RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASCC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000100325

Ensembl transcript IDs: ENST00000307790.8, ENST00000397771.6, ENST00000411532.1, ENST00000412689.5, ENST00000431535.5, ENST00000449900.6, ENST00000453160.5, ENST00000454854.5, ENST00000458594.5, ENST00000460313.1, ENST00000462454.1, ENST00000463203.1, ENST00000464287.1, ENST00000465667.6, ENST00000472433.5, ENST00000477074.1, ENST00000478812.5, ENST00000487486.5, ENST00000492821.1, ENST00000495681.5, ENST00000542393.5

Found 843 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCTTCCTTCTTCCTGCGTTCCTGGGTTGTCTCGCGGCTCTGCCCATaGCCTCGGGGGCTGCCGGCCACTGCTGTTGAGCTGTCATGCCGG +
Preference number: 1 (lower is better)
Translates to: ASFFLRSWVVSRLCP*PRGLPATAVELSCR
Trigger: CCGGCATGACAGCTCAACAGCAGTGGCCGGCAGCCCCCGAGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAAGGAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 90 bp TGCGTTCCTGGGTTGTCTCGCGGCTCTGCCCATGGCCTCGGGGGCTaGCGGCCACTGCTGTTGAGCTGTCATGCCGGTACCCTTTCTTGG +
Preference number: 1 (lower is better)
Translates to: CVPGLSRGSAHGLGG*RPLLLSCHAGTLSW
Trigger: CCAAGAAAGGGTACCGGCATGACAGCTCAACAGCAGTGGCCGGCAGCCCCCGAGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 90 bp GAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGCCCTaGACCAGGTCTCAGGATGGGATCATGCCTTTGCTCCTCTTGCGG +
Preference number: 1 (lower is better)
Translates to: EHGLVSLVPLPPHWP*TRSQDGIMPLLLLR
Trigger: CCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAGACCTGGTGCAGGGCCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 90 bp TGGTTGGCTCTTGTCGCCTTGTTGGCTTCCTTCTTCCTGCGTTCCTaGGTTGTCTCGCGGCTCTGCCCATGGCCTCGGGGGCTGCCGGCC +
Preference number: 1 (lower is better)
Translates to: WLALVALLASFFLRS*VVSRLCPWPRGLPA
Trigger: GGCCGGCAGCCCCCGAGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 90 bp CGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTaGCCCTGCACCAGGTCTCAGGATGGGATCATGCCTTTGCTCCTC +
Preference number: 1 (lower is better)
Translates to: RWEHGLVSLVPLPPH*PCTRSQDGIMPLLL
Trigger: GAGGAGCAAAGGCATGATCCCATCCTGAGACCTGGTGCAGGGCCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 90 bp TTGTTGGCTTCCTTCTTCCTGCGTTCCTGGGTTGTCTCGCGGCTCTaGCCATGGCCTCGGGGGCTGCCGGCCACTGCTGTTGAGCTGTCA +
Preference number: 1 (lower is better)
Translates to: LLASFFLRSWVVSRL*PWPRGLPATAVELS
Trigger: TGACAGCTCAACAGCAGTGGCCGGCAGCCCCCGAGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAAGGAAGCCAACAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 90 bp TCCGGTTGTGGTTGGCTCTTGTCGCCTTGTTGGCTTCCTTCTTCCTaGGTTCCTGGGTTGTCTCGCGGCTCTGCCCATGGCCTCGGGGGC +
Preference number: 1 (lower is better)
Translates to: SGCGWLLSPCWLPSS*VPGLSRGSAHGLGG
Trigger: GCCCCCGAGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 90 bp CGCTGCCTCCCCACTGGCCCTGCACCAGGTCTCAGGATGGGATCATaGCTTTGCTCCTCTTGCGGTCGGCCATGGTTCTCCGGTTGTGGT +
Preference number: 1 (lower is better)
Translates to: RCLPTGPAPGLRMGS*LCSSCGRPWFSGCG
Trigger: ACCACAACCGGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAGACCTGGTGCAGGGCCAGTGGGGAGGCAGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 90 bp CTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTaGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGG +
Preference number: 1 (lower is better)
Translates to: LGEGACLPAPRILRL*HKALCVLQEGAHGW
Trigger: CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR GCA 90 bp CACCTCCTCCACCACCACGCTGTACTGCTCGTAGCGCTGCCGCTGTaGCGCCACTGCACGCTTGTCGTTCAGCAAACTCCGCGTGTTTTC +
Preference number: 1 (lower is better)
Translates to: HLLHHHAVLLVALPL*RHCTLVVQQTPRVF
Trigger: GAAAACACGCGGAGTTTGCTGAACGACAAGCGTGCAGTGGCGGCACAGCGGCAGCGCTACGAGCAGTACAGCGTGGTGGTGGAGGAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 90 bp CTCCCCACTGGCCCTGCACCAGGTCTCAGGATGGGATCATGCCTTTaGTCCTCTTGCGGTCGGCCATGGTTCTCCGGTTGTGGTTGGCTC +
Preference number: 1 (lower is better)
Translates to: LPTGPAPGLRMGSCL*SSCGRPWFSGCGWL
Trigger: GAGCCAACCACAACCGGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAGACCTGGTGCAGGGCCAGTGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 90 bp CACCACCACGCTGTACTGCTCGTAGCGCTGCCGCTGTGCCGCCACTaGACGCTTGTCGTTCAGCAAACTCCGCGTGTTTTCCTCCTTCCT +
Preference number: 1 (lower is better)
Translates to: HHHAVLLVALPLCRH*TLVVQQTPRVFLLP
Trigger: AGGAAGGAGGAAAACACGCGGAGTTTGCTGAACGACAAGCGTGCAGTGGCGGCACAGCGGCAGCGCTACGAGCAGTACAGCGTGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 90 bp GGCGAGAAAGGCCATGCGCCTGGCTTCTGCCTTCTCTCTCAGCACTaGAGGGTCCTGAACAAAATGGTCGGGCTTGGGAGCCTCCTCGTC +
Preference number: 1 (lower is better)
Translates to: GEKGHAPGFCLLSQH*RVLNKMVGLGSLLV
Trigger: GACGAGGAGGCTCCCAAGCCCGACCATTTTGTTCAGGACCCTGCAGTGCTGAGAGAGAAGGCAGAAGCCAGGCGCATGGCCTTTCTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR TCA 90 bp CAGTCCGCGTCTCGTCCAAGACTGATGAGGCCTGCTGCAGCAAGCTaGTGTCTTCGGCCACGGGGAAGAGTGCATCATAGTCCCGGAGGA +
Preference number: 1 (lower is better)
Translates to: QSASRPRLMRPAAAS*CLRPRGRVHHSPGG
Trigger: TCCTCCGGGACTATGATGCACTCTTCCCCGTGGCCGAAGACATCAGCTTGCTGCAGCAGGCCTCATCAGTCTTGGACGAGACGCGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 90 bp CGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCATTGGCTACGAAGGTaGCGCGTTCCAGGTACTCCTCCACTAGGGCGGGAATGTTGTCTT +
Preference number: 1 (lower is better)
Translates to: REARPGASRGHWLRR*RVPGTPPLGRECCL
Trigger: AAGACAACATTCCCGCCCTAGTGGAGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
3UTR TCA 90 bp CCCATGCACTCCTCTTCCTCCGAGTTCTCCGGATGTGATGATGCTTaGCTGACTGCCTCTGCTGTCACCGTGACCCCGTTAGGCTCCCCA +
Preference number: 1 (lower is better)
Translates to: PMHSSSSEFSGCDDA*LTASAVTVTPLGSP
Trigger: TGGGGAGCCTAACGGGGTCACGGTGACAGCAGAGGCAGTCAGTCAAGCATCATCACATCCGGAGAACTCGGAGGAAGAGGAGTGCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 90 bp TGGGTCTTTAGCATCTGTGGCTTTCCGTCTGTCCACCCCTTCCCATaGACTCTCGACTGCCTGGAGGATGTAGGCAGTCCGCGTCTCGTC +
Preference number: 1 (lower is better)
Translates to: WVFSICGFPSVHPFP*TLDCLEDVGSPRLV
Trigger: GACGAGACGCGGACTGCCTACATCCTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGACAGACGGAAAGCCACAGATGCTAAAGACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 90 bp ACCAGAATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCATTaGCTACGAAGGTGGCGCGTTCCAGGTACTCCTCCACTAGGGCGG +
Preference number: 1 (lower is better)
Translates to: TRIYREARPGASRGH*LRRWRVPGTPPLGR
Trigger: CCGCCCTAGTGGAGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
3UTR TCA 90 bp GGTTTCATTTCTCAAGGTCTGGCAGCAGGTCCTTCACTTGGGAGATaGGAGAGTCCAGTTCCACCCCACACATGGCAGGGCCCACAGCCG +
Preference number: 1 (lower is better)
Translates to: GFISQGLAAGPSLGR*ESPVPPHTWQGPQP
Trigger: CGGCTGTGGGCCCTGCCATGTGTGGGGTGGAACTGGACTCTCTCATCTCCCAAGTGAAGGACCTGCTGCCAGACCTTGAGAAATGAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 90 bp GGTCTCAGGATGGGATCATGCCTTTGCTCCTCTTGCGGTCGGCCATaGTTCTCCGGTTGTGGTTGGCTCTTGTCGCCTTGTTGGCTTCCT +
Preference number: 1 (lower is better)
Translates to: GLRMGSCLCSSCGRP*FSGCGWLLSPCWLP
Trigger: AGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 90 bp AGGGTCTGGTTTCATTTCTCAAGGTCTGGCAGCAGGTCCTTCACTTaGGAGATGAGAGAGTCCAGTTCCACCCCACACATGGCAGGGCCC +
Preference number: 1 (lower is better)
Translates to: RVWFHFSRSGSRSFT*EMRESSSTPHMAGP
Trigger: GGGCCCTGCCATGTGTGGGGTGGAACTGGACTCTCTCATCTCCCAAGTGAAGGACCTGCTGCCAGACCTTGAGAAATGAAACCAGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 90 bp ATCATGCCTTTGCTCCTCTTGCGGTCGGCCATGGTTCTCCGGTTGTaGTTGGCTCTTGTCGCCTTGTTGGCTTCCTTCTTCCTGCGTTCC +
Preference number: 1 (lower is better)
Translates to: IMPLLLLRSAMVLRL*LALVALLASFFLRS
Trigger: GGAACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCATGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR TCA 90 bp TGCTCTTGCCCTTGTGCACCCGGCTCAGGTCTACTGAGTCCCTGCTaGACACATCAAACTCGTCATTCTGGAAGACGTTGTGGCGAGACG +
Preference number: 1 (lower is better)
Translates to: CSCPCAPGSGLLSPC*THQTRHSGRRCGET
Trigger: CGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTTCAGCAGGGACTCAGTAGACCTGAGCCGGGTGCACAAGGGCAAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 90 bp AGGGATGGTGAATGGCCTGCGGCTGATGAGCTCGTCATCAGAGTCTaGATCATTGGCGCCCACCTGGTTGCCATCGTATGTGTCATCGTA +
Preference number: 1 (lower is better)
Translates to: RDGEWPAADELVIRV*IIGAHLVAIVCVIV
Trigger: TACGATGACACATACGATGGCAACCAGGTGGGCGCCAATGATGCAGACTCTGATGACGAGCTCATCAGCCGCAGGCCATTCACCATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 90 bp AGCTGTCATGCCGGTACCCTTTCTTGGCGAGAAAGGCCATGCGCCTaGCTTCTGCCTTCTCTCTCAGCACTGCAGGGTCCTGAACAAAAT +
Preference number: 1 (lower is better)
Translates to: SCHAGTLSWRERPCA*LLPSLSALQGPEQN
Trigger: ATTTTGTTCAGGACCCTGCAGTGCTGAGAGAGAAGGCAGAAGCCAGGCGCATGGCCTTTCTCGCCAAGAAAGGGTACCGGCATGACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR TCA 90 bp CTCCTTCCTGGTGCTCTTGCCCTTGTGCACCCGGCTCAGGTCTACTaGGTCCCTGCTGAACACATCAAACTCGTCATTCTGGAAGACGTT +
Preference number: 1 (lower is better)
Translates to: LLPGALALVHPAQVY*VPAEHIKLVILEDV
Trigger: AACGTCTTCCAGAATGACGAGTTTGATGTGTTCAGCAGGGACTCAGTAGACCTGAGCCGGGTGCACAAGGGCAAGAGCACCAGGAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 90 bp CTCAGGTCTACTGAGTCCCTGCTGAACACATCAAACTCGTCATTCTaGAAGACGTTGTGGCGAGACGTCAGCAGGGGTGTAGGGTCTGGT +
Preference number: 1 (lower is better)
Translates to: LRSTESLLNTSNSSF*KTLWRDVSRGVGSG
Trigger: ACCAGACCCTACACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTTCAGCAGGGACTCAGTAGACCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR TCA 90 bp ACACAAAATACCGGTCTGCCTTCTGCTCGGGGTGCTCACAGTCAGTaGGTGGCAGATCCAAGGTCTCCTGTCTTGCTGTCCAGTGTTCTT +
Preference number: 1 (lower is better)
Translates to: TQNTGLPSARGAHSQ*VADPRSPVLLSSVL
Trigger: AAGAACACTGGACAGCAAGACAGGAGACCTTGGATCTGCCACTCACTGACTGTGAGCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453160.5
3UTR GCA 90 bp GGCGGTTTGTATAACACAAAATACCGGTCTGCCTTCTGCTCGGGGTaGTCACAGTCAGTGAGTGGCAGATCCAAGGTCTCCTGTCTTGCT +
Preference number: 1 (lower is better)
Translates to: GGLYNTKYRSAFCSG*SQSVSGRSKVSCLA
Trigger: AGCAAGACAGGAGACCTTGGATCTGCCACTCACTGACTGTGAGCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGTTATACAAACCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453160.5
3UTR CCA 90 bp GAGTCCCTGCTGAACACATCAAACTCGTCATTCTGGAAGACGTTGTaGCGAGACGTCAGCAGGGGTGTAGGGTCTGGTTTCATTTCTCAA +
Preference number: 1 (lower is better)
Translates to: ESLLNTSNSSFWKTL*RDVSRGVGSGFISQ
Trigger: TTGAGAAATGAAACCAGACCCTACACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTTCAGCAGGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR TCA 90 bp CACAGCTGCTTTCTAGGATGGGAAGGAGGCAGATCTGGTTCAGGATaGTGTGGAAAATCTCCATTAGCTTCTTCCTGGAATGGGAGAGCC +
Preference number: 1 (lower is better)
Translates to: HSCFLGWEGGRSGSG*CGKSPLASSWNGRA
Trigger: GGCTCTCCCATTCCAGGAAGAAGCTAATGGAGATTTTCCACATCATCCTGAACCAGATCTGCCTCCTTCCCATCCTAGAAAGCAGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 90 bp TGGTTCAGGATGATGTGGAAAATCTCCATTAGCTTCTTCCTGGAATaGGAGAGCCTCTGCCACAGGTCACCAAGAAGCTTGCTATCTTCA +
Preference number: 1 (lower is better)
Translates to: WFRMMWKISISFFLE*ESLCHRSPRSLLSS
Trigger: TGAAGATAGCAAGCTTCTTGGTGACCTGTGGCAGAGGCTCTCCCATTCCAGGAAGAAGCTAATGGAGATTTTCCACATCATCCTGAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 90 bp AGGTCTGGCAAGCCAAAGGGAAGATATCCAGAAAGGCCCAAAGTGTaGTGCAGGTATCACAAAGGTAGAGAACAATGTCCTTTAATTCCA +
Preference number: 1 (lower is better)
Translates to: RSGKPKGRYPERPKV*CRYHKGREQCPLIP
Trigger: TGGAATTAAAGGACATTGTTCTCTACCTTTGTGATACCTGCACCACACTTTGGGCCTTTCTGGATATCTTCCCTTTGGCTTGCCAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR TCA 90 bp CCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCATGGCTGGCTGGTAGATaGGAGGCGGCCTTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: PISFPLAQLGEGACLPAPWLAGR*EAAFSG
Trigger: CCCTGAGAAGGCCGCCTCTCATCTACCAGCCAGCCA...TGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR GCA 90 bp TTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCCGCAGCTGGGGGAAGGTaGCTGCTTGCCGGCCCCACG +
Preference number: 2 (lower is better)
Translates to: LWPEVWGACLGTPSPSLSAAGGR*LLAGPT
Trigger: CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGC...GGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR GCA 90 bp TCCTTCTTCCTGCGTTCCTGGGTTGTCTCGCGGCTCTGCCCATGGCCTCGGGGGCCGCGGCTGCTCCCATaGACTCCTCTTCCTCCGAGT +
Preference number: 2 (lower is better)
Translates to: SFFLRSWVVSRLCPWPRGPRLLP*TPLPPS
Trigger: ACTCGGAGGAAGAGGAGTGCATGGGAGCAGCCGCGG...CCCCCGAGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CCA 90 bp CCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCAGAAGGCGCTCATGGCTaGCTGGTAGATGAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: PISFPLAQLGEGACLPAPEGAHG*LVDERR
Trigger: CCGCCTCTCATCTACCAGCCAGCCATGAGCGCCTTC...TGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR TCA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCATGGCTGGCTGGTAGATaGGAGGCGGCCTTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: GEGACLPAPRILRLWHKAWLAGR*EAAFSG
Trigger: CCCTGAGAAGGCCGCCTCTCATCTACCAGCCAGCCA...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR GCA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCCTGGGGGAAGGTGCCTaGTTGCCGGCCCCACGGATT +
Preference number: 2 (lower is better)
Translates to: WCLVARGLGRLPWDSIPILGEGA*LPAPRI
Trigger: AATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAG...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR GCA 90 bp GTCCAGTTCCACCCCACACATGGCAGGGCCCACAGCCGCGGCTGCTCCCATGCAGGCCACGGGGAAGAGTaGATCATAGTCCCGGAGGAA +
Preference number: 2 (lower is better)
Translates to: VQFHPTHGRAHSRGCSHAGHGEE*IIVPEE
Trigger: TTCCTCCGGGACTATGATGCACTCTTCCCCGTGGCC...TGCATGGGAGCAGCCGCGGCTGTGGGCCCTGCCATGTGTGGGGTGGAACTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACGAAGGCGCTCATGGCTaGCTGGTAGATGAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHEGAHG*LVDERR
Trigger: CCGCCTCTCATCTACCAGCCAGCCATGAGCGCCTTC...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR CAA 90 bp CCTCCCCACTGGCCCTGCACCAGGTCTCAGGATGGGATCATGCCTTaGCTCCTCTTGCGGTCGGCCATGGTTCTCCGGTTGTGGTTGGCT +
Preference number: 2 (lower is better)
Translates to: PPHWPCTRSQDGIMP*LLLRSAMVLRLWLA
Trigger: AGCCAACCACAACCGGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAGACCTGGTGCAGGGCCAGTGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR TCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGTGGCTGGCTGGTAGATaGGAGGCGGCCTTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRWLAGR*EAAFSG
Trigger: CCCTGAGAAGGCCGCCTCTCATCTACCAGCCAGCCA...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR GCA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGGGCCTTCTCAGGGGCTaGAAAGCTGAGGCTGTTGAG +
Preference number: 2 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRGLLRG*KAEAVE
Trigger: CTCAACAGCCTCAGCTTTGCAGCCCCTGAGAAGGCC...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR GCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACGGCCTTCTCAGGGGCTaGAAAGCTGAGGCTGTTGAG +
Preference number: 2 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHGLLRG*KAEAVE
Trigger: CTCAACAGCCTCAGCTTTGCAGCCCCTGAGAAGGCC...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR GCA 90 bp TTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCCGGGAAGGTGCCTGCTTaGCGGCCCCACGGATTCTTC +
Preference number: 2 (lower is better)
Translates to: LWPEVWGACLGTPSPSLSGKVPA*RPHGFF
Trigger: GAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC...GGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR GCA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCTGGGGGAAGGTGCCTaGTTGCCGGCCCCACGGATT +
Preference number: 2 (lower is better)
Translates to: SCGPRFGALALGLHPHLFLGEGA*LPAPRI
Trigger: AATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAG...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR GCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCAGAGGTTTGGGGCGCTTaGCTTGGGACTCCATCCCCA +
Preference number: 2 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPEVWGA*LGTPSP
Trigger: TGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTC...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR GCA 90 bp TCCTTCTTCCTGCGTTCCTGGGTTGTCTCGCGGCTCTGCCCATGGCCTCGGGGGGAATGGGAGAGCCTCTaGCACAGGTCACCAAGAAGC +
Preference number: 2 (lower is better)
Translates to: SFFLRSWVVSRLCPWPRGEWESL*HRSPRS
Trigger: GCTTCTTGGTGACCTGTGGCAGAGGCTCTCCCATTC...CCCCCGAGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAAGGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACGAAGGCGCTCATGGCTaGCTGGTAGATGAGAGGCGG +
Preference number: 2 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDEGAHG*LVDERR
Trigger: CCGCCTCTCATCTACCAGCCAGCCATGAGCGCCTTC...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR CCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTTTGTGGCCCGAGGTTTaGGGCGCTTGCCTTGGGACT +
Preference number: 2 (lower is better)
Translates to: ACLPAPRILRLWHKALCVLWPEV*GACLGT
Trigger: AGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR CCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGAGGCCACCTCTCATGTaGGTCTGCAGGACCCCCTCC +
Preference number: 2 (lower is better)
Translates to: LPAPRILRLWHKALCVLQRPPLM*VCRTPS
Trigger: GGAGGGGGTCCTGCAGACCCACATGAGAGGTGGCCT...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR GCA 90 bp TCTGTCCACCCCTTCCCATGCACTCTCGACTGCCTGGAGGATGTAGGCAGTCCGGGCCTTCTCAGGGGCTaGAAAGCTGAGGCTGTTGAG +
Preference number: 2 (lower is better)
Translates to: SVHPFPCTLDCLEDVGSPGLLRG*KAEAVE
Trigger: CTCAACAGCCTCAGCTTTGCAGCCCCTGAGAAGGCC...CGGACTGCCTACATCCTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR GCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCAAGGCACTGTGTGTTCTaGAGGAAGGCGCTCATGGCT +
Preference number: 2 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPRHCVF*RKALMA
Trigger: AGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCT...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR CCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCAAGGGTAAAGGGGAAGTaGTGTCTTGTGGCCCGAGGT +
Preference number: 2 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPRVKGK*CLVARG
Trigger: ACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR CCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTCTCCGGTTGTGGTTaGCTCTTGTCGCCTTGTTGG +
Preference number: 2 (lower is better)
Translates to: WDSIPISFPLAQLGEGACFSGCG*LLSPCW
Trigger: CCAACAAGGCGACAAGAGCCAACCACAACCGGAGAA...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR TCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAGCACTGCAGGGTCCTaGACAAAATGGTCGGGCTTG +
Preference number: 2 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRSTAGS*TKWSGL
Trigger: CAAGCCCGACCATTTTGTTCAGGACCCTGCAGTGCT...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR GCA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGGGCCTTCTCAGGGGCTaGAAAGCTGAGGCTGTTGAG +
Preference number: 2 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWGLLRG*KAEAVE
Trigger: CTCAACAGCCTCAGCTTTGCAGCCCCTGAGAAGGCC...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR GCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACCCTCTCATGTGGGTCTaGAGGACCCCCTCCCATTTA +
Preference number: 2 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDPLMWV*RTPSHL
Trigger: TAAATGGGAGGGGGTCCTGCAGACCCACATGAGAGG...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CAA 90 bp GGGATCATGCCTTTGCTCCTCTTGCGGTCGGCCATGGTTCTCCGGTaGTGGTTGGCTCTTGTCGCCTTGTTGGCTTCCTTCTTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: GIMPLLLLRSAMVLR*WLALVALLASFFLR
Trigger: ACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCATGATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CCA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCGGATTCTTCGGCTGTaGCATAAGGCACTGTGTGTT +
Preference number: 2 (lower is better)
Translates to: GKWCLVARGLGRLPWDSIRILRL*HKALCV
Trigger: AACACACAGTGCCTTATGCCACAGCCGAAGAATCCG...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR CCA 90 bp TGGTTCTCCGGTTGTGGTTGGCTCTTGTCGCCTTGTTGGCTTCCTTCTTCCTGCTTGTGGCCCGAGGTTTaGGGCGCTTGCCTTGGGACT +
Preference number: 2 (lower is better)
Translates to: WFSGCGWLLSPCWLPSSCLWPEV*GACLGT
Trigger: AGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA...GCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGAGAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGCGGATTCTTCGGCTGTaGCATAAGGCACTGTGTGTT +
Preference number: 2 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRRILRL*HKALCV
Trigger: AACACACAGTGCCTTATGCCACAGCCGAAGAATCCG...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR CAA 90 bp GTGAATGGCCTGCGGCTGATGAGCTCGTCATCAGAGTCTGCATCATaGGCGCCCACCTGGTTGCCATCGTATGTGTCATCGTACTCATCC +
Preference number: 2 (lower is better)
Translates to: VNGLRLMSSSSESAS*APTWLPSYVSSYSS
Trigger: GGATGAGTACGATGACACATACGATGGCAACCAGGTGGGCGCCAATGATGCAGACTCTGATGACGAGCTCATCAGCCGCAGGCCATTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR TCA 90 bp CTTCGGCCACGGGGAAGAGTGCATCATAGTCCCGGAGGAACCTCTTCTCCTGCATCTTTGGATTCCTTGTaGGTGGACATGCGGAGGAAG +
Preference number: 2 (lower is better)
Translates to: LRPRGRVHHSPGGTSSPASLDSL*VDMRRK
Trigger: CTTCCTCCGCATGTCCACTCACAAGGAATCCAAAGA...TGCAGGAGAAGAGGTTCCTCCGGGACTATGATGCACTCTTCCCCGTGGCCGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR GCA 90 bp GAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGGGCTGAGGCACAAAATACCGGTCTaGCTTCTGCTCGGGGTGGCG +
Preference number: 2 (lower is better)
Translates to: EKHFDGGASACQQPQGLRHKIPV*LLLGVA
Trigger: CGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTG...CCTCAGCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CCA 90 bp CTGGAAGGTCTGGCAAGCCAAAGGGAAGATATCCAGAAAGGCCCAAAGTGTGGTGGAAGTGGTGTCTTGTaGCCCGAGGTTTGGGGCGCT +
Preference number: 2 (lower is better)
Translates to: LEGLASQREDIQKGPKCGGSGVL*PEVWGA
Trigger: AGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC...ACCACACTTTGGGCCTTTCTGGATATCTTCCCTTTGGCTTGCCAGACCTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CAA 90 bp ACGAAGGTGGCGCGTTCCAGGTACTCCTCCACTAGGGCGGGAATGTaGTCTTTAGGGGGCGGTTTGTATAACACAAAATACCGGTCTGCC +
Preference number: 2 (lower is better)
Translates to: TKVARSRYSSTRAGM*SLGGGLYNTKYRSA
Trigger: GGCAGACCGGTATTTTGTGTTATACAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGTGGAGGAGTACCTGGAACGCGCCACCTTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
3UTR-3UTR TCA 90 bp GGTGAGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGGGCCACCAGAATTTATCGTaGGGCAAGGCCAGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: GEKNTSMEALLHVNNLRGHQNLS*GKARSQ
Trigger: CTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTG...GCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
3UTR-3UTR GCA 90 bp CCAGAATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCATTGGCTACGAACACAAAATACCGGTCTaGCTTCTGCTCGGGGTGCTC +
Preference number: 2 (lower is better)
Translates to: PEFIVRQGQEPVEVIGYEHKIPV*LLLGVL
Trigger: GAGCACCCCGAGCAGAAGGCAGACCGGTATTTTGTG...TTCGTAGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453160.5
3UTR-3UTR CCA 90 bp GCTGTGCCGCCACTGCACGCTTGTCGTTCAGCAAACTCCGCGTGTTTTCCTCCTTCAAACTCGTCATTCTaGAAGACGTTGTGGCGAGAC +
Preference number: 2 (lower is better)
Translates to: AVPPLHACRSANSACFPPSNSSF*KTLWRD
Trigger: GTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGA...AGGAGGAAAACACGCGGAGTTTGCTGAACGACAAGCGTGCAGTGGCGGCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR GCA 90 bp CTGGAAGGTCTGGCAAGCCAAAGGGAAGATATCCAGAAAGGCCCAAAGTGTGGTCGATGGAGGCGCTTCTaGATGTCAACAACCTCAGGG +
Preference number: 2 (lower is better)
Translates to: LEGLASQREDIQKGPKCGRWRRF*MSTTSG
Trigger: CCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCG...ACCACACTTTGGGCCTTTCTGGATATCTTCCCTTTGGCTTGCCAGACCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR GCA 90 bp CAGGTCCTTCACTTGGGAGATGAGAGAGTCCAGTTCCACCCCACACATGGCAGGCCTTGCAAACCACAGTaGTGGAGGATATTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: QVLHLGDERVQFHPTHGRPCKPQ*WRILLK
Trigger: CTTCAGCAATATCCTCCAGCACTGTGGTTTGCAAGG...CCTGCCATGTGTGGGGTGGAACTGGACTCTCTCATCTCCCAAGTGAAGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CCA 90 bp CAGGTCCTTCACTTGGGAGATGAGAGAGTCCAGTTCCACCCCACACATGGCAGGGAAAGGCCCAAAGTGTaGTGCAGGTATCACAAAGGT +
Preference number: 2 (lower is better)
Translates to: QVLHLGDERVQFHPTHGRERPKV*CRYHKG
Trigger: ACCTTTGTGATACCTGCACCACACTTTGGGCCTTTC...CCTGCCATGTGTGGGGTGGAACTGGACTCTCTCATCTCCCAAGTGAAGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CCA 90 bp CAGGTCCTTCACTTGGGAGATGAGAGAGTCCAGTTCCACCCCACACATGGCAGGTGCTTCTGGAAGGTCTaGCAAGCCAAAGGGAAGATA +
Preference number: 2 (lower is better)
Translates to: QVLHLGDERVQFHPTHGRCFWKV*QAKGKI
Trigger: TATCTTCCCTTTGGCTTGCCAGACCTTCCAGAAGCA...CCTGCCATGTGTGGGGTGGAACTGGACTCTCTCATCTCCCAAGTGAAGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR GCA 90 bp CCGCCACTGCACGCTTGTCGTTCAGCAAACTCCGCGTGTTTTCCTCCTTCCTGGCCTCCTCTTCTTAATTaGAGACTCCATTTCGGGAAT +
Preference number: 2 (lower is better)
Translates to: PPLHACRSANSACFPPSWPPLLN*RLHFGN
Trigger: ATTCCCGAAATGGAGTCTGCAATTAAGAAGAGGAGG...CCAGGAAGGAGGAAAACACGCGGAGTTTGCTGAACGACAAGCGTGCAGTGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CCA 90 bp GAGGAAGGTGAGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCCATTGGCTACGAAGGTaGCGCGTTCCAGGTACTCCT +
Preference number: 2 (lower is better)
Translates to: EEGEKNTSMEALLHVNNLHWLRR*RVPGTP
Trigger: AGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATG...GAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
3UTR CAA 90 bp ACTGAGTCCCTGCTGAACACATCAAACTCGTCATTCTGGAAGACGTaGTGGCGAGACGTCAGCAGGGGTGTAGGGTCTGGTTTCATTTCT +
Preference number: 2 (lower is better)
Translates to: TESLLNTSNSSFWKT*WRDVSRGVGSGFIS
Trigger: AGAAATGAAACCAGACCCTACACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTTCAGCAGGGACTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CCA 90 bp TCCGGTTGTGGTTGGCTCTTGTCGCCTTGTTGGCTTCCTTCTTCCTGCGTTCCTTTTCCTATCATCTTCTaGAGCAGTGGTGAGTTGCCT +
Preference number: 2 (lower is better)
Translates to: SGCGWLLSPCWLPSSCVPFPIIF*SSGELP
Trigger: AGGCAACTCACCACTGCTCCAGAAGATGATAGGAAA...AGGAACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR TCA 90 bp GGAATGTTGTCTTTAGGGGGCGGTTTGTATAACACAAAATACCGGTCTGCCTTCGGTGCTCACAGTCAGTaGGTGGCAGATCCAAGGTCT +
Preference number: 2 (lower is better)
Translates to: GMLSLGGGLYNTKYRSAFGAHSQ*VADPRS
Trigger: AGACCTTGGATCTGCCACTCACTGACTGTGAGCACC...GAAGGCAGACCGGTATTTTGTGTTATACAAACCGCCCCCTAAAGACAACATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453160.5
3UTR CAA 90 bp GTGGTGAGTTGCCTTTTCCAAAGAGCACGCAGAGGTCCAGGATCTTaGGAATGTCAAAGAGGAAGTTATTGTAGAGGATTTCTCCAAACG +
Preference number: 2 (lower is better)
Translates to: VVSCLFQRARRGPGS*ECQRGSYCRGFLQT
Trigger: CGTTTGGAGAAATCCTCTACAATAACTTCCTCTTTGACATTCCAAAGATCCTGGACCTCTGCGTGCTCTTTGGAAAAGGCAACTCACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 72 bp GGGTTGTCTCGCGGCTCTGCCCATGGCCTCGGGGGCTaGCGGCCACTGCTGTTGAGCTGTCATGCCGGTACC +
Preference number: 3 (lower is better)
Translates to: GLSRGSAHGLGG*RPLLLSCHAGT
Trigger: GGTACCGGCATGACAGCTCAACAGCAGTGGCCGGCAGCCCCCGAGGCCATGGGCAGAGCCGCGAGACAACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CAA 90 bp GAGAGTCCAGTTCCACCCCACACATGGCAGGGCCCACAGCCGCGGCTGCTCCCACTTGTGGCCCGAGGTTaGGGGCGCTTGCCTTGGGAC +
Preference number: 3 (lower is better)
Translates to: ESPVPPHTWQGPQPRLLPLVARG*GRLPWD
Trigger: GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAG...TGGGAGCAGCCGCGGCTGTGGGCCCTGCCATGTGTGGGGTGGAACTGGACTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp TTCCTGCGTTCCTGGGTTGTCTCGCGGCTCTGCCCATaGCCTCGGGGGCTGCCGGCCACTGCTGTTGAGCTG +
Preference number: 3 (lower is better)
Translates to: FLRSWVVSRLCP*PRGLPATAVEL
Trigger: CAGCTCAACAGCAGTGGCCGGCAGCCCCCGAGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 72 bp TTCCACCCCACACATGGCAGGGCCCACAGCCGCGGCTaGTCCCATGCACTCCTCTTCCTCCGAGTTCTCCGG +
Preference number: 3 (lower is better)
Translates to: FHPTHGRAHSRG*SHALLFLRVLR
Trigger: CCGGAGAACTCGGAGGAAGAGGAGTGCATGGGAGCAGCCGCGGCTGTGGGCCCTGCCATGTGTGGGGTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 72 bp TCCTTCTTCCTGCGTTCCTGGGTTGTCTCGCGGCTCTaGCCATGGCCTCGGGGGCTGCCGGCCACTGCTGTT +
Preference number: 3 (lower is better)
Translates to: SFFLRSWVVSRL*PWPRGLPATAV
Trigger: AACAGCAGTGGCCGGCAGCCCCCGAGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp CACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTaGCCCTGCACCAGGTCTCAGGATGGGATCATGCCT +
Preference number: 3 (lower is better)
Translates to: HGLVSLVPLPPH*PCTRSQDGIMP
Trigger: AGGCATGATCCCATCCTGAGACCTGGTGCAGGGCCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CAA 90 bp GTCCAGTTCCACCCCACACATGGCAGGGCCCACAGCCGCGGCTGCTCCCATGCAAGCCAGTCGAGGTCATaGGCTACGAAGGTGGCGCGT +
Preference number: 3 (lower is better)
Translates to: VQFHPTHGRAHSRGCSHASQSRS*ATKVAR
Trigger: ACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCT...TGCATGGGAGCAGCCGCGGCTGTGGGCCCTGCCATGTGTGGGGTGGAACTGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR TCA 72 bp CTGCCCATGGCCTCGGGGGCTGCCGGCCACTGCTGTTaGGCTGTCATGCCGGTACCCTTTCTTGGCGAGAAA +
Preference number: 3 (lower is better)
Translates to: LPMASGAAGHCC*AVMPVPFLGEK
Trigger: TTTCTCGCCAAGAAAGGGTACCGGCATGACAGCTCAACAGCAGTGGCCGGCAGCCCCCGAGGCCATGGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 72 bp ATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTaGTTGCCGGCCCCACGGATTCTTCGGCTGTGGCAT +
Preference number: 3 (lower is better)
Translates to: ISFPLAQLGEGA*LPAPRILRLWH
Trigger: ATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR GCA 72 bp CACCACCACGCTGTACTGCTCGTAGCGCTGCCGCTGTaGCGCCACTGCACGCTTGTCGTTCAGCAAACTCCG +
Preference number: 3 (lower is better)
Translates to: HHHAVLLVALPL*RHCTLVVQQTP
Trigger: CGGAGTTTGCTGAACGACAAGCGTGCAGTGGCGGCACAGCGGCAGCGCTACGAGCAGTACAGCGTGGTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 72 bp CTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGCCCTaGACCAGGTCTCAGGATGGGATCATGCCTTTGCTC +
Preference number: 3 (lower is better)
Translates to: LVSLVPLPPHWP*TRSQDGIMPLL
Trigger: GAGCAAAGGCATGATCCCATCCTGAGACCTGGTGCAGGGCCAGTGGGGAGGCAGCGGCACCAGACTCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp CTTGTCGCCTTGTTGGCTTCCTTCTTCCTGCGTTCCTaGGTTGTCTCGCGGCTCTGCCCATGGCCTCGGGGG +
Preference number: 3 (lower is better)
Translates to: LVALLASFFLRS*VVSRLCPWPRG
Trigger: CCCCCGAGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAAGGAAGCCAACAAGGCGACAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CAA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTGGGGAAGGTGCCTGCTaGCCGGCCCCACGGATTCTT +
Preference number: 3 (lower is better)
Translates to: ACLPAPRILRLWHKALCVGEGAC*PAPRIL
Trigger: AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR CAA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCGAGGTTTGGGGCGCTaGCCTTGGGACTCCATCCCC +
Preference number: 3 (lower is better)
Translates to: ACLPAPRILRLWHKALCVRGLGR*PWDSIP
Trigger: GGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCG...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR CAA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTGGGGAAGGTGCCTGCTaGCCGGCCCCACGGATTCTT +
Preference number: 3 (lower is better)
Translates to: SCGPRFGALALGLHPHLFGEGAC*PAPRIL
Trigger: AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR-3UTR CAA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATTTGGGGCGCTTGCCTaGGGACTCCATCCCCATCTC +
Preference number: 3 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPFGALA*GLHPHL
Trigger: GAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAA...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR GCA 72 bp CCCACTGGCCCTGCACCAGGTCTCAGGATGGGATCATaGCTTTGCTCCTCTTGCGGTCGGCCATGGTTCTCC +
Preference number: 3 (lower is better)
Translates to: PTGPAPGLRMGS*LCSSCGRPWFS
Trigger: GGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAGACCTGGTGCAGGGCCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTaGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAG +
Preference number: 3 (lower is better)
Translates to: WCLVARGLGRLP*DSIPISFPLAQ
Trigger: CTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR CCA 72 bp AGGCCAGGAGCCAGTCGAGGTCATTGGCTACGAAGGTaGCGCGTTCCAGGTACTCCTCCACTAGGGCGGGAA +
Preference number: 3 (lower is better)
Translates to: RPGASRGHWLRR*RVPGTPPLGRE
Trigger: TTCCCGCCCTAGTGGAGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCTCCTGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
3UTR TCA 72 bp TGTTCTGCAGGAAGGCGCTCATGGCTGGCTGGTAGATaGGAGGCGGCCTTCTCAGGGGCTGCAAAGCTGAGG +
Preference number: 3 (lower is better)
Translates to: CSAGRRSWLAGR*EAAFSGAAKLR
Trigger: CCTCAGCTTTGCAGCCCCTGAGAAGGCCGCCTCTCATCTACCAGCCAGCCATGAGCGCCTTCCTGCAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR GCA 72 bp GCAGTCCGCGTCTCGTCCAAGACTGATGAGGCCTGCTaGAGCAAGCTGATGTCTTCGGCCACGGGGAAGAGT +
Preference number: 3 (lower is better)
Translates to: AVRVSSKTDEAC*SKLMSSATGKS
Trigger: ACTCTTCCCCGTGGCCGAAGACATCAGCTTGCTGCAGCAGGCCTCATCAGTCTTGGACGAGACGCGGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 72 bp GCTGTACTGCTCGTAGCGCTGCCGCTGTGCCGCCACTaGACGCTTGTCGTTCAGCAAACTCCGCGTGTTTTC +
Preference number: 3 (lower is better)
Translates to: AVLLVALPLCRH*TLVVQQTPRVF
Trigger: GAAAACACGCGGAGTTTGCTGAACGACAAGCGTGCAGTGGCGGCACAGCGGCAGCGCTACGAGCAGTACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 72 bp GGCCCTGCACCAGGTCTCAGGATGGGATCATGCCTTTaGTCCTCTTGCGGTCGGCCATGGTTCTCCGGTTGT +
Preference number: 3 (lower is better)
Translates to: GPAPGLRMGSCL*SSCGRPWFSGC
Trigger: ACAACCGGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAGACCTGGTGCAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp AAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTaGCTGGTAGATGAGAGGCGGCCTTCTCAGGGGCTG +
Preference number: 3 (lower is better)
Translates to: KALCVLQEGAHG*LVDERRPSQGL
Trigger: CAGCCCCTGAGAAGGCCGCCTCTCATCTACCAGCCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR CCA 72 bp GCCGGTACCCTTTCTTGGCGAGAAAGGCCATGCGCCTaGCTTCTGCCTTCTCTCTCAGCACTGCAGGGTCCT +
Preference number: 3 (lower is better)
Translates to: AGTLSWRERPCA*LLPSLSALQGP
Trigger: AGGACCCTGCAGTGCTGAGAGAGAAGGCAGAAGCCAGGCGCATGGCCTTTCTCGCCAAGAAAGGGTACCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CAA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCACTAGGGCGGGAATGTaGTCTTTAGGGGGCGGTTTG +
Preference number: 3 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSTRAGM*SLGGGL
Trigger: CAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGT...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR TCA 72 bp ACCGGTCTGCCTTCTGCTCGGGGTGCTCACAGTCAGTaGGTGGCAGATCCAAGGTCTCCTGTCTTGCTGTCC +
Preference number: 3 (lower is better)
Translates to: TGLPSARGAHSQ*VADPRSPVLLS
Trigger: GGACAGCAAGACAGGAGACCTTGGATCTGCCACTCACTGACTGTGAGCACCCCGAGCAGAAGGCAGACCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453160.5
3UTR GCA 72 bp TTTCCGTCTGTCCACCCCTTCCCATGCACTCTCGACTaGCTGGAGGATGTAGGCAGTCCGCGTCTCGTCCAA +
Preference number: 3 (lower is better)
Translates to: FPSVHPFPCTLD*LEDVGSPRLVQ
Trigger: TTGGACGAGACGCGGACTGCCTACATCCTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGACAGACGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp TATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCATTaGCTACGAAGGTGGCGCGTTCCAGGTACTCCTCCA +
Preference number: 3 (lower is better)
Translates to: YREARPGASRGH*LRRWRVPGTPP
Trigger: TGGAGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
3UTR-3UTR CAA 90 bp CTGGAAGGTCTGGCAAGCCAAAGGGAAGATATCCAGAAAGGCCCAAAGTGTGGTCGAGGTTTGGGGCGCTaGCCTTGGGACTCCATCCCC +
Preference number: 3 (lower is better)
Translates to: LEGLASQREDIQKGPKCGRGLGR*PWDSIP
Trigger: GGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCG...ACCACACTTTGGGCCTTTCTGGATATCTTCCCTTTGGCTTGCCAGACCTTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 72 bp CTGCAGCAAGCTGATGTCTTCGGCCACGGGGAAGAGTaGATCATAGTCCCGGAGGAACCTCTTCTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: LQQADVFGHGEE*IIVPEEPLLLQ
Trigger: CTGCAGGAGAAGAGGTTCCTCCGGGACTATGATGCACTCTTCCCCGTGGCCGAAGACATCAGCTTGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp GTCTGCCTTCTGCTCGGGGTGCTCACAGTCAGTGAGTaGCAGATCCAAGGTCTCCTGTCTTGCTGTCCAGTG +
Preference number: 3 (lower is better)
Translates to: VCLLLGVLTVSE*QIQGLLSCCPV
Trigger: CACTGGACAGCAAGACAGGAGACCTTGGATCTGCCACTCACTGACTGTGAGCACCCCGAGCAGAAGGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453160.5
3UTR GCA 72 bp AGGAAGGTGAGAAAAACACTTCGATGGAGGCGCTTCTaGATGTCAACAACCTCAGGGGCTGAGGCCACCCCC +
Preference number: 3 (lower is better)
Translates to: RKVRKTLRWRRF*MSTTSGAEATP
Trigger: GGGGGTGGCCTCAGCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
3UTR GCA 72 bp GAATGGCCTGCGGCTGATGAGCTCGTCATCAGAGTCTaGATCATTGGCGCCCACCTGGTTGCCATCGTATGT +
Preference number: 3 (lower is better)
Translates to: EWPAADELVIRV*IIGAHLVAIVC
Trigger: ACATACGATGGCAACCAGGTGGGCGCCAATGATGCAGACTCTGATGACGAGCTCATCAGCCGCAGGCCATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp GACGTTGTGGCGAGACGTCAGCAGGGGTGTAGGGTCTaGTTTCATTTCTCAAGGTCTGGCAGCAGGTCCTTC +
Preference number: 3 (lower is better)
Translates to: DVVARRQQGCRV*FHFSRSGSRSF
Trigger: GAAGGACCTGCTGCCAGACCTTGAGAAATGAAACCAGACCCTACACCCCTGCTGACGTCTCGCCACAACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp TCAGCACTGCAGGGTCCTGAACAAAATGGTCGGGCTTaGGAGCCTCCTCGTCAGCATCGTCTTCCTCATCGT +
Preference number: 3 (lower is better)
Translates to: SALQGPEQNGRA*EPPRQHRLPHR
Trigger: ACGATGAGGAAGACGATGCTGACGAGGAGGCTCCCAAGCCCGACCATTTTGTTCAGGACCCTGCAGTGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp TGGTTCTCCGGTTGTGGTTGGCTCTTGTCGCCTTGTTaGCTTCCTTCTTCCTGCGTTCCTGGGTTGTCTCGC +
Preference number: 3 (lower is better)
Translates to: WFSGCGWLLSPC*LPSSCVPGLSR
Trigger: GCGAGACAACCCAGGAACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGAGAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp TTGCTCCTCTTGCGGTCGGCCATGGTTCTCCGGTTGTaGTTGGCTCTTGTCGCCTTGTTGGCTTCCTTCTTC +
Preference number: 3 (lower is better)
Translates to: LLLLRSAMVLRL*LALVALLASFF
Trigger: GAAGAAGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGAGAACCATGGCCGACCGCAAGAGGAGCAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp ATGGGATCATGCCTTTGCTCCTCTTGCGGTCGGCCATaGTTCTCCGGTTGTGGTTGGCTCTTGTCGCCTTGT +
Preference number: 3 (lower is better)
Translates to: MGSCLCSSCGRP*FSGCGWLLSPC
Trigger: ACAAGGCGACAAGAGCCAACCACAACCGGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR TCA 72 bp TCTCGTCCAAGACTGATGAGGCCTGCTGCAGCAAGCTaGTGTCTTCGGCCACGGGGAAGAGTGCATCATAGT +
Preference number: 3 (lower is better)
Translates to: SRPRLMRPAAAS*CLRPRGRVHHS
Trigger: ACTATGATGCACTCTTCCCCGTGGCCGAAGACATCAGCTTGCTGCAGCAGGCCTCATCAGTCTTGGACGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR TCA 72 bp TCCTCTTCCTCCGAGTTCTCCGGATGTGATGATGCTTaGCTGACTGCCTCTGCTGTCACCGTGACCCCGTTA +
Preference number: 3 (lower is better)
Translates to: SSSSEFSGCDDA*LTASAVTVTPL
Trigger: TAACGGGGTCACGGTGACAGCAGAGGCAGTCAGTCAAGCATCATCACATCCGGAGAACTCGGAGGAAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp CCCGTTAGGCTCCCCATTAGGCTCCTCAATCACCGATaGGTCTTTAGCATCTGTGGCTTTCCGTCTGTCCAC +
Preference number: 3 (lower is better)
Translates to: PVRLPIRLLNHR*VFSICGFPSVH
Trigger: GTGGACAGACGGAAAGCCACAGATGCTAAAGACCCATCGGTGATTGAGGAGCCTAATGGGGAGCCTAACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR TCA 72 bp GTCTCGTCAAAGATCACCTGGCACCAGAATTTATCGTaGGGCAAGGCCAGGAGCCAGTCGAGGTCATTGGCT +
Preference number: 3 (lower is better)
Translates to: VSSKITWHQNLS*GKARSQSRSLA
Trigger: AGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTGCCAGGTGATCTTTGACGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
3UTR GCA 72 bp GGCGGTTTGTATAACACAAAATACCGGTCTGCCTTCTaGTCGGGGTGCTCACAGTCAGTGAGTGGCAGATCC +
Preference number: 3 (lower is better)
Translates to: GGLYNTKYRSAF*SGCSQSVSGRS
Trigger: GGATCTGCCACTCACTGACTGTGAGCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGTTATACAAACCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453160.5
3UTR CCA 72 bp AGCTCGTCATCAGAGTCTGCATCATTGGCGCCCACCTaGTTGCCATCGTATGTGTCATCGTACTCATCCTCG +
Preference number: 3 (lower is better)
Translates to: SSSSESASLAPT*LPSYVSSYSSS
Trigger: CGAGGATGAGTACGATGACACATACGATGGCAACCAGGTGGGCGCCAATGATGCAGACTCTGATGACGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CAA 90 bp CGGAGGAAGGTGAGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCACTAGGGCGGGAATGTaGTCTTTAGGGGGCGGTTTG +
Preference number: 3 (lower is better)
Translates to: RRKVRKTLRWRRFCMSTTTRAGM*SLGGGL
Trigger: CAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGT...GGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTCCTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
3UTR-3UTR CAA 90 bp CAGGTCCTTCACTTGGGAGATGAGAGAGTCCAGTTCCACCCCACACATGGCAGGACTCCATTTCGGGAATaGCTGCTTCGTAGAAGGAAG +
Preference number: 3 (lower is better)
Translates to: QVLHLGDERVQFHPTHGRTPFRE*LLRRRK
Trigger: CTTCCTTCTACGAAGCAGCAATTCCCGAAATGGAGT...CCTGCCATGTGTGGGGTGGAACTGGACTCTCTCATCTCCCAAGTGAAGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR TCA 72 bp CCTTGTGCACCCGGCTCAGGTCTACTGAGTCCCTGCTaGACACATCAAACTCGTCATTCTGGAAGACGTTGT +
Preference number: 3 (lower is better)
Translates to: PCAPGSGLLSPC*THQTRHSGRRC
Trigger: ACAACGTCTTCCAGAATGACGAGTTTGATGTGTTCAGCAGGGACTCAGTAGACCTGAGCCGGGTGCACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 72 bp TATAACACAAAATACCGGTCTGCCTTCTGCTCGGGGTaGTCACAGTCAGTGAGTGGCAGATCCAAGGTCTCC +
Preference number: 3 (lower is better)
Translates to: YNTKYRSAFCSG*SQSVSGRSKVS
Trigger: GGAGACCTTGGATCTGCCACTCACTGACTGTGAGCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453160.5
3UTR GCA 72 bp CGTCATCAGAGTCTGCATCATTGGCGCCCACCTGGTTaGCATCGTATGTGTCATCGTACTCATCCTCGTAGT +
Preference number: 3 (lower is better)
Translates to: RHQSLHHWRPPG*HRMCHRTHPRS
Trigger: ACTACGAGGATGAGTACGATGACACATACGATGGCAACCAGGTGGGCGCCAATGATGCAGACTCTGATGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp CTGAACACATCAAACTCGTCATTCTGGAAGACGTTGTaGCGAGACGTCAGCAGGGGTGTAGGGTCTGGTTTC +
Preference number: 3 (lower is better)
Translates to: LNTSNSSFWKTL*RDVSRGVGSGF
Trigger: GAAACCAGACCCTACACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp ACTGAGTCCCTGCTGAACACATCAAACTCGTCATTCTaGAAGACGTTGTGGCGAGACGTCAGCAGGGGTGTA +
Preference number: 3 (lower is better)
Translates to: TESLLNTSNSSF*KTLWRDVSRGV
Trigger: TACACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTTCAGCAGGGACTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CAA 90 bp ATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCATTGGCTACGAAGGTGGTCTTTAGGGGGCGGTTaGTATAACACAAAATACCGG +
Preference number: 3 (lower is better)
Translates to: IYREARPGASRGHWLRRWSLGGG*YNTKYR
Trigger: CCGGTATTTTGTGTTATACAAACCGCCCCCTAAAGA...CCACCTTCGTAGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
3UTR CCA 72 bp TTTCATTTCTCAAGGTCTGGCAGCAGGTCCTTCACTTaGGAGATGAGAGAGTCCAGTTCCACCCCACACATG +
Preference number: 3 (lower is better)
Translates to: FHFSRSGSRSFT*EMRESSSTPHM
Trigger: CATGTGTGGGGTGGAACTGGACTCTCTCATCTCCCAAGTGAAGGACCTGCTGCCAGACCTTGAGAAATGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR-3UTR CAA 90 bp GGTAGGAGTCCAGGCACTTCTGTAGAGTCTCGTCAAAGATCACCTGGCACCAGATCTTTAGGGGGCGGTTaGTATAACACAAAATACCGG +
Preference number: 3 (lower is better)
Translates to: GRSPGTSVESRQRSPGTRSLGGG*YNTKYR
Trigger: CCGGTATTTTGTGTTATACAAACCGCCCCCTAAAGA...TCTGGTGCCAGGTGATCTTTGACGAGACTCTACAGAAGTGCCTGGACTCCTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
3UTR TCA 72 bp CTTTGGATTCCTTGTGAGTGGACATGCGGAGGAAGGTaGGAAAAACACTTCGATGGAGGCGCTTCTGCATGT +
Preference number: 3 (lower is better)
Translates to: LWIPCEWTCGGR*EKHFDGGASAC
Trigger: ACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTCCTCCGCATGTCCACTCACAAGGAATCCAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 72 bp ATCTCCATTAGCTTCTTCCTGGAATGGGAGAGCCTCTaGCACAGGTCACCAAGAAGCTTGCTATCTTCAAGC +
Preference number: 3 (lower is better)
Translates to: ISISFFLEWESL*HRSPRSLLSSS
Trigger: GCTTGAAGATAGCAAGCTTCTTGGTGACCTGTGGCAGAGGCTCTCCCATTCCAGGAAGAAGCTAATGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR GCA 72 bp AGATGTTTCCTATCATCTTCTGGAGCAGTGGTGAGTTaGCTTTTCCAAAGAGCACGCAGAGGTCCAGGATCT +
Preference number: 3 (lower is better)
Translates to: RCFLSSSGAVVS*LFQRARRGPGS
Trigger: AGATCCTGGACCTCTGCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGAAACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp ATGATGTGGAAAATCTCCATTAGCTTCTTCCTGGAATaGGAGAGCCTCTGCCACAGGTCACCAAGAAGCTTG +
Preference number: 3 (lower is better)
Translates to: MMWKISISFFLE*ESLCHRSPRSL
Trigger: CAAGCTTCTTGGTGACCTGTGGCAGAGGCTCTCCCATTCCAGGAAGAAGCTAATGGAGATTTTCCACATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR TCA 72 bp TGTAAAGATGTTTCCTATCATCTTCTGGAGCAGTGGTaGGTTGCCTTTTCCAAAGAGCACGCAGAGGTCCAG +
Preference number: 3 (lower is better)
Translates to: CKDVSYHLLEQW*VAFSKEHAEVQ
Trigger: CTGGACCTCTGCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGAAACATCTTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp AAGCCAAAGGGAAGATATCCAGAAAGGCCCAAAGTGTaGTGCAGGTATCACAAAGGTAGAGAACAATGTCCT +
Preference number: 3 (lower is better)
Translates to: KPKGRYPERPKV*CRYHKGREQCP
Trigger: AGGACATTGTTCTCTACCTTTGTGATACCTGCACCACACTTTGGGCCTTTCTGGATATCTTCCCTTTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CCA 72 bp GCCTTTTCCAAAGAGCACGCAGAGGTCCAGGATCTTTaGAATGTCAAAGAGGAAGTTATTGTAGAGGATTTC +
Preference number: 3 (lower is better)
Translates to: AFSKEHAEVQDL*NVKEEVIVEDF
Trigger: GAAATCCTCTACAATAACTTCCTCTTTGACATTCCAAAGATCCTGGACCTCTGCGTGCTCTTTGGAAAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGACGGTGACAGCTCCCTaGGCGCCCGCACTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWTVTAP*APALPG
Trigger: CCCCGGAAGTGCGGGCGCTCAGGGAGCTGTCACCGT...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGGCAGCTGGGGGAAGGTaGCTGCTTGCCGGCCCCACG +
Preference number: 4 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWAAGGR*LLAGPT
Trigger: CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGC...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCAGGCTCTCGCCTGGCTaGAGTGGCACCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPRLSPG*SGTSST
Trigger: GGTGGAGGAGGTGCCACTGCAGCCAGGCGAGAGCCT...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGTTGTCTCGCGGCTCTaGCCATGGCCTCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSVVSRL*PWPRGL
Trigger: CAGCCCCCGAGGCCATGGGCAGAGCCGCGAGACAAC...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCCCGCTGCCTCCCCACTaGCCCTGCACCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PHLFPASAAGGRCLLAGPPLPPH*PCTRSQ
Trigger: CTGAGACCTGGTGCAGGGCCAGTGGGGAGGCAGCGG...GGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCACGCCGCCGACCACGGTaGCAGCTCCCTGAGCGCCCG +
Preference number: 4 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPRRRPR*QLPERP
Trigger: CGGGCGCTCAGGGAGCTGTCACCGTGGTCGGCGGCG...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR TCA 90 bp AGGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCTGCTGCAGCAAGCTaGTGTCTTCGGCCACGGGGA +
Preference number: 4 (lower is better)
Translates to: RRPQAMGARPGESGAAASPAAAS*CLRPRG
Trigger: TCCCCGTGGCCGAAGACATCAGCTTGCTGCAGCAGG...GGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCGTCCACCCCTTCCCATaGACTCTCGACTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPVHPFP*TLDCLE
Trigger: CTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGAC...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCCTTCCTGGTGCTCTTaGCCTTGTGCACCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPPSWCS*PCAPGS
Trigger: TGAGCCGGGTGCACAAGGGCAAGAGCACCAGGAAGG...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGGTTGTCTCGCGGCTCTaGCCATGGCCTCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLVVSRL*PWPRGL
Trigger: CAGCCCCCGAGGCCATGGGCAGAGCCGCGAGACAAC...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTGCAGCTGGGGGAAGGTaGCTGCTTGCCGGCCCCACG +
Preference number: 4 (lower is better)
Translates to: FPLAQLGEGACLPAPRILAAGGR*LLAGPT
Trigger: CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGC...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGCCGCTGCCTCCCCACTaGCCCTGCACCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: HLFPASAAGGRCLLAGPTPLPPH*PCTRSQ
Trigger: CTGAGACCTGGTGCAGGGCCAGTGGGGAGGCAGCGG...CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGCCGCTGCCTCCCCACTaGCCCTGCACCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLPLPPH*PCTRSQ
Trigger: CTGAGACCTGGTGCAGGGCCAGTGGGGAGGCAGCGG...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGACGGTGACAGCTCCCTaGGCGCCCGCACTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRTVTAP*APALPG
Trigger: CCCCGGAAGTGCGGGCGCTCAGGGAGCTGTCACCGT...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR TCA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCAACGGTGACAGCTCCCTaGGCGCCCGCACTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GEGACLPAPRILRLWHKATVTAP*APALPG
Trigger: CCCCGGAAGTGCGGGCGCTCAGGGAGCTGTCACCGT...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR TCA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGCCTGCTGCAGCAAGCTaGTGTCTTCGGCCACGGGGA +
Preference number: 4 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSPAAAS*CLRPRG
Trigger: TCCCCGTGGCCGAAGACATCAGCTTGCTGCAGCAGG...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTTGCGGTCCAGCTGGCTaGGGGTGGGGGCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSCGPAG*GWGPAA
Trigger: AGCGGCTGGCCCCCACCCTCAGCCAGCTGGACCGCA...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR TCA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTGCGGTCCAGCTGGCTaGGGGTGGGGGCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: WCLVARGLGRLPWDSIPICGPAG*GWGPAA
Trigger: AGCGGCTGGCCCCCACCCTCAGCCAGCTGGACCGCA...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR TCA 90 bp CCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCTGGCTGGCTGGTAGATaGGAGGCGGCCTTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PHLFPASAAGGRCLLAGPWLAGR*EAAFSG
Trigger: CCCTGAGAAGGCCGCCTCTCATCTACCAGCCAGCCA...GGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCAGTAGCGCTGCCGCTGTaGCGCCACTGCACGCTTGTC +
Preference number: 4 (lower is better)
Translates to: PISFPLAQLGEGACLPAPVALPL*RHCTLV
Trigger: GACAAGCGTGCAGTGGCGGCACAGCGGCAGCGCTAC...TGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACCTCCCCACTGGCCCTaGACCAGGTCTCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: PISFPLAQLGEGACLPAPPPHWP*TRSQDG
Trigger: CCCATCCTGAGACCTGGTGCAGGGCCAGTGGGGAGG...TGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCGGGAAGGTGCCTGCTTaGCGGCCCCACGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: PHLFPASAAGGRCLLAGPGKVPA*RPHGFF
Trigger: GAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC...GGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGGGAGAGGCATGTCACTaGGGGTCAATCGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWGEACH*GSIGPS
Trigger: AGAGGGGCCGATTGACCCCCAGTGACATGCCTCTCC...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AGGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCGCCGGTACCCTTTCTTaGCGAGAAAGGCCATGCGCC +
Preference number: 4 (lower is better)
Translates to: RRPQAMGARPGESGAAASAGTLS*RERPCA
Trigger: GGCGCATGGCCTTTCTCGCCAAGAAAGGGTACCGGC...GGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGAACAACCTCAGGGGCTaGGGCCACCCCCTCGTCGAA +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLNNLRG*GHPLVE
Trigger: TTCGACGAGGGGGTGGCCTCAGCCCCTGAGGTTGTT...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTTGCGGTCCAGCTGGCTaGGGGTGGGGGCCAGCCGCT +
Preference number: 4 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALCGPAG*GWGPAA
Trigger: AGCGGCTGGCCCCCACCCTCAGCCAGCTGGACCGCA...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR TCA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGCCGGCTCAGGTCTACTaGGTCCCTGCTGAACACATC +
Preference number: 4 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWPAQVY*VPAEHI
Trigger: GATGTGTTCAGCAGGGACTCAGTAGACCTGAGCCGG...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TCCTTCTTCCTGCGTTCCTGGGTTGTCTCGCGGCTCTGCCCATGGCCTCGGGGGGCCGGCCACTGCTGTTaGGCTGTCATGCCGGTACCC +
Preference number: 4 (lower is better)
Translates to: SFFLRSWVVSRLCPWPRGAGHCC*AVMPVP
Trigger: GGGTACCGGCATGACAGCTCAACAGCAGTGGCCGGC...CCCCCGAGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAAGGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACAAAATACCGGTCTaGCTTCTGCTCGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPHKIPV*LLLGVQ
Trigger: CTGCACCCCGAGCAGAAGGCAGACCGGTATTTTGTG...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307790.8
ENST00000397771.6
CDS-3UTR GCA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGGTGCTCTTGCCCTTGTaGACCCGGCTCAGGTCTACT +
Preference number: 4 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWVLLPL*TRLRST
Trigger: AGTAGACCTGAGCCGGGTGCACAAGGGCAAGAGCAC...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTAGGCTCTCGCCTGGCTaGAGTGGCACCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: FPLAQLGEGACLPAPRILRLSPG*SGTSST
Trigger: GGTGGAGGAGGTGCCACTGCAGCCAGGCGAGAGCCT...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGTGGCGAGAAAGGCCATaGGCCTGGCTTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWWRERP*AWLLPS
Trigger: AGAAGGCAGAAGCCAGGCGCATGGCCTTTCTCGCCA...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGGAGCTGGCATTGTGCTaGGTGACCCTCCTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWELALC*VTLLFQ
Trigger: CTGGAACAGGAGGGTCACGCAGCACAATGCCAGCTC...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CCA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCAGCTTCTTCCTGGAATaGGAGAGCCTCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPSFFLE*ESLCHR
Trigger: CCTGTGGCAGAGGCTCTCCCATTCCAGGAAGAAGCT...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TCCTTCTTCCTGCGTTCCTGGGTTGTCTCGCGGCTCTGCCCATGGCCTCGGGGGCTCGCCTGGCTGCAGTaGCACCTCCTCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: SFFLRSWVVSRLCPWPRGLAWLQ*HLLHHH
Trigger: GTGGTGGTGGAGGAGGTGCCACTGCAGCCAGGCGAG...CCCCCGAGGCCATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp AGGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCTTCTTCCTGCGTTCCTaGGTTGTCTCGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RRPQAMGARPGESGAAASFFLRS*VVSRLC
Trigger: GCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAA...GGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGAAGGCGCTCATGGCTaGCTGGTAGATGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSEGAHG*LVDERR
Trigger: CCGCCTCTCATCTACCAGCCAGCCATGAGCGCCTTC...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGTGGCATTGTGCTGCGTaGCCCTCCTCGGCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRWHCAA*PSSAAP
Trigger: TGGAGCCGCCGAGGAGGGTCACGCAGCACAATGCCA...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307790.8
ENST00000542393.5
CDS-3UTR TCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACGCCGGCCACTGCTGTTaGGCTGTCATGCCGGTACCC +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHAGHCC*AVMPVP
Trigger: GGGTACCGGCATGACAGCTCAACAGCAGTGGCCGGC...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCGAGCTGGCATTGTGCTaGGTGACCCTCCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACELALC*VTLLGG
Trigger: GCCGCCGAGGAGGGTCACGCAGCACAATGCCAGCTC...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307790.8
ENST00000542393.5
CDS-3UTR GCA 90 bp CATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGTCCACCCCTTCCCATaGACTCTCGACTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HLFPASAAGGRCLLAGPTVHPFP*TLDCLE
Trigger: CTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGAC...CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCGTGCTCTTGCCCTTGTaGACCCGGCTCAGGTCTACT +
Preference number: 4 (lower is better)
Translates to: PHLFPASAAGGRCLLAGPVLLPL*TRLRST
Trigger: AGTAGACCTGAGCCGGGTGCACAAGGGCAAGAGCAC...GGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGCCTTCCTGGTGCTCTTaGCCTTGTGCACCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: HLFPASAAGGRCLLAGPTPSWCS*PCAPGS
Trigger: TGAGCCGGGTGCACAAGGGCAAGAGCACCAGGAAGG...CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGCCGCTGTGCCGCCACTaGACGCTTGTCGTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: HLFPASAAGGRCLLAGPTPLCRH*TLVVQQ
Trigger: TTGCTGAACGACAAGCGTGCAGTGGCGGCACAGCGG...CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCAGTAGCGCTGCCGCTGTaGCGCCACTGCACGCTTGTC +
Preference number: 4 (lower is better)
Translates to: GEGACLPAPRILRLWHKAVALPL*RHCTLV
Trigger: GACAAGCGTGCAGTGGCGGCACAGCGGCAGCGCTAC...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCGTTGTCTCGCGGCTCTaGCCATGGCCTCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: WCLVARGLGRLPWDSIPIVVSRL*PWPRGL
Trigger: CAGCCCCCGAGGCCATGGGCAGAGCCGCGAGACAAC...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGTGGCTTCCTTCTTCCTaGGTTCCTGGGTTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWWLPSS*VPGLSR
Trigger: GCGAGACAACCCAGGAACGCAGGAAGAAGGAAGCCA...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGGCCTTCTCAGGGGCTaGAAAGCTGAGGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSGLLRG*KAEAVE
Trigger: CTCAACAGCCTCAGCTTTGCAGCCCCTGAGAAGGCC...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCCTGGGGGAAGGTGCCTaGTTGCCGGCCCCACGGATT +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACLGEGA*LPAPRI
Trigger: AATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAG...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGGCAGCTGGGGGAAGGTaGCTGCTTGCCGGCCCCACG +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRAAGGR*LLAGPT
Trigger: CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGC...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCAGTTCCACCCCACACATaGCAGGGCCCACAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPVPPHT*QGPQPR
Trigger: CCGCGGCTGTGGGCCCTGCCATGTGTGGGGTGGAAC...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCGTTCCACCCCACACATaGCAGGGCCCACAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: WCLVARGLGRLPWDSIPIVPPHT*QGPQPR
Trigger: CCGCGGCTGTGGGCCCTGCCATGTGTGGGGTGGAAC...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGCTGAGGGATGGTGAATaGCCTGCGGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSLRDGE*PAADEL
Trigger: GAGCTCATCAGCCGCAGGCCATTCACCATCCCTCAG...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCTTCTCCGGTTGTGGTTaGCTCTTGTCGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPFSGCG*LLSPCW
Trigger: CCAACAAGGCGACAAGAGCCAACCACAACCGGAGAA...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTTGTGGCCCGAGGTTTaGGGCGCTTGCCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLLWPEV*GACLGT
Trigger: AGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCTGGCATTGTGCTGCGTaGCCCTCCTCGGCGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GSGVLWPEVWGACLGTPSWHCAA*PSSAAP
Trigger: TGGAGCCGCCGAGGAGGGTCACGCAGCACAATGCCA...GGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307790.8
ENST00000542393.5
CDS-3UTR TCA 90 bp CATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGCCGGCTCAGGTCTACTaGGTCCCTGCTGAACACATC +
Preference number: 4 (lower is better)
Translates to: HLFPASAAGGRCLLAGPTPAQVY*VPAEHI
Trigger: GATGTGTTCAGCAGGGACTCAGTAGACCTGAGCCGG...CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCATACCGGTCTGCCTTCTaGTCGGGGTGCAGCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GEGACLPAPRILRLWHKAYRSAF*SGCSAG
Trigger: ACCAGCGCTGCACCCCGAGCAGAAGGCAGACCGGTA...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307790.8
ENST00000397771.6
CDS-3UTR GCA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGCGATGGAGGCGCTTCTaGATGTCAACAACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSRWRRF*MSTTSG
Trigger: CCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCG...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCGAATGGGAGAGCCTCTaGCACAGGTCACCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: PHLFPASAAGGRCLLAGPEWESL*HRSPRS
Trigger: GCTTCTTGGTGACCTGTGGCAGAGGCTCTCCCATTC...GGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGTTGACTGACTGCCTCTaGTGTCACCGTGACCCCGTT +
Preference number: 4 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSLTDCL*CHRDPV
Trigger: AACGGGGTCACGGTGACAGCAGAGGCAGTCAGTCAA...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCCCGCGGCTGCTCCCATaGACTCCTCTTCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACPRLLP*TPLPPS
Trigger: ACTCGGAGGAAGAGGAGTGCATGGGAGCAGCCGCGG...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACCCGCGGCTGCTCCCATaGACTCCTCTTCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHPRLLP*TPLPPS
Trigger: ACTCGGAGGAAGAGGAGTGCATGGGAGCAGCCGCGG...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACCGCGGCTGCTCCCATaGACTCCTCTTCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GEGACLPAPRILRLWHKAPRLLP*TPLPPS
Trigger: ACTCGGAGGAAGAGGAGTGCATGGGAGCAGCCGCGG...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGGTGCTCTTGCCCTTGTaGACCCGGCTCAGGTCTACT +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLVLLPL*TRLRST
Trigger: AGTAGACCTGAGCCGGGTGCACAAGGGCAAGAGCAC...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCAGTAGCGCTGCCGCTGTaGCGCCACTGCACGCTTGTC +
Preference number: 4 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPVALPL*RHCTLV
Trigger: GACAAGCGTGCAGTGGCGGCACAGCGGCAGCGCTAC...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCAGGCTCTCGCCTGGCTaGAGTGGCACCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GSGVLWPEVWGACLGTPSRLSPG*SGTSST
Trigger: GGTGGAGGAGGTGCCACTGCAGCCAGGCGAGAGCCT...GGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGCATGGCCTCGGGGGCTaGCGGCCACTGCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRHGLGG*RPLLLS
Trigger: GCTCAACAGCAGTGGCCGGCAGCCCCCGAGGCCATG...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCATGGCCTCGGGGGCTaGCGGCCACTGCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVHGLGG*RPLLLS
Trigger: GCTCAACAGCAGTGGCCGGCAGCCCCCGAGGCCATG...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCATGCCTTTGCTCCTCTTaGGGTCGGCCATGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: PISFPLAQLGEGACLPAPCLCSS*GRPWFS
Trigger: GGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCA...TGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGGGCCTTCTCAGGGGCTaGAAAGCTGAGGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLGLLRG*KAEAVE
Trigger: CTCAACAGCCTCAGCTTTGCAGCCCCTGAGAAGGCC...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGGTTCCACCCCACACATaGCAGGGCCCACAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRVPPHT*QGPQPR
Trigger: CCGCGGCTGTGGGCCCTGCCATGTGTGGGGTGGAAC...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGAGGTTGCGGTCCAGCTaGCTGAGGGTGGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWRLRSS*LRVGAS
Trigger: GCTGGCCCCCACCCTCAGCCAGCTGGACCGCAACCT...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR CCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACAGGTTGCGGTCCAGCTaGCTGAGGGTGGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDRLRSS*LRVGAS
Trigger: GCTGGCCCCCACCCTCAGCCAGCTGGACCGCAACCT...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGTTCTGGAAGACGTTGTaGCGAGACGTCAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSFWKTL*RDVSRG
Trigger: ACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAA...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCCTCGCCTGGCTGCAGTaGCACCTCCTCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: WCLVARGLGRLPWDSIPILAWLQ*HLLHHH
Trigger: GTGGTGGTGGAGGAGGTGCCACTGCAGCCAGGCGAG...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCTCGCCTGGCTGCAGTaGCACCTCCTCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: GKWCLVARGLGRLPWDSILAWLQ*HLLHHH
Trigger: GTGGTGGTGGAGGAGGTGCCACTGCAGCCAGGCGAG...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCCAGAGTCTGCATCATTaGCGCCCACCTGGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: PHLFPASAAGGRCLLAGPQSLHH*RPPGCH
Trigger: ATGGCAACCAGGTGGGCGCCAATGATGCAGACTCTG...GGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTGCCGGTACCCTTTCTTaGCGAGAAAGGCCATGCGCC +
Preference number: 4 (lower is better)
Translates to: FPLAQLGEGACLPAPRILAGTLS*RERPCA
Trigger: GGCGCATGGCCTTTCTCGCCAAGAAAGGGTACCGGC...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCTCTTGTCGCCTTGTTaGCTTCCTTCTTCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPLLSPC*LPSSCV
Trigger: AACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAG...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGCACCAGGTCTCAGGATaGGATCATGCCTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWHQVSG*DHAFAP
Trigger: AGGAGCAAAGGCATGATCCCATCCTGAGACCTGGTG...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGAGGGTAAAGGGGAAGTaGTGTCTTGTGGCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSRVKGK*CLVARG
Trigger: ACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR CAA 72 bp TCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTaGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAG +
Preference number: 4 (lower is better)
Translates to: SFPLAQLGEGAC*PAPRILRLWHK
Trigger: CTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR CAA 72 bp TCTGCCCATGGCCTCGGGGGCTGCCGGCCACTGCTGTaGAGCTGTCATGCCGGTACCCTTTCTTGGCGAGAA +
Preference number: 4 (lower is better)
Translates to: SAHGLGGCRPLL*SCHAGTLSWRE
Trigger: TTCTCGCCAAGAAAGGGTACCGGCATGACAGCTCAACAGCAGTGGCCGGCAGCCCCCGAGGCCATGGGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTCGGGTCCTTGTGGGTaGTCTGGAGTTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACSGPCG*SGVGPG
Trigger: CCCTGGACCAACTCCAGATCACCCACAAGGACCCGA...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTAACAACCTCAGGGGCTaGGGCCACCCCCTCGTCGAA +
Preference number: 4 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSNNLRG*GHPLVE
Trigger: TTCGACGAGGGGGTGGCCTCAGCCCCTGAGGTTGTT...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCAACAACCTCAGGGGCTaGGGCCACCCCCTCGTCGAA +
Preference number: 4 (lower is better)
Translates to: GKWCLVARGLGRLPWDSINNLRG*GHPLVE
Trigger: TTCGACGAGGGGGTGGCCTCAGCCCCTGAGGTTGTT...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCATATTGCTGAAGACCTaGAGGATGGTAGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPILLKT*RMVGRV
Trigger: AACCCTGCCTACCATCCTTCAGGTCTTCAGCAATAT...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCCGCCGGCCACTGCTGTTaGGCTGTCATGCCGGTACCC +
Preference number: 4 (lower is better)
Translates to: LWPEVWGACLGTPSPSLSAGHCC*AVMPVP
Trigger: GGGTACCGGCATGACAGCTCAACAGCAGTGGCCGGC...GGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGTTGGCCCCGTCCCCTTaGAAACCACAGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRLAPSP*KPQCWR
Trigger: CCTCCAGCACTGTGGTTTGCAAGGGGACGGGGCCAA...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGGCCCCGTCCCCTTaGAAACCACAGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACLAPSP*KPQCWR
Trigger: CCTCCAGCACTGTGGTTTGCAAGGGGACGGGGCCAA...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCTCCATTTCGGGAATTaGTGCTTCGTAGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPLHFGN*CFVEGS
Trigger: GCTTCCTTCTACGAAGCAGCAATTCCCGAAATGGAG...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGAGGAACCTCTTCTCCTaGAGCAAGGAGCTGAAGATC +
Preference number: 4 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWRNLFS*SKELKI
Trigger: GATCTTCAGCTCCTTGCTGCAGGAGAAGAGGTTCCT...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACTGATGAGGCCTGCTaGAGCAAGCTGATGTCTTCG +
Preference number: 4 (lower is better)
Translates to: PHLFPASAAGGRCLLAGPTDEAC*SKLMSS
Trigger: CGAAGACATCAGCTTGCTGCAGCAGGCCTCATCAGT...GGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACGCCCACAGCCGCGGCTaGTCCCATGCACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDAHSRG*SHALLF
Trigger: GAAGAGGAGTGCATGGGAGCAGCCGCGGCTGTGGGC...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCGCCCACCTGGTTaGCATCGTATGTGTCATCGT +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLWRPPG*HRMCHR
Trigger: ACGATGACACATACGATGGCAACCAGGTGGGCGCCA...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGCTCGTCATCAGAGTCTaGATCATTGGCGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLLVIRV*IIGAHL
Trigger: CAGGTGGGCGCCAATGATGCAGACTCTGATGACGAG...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGCATGGCCTCGGGGGCTaGCGGCCACTGCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQHGLGG*RPLLLS
Trigger: GCTCAACAGCAGTGGCCGGCAGCCCCCGAGGCCATG...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCCCCTCCCCACTGGCCCTaGACCAGGTCTCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: LWPEVWGACLGTPSPSLSPPHWP*TRSQDG
Trigger: CCCATCCTGAGACCTGGTGCAGGGCCAGTGGGGAGG...GGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCAAGGCACTGTGTGTTCTaGAGGAAGGCGCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: PISFPLAQLGEGACLPAPRHCVF*RKALMA
Trigger: AGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCT...TGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTGGGAAGGTGCCTGCTTaGCGGCCCCACGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSGKVPA*RPHGFF
Trigger: GAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGCTGGGGGAAGGTGCCTaGTTGCCGGCCCCACGGATT +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRLGEGA*LPAPRI
Trigger: AATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAG...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACGAGGTTTGGGGCGCTTaGCTTGGGACTCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHEVWGA*LGTPSP
Trigger: TGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTC...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCTCTCCTCAAGCTTCTaGGGTGTGGTATTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: FPLAQLGEGACLPAPRILLSSSF*GVVLAP
Trigger: CGGGGCCAATACCACACCCCAGAAGCTTGAGGAGAG...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCGGAGAGGCATGTCACTaGGGGTCAATCGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACGEACH*GSIGPS
Trigger: AGAGGGGCCGATTGACCCCCAGTGACATGCCTCTCC...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCAAAAGTCGTGCTTCTaGAAGGTCTGGCAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPQKSCF*KVWQAK
Trigger: TTTGGCTTGCCAGACCTTCCAGAAGCACGACTTTTG...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AGGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCAGCAGGTCCTTCACTTaGGAGATGAGAGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RRPQAMGARPGESGAAASSRSFT*EMRESS
Trigger: ACTGGACTCTCTCATCTCCCAAGTGAAGGACCTGCT...GGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTAGGTTGCGGTCCAGCTaGCTGAGGGTGGGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SCGPRFGALALGLHPHLFRLRSS*LRVGAS
Trigger: GCTGGCCCCCACCCTCAGCCAGCTGGACCGCAACCT...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR CCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGGAAAGGCCATGCGCCTaGCTTCTGCCTTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLERPCA*LLPSLS
Trigger: TGAGAGAGAAGGCAGAAGCCAGGCGCATGGCCTTTC...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTTTCTTCCTGCGTTCCTaGGTTGTCTCGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FPLAQLGEGACLPAPRILFFLRS*VVSRLC
Trigger: GCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAA...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GACTGCCTCTGCTGTCACCGTGACCCCGTTAGGCTCCCCATTAGGCTCCTCAATCCGCTGCCTCCCCACTaGCCCTGCACCAGGTCTCAG +
Preference number: 4 (lower is better)
Translates to: DCLCCHRDPVRLPIRLLNPLPPH*PCTRSQ
Trigger: CTGAGACCTGGTGCAGGGCCAGTGGGGAGGCAGCGG...ATTGAGGAGCCTAATGGGGAGCCTAACGGGGTCACGGTGACAGCAGAGGCAGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGTGGCCCGAGGTTTaGGGCGCTTGCCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACLWPEV*GACLGT
Trigger: AGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCACCAGAATTTATCGTaGGGCAAGGCCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: FPLAQLGEGACLPAPRILHQNLS*GKARSQ
Trigger: CTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTG...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR TCA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGGCCGGCCACTGCTGTTaGGCTGTCATGCCGGTACCC +
Preference number: 4 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWAGHCC*AVMPVP
Trigger: GGGTACCGGCATGACAGCTCAACAGCAGTGGCCGGC...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGTGGCTGGCTGGTAGATaGGAGGCGGCCTTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWWLAGR*EAAFSG
Trigger: CCCTGAGAAGGCCGCCTCTCATCTACCAGCCAGCCA...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGGAGCTGGCATTGTGCTaGGTGACCCTCCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWELALC*VTLLGG
Trigger: GCCGCCGAGGAGGGTCACGCAGCACAATGCCAGCTC...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307790.8
ENST00000542393.5
CDS-3UTR GCA 90 bp TTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCCGCAGAGCTGGCATTGTaGTGCGTGACCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: LWPEVWGACLGTPSPSLSAELAL*CVTLLG
Trigger: GCCGAGGAGGGTCACGCAGCACAATGCCAGCTCTGC...GGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307790.8
ENST00000542393.5
CDS-3UTR GCA 90 bp CATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGGAGCAGTGGTGAGTTaGCTTTTCCAAAGAGCACGC +
Preference number: 4 (lower is better)
Translates to: HLFPASAAGGRCLLAGPTGAVVS*LFQRAR
Trigger: GCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCC...CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AGGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCTTGCAAACCACAGTaGTGGAGGATATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RRPQAMGARPGESGAAASPCKPQ*WRILLK
Trigger: CTTCAGCAATATCCTCCAGCACTGTGGTTTGCAAGG...GGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACGGCCACGGGGAAGAGTaGATCATAGTCCCGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHGHGEE*IIVPEE
Trigger: TTCCTCCGGGACTATGATGCACTCTTCCCCGTGGCC...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCAGTCCACCCCTTCCCATaGACTCTCGACTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPVHPFP*TLDCLE
Trigger: CTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGAC...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACCCGCGGCTGCTCCCATaGACTCCTCTTCCTCCGAGT +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDPRLLP*TPLPPS
Trigger: ACTCGGAGGAAGAGGAGTGCATGGGAGCAGCCGCGG...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGCCCACAGCCGCGGCTaGTCCCATGCACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQAHSRG*SHALLF
Trigger: GAAGAGGAGTGCATGGGAGCAGCCGCGGCTGTGGGC...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCACCTTCCTGGTGCTCTTaGCCTTGTGCACCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPPSWCS*PCAPGS
Trigger: TGAGCCGGGTGCACAAGGGCAAGAGCACCAGGAAGG...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCACCGCTGTGCCGCCACTaGACGCTTGTCGTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPPLCRH*TLVVQQ
Trigger: TTGCTGAACGACAAGCGTGCAGTGGCGGCACAGCGG...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTTGGCGCCCACCTGGTTaGCATCGTATGTGTCATCGT +
Preference number: 4 (lower is better)
Translates to: FPLAQLGEGACLPAPRILWRPPG*HRMCHR
Trigger: ACGATGACACATACGATGGCAACCAGGTGGGCGCCA...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGGCGAGAAAGGCCATaGGCCTGGCTTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHWRERP*AWLLPS
Trigger: AGAAGGCAGAAGCCAGGCGCATGGCCTTTCTCGCCA...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGGTTGTCTCGCGGCTCTaGCCATGGCCTCGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LLLGVASFQTVEPVGTTRVVSRL*PWPRGL
Trigger: CAGCCCCCGAGGCCATGGGCAGAGCCGCGAGACAAC...CCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCATGCCTTTGCTCCTCTTaGGGTCGGCCATGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GEGACLPAPRILRLWHKACLCSS*GRPWFS
Trigger: GGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCA...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGCCTCCCCACTGGCCCTaGACCAGGTCTCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQPPHWP*TRSQDG
Trigger: CCCATCCTGAGACCTGGTGCAGGGCCAGTGGGGAGG...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AGCCAGTCGAGGTCATTGGCTACGAAGGTGGCGCGTTCCAGGTACTCCTCCACTCCTCCCCACTGGCCCTaGACCAGGTCTCAGGATGGG +
Preference number: 4 (lower is better)
Translates to: SQSRSLATKVARSRYSSTPPHWP*TRSQDG
Trigger: CCCATCCTGAGACCTGGTGCAGGGCCAGTGGGGAGG...AGTGGAGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACGGGAAGGTGCCTGCTTaGCGGCCCCACGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDGKVPA*RPHGFF
Trigger: GAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGCTGGGGGAAGGTGCCTaGTTGCCGGCCCCACGGATT +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQLGEGA*LPAPRI
Trigger: AATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAG...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACGCAGAGCTGGCATTGTaGTGCGTGACCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHAELAL*CVTLLF
Trigger: GAACAGGAGGGTCACGCAGCACAATGCCAGCTCTGC...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CCA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCTGGGTGATCTGGAGTTaGTCCAGGGGCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSWVIWS*SRGRAG
Trigger: GCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCA...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GCCAGGAGCCAGTCGAGGTCATTGGCTACGAAGGTGGCGCGTTCCAGGTACTCCTGGGTGATCTGGAGTTaGTCCAGGGGCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: ARSQSRSLATKVARSRYSWVIWS*SRGRAG
Trigger: GCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCA...GGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCTCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp GGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCTGGGTGATCTGGAGTTaGTCCAGGGGCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSGVLWPEVWGACLGTPSWVIWS*SRGRAG
Trigger: GCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCA...GGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCGCCAGTCGAGGTCATTaGCTACGAAGGTGGCGCGTT +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACASRGH*LRRWRV
Trigger: AACGCGCCACCTTCGTAGCCAATGACCTCGACTGGC...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CCA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCTTTCCTATCATCTTCTaGAGCAGTGGTGAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPFPIIF*SSGELP
Trigger: AGGCAACTCACCACTGCTCCAGAAGATGATAGGAAA...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AGGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCTGCAAACCACAGTGCTaGAGGATATTGCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: RRPQAMGARPGESGAAASCKPQC*RILLKT
Trigger: GGTCTTCAGCAATATCCTCCAGCACTGTGGTTTGCA...GGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCGGAGAGGCATGTCACTaGGGGTCAATCGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GSGVLWPEVWGACLGTPSGEACH*GSIGPS
Trigger: AGAGGGGCCGATTGACCCCCAGTGACATGCCTCTCC...GGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTAGCTTCTTCCTGGAATaGGAGAGCCTCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: FPLAQLGEGACLPAPRILSFFLE*ESLCHR
Trigger: CCTGTGGCAGAGGCTCTCCCATTCCAGGAAGAAGCT...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGCTCCTCAATCACCGATaGGTCTTTAGCATCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSLLNHR*VFSICG
Trigger: GCCACAGATGCTAAAGACCCATCGGTGATTGAGGAG...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGTCATTGGCGCCCACCTaGTTGCCATCGTATGTGTCA +
Preference number: 4 (lower is better)
Translates to: HLFPASAAGGRCLLAGPTSLAPT*LPSYVS
Trigger: TGACACATACGATGGCAACCAGGTGGGCGCCAATGA...CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCCTGAGGGATGGTGAATaGCCTGCGGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACLRDGE*PAADEL
Trigger: GAGCTCATCAGCCGCAGGCCATTCACCATCCCTCAG...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCGCCGGTACCCTTTCTTaGCGAGAAAGGCCATGCGCC +
Preference number: 4 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSAGTLS*RERPCA
Trigger: GGCGCATGGCCTTTCTCGCCAAGAAAGGGTACCGGC...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCGAAGGCGCTCATGGCTaGCTGGTAGATGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSEGAHG*LVDERR
Trigger: CCGCCTCTCATCTACCAGCCAGCCATGAGCGCCTTC...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGCGGATTCTTCGGCTGTaGCATAAGGCACTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSRILRL*HKALCV
Trigger: AACACACAGTGCCTTATGCCACAGCCGAAGAATCCG...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCTTGTGGCCCGAGGTTTaGGGCGCTTGCCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: GKWCLVARGLGRLPWDSILWPEV*GACLGT
Trigger: AGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCGGAAGTGGTGTCTTGTaGCCCGAGGTTTGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: WCLVARGLGRLPWDSIPIGSGVL*PEVWGA
Trigger: AGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR CAA 72 bp GTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTaGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCA +
Preference number: 4 (lower is better)
Translates to: VVSCGPRFGALA*GLHPHLFPASA
Trigger: TGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCCTCGGGTCCTTGTGGGTaGTCTGGAGTTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LWPEVWGACLGTPSPSLSSGPCG*SGVGPG
Trigger: CCCTGGACCAACTCCAGATCACCCACAAGGACCCGA...GGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGACGCAGAAGGGGAAATaGAGTGATCTTTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWTQKGK*SDLWIP
Trigger: AGGAATCCAAAGATCACTTCATTTCCCCTTCTGCGT...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR TCA 90 bp CCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCATATTGCTGAAGACCTaGAGGATGGTAGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: PHLFPASAAGGRCLLAGPILLKT*RMVGRV
Trigger: AACCCTGCCTACCATCCTTCAGGTCTTCAGCAATAT...GGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGCCTGCTGCAGCAAGCTaGTGTCTTCGGCCACGGGGA +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQPAAAS*CLRPRG
Trigger: TCCCCGTGGCCGAAGACATCAGCTTGCTGCAGCAGG...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGGTGATGATGCTTGACTaGCTGCCTCTGCTGTCACCG +
Preference number: 4 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRVMMLD*LPLLSP
Trigger: CGGTGACAGCAGAGGCAGTCAGTCAAGCATCATCAC...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACCCTTCACTTGGGAGATaGGAGAGTCCAGTTCCACCC +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHPSLGR*ESPVPP
Trigger: GGGTGGAACTGGACTCTCTCATCTCCCAAGTGAAGG...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTTGGCTGGCTGGTAGATaGGAGGCGGCCTTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SCGPRFGALALGLHPHLFWLAGR*EAAFSG
Trigger: CCCTGAGAAGGCCGCCTCTCATCTACCAGCCAGCCA...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCTGGCATTGTGCTGCGTaGCCCTCCTGTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: GSGVLWPEVWGACLGTPSWHCAA*PSCSSS
Trigger: AGAGCTGGAACAGGAGGGTCACGCAGCACAATGCCA...GGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397771.6
ENST00000458594.5
CDS-3UTR GCA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTGCAGAGCTGGCATTGTaGTGCGTGACCCTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: SCGPRFGALALGLHPHLFAELAL*CVTLLG
Trigger: GCCGAGGAGGGTCACGCAGCACAATGCCAGCTCTGC...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307790.8
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACCACAAAATACCGGTCTaGCTTCTGCTCGGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHHKIPV*LLLGVQ
Trigger: CTGCACCCCGAGCAGAAGGCAGACCGGTATTTTGTG...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307790.8
ENST00000397771.6
CDS-3UTR GCA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCGATGGAGGCGCTTCTaGATGTCAACAACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRRWRRF*MSTTSG
Trigger: CCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCG...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCGGCCACGGGGAAGAGTaGATCATAGTCCCGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GKWCLVARGLGRLPWDSIGHGEE*IIVPEE
Trigger: TTCCTCCGGGACTATGATGCACTCTTCCCCGTGGCC...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCCTTCCTGGTGCTCTTaGCCTTGTGCACCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVPSWCS*PCAPGS
Trigger: TGAGCCGGGTGCACAAGGGCAAGAGCACCAGGAAGG...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGCCGCTGTGCCGCCACTaGACGCTTGTCGTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWPLCRH*TLVVQQ
Trigger: TTGCTGAACGACAAGCGTGCAGTGGCGGCACAGCGG...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCCTCGTCATCAGAGTCTaGATCATTGGCGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACLVIRV*IIGAHL
Trigger: CAGGTGGGCGCCAATGATGCAGACTCTGATGACGAG...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCTGCCTTTGCTCCTCTTaGGGTCGGCCATGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: GKWCLVARGLGRLPWDSICLCSS*GRPWFS
Trigger: GGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCA...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACATGGGATCATGCCTTTaGTCCTCTTGCGGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHMGSCL*SSCGRP
Trigger: TGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCAT...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGATGGGATCATGCCTTTaGTCCTCTTGCGGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRMGSCL*SSCGRP
Trigger: TGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCAT...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGAGGCACTGTGTGTTCTaGAGGAAGGCGCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRRHCVF*RKALMA
Trigger: AGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCT...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TCCGTCTGTCCACCCCTTCCCATGCACTCTCGACTGCCTGGAGGATGTAGGCAGTACCGGTCTGCCTTCTaGTCGGGGTGGCGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: SVCPPLPMHSRLPGGCRQYRSAF*SGWRVS
Trigger: GGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTA...CTGCCTACATCCTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGACAGACGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCCACAAAATACCGGTCTaGCTTCTGCTCGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: WCLVARGLGRLPWDSIPIHKIPV*LLLGVA
Trigger: CGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTG...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTTGGGTGATCTGGAGTTaGTCCAGGGGCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALWVIWS*SRGRAG
Trigger: GCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCA...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACGTCTTCGGGTCCTTGTaGGTGATCTGGAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHVFGSL*VIWSWS
Trigger: GGACCAACTCCAGATCACCCACAAGGACCCGAAGAC...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCAGTCTTCGGGTCCTTGTaGGTGATCTGGAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GEGACLPAPRILRLWHKAVFGSL*VIWSWS
Trigger: GGACCAACTCCAGATCACCCACAAGGACCCGAAGAC...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTCTCCTCAAGCTTCTaGGGTGTGGTATTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSLSSSF*GVVLAP
Trigger: CGGGGCCAATACCACACCCCAGAAGCTTGAGGAGAG...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCGAAAGGCCCAAAGTGTaGTGCAGGTATCACAAAGGT +
Preference number: 4 (lower is better)
Translates to: PHLFPASAAGGRCLLAGPERPKV*CRYHKG
Trigger: ACCTTTGTGATACCTGCACCACACTTTGGGCCTTTC...GGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCCAAAAGTCGTGCTTCTaGAAGGTCTGGCAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: PHLFPASAAGGRCLLAGPQKSCF*KVWQAK
Trigger: TTTGGCTTGCCAGACCTTCCAGAAGCACGACTTTTG...GGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCAAGCAGGTCCTTCACTTaGGAGATGAGAGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: PISFPLAQLGEGACLPAPSRSFT*EMRESS
Trigger: ACTGGACTCTCTCATCTCCCAAGTGAAGGACCTGCT...TGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGAGCAGGTCCTTCACTTaGGAGATGAGAGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: HLFPASAAGGRCLLAGPTSRSFT*EMRESS
Trigger: ACTGGACTCTCTCATCTCCCAAGTGAAGGACCTGCT...CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCGCCCTCACCAAGGTCTaGCAGCAGGTCCTTCACTTG +
Preference number: 4 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSALTKV*QQVLHL
Trigger: CAAGTGAAGGACCTGCTGCCAGACCTTGGTGAGGGC...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCTCAAACTCGTCATTCTaGAAGACGTTGTGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: PHLFPASAAGGRCLLAGPSNSSF*KTLWRD
Trigger: GTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGA...GGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTATGGTTCTCCGGTTGTaGTTGGCTCTTGTCGCCTTG +
Preference number: 4 (lower is better)
Translates to: FPLAQLGEGACLPAPRILMVLRL*LALVAL
Trigger: CAAGGCGACAAGAGCCAACCACAACCGGAGAACCAT...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTGCGGTCGGCCATaGTTCTCCGGTTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: WCLVARGLGRLPWDSIPISCGRP*FSGCGW
Trigger: CCAACCACAACCGGAGAACCATGGCCGACCGCAAGA...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCTCTTGCGGTCGGCCATaGTTCTCCGGTTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSSCGRP*FSGCGW
Trigger: CCAACCACAACCGGAGAACCATGGCCGACCGCAAGA...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGGAAGGCGCTCATGGCTaGCTGGTAGATGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCREGAHG*LVDERR
Trigger: CCGCCTCTCATCTACCAGCCAGCCATGAGCGCCTTC...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCTTGGGGCGCTTGCCTTaGGACTCCATCCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSLGRLP*DSIPIS
Trigger: AGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAA...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATTGGGGCGCTTGCCTTaGGACTCCATCCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPLGRLP*DSIPIS
Trigger: AGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAA...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTTGTGGCCCGAGGTTTaGGGCGCTTGCCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDLWPEV*GACLGT
Trigger: AGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCCGGAAGTGGTGTCTTGTaGCCCGAGGTTTGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: LWPEVWGACLGTPSPSLSGSGVL*PEVWGA
Trigger: AGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC...GGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACAGGGTAAAGGGGAAGTaGTGTCTTGTGGCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHRVKGK*CLVARG
Trigger: ACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR CAA 72 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTaGCCTTGGGACTCCATCCCCATCTCTTTCCCGCTA +
Preference number: 4 (lower is better)
Translates to: GKWCLVARGLGR*PWDSIPISFPL
Trigger: TAGCGGGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
3UTR CAA 72 bp TGGCCCTGCACCAGGTCTCAGGATGGGATCATGCCTTaGCTCCTCTTGCGGTCGGCCATGGTTCTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: WPCTRSQDGIMP*LLLRSAMVLRL
Trigger: CAACCGGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAGACCTGGTGCAGGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGTCGGGTCCTTGTGGGTaGTCTGGAGTTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWSGPCG*SGVGPG
Trigger: CCCTGGACCAACTCCAGATCACCCACAAGGACCCGA...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp CATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGACATGCGGAGGAAGGTaGGAAAAACACTTCGATGGA +
Preference number: 4 (lower is better)
Translates to: HLFPASAAGGRCLLAGPTTCGGR*EKHFDG
Trigger: TCCATCGAAGTGTTTTTCTCACCTTCCTCCGCATGT...CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGACATGCGGAGGAAGGTaGGAAAAACACTTCGATGGA +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLTCGGR*EKHFDG
Trigger: TCCATCGAAGTGTTTTTCTCACCTTCCTCCGCATGT...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCCTTCACTTGGGAGATaGGAGAGTCCAGTTCCACCC +
Preference number: 4 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSPSLGR*ESPVPP
Trigger: GGGTGGAACTGGACTCTCTCATCTCCCAAGTGAAGG...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGCTACTGAGTCCCTGCTaGACACATCAAACTCGTCAT +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLLLSPC*THQTRH
Trigger: ATGACGAGTTTGATGTGTTCAGCAGGGACTCAGTAG...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp CCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACTACTGAGTCCCTGCTaGACACATCAAACTCGTCAT +
Preference number: 4 (lower is better)
Translates to: PISFPLAQLGEGACLPAPLLSPC*THQTRH
Trigger: ATGACGAGTTTGATGTGTTCAGCAGGGACTCAGTAG...TGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCAGCACTGCAGGGTCCTaGACAAAATGGTCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GSGVLWPEVWGACLGTPSSTAGS*TKWSGL
Trigger: CAAGCCCGACCATTTTGTTCAGGACCCTGCAGTGCT...GGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACGGAGCAGTGGTGAGTTaGCTTTTCCAAAGAGCACGC +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHGAVVS*LFQRAR
Trigger: GCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCC...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGCCTTGCAAACCACAGTaGTGGAGGATATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLPCKPQ*WRILLK
Trigger: CTTCAGCAATATCCTCCAGCACTGTGGTTTGCAAGG...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGAGGCCCAAAGTGTGGTaGAGGTATCACAAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: HLFPASAAGGRCLLAGPTRPKVW*RYHKGR
Trigger: TCTACCTTTGTGATACCTGCACCACACTTTGGGCCT...CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTTTGACTGACTGCCTCTaGTGTCACCGTGACCCCGTT +
Preference number: 4 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSLTDCL*CHRDPV
Trigger: AACGGGGTCACGGTGACAGCAGAGGCAGTCAGTCAA...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTTGACTGACTGCCTCTaGTGTCACCGTGACCCCGTT +
Preference number: 4 (lower is better)
Translates to: WCLVARGLGRLPWDSIPILTDCL*CHRDPV
Trigger: AACGGGGTCACGGTGACAGCAGAGGCAGTCAGTCAA...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCCCACAGCCGCGGCTaGTCCCATGCACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMAHSRG*SHALLF
Trigger: GAAGAGGAGTGCATGGGAGCAGCCGCGGCTGTGGGC...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGAGGCTCTCGCCTGGCTaGAGTGGCACCTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMRLSPG*SGTSST
Trigger: GGTGGAGGAGGTGCCACTGCAGCCAGGCGAGAGCCT...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTCGTCATCAGAGTCTaGATCATTGGCGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSLVIRV*IIGAHL
Trigger: CAGGTGGGCGCCAATGATGCAGACTCTGATGACGAG...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGCTTCTCTCTCAGCACTaGAGGGTCCTGAACAAAATG +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLLLSQH*RVLNKM
Trigger: CATTTTGTTCAGGACCCTGCAGTGCTGAGAGAGAAG...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTGGCGAGAAAGGCCATaGGCCTGGCTTCTGCCTTCT +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDWRERP*AWLLPS
Trigger: AGAAGGCAGAAGCCAGGCGCATGGCCTTTCTCGCCA...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCGCTGTTGAGCTGTCATaGCGGTACCCTTTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: GKWCLVARGLGRLPWDSIAVELS*RYPFLA
Trigger: CGCCAAGAAAGGGTACCGGCATGACAGCTCAACAGC...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGATTCTTCACATGGCCTCGGGGGCTaGCGGCCACTGCTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: RGGEFPNCRACGYHKDSSHGLGG*RPLLLS
Trigger: GCTCAACAGCAGTGGCCGGCAGCCCCCGAGGCCATG...TGAAGAATCCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTTGGCTTCCTTCTTCCTaGGTTCCTGGGTTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSWLPSS*VPGLSR
Trigger: GCGAGACAACCCAGGAACGCAGGAAGAAGGAAGCCA...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TCTGTCCACCCCTTCCCATGCACTCTCGACTGCCTGGAGGATGTAGGCAGTCCGTGCCTTTGCTCCTCTTaGGGTCGGCCATGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SVHPFPCTLDCLEDVGSPCLCSS*GRPWFS
Trigger: GGAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCA...CGGACTGCCTACATCCTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATGGGATCATGCCTTTaGTCCTCTTGCGGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSMGSCL*SSCGRP
Trigger: TGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCAT...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCCTCAGGATGGGATCATaGCTTTGCTCCTCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACLRMGS*LCSSCG
Trigger: ACCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAG...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGGAGGTTTGGGGCGCTTaGCTTGGGACTCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWEVWGA*LGTPSP
Trigger: TGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTC...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGAGCCAGTCGAGGTCATTGGCTACGAAGGTGGCGCGTTCCAGGTACTCCTCCATACCGGTCTGCCTTCTaGTCGGGGTGCTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: GASRGHWLRRWRVPGTPPYRSAF*SGCSQS
Trigger: TGACTGTGAGCACCCCGAGCAGAAGGCAGACCGGTA...TGGAGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453160.5
CDS-3UTR CCA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCGTCTTCGGGTCCTTGTaGGTGATCTGGAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: WCLVARGLGRLPWDSIPIVFGSL*VIWSWS
Trigger: GGACCAACTCCAGATCACCCACAAGGACCCGAAGAC...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCTTTCCTATCATCTTCTaGAGCAGTGGTGAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: PHLFPASAAGGRCLLAGPFPIIF*SSGELP
Trigger: AGGCAACTCACCACTGCTCCAGAAGATGATAGGAAA...GGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGCAAACCACAGTGCTaGAGGATATTGCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLCKPQC*RILLKT
Trigger: GGTCTTCAGCAATATCCTCCAGCACTGTGGTTTGCA...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCAGCTTCTTCCTGGAATaGGAGAGCCTCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: WCLVARGLGRLPWDSIPISFFLE*ESLCHR
Trigger: CCTGTGGCAGAGGCTCTCCCATTCCAGGAAGAAGCT...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACCATTAGCTTCTTCCTaGAATGGGAGAGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GEGACLPAPRILRLWHKAPLASS*NGRASA
Trigger: GGCAGAGGCTCTCCCATTCCAGGAAGAAGCTAATGG...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTGCCCTCACCAAGGTCTaGCAGCAGGTCCTTCACTTG +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVALTKV*QQVLHL
Trigger: CAAGTGAAGGACCTGCTGCCAGACCTTGGTGAGGGC...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR CCA 90 bp CCACCCCCTCGTCGAATTTGCGGGGGACATAGCGCAGGTAGGAGTCCAGGCACTTTCTGGAAGACGTTGTaGCGAGACGTCAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: PPPRRICGGHSAGRSPGTFWKTL*RDVSRG
Trigger: ACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAA...AGTGCCTGGACTCCTACCTGCGCTATGTCCCCCGCAAATTCGACGAGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTCTCGCCTGGCTGCAGTaGCACCTCCTCCACCACCAC +
Preference number: 4 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFLAWLQ*HLLHHH
Trigger: GTGGTGGTGGAGGAGGTGCCACTGCAGCCAGGCGAG...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGAGGGATGGTGAATaGCCTGCGGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVLRDGE*PAADEL
Trigger: GAGCTCATCAGCCGCAGGCCATTCACCATCCCTCAG...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACGCCGGTACCCTTTCTTaGCGAGAAAGGCCATGCGCC +
Preference number: 4 (lower is better)
Translates to: GLPSARGGEFPNCRACGYAGTLS*RERPCA
Trigger: GGCGCATGGCCTTTCTCGCCAAGAAAGGGTACCGGC...GTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAGGCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp TTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCCTTCTTCCTGCGTTCCTaGGTTGTCTCGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LWPEVWGACLGTPSPSLSFFLRS*VVSRLC
Trigger: GCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAA...GGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCATTCTCCGGTTGTGGTTaGCTCTTGTCGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GEGACLPAPRILRLWHKAFSGCG*LLSPCW
Trigger: CCAACAAGGCGACAAGAGCCAACCACAACCGGAGAA...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTTCTTGCGGTCGGCCATaGTTCTCCGGTTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALSCGRP*FSGCGW
Trigger: CCAACCACAACCGGAGAACCATGGCCGACCGCAAGA...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCTTGCGGTCGGCCATaGTTCTCCGGTTGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDSCGRP*FSGCGW
Trigger: CCAACCACAACCGGAGAACCATGGCCGACCGCAAGA...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTGGAAGTGGTGTCTTGTaGCCCGAGGTTTGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: SCGPRFGALALGLHPHLFGSGVL*PEVWGA
Trigger: AGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCACGGGGAAGAGTGCATCATAGTCCCGGAGGAACCTCTTCTCCTGCAGCAAGGGGAAGTGGTGTCTTGTaGCCCGAGGTTTGGGGCGCT +
Preference number: 4 (lower is better)
Translates to: PRGRVHHSPGGTSSPAARGSGVL*PEVWGA
Trigger: AGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC...CCTTGCTGCAGGAGAAGAGGTTCCTCCGGGACTATGATGCACTCTTCCCCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp GTCCAGTTCCACCCCACACATGGCAGGGCCCACAGCCGCGGCTGCTCCCATGCACAGGGGTGTAGGGTCTaGTTTCATTTCTCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: VQFHPTHGRAHSRGCSHAQGCRV*FHFSRS
Trigger: AGACCTTGAGAAATGAAACCAGACCCTACACCCCTG...TGCATGGGAGCAGCCGCGGCTGTGGGCCCTGCCATGTGTGGGGTGGAACTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp GGAGCCAGTCGAGGTCATTGGCTACGAAGGTGGCGCGTTCCAGGTACTCCTCCACACCAGAATTTATCGTaGGGCAAGGCCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GASRGHWLRRWRVPGTPPHQNLS*GKARSQ
Trigger: CTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTG...TGGAGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR TCA 90 bp AAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGGGCTGAGGCCAACAACCTCAGGGGCTaGGGCCACCCCCTCGTCGAA +
Preference number: 4 (lower is better)
Translates to: KTLRWRRFCMSTTSGAEANNLRG*GHPLVE
Trigger: TTCGACGAGGGGGTGGCCTCAGCCCCTGAGGTTGTT...GGCCTCAGCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR TCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTGTGATGATGCTTGACTaGCTGCCTCTGCTGTCACCG +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVVMMLD*LPLLSP
Trigger: CGGTGACAGCAGAGGCAGTCAGTCAAGCATCATCAC...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCACCTCCAGGATATTGTTaGTCACCTGCTCTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPPPGYC*SPALGR
Trigger: ACGACCCAGAGCAGGTGATCAACAATATCCTGGAGG...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR TCA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCTCCAGGATATTGTTaGTCACCTGCTCTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: GKWCLVARGLGRLPWDSIPPGYC*SPALGR
Trigger: ACGACCCAGAGCAGGTGATCAACAATATCCTGGAGG...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR TCA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCCGGCTCAGGTCTACTaGGTCCCTGCTGAACACATC +
Preference number: 4 (lower is better)
Translates to: SCGPRFGALALGLHPHLFPAQVY*VPAEHI
Trigger: GATGTGTTCAGCAGGGACTCAGTAGACCTGAGCCGG...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTAGCACTGCAGGGTCCTaGACAAAATGGTCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVSTAGS*TKWSGL
Trigger: CAAGCCCGACCATTTTGTTCAGGACCCTGCAGTGCT...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCCAGCACTGCAGGGTCCTaGACAAAATGGTCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LWPEVWGACLGTPSPSLSSTAGS*TKWSGL
Trigger: CAAGCCCGACCATTTTGTTCAGGACCCTGCAGTGCT...GGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGTGGCATTGTGCTGCGTaGCCCTCCTGTTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWWHCAA*PSCSSS
Trigger: AGAGCTGGAACAGGAGGGTCACGCAGCACAATGCCA...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397771.6
ENST00000458594.5
CDS-3UTR GCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCGATGGAGGCGCTTCTaGATGTCAACAACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVRWRRF*MSTTSG
Trigger: CCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCG...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCTCCATTTCGGGAATTaGTGCTTCGTAGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: FPLAQLGEGACLPAPRILLHFGN*CFVEGS
Trigger: GCTTCCTTCTACGAAGCAGCAATTCCCGAAATGGAG...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGCCTCCTCTTCTTAATTaGAGACTCCATTTCGGGAAT +
Preference number: 4 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSPPLLN*RLHFGN
Trigger: ATTCCCGAAATGGAGTCTGCAATTAAGAAGAGGAGG...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGAATGGGAGAGCCTCTaGCACAGGTCACCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALEWESL*HRSPRS
Trigger: GCTTCTTGGTGACCTGTGGCAGAGGCTCTCCCATTC...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGGAATGGGAGAGCCTCTaGCACAGGTCACCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCREWESL*HRSPRS
Trigger: GCTTCTTGGTGACCTGTGGCAGAGGCTCTCCCATTC...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTACTGATGAGGCCTGCTaGAGCAAGCTGATGTCTTCG +
Preference number: 4 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSTDEAC*SKLMSS
Trigger: CGAAGACATCAGCTTGCTGCAGCAGGCCTCATCAGT...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCACTGATGAGGCCTGCTaGAGCAAGCTGATGTCTTCG +
Preference number: 4 (lower is better)
Translates to: WCLVARGLGRLPWDSIPITDEAC*SKLMSS
Trigger: CGAAGACATCAGCTTGCTGCAGCAGGCCTCATCAGT...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCACTGATGAGGCCTGCTaGAGCAAGCTGATGTCTTCG +
Preference number: 4 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSTDEAC*SKLMSS
Trigger: CGAAGACATCAGCTTGCTGCAGCAGGCCTCATCAGT...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCCATGCACTCTCGACTaGCTGGAGGATGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVPCTLD*LEDVGS
Trigger: ACTGCCTACATCCTCCAGGCAGTCGAGAGTGCATGG...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGCCATGCACTCTCGACTaGCTGGAGGATGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRPCTLD*LEDVGS
Trigger: ACTGCCTACATCCTCCAGGCAGTCGAGAGTGCATGG...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGCTCGTCATCAGAGTCTaGATCATTGGCGCCCACCTG +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRLVIRV*IIGAHL
Trigger: CAGGTGGGCGCCAATGATGCAGACTCTGATGACGAG...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCCGCTGTTGAGCTGTCATaGCGGTACCCTTTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LWPEVWGACLGTPSPSLSAVELS*RYPFLA
Trigger: CGCCAAGAAAGGGTACCGGCATGACAGCTCAACAGC...GGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGATGGGATCATGCCTTTaGTCCTCTTGCGGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWMGSCL*SSCGRP
Trigger: TGGCCGACCGCAAGAGGAGCAAAGGCATGATCCCAT...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCCAGGCACTGTGTGTTCTaGAGGAAGGCGCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: LWPEVWGACLGTPSPSLSRHCVF*RKALMA
Trigger: AGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCT...GGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTGACACACATGGTCTCTaGATACACGAGGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVDTHGL*IHEVAS
Trigger: CGAGGCCACCTCGTGTATGCAGAGACCATGTGTGTC...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397771.6
CDS-3UTR GCA 90 bp AGCCAGTCGAGGTCATTGGCTACGAAGGTGGCGCGTTCCAGGTACTCCTCCACTGAGCTGGCATTGTGCTaGGTGACCCTCCTGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SQSRSLATKVARSRYSSTELALC*VTLLFQ
Trigger: CTGGAACAGGAGGGTCACGCAGCACAATGCCAGCTC...AGTGGAGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGCAGAGCTGGCATTGTaGTGCGTGACCCTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQAELAL*CVTLLF
Trigger: GAACAGGAGGGTCACGCAGCACAATGCCAGCTCTGC...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397771.6
ENST00000458594.5
CDS-3UTR GCA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGCCTCTCATGTGGGTCTaGAGGACCCCCTCCCATTTA +
Preference number: 4 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWPLMWV*RTPSHL
Trigger: TAAATGGGAGGGGGTCCTGCAGACCCACATGAGAGG...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp CCTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGTACCGGTCTGCCTTCTaGTCGGGGTGGCGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: PSARGGEFPNCRACGYHKYRSAF*SGWRVS
Trigger: GGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTA...CTTGTGGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS-3UTR CCA 90 bp CTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGTGGGTGATCTGGAGTTaGTCCAGGGGCAGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLLGVASFQTVEPVGTTRWVIWS*SRGRAG
Trigger: GCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCA...CCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS-3UTR CCA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGTCCTTGTGGGTGATCTaGAGTTGGTCCAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWSLWVI*SWSRGR
Trigger: TCTGCCCCTGGACCAACTCCAGATCACCCACAAGGA...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTGTCTTCGGGTCCTTGTaGGTGATCTGGAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVVFGSL*VIWSWS
Trigger: GGACCAACTCCAGATCACCCACAAGGACCCGAAGAC...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGCATTGGCTACGAAGGTaGCGCGTTCCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRHWLRR*RVPGTP
Trigger: AGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATG...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CCA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGGCCAGTCGAGGTCATTaGCTACGAAGGTGGCGCGTT +
Preference number: 4 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWASRGH*LRRWRV
Trigger: AACGCGCCACCTTCGTAGCCAATGACCTCGACTGGC...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CCA 90 bp GTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCGCCAGTCGAGGTCATTaGCTACGAAGGTGGCGCGTT +
Preference number: 4 (lower is better)
Translates to: VCLLLGVASFQTVEPVGTASRGH*LRRWRV
Trigger: AACGCGCCACCTTCGTAGCCAATGACCTCGACTGGC...GGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAGGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGAGAAAAACACTTCGATaGAGGCGCTTCTGCATGTCA +
Preference number: 4 (lower is better)
Translates to: LAQLGEGACLPAPRILRLRKTLR*RRFCMS
Trigger: TGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCT...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGCTCTCCTCAAGCTTCTaGGGTGTGGTATTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWLSSSF*GVVLAP
Trigger: CGGGGCCAATACCACACCCCAGAAGCTTGAGGAGAG...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTGAAAGGCCCAAAGTGTaGTGCAGGTATCACAAAGGT +
Preference number: 4 (lower is better)
Translates to: FPLAQLGEGACLPAPRILERPKV*CRYHKG
Trigger: ACCTTTGTGATACCTGCACCACACTTTGGGCCTTTC...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCACCATTAGCTTCTTCCTaGAATGGGAGAGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPPLASS*NGRASA
Trigger: GGCAGAGGCTCTCCCATTCCAGGAAGAAGCTAATGG...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AACACATCAAACTCGTCATTCTGGAAGACGTTGTGGCGAGACGTCAGCAGGGGTGTTCCACCCCACACATaGCAGGGCCCACAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: NTSNSSFWKTLWRDVSRGVPPHT*QGPQPR
Trigger: CCGCGGCTGTGGGCCCTGCCATGTGTGGGGTGGAAC...ACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGGCCCTCACCAAGGTCTaGCAGCAGGTCCTTCACTTG +
Preference number: 4 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWALTKV*QQVLHL
Trigger: CAAGTGAAGGACCTGCTGCCAGACCTTGGTGAGGGC...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR CCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACGTTGATCACCTGCTCTaGGTCGTAGTGGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHVDHLL*VVVVVL
Trigger: GAGTACTACCACTACGACCCAGAGCAGGTGATCAAC...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR CCA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCAGTTGATCACCTGCTCTaGGTCGTAGTGGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: GEGACLPAPRILRLWHKAVDHLL*VVVVVL
Trigger: GAGTACTACCACTACGACCCAGAGCAGGTGATCAAC...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR CCA 90 bp TTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCCTTCTGGAAGACGTTGTaGCGAGACGTCAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: LWPEVWGACLGTPSPSLSFWKTL*RDVSRG
Trigger: ACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAA...GGAAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTTCTGGAAGACGTTGTaGCGAGACGTCAGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDFWKTL*RDVSRG
Trigger: ACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAA...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACCAGAGTCTGCATCATTaGCGCCCACCTGGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDQSLHH*RPPGCH
Trigger: ATGGCAACCAGGTGGGCGCCAATGATGCAGACTCTG...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGGAAAGGCCATGCGCCTaGCTTCTGCCTTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRERPCA*LLPSLS
Trigger: TGAGAGAGAAGGCAGAAGCCAGGCGCATGGCCTTTC...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTTTCTTCCTGCGTTCCTaGGTTGTCTCGCGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SCGPRFGALALGLHPHLFFFLRS*VVSRLC
Trigger: GCAGAGCCGCGAGACAACCCAGGAACGCAGGAAGAA...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCCTCTTGTCGCCTTGTTaGCTTCCTTCTTCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACLLSPC*LPSSCV
Trigger: AACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAG...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATGGTTCTCCGGTTGTaGTTGGCTCTTGTCGCCTTG +
Preference number: 4 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSMVLRL*LALVAL
Trigger: CAAGGCGACAAGAGCCAACCACAACCGGAGAACCAT...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCACACCAGGTCTCAGGATaGGATCATGCCTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPHQVSG*DHAFAP
Trigger: AGGAGCAAAGGCATGATCCCATCCTGAGACCTGGTG...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCCACCAGGTCTCAGGATaGGATCATGCCTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSHQVSG*DHAFAP
Trigger: AGGAGCAAAGGCATGATCCCATCCTGAGACCTGGTG...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCTTGGGGCGCTTGCCTTaGGACTCCATCCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: VCLLLGVASFQTVEPVGTLGRLP*DSIPIS
Trigger: AGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAA...GGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAGGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCTCTTTGGATTCCTTGTaGGTGGACATGCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSSLDSL*VDMRRK
Trigger: CTTCCTCCGCATGTCCACTCACAAGGAATCCAAAGA...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR TCA 90 bp GGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCTTCTGGAGCAGTGGTaGGTTGCCTTTTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GSGVLWPEVWGACLGTPSLLEQW*VAFSKE
Trigger: CTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAG...GGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACATATTGCTGAAGACCTaGAGGATGGTAGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHILLKT*RMVGRV
Trigger: AACCCTGCCTACCATCCTTCAGGTCTTCAGCAATAT...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGGATGTGATGATGCTTaGCTGACTGCCTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWGCDDA*LTASAV
Trigger: GACAGCAGAGGCAGTCAGTCAAGCATCATCACATCC...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGGGATGTGATGATGCTTaGCTGACTGCCTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRGCDDA*LTASAV
Trigger: GACAGCAGAGGCAGTCAGTCAAGCATCATCACATCC...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGCCTTCACTTGGGAGATaGGAGAGTCCAGTTCCACCC +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQPSLGR*ESPVPP
Trigger: GGGTGGAACTGGACTCTCTCATCTCCCAAGTGAAGG...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGCCTCCAGGATATTGTTaGTCACCTGCTCTGGGTCGT +
Preference number: 4 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWPPGYC*SPALGR
Trigger: ACGACCCAGAGCAGGTGATCAACAATATCCTGGAGG...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR GCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACGGAGCAGTGGTGAGTTaGCTTTTCCAAAGAGCACGC +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDGAVVS*LFQRAR
Trigger: GCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCC...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TCCGTCTGTCCACCCCTTCCCATGCACTCTCGACTGCCTGGAGGATGTAGGCAGGGAGCAGTGGTGAGTTaGCTTTTCCAAAGAGCACGC +
Preference number: 4 (lower is better)
Translates to: SVCPPLPMHSRLPGGCRQGAVVS*LFQRAR
Trigger: GCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCC...CTGCCTACATCCTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGACAGACGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACCTTGCAAACCACAGTaGTGGAGGATATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GEGACLPAPRILRLWHKAPCKPQ*WRILLK
Trigger: CTTCAGCAATATCCTCCAGCACTGTGGTTTGCAAGG...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGTTGGCCCCGTCCCCTTaGAAACCACAGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMLAPSP*KPQCWR
Trigger: CCTCCAGCACTGTGGTTTGCAAGGGGACGGGGCCAA...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACAGGCCCAAAGTGTGGTaGAGGTATCACAAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHRPKVW*RYHKGR
Trigger: TCTACCTTTGTGATACCTGCACCACACTTTGGGCCT...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp CCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACCTCCTCTTCTTAATTaGAGACTCCATTTCGGGAAT +
Preference number: 4 (lower is better)
Translates to: PISFPLAQLGEGACLPAPPPLLN*RLHFGN
Trigger: ATTCCCGAAATGGAGTCTGCAATTAAGAAGAGGAGG...TGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTGAATGTTGTCACAGCTaGTTTCTAGGATGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: FPLAQLGEGACLPAPRILECCHS*FLGWEG
Trigger: TCCTTCCCATCCTAGAAAGCAGCTGTGACAACATTC...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCAGGAACCTCTTCTCCTaGAGCAAGGAGCTGAAGATC +
Preference number: 4 (lower is better)
Translates to: GSGVLWPEVWGACLGTPSRNLFS*SKELKI
Trigger: GATCTTCAGCTCCTTGCTGCAGGAGAAGAGGTTCCT...GGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGTTCTCCGGTTGTGGTTGGCTCTTGTCGCCTTGTTGGCTTCCTTCTTCCTGCGTCCACCCCTTCCCATaGACTCTCGACTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: WFSGCGWLLSPCWLPSSCVHPFP*TLDCLE
Trigger: CTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGAC...GCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGAGAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GCGGAGGAAGGTGAGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACGTAGCGCTGCCGCTGTaGCGCCACTGCACGCTTGTC +
Preference number: 4 (lower is better)
Translates to: AEEGEKNTSMEALLHVNNVALPL*RHCTLV
Trigger: GACAAGCGTGCAGTGGCGGCACAGCGGCAGCGCTAC...GTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTCCTCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGCTGTTGAGCTGTCATaGCGGTACCCTTTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQAVELS*RYPFLA
Trigger: CGCCAAGAAAGGGTACCGGCATGACAGCTCAACAGC...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GAGCTGTCATGCCGGTACCCTTTCTTGGCGAGAAAGGCCATGCGCCTGGCTTCTGCTGTTGAGCTGTCATaGCGGTACCCTTTCTTGGCG +
Preference number: 4 (lower is better)
Translates to: ELSCRYPFLARKAMRLASAVELS*RYPFLA
Trigger: CGCCAAGAAAGGGTACCGGCATGACAGCTCAACAGC...AGAAGCCAGGCGCATGGCCTTTCTCGCCAAGAAAGGGTACCGGCATGACAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTCTCAGGATGGGATCATaGCTTTGCTCCTCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALLRMGS*LCSSCG
Trigger: ACCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAG...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGCTCAGGATGGGATCATaGCTTTGCTCCTCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWLRMGS*LCSSCG
Trigger: ACCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAG...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGAGGTTTGGGGCGCTTaGCTTGGGACTCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFEVWGA*LGTPSP
Trigger: TGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTC...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GCCAGTCGAGGTCATTGGCTACGAAGGTGGCGCGTTCCAGGTACTCCTCCACTACACAAAATACCGGTCTaGCTTCTGCTCGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: ASRGHWLRRWRVPGTPPLHKIPV*LLLGVL
Trigger: GAGCACCCCGAGCAGAAGGCAGACCGGTATTTTGTG...TAGTGGAGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGACCTCGACTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453160.5
CDS-3UTR CCA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTTCCTTGTGGGTGATCTaGAGTTGGTCCAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SCGPRFGALALGLHPHLFSLWVI*SWSRGR
Trigger: TCTGCCCCTGGACCAACTCCAGATCACCCACAAGGA...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTAGAAAAACACTTCGATaGAGGCGCTTCTGCATGTCA +
Preference number: 4 (lower is better)
Translates to: FPLAQLGEGACLPAPRILRKTLR*RRFCMS
Trigger: TGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCT...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTGCTTCTGGAAGGTCTaGCAAGCCAAAGGGAAGATA +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACCFWKV*QAKGKI
Trigger: TATCTTCCCTTTGGCTTGCCAGACCTTCCAGAAGCA...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCATCAAACTCGTCATTCTaGAAGACGTTGTGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: GEGACLPAPRILRLWHKASNSSF*KTLWRD
Trigger: GTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGA...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTCAAACTCGTCATTCTaGAAGACGTTGTGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: WDSIPISFPLAQLGEGACSNSSF*KTLWRD
Trigger: GTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGA...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTTCATTGGCGCCCACCTaGTTGCCATCGTATGTGTCA +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVSLAPT*LPSYVS
Trigger: TGACACATACGATGGCAACCAGGTGGGCGCCAATGA...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTCAGAGTCTGCATCATTaGCGCCCACCTGGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SCGPRFGALALGLHPHLFQSLHH*RPPGCH
Trigger: ATGGCAACCAGGTGGGCGCCAATGATGCAGACTCTG...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCCTCTTGTCGCCTTGTTaGCTTCCTTCTTCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: WCLVARGLGRLPWDSIPILLSPC*LPSSCV
Trigger: AACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAG...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACATGGTTCTCCGGTTGTaGTTGGCTCTTGTCGCCTTG +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDMVLRL*LALVAL
Trigger: CAAGGCGACAAGAGCCAACCACAACCGGAGAACCAT...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTCACCAGGTCTCAGGATaGGATCATGCCTTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALHQVSG*DHAFAP
Trigger: AGGAGCAAAGGCATGATCCCATCCTGAGACCTGGTG...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGAGGGTAAAGGGGAAGTaGTGTCTTGTGGCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQRVKGK*CLVARG
Trigger: ACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCAGAATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCATTGGCTACGAAAGGCCACCTCTCATGTaGGTCTGCAGGACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PEFIVRQGQEPVEVIGYERPPLM*VCRTPS
Trigger: GGAGGGGGTCCTGCAGACCCACATGAGAGGTGGCCT...TTCGTAGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CAA 72 bp TGCGGTCGGCCATGGTTCTCCGGTTGTGGTTGGCTCTaGTCGCCTTGTTGGCTTCCTTCTTCCTGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: CGRPWFSGCGWL*SPCWLPSSCVP
Trigger: AGGAACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGAGAACCATGGCCGACCGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CAA 72 bp CCTTTGCTCCTCTTGCGGTCGGCCATGGTTCTCCGGTaGTGGTTGGCTCTTGTCGCCTTGTTGGCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PLLLLRSAMVLR*WLALVALLASF
Trigger: GAAGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGAGAACCATGGCCGACCGCAAGAGGAGCAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp TCCACTAGGGCGGGAATGTTGTCTTTAGGGGGCGGTTTGTATAACACAAAATACACGGTGACAGCTCCCTaGGCGCCCGCACTTCCGGGG +
Preference number: 4 (lower is better)
Translates to: STRAGMLSLGGGLYNTKYTVTAP*APALPG
Trigger: CCCCGGAAGTGCGGGCGCTCAGGGAGCTGTCACCGT...GTATTTTGTGTTATACAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454854.5
CDS-3UTR TCA 90 bp GCGGAGGAAGGTGAGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACAACAACCTCAGGGGCTaGGGCCACCCCCTCGTCGAA +
Preference number: 4 (lower is better)
Translates to: AEEGEKNTSMEALLHVNNNNLRG*GHPLVE
Trigger: TTCGACGAGGGGGTGGCCTCAGCCCCTGAGGTTGTT...GTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTCCTCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR TCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGTCTTTGGATTCCTTGTaGGTGGACATGCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRSLDSL*VDMRRK
Trigger: CTTCCTCCGCATGTCCACTCACAAGGAATCCAAAGA...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR TCA 90 bp GGAGCCAGTCGAGGTCATTGGCTACGAAGGTGGCGCGTTCCAGGTACTCCTCCATCTTTGGATTCCTTGTaGGTGGACATGCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GASRGHWLRRWRVPGTPPSLDSL*VDMRRK
Trigger: CTTCCTCCGCATGTCCACTCACAAGGAATCCAAAGA...TGGAGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACCTTCTGGAGCAGTGGTaGGTTGCCTTTTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDLLEQW*VAFSKE
Trigger: CTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAG...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGGGATGTGATGATGCTTaGCTGACTGCCTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWGCDDA*LTASAV
Trigger: GACAGCAGAGGCAGTCAGTCAAGCATCATCACATCC...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCCTACTGAGTCCCTGCTaGACACATCAAACTCGTCAT +
Preference number: 4 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSLLSPC*THQTRH
Trigger: ATGACGAGTTTGATGTGTTCAGCAGGGACTCAGTAG...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCTACTGAGTCCCTGCTaGACACATCAAACTCGTCAT +
Preference number: 4 (lower is better)
Translates to: GSGVLWPEVWGACLGTPSLLSPC*THQTRH
Trigger: ATGACGAGTTTGATGTGTTCAGCAGGGACTCAGTAG...GGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGCCGGCTCAGGTCTACTaGGTCCCTGCTGAACACATC +
Preference number: 4 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMPAQVY*VPAEHI
Trigger: GATGTGTTCAGCAGGGACTCAGTAGACCTGAGCCGG...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTATTTTGGATTCCTTGTaGGTGGACATGCGGAGGAAG +
Preference number: 4 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSILDSL*VDMRRK
Trigger: CTTCCTCCGCATGTCCACTCACAAGGAATCCAAAAT...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000542393.5
CDS-3UTR GCA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGGAATGTTGTCACAGCTaGTTTCTAGGATGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRECCHS*FLGWEG
Trigger: TCCTTCCCATCCTAGAAAGCAGCTGTGACAACATTC...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACGAATGTTGTCACAGCTaGTTTCTAGGATGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHECCHS*FLGWEG
Trigger: TCCTTCCCATCCTAGAAAGCAGCTGTGACAACATTC...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTAGGAACCTCTTCTCCTaGAGCAAGGAGCTGAAGATC +
Preference number: 4 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALRNLFS*SKELKI
Trigger: GATCTTCAGCTCCTTGCTGCAGGAGAAGAGGTTCCT...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGGCCACGGGGAAGAGTaGATCATAGTCCCGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMGHGEE*IIVPEE
Trigger: TTCCTCCGGGACTATGATGCACTCTTCCCCGTGGCC...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCCTTCTCTCTCAGCACTaGAGGGTCCTGAACAAAATG +
Preference number: 4 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSLLSQH*RVLNKM
Trigger: CATTTTGTTCAGGACCCTGCAGTGCTGAGAGAGAAG...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGACATAGCGCAGGTAGGAGTCCAGGCACTTCTGTAGAGTCTCGTCAAAGATCAGGGAAGGTGCCTGCTTaGCGGCCCCACGGATTCTTC +
Preference number: 4 (lower is better)
Translates to: GHSAGRSPGTSVESRQRSGKVPA*RPHGFF
Trigger: GAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC...TGATCTTTGACGAGACTCTACAGAAGTGCCTGGACTCCTACCTGCGCTATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GTTTGTATAACACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCACTGGGGGAAGGTGCCTaGTTGCCGGCCCCACGGATT +
Preference number: 4 (lower is better)
Translates to: VCITQNTGLPSARGGEFPLGEGA*LPAPRI
Trigger: AATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAG...TGGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGTTATACAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GGAATGTTGTCTTTAGGGGGCGGTTTGTATAACACAAAATACCGGTCTGCCTTCGCAGCTGGGGGAAGGTaGCTGCTTGCCGGCCCCACG +
Preference number: 4 (lower is better)
Translates to: GMLSLGGGLYNTKYRSAFAAGGR*LLAGPT
Trigger: CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGC...GAAGGCAGACCGGTATTTTGTGTTATACAAACCGCCCCCTAAAGACAACATTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp CACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGGAGGTTTGGGGCGCTTaGCTTGGGACTCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: HKIPVCLLLGVASFQTVEEVWGA*LGTPSP
Trigger: TGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTC...CTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTCTTCCGGGGTCAAACTaGGATTCCGCAGGAGCAGAC +
Preference number: 4 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFLPGSN*DSAGAD
Trigger: GTCTGCTCCTGCGGAATCGCAGTTTGACCCCGGAAG...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542393.5
CDS-3UTR CCA 90 bp GCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGATTCTCTCTCCTCAAGCTTCTaGGGTGTGGTATTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: ARGGEFPNCRACGYHKDSLSSSF*GVVLAP
Trigger: CGGGGCCAATACCACACCCCAGAAGCTTGAGGAGAG...AGAATCCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp GAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGGGCTGAGGGGAGAGGCATGTCACTaGGGGTCAATCGGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: EKHFDGGASACQQPQGLRGEACH*GSIGPS
Trigger: AGAGGGGCCGATTGACCCCCAGTGACATGCCTCTCC...CCTCAGCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATGCTTCTGGAAGGTCTaGCAAGCCAAAGGGAAGATA +
Preference number: 4 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPCFWKV*QAKGKI
Trigger: TATCTTCCCTTTGGCTTGCCAGACCTTCCAGAAGCA...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACCTCCTCAATCACCGATaGGTCTTTAGCATCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDLLNHR*VFSICG
Trigger: GCCACAGATGCTAAAGACCCATCGGTGATTGAGGAG...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTAGCAGGTCCTTCACTTaGGAGATGAGAGAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALSRSFT*EMRESS
Trigger: ACTGGACTCTCTCATCTCCCAAGTGAAGGACCTGCT...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGTCATTGGCGCCCACCTaGTTGCCATCGTATGTGTCA +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQSLAPT*LPSYVS
Trigger: TGACACATACGATGGCAACCAGGTGGGCGCCAATGA...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GAGCTGTCATGCCGGTACCCTTTCTTGGCGAGAAAGGCCATGCGCCTGGCTTCTTCATTGGCGCCCACCTaGTTGCCATCGTATGTGTCA +
Preference number: 4 (lower is better)
Translates to: ELSCRYPFLARKAMRLASSLAPT*LPSYVS
Trigger: TGACACATACGATGGCAACCAGGTGGGCGCCAATGA...AGAAGCCAGGCGCATGGCCTTTCTCGCCAAGAAAGGGTACCGGCATGACAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp CTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGGAAAGGCCATGCGCCTaGCTTCTGCCTTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: LLLGVASFQTVEPVGTTRERPCA*LLPSLS
Trigger: TGAGAGAGAAGGCAGAAGCCAGGCGCATGGCCTTTC...CCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTCTTGTCGCCTTGTTaGCTTCCTTCTTCCTGCGTT +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVLLSPC*LPSSCV
Trigger: AACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAG...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGATGGTTCTCCGGTTGTaGTTGGCTCTTGTCGCCTTG +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQMVLRL*LALVAL
Trigger: CAAGGCGACAAGAGCCAACCACAACCGGAGAACCAT...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGTTGGGGCGCTTGCCTTaGGACTCCATCCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMLGRLP*DSIPIS
Trigger: AGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAA...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AGGTACTCCTCCACTAGGGCGGGAATGTTGTCTTTAGGGGGCGGTTTGTATAACAGGCCACCTCTCATGTaGGTCTGCAGGACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RYSSTRAGMLSLGGGLYNRPPLM*VCRTPS
Trigger: GGAGGGGGTCCTGCAGACCCACATGAGAGGTGGCCT...GTTATACAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGTGGAGGAGTACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
3UTR CAA 72 bp CTGCGGCTGATGAGCTCGTCATCAGAGTCTGCATCATaGGCGCCCACCTGGTTGCCATCGTATGTGTCATCG +
Preference number: 4 (lower is better)
Translates to: LRLMSSSSESAS*APTWLPSYVSS
Trigger: CGATGACACATACGATGGCAACCAGGTGGGCGCCAATGATGCAGACTCTGATGACGAGCTCATCAGCCGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp ACACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGATCGGGTCCTTGTGGGTaGTCTGGAGTTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TQNTGLPSARGGEFPNCRSGPCG*SGVGPG
Trigger: CCCTGGACCAACTCCAGATCACCCACAAGGACCCGA...TCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS-3UTR TCA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGCACCAGAATTTATCGTaGGGCAAGGCCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMHQNLS*GKARSQ
Trigger: CTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTG...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR TCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTACATGCGGAGGAAGGTaGGAAAAACACTTCGATGGA +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVTCGGR*EKHFDG
Trigger: TCCATCGAAGTGTTTTTCTCACCTTCCTCCGCATGT...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGGAAGGAACTCTTCGATaGAGCCCTGAATGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCREGTLR*SPECCH
Trigger: GTGACAACATTCAGGGCTTCATCGAAGAGTTCCTTC...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTGAAGGAACTCTTCGATaGAGCCCTGAATGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVEGTLR*SPECCH
Trigger: GTGACAACATTCAGGGCTTCATCGAAGAGTTCCTTC...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGTGATGATGCTTGACTaGCTGCCTCTGCTGTCACCG +
Preference number: 4 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFVMMLD*LPLLSP
Trigger: CGGTGACAGCAGAGGCAGTCAGTCAAGCATCATCAC...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TGGTTCTCCGGTTGTGGTTGGCTCTTGTCGCCTTGTTGGCTTCCTTCTTCCTGCAGCACTGCAGGGTCCTaGACAAAATGGTCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: WFSGCGWLLSPCWLPSSCSTAGS*TKWSGL
Trigger: CAAGCCCGACCATTTTGTTCAGGACCCTGCAGTGCT...GCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGAGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp GAAGGTGAGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGTGGCTGGCTGGTAGATaGGAGGCGGCCTTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: EGEKNTSMEALLHVNNLRWLAGR*EAAFSG
Trigger: CCCTGAGAAGGCCGCCTCTCATCTACCAGCCAGCCA...CCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp AAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGGGCTGAGGCCGGTGCTCACAGTCAGTaGGTGGCAGATCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: KTLRWRRFCMSTTSGAEAGAHSQ*VADPRS
Trigger: AGACCTTGGATCTGCCACTCACTGACTGTGAGCACC...GGCCTCAGCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453160.5
CDS-3UTR GCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTAGGCCCAAAGTGTGGTaGAGGTATCACAAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVRPKVW*RYHKGR
Trigger: TCTACCTTTGTGATACCTGCACCACACTTTGGGCCT...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGGTCACCAAGAAGCTTaGTATCTTCAAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWGHQEA*YLQASS
Trigger: AGAGGAGGCTTGAAGATAGCAAGCTTCTTGGTGACC...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGGGTCACCAAGAAGCTTaGTATCTTCAAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRGHQEA*YLQASS
Trigger: AGAGGAGGCTTGAAGATAGCAAGCTTCTTGGTGACC...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp GGCACCAGAATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCATTGGCTATTGACTGACTGCCTCTaGTGTCACCGTGACCCCGTT +
Preference number: 4 (lower is better)
Translates to: GTRIYREARPGASRGHWLLTDCL*CHRDPV
Trigger: AACGGGGTCACGGTGACAGCAGAGGCAGTCAGTCAA...TAGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GTCAAAGATCACCTGGCACCAGAATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGTGCTCTTGCCCTTGTaGACCCGGCTCAGGTCTACT +
Preference number: 4 (lower is better)
Translates to: VKDHLAPEFIVRQGQEPVVLLPL*TRLRST
Trigger: AGTAGACCTGAGCCGGGTGCACAAGGGCAAGAGCAC...GACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTGCCAGGTGATCTTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp AGATCACCTGGCACCAGAATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTTGGCTTCCTTCTTCCTaGGTTCCTGGGTTGTCTCGC +
Preference number: 4 (lower is better)
Translates to: RSPGTRIYREARPGASRGWLPSS*VPGLSR
Trigger: GCGAGACAACCCAGGAACGCAGGAAGAAGGAAGCCA...ACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTGCCAGGTGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp CACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGGAGCTGGCATTGTGCTaGGTGACCCTCCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HKIPVCLLLGVASFQTVEELALC*VTLLKA
Trigger: TGCCTTCAGGAGGGTCACGCAGCACAATGCCAGCTC...CTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454854.5
CDS-3UTR CCA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGTCCTTGTGGGTGATCTaGAGTTGGTCCAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMSLWVI*SWSRGR
Trigger: TCTGCCCCTGGACCAACTCCAGATCACCCACAAGGA...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTCATTGGCTACGAAGGTaGCGCGTTCCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFHWLRR*RVPGTP
Trigger: AGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATG...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CCA 90 bp CCAGAATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCATTGGCTACGAAGCCAGTCGAGGTCATTaGCTACGAAGGTGGCGCGTT +
Preference number: 4 (lower is better)
Translates to: PEFIVRQGQEPVEVIGYEASRGH*LRRWRV
Trigger: AACGCGCCACCTTCGTAGCCAATGACCTCGACTGGC...TTCGTAGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR CCA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCTTTCCTATCATCTTCTaGAGCAGTGGTGAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: GKWCLVARGLGRLPWDSIFPIIF*SSGELP
Trigger: AGGCAACTCACCACTGCTCCAGAAGATGATAGGAAA...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTGAAAGGCCCAAAGTGTaGTGCAGGTATCACAAAGGT +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVERPKV*CRYHKG
Trigger: ACCTTTGTGATACCTGCACCACACTTTGGGCCTTTC...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGTGCTTCTGGAAGGTCTaGCAAGCCAAAGGGAAGATA +
Preference number: 4 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWCFWKV*QAKGKI
Trigger: TATCTTCCCTTTGGCTTGCCAGACCTTCCAGAAGCA...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGGTTGATCACCTGCTCTaGGTCGTAGTGGTAGTACTC +
Preference number: 4 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWVDHLL*VVVVVL
Trigger: GAGTACTACCACTACGACCCAGAGCAGGTGATCAAC...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR CCA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGAAAGGCCATGCGCCTaGCTTCTGCCTTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMERPCA*LLPSLS
Trigger: TGAGAGAGAAGGCAGAAGCCAGGCGCATGGCCTTTC...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGCGGATTCTTCGGCTGTaGCATAAGGCACTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQRILRL*HKALCV
Trigger: AACACACAGTGCCTTATGCCACAGCCGAAGAATCCG...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGCACCAGAATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCATTGGCTAAGGGTAAAGGGGAAGTaGTGTCTTGTGGCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: GTRIYREARPGASRGHWLRVKGK*CLVARG
Trigger: ACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT...TAGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGCAGATCAGACACACATaGTCTCTGCATACACGAGGT +
Preference number: 4 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWQIRHT*SLHTRG
Trigger: ACCTCGTGTATGCAGAGACCATGTGTGTCTGATCTG...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CCA 90 bp TCTGTCCACCCCTTCCCATGCACTCTCGACTGCCTGGAGGATGTAGGCAGTCCGTCATTTCTCAAGGTCTaGCAGCAGGTCCTTCACTTG +
Preference number: 4 (lower is better)
Translates to: SVHPFPCTLDCLEDVGSPSFLKV*QQVLHL
Trigger: CAAGTGAAGGACCTGCTGCCAGACCTTGAGAAATGA...CGGACTGCCTACATCCTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CAA 72 bp ATGGTTCTCCGGTTGTGGTTGGCTCTTGTCGCCTTGTaGGCTTCCTTCTTCCTGCGTTCCTGGGTTGTCTCG +
Preference number: 4 (lower is better)
Translates to: MVLRLWLALVAL*ASFFLRSWVVS
Trigger: CGAGACAACCCAGGAACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGAGAACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACACGCAGAAGGGGAAATaGAGTGATCTTTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDTQKGK*SDLWIP
Trigger: AGGAATCCAAAGATCACTTCATTTCCCCTTCTGCGT...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR TCA 90 bp TGTAGAGCCTGTGGGTACCACAAGGATTCTTCAAGGCCACCTCTCATGTGGGTCCCTTCACTTGGGAGATaGGAGAGTCCAGTTCCACCC +
Preference number: 4 (lower is better)
Translates to: CRACGYHKDSSRPPLMWVPSLGR*ESPVPP
Trigger: GGGTGGAACTGGACTCTCTCATCTCCCAAGTGAAGG...GACCCACATGAGAGGTGGCCTTGAAGAATCCTTGTGGTACCCACAGGCTCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTGGTCACCAAGAAGCTTaGTATCTTCAAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SCGPRFGALALGLHPHLFGHQEA*YLQASS
Trigger: AGAGGAGGCTTGAAGATAGCAAGCTTCTTGGTGACC...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TGTAGAGCCTGTGGGTACCACAAGGATTCTTCAAGGCCACCTCTCATGTGGGTCGAATGGGAGAGCCTCTaGCACAGGTCACCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: CRACGYHKDSSRPPLMWVEWESL*HRSPRS
Trigger: GCTTCTTGGTGACCTGTGGCAGAGGCTCTCCCATTC...GACCCACATGAGAGGTGGCCTTGAAGAATCCTTGTGGTACCCACAGGCTCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp CCAGAATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCATTGGCTACGAACCATGCACTCTCGACTaGCTGGAGGATGTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PEFIVRQGQEPVEVIGYEPCTLD*LEDVGS
Trigger: ACTGCCTACATCCTCCAGGCAGTCGAGAGTGCATGG...TTCGTAGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GTTTGTATAACACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCACCGCTGTGCCGCCACTaGACGCTTGTCGTTCAGCAA +
Preference number: 4 (lower is better)
Translates to: VCITQNTGLPSARGGEFPPLCRH*TLVVQQ
Trigger: TTGCTGAACGACAAGCGTGCAGTGGCGGCACAGCGG...TGGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGTTATACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp CTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGATTCTCAGGATGGGATCATaGCTTTGCTCCTCTTGCGGT +
Preference number: 4 (lower is better)
Translates to: LLGVASFQTVEPVGTTRILRMGS*LCSSCG
Trigger: ACCGCAAGAGGAGCAAAGGCATGATCCCATCCTGAG...AATCCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GGTAGGAGTCCAGGCACTTCTGTAGAGTCTCGTCAAAGATCACCTGGCACCAGAAGGCACTGTGTGTTCTaGAGGAAGGCGCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: GRSPGTSVESRQRSPGTRRHCVF*RKALMA
Trigger: AGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCT...TCTGGTGCCAGGTGATCTTTGACGAGACTCTACAGAAGTGCCTGGACTCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp GGTAGGAGTCCAGGCACTTCTGTAGAGTCTCGTCAAAGATCACCTGGCACCAGACATTGGCTACGAAGGTaGCGCGTTCCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: GRSPGTSVESRQRSPGTRHWLRR*RVPGTP
Trigger: AGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATG...TCTGGTGCCAGGTGATCTTTGACGAGACTCTACAGAAGTGCCTGGACTCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR CCA 90 bp CACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCATTGGCTACGAAGGTaGCGCGTTCCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: HKIPVCLLLGVASFQTVEHWLRR*RVPGTP
Trigger: AGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATG...CTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCGAGGTCCAGGATCTTTaGAATGTCAAAGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: GKWCLVARGLGRLPWDSIEVQDL*NVKEEV
Trigger: AACTTCCTCTTTGACATTCCAAAGATCCTGGACCTC...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CCA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTTTTCCTATCATCTTCTaGAGCAGTGGTGAGTTGCCT +
Preference number: 4 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALFPIIF*SSGELP
Trigger: AGGCAACTCACCACTGCTCCAGAAGATGATAGGAAA...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GAGCTGTCATGCCGGTACCCTTTCTTGGCGAGAAAGGCCATGCGCCTGGCTTCTTGCAAACCACAGTGCTaGAGGATATTGCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: ELSCRYPFLARKAMRLASCKPQC*RILLKT
Trigger: GGTCTTCAGCAATATCCTCCAGCACTGTGGTTTGCA...AGAAGCCAGGCGCATGGCCTTTCTCGCCAAGAAAGGGTACCGGCATGACAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGTGCAAACCACAGTGCTaGAGGATATTGCTGAAGACC +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQCKPQC*RILLKT
Trigger: GGTCTTCAGCAATATCCTCCAGCACTGTGGTTTGCA...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAAGGCCCAAAGTGTaGTGCAGGTATCACAAAGGT +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQERPKV*CRYHKG
Trigger: ACCTTTGTGATACCTGCACCACACTTTGGGCCTTTC...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CCACGGGGAAGAGTGCATCATAGTCCCGGAGGAACCTCTTCTCCTGCAGCAAGGCAAAAGTCGTGCTTCTaGAAGGTCTGGCAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: PRGRVHHSPGGTSSPAARQKSCF*KVWQAK
Trigger: TTTGGCTTGCCAGACCTTCCAGAAGCACGACTTTTG...CCTTGCTGCAGGAGAAGAGGTTCCTCCGGGACTATGATGCACTCTTCCCCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGCCATTAGCTTCTTCCTaGAATGGGAGAGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMPLASS*NGRASA
Trigger: GGCAGAGGCTCTCCCATTCCAGGAAGAAGCTAATGG...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGTCAAACTCGTCATTCTaGAAGACGTTGTGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQSNSSF*KTLWRD
Trigger: GTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGA...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GCTGAACACATCAAACTCGTCATTCTGGAAGACGTTGTGGCGAGACGTCAGCAGCTGAGGGATGGTGAATaGCCTGCGGCTGATGAGCTC +
Preference number: 4 (lower is better)
Translates to: AEHIKLVILEDVVARRQQLRDGE*PAADEL
Trigger: GAGCTCATCAGCCGCAGGCCATTCACCATCCCTCAG...CTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTTTCTCCGGTTGTGGTTaGCTCTTGTCGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFFSGCG*LLSPCW
Trigger: CCAACAAGGCGACAAGAGCCAACCACAACCGGAGAA...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GTTTGTATAACACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCAGAAGGCGCTCATGGCTaGCTGGTAGATGAGAGGCGG +
Preference number: 4 (lower is better)
Translates to: VCITQNTGLPSARGGEFPEGAHG*LVDERR
Trigger: CCGCCTCTCATCTACCAGCCAGCCATGAGCGCCTTC...TGGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGTTATACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGCAGATCAGACACACATaGTCTCTGCATACACGAGGT +
Preference number: 4 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWQIRHT*SLHTRG
Trigger: ACCTCGTGTATGCAGAGACCATGTGTGTCTGATCTG...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397771.6
ENST00000458594.5
3UTR CAA 72 bp CTGCTGAACACATCAAACTCGTCATTCTGGAAGACGTaGTGGCGAGACGTCAGCAGGGGTGTAGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LLNTSNSSFWKT*WRDVSRGVGSG
Trigger: ACCAGACCCTACACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTTCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTCTTCTGGAGCAGTGGTaGGTTGCCTTTTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFLLEQW*VAFSKE
Trigger: CTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAG...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGGGCTGAGCGATGGAGGCGCTTCTaGATGTCAACAACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RKTLRWRRFCMSTTSGAERWRRF*MSTTSG
Trigger: CCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCG...CTCAGCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR GCA 90 bp GGACATAGCGCAGGTAGGAGTCCAGGCACTTCTGTAGAGTCTCGTCAAAGATCACGATGGAGGCGCTTCTaGATGTCAACAACCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GHSAGRSPGTSVESRQRSRWRRF*MSTTSG
Trigger: CCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCG...TGATCTTTGACGAGACTCTACAGAAGTGCCTGGACTCCTACCTGCGCTATGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR GCA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCCTCCTCTTCTTAATTaGAGACTCCATTTCGGGAAT +
Preference number: 4 (lower is better)
Translates to: ACLPAPRILRLWHKALCVPPLLN*RLHFGN
Trigger: ATTCCCGAAATGGAGTCTGCAATTAAGAAGAGGAGG...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp AGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGATTCTTCAAGGCCACCTCGGCCTTCTCAGGGGCTaGAAAGCTGAGGCTGTTGAG +
Preference number: 4 (lower is better)
Translates to: SFQTVEPVGTTRILQGHLGLLRG*KAEAVE
Trigger: CTCAACAGCCTCAGCTTTGCAGCCCCTGAGAAGGCC...GAGGTGGCCTTGAAGAATCCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp AGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGGGCTGAGGACACACATGGTCTCTaGATACACGAGGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: RKTLRWRRFCMSTTSGAEDTHGL*IHEVAS
Trigger: CGAGGCCACCTCGTGTATGCAGAGACCATGTGTGTC...CTCAGCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453160.5
CDS-3UTR GCA 90 bp GTTTGTATAACACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCAGCAGAGCTGGCATTGTaGTGCGTGACCCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: VCITQNTGLPSARGGEFPAELAL*CVTLLK
Trigger: CTTCAGGAGGGTCACGCAGCACAATGCCAGCTCTGC...TGGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGTTATACAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454854.5
CDS-3UTR GCA 90 bp GCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGATTCTTCAAGGCCACCCTCTCATGTGGGTCTaGAGGACCCCCTCCCATTTA +
Preference number: 4 (lower is better)
Translates to: ASFQTVEPVGTTRILQGHPLMWV*RTPSHL
Trigger: TAAATGGGAGGGGGTCCTGCAGACCCACATGAGAGG...GTGGCCTTGAAGAATCCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS-3UTR CCA 90 bp GGTTTGTATAACACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCGTCTTCGGGTCCTTGTaGGTGATCTGGAGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GLYNTKYRSAFCSGWRVSVFGSL*VIWSWS
Trigger: GGACCAACTCCAGATCACCCACAAGGACCCGAAGAC...GGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGTTATACAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS-3UTR CCA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTAGAAAAACACTTCGATaGAGGCGCTTCTGCATGTCA +
Preference number: 4 (lower is better)
Translates to: SCGPRFGALALGLHPHLFRKTLR*RRFCMS
Trigger: TGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCT...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCGTCACTGTAGTAACTTaGCTGCTGTGTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: GKWCLVARGLGRLPWDSIVTVVT*LLCKDV
Trigger: AACATCTTTACACAGCAGCCAAGTTACTACAGTGAC...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTGTCACTGTAGTAACTTaGCTGCTGTGTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSVTVVT*LLCKDV
Trigger: AACATCTTTACACAGCAGCCAAGTTACTACAGTGAC...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp CTGGAAGGTCTGGCAAGCCAAAGGGAAGATATCCAGAAAGGCCCAAAGTGTGGTAGCTTCTTCCTGGAATaGGAGAGCCTCTGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LEGLASQREDIQKGPKCGSFFLE*ESLCHR
Trigger: CCTGTGGCAGAGGCTCTCCCATTCCAGGAAGAAGCT...ACCACACTTTGGGCCTTTCTGGATATCTTCCCTTTGGCTTGCCAGACCTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTTGGTTCAGGATGATGTaGAAAATCTCCATTAGCTTC +
Preference number: 4 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSWFRMM*KISISF
Trigger: GAAGCTAATGGAGATTTTCCACATCATCCTGAACCA...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGCTCCTCAATCACCGATaGGTCTTTAGCATCTGTGGC +
Preference number: 4 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMLLNHR*VFSICG
Trigger: GCCACAGATGCTAAAGACCCATCGGTGATTGAGGAG...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGAGAGGTCCAGGATTTTaGATTCCTTGTGAGTGGACA +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQRGPGF*IPCEWT
Trigger: TGTCCACTCACAAGGAATCCAAAATCCTGGACCTCT...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542393.5
CDS-3UTR TCA 90 bp GAAGGTGAGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGCACCAGAATTTATCGTaGGGCAAGGCCAGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EGEKNTSMEALLHVNNLRHQNLS*GKARSQ
Trigger: CTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTG...CCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR TCA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGACATGCGGAGGAAGGTaGGAAAAACACTTCGATGGA +
Preference number: 4 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMTCGGR*EKHFDG
Trigger: TCCATCGAAGTGTTTTTCTCACCTTCCTCCGCATGT...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp TCCGGTTGTGGTTGGCTCTTGTCGCCTTGTTGGCTTCCTTCTTCCTGCGTTCCTGAAGGAACTCTTCGATaGAGCCCTGAATGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: SGCGWLLSPCWLPSSCVPEGTLR*SPECCH
Trigger: GTGACAACATTCAGGGCTTCATCGAAGAGTTCCTTC...AGGAACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAACCACAACCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp TCCACTAGGGCGGGAATGTTGTCTTTAGGGGGCGGTTTGTATAACACAAAATACTTGGCCCCGTCCCCTTaGAAACCACAGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: STRAGMLSLGGGLYNTKYLAPSP*KPQCWR
Trigger: CCTCCAGCACTGTGGTTTGCAAGGGGACGGGGCCAA...GTATTTTGTGTTATACAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTCTCCATTTCGGGAATTaGTGCTTCGTAGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFLHFGN*CFVEGS
Trigger: GCTTCCTTCTACGAAGCAGCAATTCCCGAAATGGAG...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR GCA 90 bp TCACCTGGCACCAGAATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCATCTCCATTTCGGGAATTaGTGCTTCGTAGAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SPGTRIYREARPGASRGHLHFGN*CFVEGS
Trigger: GCTTCCTTCTACGAAGCAGCAATTCCCGAAATGGAG...ATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTGCCAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GTTTGTATAACACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCATGGCGCCCACCTGGTTaGCATCGTATGTGTCATCGT +
Preference number: 4 (lower is better)
Translates to: VCITQNTGLPSARGGEFPWRPPG*HRMCHR
Trigger: ACGATGACACATACGATGGCAACCAGGTGGGCGCCA...TGGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGTTATACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp CCGCCACTGCACGCTTGTCGTTCAGCAAACTCCGCGTGTTTTCCTCCTTCCTGGGAGGTCCAGGATCTTTaGAATGTCAAAGAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: PPLHACRSANSACFPPSWEVQDL*NVKEEV
Trigger: AACTTCCTCTTTGACATTCCAAAGATCCTGGACCTC...CCAGGAAGGAGGAAAACACGCGGAGTTTGCTGAACGACAAGCGTGCAGTGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGTCACTGTAGTAACTTaGCTGCTGTGTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALVTVVT*LLCKDV
Trigger: AACATCTTTACACAGCAGCCAAGTTACTACAGTGAC...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTCAAAAGTCGTGCTTCTaGAAGGTCTGGCAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFQKSCF*KVWQAK
Trigger: TTTGGCTTGCCAGACCTTCCAGAAGCACGACTTTTG...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GTGCTTCTGGAAGGTCTGGCAAGCCAAAGGGAAGATATCCAGAAAGGCCCAAAGCCATTAGCTTCTTCCTaGAATGGGAGAGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VLLEGLASQREDIQKGPKPLASS*NGRASA
Trigger: GGCAGAGGCTCTCCCATTCCAGGAAGAAGCTAATGG...CTTTGGGCCTTTCTGGATATCTTCCCTTTGGCTTGCCAGACCTTCCAGAAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGTGGTTCAGGATGATGTaGAAAATCTCCATTAGCTTC +
Preference number: 4 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWWFRMM*KISISF
Trigger: GAAGCTAATGGAGATTTTCCACATCATCCTGAACCA...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGTGGTTCAGGATGATGTaGAAAATCTCCATTAGCTTC +
Preference number: 4 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRWFRMM*KISISF
Trigger: GAAGCTAATGGAGATTTTCCACATCATCCTGAACCA...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp GAGGAAGGTGAGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCCAGAGTCTGCATCATTaGCGCCCACCTGGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: EEGEKNTSMEALLHVNNLQSLHH*RPPGCH
Trigger: ATGGCAACCAGGTGGGCGCCAATGATGCAGACTCTG...GAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp AGATCACCTGGCACCAGAATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCAGATCAGACACACATaGTCTCTGCATACACGAGGT +
Preference number: 4 (lower is better)
Translates to: RSPGTRIYREARPGASRGQIRHT*SLHTRG
Trigger: ACCTCGTGTATGCAGAGACCATGTGTGTCTGATCTG...ACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTGCCAGGTGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR TCA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTACGCAGAAGGGGAAATaGAGTGATCTTTGGATTCCT +
Preference number: 4 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFTQKGK*SDLWIP
Trigger: AGGAATCCAAAGATCACTTCATTTCCCCTTCTGCGT...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR TCA 90 bp GGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGATTCTTCAACTTCTGGAGCAGTGGTaGGTTGCCTTTTCCAAAGAG +
Preference number: 4 (lower is better)
Translates to: GVASFQTVEPVGTTRILQLLEQW*VAFSKE
Trigger: CTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAG...TTGAAGAATCCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp GGTGAGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGGGCATATTGCTGAAGACCTaGAGGATGGTAGGCAGGGTT +
Preference number: 4 (lower is better)
Translates to: GEKNTSMEALLHVNNLRGILLKT*RMVGRV
Trigger: AACCCTGCCTACCATCCTTCAGGTCTTCAGCAATAT...GCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp GCTGAAGATCTGAAGGAACTCTTCGATGAAGCCCTGAATGTTGTCACAGCTGCTGTGATGATGCTTGACTaGCTGCCTCTGCTGTCACCG +
Preference number: 4 (lower is better)
Translates to: AEDLKELFDEALNVVTAAVMMLD*LPLLSP
Trigger: CGGTGACAGCAGAGGCAGTCAGTCAAGCATCATCAC...AGCAGCTGTGACAACATTCAGGGCTTCATCGAAGAGTTCCTTCAGATCTTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp CTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGCCTCCTCTTCTTAATTaGAGACTCCATTTCGGGAAT +
Preference number: 4 (lower is better)
Translates to: LLLGVASFQTVEPVGTTRPPLLN*RLHFGN
Trigger: ATTCCCGAAATGGAGTCTGCAATTAAGAAGAGGAGG...CCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GGTGAGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGGGCGGTCACCAAGAAGCTTaGTATCTTCAAGCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GEKNTSMEALLHVNNLRGGHQEA*YLQASS
Trigger: AGAGGAGGCTTGAAGATAGCAAGCTTCTTGGTGACC...GCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp TCCACTAGGGCGGGAATGTTGTCTTTAGGGGGCGGTTTGTATAACACAAAATACCACAAAATACCGGTCTaGCTTCTGCTCGGGGTGGCG +
Preference number: 4 (lower is better)
Translates to: STRAGMLSLGGGLYNTKYHKIPV*LLLGVA
Trigger: CGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTG...GTATTTTGTGTTATACAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS-3UTR CCA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGGTCACTGTAGTAACTTaGCTGCTGTGTAAAGATGTT +
Preference number: 4 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWVTVVT*LLCKDV
Trigger: AACATCTTTACACAGCAGCCAAGTTACTACAGTGAC...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGTGGTTCAGGATGATGTaGAAAATCTCCATTAGCTTC +
Preference number: 4 (lower is better)
Translates to: LPAPRILRLWHKALCVLQWFRMM*KISISF
Trigger: GAAGCTAATGGAGATTTTCCACATCATCCTGAACCA...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CCA 90 bp AACACATCAAACTCGTCATTCTGGAAGACGTTGTGGCGAGACGTCAGCAGGGGTCGGATTCTTCGGCTGTaGCATAAGGCACTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: NTSNSSFWKTLWRDVSRGRILRL*HKALCV
Trigger: AACACACAGTGCCTTATGCCACAGCCGAAGAATCCG...ACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CAA 72 bp TCCACTAGGGCGGGAATGTTGTCTTTAGGGGGCGGTTaGTATAACACAAAATACCGGTCTGCCTTCTGCTCG +
Preference number: 4 (lower is better)
Translates to: STRAGMLSLGGG*YNTKYRSAFCS
Trigger: CGAGCAGAAGGCAGACCGGTATTTTGTGTTATACAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000453160.5
ENST00000454854.5
ENST00000458594.5
3UTR CAA 72 bp GCGCGTTCCAGGTACTCCTCCACTAGGGCGGGAATGTaGTCTTTAGGGGGCGGTTTGTATAACACAAAATAC +
Preference number: 4 (lower is better)
Translates to: ARSRYSSTRAGM*SLGGGLYNTKY
Trigger: GTATTTTGTGTTATACAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGTGGAGGAGTACCTGGAACGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR GCA 90 bp GCTGAACACATCAAACTCGTCATTCTGGAAGACGTTGTGGCGAGACGTCAGCAGCCTTGCAAACCACAGTaGTGGAGGATATTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: AEHIKLVILEDVVARRQQPCKPQ*WRILLK
Trigger: CTTCAGCAATATCCTCCAGCACTGTGGTTTGCAAGG...CTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGGGCTGAGGGAATGTTGTCACAGCTaGTTTCTAGGATGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: EKHFDGGASACQQPQGLRECCHS*FLGWEG
Trigger: TCCTTCCCATCCTAGAAAGCAGCTGTGACAACATTC...CCTCAGCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GAAGTTATTGTAGAGGATTTCTCCAAACGCAGAAGGGGAAATGAAGTGATCTTTGCCCACAGCCGCGGCTaGTCCCATGCACTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EVIVEDFSKRRRGNEVIFAHSRG*SHALLF
Trigger: GAAGAGGAGTGCATGGGAGCAGCCGCGGCTGTGGGC...AAAGATCACTTCATTTCCCCTTCTGCGTTTGGAGAAATCCTCTACAATAACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp ATGTTGTCTTTAGGGGGCGGTTTGTATAACACAAAATACCGGTCTGCCTTCTGCTCCTTGTGGGTGATCTaGAGTTGGTCCAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: MLSLGGGLYNTKYRSAFCSLWVI*SWSRGR
Trigger: TCTGCCCCTGGACCAACTCCAGATCACCCACAAGGA...GCAGAAGGCAGACCGGTATTTTGTGTTATACAAACCGCCCCCTAAAGACAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS-3UTR CCA 90 bp GTCTGTAACAAAAGTCGTGCTTCTGGAAGGTCTGGCAAGCCAAAGGGAAGATATTCCTTGTGGGTGATCTaGAGTTGGTCCAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: VCNKSRASGRSGKPKGRYSLWVI*SWSRGR
Trigger: TCTGCCCCTGGACCAACTCCAGATCACCCACAAGGA...ATATCTTCCCTTTGGCTTGCCAGACCTTCCAGAAGCACGACTTTTGTTACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp AGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGGGCTGAGTGCTTCTGGAAGGTCTaGCAAGCCAAAGGGAAGATA +
Preference number: 4 (lower is better)
Translates to: RKTLRWRRFCMSTTSGAECFWKV*QAKGKI
Trigger: TATCTTCCCTTTGGCTTGCCAGACCTTCCAGAAGCA...CTCAGCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGAGATCTGGTTCAGGATaGTGTGGAAAATCTCCATTA +
Preference number: 4 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMRSGSG*CGKSPL
Trigger: TAATGGAGATTTTCCACATCATCCTGAACCAGATCT...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTAGATCTGGTTCAGGATaGTGTGGAAAATCTCCATTA +
Preference number: 4 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFRSGSG*CGKSPL
Trigger: TAATGGAGATTTTCCACATCATCCTGAACCAGATCT...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR TCA 90 bp AGATCACCTGGCACCAGAATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTAGATCTGGTTCAGGATaGTGTGGAAAATCTCCATTA +
Preference number: 4 (lower is better)
Translates to: RSPGTRIYREARPGASRGRSGSG*CGKSPL
Trigger: TAATGGAGATTTTCCACATCATCCTGAACCAGATCT...ACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTGCCAGGTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR TCA 90 bp ATGTTGTCTTTAGGGGGCGGTTTGTATAACACAAAATACCGGTCTGCCTTCTGCGGATGTGATGATGCTTaGCTGACTGCCTCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: MLSLGGGLYNTKYRSAFCGCDDA*LTASAV
Trigger: GACAGCAGAGGCAGTCAGTCAAGCATCATCACATCC...GCAGAAGGCAGACCGGTATTTTGTGTTATACAAACCGCCCCCTAAAGACAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp GCGGTTTGTATAACACAAAATACCGGTCTGCCTTCTGCTCGGGGTGCTCACAGTAGAAAAACACTTCGATaGAGGCGCTTCTGCATGTCA +
Preference number: 4 (lower is better)
Translates to: AVCITQNTGLPSARGAHSRKTLR*RRFCMS
Trigger: TGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCT...ACTGTGAGCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGTTATACAAACCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453160.5
CDS-3UTR CCA 90 bp AACACATCAAACTCGTCATTCTGGAAGACGTTGTGGCGAGACGTCAGCAGGGGTAGAAAAACACTTCGATaGAGGCGCTTCTGCATGTCA +
Preference number: 4 (lower is better)
Translates to: NTSNSSFWKTLWRDVSRGRKTLR*RRFCMS
Trigger: TGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCT...ACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CCA 90 bp TCCACTAGGGCGGGAATGTTGTCTTTAGGGGGCGGTTTGTATAACACAAAATACTTCTCCGGTTGTGGTTaGCTCTTGTCGCCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: STRAGMLSLGGGLYNTKYFSGCG*LLSPCW
Trigger: CCAACAAGGCGACAAGAGCCAACCACAACCGGAGAA...GTATTTTGTGTTATACAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CAA 72 bp AAGATGTTTCCTATCATCTTCTGGAGCAGTGGTGAGTaGCCTTTTCCAAAGAGCACGCAGAGGTCCAGGATC +
Preference number: 4 (lower is better)
Translates to: KMFPIIFWSSGE*PFPKSTQRSRI
Trigger: GATCCTGGACCTCTGCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGAAACATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GAGTTGCCTTTTCCAAAGAGCACGCAGAGGTCCAGGATCTTTGGAATGTCAAAGCTTCTCTCTCAGCACTaGAGGGTCCTGAACAAAATG +
Preference number: 4 (lower is better)
Translates to: ELPFPKSTQRSRIFGMSKLLSQH*RVLNKM
Trigger: CATTTTGTTCAGGACCCTGCAGTGCTGAGAGAGAAG...CTTTGACATTCCAAAGATCCTGGACCTCTGCGTGCTCTTTGGAAAAGGCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GAGGAAGGTGAGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCCAAGGTCTCCTGTCTTaGTGTCCAGTGTTCTTTTCA +
Preference number: 4 (lower is better)
Translates to: EEGEKNTSMEALLHVNNLQGLLS*CPVFFS
Trigger: TGAAAAGAACACTGGACAGCAAGACAGGAGACCTTG...GAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000453160.5
CDS-3UTR CCA 90 bp GTCTGTAACAAAAGTCGTGCTTCTGGAAGGTCTGGCAAGCCAAAGGGAAGATATCTCCTCAATCACCGATaGGTCTTTAGCATCTGTGGC +
Preference number: 4 (lower is better)
Translates to: VCNKSRASGRSGKPKGRYLLNHR*VFSICG
Trigger: GCCACAGATGCTAAAGACCCATCGGTGATTGAGGAG...ATATCTTCCCTTTGGCTTGCCAGACCTTCCAGAAGCACGACTTTTGTTACAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
3UTR CAA 72 bp TGCCTTTTCCAAAGAGCACGCAGAGGTCCAGGATCTTaGGAATGTCAAAGAGGAAGTTATTGTAGAGGATTT +
Preference number: 4 (lower is better)
Translates to: CLFQRARRGPGS*ECQRGSYCRGF
Trigger: AAATCCTCTACAATAACTTCCTCTTTGACATTCCAAAGATCCTGGACCTCTGCGTGCTCTTTGGAAAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR GCA 90 bp GAAGTTATTGTAGAGGATTTCTCCAAACGCAGAAGGGGAAATGAAGTGATCTTTAGGCCCAAAGTGTGGTaGAGGTATCACAAAGGTAGA +
Preference number: 4 (lower is better)
Translates to: EVIVEDFSKRRRGNEVIFRPKVW*RYHKGR
Trigger: TCTACCTTTGTGATACCTGCACCACACTTTGGGCCT...AAAGATCACTTCATTTCCCCTTCTGCGTTTGGAGAAATCCTCTACAATAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS TCA 90 bp GTGCCGCCGCCGCCGCCGCCGCCGCCGACCACGGTGACAGCTCCCTaGGCGCCCGCACTTCCGGGGTCAAACTGCGATTCCGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: VPPPPPPPPTTVTAP*APALPGSNCDSAGA
Trigger: TGCTCCTGCGGAATCGCAGTTTGACCCCGGAAGTGCGGGCGCTCAGGGAGCTGTCACCGTGGTCGGCGGCGGCGGCGGCGGCGGCGGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542393.5
CDS-3UTR CAA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGCTTGTGGCCCGAGGTTaGGGGCGCTTGCCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWLVARG*GRLPWD
Trigger: GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAG...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCAGCCAGTCGAGGTCATaGGCTACGAAGGTGGCGCGT +
Preference number: 5 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPSQSRS*ATKVAR
Trigger: ACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCT...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CAA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGGCCGCCACTGCACGCTaGTCGTTCAGCAAACTCCGC +
Preference number: 5 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWAATAR*SFSKLR
Trigger: GCGGAGTTTGCTGAACGACAAGCGTGCAGTGGCGGC...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCGCCATGGTTCTCCGGTaGTGGTTGGCTCTTGTCGCC +
Preference number: 5 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPAMVLR*WLALVA
Trigger: GGCGACAAGAGCCAACCACAACCGGAGAACCATGGC...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCGATGGGATCATGCCTTaGCTCCTCTTGCGGTCGGCC +
Preference number: 5 (lower is better)
Translates to: GGPRRWEHGLVSLVPLPPDGIMP*LLLRSA
Trigger: GGCCGACCGCAAGAGGAGCAAAGGCATGATCCCATC...GGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGTCCTTCCTGGTGCTCTaGCCCTTGTGCACCCGGCTC +
Preference number: 5 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSSFLVL*PLCTRL
Trigger: GAGCCGGGTGCACAAGGGCAAGAGCACCAGGAAGGA...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGGGGGAAGGTGCCTGCTaGCCGGCCCCACGGATTCTT +
Preference number: 5 (lower is better)
Translates to: LAQLGEGACLPAPRILRLGEGAC*PAPRIL
Trigger: AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGAGGTTTGGGGCGCTaGCCTTGGGACTCCATCCCC +
Preference number: 5 (lower is better)
Translates to: PISFPLAQLGEGACLPAPRGLGR*PWDSIP
Trigger: GGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCG...TGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGCTTGTGGCCCGAGGTTaGGGGCGCTTGCCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: LAQLGEGACLPAPRILRLLVARG*GRLPWD
Trigger: GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAG...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGCCTGTCTTCGGGTCCTaGTGGGTGATCTGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWPVFGS*WVIWSW
Trigger: CCAACTCCAGATCACCCACAAGGACCCGAAGACAGG...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTCCTTCCTGGTGCTCTaGCCCTTGTGCACCCGGCTC +
Preference number: 5 (lower is better)
Translates to: LAQLGEGACLPAPRILRLSFLVL*PLCTRL
Trigger: GAGCCGGGTGCACAAGGGCAAGAGCACCAGGAAGGA...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGCCGCCACTGCACGCTaGTCGTTCAGCAAACTCCGC +
Preference number: 5 (lower is better)
Translates to: HLFPASAAGGRCLLAGPTAATAR*SFSKLR
Trigger: GCGGAGTTTGCTGAACGACAAGCGTGCAGTGGCGGC...CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp AGGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCTTGGCGCCCACCTGGTaGCCATCGTATGTGTCATCG +
Preference number: 5 (lower is better)
Translates to: RRPQAMGARPGESGAAASLAPTW*PSYVSS
Trigger: CGATGACACATACGATGGCAACCAGGTGGGCGCCAA...GGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGATGGGATCATGCCTTaGCTCCTCTTGCGGTCGGCC +
Preference number: 5 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSDGIMP*LLLRSA
Trigger: GGCCGACCGCAAGAGGAGCAAAGGCATGATCCCATC...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGAGGGGAAGTGGTGTCTaGTGGCCCGAGGTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: LAQLGEGACLPAPRILRLRGSGV*WPEVWG
Trigger: GCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGTCAGAGTCTGCATCATaGGCGCCCACCTGGTTGCCA +
Preference number: 5 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSSESAS*APTWLP
Trigger: TGGCAACCAGGTGGGCGCCAATGATGCAGACTCTGA...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGGTTCTCCGGTTGTGGTaGGCTCTTGTCGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWVLRLW*ALVALL
Trigger: CAACAAGGCGACAAGAGCCAACCACAACCGGAGAAC...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCAGGGGAAGGTGCCTGCTaGCCGGCCCCACGGATTCTT +
Preference number: 5 (lower is better)
Translates to: GEGACLPAPRILRLWHKAGEGAC*PAPRIL
Trigger: AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGGGGGAAGGTGCCTGCTaGCCGGCCCCACGGATTCTT +
Preference number: 5 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRGEGAC*PAPRIL
Trigger: AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACCTTGTGGCCCGAGGTTaGGGGCGCTTGCCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHLVARG*GRLPWD
Trigger: GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAG...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACGTGGGTGATCTGGAGTaGGTCCAGGGGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHVGDLE*VQGQSW
Trigger: CCAGCTCTGCCCCTGGACCAACTCCAGATCACCCAC...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGACTAGGGCGGGAATGTaGTCTTTAGGGGGCGGTTTG +
Preference number: 5 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSTRAGM*SLGGGL
Trigger: CAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGT...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CAA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTCCTTCCTGGTGCTCTaGCCCTTGTGCACCCGGCTC +
Preference number: 5 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHSFLVL*PLCTRL
Trigger: GAGCCGGGTGCACAAGGGCAAGAGCACCAGGAAGGA...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCATGCCGGCCACTGCTGTaGAGCTGTCATGCCGGTACC +
Preference number: 5 (lower is better)
Translates to: GEGACLPAPRILRLWHKACRPLL*SCHAGT
Trigger: GGTACCGGCATGACAGCTCAACAGCAGTGGCCGGCA...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGTCCTGCGTTCCTGGGTaGTCTCGCGGCTCTGCCCAT +
Preference number: 5 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRSCVPG*SRGSAH
Trigger: ATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGA...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp AGGAGGCCCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCTTGGCTCTTGTCGCCTaGTTGGCTTCCTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: RRPQAMGARPGESGAAASLALVA*LASFFL
Trigger: CAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAA...GGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGGGCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCGGTTGTGGTTGGCTCTaGTCGCCTTGTTGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: PHLFPASAAGGRCLLAGPGCGWL*SPCWLP
Trigger: AGGAAGCCAACAAGGCGACAAGAGCCAACCACAACC...GGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTGCCATGGTTCTCCGGTaGTGGTTGGCTCTTGTCGCC +
Preference number: 5 (lower is better)
Translates to: FPLAQLGEGACLPAPRILAMVLR*WLALVA
Trigger: GGCGACAAGAGCCAACCACAACCGGAGAACCATGGC...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCTTGTGGCCCGAGGTTaGGGGCGCTTGCCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: GSGVLWPEVWGACLGTPSLVARG*GRLPWD
Trigger: GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAG...GGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCAAGGGGAAGTGGTGTCTaGTGGCCCGAGGTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: GEGACLPAPRILRLWHKARGSGV*WPEVWG
Trigger: GCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGAGGGGAAGTGGTGTCTaGTGGCCCGAGGTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRRGSGV*WPEVWG
Trigger: GCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS CCA 90 bp CTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTaGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGC +
Preference number: 5 (lower is better)
Translates to: LGEGACLPAPRILRL*HKALCVLQEGAHGC
Trigger: GCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000472433.5
CDS-3UTR CAA 90 bp CCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGTGGAGCAGTGGTGAGTaGCCTTTTCCAAAGAGCACG +
Preference number: 5 (lower is better)
Translates to: PASAAGGRCLLAGPTDSSWSSGE*PFPKST
Trigger: CGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCA...CGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGATTTCTCTGTCTAGGTaGCGGTCCAGCTGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: HLFPASAAGGRCLLAGPTISLSR*RSSWLR
Trigger: CCTCAGCCAGCTGGACCGCAACCTAGACAGAGAAAT...CGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR CAA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCACTGGTGCTCTTGCCCTaGTGCACCCGGCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPLVLLP*CTRLRS
Trigger: AGACCTGAGCCGGGTGCACAAGGGCAAGAGCACCAG...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCTGGTGCTCTTGCCCTaGTGCACCCGGCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: GKWCLVARGLGRLPWDSILVLLP*CTRLRS
Trigger: AGACCTGAGCCGGGTGCACAAGGGCAAGAGCACCAG...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTTGCCGGCCACTGCTGTaGAGCTGTCATGCCGGTACC +
Preference number: 5 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSCRPLL*SCHAGT
Trigger: GGTACCGGCATGACAGCTCAACAGCAGTGGCCGGCA...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCTGCCGGCCACTGCTGTaGAGCTGTCATGCCGGTACC +
Preference number: 5 (lower is better)
Translates to: GKWCLVARGLGRLPWDSICRPLL*SCHAGT
Trigger: GGTACCGGCATGACAGCTCAACAGCAGTGGCCGGCA...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCCTGCGTTCCTGGGTaGTCTCGCGGCTCTGCCCAT +
Preference number: 5 (lower is better)
Translates to: WCLVARGLGRLPWDSIPISCVPG*SRGSAH
Trigger: ATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGA...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCTCCTGCGTTCCTGGGTaGTCTCGCGGCTCTGCCCAT +
Preference number: 5 (lower is better)
Translates to: GKWCLVARGLGRLPWDSISCVPG*SRGSAH
Trigger: ATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGA...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGGTTCTCCGGTTGTGGTaGGCTCTTGTCGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LAQLGEGACLPAPRILRLVLRLW*ALVALL
Trigger: CAACAAGGCGACAAGAGCCAACCACAACCGGAGAAC...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACCGAGGTTTGGGGCGCTaGCCTTGGGACTCCATCCCC +
Preference number: 5 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDRGLGR*PWDSIP
Trigger: GGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCG...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTAGGGGAAGTGGTGTCTaGTGGCCCGAGGTTTGGGGC +
Preference number: 5 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSRGSGV*WPEVWG
Trigger: GCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS CCA 90 bp GACCCTCCTGTTCCAGCTCTAGGATCCCAGCAGATCAGACACACATaGTCTCTGCATACACGAGGTGGCCTCGGCGGCTCCACCACCGGC +
Preference number: 5 (lower is better)
Translates to: DPPVPALGSQQIRHT*SLHTRGGLGGSTTG
Trigger: GCCGGTGGTGGAGCCGCCGAGGCCACCTCGTGTATGCAGAGACCATGTGTGTCTGATCTGCTGGGATCCTAGAGCTGGAACAGGAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397771.6
CDS CCA 90 bp AAGGTCTCCTGTCTTGCTGTCCAGTGTTCTTTTCACAATATCACTTaGCCTCGGCGGCTCCACCACCGGCTCTGTGCCGCCGCCGCCGCC +
Preference number: 5 (lower is better)
Translates to: KVSCLAVQCSFHNIT*PRRLHHRLCAAAAA
Trigger: GGCGGCGGCGGCGGCACAGAGCCGGTGGTGGAGCCGCCGAGGCCAAGTGATATTGTGAAAAGAACACTGGACAGCAAGACAGGAGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS-3UTR CAA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCCTGTCTTCGGGTCCTaGTGGGTGATCTGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRPVFGS*WVIWSW
Trigger: CCAACTCCAGATCACCCACAAGGACCCGAAGACAGG...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCCCTGTCTTCGGGTCCTaGTGGGTGATCTGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: WDSIPISFPLAQLGEGACPVFGS*WVIWSW
Trigger: CCAACTCCAGATCACCCACAAGGACCCGAAGACAGG...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CGAGGTCATTGGCTACGAAGGTGGCGCGTTCCAGGTACTCCTCCACTAGGGCGGAGCCAGTCGAGGTCATaGGCTACGAAGGTGGCGCGT +
Preference number: 5 (lower is better)
Translates to: RGHWLRRWRVPGTPPLGRSQSRS*ATKVAR
Trigger: ACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCT...CCGCCCTAGTGGAGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGACCTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR CAA 90 bp AGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCAATTGGCCCCGTCCCCTaGCAAACCACAGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: RGSGVLWPEVWGACLGTPIGPVP*QTTVLE
Trigger: CTCCAGCACTGTGGTTTGCAAGGGGACGGGGCCAAT...TGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCATTGGCCCCGTCCCCTaGCAAACCACAGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: WCLVARGLGRLPWDSIPIIGPVP*QTTVLE
Trigger: CTCCAGCACTGTGGTTTGCAAGGGGACGGGGCCAAT...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTTCCTTCCTGGTGCTCTaGCCCTTGTGCACCCGGCTC +
Preference number: 5 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALSFLVL*PLCTRL
Trigger: GAGCCGGGTGCACAAGGGCAAGAGCACCAGGAAGGA...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGCCGCCACTGCACGCTaGTCGTTCAGCAAACTCCGC +
Preference number: 5 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWAATAR*SFSKLR
Trigger: GCGGAGTTTGCTGAACGACAAGCGTGCAGTGGCGGC...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTGCCGGTACCCTTTCTaGGCGAGAAAGGCCATGCGC +
Preference number: 5 (lower is better)
Translates to: WCLVARGLGRLPWDSIPICRYPF*ARKAMR
Trigger: GCGCATGGCCTTTCTCGCCAAGAAAGGGTACCGGCA...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TCTGTCCACCCCTTCCCATGCACTCTCGACTGCCTGGAGGATGTAGGCAGTCCGTGCCGGCCACTGCTGTaGAGCTGTCATGCCGGTACC +
Preference number: 5 (lower is better)
Translates to: SVHPFPCTLDCLEDVGSPCRPLL*SCHAGT
Trigger: GGTACCGGCATGACAGCTCAACAGCAGTGGCCGGCA...CGGACTGCCTACATCCTCCAGGCAGTCGAGAGTGCATGGGAAGGGGTGGACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CAA 90 bp GGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCGCCATGGTTCTCCGGTaGTGGTTGGCTCTTGTCGCC +
Preference number: 5 (lower is better)
Translates to: GSGVLWPEVWGACLGTPSAMVLR*WLALVA
Trigger: GGCGACAAGAGCCAACCACAACCGGAGAACCATGGC...GGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCGCCATGGTTCTCCGGTaGTGGTTGGCTCTTGTCGCC +
Preference number: 5 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSAMVLR*WLALVA
Trigger: GGCGACAAGAGCCAACCACAACCGGAGAACCATGGC...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCAATGCCTTTGCTCCTCTaGCGGTCGGCCATGGTTCTC +
Preference number: 5 (lower is better)
Translates to: GEGACLPAPRILRLWHKAMPLLL*RSAMVL
Trigger: GAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCAT...TGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTTTTGGGGCGCTTGCCTaGGGACTCCATCCCCATCTC +
Preference number: 5 (lower is better)
Translates to: GVLWPEVWGACLGTPSPSFGALA*GLHPHL
Trigger: GAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAA...AGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTTTGGGGCGCTTGCCTaGGGACTCCATCCCCATCTC +
Preference number: 5 (lower is better)
Translates to: WCLVARGLGRLPWDSIPIFGALA*GLHPHL
Trigger: GAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAA...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCTTTGGGGCGCTTGCCTaGGGACTCCATCCCCATCTC +
Preference number: 5 (lower is better)
Translates to: GKWCLVARGLGRLPWDSIFGALA*GLHPHL
Trigger: GAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAA...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS GCA 90 bp TACCTCCTCCACCACCACGCTGTACTGCTCGTAGCGCTGCCGCTGTaGCGCCACTGCACGCTTGTCGTTCAGCAAACTCCGCGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: YLLHHHAVLLVALPL*RHCTLVVQQTPRVF
Trigger: GAAAACACGCGGAGTTTGCTGAACGACAAGCGTGCAGTGGCGGCACAGCGGCAGCGCTACGAGCAGTACAGCGTGGTGGTGGAGGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487486.5
CDS CCA 90 bp GTCCTCAGCTTTCCTGTCTTCGGGTCCTTGTGGGTGATCTGGAGTTaGTCCAGGGGCAGAGCTGGCATTGTGCTGCGTGACCCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: VLSFPVFGSLWVIWS*SRGRAGIVLRDPPR
Trigger: CCGAGGAGGGTCACGCAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307790.8
ENST00000542393.5
CDS CCA 90 bp GCCAGGATGAAGCCCTCACCAAGGTCTGGCAGCAGGTCCTTCACTTaGGAGATGAGAGAGTCCAGTTCCACCCCACACATGGCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: ARMKPSPRSGSRSFT*EMRESSSTPHMAGP
Trigger: GGGCCCTGCCATGTGTGGGGTGGAACTGGACTCTCTCATCTCCCAAGTGAAGGACCTGCTGCCAGACCTTGGTGAGGGCTTCATCCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000487486.5
ENST00000542393.5
CDS CCA 90 bp GGTGGGGGCCAGCCGCTCCTCCAGGATATTGTTGATCACCTGCTCTaGGTCGTAGTGGTAGTACTCCAGGCAGGCCAGGATGAAGCCCTC +
Preference number: 5 (lower is better)
Translates to: GGGQPLLQDIVDHLL*VVVVVLQAGQDEAL
Trigger: GAGGGCTTCATCCTGGCCTGCCTGGAGTACTACCACTACGACCCAGAGCAGGTGATCAACAATATCCTGGAGGAGCGGCTGGCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000487486.5
ENST00000542393.5
CDS CCA 90 bp ACTTGGCCTGTTCCAGCTCTAGGATCCCAGCAGATCAGACACACATaGTCTCTGCATACACGAGGTGGCCTCGGCGGCTCCACCACCGGC +
Preference number: 5 (lower is better)
Translates to: TWPVPALGSQQIRHT*SLHTRGGLGGSTTG
Trigger: GCCGGTGGTGGAGCCGCCGAGGCCACCTCGTGTATGCAGAGACCATGTGTGTCTGATCTGCTGGGATCCTAGAGCTGGAACAGGCCAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000449900.6
ENST00000453160.5
CDS-3UTR CAA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGTGGGTGATCTGGAGTaGGTCCAGGGGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LPAPRILRLWHKALCVLQVGDLE*VQGQSW
Trigger: CCAGCTCTGCCCCTGGACCAACTCCAGATCACCCAC...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CCCAGGCGATGGGAGCACGGCCTGGTGAGTCTGGTGCCGCTGCCTCCCCACTGGTCTTTAGGGGGCGGTTaGTATAACACAAAATACCGG +
Preference number: 5 (lower is better)
Translates to: PRRWEHGLVSLVPLPPHWSLGGG*YNTKYR
Trigger: CCGGTATTTTGTGTTATACAAACCGCCCCCTAAAGA...CCAGTGGGGAGGCAGCGGCACCAGACTCACCAGGCCGTGCTCCCATCGCCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CAA 90 bp TTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTTGGAGCAGTGGTGAGTaGCCTTTTCCAAAGAGCACG +
Preference number: 5 (lower is better)
Translates to: FPLAQLGEGACLPAPRILWSSGE*PFPKST
Trigger: CGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCA...AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTATTGGCCCCGTCCCCTaGCAAACCACAGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALIGPVP*QTTVLE
Trigger: CTCCAGCACTGTGGTTTGCAAGGGGACGGGGCCAAT...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CTAGCGCAGCTGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGAGGTCACCAAGAAGCTaGCTATCTTCAAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LAQLGEGACLPAPRILRLRSPRS*LSSSLL
Trigger: GAGGAGGCTTGAAGATAGCAAGCTTCTTGGTGACCT...CAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCAGCTGCGCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACCGCTCCTCCAGGATATaGTTGATCACCTGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHRSSRI*LITCSG
Trigger: CCCAGAGCAGGTGATCAACAATATCCTGGAGGAGCG...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR CAA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGATTTCTCTGTCTAGGTaGCGGTCCAGCTGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRISLSR*RSSWLR
Trigger: CCTCAGCCAGCTGGACCGCAACCTAGACAGAGAAAT...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR CAA 90 bp TGGGACTCCATCCCCATCTCTTTCCCGCTAGCGCAGCTGGGGGAAGGTGCCTGCGTTCTCCGGTTGTGGTaGGCTCTTGTCGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: WDSIPISFPLAQLGEGACVLRLW*ALVALL
Trigger: CAACAAGGCGACAAGAGCCAACCACAACCGGAGAAC...GCAGGCACCTTCCCCCAGCTGCGCTAGCGGGAAAGAGATGGGGATGGAGTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGATGGGATCATGCCTTaGCTCCTCTTGCGGTCGGCC +
Preference number: 5 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWDGIMP*LLLRSA
Trigger: GGCCGACCGCAAGAGGAGCAAAGGCATGATCCCATC...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS TCA 90 bp GCGCTGGTGAAGTCCTCAGCTTTCCTGTCTTCGGGTCCTTGTGGGTaGTCTGGAGTTGGTCCAGGGGCAGAGCTGGCATTGTGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: ALVKSSAFLSSGPCG*SGVGPGAELALCCV
Trigger: CACGCAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGACTTCACCAGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000412689.5
ENST00000431535.5
ENST00000449900.6
ENST00000454854.5
ENST00000458594.5
ENST00000460313.1
ENST00000462454.1
ENST00000465667.6
ENST00000542393.5
CDS CCA 90 bp GTCCTCAGCTTTCCTGTCTTCGGGTCCTTGTGGGTGATCTGGAGTTaGTCCAGGGGCAGAGCTGGCATTGTGCTGCGTGACCCTCCTCAC +
Preference number: 5 (lower is better)
Translates to: VLSFPVFGSLWVIWS*SRGRAGIVLRDPPH
Trigger: GTGAGGAGGGTCACGCAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431535.5
ENST00000449900.6
ENST00000465667.6
CDS CCA 90 bp TTGACACCTGTTCCAGCTCTAGGATCCCAGCAGATCAGACACACATaGTCTCTGCATACACGAGGTGGCCTCGGCGGCTCCACCACCGGC +
Preference number: 5 (lower is better)
Translates to: LTPVPALGSQQIRHT*SLHTRGGLGGSTTG
Trigger: GCCGGTGGTGGAGCCGCCGAGGCCACCTCGTGTATGCAGAGACCATGTGTGTCTGATCTGCTGGGATCCTAGAGCTGGAACAGGTGTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460313.1
ENST00000492821.1
ENST00000495681.5
CDS-3UTR CAA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTAGCCAGTCGAGGTCATaGGCTACGAAGGTGGCGCGT +
Preference number: 5 (lower is better)
Translates to: SCGPRFGALALGLHPHLFSQSRS*ATKVAR
Trigger: ACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCT...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CAA 90 bp GTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCATTGGCCCCGTCCCCTaGCAAACCACAGTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VCLLLGVASFQTVEPVGTIGPVP*QTTVLE
Trigger: CTCCAGCACTGTGGTTTGCAAGGGGACGGGGCCAAT...GGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAGGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CAA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCCGCTCCTCCAGGATATaGTTGATCACCTGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: WCLVARGLGRLPWDSIPIRSSRI*LITCSG
Trigger: CCCAGAGCAGGTGATCAACAATATCCTGGAGGAGCG...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000542393.5
CDS-3UTR CAA 90 bp TGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCATTCTGGAAGACGTaGTGGCGAGACGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WCLVARGLGRLPWDSIPISFWKT*WRDVSR
Trigger: CCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGA...GATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCTCATTCTGGAAGACGTaGTGGCGAGACGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GKWCLVARGLGRLPWDSISFWKT*WRDVSR
Trigger: CCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGA...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGTTGGCGCCCACCTGGTaGCCATCGTATGTGTCATCG +
Preference number: 5 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRLAPTW*PSYVSS
Trigger: CGATGACACATACGATGGCAACCAGGTGGGCGCCAA...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTTTGGCGCCCACCTGGTaGCCATCGTATGTGTCATCG +
Preference number: 5 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALLAPTW*PSYVSS
Trigger: CGATGACACATACGATGGCAACCAGGTGGGCGCCAA...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTTCAGAGTCTGCATCATaGGCGCCCACCTGGTTGCCA +
Preference number: 5 (lower is better)
Translates to: ACLPAPRILRLWHKALCVSESAS*APTWLP
Trigger: TGGCAACCAGGTGGGCGCCAATGATGCAGACTCTGA...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGTGCCGGTACCCTTTCTaGGCGAGAAAGGCCATGCGC +
Preference number: 5 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWCRYPF*ARKAMR
Trigger: GCGCATGGCCTTTCTCGCCAAGAAAGGGTACCGGCA...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCGCTCTTGTCGCCTTGTaGGCTTCCTTCTTCCTGCGT +
Preference number: 5 (lower is better)
Translates to: GKWCLVARGLGRLPWDSIALVAL*ASFFLR
Trigger: ACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGC...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCGCTCTTGTCGCCTTGTaGGCTTCCTTCTTCCTGCGT +
Preference number: 5 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSALVAL*ASFFLR
Trigger: ACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGC...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TGGGGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGTTGGCTCTTGTCGCCTaGTTGGCTTCCTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: WGKVPACRPHGFFGCGIRLALVA*LASFFL
Trigger: CAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAA...CCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp AAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCGGTTGTGGTTGGCTCTaGTCGCCTTGTTGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: KGKWCLVARGLGRLPWDSGCGWL*SPCWLP
Trigger: AGGAAGCCAACAAGGCGACAAGAGCCAACCACAACC...GGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGATGCCTTTGCTCCTCTaGCGGTCGGCCATGGTTCTC +
Preference number: 5 (lower is better)
Translates to: CRPHGFFGCGIRHCVFCRMPLLL*RSAMVL
Trigger: GAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCAT...CCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGGATGGGATCATGCCTTaGCTCCTCTTGCGGTCGGCC +
Preference number: 5 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWDGIMP*LLLRSA
Trigger: GGCCGACCGCAAGAGGAGCAAAGGCATGATCCCATC...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp AGAGCCTGTGGGTACCACAAGGATTCTTCAAGGCCACCTCTCATGTGGGTCTGCGGGGAAGGTGCCTGCTaGCCGGCCCCACGGATTCTT +
Preference number: 5 (lower is better)
Translates to: RACGYHKDSSRPPLMWVCGEGAC*PAPRIL
Trigger: AAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCCC...GCAGACCCACATGAGAGGTGGCCTTGAAGAATCCTTGTGGTACCCACAGGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CAA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGTTTGGGGCGCTTGCCTaGGGACTCCATCCCCATCTC +
Preference number: 5 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWFGALA*GLHPHL
Trigger: GAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAA...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS TCA 90 bp TCACCTGCTCTGGGTCGTAGTGGTAGTACTCCAGGCAGGCCAGGATaGAGCCCTCACCAAGGTCTGGCAGCAGGTCCTTCACTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: SPALGRSGSTPGRPG*SPHQGLAAGPSLGR
Trigger: TCTCCCAAGTGAAGGACCTGCTGCCAGACCTTGGTGAGGGCTTCATCCTGGCCTGCCTGGAGTACTACCACTACGACCCAGAGCAGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000487486.5
ENST00000542393.5
CDS CCA 90 bp GGTGAAGTCCTCAGCTTTCCTGTCTTCGGGTCCTTGTGGGTGATCTaGAGTTGGTCCAGGGGCAGAGCTGGCATTGTGCTGCGTGACCCT +
Preference number: 5 (lower is better)
Translates to: GEVLSFPVFGSLWVI*SWSRGRAGIVLRDP
Trigger: AGGGTCACGCAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGACTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000412689.5
ENST00000431535.5
ENST00000449900.6
ENST00000454854.5
ENST00000458594.5
ENST00000460313.1
ENST00000462454.1
ENST00000465667.6
ENST00000542393.5
CDS CCA 90 bp TGCAGCGCTGGTGAAGTCCTCAGCTTTCCTGTCTTCGGGTCCTTGTaGGTGATCTGGAGTTGGTCCAGGGGCAGAGCTGGCATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: CSAGEVLSFPVFGSL*VIWSWSRGRAGIVL
Trigger: CAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGACTTCACCAGCGCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000412689.5
ENST00000431535.5
ENST00000460313.1
ENST00000465667.6
CDS CCA 90 bp GTCCTCAGCTTTCCTGTCTTCGGGTCCTTGTGGGTGATCTGGAGTTaGTCCAGGGGCAGAGCTGGCATTGTGCTGCGTGACCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: VLSFPVFGSLWVIWS*SRGRAGIVLRDPPV
Trigger: AACAGGAGGGTCACGCAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397771.6
ENST00000458594.5
CDS CCA 90 bp GTCCTCAGCTTTCCTGTCTTCGGGTCCTTGTGGGTGATCTGGAGTTaGTCCAGGGGCAGAGCTGGCATTGTGCTGCGTGACCCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: VLSFPVFGSLWVIWS*SRGRAGIVLRDPPE
Trigger: TTCAGGAGGGTCACGCAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000462454.1
CDS CCA 90 bp TCCAGCGCTGGTGAAGTCCTCAGCTTTCCTGTCTTCGGGTCCTTGTaGGTGATCTGGAGTTGGTCCAGGGGCAGAGCTGGCATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: SSAGEVLSFPVFGSL*VIWSWSRGRAGIVL
Trigger: CAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGACTTCACCAGCGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449900.6
CDS CCA 90 bp AGACAGAGGAGAGCGAGGATTTATCCCTTAGGCCCCAGGGGCTTGTaGGTGGACTGTGCAGGGACTCAATGCCCATCAGCCCTGCCCTAT +
Preference number: 5 (lower is better)
Translates to: RQRRARIYPLGPRGL*VDCAGTQCPSALPY
Trigger: ATAGGGCAGGGCTGATGGGCATTGAGTCCCTGCACAGTCCACCCACAAGCCCCTGGGGCCTAAGGGATAAATCCTCGCTCTCCTCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463203.1
CDS CCA 90 bp ACCAGCGCTGGTGAAGTCCTCAGCTTTCCTGTCTTCGGGTCCTTGTaGGTGATCTGGAGTTGGTCCAGGGGCAGAGCTGGCATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: TSAGEVLSFPVFGSL*VIWSWSRGRAGIVL
Trigger: CAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGACTTCACCAGCGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462454.1
ENST00000542393.5
CDS-3UTR CAA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGTGGGTGATCTGGAGTaGGTCCAGGGGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFVGDLE*VQGQSW
Trigger: CCAGCTCTGCCCCTGGACCAACTCCAGATCACCCAC...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACAGGTCACCAAGAAGCTaGCTATCTTCAAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHRSPRS*LSSSLL
Trigger: GAGGAGGCTTGAAGATAGCAAGCTTCTTGGTGACCT...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp AGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGTCATTCTGGAAGACGTaGTGGCGAGACGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RVKGKWCLVARGLGRLPWSFWKT*WRDVSR
Trigger: CCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGA...CCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCATTCTGGAAGACGTaGTGGCGAGACGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDSFWKT*WRDVSR
Trigger: CCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGA...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACGCTCTTGTCGCCTTGTaGGCTTCCTTCTTCCTGCGT +
Preference number: 5 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDALVAL*ASFFLR
Trigger: ACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGC...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCTTGGCTCTTGTCGCCTaGTTGGCTTCCTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: GKWCLVARGLGRLPWDSILALVA*LASFFL
Trigger: CAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAA...GATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTGGTTGTGGTTGGCTCTaGTCGCCTTGTTGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: ACLPAPRILRLWHKALCVGCGWL*SPCWLP
Trigger: AGGAAGCCAACAAGGCGACAAGAGCCAACCACAACC...AACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS CCA 90 bp GTGGTAGTACTCCAGGCAGGCCAGGATGAAGCCCTCACCAAGGTCTaGCAGCAGGTCCTTCACTTGGGAGATGAGAGAGTCCAGTTCCAC +
Preference number: 5 (lower is better)
Translates to: VVVLQAGQDEALTKV*QQVLHLGDERVQFH
Trigger: GTGGAACTGGACTCTCTCATCTCCCAAGTGAAGGACCTGCTGCCAGACCTTGGTGAGGGCTTCATCCTGGCCTGCCTGGAGTACTACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000487486.5
ENST00000542393.5
CDS CCA 90 bp ATCAGCGCTGGTGAAGTCCTCAGCTTTCCTGTCTTCGGGTCCTTGTaGGTGATCTGGAGTTGGTCCAGGGGCAGAGCTGGCATTGTGCTG +
Preference number: 5 (lower is better)
Translates to: ISAGEVLSFPVFGSL*VIWSWSRGRAGIVL
Trigger: CAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGACTTCACCAGCGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS CCA 90 bp AGTCCCTGGGCACTGTCAAAGCGCTGGCCTTTGCAACCTTTAGTTTaGCATGTGGGGGCCATCTTGGTGCATCCTCCCAGTCCTGCATCC +
Preference number: 5 (lower is better)
Translates to: SPWALSKRWPLQPLV*HVGAILVHPPSPAS
Trigger: GGATGCAGGACTGGGAGGATGCACCAAGATGGCCCCCACATGCCAAACTAAAGGTTGCAAAGGCCAGCGCTTTGACAGTGCCCAGGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS-3UTR CAA 90 bp GGTAGGAGTCCAGGCACTTCTGTAGAGTCTCGTCAAAGATCACCTGGCACCAGAGTGGGTGATCTGGAGTaGGTCCAGGGGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: GRSPGTSVESRQRSPGTRVGDLE*VQGQSW
Trigger: CCAGCTCTGCCCCTGGACCAACTCCAGATCACCCAC...TCTGGTGCCAGGTGATCTTTGACGAGACTCTACAGAAGTGCCTGGACTCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CAA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTACTAGGGCGGGAATGTaGTCTTTAGGGGGCGGTTTG +
Preference number: 5 (lower is better)
Translates to: SCGPRFGALALGLHPHLFTRAGM*SLGGGL
Trigger: CAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGT...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CAA 90 bp GGGAAGGTGCCTGCTTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACACTCCATTTCGGGAATaGCTGCTTCGTAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: GKVPACRPHGFFGCGIRHTPFRE*LLRRRK
Trigger: CTTCCTTCTACGAAGCAGCAATTCCCGAAATGGAGT...GTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAAGCAGGCACCTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGTCAGAGTCTGCATCATaGGCGCCCACCTGGTTGCCA +
Preference number: 5 (lower is better)
Translates to: LLLGVASFQTVEPVGTTRSESAS*APTWLP
Trigger: TGGCAACCAGGTGGGCGCCAATGATGCAGACTCTGA...CCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CAA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGTGCCGGTACCCTTTCTaGGCGAGAAAGGCCATGCGC +
Preference number: 5 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMCRYPF*ARKAMR
Trigger: GCGCATGGCCTTTCTCGCCAAGAAAGGGTACCGGCA...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp CACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGAGTCCTGCGTTCCTGGGTaGTCTCGCGGCTCTGCCCAT +
Preference number: 5 (lower is better)
Translates to: HKIPVCLLLGVASFQTVESCVPG*SRGSAH
Trigger: ATGGGCAGAGCCGCGAGACAACCCAGGAACGCAGGA...CTCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CAA 90 bp CCACGGGGAAGAGTGCATCATAGTCCCGGAGGAACCTCTTCTCCTGCAGCAAGGGCTCTTGTCGCCTTGTaGGCTTCCTTCTTCCTGCGT +
Preference number: 5 (lower is better)
Translates to: PRGRVHHSPGGTSSPAARALVAL*ASFFLR
Trigger: ACGCAGGAAGAAGGAAGCCAACAAGGCGACAAGAGC...CCTTGCTGCAGGAGAAGAGGTTCCTCCGGGACTATGATGCACTCTTCCCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS CCA 90 bp GCCTTCTGCTCGGGGTGCTACGGATCCAAAAACCACGTGTTAACGTaGCAGAGGTTAGTCAGCGAGGGCCCATTTGCCAACCCACAGCAA +
Preference number: 5 (lower is better)
Translates to: AFCSGCYGSKNHVLT*QRLVSEGPFANPQQ
Trigger: TTGCTGTGGGTTGGCAAATGGGCCCTCGCTGACTAACCTCTGCCACGTTAACACGTGGTTTTTGGATCCGTAGCACCCCGAGCAGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477074.1
CDS-3UTR CAA 90 bp GTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGATTCTTCAAGGCGTGGGTGATCTGGAGTaGGTCCAGGGGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: VASFQTVEPVGTTRILQGVGDLE*VQGQSW
Trigger: CCAGCTCTGCCCCTGGACCAACTCCAGATCACCCAC...GCCTTGAAGAATCCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACTCGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS-3UTR CAA 90 bp GAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCTCAGGGGCTGAGGAGCCAGTCGAGGTCATaGGCTACGAAGGTGGCGCGT +
Preference number: 5 (lower is better)
Translates to: EKHFDGGASACQQPQGLRSQSRS*ATKVAR
Trigger: ACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCT...CCTCAGCCCCTGAGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR CAA 90 bp CTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGGCTGGTGGAGCAGTGGTGAGTaGCCTTTTCCAAAGAGCACG +
Preference number: 5 (lower is better)
Translates to: LRLWHKALCVLQEGAHGWWSSGE*PFPKST
Trigger: CGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCA...CCAGCCATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTAGGTCACCAAGAAGCTaGCTATCTTCAAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: AVQGKGEVVSCGPRFGALRSPRS*LSSSLL
Trigger: GAGGAGGCTTGAAGATAGCAAGCTTCTTGGTGACCT...AAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACAGGTCACCAAGAAGCTaGCTATCTTCAAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDRSPRS*LSSSLL
Trigger: GAGGAGGCTTGAAGATAGCAAGCTTCTTGGTGACCT...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp GGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGGAAGGCGCTCATGTCAGAGTCTGCATCATaGGCGCCCACCTGGTTGCCA +
Preference number: 5 (lower is better)
Translates to: GFFGCGIRHCVFCRKALMSESAS*APTWLP
Trigger: TGGCAACCAGGTGGGCGCCAATGATGCAGACTCTGA...CATGAGCGCCTTCCTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGTTGGCTCTTGTCGCCTaGTTGGCTTCCTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: LPAPRILRLWHKALCVLQLALVA*LASFFL
Trigger: CAGGAAGAAGGAAGCCAACAAGGCGACAAGAGCCAA...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTATGCCTTTGCTCCTCTaGCGGTCGGCCATGGTTCTC +
Preference number: 5 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFMPLLL*RSAMVL
Trigger: GAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCAT...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS TCA 90 bp TGGCAGAGGTTAGTCAGCGAGGGCCCATTTGCCAACCCACAGCAATaGCAACACTTGGCTGTTCCAACCGGTGACCCTCCAAGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: WQRLVSEGPFANPQQ*QHLAVPTGDPPRSF
Trigger: AAAGCTCCTTGGAGGGTCACCGGTTGGAACAGCCAAGTGTTGTCATTGCTGTGGGTTGGCAAATGGGCCCTCGCTGACTAACCTCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477074.1
CDS-3UTR CAA 90 bp TGTAGAGCCTGTGGGTACCACAAGGATTCTTCAAGGCCACCTCTCATGTGGGTCCCTGTCTTCGGGTCCTaGTGGGTGATCTGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: CRACGYHKDSSRPPLMWVPVFGS*WVIWSW
Trigger: CCAACTCCAGATCACCCACAAGGACCCGAAGACAGG...GACCCACATGAGAGGTGGCCTTGAAGAATCCTTGTGGTACCCACAGGCTCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS-3UTR CAA 90 bp ATAACACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTCTGGTGCTCTTGCCCTaGTGCACCCGGCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ITQNTGLPSARGGEFPNCLVLLP*CTRLRS
Trigger: AGACCTGAGCCGGGTGCACAAGGGCAAGAGCACCAG...ACAGTTTGGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CAA 90 bp AGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGATTCTTCAAGGCCACCTCGCCGCCACTGCACGCTaGTCGTTCAGCAAACTCCGC +
Preference number: 5 (lower is better)
Translates to: SFQTVEPVGTTRILQGHLAATAR*SFSKLR
Trigger: GCGGAGTTTGCTGAACGACAAGCGTGCAGTGGCGGC...GAGGTGGCCTTGAAGAATCCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CAA 90 bp GCTCGGGGTGGCGAGTTTCCAAACTGTAGAGCCTGTGGGTACCACAAGGATTCTGGTTGTGGTTGGCTCTaGTCGCCTTGTTGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: ARGGEFPNCRACGYHKDSGCGWL*SPCWLP
Trigger: AGGAAGCCAACAAGGCGACAAGAGCCAACCACAACC...AGAATCCTTGTGGTACCCACAGGCTCTACAGTTTGGAAACTCGCCACCCCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS GCA 90 bp GGCCACTGCTCTTCTCTTCTTTCTCCTCATTCTCCTCCTCCTCCATaGAGCATTCCAGGCCCATCTCCTCCCATGCACTTCCTGATCATG +
Preference number: 5 (lower is better)
Translates to: GHCSSLLSPHSPPPP*SIPGPSPPMHFLIM
Trigger: CATGATCAGGAAGTGCATGGGAGGAGATGGGCCTGGAATGCTGCATGGAGGAGGAGGAGAATGAGGAGAAAGAAGAGAAGAGCAGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464287.1
CDS-3UTR CAA 90 bp ACACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCAAACTGTAGACCTGTCTTCGGGTCCTaGTGGGTGATCTGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: TQNTGLPSARGGEFPNCRPVFGS*WVIWSW
Trigger: CCAACTCCAGATCACCCACAAGGACCCGAAGACAGG...TCTACAGTTTGGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS-3UTR CAA 90 bp GTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCTTTAGGGGGCGGTTaGTATAACACAAAATACCGG +
Preference number: 5 (lower is better)
Translates to: VKGKWCLVARGLGRLPWDSLGGG*YNTKYR
Trigger: CCGGTATTTTGTGTTATACAAACCGCCCCCTAAAGA...GTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGACACCACTTCCCCTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
CDS-3UTR CAA 90 bp GGTAGGAGTCCAGGCACTTCTGTAGAGTCTCGTCAAAGATCACCTGGCACCAGAACTAGGGCGGGAATGTaGTCTTTAGGGGGCGGTTTG +
Preference number: 5 (lower is better)
Translates to: GRSPGTSVESRQRSPGTRTRAGM*SLGGGL
Trigger: CAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGT...TCTGGTGCCAGGTGATCTTTGACGAGACTCTACAGAAGTGCCTGGACTCCTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR CAA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTTGGAGCAGTGGTGAGTaGCCTTTTCCAAAGAGCACG +
Preference number: 5 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFWSSGE*PFPKST
Trigger: CGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCA...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TTGCCGGCCCCACGGATTCTTCGGCTGTGGCATAAGGCACTGTGTGTTCTGCAGACTCCATTTCGGGAATaGCTGCTTCGTAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: LPAPRILRLWHKALCVLQTPFRE*LLRRRK
Trigger: CTTCCTTCTACGAAGCAGCAATTCCCGAAATGGAGT...CTGCAGAACACACAGTGCCTTATGCCACAGCCGAAGAATCCGTGGGGCCGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp TCTTGTGGCCCGAGGTTTGGGGCGCTTGCCTTGGGACTCCATCCCCATCTCTTTACTCCATTTCGGGAATaGCTGCTTCGTAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: SCGPRFGALALGLHPHLFTPFRE*LLRRRK
Trigger: CTTCCTTCTACGAAGCAGCAATTCCCGAAATGGAGT...AAAGAGATGGGGATGGAGTCCCAAGGCAAGCGCCCCAAACCTCGGGCCACAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS-3UTR CAA 90 bp ATCGTATGTGTCATCGTACTCATCCTCGTAGTAGACACTGTGGTAGGGCAGGCTTGCCGGTACCCTTTCTaGGCGAGAAAGGCCATGCGC +
Preference number: 5 (lower is better)
Translates to: IVCVIVLILVVDTVVGQACRYPF*ARKAMR
Trigger: GCGCATGGCCTTTCTCGCCAAGAAAGGGTACCGGCA...AGCCTGCCCTACCACAGTGTCTACTACGAGGATGAGTACGATGACACATACGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CAA 90 bp GGTAGGAGTCCAGGCACTTCTGTAGAGTCTCGTCAAAGATCACCTGGCACCAGAGTTCTCCGGTTGTGGTaGGCTCTTGTCGCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GRSPGTSVESRQRSPGTRVLRLW*ALVALL
Trigger: CAACAAGGCGACAAGAGCCAACCACAACCGGAGAAC...TCTGGTGCCAGGTGATCTTTGACGAGACTCTACAGAAGTGCCTGGACTCCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS-3UTR CAA 90 bp GTGCTTCTGGAAGGTCTGGCAAGCCAAAGGGAAGATATCCAGAAAGGCCCAAAGATGCCTTTGCTCCTCTaGCGGTCGGCCATGGTTCTC +
Preference number: 5 (lower is better)
Translates to: VLLEGLASQREDIQKGPKMPLLL*RSAMVL
Trigger: GAGAACCATGGCCGACCGCAAGAGGAGCAAAGGCAT...CTTTGGGCCTTTCTGGATATCTTCCCTTTGGCTTGCCAGACCTTCCAGAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458594.5
CDS GCA 90 bp TGCTGCGTGACCCTCCCTAGAAGGAGTAATAAGAGAGGACCAGTCTaGCTAGTCCTTGACACCTGTTCCAGCTCTAGGATCCCAGCAGAT +
Preference number: 5 (lower is better)
Translates to: CCVTLPRRSNKRGPV*LVLDTCSSSRIPAD
Trigger: ATCTGCTGGGATCCTAGAGCTGGAACAGGTGTCAAGGACTAGGCAGACTGGTCCTCTCTTATTACTCCTTCTAGGGAGGGTCACGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460313.1
CDS GCA 90 bp CTTCTGCTCGGGGTGCCTAGAAGGAGTAATAAGAGAGGACCAGTCTaGCTAGTCCTTGACACCTGTTCCAGCTCTAGGATCCCAGCAGAT +
Preference number: 5 (lower is better)
Translates to: LLLGVPRRSNKRGPV*LVLDTCSSSRIPAD
Trigger: ATCTGCTGGGATCCTAGAGCTGGAACAGGTGTCAAGGACTAGGCAGACTGGTCCTCTCTTATTACTCCTTCTAGGCACCCCGAGCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495681.5
CDS CCA 90 bp TTGGTGCATCCTCCCAGTCCTGCATCCTACACACCTATCATCTTCTaGAGCAGTGGTGAGTTGCCTTTTCCAAAGAGCACGCAGAGGTCC +
Preference number: 5 (lower is better)
Translates to: LVHPPSPASYTPIIF*SSGELPFPKSTQRS
Trigger: GGACCTCTGCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGTGTGTAGGATGCAGGACTGGGAGGATGCACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS CCA 90 bp TTAAGCAATTTCCCAAGACTCCCTGCCCCTATCGCCCTGAGTCCCTaGGCACTGTCAAAGCGCTGGCCTTTGCAACCTTTAGTTTGGCAT +
Preference number: 5 (lower is better)
Translates to: LSNFPRLPAPIALSP*ALSKRWPLQPLVWH
Trigger: ATGCCAAACTAAAGGTTGCAAAGGCCAGCGCTTTGACAGTGCCCAGGGACTCAGGGCGATAGGGGCAGGGAGTCTTGGGAAATTGCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS CCA 90 bp CAACCCCTCAACATTCTTCCAGAGATCAGCACTCCCACAGCCCTCTaGCTTCCTCTCAGGCTAATGCTGGCCACTGCTCTTCTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: QPLNILPEISTPTAL*LPLRLMLATALLFF
Trigger: AAAGAAGAGAAGAGCAGTGGCCAGCATTAGCCTGAGAGGAAGCCAGAGGGCTGTGGGAGTGCTGATCTCTGGAAGAATGTTGAGGGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464287.1
CDS-3UTR CAA 90 bp AGCCAGTCGAGGTCATTGGCTACGAAGGTGGCGCGTTCCAGGTACTCCTCCACTTCTTTAGGGGGCGGTTaGTATAACACAAAATACCGG +
Preference number: 5 (lower is better)
Translates to: SQSRSLATKVARSRYSSTSLGGG*YNTKYR
Trigger: CCGGTATTTTGTGTTATACAAACCGCCCCCTAAAGA...AGTGGAGGAGTACCTGGAACGCGCCACCTTCGTAGCCAATGACCTCGACTGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR CAA 90 bp GGACATAGCGCAGGTAGGAGTCCAGGCACTTCTGTAGAGTCTCGTCAAAGATCAACTAGGGCGGGAATGTaGTCTTTAGGGGGCGGTTTG +
Preference number: 5 (lower is better)
Translates to: GHSAGRSPGTSVESRQRSTRAGM*SLGGGL
Trigger: CAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGT...TGATCTTTGACGAGACTCTACAGAAGTGCCTGGACTCCTACCTGCGCTATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453160.5
ENST00000458594.5
CDS-3UTR CAA 90 bp GGCACCAGAATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCATTGGCTACCAAGGTCTCCTGTCTaGCTGTCCAGTGTTCTTTTC +
Preference number: 5 (lower is better)
Translates to: GTRIYREARPGASRGHWLPRSPV*LSSVLF
Trigger: GAAAAGAACACTGGACAGCAAGACAGGAGACCTTGG...TAGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAATTCTGGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453160.5
CDS TCA 90 bp TCCCAGTCCTGCATCCTACACACCTATCATCTTCTGGAGCAGTGGTaGGTTGCCTTTTCCAAAGAGCACGCAGAGGTCCAGGATCTTTGG +
Preference number: 5 (lower is better)
Translates to: SQSCILHTYHLLEQW*VAFSKEHAEVQDLW
Trigger: CCAAAGATCCTGGACCTCTGCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGTGTGTAGGATGCAGGACTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS GCA 90 bp GGGGTGCTCACAGTCAGTGAGTGGCAGATCCAAGGTCTCCTGTCTTaGTGTCCAGTGTTCTTTTCACAATATCACTTGGCCTGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: GVLTVSEWQIQGLLS*CPVFFSQYHLACSS
Trigger: GCTGGAACAGGCCAAGTGATATTGTGAAAAGAACACTGGACAGCAAGACAGGAGACCTTGGATCTGCCACTCACTGACTGTGAGCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453160.5
CDS CCA 90 bp GAGTCCCTGCTGAACACATCAAACTCGTCATTCTGGAAGACGTTGTaGCGAGACGTCAGCAGGGGTGTAGGGTCTGGTTTCATTTCTCTG +
Preference number: 5 (lower is better)
Translates to: ESLLNTSNSSFWKTL*RDVSRGVGSGFISL
Trigger: CAGAGAAATGAAACCAGACCCTACACCCCTGCTGACGTCTCGCCACAACGTCTTCCAGAATGACGAGTTTGATGTGTTCAGCAGGGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000411532.1
ENST00000487486.5
ENST00000542393.5
CDS-3UTR CAA 90 bp AGGTTTCCTGCTGTCCAGGGTAAAGGGGAAGTGGTGTCTTGTGGCCCGAGGTTTACTCCATTTCGGGAATaGCTGCTTCGTAGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: RFPAVQGKGEVVSCGPRFTPFRE*LLRRRK
Trigger: CTTCCTTCTACGAAGCAGCAATTCCCGAAATGGAGT...AAACCTCGGGCCACAAGACACCACTTCCCCTTTACCCTGGACAGCAGGAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000458594.5
ENST00000542393.5
CDS GCA 90 bp TGTGAAGATCCCCACCCTAGAAGGAGTAATAAGAGAGGACCAGTCTaGCTAGTCCTTGACACCTGTTCCAGCTCTAGGATCCCAGCAGAT +
Preference number: 5 (lower is better)
Translates to: CEDPHPRRSNKRGPV*LVLDTCSSSRIPAD
Trigger: ATCTGCTGGGATCCTAGAGCTGGAACAGGTGTCAAGGACTAGGCAGACTGGTCCTCTCTTATTACTCCTTCTAGGGTGGGGATCTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492821.1
CDS CCA 90 bp CTGAAGGATGGTAGGCAGGGTTTCATCCAGGTCACTGTAGTAACTTaGCTGCTGTGTAAAGATGTTTCCAGCGCTGGTGAAGTCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LKDGRQGFIQVTVVT*LLCKDVSSAGEVLS
Trigger: GCTGAGGACTTCACCAGCGCTGGAAACATCTTTACACAGCAGCCAAGTTACTACAGTGACCTGGATGAAACCCTGCCTACCATCCTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449900.6
CDS CCA 90 bp AGGCAAGGAGGTGGAAACAGCCTGGTACCCAAGGAACCTTGGTTCTaGCCTGTTATAAAGACTGTGAAGATCCCCACCCTAGAAGGAGTA +
Preference number: 5 (lower is better)
Translates to: RQGGGNSLVPKEPWF*PVIKTVKIPTLEGV
Trigger: TACTCCTTCTAGGGTGGGGATCTTCACAGTCTTTATAACAGGCCAGAACCAAGGTTCCTTGGGTACCAGGCTGTTTCCACCTCCTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492821.1
CDS CCA 90 bp GAGCAAAGGCAAGGAGGTGGAAACAGCCTGGTACCCAAGGAACCTTaGTTCTGGCCTGTTATAAAGACTGTGAAGATCCCCACCCTAGAA +
Preference number: 5 (lower is better)
Translates to: EQRQGGGNSLVPKEP*FWPVIKTVKIPTLE
Trigger: TTCTAGGGTGGGGATCTTCACAGTCTTTATAACAGGCCAGAACCAAGGTTCCTTGGGTACCAGGCTGTTTCCACCTCCTTGCCTTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492821.1
CDS-3UTR CAA 90 bp ATTTATCGTGAGGCAAGGCCAGGAGCCAGTCGAGGTCATTGGCTACGAAGGTGGTTTTCACAATATCACTaGGCCTGTTCCAGCTCTAGG +
Preference number: 5 (lower is better)
Translates to: IYREARPGASRGHWLRRWFSQYH*ACSSSR
Trigger: CCTAGAGCTGGAACAGGCCAAGTGATATTGTGAAAA...CCACCTTCGTAGCCAATGACCTCGACTGGCTCCTGGCCTTGCCTCACGATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453160.5
CDS TCA 90 bp CATGGCTGCTTTCTAGGATGGGAAGGAGGCAGATCTGGTTCAGGATaGTGTGGAAAATCTCCATTAGCTTCTTCCTGGAATGGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: HGCFLGWEGGRSGSG*CGKSPLASSWNGRA
Trigger: GGCTCTCCCATTCCAGGAAGAAGCTAATGGAGATTTTCCACATCATCCTGAACCAGATCTGCCTCCTTCCCATCCTAGAAAGCAGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472433.5
CDS TCA 90 bp GGTCCAGGATTTTGGATTCCTTGTGAGTGGACATGCGGAGGAAGGTaGGAAAAACACTTCGATGGAGGCGCTTCTGCATGTCAACAACCT +
Preference number: 5 (lower is better)
Translates to: GPGFWIPCEWTCGGR*EKHFDGGASACQQP
Trigger: AGGTTGTTGACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTCCTCCGCATGTCCACTCACAAGGAATCCAAAATCCTGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542393.5
CDS GCA 90 bp GTCCTGCATCCTACACACCTATCATCTTCTGGAGCAGTGGTGAGTTaGCTTTTCCAAAGAGCACGCAGAGGTCCAGGATCTTTGGAATGT +
Preference number: 5 (lower is better)
Translates to: VLHPTHLSSSGAVVS*LFQRARRGPGSLEC
Trigger: ACATTCCAAAGATCCTGGACCTCTGCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGTGTGTAGGATGCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS-3UTR CAA 90 bp TCCACTAGGGCGGGAATGTTGTCTTTAGGGGGCGGTTTGTATAACACAAAATACACTAGGGCGGGAATGTaGTCTTTAGGGGGCGGTTTG +
Preference number: 5 (lower is better)
Translates to: STRAGMLSLGGGLYNTKYTRAGM*SLGGGL
Trigger: CAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGT...GTATTTTGTGTTATACAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000453160.5
ENST00000454854.5
ENST00000458594.5
CDS CCA 90 bp AGAGCCTGTGGGTACCACAAGGATTCTTCAAGGCCACCTCTCATGTaGGTCTGCAGGACCCCCTCCCATTTAAATCAAATTTGTATCATG +
Preference number: 5 (lower is better)
Translates to: RACGYHKDSSRPPLM*VCRTPSHLNQICIM
Trigger: CATGATACAAATTTGATTTAAATGGGAGGGGGTCCTGCAGACCCACATGAGAGGTGGCCTTGAAGAATCCTTGTGGTACCCACAGGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS-3UTR CAA 90 bp GTTTGTATAACACAAAATACCGGTCTGCCTTCTGCTCGGGGTGGCGAGTTTCCATCTTTAGGGGGCGGTTaGTATAACACAAAATACCGG +
Preference number: 5 (lower is better)
Translates to: VCITQNTGLPSARGGEFPSLGGG*YNTKYR
Trigger: CCGGTATTTTGTGTTATACAAACCGCCCCCTAAAGA...TGGAAACTCGCCACCCCGAGCAGAAGGCAGACCGGTATTTTGTGTTATACAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS GCA 90 bp TGTGGGTACCACAAGGATTCTTCAAGGCCACCTCTCATGTGGGTCTaGAGGACCCCCTCCCATTTAAATCAAATTTGTATCATGGAGTTA +
Preference number: 5 (lower is better)
Translates to: CGYHKDSSRPPLMWV*RTPSHLNQICIMEL
Trigger: TAACTCCATGATACAAATTTGATTTAAATGGGAGGGGGTCCTGCAGACCCACATGAGAGGTGGCCTTGAAGAATCCTTGTGGTACCCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS GCA 90 bp CCTGATCATGCTCACTCATGGGAATTCTTCCTTTCCAGAACTAGATaGACTGCATGTGGAATATATTGCCCTGTTGCCCTGGCAAGTGAA +
Preference number: 5 (lower is better)
Translates to: PDHAHSWEFFLSRTR*TACGIYCPVALASE
Trigger: TTCACTTGCCAGGGCAACAGGGCAATATATTCCACATGCAGTGCATCTAGTTCTGGAAAGGAAGAATTCCCATGAGTGAGCATGATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464287.1
CDS TCA 90 bp ATTTGCCAACCCACAGCAATGACAACACTTGGCTGTTCCAACCGGTaGCCCTCCAAGGAGCTTTTAAGCATAAAGAACCAAGTGTATCTA +
Preference number: 5 (lower is better)
Translates to: ICQPTAMTTLGCSNR*PSKELLSIKNQVYL
Trigger: TAGATACACTTGGTTCTTTATGCTTAAAAGCTCCTTGGAGGGTCACCGGTTGGAACAGCCAAGTGTTGTCATTGCTGTGGGTTGGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477074.1
CDS-3UTR CAA 90 bp TCCACTAGGGCGGGAATGTTGTCTTTAGGGGGCGGTTTGTATAACACAAAATACTCTTTAGGGGGCGGTTaGTATAACACAAAATACCGG +
Preference number: 5 (lower is better)
Translates to: STRAGMLSLGGGLYNTKYSLGGG*YNTKYR
Trigger: CCGGTATTTTGTGTTATACAAACCGCCCCCTAAAGA...GTATTTTGTGTTATACAAACCGCCCCCTAAAGACAACATTCCCGCCCTAGTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000453160.5
ENST00000454854.5
ENST00000458594.5
CDS TCA 90 bp TCCATATCTGTCACGGTATACAGCCAATCTTGCTTCTCACCTAGGTaGTTTCATACCACCCTTTCCCAACTCAAATTCAAACTCTCCATC +
Preference number: 5 (lower is better)
Translates to: SISVTVYSQSCFSPR*FHTTLSQLKFKLSI
Trigger: GATGGAGAGTTTGAATTTGAGTTGGGAAAGGGTGGTATGAAATCACCTAGGTGAGAAGCAAGATTGGCTGTATACCGTGACAGATATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464287.1
CDS CCA 90 bp CTGAAGGATGGTAGGCAGGGTTTCATCCAGGTCACTGTAGTAACTTaGCTGCTGTGTAAAGATGTTTCTTGCAATTGTTCCTATAAGATG +
Preference number: 5 (lower is better)
Translates to: LKDGRQGFIQVTVVT*LLCKDVSCNCSYKM
Trigger: CATCTTATAGGAACAATTGCAAGAAACATCTTTACACAGCAGCCAAGTTACTACAGTGACCTGGATGAAACCCTGCCTACCATCCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478812.5
CDS CCA 90 bp AGAAACTTGCCCAAGGTCTCACAGTTAGTGGGTGGTGAAGCAGGCTaGTTCTTAACTATTCACTATACTGTGTCTAGTTTAGTTAAACTT +
Preference number: 5 (lower is better)
Translates to: RNLPKVSQLVGGEAG*FLTIHYTVSSLVKL
Trigger: AAGTTTAACTAAACTAGACACAGTATAGTGAATAGTTAAGAACCAGCCTGCTTCACCACCCACTAACTGTGAGACCTTGGGCAAGTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492821.1
CDS TCA 72 bp CCGCCGCCGCCGCCGCCGACCACGGTGACAGCTCCCTaGGCGCCCGCACTTCCGGGGTCAAACTGCGATTCC +
Preference number: 6 (lower is better)
Translates to: PPPPPPTTVTAP*APALPGSNCDS
Trigger: GGAATCGCAGTTTGACCCCGGAAGTGCGGGCGCTCAGGGAGCTGTCACCGTGGTCGGCGGCGGCGGCGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460313.1
ENST00000542393.5
CDS CAA 90 bp CAAGGTCTCCTGTCTTGCTGTCCAGTGTTCTTTTCACAATATCACTaGGCCTCGGCGGCTCCACCACCGGCTCTGTGCCGCCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: QGLLSCCPVFFSQYH*ASAAPPPALCRRRR
Trigger: GCGGCGGCGGCGGCACAGAGCCGGTGGTGGAGCCGCCGAGGCCAAGTGATATTGTGAAAAGAACACTGGACAGCAAGACAGGAGACCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS CAA 90 bp GGGTGCAGCGCTGGTGAAGTCCTCAGCTTTCCTGTCTTCGGGTCCTaGTGGGTGATCTGGAGTTGGTCCAGGGGCAGAGCTGGCATTGTG +
Preference number: 6 (lower is better)
Translates to: GCSAGEVLSFPVFGS*WVIWSWSRGRAGIV
Trigger: CACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGACTTCACCAGCGCTGCACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000412689.5
ENST00000431535.5
ENST00000460313.1
ENST00000465667.6
CDS TCA 72 bp GAGTTGGTCCAGGGGCAGAGCTGGCATTGTGCTGCGTaGCCCTCCTCACAGTCAGTGAGTGGCAGATCCAAG +
Preference number: 6 (lower is better)
Translates to: ELVQGQSWHCAA*PSSQSVSGRSK
Trigger: CTTGGATCTGCCACTCACTGACTGTGAGGAGGGTCACGCAGCACAATGCCAGCTCTGCCCCTGGACCAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431535.5
ENST00000449900.6
ENST00000465667.6
CDS GCA 72 bp TCTGGAGTTGGTCCAGGGGCAGAGCTGGCATTGTGCTaGGTGACCCTCCTCACAGTCAGTGAGTGGCAGATC +
Preference number: 6 (lower is better)
Translates to: SGVGPGAELALC*VTLLTVSEWQI
Trigger: GATCTGCCACTCACTGACTGTGAGGAGGGTCACGCAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431535.5
ENST00000449900.6
ENST00000465667.6
CDS CCA 72 bp GGTGAAGTCCTCAGCTTTCCTGTCTTCGGGTCCTTGTaGGTGATCTGGAGTTGGTCCAGGGGCAGAGCTGGC +
Preference number: 6 (lower is better)
Translates to: GEVLSFPVFGSL*VIWSWSRGRAG
Trigger: GCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGACTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000412689.5
ENST00000431535.5
ENST00000449900.6
ENST00000454854.5
ENST00000458594.5
ENST00000460313.1
ENST00000462454.1
ENST00000465667.6
ENST00000542393.5
CDS CCA 72 bp CTCCAGGCAGGCCAGGATGAAGCCCTCACCAAGGTCTaGCAGCAGGTCCTTCACTTGGGAGATGAGAGAGTC +
Preference number: 6 (lower is better)
Translates to: LQAGQDEALTKV*QQVLHLGDERV
Trigger: GACTCTCTCATCTCCCAAGTGAAGGACCTGCTGCCAGACCTTGGTGAGGGCTTCATCCTGGCCTGCCTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000487486.5
ENST00000542393.5
CDS CAA 90 bp GTTTCCAGCGCTGGTGAAGTCCTCAGCTTTCCTGTCTTCGGGTCCTaGTGGGTGATCTGGAGTTGGTCCAGGGGCAGAGCTGGCATTGTG +
Preference number: 6 (lower is better)
Translates to: VSSAGEVLSFPVFGS*WVIWSWSRGRAGIV
Trigger: CACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGACTTCACCAGCGCTGGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449900.6
CDS CAA 90 bp GAGTCCCTGGGCACTGTCAAAGCGCTGGCCTTTGCAACCTTTAGTTaGGCATGTGGGGGCCATCTTGGTGCATCCTCCCAGTCCTGCATC +
Preference number: 6 (lower is better)
Translates to: ESLGTVKALAFATFS*ACGGHLGASSQSCI
Trigger: GATGCAGGACTGGGAGGATGCACCAAGATGGCCCCCACATGCCAAACTAAAGGTTGCAAAGGCCAGCGCTTTGACAGTGCCCAGGGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS CAA 90 bp ATCACCAGCGCTGGTGAAGTCCTCAGCTTTCCTGTCTTCGGGTCCTaGTGGGTGATCTGGAGTTGGTCCAGGGGCAGAGCTGGCATTGTG +
Preference number: 6 (lower is better)
Translates to: ITSAGEVLSFPVFGS*WVIWSWSRGRAGIV
Trigger: CACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGACTTCACCAGCGCTGGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000462454.1
ENST00000542393.5
CDS TCA 72 bp GCTGGCATTGTGCTGCGTGACCCTCCTCACAGTCAGTaGGTGGCAGATCCAAGGTCTCCTGTCTTGCTGTCC +
Preference number: 6 (lower is better)
Translates to: AGIVLRDPPHSQ*VADPRSPVLLS
Trigger: GGACAGCAAGACAGGAGACCTTGGATCTGCCACTCACTGACTGTGAGGAGGGTCACGCAGCACAATGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431535.5
ENST00000449900.6
ENST00000465667.6
CDS CCA 72 bp TTTCCTGTCTTCGGGTCCTTGTGGGTGATCTGGAGTTaGTCCAGGGGCAGAGCTGGCATTGTGCTGCGTGAC +
Preference number: 6 (lower is better)
Translates to: FPVFGSLWVIWS*SRGRAGIVLRD
Trigger: GTCACGCAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000412689.5
ENST00000431535.5
ENST00000449900.6
ENST00000454854.5
ENST00000458594.5
ENST00000460313.1
ENST00000462454.1
ENST00000465667.6
ENST00000542393.5
CDS CCA 72 bp CTCAGCTTTCCTGTCTTCGGGTCCTTGTGGGTGATCTaGAGTTGGTCCAGGGGCAGAGCTGGCATTGTGCTG +
Preference number: 6 (lower is better)
Translates to: LSFPVFGSLWVI*SWSRGRAGIVL
Trigger: CAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000412689.5
ENST00000431535.5
ENST00000449900.6
ENST00000454854.5
ENST00000458594.5
ENST00000460313.1
ENST00000462454.1
ENST00000465667.6
ENST00000542393.5
CDS CCA 72 bp TTCCCAAGACTCCCTGCCCCTATCGCCCTGAGTCCCTaGGCACTGTCAAAGCGCTGGCCTTTGCAACCTTTA +
Preference number: 6 (lower is better)
Translates to: FPRLPAPIALSP*ALSKRWPLQPL
Trigger: TAAAGGTTGCAAAGGCCAGCGCTTTGACAGTGCCCAGGGACTCAGGGCGATAGGGGCAGGGAGTCTTGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS CAA 72 bp GCTGGTGAAGTCCTCAGCTTTCCTGTCTTCGGGTCCTaGTGGGTGATCTGGAGTTGGTCCAGGGGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: AGEVLSFPVFGS*WVIWSWSRGRA
Trigger: AGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGACTTCACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000412689.5
ENST00000431535.5
ENST00000449900.6
ENST00000454854.5
ENST00000458594.5
ENST00000460313.1
ENST00000462454.1
ENST00000465667.6
ENST00000542393.5
CDS CAA 90 bp CAAATCAGCGCTGGTGAAGTCCTCAGCTTTCCTGTCTTCGGGTCCTaGTGGGTGATCTGGAGTTGGTCCAGGGGCAGAGCTGGCATTGTG +
Preference number: 6 (lower is better)
Translates to: QISAGEVLSFPVFGS*WVIWSWSRGRAGIV
Trigger: CACAATGCCAGCTCTGCCCCTGGACCAACTCCAGATCACCCACAAGGACCCGAAGACAGGAAAGCTGAGGACTTCACCAGCGCTGATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS CCA 72 bp AAGCCCTCACCAAGGTCTGGCAGCAGGTCCTTCACTTaGGAGATGAGAGAGTCCAGTTCCACCCCACACATG +
Preference number: 6 (lower is better)
Translates to: KPSPRSGSRSFT*EMRESSSTPHM
Trigger: CATGTGTGGGGTGGAACTGGACTCTCTCATCTCCCAAGTGAAGGACCTGCTGCCAGACCTTGGTGAGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000487486.5
ENST00000542393.5
CDS CCA 72 bp CAGCCGCTCCTCCAGGATATTGTTGATCACCTGCTCTaGGTCGTAGTGGTAGTACTCCAGGCAGGCCAGGAT +
Preference number: 6 (lower is better)
Translates to: QPLLQDIVDHLL*VVVVVLQAGQD
Trigger: ATCCTGGCCTGCCTGGAGTACTACCACTACGACCCAGAGCAGGTGATCAACAATATCCTGGAGGAGCGGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307790.8
ENST00000397771.6
ENST00000487486.5
ENST00000542393.5
CDS CCA 72 bp GCATTGTGCTGCGTGACCCTCCTCACAGTCAGTGAGTaGCAGATCCAAGGTCTCCTGTCTTGCTGTCCAGTG +
Preference number: 6 (lower is better)
Translates to: ALCCVTLLTVSE*QIQGLLSCCPV
Trigger: CACTGGACAGCAAGACAGGAGACCTTGGATCTGCCACTCACTGACTGTGAGGAGGGTCACGCAGCACAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000431535.5
ENST00000449900.6
ENST00000465667.6
CDS TCA 72 bp TTAGTCAGCGAGGGCCCATTTGCCAACCCACAGCAATaGCAACACTTGGCTGTTCCAACCGGTGACCCTCCA +
Preference number: 6 (lower is better)
Translates to: LVSEGPFANPQQ*QHLAVPTGDPP
Trigger: TGGAGGGTCACCGGTTGGAACAGCCAAGTGTTGTCATTGCTGTGGGTTGGCAAATGGGCCCTCGCTGACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477074.1
CDS GCA 72 bp TCTGGAGTTGGTCCAGGGGCAGAGCTGGCATTGTGCTaGGTGACCCTCCTGAAAGGAATATGGATGGGAAGA +
Preference number: 6 (lower is better)
Translates to: SGVGPGAELALC*VTLLKGIWMGR
Trigger: TCTTCCCATCCATATTCCTTTCAGGAGGGTCACGCAGCACAATGCCAGCTCTGCCCCTGGACCAACTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000462454.1
CDS GCA 72 bp GGTGTGGTATTGGCCCCGTCCCCTTGCAAACCACAGTaGTGGAGGATATTGCTGAAGACCTGTAATCCCAGC +
Preference number: 6 (lower is better)
Translates to: GVVLAPSPCKPQ*WRILLKTCNPS
Trigger: GCTGGGATTACAGGTCTTCAGCAATATCCTCCAGCACTGTGGTTTGCAAGGGGACGGGGCCAATACCACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478812.5
CDS CCA 72 bp GACGTTGTGGCGAGACGTCAGCAGGGGTGTAGGGTCTaGTTTCATTTCTCTGCTCTGGGTCGTAGTGGTAGT +
Preference number: 6 (lower is better)
Translates to: DVVARRQQGCRV*FHFSALGRSGS
Trigger: ACTACCACTACGACCCAGAGCAGAGAAATGAAACCAGACCCTACACCCCTGCTGACGTCTCGCCACAACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000411532.1
CDS CCA 72 bp TCGGGGTGCTACGGATCCAAAAACCACGTGTTAACGTaGCAGAGGTTAGTCAGCGAGGGCCCATTTGCCAAC +
Preference number: 6 (lower is better)
Translates to: SGCYGSKNHVLT*QRLVSEGPFAN
Trigger: GTTGGCAAATGGGCCCTCGCTGACTAACCTCTGCCACGTTAACACGTGGTTTTTGGATCCGTAGCACCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000477074.1
CDS CCA 72 bp AACATTCTTCCAGAGATCAGCACTCCCACAGCCCTCTaGCTTCCTCTCAGGCTAATGCTGGCCACTGCTCTT +
Preference number: 6 (lower is better)
Translates to: NILPEISTPTAL*LPLRLMLATAL
Trigger: AAGAGCAGTGGCCAGCATTAGCCTGAGAGGAAGCCAGAGGGCTGTGGGAGTGCTGATCTCTGGAAGAATGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464287.1
CDS CCA 72 bp GTGGTATTGGCCCCGTCCCCTTGCAAACCACAGTGCTaGAGGATATTGCTGAAGACCTGTAATCCCAGCTAC +
Preference number: 6 (lower is better)
Translates to: VVLAPSPCKPQC*RILLKTCNPSY
Trigger: GTAGCTGGGATTACAGGTCTTCAGCAATATCCTCCAGCACTGTGGTTTGCAAGGGGACGGGGCCAATACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478812.5
CDS CAA 90 bp AAGCGCTGGCCTTTGCAACCTTTAGTTTGGCATGTGGGGGCCATCTaGGTGCATCCTCCCAGTCCTGCATCCTACACACCTATCATCTTC +
Preference number: 6 (lower is better)
Translates to: KRWPLQPLVWHVGAI*VHPPSPASYTPIIF
Trigger: GAAGATGATAGGTGTGTAGGATGCAGGACTGGGAGGATGCACCAAGATGGCCCCCACATGCCAAACTAAAGGTTGCAAAGGCCAGCGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS GCA 72 bp CCCCACCCTAGAAGGAGTAATAAGAGAGGACCAGTCTaGCTAGTCCTTGACACCTGTTCCAGCTCTAGGATC +
Preference number: 6 (lower is better)
Translates to: PHPRRSNKRGPV*LVLDTCSSSRI
Trigger: GATCCTAGAGCTGGAACAGGTGTCAAGGACTAGGCAGACTGGTCCTCTCTTATTACTCCTTCTAGGGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492821.1
CDS GCA 72 bp GGGGTGCCTAGAAGGAGTAATAAGAGAGGACCAGTCTaGCTAGTCCTTGACACCTGTTCCAGCTCTAGGATC +
Preference number: 6 (lower is better)
Translates to: GVPRRSNKRGPV*LVLDTCSSSRI
Trigger: GATCCTAGAGCTGGAACAGGTGTCAAGGACTAGGCAGACTGGTCCTCTCTTATTACTCCTTCTAGGCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495681.5
CDS CCA 72 bp CTAGAGGAGAGTCTGAGTAGTCTTGATAATAGAGACTaGCCAGGGAAGAAGGGTGCCCCAGGCAGAGGAAAC +
Preference number: 6 (lower is better)
Translates to: LEESLSSLDNRD*PGKKGAPGRGN
Trigger: GTTTCCTCTGCCTGGGGCACCCTTCTTCCCTGGCCAGTCTCTATTATCAAGACTACTCAGACTCTCCTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492821.1
CDS CAA 72 bp AGAGAAGCTTCAACCTCTCGCCTTAGGAGGCTCCTGTaGTGGTTCAGGACCTGGTTCATGCACCTACTAACC +
Preference number: 6 (lower is better)
Translates to: REASTSRLRRLL*WFRTWFMHLLT
Trigger: GGTTAGTAGGTGCATGAACCAGGTCCTGAACCACAACAGGAGCCTCCTAAGGCGAGAGGTTGAAGCTTCTCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462454.1
CDS CAA 90 bp AGAGTCAGAAGAGAAGCTTCAACCTCTCGCCTTAGGAGGCTCCTGTaGTGGTTCAGGACCTGGTTCATGCACCTACTAACCCAGCCAAAG +
Preference number: 6 (lower is better)
Translates to: RVRREASTSRLRRLL*WFRTWFMHLLTQPK
Trigger: CTTTGGCTGGGTTAGTAGGTGCATGAACCAGGTCCTGAACCACAACAGGAGCCTCCTAAGGCGAGAGGTTGAAGCTTCTCTTCTGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462454.1
CDS TCA 72 bp TGCATCCTACACACCTATCATCTTCTGGAGCAGTGGTaGGTTGCCTTTTCCAAAGAGCACGCAGAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: CILHTYHLLEQW*VAFSKEHAEVQ
Trigger: CTGGACCTCTGCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGTGTGTAGGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS GCA 72 bp CCTACACACCTATCATCTTCTGGAGCAGTGGTGAGTTaGCTTTTCCAAAGAGCACGCAGAGGTCCAGGATCT +
Preference number: 6 (lower is better)
Translates to: PTHLSSSGAVVS*LFQRARRGPGS
Trigger: AGATCCTGGACCTCTGCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGTGTGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS GCA 72 bp ACCCTCCCTAGAAGGAGTAATAAGAGAGGACCAGTCTaGCTAGTCCTTGACACCTGTTCCAGCTCTAGGATC +
Preference number: 6 (lower is better)
Translates to: TLPRRSNKRGPV*LVLDTCSSSRI
Trigger: GATCCTAGAGCTGGAACAGGTGTCAAGGACTAGGCAGACTGGTCCTCTCTTATTACTCCTTCTAGGGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460313.1
CDS CCA 72 bp GGTGGAAACAGCCTGGTACCCAAGGAACCTTGGTTCTaGCCTGTTATAAAGACTGTGAAGATCCCCACCCTA +
Preference number: 6 (lower is better)
Translates to: GGNSLVPKEPWF*PVIKTVKIPTL
Trigger: TAGGGTGGGGATCTTCACAGTCTTTATAACAGGCCAGAACCAAGGTTCCTTGGGTACCAGGCTGTTTCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492821.1
CDS CCA 72 bp CAAGGAGGTGGAAACAGCCTGGTACCCAAGGAACCTTaGTTCTGGCCTGTTATAAAGACTGTGAAGATCCCC +
Preference number: 6 (lower is better)
Translates to: QGGGNSLVPKEP*FWPVIKTVKIP
Trigger: GGGGATCTTCACAGTCTTTATAACAGGCCAGAACCAAGGTTCCTTGGGTACCAGGCTGTTTCCACCTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492821.1
CDS CAA 72 bp TCCTACACACCTATCATCTTCTGGAGCAGTGGTGAGTaGCCTTTTCCAAAGAGCACGCAGAGGTCCAGGATC +
Preference number: 6 (lower is better)
Translates to: SYTPIIFWSSGE*PFPKSTQRSRI
Trigger: GATCCTGGACCTCTGCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGTGTGTAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS CAA 72 bp GCAAGGAGGTGGAAACAGCCTGGTACCCAAGGAACCTaGGTTCTGGCCTGTTATAAAGACTGTGAAGATCCC +
Preference number: 6 (lower is better)
Translates to: ARRWKQPGTQGT*VLACYKDCEDP
Trigger: GGGATCTTCACAGTCTTTATAACAGGCCAGAACCAAGGTTCCTTGGGTACCAGGCTGTTTCCACCTCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492821.1
CDS CAA 90 bp AGTCCTGCATCCTACACACCTATCATCTTCTGGAGCAGTGGTGAGTaGCCTTTTCCAAAGAGCACGCAGAGGTCCAGGATCTTTGGAATG +
Preference number: 6 (lower is better)
Translates to: SPASYTPIIFWSSGE*PFPKSTQRSRIFGM
Trigger: CATTCCAAAGATCCTGGACCTCTGCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGTGTGTAGGATGCAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS GCA 72 bp ACTCATATATCTGTTAAGCAATTTCCCAAGACTCCCTaGCCCTATCGCCCTGAGTCCCTGGGCACTGTCAAA +
Preference number: 6 (lower is better)
Translates to: THISVKQFPKTP*PYRPESLGTVK
Trigger: TTTGACAGTGCCCAGGGACTCAGGGCGATAGGGGCAGGGAGTCTTGGGAAATTGCTTAACAGATATATGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465667.6
CDS GCA 72 bp CTTTCCAGAACTAGATGCACTGCATGTGGAATATATTaGCCTGTTGCCCTGGCAAGTGAAACTGCAGCTGCC +
Preference number: 6 (lower is better)
Translates to: LSRTRCTACGIY*PVALASETAAA
Trigger: GGCAGCTGCAGTTTCACTTGCCAGGGCAACAGGGCAATATATTCCACATGCAGTGCATCTAGTTCTGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464287.1
CDS CCA 72 bp GGGTACCACAAGGATTCTTCAAGGCCACCTCTCATGTaGGTCTGCAGGACCCCCTCCCATTTAAATCAAATT +
Preference number: 6 (lower is better)
Translates to: GYHKDSSRPPLM*VCRTPSHLNQI
Trigger: AATTTGATTTAAATGGGAGGGGGTCCTGCAGACCCACATGAGAGGTGGCCTTGAAGAATCCTTGTGGTACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS CCA 72 bp GGTAGGCAGGGTTTCATCCAGGTCACTGTAGTAACTTaGCTGCTGTGTAAAGATGTTTCCAGCGCTGGTGAA +
Preference number: 6 (lower is better)
Translates to: GRQGFIQVTVVT*LLCKDVSSAGE
Trigger: TTCACCAGCGCTGGAAACATCTTTACACAGCAGCCAAGTTACTACAGTGACCTGGATGAAACCCTGCCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449900.6
CDS CAA 90 bp CAAGGTCTCCTGTCTTGCTGTCCAGTGTTCTTTTCACAATATCACTaGGCCTGTTCCAGCTCTAGGATCCCAGCAGATCAGACACACATG +
Preference number: 6 (lower is better)
Translates to: QGLLSCCPVFFSQYH*ACSSSRIPADQTHM
Trigger: CATGTGTGTCTGATCTGCTGGGATCCTAGAGCTGGAACAGGCCAAGTGATATTGTGAAAAGAACACTGGACAGCAAGACAGGAGACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431535.5
ENST00000449900.6
ENST00000453160.5
CDS TCA 72 bp CCCACAGCAATGACAACACTTGGCTGTTCCAACCGGTaGCCCTCCAAGGAGCTTTTAAGCATAAAGAACCAA +
Preference number: 6 (lower is better)
Translates to: PTAMTTLGCSNR*PSKELLSIKNQ
Trigger: TTGGTTCTTTATGCTTAAAAGCTCCTTGGAGGGTCACCGGTTGGAACAGCCAAGTGTTGTCATTGCTGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477074.1
CDS TCA 72 bp TTTTGGATTCCTTGTGAGTGGACATGCGGAGGAAGGTaGGAAAAACACTTCGATGGAGGCGCTTCTGCATGT +
Preference number: 6 (lower is better)
Translates to: FWIPCEWTCGGR*EKHFDGGASAC
Trigger: ACATGCAGAAGCGCCTCCATCGAAGTGTTTTTCTCACCTTCCTCCGCATGTCCACTCACAAGGAATCCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542393.5
CDS GCA 72 bp GATGGAGTCTTGCTCCATCTCAAACACTGCAACTTCTaGCTCCCAGGTTCAAGTGATTCTCCTATCATCTTC +
Preference number: 6 (lower is better)
Translates to: DGVLLHLKHCNF*LPGSSDSPIIF
Trigger: GAAGATGATAGGAGAATCACTTGAACCTGGGAGGCAGAAGTTGCAGTGTTTGAGATGGAGCAAGACTCCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412689.5
CDS GCA 72 bp CACAAGGATTCTTCAAGGCCACCTCTCATGTGGGTCTaGAGGACCCCCTCCCATTTAAATCAAATTTGTATC +
Preference number: 6 (lower is better)
Translates to: HKDSSRPPLMWV*RTPSHLNQICI
Trigger: GATACAAATTTGATTTAAATGGGAGGGGGTCCTGCAGACCCACATGAGAGGTGGCCTTGAAGAATCCTTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS GCA 72 bp AGATGTTTCCTATCATCTTCTGGAGCAGTGGTGAGTTaGCTTTTCCAAAGAGCACGCAGAGGTCCAGGATTT +
Preference number: 6 (lower is better)
Translates to: RCFLSSSGAVVS*LFQRARRGPGF
Trigger: AAATCCTGGACCTCTGCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGAAACATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542393.5
CDS CAA 72 bp GTGGGTCTGCAGGACCCCCTCCCATTTAAATCAAATTaGTATCATGGAGTTACAGGTACAAATCAGCGCTGG +
Preference number: 6 (lower is better)
Translates to: VGLQDPLPFKSN*YHGVTGTNQRW
Trigger: CCAGCGCTGATTTGTACCTGTAACTCCATGATACAAATTTGATTTAAATGGGAGGGGGTCCTGCAGACCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000454854.5
ENST00000458594.5
CDS CAA 72 bp AAGATGTTTCCTATCATCTTCTGGAGCAGTGGTGAGTaGCCTTTTCCAAAGAGCACGCAGAGGTCCAGGATT +
Preference number: 6 (lower is better)
Translates to: KMFPIIFWSSGE*PFPKSTQRSRI
Trigger: AATCCTGGACCTCTGCGTGCTCTTTGGAAAAGGCAACTCACCACTGCTCCAGAAGATGATAGGAAACATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542393.5
CDS CCA 72 bp GGTAGGCAGGGTTTCATCCAGGTCACTGTAGTAACTTaGCTGCTGTGTAAAGATGTTTCTTGCAATTGTTCC +
Preference number: 6 (lower is better)
Translates to: GRQGFIQVTVVT*LLCKDVSCNCS
Trigger: GGAACAATTGCAAGAAACATCTTTACACAGCAGCCAAGTTACTACAGTGACCTGGATGAAACCCTGCCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478812.5
CDS TCA 72 bp AAGAAACTTGCCCAAGGTCTCACAGTTAGTGGGTGGTaGAGCAGGCTGGTTCTTAACTATTCACTATACTGT +
Preference number: 6 (lower is better)
Translates to: KKLAQGLTVSGW*SRLVLNYSLYC
Trigger: ACAGTATAGTGAATAGTTAAGAACCAGCCTGCTTCACCACCCACTAACTGTGAGACCTTGGGCAAGTTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492821.1
CDS TCA 72 bp TGTGTAAAGATGTTTCTTGCAATTGTTCCTATAAGATaGAGCTTGTCTCCAAGTGTTTACTATTCTCCAAGT +
Preference number: 6 (lower is better)
Translates to: CVKMFLAIVPIR*SLSPSVYYSPS
Trigger: ACTTGGAGAATAGTAAACACTTGGAGACAAGCTTCATCTTATAGGAACAATTGCAAGAAACATCTTTACACA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478812.5