGGGTATGCCCAGGTGCCACATCCCACGAGGGTTTaGAGGGGACTGACAATGGGG +
Preference number: 4 (lower is better)
Translates to: YQPGLGTRLRSLGYAQVPHPTRV*RGLTMG
Trigger: CCCCATTGTCAGTCCCCTCCAAACCCTCGTGGGATG...TGGCACCTGGGCATACCCCAGGCTCCTCAGCCTGGTTCCCAAGCCTGGCTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GCCTGGAGGGAGGCAGCCCCCATGCTCCTCACACCCAGCAAGAAGGGGTCAGGGGTGAGCCACCAAGCCTaGCCACCACTCCTTAATTCT +
Preference number: 4 (lower is better)
Translates to: AWREAAPMLLTPSKKGSGVSHQA*PPLLNS
Trigger: AGAATTAAGGAGTGGTGGCCAGGCTTGGTGGCTCAC...CCCTGACCCCTTCTTGCTGGGTGTGAGGAGCATGGGGGCTGCCTCCCTCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp GAAGCAGGTGGGCACTGCCGTGTGCAGGAGCAACCGGGGAGACCAGGTGGGCTCTTGCCCCGAAACAGCTaGTTCTGGAAGAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: EAGGHCRVQEQPGRPGGLLPRNS*FWKKRQ
Trigger: CTGCCTTTTCTTCCAGAATCAGCTGTTTCGGGGCAA...GAGCCCACCTGGTCTCCCCGGTTGCTCCTGCACACGGCAGTGCCCACCTGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp TGCCACGCTCGCATGGCGTCACCTTGTTGTGCAAGGCCCAGGCACACCTGTGTCAGTGTGAAGCCCCCTTaGCACTCACAGGCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: CHARMASPCCARPRHTCVSVKPP*HSQASA
Trigger: TGCGGAAGCCTGTGAGTGTCAAGGGGGCTTCACACT...GACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp CTTACAGGGTGGCCTGGCTCACGGTGGAGGCTGCATCAGGAGCTTCAGGCAGAGCCATGTGGGCTAACGTaGGCCACCTGCAGCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LTGWPGSRWRLHQELQAEPCGLT*ATCSFH
Trigger: GTGAAAGCTGCAGGTGGCTCACGTTAGCCCACATGG...CTCTGCCTGAAGCTCCTGATGCAGCCTCCACCGTGAGCCAGGCCACCCTGTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp TGCCACGCTCGCATGGCGTCACCTTGTTGTGCAAGGCCCAGGCACACCTGTGTCAGCATCCAAGGGAACTaGCGAGAGAGGACGGGGAGA +
Preference number: 4 (lower is better)
Translates to: CHARMASPCCARPRHTCVSIQGN*RERTGR
Trigger: TCTCCCCGTCCTCTCTCGTCAGTTCCCTTGGATGCT...GACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp TACCAGCCAGGCTTGGGAACCAGGCTGAGGAGCCTGGGGTATGCCCAGGTGCCACCTTGGTTGCCCGGTTaGCCCGAAACAGCTGATTCT +
Preference number: 4 (lower is better)
Translates to: YQPGLGTRLRSLGYAQVPPWLPG*PETADS
Trigger: AGAATCAGCTGTTTCGGGGCAACCGGGCAACCAAGG...TGGCACCTGGGCATACCCCAGGCTCCTCAGCCTGGTTCCCAAGCCTGGCTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GCTGCCATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCAGGCGTCACCTTGTTGTaGAAGGCCCAGGCACACCTG +
Preference number: 4 (lower is better)
Translates to: AAMWANVSHLQLSQPGAAGVTLL*KAQAHL
Trigger: CAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCC...TGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACATGGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGGACGGGGAGAAGGTGACAAGGAAGCAGGTGGGCACTaGCGTGTGCAGGAGCAACCG +
Preference number: 4 (lower is better)
Translates to: PCPASKGTDERGRGEGDKEAGGH*RVQEQP
Trigger: CGGTTGCTCCTGCACACGGCAGTGCCCACCTGCTTC...CTTGTCACCTTCTCCCCGTCCTCTCTCGTCAGTTCCCTTGGATGCTGGACACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp AACCAAGGCCTCCCCCAGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTCTCGGCCTCCCAAAGTaGTGGGATTGCAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: NQGLPQREITRCERRHPTLGLPK*WDCRCE
Trigger: CTCACACCTGCAATCCCAGCACTTTGGGAGGCCGAG...AGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCTGGGGGAGGCCTTGGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp AGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTGCCTCGTCATGGAACATaGGCAGTGTCCTCAGGATGG +
Preference number: 4 (lower is better)
Translates to: RSKGFPGPATLAWRHLVVPRHGT*AVSSGW
Trigger: CCATCCTGAGGACACTGCCCATGTTCCATGACGAGG...CACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TTCGCCATGTTGGCTGTTCTCAAACTCCTAGGCTCAAGCTATCCACCCGCCTCGCCTCCAGCTCCTGGGTaGACAGGGAGGCCCCGGCTT +
Preference number: 4 (lower is better)
Translates to: FAMLAVLKLLGSSYPPASPPAPG*TGRPRL
Trigger: AAGCCGGGGCCTCCCTGTCCACCCAGGAGCTGGAGG...CGAGGCGGGTGGATAGCTTGAGCCTAGGAGTTTGAGAACAGCCAACATGGCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCCCTGCCACGCTCGCATaGCGTCACCTTGTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVPATLA*RHLVVQ
Trigger: TTGCACAACAAGGTGACGCCATGCGAGCGTGGCAGG...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TCTGGTCTAGCCCAGTCCTGGGCAGACTCTTCCCGACGCACAGCCACTTGGATGCTGACAATGGGGGTCTaGCTGCCCAGCCTTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGLAQSWADSSRRTATWMLTMGV*LPSLVR
Trigger: CCTCACAAGGCTGGGCAGCCAGACCCCCATTGTCAG...CATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CCAAGGGAACTGACGAGAGAGGACGGGGAGAAGGTGACAAGTACAAGCACCTGCGCACAGCCACTTGGATaGGCTCCCCTCGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: PRELTREDGEKVTSTSTCAQPLG*APLAQV
Trigger: CACCTGGGCGAGGGGAGCCCATCCAAGTGGCTGTGC...GCAGGTGCTTGTACTTGTCACCTTCTCCCCGTCCTCTCTCGTCAGTTCCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp GACAAGCAGGATGAGTGGGCGTTTCTACACTACAGGACACTCACCCCCGGCATCTGTCATGTCGAAGCCTaGGATGACGCCGGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: DKQDEWAFLHYRTLTPGICHVEA*DDAGSR
Trigger: GCGGGAGCCGGCGTCATCTCAGGCTTCGACATGACA...GATGCCGGGGGTGAGTGTCCTGTAGTGTAGAAACGCCCACTCATCCTGCTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp TTGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTGCTGTACAGACCTGGTaGGGGGATGTCAGAGACTTT +
Preference number: 4 (lower is better)
Translates to: LDGLPSPRWLPCPASKGTAVQTW*GDVRDF
Trigger: AAAGTCTCTGACATCCCCTCACCAGGTCTGTACAGC...AGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp TTCGCCATGTTGGCTGTTCTCAAACTCCTAGGCTCAAGCTATCCACCCGCCTCGCTGAGTGGGGTGGCGTaGGCAACAGGCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: FAMLAVLKLLGSSYPPASLSGVA*ATGSAQ
Trigger: CTGGGCAGAGCCTGTTGCTCACGCCACCCCACTCAG...CGAGGCGGGTGGATAGCTTGAGCCTAGGAGTTTGAGAACAGCCAACATGGCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp TGCCACGCTCGCATGGCGTCACCTTGTTGTGCAAGGCCCAGGCACACCTGTGTCGCGGGACAAGCAGGATaGGTGGGCGTTTCTACACTA +
Preference number: 4 (lower is better)
Translates to: CHARMASPCCARPRHTCVAGQAG*VGVSTL
Trigger: TAGTGTAGAAACGCCCACTCATCCTGCTTGTCCCGC...GACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CCAGGCTGTACAGACCTGGTGAGGGGATGTCAGAGACTTTATTGCCGTCCTGCCTCCGCATGCCAATGGTaGCGCCGGTGTAGACGGCCA +
Preference number: 4 (lower is better)
Translates to: PGCTDLVRGCQRLYCRPASACQW*RRCRRP
Trigger: TGGCCGTCTACACCGGCGGCACCATTGGCATGCGGA...GGCAGGACGGCAATAAAGTCTCTGACATCCCCTCACCAGGTCTGTACAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CCAGGCTGTACAGACCTGGTGAGGGGATGTCAGAGACTTTATTGCCGTCCTGCCCGAGCTCACTCCGCATaGCAATGGTGCCGCCGGTGT +
Preference number: 4 (lower is better)
Translates to: PGCTDLVRGCQRLYCRPARAHSA*QWCRRC
Trigger: ACACCGGCGGCACCATTGGCATGCGGAGTGAGCTCG...GGCAGGACGGCAATAAAGTCTCTGACATCCCCTCACCAGGTCTGTACAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GACAAGCAGGATGAGTGGGCGTTTCTACACTACAGGACACTCACCCCCGGCATCCGTCCTGCTCCATGCTaGTGTGCACCACCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: DKQDEWAFLHYRTLTPGIRPAPC*CAPPAQ
Trigger: CTGGGCTGGTGGTGCACAGCAGCATGGAGCAGGACG...GATGCCGGGGGTGAGTGTCCTGTAGTGTAGAAACGCCCACTCATCCTGCTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp CCAGGCTGTACAGACCTGGTGAGGGGATGTCAGAGACTTTATTGCCGTCCTGCCGAGGTCGGCCCTGTATaGCAGCCTGCACAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: PGCTDLVRGCQRLYCRPAEVGPV*QPAQLR
Trigger: ACGGAGCTGTGCAGGCTGGCATACAGGGCCGACCTC...GGCAGGACGGCAATAAAGTCTCTGACATCCCCTCACCAGGTCTGTACAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp AGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGTGGGGAGGCGGGTCCACTTTATTGCCGTCCTaGCCAACAAAGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SVKLPGVSGATPLWGGGSTLLPS*PTKAFR
Trigger: CCTGAAGGCCTTTGTTGGGCAGGACGGCAATAAAGT...GGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GCCTGGAGGGAGGCAGCCCCCATGCTCCTCACACCCAGCAAGAAGGGGTCAGGGTGTCAGAGACTTTATTaGCGTCCTGCCCAACAAAGG +
Preference number: 4 (lower is better)
Translates to: AWREAAPMLLTPSKKGSGCQRLY*RPAQQR
Trigger: CCTTTGTTGGGCAGGACGGCAATAAAGTCTCTGACA...CCCTGACCCCTTCTTGCTGGGTGTGAGGAGCATGGGGGCTGCCTCCCTCCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCGGCCAGCTTGACAAATaGTCTCTGCGGGACAAGCAG +
Preference number: 4 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVGQLDK*SLRDKQ
Trigger: CTGCTTGTCCCGCAGAGAGCATTTGTCAAGCTGGCC...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GCCCAGGCACACCTGTGTCGGGGTGAGGACAGCAAGGATGCCAGCGGCAGTACCAAACCCACTCAGCGATaGTCATGTCACTGGAGTCGA +
Preference number: 4 (lower is better)
Translates to: AQAHLCRGEDSKDASGSTKPTQR*SCHWSR
Trigger: TCGACTCCAGTGACATGACCATCGCTGAGTGGGTTT...GGTACTGCCGCTGGCATCCTTGCTGTCCTCACCCCGACACAGGTGTGCCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TTGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTTGCCTCTTGATGGTCTaGGCAAGGCAAACCCACTCA +
Preference number: 4 (lower is better)
Translates to: LDGLPSPRWLPCPASKGTCLLMV*ARQTHS
Trigger: TGAGTGGGTTTGCCTTGCCCAGACCATCAAGAGGCA...AGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGGACGGGGAGAAGGTGACAAGGCCCCCTGGAGGCAGTaGGTACAGTTGACGATGACC +
Preference number: 4 (lower is better)
Translates to: PCPASKGTDERGRGEGDKAPWRQ*VQLTMT
Trigger: GGTCATCGTCAACTGTACCCACTGCCTCCAGGGGGC...CTTGTCACCTTCTCCCCGTCCTCTCTCGTCAGTTCCCTTGGATGCTGGACACGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GACAAGCAGGATGAGTGGGCGTTTCTACACTACAGGACACTCACCCCCGGCATCAGGGCATCTGCCTCCTaGCTGCCGCTCAGACTGAGG +
Preference number: 4 (lower is better)
Translates to: DKQDEWAFLHYRTLTPGIRASAS*LPLRLR
Trigger: CCTCAGTCTGAGCGGCAGCCAGGAGGCAGATGCCCT...GATGCCGGGGGTGAGTGTCCTGTAGTGTAGAAACGCCCACTCATCCTGCTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TCTGGTCTAGCCCAGTCCTGGGCAGACTCTTCCCGACGCACAGCCACTTGGATGGCGTGCAGTGGGGTTTaGCCGTTAAAGTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: SGLAQSWADSSRRTATWMACSGV*PLKSTR
Trigger: CCTGGTGGACTTTAACGGCCAAACCCCACTGCACGC...CATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TTGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTCCCTCCAGCAGGTCATaGGAGGAAGGAATGGCTTAT +
Preference number: 4 (lower is better)
Translates to: LDGLPSPRWLPCPASKGTPSSRS*EEGMAY
Trigger: ATAAGCCATTCCTTCCTCCCATGACCTGCTGGAGGG...AGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp ATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCACTGAGTAACCGAAGGTCTCCATaGCCACGCCCTTCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: MWANVSHLQLSQPGAALSNRRSP*PRPSGE
Trigger: CTCCCCTGAAGGGCGTGGTCATGGAGACCTTCGGTT...ACTCAGTGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp TCTGGTCTAGCCCAGTCCTGGGCAGACTCTTCCCGACGCACAGCCACTTGGATGAGGACGGGGAGAAGGTaGCAAGTACAAGCACCTGCA +
Preference number: 4 (lower is better)
Translates to: SGLAQSWADSSRRTATWMRTGRR*QVQAPA
Trigger: TGCAGGTGCTTGTACTTGTCACCTTCTCCCCGTCCT...CATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp ATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCACTGAGTAGAGAATCCTCTGGTTaGGGCTGGCCGGGGGTAGCA +
Preference number: 4 (lower is better)
Translates to: MWANVSHLQLSQPGAALSRESSG*GWPGVA
Trigger: TGCTACCCCCGGCCAGCCGCAACCAGAGGATTCTCT...ACTCAGTGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TTGGATGGGCTCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTCATGGGAGGAAGGAATaGCTTATACTGCAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LDGLPSPRWLPCPASKGTHGRKE*LILQQD
Trigger: GTCCTGCTGCAGTATAAGCCATTCCTTCCTCCCATG...AGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGAGCCCATCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp ATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCACTGAGTTGGCCTGGCTCACGGTaGAGGCTGCATCAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: MWANVSHLQLSQPGAALSWPGSR*RLHQEL
Trigger: AAGCTCCTGATGCAGCCTCCACCGTGAGCCAGGCCA...ACTCAGTGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp ACGAACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCGACAAGCAGGATGAGTaGGCGTTTCTACACTACAGG +
Preference number: 4 (lower is better)
Translates to: TNAPSLSVPAVPTARQRADKQDE*AFLHYR
Trigger: CCTGTAGTGTAGAAACGCCCACTCATCCTGCTTGTC...GGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGTTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp CCAGGCTGTACAGACCTGGTGAGGGGATGTCAGAGACTTTATTGCCGTCCTGCCGATTTCAGCCCCAGCTaGAAGAAGGCACGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PGCTDLVRGCQRLYCRPADFSPS*KKARGC
Trigger: GCAGCCTCGTGCCTTCTTTCAGCTGGGGCTGAAATC...GGCAGGACGGCAATAAAGTCTCTGACATCCCCTCACCAGGTCTGTACAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CCAGGCTGTACAGACCTGGTGAGGGGATGTCAGAGACTTTATTGCCGTCCTGCCGCGTGCTCCTCGTCATaGAACATGGGCAGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: PGCTDLVRGCQRLYCRPAACSSS*NMGSVL
Trigger: GAGGACACTGCCCATGTTCCATGACGAGGAGCACGC...GGCAGGACGGCAATAAAGTCTCTGACATCCCCTCACCAGGTCTGTACAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp TTCGCCATGTTGGCTGTTCTCAAACTCCTAGGCTCAAGCTATCCACCCGCCTCGGCACATACGATAGCTTaGCCAGGGCGGCCTCCGATG +
Preference number: 4 (lower is better)
Translates to: FAMLAVLKLLGSSYPPASAHTIA*PGRPPM
Trigger: CATCGGAGGCCGCCCTGGCCAAGCTATCGTATGTGC...CGAGGCGGGTGGATAGCTTGAGCCTAGGAGTTTGAGAACAGCCAACATGGCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CCAGGCTGTACAGACCTGGTGAGGGGATGTCAGAGACTTTATTGCCGTCCTGCCTCTACACTGGCAGGTTaGCACCTGCTCTGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: PGCTDLVRGCQRLYCRPASTLAG*HLLWEG
Trigger: ACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGA...GGCAGGACGGCAATAAAGTCTCTGACATCCCCTCACCAGGTCTGTACAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp AGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTGCATACACGAGAAATCTaGTTACCTCCAGCTGGGGAA +
Preference number: 4 (lower is better)
Translates to: RSKGFPGPATLAWRHLVVHTREI*LPPAGE
Trigger: TTCCCCAGCTGGAGGTAACCAGATTTCTCGTGTATG...CACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp ATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCACTGAGTCCTTCAGGCTTTACATaGGAGCAGGCTGGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: MWANVSHLQLSQPGAALSPSGFT*EQAGKQ
Trigger: CTGCTTCCCAGCCTGCTCTCATGTAAAGCCTGAAGG...ACTCAGTGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp CTTACAGGGTGGCCTGGCTCACGGTGGAGGCTGCATCAGGAGCTTCAGGCAGAGGGAAATATTGAGGTGTaGCCAGAAGGGGAACTTCCT +
Preference number: 4 (lower is better)
Translates to: LTGWPGSRWRLHQELQAEGNIEV*PEGELP
Trigger: AGGAAGTTCCCCTTCTGGTCACACCTCAATATTTCC...CTCTGCCTGAAGCTCCTGATGCAGCCTCCACCGTGAGCCAGGCCACCCTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp TGCCACGCTCGCATGGCGTCACCTTGTTGTGCAAGGCCCAGGCACACCTGTGTCAGGATGACAGTCTTCTaGAGGTTCTCCAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: CHARMASPCCARPRHTCVRMTVF*RFSSMK
Trigger: CTTCATGCTGGAGAACCTGCAGAAGACTGTCATCCT...GACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp TTCGCCATGTTGGCTGTTCTCAAACTCCTAGGCTCAAGCTATCCACCCGCCTCGAGCGTCTACCTTGGTTaGCCGGTTGCCCCGAAACAG +
Preference number: 4 (lower is better)
Translates to: FAMLAVLKLLGSSYPPASSVYLG*PVAPKQ
Trigger: CTGTTTCGGGGCAACCGGGCAACCAAGGTAGACGCT...CGAGGCGGGTGGATAGCTTGAGCCTAGGAGTTTGAGAACAGCCAACATGGCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR GCA 90 bp TTCGCCATGTTGGCTGTTCTCAAACTCCTAGGCTCAAGCTATCCACCCGCCTCGACGTCCACACCTCTCTaGAGCAGCATGGTGACTGCC +
Preference number: 4 (lower is better)
Translates to: FAMLAVLKLLGSSYPPASTSTPL*SSMVTA
Trigger: GGCAGTCACCATGCTGCTGCAGAGAGGTGTGGACGT...CGAGGCGGGTGGATAGCTTGAGCCTAGGAGTTTGAGAACAGCCAACATGGCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CCAGGCTGTACAGACCTGGTGAGGGGATGTCAGAGACTTTATTGCCGTCCTGCCTCGGTGTGTCTACACTaGCAGGTTGGCACCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGCTDLVRGCQRLYCRPASVCLH*QVGTCS
Trigger: AGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGA...GGCAGGACGGCAATAAAGTCTCTGACATCCCCTCACCAGGTCTGTACAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CGGCATCAGTCGGTGTGTCTACACTGGCAGGTTGGCACCTGCTCTGGGAGGGTGCTTAATTCTAAGTTCTaGTCTAGCCCAGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RHQSVCLHWQVGTCSGRVLNSKF*SSPVLG
Trigger: GCCCAGGACTGGGCTAGACCAGAACTTAGAATTAAG...CACCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGACACACCGACTGATGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR TCA 90 bp CCAAGGGAACTGACGAGAGAGGACGGGGAGAAGGTGACAAGTACAAGCACCTGCGCAGCGATACTGGGGTaGCAGAAAACCAGACAGCAA +
Preference number: 4 (lower is better)
Translates to: PRELTREDGEKVTSTSTCAAILG*QKTRQQ
Trigger: TTGCTGTCTGGTTTTCTGTCACCCCAGTATCGCTGC...GCAGGTGCTTGTACTTGTCACCTTCTCCCCGTCCTCTCTCGTCAGTTCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp GACAAGCAGGATGAGTGGGCGTTTCTACACTACAGGACACTCACCCCCGGCATCGAAAAGGCAGACCTCTaGGATCACATACTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: DKQDEWAFLHYRTLTPGIEKADL*DHILAS
Trigger: GCTGGCCAGTATGTGATCCCAGAGGTCTGCCTTTTC...GATGCCGGGGGTGAGTGTCCTGTAGTGTAGAAACGCCCACTCATCCTGCTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CCA 90 bp CCAAGGGAACTGACGAGAGAGGACGGGGAGAAGGTGACAAGTACAAGCACCTGCACCTCCTGCCACTTCTaGGTGATTCTAGAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PRELTREDGEKVTSTSTCTSCHF*VILEES
Trigger: GGACTCCTCTAGAATCACCCAGAAGTGGCAGGAGGT...GCAGGTGCTTGTACTTGTCACCTTCTCCCCGTCCTCTCTCGTCAGTTCCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 72 bp CTGTACAGACCTGGTGAGGGGATGTCAGAGACTTTATaGCCGTCCTGCCCAACAAAGGCCTTCAGGCTTTAC +
Preference number: 4 (lower is better)
Translates to: LYRPGEGMSETL*PSCPTKAFRLY
Trigger: GTAAAGCCTGAAGGCCTTTGTTGGGCAGGACGGCAATAAAGTCTCTGACATCCCCTCACCAGGTCTGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
3UTR CAA 72 bp ACAAGCACCTGCAGTTCCCACCAGCAGCAGGAAATATaGAGGTGTGACCAGAAGGGGAACTTCCTAGCATAC +
Preference number: 4 (lower is better)
Translates to: TSTCSSHQQQEI*RCDQKGNFLAY
Trigger: GTATGCTAGGAAGTTCCCCTTCTGGTCACACCTCAATATTTCCTGCTGCTGGTGGGAACTGCAGGTGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS CCA 90 bp GGCCCGTCCCGGGCACAAGCACGCCGAGCTCACTCCGCATGCCAATaGTGCCGCCGGTGTAGACGGCCAGCAGCCTCCGCTCGGGCCCCA +
Preference number: 5 (lower is better)
Translates to: GPSRAQARRAHSACQ*CRRCRRPAASARAP
Trigger: TGGGGCCCGAGCGGAGGCTGCTGGCCGTCTACACCGGCGGCACCATTGGCATGCGGAGTGAGCTCGGCGTGCTTGTGCCCGGGACGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS CCA 90 bp CTGCCCAGCTCCACAAGCGCCTGCAGCGCCTCCACGTCACCGGCGTaGGCAGCAGCACAGGCCAGGCTGGGCACCAGGGCATTCCGCAGG +
Preference number: 5 (lower is better)
Translates to: LPSSTSACSASTSPA*AAAQARLGTRAFRR
Trigger: CCTGCGGAATGCCCTGGTGCCCAGCCTGGCCTGTGCTGCTGCCCACGCCGGTGACGTGGAGGCGCTGCAGGCGCTTGTGGAGCTGGGCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000549809.5
ENST00000551177.6
CDS-3UTR CAA 90 bp GCCCCACCGCCTCTCCCAAGGCCCTCCAAGGGTCTCGGCCATCCGGGGACAGCAGGCACGAGGCTGCCCTaGGCCTTGGAGCACCACCCC +
Preference number: 5 (lower is better)
Translates to: APPPLPRPSKGLGHPGTAGTRLP*ALEHHP
Trigger: GGGGTGGTGCTCCAAGGCCAAGGGCAGCCTCGTGCC...TGCTGTCCCCGGATGGCCGAGACCCTTGGAGGGCCTTGGGAGAGGCGGTGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS GCA 90 bp ATGGCTCACGTGGGCCTGGCCAGCAGTGCCCAGCCTCAGGATCGGTaGCCCTCAGCAGCCATGCCCTGTCCGGGACTGGGAGGAGCCCAC +
Preference number: 5 (lower is better)
Translates to: MAHVGLASSAQPQDR*PSAAMPCPGLGGAH
Trigger: GTGGGCTCCTCCCAGTCCCGGACAGGGCATGGCTGCTGAGGGGCACCGATCCTGAGGCTGGGCACTGCTGGCCAGGCCCACGTGAGCCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548372.5
CDS GCA 90 bp CTCAGACTGAGGAGCCAGGAGACCCCACCGCCCAGCGTGTTGCCCTaGAGTGAGGGCCGGCGCTCTTCCACCGAGGGTGGCGTCATCTCC +
Preference number: 5 (lower is better)
Translates to: LRLRSQETPPPSVLP*SEGRRSSTEGGVIS
Trigger: GGAGATGACGCCACCCTCGGTGGAAGAGCGCCGGCCCTCACTGCAGGGCAACACGCTGGGCGGTGGGGTCTCCTGGCTCCTCAGTCTGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000549809.5
ENST00000551177.6
ENST00000552126.1
CDS-3UTR CAA 90 bp GCCCCACCGCCTCTCCCAAGGCCCTCCAAGGGTCTCGGCCATCCGGGGACAGCAACCTGCACCAGGCATTaGTCCAGATGCCCCACCGCC +
Preference number: 5 (lower is better)
Translates to: APPPLPRPSKGLGHPGTATCTRH*SRCPTA
Trigger: GGCGGTGGGGCATCTGGACAAATGCCTGGTGCAGGT...TGCTGTCCCCGGATGGCCGAGACCCTTGGAGGGCCTTGGGAGAGGCGGTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS GCA 90 bp GGGGGTAGCACCAGGGTGTCCTCAGAGAGGCCGCGGGCTCGGGCGTaGTCCTCGTCATGGAACATGGGCAGTGTCCTCAGGATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GGSTRVSSERPRARA*SSSWNMGSVLRMAA
Trigger: GGCTGCCATCCTGAGGACACTGCCCATGTTCCATGACGAGGAGCACGCCCGAGCCCGCGGCCTCTCTGAGGACACCCTGGTGCTACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546892.6
ENST00000551177.6
CDS GCA 90 bp CAGTTGACGATGACCAGGCCGCGCTCGGTGGCCACCCGCAGCTCCTaGAGCAGGTCGGGCTTGGTGGGTCCGTTCCCTGAACCGAAGGTC +
Preference number: 5 (lower is better)
Translates to: QLTMTRPRSVATRSS*SRSGLVGPFPEPKV
Trigger: GACCTTCGGTTCAGGGAACGGACCCACCAAGCCCGACCTGCTGCAGGAGCTGCGGGTGGCCACCGAGCGCGGCCTGGTCATCGTCAACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS GCA 90 bp GTCCCGGGTGTTCACGTCCACACCTCTCTGCAGCAGCATGGTGACTaGCTCTGTGTGGCCTCCCCGGGCGGCCGCGTGCAGTGGGGTTTG +
Preference number: 5 (lower is better)
Translates to: VPGVHVHTSLQQHGD*LCVASPGGRVQWGL
Trigger: CAAACCCCACTGCACGCGGCCGCCCGGGGAGGCCACACAGAGGCAGTCACCATGCTGCTGCAGAGAGGTGTGGACGTGAACACCCGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546892.6
ENST00000551177.6
CDS CCA 90 bp CTCGGGCGTGCTCCTCGTCATGGAACATGGGCAGTGTCCTCAGGATaGCAGCCAGGCCCGTCCCGGGCACAAGCACGCCGAGCTCACTCC +
Preference number: 5 (lower is better)
Translates to: LGRAPRHGTWAVSSG*QPGPSRAQARRAHS
Trigger: GGAGTGAGCTCGGCGTGCTTGTGCCCGGGACGGGCCTGGCTGCCATCCTGAGGACACTGCCCATGTTCCATGACGAGGAGCACGCCCGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS CCA 90 bp GGCAGGAGAGGATGCTTGCAGGAGGCTCGCCTGTGGCGGCTGTGGTaGTCAGCCACCACGAGGGCAACTCCCAGCTCACCCCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: GRRGCLQEARLWRLW*SATTRATPSSPPAV
Trigger: CACAGCTGGGGGTGAGCTGGGAGTTGCCCTCGTGGTGGCTGACCACCACAGCCGCCACAGGCGAGCCTCCTGCAAGCATCCTCTCCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548372.5
CDS-3UTR CAA 90 bp GCCTGGAGGGAGGCAGCCCCCATGCTCCTCACACCCAGCAAGAAGGGGTCAGGGATGCTCATCCAGGGGTaGGAGGGCTGCCTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: AWREAAPMLLTPSKKGSGMLIQG*EGCLGE
Trigger: CTCCCCCAGGCAGCCCTCCAACCCCTGGATGAGCAT...CCCTGACCCCTTCTTGCTGGGTGTGAGGAGCATGGGGGCTGCCTCCCTCCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CAA 90 bp ACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCAGAGCCGACGCACAGCCACTaGGATGGGCTCCCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: TLQACLSRLFPLHAREPEPTHSH*DGLPSP
Trigger: GGGCGAGGGGAGCCCATCCAAGTGGCTGTGCGTCGG...CTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS GCA 90 bp AGCAGCATGGTGACTGCCTCTGTGTGGCCTCCCCGGGCGGCCGCGTaGAGTGGGGTTTGGCCGTTAAAGTCCACCAGGCCCAGGTCACTG +
Preference number: 5 (lower is better)
Translates to: SSMVTASVWPPRAAA*SGVWPLKSTRPRSL
Trigger: CAGTGACCTGGGCCTGGTGGACTTTAACGGCCAAACCCCACTGCACGCGGCCGCCCGGGGAGGCCACACAGAGGCAGTCACCATGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546892.6
ENST00000551177.6
CDS GCA 90 bp CACGGTAGCACCAGGGTGTCCTCAGAGAGGCCGCGGGCTCGGGCGTaGTCCTCGTCATGGAACATGGGCAGTGTCCTCAGGATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: HGSTRVSSERPRARA*SSSWNMGSVLRMAA
Trigger: GGCTGCCATCCTGAGGACACTGCCCATGTTCCATGACGAGGAGCACGCCCGAGCCCGCGGCCTCTCTGAGGACACCCTGGTGCTACCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548372.5
CDS CCA 90 bp GGGGCTGGCACTCCAGCACGGTGTAGAGAATCCTCTGGTTGCGGCTaGCCGGGCTGCGGGACAGAAACAGCAGGAGGCGGAACAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GAGTPARCRESSGCG*PGCGTETAGGGTAG
Trigger: GCCTGCTGTTCCGCCTCCTGCTGTTTCTGTCCCGCAGCCCGGCCAGCCGCAACCAGAGGATTCTCTACACCGTGCTGGAGTGCCAGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548372.5
CDS-3UTR CAA 90 bp AGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGTGGGGAGGCGGGTCCCTCCGAGCGTCTACCTaGGTTGCCCGGTTGCCCCGA +
Preference number: 5 (lower is better)
Translates to: SVKLPGVSGATPLWGGGSLRAST*VARLPR
Trigger: TCGGGGCAACCGGGCAACCAAGGTAGACGCTCGGAG...GGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS TCA 90 bp GCAGGTCGGGCTTGGTGGGTCCGTTCCCTGAACCGAAGGTCTCCATaGCCACGCCCTTCAGGGGAGGCTGCAAGAAGGCCCGAACCAGGG +
Preference number: 5 (lower is better)
Translates to: AGRAWWVRSLNRRSP*PRPSGEAARRPEPG
Trigger: CCCTGGTTCGGGCCTTCTTGCAGCCTCCCCTGAAGGGCGTGGTCATGGAGACCTTCGGTTCAGGGAACGGACCCACCAAGCCCGACCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS TCA 90 bp CACCCGCAGCTCCTGCAGCAGGTCGGGCTTGGTGGGTCCGTTCCCTaGACCGAAGGTCTCCATGACCACGCCCTTCAGGGGAGGCTGCAA +
Preference number: 5 (lower is better)
Translates to: HPQLLQQVGLGGSVP*TEGLHDHALQGRLQ
Trigger: TTGCAGCCTCCCCTGAAGGGCGTGGTCATGGAGACCTTCGGTTCAGGGAACGGACCCACCAAGCCCGACCTGCTGCAGGAGCTGCGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS CCA 90 bp AGCCTCAGGATCGGTGCCCCTCAGCAGCCATGCCCTGTCCGGGACTaGGAGGAGCCCACACTCACGGTAGCACCAGGGTGTCCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: SLRIGAPQQPCPVRD*EEPTLTVAPGCPQR
Trigger: TCTCTGAGGACACCCTGGTGCTACCGTGAGTGTGGGCTCCTCCCAGTCCCGGACAGGGCATGGCTGCTGAGGGGCACCGATCCTGAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548372.5
CDS-3UTR CAA 90 bp GCTGCCATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCAAGGCTGCCCTTGGCCTaGGAGCACCACCCCCACCGG +
Preference number: 5 (lower is better)
Translates to: AAMWANVSHLQLSQPGAARLPLA*EHHPHR
Trigger: CCGGTGGGGGTGGTGCTCCAAGGCCAAGGGCAGCCT...TGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACATGGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS GCA 90 bp ACTCCAGCACGGTGTAGAGAATCCTCTGGTTGCGGCTGGCCGGGCTaGGGGACAGAAACAGCAGGAGGCGGAACAGCAGGCTCCCGCTCT +
Preference number: 5 (lower is better)
Translates to: TPARCRESSGCGWPG*GTETAGGGTAGSRS
Trigger: AGAGCGGGAGCCTGCTGTTCCGCCTCCTGCTGTTTCTGTCCCGCAGCCCGGCCAGCCGCAACCAGAGGATTCTCTACACCGTGCTGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548372.5
CDS-3UTR CAA 90 bp AGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTGTGCAGCAGGTCGGGCTaGGTGGGTCCGTTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: RSKGFPGPATLAWRHLVVCSRSG*VGPFPE
Trigger: TTCAGGGAACGGACCCACCAAGCCCGACCTGCTGCA...CACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CAA 90 bp AGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGTGGGGAGGCGGGTCCCGCGTGCAGTGGGGTTaGGCCGTTAAAGTCCACCAG +
Preference number: 5 (lower is better)
Translates to: SVKLPGVSGATPLWGGGSRVQWG*AVKVHQ
Trigger: CTGGTGGACTTTAACGGCCAAACCCCACTGCACGCG...GGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS GCA 90 bp AACAGCAGGAGGCGGAACAGCAGGCTCCCGCTCTGCACCTCCTCCTaGTCTAAATGCCCTGACCCGCTCTGTTCCCCTCTGGCAGAGCTG +
Preference number: 5 (lower is better)
Translates to: NSRRRNSRLPLCTSS*SKCPDPLCSPLAEL
Trigger: CAGCTCTGCCAGAGGGGAACAGAGCGGGTCAGGGCATTTAGAGCAGGAGGAGGTGCAGAGCGGGAGCCTGCTGTTCCGCCTCCTGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548372.5
CDS GCA 90 bp CTGCGGGACAGAAACAGCAGGAGGCGGAACAGCAGGCTCCCGCTCTaGACCTCCTCCTGCTCTAAATGCCCTGACCCGCTCTGTTCCCCT +
Preference number: 5 (lower is better)
Translates to: LRDRNSRRRNSRLPL*TSSCSKCPDPLCSP
Trigger: AGGGGAACAGAGCGGGTCAGGGCATTTAGAGCAGGAGGAGGTGCAGAGCGGGAGCCTGCTGTTCCGCCTCCTGCTGTTTCTGTCCCGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548372.5
CDS CCA 90 bp TCCTTGGTCAGCAGCTCCTTCCTGACATCCAGGCTCAGCCCTGGCTaGCCCAGCACATACGATAGCTTGGCCAGGGCGGCCTCCGATGTC +
Preference number: 5 (lower is better)
Translates to: SLVSSSFLTSRLSPG*PSTYDSLARAASDV
Trigger: GACATCGGAGGCCGCCCTGGCCAAGCTATCGTATGTGCTGGGCCAGCCAGGGCTGAGCCTGGATGTCAGGAAGGAGCTGCTGACCAAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS-3UTR CAA 90 bp TCCCCTCGCCCAGGTGGCTCCCGTGTCCAGCATCCAAGGGAACTGACGAGAGAGGAGCGTCTACCTTGGTaGCCCGGTTGCCCCGAAACA +
Preference number: 5 (lower is better)
Translates to: SPRPGGSRVQHPRELTREERLPW*PGCPET
Trigger: TGTTTCGGGGCAACCGGGCAACCAAGGTAGACGCTC...CTCTCTCGTCAGTTCCCTTGGATGCTGGACACGGGAGCCACCTGGGCGAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CAA 90 bp CCTCCACCTGCAGCCCCTCATGGGCCTCACCAGGGTGAGGAGCAAAGGCTTCCCCGCACCAGCTCCCTGTaGATTGTGATGTCAGCACCC +
Preference number: 5 (lower is better)
Translates to: PPPAAPHGPHQGEEQRLPRTSSL*IVMSAP
Trigger: GGGTGCTGACATCACAATCAACAGGGAGCTGGTGCG...GGGAAGCCTTTGCTCCTCACCCTGGTGAGGCCCATGAGGGGCTGCAGGTGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CAA 90 bp TGCCACGCTCGCATGGCGTCACCTTGTTGTGCAAGGCCCAGGCACACCTGTGTCAGGCAGTGGGTACAGTaGACGATGACCAGGCCGCGC +
Preference number: 5 (lower is better)
Translates to: CHARMASPCCARPRHTCVRQWVQ*TMTRPR
Trigger: GCGCGGCCTGGTCATCGTCAACTGTACCCACTGCCT...GACACAGGTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGAGCGTGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CAA 90 bp ACGCTCCAAGCCTGTCTGTCCCGGCTGTTCCCACTGCACGCCAGAGAGCCAGAGCATGGCGTCACCTTGTaGTGCAAGGCCCAGGCACAC +
Preference number: 5 (lower is better)
Translates to: TLQACLSRLFPLHAREPEHGVTL*CKAQAH
Trigger: GTGTGCCTGGGCCTTGCACAACAAGGTGACGCCATG...CTCTGGCTCTCTGGCGTGCAGTGGGAACAGCCGGGACAGACAGGCTTGGAGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CAA 90 bp AGGAGCAAAGGCTTCCCCGGCCCTGCCACGCTCGCATGGCGTCACCTTGTTGTGTCGCATGGCGTCACCTaGTTGTGCAAGGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: RSKGFPGPATLAWRHLVVSHGVT*LCKAQA
Trigger: TGCCTGGGCCTTGCACAACAAGGTGACGCCATGCGA...CACAACAAGGTGACGCCATGCGAGCGTGGCAGGGCCGGGGAAGCCTTTGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS GCA 90 bp CTTGGTCAGCAGCTCTGGGATCACATACTGGCCAGCCATGAGCAGTaGCCCCAGCAGGTTCTCACGGCCGTCGCTCCACAGGGCATGGAT +
Preference number: 5 (lower is better)
Translates to: LGQQLWDHILASHEQ*PQQVLTAVAPQGMD
Trigger: ATCCATGCCCTGTGGAGCGACGGCCGTGAGAACCTGCTGGGGGCACTGCTCATGGCTGGCCAGTATGTGATCCCAGAGCTGCTGACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551170.1
CDS-3UTR CAA 90 bp GCCCCACCGCCTCTCCCAAGGCCCTCCAAGGGTCTCGGCCATCCGGGGACAGCAATGTCAGAGACTTTATaGCCGTCCTGCCCAACAAAG +
Preference number: 5 (lower is better)
Translates to: APPPLPRPSKGLGHPGTAMSETL*PSCPTK
Trigger: CTTTGTTGGGCAGGACGGCAATAAAGTCTCTGACAT...TGCTGTCCCCGGATGGCCGAGACCCTTGGAGGGCCTTGGGAGAGGCGGTGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CAA 90 bp TCTGGTCTAGCCCAGTCCTGGGCAGACTCTTCCCGACGCACAGCCACTTGGATGGTCTACACTGGCAGGTaGGCACCTGCTCTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: SGLAQSWADSSRRTATWMVYTGR*APALGG
Trigger: CCCTCCCAGAGCAGGTGCCAACCTGCCAGTGTAGAC...CATCCAAGTGGCTGTGCGTCGGGAAGAGTCTGCCCAGGACTGGGCTAGACCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS GCA 90 bp GAAAAGGCAGACCTCTGGGATCACATACTGGCCAGCCATGAGCAGTaGCCCCAGCAGGTTCTCACGGCCGTCGCTCCACAGGGCATGGAT +
Preference number: 5 (lower is better)
Translates to: EKADLWDHILASHEQ*PQQVLTAVAPQGMD
Trigger: ATCCATGCCCTGTGGAGCGACGGCCGTGAGAACCTGCTGGGGGCACTGCTCATGGCTGGCCAGTATGTGATCCCAGAGGTCTGCCTTTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS-3UTR CAA 90 bp GGGACGAAACACACCAACGCGGCGCAGGACACGAACGCTCCAAGCCTGTCTGTCCTGGGAAAGGACCACTaGGCCAAGTCACGTCCATGC +
Preference number: 5 (lower is better)
Translates to: GTKHTNAAQDTNAPSLSVLGKDH*AKSRPC
Trigger: GCATGGACGTGACTTGGCCAAGTGGTCCTTTCCCAG...GACAGACAGGCTTGGAGCGTTCGTGTCCTGCGCCGCGTTGGTGTGTTTCGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CAA 90 bp AGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTGTGGGGAGGCGGGTCCCAGCAGCAGGAAATATaGAGGTGTGACCAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: SVKLPGVSGATPLWGGGSQQQEI*RCDQKG
Trigger: CCCCTTCTGGTCACACCTCAATATTTCCTGCTGCTG...GGACCCGCCTCCCCACAGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CAA 90 bp AACCAAGGCCTCCCCCAGCGTGAAATTACCAGGTGTGAGCGGCGCCACCCCACTCCATCAGTGACCCAGTaGGAGAAAGGCCAGCTTGAC +
Preference number: 5 (lower is better)
Translates to: NQGLPQREITRCERRHPTPSVTQ*EKGQLD
Trigger: GTCAAGCTGGCCTTTCTCCAACTGGGTCACTGATGG...AGTGGGGTGGCGCCGCTCACACCTGGTAATTTCACGCTGGGGGAGGCCTTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CAA 90 bp GACAAGCAGGATGAGTGGGCGTTTCTACACTACAGGACACTCACCCCCGGCATCAGCACATACGATAGCTaGGCCAGGGCGGCCTCCGAT +
Preference number: 5 (lower is better)
Translates to: DKQDEWAFLHYRTLTPGISTYDS*ARAASD
Trigger: ATCGGAGGCCGCCCTGGCCAAGCTATCGTATGTGCT...GATGCCGGGGGTGAGTGTCCTGTAGTGTAGAAACGCCCACTCATCCTGCTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CAA 90 bp GCCCAGGCACACCTGTGTCGGGGTGAGGACAGCAAGGATGCCAGCGGCAGTACCCAGAGTTTCGCCATGTaGGCTGTTCTCAAACTCCTA +
Preference number: 5 (lower is better)
Translates to: AQAHLCRGEDSKDASGSTQSFAM*AVLKLL
Trigger: TAGGAGTTTGAGAACAGCCAACATGGCGAAACTCTG...GGTACTGCCGCTGGCATCCTTGCTGTCCTCACCCCGACACAGGTGTGCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS-3UTR CAA 90 bp CCAAGGGAACTGACGAGAGAGGACGGGGAGAAGGTGACAAGTACAAGCACCTGCACATCCCACGAGGGTTaGGAGGGGACTGACAATGGG +
Preference number: 5 (lower is better)
Translates to: PRELTREDGEKVTSTSTCTSHEG*EGTDNG
Trigger: CCCATTGTCAGTCCCCTCCAAACCCTCGTGGGATGT...GCAGGTGCTTGTACTTGTCACCTTCTCCCCGTCCTCTCTCGTCAGTTCCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS GCA 90 bp AGCAGAAAGCTGCGAACCTCCGAGCGTCTACCTTGGTTGCCCGGTTaGCCCGAAACAGCTGATTCTGGAAGAAAAGGCAGACCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: SRKLRTSERLPWLPG*PETADSGRKGRPLG
Trigger: TCCCAGAGGTCTGCCTTTTCTTCCAGAATCAGCTGTTTCGGGGCAACCGGGCAACCAAGGTAGACGCTCGGAGGTTCGCAGCTTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS-3UTR CAA 90 bp ATGTGGGCTAACGTGAGCCACCTGCAGCTTTCACAACCCGGAGCAGCACTGAGTTGGAGAAAGGCCAGCTaGACAAATGCTCTCTGCGGG +
Preference number: 5 (lower is better)
Translates to: MWANVSHLQLSQPGAALSWRKAS*TNALCG
Trigger: CCCGCAGAGAGCATTTGTCAAGCTGGCCTTTCTCCA...ACTCAGTGCTGCTCCGGGTTGTGAAAGCTGCAGGTGGCTCACGTTAGCCCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551177.6
CDS CAA 90 bp CTGCCGCTCAGACTGAGGAGCCAGGAGACCCCACCGCCCAGCGTGTaGCCCTGCAGTGAGGGCCGGCGCTCTTCCACCGAGGGTGGCGTC +
Preference number: 6 (lower is better)
Translates to: LPLRLRSQETPPPSV*PCSEGRRSSTEGGV
Trigger: GACGCCACCCTCGGTGGAAGAGCGCCGGCCCTCACTGCAGGGCAACACGCTGGGCGGTGGGGTCTCCTGGCTCCTCAGTCTGAGCGGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000549809.5
ENST00000551177.6
ENST00000552126.1
CDS TCA 72 bp CCAGGAGACCCCACCGCCCAGCGTGTTGCCCTGCAGTaGGGGCCGGCGCTCTTCCACCGAGGGTGGCGTCAT +
Preference number: 6 (lower is better)
Translates to: PGDPTAQRVALQ*GPALFHRGWRH
Trigger: ATGACGCCACCCTCGGTGGAAGAGCGCCGGCCCTCACTGCAGGGCAACACGCTGGGCGGTGGGGTCTCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000549809.5
ENST00000551177.6
ENST00000552126.1
CDS GCA 72 bp CCGTCCCGGGCACAAGCACGCCGAGCTCACTCCGCATaGCAATGGTGCCGCCGGTGTAGACGGCCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: PSRAQARRAHSA*QWCRRCRRPAA
Trigger: GGCTGCTGGCCGTCTACACCGGCGGCACCATTGGCATGCGGAGTGAGCTCGGCGTGCTTGTGCCCGGGACGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS CAA 90 bp AGGCCGCGCTCGGTGGCCACCCGCAGCTCCTGCAGCAGGTCGGGCTaGGTGGGTCCGTTCCCTGAACCGAAGGTCTCCATGACCACGCCC +
Preference number: 6 (lower is better)
Translates to: RPRSVATRSSCSRSG*VGPFPEPKVSMTTP
Trigger: GGGCGTGGTCATGGAGACCTTCGGTTCAGGGAACGGACCCACCAAGCCCGACCTGCTGCAGGAGCTGCGGGTGGCCACCGAGCGCGGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS GCA 72 bp GTGACTGCCTCTGTGTGGCCTCCCCGGGCGGCCGCGTaGAGTGGGGTTTGGCCGTTAAAGTCCACCAGGCCC +
Preference number: 6 (lower is better)
Translates to: VTASVWPPRAAA*SGVWPLKSTRP
Trigger: GGGCCTGGTGGACTTTAACGGCCAAACCCCACTGCACGCGGCCGCCCGGGGAGGCCACACAGAGGCAGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546892.6
ENST00000551177.6
CDS CCA 72 bp CGGGCACAAGCACGCCGAGCTCACTCCGCATGCCAATaGTGCCGCCGGTGTAGACGGCCAGCAGCCTCCGCT +
Preference number: 6 (lower is better)
Translates to: RAQARRAHSACQ*CRRCRRPAASA
Trigger: AGCGGAGGCTGCTGGCCGTCTACACCGGCGGCACCATTGGCATGCGGAGTGAGCTCGGCGTGCTTGTGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS CAA 72 bp AGACTGAGGAGCCAGGAGACCCCACCGCCCAGCGTGTaGCCCTGCAGTGAGGGCCGGCGCTCTTCCACCGAG +
Preference number: 6 (lower is better)
Translates to: RLRSQETPPPSV*PCSEGRRSSTE
Trigger: CTCGGTGGAAGAGCGCCGGCCCTCACTGCAGGGCAACACGCTGGGCGGTGGGGTCTCCTGGCTCCTCAGTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000549809.5
ENST00000551177.6
ENST00000552126.1
CDS TCA 72 bp CTTGGCCAGGGCGGCCTCCGATGTCATGTCGAAGCCTaGGATGACGCCGGCTCCCGCCATGGCCATGCCAGC +
Preference number: 6 (lower is better)
Translates to: LGQGGLRCHVEA*DDAGSRHGHAS
Trigger: GCTGGCATGGCCATGGCGGGAGCCGGCGTCATCTCAGGCTTCGACATGACATCGGAGGCCGCCCTGGCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS GCA 72 bp GTTCACGTCCACACCTCTCTGCAGCAGCATGGTGACTaGCTCTGTGTGGCCTCCCCGGGCGGCCGCGTGCAG +
Preference number: 6 (lower is better)
Translates to: VHVHTSLQQHGD*LCVASPGGRVQ
Trigger: CTGCACGCGGCCGCCCGGGGAGGCCACACAGAGGCAGTCACCATGCTGCTGCAGAGAGGTGTGGACGTGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546892.6
ENST00000551177.6
CDS TCA 72 bp CCAGGGCGGCCTCCGATGTCATGTCGAAGCCTGAGATaGCGCCGGCTCCCGCCATGGCCATGCCAGCTGCAT +
Preference number: 6 (lower is better)
Translates to: PGRPPMSCRSLR*RRLPPWPCQLH
Trigger: ATGCAGCTGGCATGGCCATGGCGGGAGCCGGCGTCATCTCAGGCTTCGACATGACATCGGAGGCCGCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS GCA 72 bp ACCAGGGTGTCCTCAGAGAGGCCGCGGGCTCGGGCGTaGTCCTCGTCATGGAACATGGGCAGTGTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: TRVSSERPRARA*SSSWNMGSVLR
Trigger: CCTGAGGACACTGCCCATGTTCCATGACGAGGAGCACGCCCGAGCCCGCGGCCTCTCTGAGGACACCCTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS GCA 72 bp CCGAAGGTCTCCATGACCACGCCCTTCAGGGGAGGCTaGAAGAAGGCCCGAACCAGGGCGGCAGGGATCCCA +
Preference number: 6 (lower is better)
Translates to: PKVSMTTPFRGG*KKARTRAAGIP
Trigger: TGGGATCCCTGCCGCCCTGGTTCGGGCCTTCTTGCAGCCTCCCCTGAAGGGCGTGGTCATGGAGACCTTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS CCA 72 bp ATCGGTGCCCCTCAGCAGCCATGCCCTGTCCGGGACTaGGAGGAGCCCACACTCACGGTAGCACCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: IGAPQQPCPVRD*EEPTLTVAPGC
Trigger: ACACCCTGGTGCTACCGTGAGTGTGGGCTCCTCCCAGTCCCGGACAGGGCATGGCTGCTGAGGGGCACCGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548372.5
CDS CCA 72 bp CTCCGTCCAGCCCCAGAGGCTGGCAACCCAAGGGTCTaGGGCCAGCTGTGTCTGAACCCCACCCTCGAGGAA +
Preference number: 6 (lower is better)
Translates to: LRPAPEAGNPRV*GQLCLNPTLEE
Trigger: TTCCTCGAGGGTGGGGTTCAGACACAGCTGGCCCCAGACCCTTGGGTTGCCAGCCTCTGGGGCTGGACGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556267.1
CDS CAA 72 bp TCGGTGGCCACCCGCAGCTCCTGCAGCAGGTCGGGCTaGGTGGGTCCGTTCCCTGAACCGAAGGTCTCCATG +
Preference number: 6 (lower is better)
Translates to: SVATRSSCSRSG*VGPFPEPKVSM
Trigger: CATGGAGACCTTCGGTTCAGGGAACGGACCCACCAAGCCCGACCTGCTGCAGGAGCTGCGGGTGGCCACCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS TCA 72 bp CTCCTGCAGCAGGTCGGGCTTGGTGGGTCCGTTCCCTaGACCGAAGGTCTCCATGACCACGCCCTTCAGGGG +
Preference number: 6 (lower is better)
Translates to: LLQQVGLGGSVP*TEGLHDHALQG
Trigger: CCCCTGAAGGGCGTGGTCATGGAGACCTTCGGTTCAGGGAACGGACCCACCAAGCCCGACCTGCTGCAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS GCA 72 bp GCTGGCACTCCAGCACGGTGTAGAGAATCCTCTGGTTaGGGCTGGCCGGGGGTAGCACCAGGGTGTCCTCAG +
Preference number: 6 (lower is better)
Translates to: AGTPARCRESSG*GWPGVAPGCPQ
Trigger: CTGAGGACACCCTGGTGCTACCCCCGGCCAGCCGCAACCAGAGGATTCTCTACACCGTGCTGGAGTGCCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000546892.6
ENST00000551177.6
CDS CCA 72 bp GGCTCAGCCCTGGCTGGCCCAGCACATACGATAGCTTaGCCAGGGCGGCCTCCGATGTCATGTCGAAGCCTG +
Preference number: 6 (lower is better)
Translates to: GSALAGPAHTIA*PGRPPMSCRSL
Trigger: CAGGCTTCGACATGACATCGGAGGCCGCCCTGGCCAAGCTATCGTATGTGCTGGGCCAGCCAGGGCTGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS CCA 72 bp AGCAGCTCCTTCCTGACATCCAGGCTCAGCCCTGGCTaGCCCAGCACATACGATAGCTTGGCCAGGGCGGCC +
Preference number: 6 (lower is better)
Translates to: SSSFLTSRLSPG*PSTYDSLARAA
Trigger: GGCCGCCCTGGCCAAGCTATCGTATGTGCTGGGCCAGCCAGGGCTGAGCCTGGATGTCAGGAAGGAGCTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS CCA 72 bp CAGGACGCCTTCAGGTTAGACACCAGGCAGCACTTCTaGGCATGGGGCCTGGGCACCAACCGCACCCTCCAG +
Preference number: 6 (lower is better)
Translates to: QDAFRLDTRQHF*AWGLGTNRTLQ
Trigger: CTGGAGGGTGCGGTTGGTGCCCAGGCCCCATGCCCAGAAGTGCTGCCTGGTGTCTAACCTGAAGGCGTCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000551177.6
ENST00000551871.1
CDS GCA 72 bp GACCTCTGGGATCACATACTGGCCAGCCATGAGCAGTaGCCCCAGCAGGTTCTCACGGCCGTCGCTCCACAG +
Preference number: 6 (lower is better)
Translates to: DLWDHILASHEQ*PQQVLTAVAPQ
Trigger: CTGTGGAGCGACGGCCGTGAGAACCTGCTGGGGGCACTGCTCATGGCTGGCCAGTATGTGATCCCAGAGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS GCA 72 bp CAGCTCTGGGATCACATACTGGCCAGCCATGAGCAGTaGCCCCAGCAGGTTCTCACGGCCGTCGCTCCACAG +
Preference number: 6 (lower is better)
Translates to: QLWDHILASHEQ*PQQVLTAVAPQ
Trigger: CTGTGGAGCGACGGCCGTGAGAACCTGCTGGGGGCACTGCTCATGGCTGGCCAGTATGTGATCCCAGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551170.1
CDS CCA 72 bp ACTCCAGCACGGTGTAGAGAATCCTCTGGTTGCGGCTaGCCGGGCTGCGGGACAGAAACAGCAGGAGGCGGA +
Preference number: 6 (lower is better)
Translates to: TPARCRESSGCG*PGCGTETAGGG
Trigger: TCCGCCTCCTGCTGTTTCTGTCCCGCAGCCCGGCCAGCCGCAACCAGAGGATTCTCTACACCGTGCTGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548372.5
CDS CAA 72 bp AGGCTCAGCCCTGGCTGGCCCAGCACATACGATAGCTaGGCCAGGGCGGCCTCCGATGTCATGTCGAAGCCT +
Preference number: 6 (lower is better)
Translates to: RLSPGWPSTYDS*ARAASDVMSKP
Trigger: AGGCTTCGACATGACATCGGAGGCCGCCCTGGCCAAGCTATCGTATGTGCTGGGCCAGCCAGGGCTGAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS CCA 72 bp TGGAGCTCCCCACAGAGGCAAGGACGTAGGTCAGGATaGGCCACTCCCAGCAGTCTTCTTCCCACACCAGCT +
Preference number: 6 (lower is better)
Translates to: WSSPQRQGRRSG*ATPSSLLPTPA
Trigger: AGCTGGTGTGGGAAGAAGACTGCTGGGAGTGGCCCATCCTGACCTACGTCCTTGCCTCTGTGGGGAGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548372.5
CDS TCA 72 bp TCGAGGCAGCAAAGGCCATGGTGTCGGTGCCGTGGATaGCCACAAAGCCGTGGTACTGCTCGTAGTGCCTCT +
Preference number: 6 (lower is better)
Translates to: SRQQRPWCRCRG*PQSRGTARSAS
Trigger: AGAGGCACTACGAGCAGTACCACGGCTTTGTGGTCATCCACGGCACCGACACCATGGCCTTTGCTGCCTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551170.1
ENST00000551177.6
CDS CCA 72 bp GCCTCGAGGAAGAGTGGAGAGCAGGAGAGGATTTCCTaGCGACAGTTAGGGGAGCCTCAGGTCTCCATGCAG +
Preference number: 6 (lower is better)
Translates to: ASRKSGEQERIS*RQLGEPQVSMQ
Trigger: CTGCATGGAGACCTGAGGCTCCCCTAACTGTCGCCAGGAAATCCTCTCCTGCTCTCCACTCTTCCTCGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000549809.5
ENST00000552126.1
CDS CCA 72 bp GGGAGCAGAAAGCTGCGAACCTCCGAGCGTCTACCTTaGTTGCCCGGTTGCCCCGAAACAGCTGATTCTGGA +
Preference number: 6 (lower is better)
Translates to: GSRKLRTSERLP*LPGCPETADSG
Trigger: TCCAGAATCAGCTGTTTCGGGGCAACCGGGCAACCAAGGTAGACGCTCGGAGGTTCGCAGCTTTCTGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS GCA 72 bp CTGCGAACCTCCGAGCGTCTACCTTGGTTGCCCGGTTaGCCCGAAACAGCTGATTCTGGAAGAAAAGGCAGA +
Preference number: 6 (lower is better)
Translates to: LRTSERLPWLPG*PETADSGRKGR
Trigger: TCTGCCTTTTCTTCCAGAATCAGCTGTTTCGGGGCAACCGGGCAACCAAGGTAGACGCTCGGAGGTTCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS GCA 72 bp GCAGAAAGCTGCGAACCTCCGAGCGTCTACCTTGGTTaGCCGGTTGCCCCGAAACAGCTGATTCTGGAAGAA +
Preference number: 6 (lower is better)
Translates to: AESCEPPSVYLG*PVAPKQLILEE
Trigger: TTCTTCCAGAATCAGCTGTTTCGGGGCAACCGGGCAACCAAGGTAGACGCTCGGAGGTTCGCAGCTTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS CAA 72 bp AGCAGAAAGCTGCGAACCTCCGAGCGTCTACCTTGGTaGCCCGGTTGCCCCGAAACAGCTGATTCTGGAAGA +
Preference number: 6 (lower is better)
Translates to: SRKLRTSERLPW*PGCPETADSGR
Trigger: TCTTCCAGAATCAGCTGTTTCGGGGCAACCGGGCAACCAAGGTAGACGCTCGGAGGTTCGCAGCTTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6
CDS TCA 72 bp GCGTCTACCTTGGTTGCCCGGTTGCCCCGAAACAGCTaGTTCTGGAAGAAAAGGCAGACCTCTGGGATCACA +
Preference number: 6 (lower is better)
Translates to: ASTLVARLPRNS*FWKKRQTSGIT
Trigger: TGTGATCCCAGAGGTCTGCCTTTTCTTCCAGAATCAGCTGTTTCGGGGCAACCGGGCAACCAAGGTAGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546892.6
ENST00000548372.5
ENST00000551177.6