RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ASAP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000088280

Ensembl transcript IDs: ENST00000336689.8, ENST00000437606.6, ENST00000449467.2, ENST00000465372.5, ENST00000475814.5, ENST00000478858.5, ENST00000484418.1, ENST00000492982.6, ENST00000495646.5, ENST00000530874.1, ENST00000608765.1, ENST00000618240.4, ENST00000634459.1, ENST00000634513.1, ENST00000634548.1, ENST00000634561.2, ENST00000634705.1, ENST00000634883.1, ENST00000635167.1, ENST00000635198.1, ENST00000635351.1, ENST00000635442.1, ENST00000635461.1, ENST00000635693.1

Found 1571 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCAGCAACAACTCGGAGGGGCCCAGCAGGTCCAAGGTGAGTGACTaGATGCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAG +
Preference number: 1 (lower is better)
Translates to: ASNNSEGPSRSKVSD*MREKRTPSSRWTPE
Trigger: CTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGGGCCCCTCCGAGTTGTTGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp GGGTGGCTGCTCCCAGGCTGGCGACAGTCTCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCT +
Preference number: 1 (lower is better)
Translates to: GWLLPGWRQSHRSCC*CPASHWPSEPGPGA
Trigger: AGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACATCAGCAACAAGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp GGAGGTACATCTCCGAAGGGGTGGTCCCGGATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTCGGAGGCCCTCTTCAGAGTTGGGTG +
Preference number: 1 (lower is better)
Translates to: GGTSPKGWSRMSGWV*RCLGALGGPLQSWV
Trigger: CACCCAACTCTGAAGAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACATCCGGGACCACCCCTTCGGAGATGTACCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 90 bp CCAGCCAGGCAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTaGTTGGCTTGGCCCATTCCTGCCAGGGCCCAGCACCCAGCAACT +
Preference number: 1 (lower is better)
Translates to: PARQLCWPLVLSSLP*LAWPIPARAQHPAT
Trigger: AGTTGCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTGCCTGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 90 bp TGGCAAGGGCGGGGGACAGTCCTCACTCTCGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGTCTCATAGGTCTTGTTGCTGATGTC +
Preference number: 1 (lower is better)
Translates to: WQGRGTVLTLALRGG*SQAGDSLIGLVADV
Trigger: GACATCAGCAACAAGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGACTGTCCCCCGCCCTTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 90 bp CCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTCGCTGAGGCTCAGGTGTGCACCGGC +
Preference number: 1 (lower is better)
Translates to: PAHWQRPPVPTGGPC*KWLSRVAEAQVCTG
Trigger: GCCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGCCATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 90 bp TCAGGTGCCTGTGCATCAGGCCCTGGCAGCGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTG +
Preference number: 1 (lower is better)
Translates to: SGACASGPGSGCPKS*PLAKASSTDRRSLL
Trigger: CAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAGGCACCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 90 bp TCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATC +
Preference number: 1 (lower is better)
Translates to: SPLQQQLEAVGLVVE*CVVQSRVPVSSLGI
Trigger: GATGCCAAGGCTGCTGACGGGAACACGGCTCTGCACTACGCAGCACTCTACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCCCAGCACCCAGCAACTGGCAAGTTG +
Preference number: 1 (lower is better)
Translates to: QLCWPLVLSSLPCLA*PIPARAQHPATGKL
Trigger: CAACTTGCCAGTTGCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CCA 90 bp CCTGTGCATCAGGCCCTGGCAGCGGCTGTCCAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGG +
Preference number: 1 (lower is better)
Translates to: PVHQALAAAVQSPAH*QRPPVPTGGPCCKW
Trigger: CCATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp CCTGGGCCTGATGGAGTGCATGTACTGAGGCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGGCAGCCTTCCAGCCATCTTGGAAAA +
Preference number: 1 (lower is better)
Translates to: PGPDGVHVLRPPASR*RGTGSGQPSSHLGK
Trigger: TTTTCCAAGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCATCAGGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp TGGCATGTCTTGCACACCCTTGGACCAAAGTCCGAGAAGAGTTTTTaGCTGGCAAGGGCGGGGGACAGTCCTCACTCTCGCCCTGAGGGG +
Preference number: 1 (lower is better)
Translates to: WHVLHTLGPKSEKSF*LARAGDSPHSRPEG
Trigger: CCCCTCAGGGCGAGAGTGAGGACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACATGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGA +
Preference number: 1 (lower is better)
Translates to: LGRVPDLEVSDGGLS*PCEAPRLTGEIESR
Trigger: TCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 90 bp TCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATaGAAGACGAGTTCTTCAGGTGCCTGTGCATCAGGCCCTGGCAGC +
Preference number: 1 (lower is better)
Translates to: STRGREAWLATLTAK*KTSSSGACASGPGS
Trigger: GCTGCCAGGGCCTGATGCACAGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp TCGCGGGTGAACACGGCCAAGTTTAGGAAGCCTGTGGACAGCTCATaGCTGTTCTGGGACAGGTGGCTGTTGCCTAAGGATTCCACGGCC +
Preference number: 1 (lower is better)
Translates to: SRVNTAKFRKPVDSS*LFWDRWLLPKDSTA
Trigger: GGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTTCCTAAACTTGGCCGTGTTCACCCGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp GCATGTACTGAGGCCGCCAGCTTCTCGATGAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCTTGGAAAAAGTTGTGCTGGGCGTGG +
Preference number: 1 (lower is better)
Translates to: ACTEAASFSMKGNRL*AAFQPSWKKLCWAW
Trigger: CCACGCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGGCCTCAGTACATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp TGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTT +
Preference number: 1 (lower is better)
Translates to: CNTDTHASHSCSSSA*KWYVRLWVTRSKHF
Trigger: AAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR GCA 90 bp TGGGACAGGTGGCTGTTGCCTAAGGATTCCACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATGGATTGCC +
Preference number: 1 (lower is better)
Translates to: WDRWLLPKDSTASRY*SSFSTWPRPELWIA
Trigger: GGCAATCCATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp CTTCATTTACTGTGCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGTAGAGTGCTGCGTAGTGCAGAGCCG +
Preference number: 1 (lower is better)
Translates to: LHLLCQPKLSPSAAA*GSRAGCRVLRSAEP
Trigger: CGGCTCTGCACTACGCAGCACTCTACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGCACAGTAAATGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR GCA 90 bp GGAAGCCTGTGGACAGCTCATGGCTGTTCTGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCTCTCGGTACTGCTCTTCATTCTCCA +
Preference number: 1 (lower is better)
Translates to: GSLWTAHGCSGTGGC*LRIPRPLGTALHSP
Trigger: TGGAGAATGAAGAGCAGTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 90 bp GCAAATGGCTGTCCAGAGTCGCTGAGGCTCAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATACTTGGCCATAATGTAGTCCCTGCG +
Preference number: 1 (lower is better)
Translates to: ANGCPESLRLRCAPA*KPMLHILGHNVVPA
Trigger: CGCAGGGACTACATTATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGCCATTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp AACACGGCCAAGTTTAGGAAGCCTGTGGACAGCTCATGGCTGTTCTaGGACAGGTGGCTGTTGCCTAAGGATTCCACGGCCTCTCGGTAC +
Preference number: 1 (lower is better)
Translates to: NTAKFRKPVDSSWLF*DRWLLPKDSTASRY
Trigger: GTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTTCCTAAACTTGGCCGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp GGGCCTGCTCCAGCAGCTCCTCACACTCCTTGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAA +
Preference number: 1 (lower is better)
Translates to: GPAPAAPHTPCGASS*LCPELSRLLHLLCQ
Trigger: TTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGAGGAGCTGCTGGAGCAGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR CCA 90 bp ATGTCACTCTCAGCTGAGGGTTTAGGGCCGCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTGAAGCTCGTGTTTCCCATGTTCAAG +
Preference number: 1 (lower is better)
Translates to: MSLSAEGLGPPCEGS*ASMTSLKLVFPMFK
Trigger: CTTGAACATGGGAAACACGAGCTTCAATGAGGTCATGGAGGCCCAGCTACCCTCACACGGCGGCCCTAAACCCTCAGCTGAGAGTGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp GTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGGG +
Preference number: 1 (lower is better)
Translates to: VLQKLHRTCWETPSP*AISFSDANRHVPSG
Trigger: CCCAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
3UTR GCA 90 bp CCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACA +
Preference number: 1 (lower is better)
Translates to: PSPTLKTSFPPKDHP*RALVLLVWYLKCLT
Trigger: TGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 90 bp CCACTTTCTCCGTCCCAAACTGCTTGTTGCCTTGGTGCTGGTGGATaGTATAGCCACATCCTGAGTTCTTCCGGCTCAGGTGTTCCTCTC +
Preference number: 1 (lower is better)
Translates to: PLSPSQTACCLGAGG*YSHILSSSGSGVPL
Trigger: GAGAGGAACACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp AAGTTTAGGAAGCCTGTGGACAGCTCATGGCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCCACGGCCTCTCGGTACTGCTCTTCA +
Preference number: 1 (lower is better)
Translates to: KFRKPVDSSWLFWDR*LLPKDSTASRYCSS
Trigger: TGAAGAGCAGTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTTCCTAAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp CTGGAGACTTCAGAACGATCTCCACTGGCATGTCTTGCACACCCTTaGACCAAAGTCCGAGAAGAGTTTTTGACTGGCAAGGGCGGGGGA +
Preference number: 1 (lower is better)
Translates to: LETSERSPLACLAHP*TKVREEFLTGKGGG
Trigger: TCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTGAAGTCTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp AAACTGCTTGTTGCCTTGGTGCTGGTGGATGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTGTTCCTCTCTGCTCTCAAGCTGCAG +
Preference number: 1 (lower is better)
Translates to: KLLVALVLVDAIATS*VLPAQVFLSALKLQ
Trigger: CTGCAGCTTGAGAGCAGAGAGGAACACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGCATCCACCAGCACCAAGGCAACAAGCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 90 bp AGCGCTTCTCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGG +
Preference number: 1 (lower is better)
Translates to: SASLPHPPHCQSQAL*KLPRSSPHVEGRQR
Trigger: CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGAGAAGCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR TCA 90 bp TCTTGGAAAAAGTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTaGAGGAAGTCAGGACCTTGCTTCATCTGGCTCTCCCCGGCTTTG +
Preference number: 1 (lower is better)
Translates to: SWKKLCWAWKNLMRL*RKSGPCFIWLSPAL
Trigger: CAAAGCCGGGGAGAGCCAGATGAAGCAAGGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 90 bp CATATAGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTaGCCCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCA +
Preference number: 1 (lower is better)
Translates to: HIGINQLSPEPCPGI*PCLFPSPTLKTSFP
Trigger: TGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCTATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 90 bp GTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATaGCTAGGGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAG +
Preference number: 1 (lower is better)
Translates to: VGASDSTIWLGNIGE*LGKAVLSLKRSDIQ
Trigger: CTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 90 bp TTTTCTTGTATAGAAAGCCCACTTTCTCCGTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGCTATAGCCACATCCTGAGTTCTTCC +
Preference number: 1 (lower is better)
Translates to: FSCIESPLSPSQTAC*LGAGGCYSHILSSS
Trigger: GGAAGAACTCAGGATGTGGCTATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAAAGTGGGCTTTCTATACAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCT +
Preference number: 2 (lower is better)
Translates to: AHAQFAVDARALDAGEHAGTGGC*LRIPRP
Trigger: AGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCC...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCTGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 2 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR CAA 90 bp CCAGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTaGCTGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCG +
Preference number: 2 (lower is better)
Translates to: PALGSPRKALLRASS*LFCNTDTHASHSCS
Trigger: CGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCATGCGCCGCTCTCTCTaGATGTCCTGGGCCACCTCC +
Preference number: 2 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFMRRSL*MSWATS
Trigger: GGAGGTGGCCCAGGACATGCAGAGAGAGCGGCGCAT...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTC +
Preference number: 2 (lower is better)
Translates to: RGVCSPAVAALAIPRPALPQSQH*LFPGLL
Trigger: GAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGG...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR CAA 90 bp GCCAGGCAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTaGGCTTGGCCCATTCCTGCCAGGGCCCAGCACCCAGCAACTGGC +
Preference number: 2 (lower is better)
Translates to: ARQLCWPLVLSSLPC*AWPIPARAQHPATG
Trigger: GCCAGTTGCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp GCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 2 (lower is better)
Translates to: AMSSFVRSCGSPSWPADPCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...GGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp CCAGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 2 (lower is better)
Translates to: PALGSPRKALLRASSLLFLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...GAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp TTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: FPGLLFTSAMSSFVRSCGPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...GCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 2 (lower is better)
Translates to: AHAQFAVDARALDAGEHAFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR TCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 2 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR TCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTTCGTCCTCCTGGGCCTaGTGGAGTGCATGTACTGAG +
Preference number: 2 (lower is better)
Translates to: RGVCSPAVAALAIPRPALSSSWA*WSACTE
Trigger: CTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: VAALAIPRPALHLRDEQLPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 2 (lower is better)
Translates to: PAVAALAIPRPALHLRDESFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp TGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCAAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 2 (lower is better)
Translates to: WGLQPRSRSTGYSQACSSSFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...TGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp CCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCGAGGGGAGTAACAGCTaGTCCTGGAGAAGAACTGGG +
Preference number: 2 (lower is better)
Translates to: PPTGPVSLGRELQQAALLEGSNS*SWRRTG
Trigger: CCCAGTTCTTCTCCAGGACCAGCTGTTACTCCCCTC...GAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR-3UTR TCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 2 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 2 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGGCTTGGCCCATTCCTaGCAGGGCCCAGCACCCAGC +
Preference number: 2 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSGLAHS*QGPAPS
Trigger: GCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 2 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 2 (lower is better)
Translates to: CSPAVAALAIPRPALHLRSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp GTCGACCGTCCCTCAGCTGCCCCTTCATCAGACTGTCCAGGGGGAAAGAGACAACCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: VDRPSAAPSSDCPGGKRQPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...TTGTCTCTTTCCCCCTGGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 2 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 2 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR CAA 90 bp GCCTGTGCATCAGGCCCTGGCAGCGGCTGTCCAAAGTCCTGCCCATaGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATG +
Preference number: 2 (lower is better)
Translates to: ACASGPGSGCPKSCP*AKASSTDRRSLLQM
Trigger: CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCACTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 2 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 2 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR TCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 2 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR TCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 2 (lower is better)
Translates to: RGVCSPAVAALAIPRPALSESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 2 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTLPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCC +
Preference number: 2 (lower is better)
Translates to: CSPAVAALAIPRPALHLRLFWDR*LLPKDS
Trigger: GGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAG...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACGAGGGGAGTAACAGCTaGTCCTGGAGAAGAACTGGG +
Preference number: 2 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHEGSNS*SWRRTG
Trigger: CCCAGTTCTTCTCCAGGACCAGCTGTTACTCCCCTC...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR-3UTR TCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 2 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 2 (lower is better)
Translates to: VAALAIPRPALHLRDEQLLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: LVLVLCLKVVRPVVGHQVPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 2 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp TCTTCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCATGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 2 (lower is better)
Translates to: SSWLCPELSRLLHLLCQPCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...TGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 2 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR TCA 90 bp GGCCAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 2 (lower is better)
Translates to: GQQGASLAKVAQNLLGDSALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...GGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618240.4
ENST00000635693.1
3UTR-3UTR GCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSDGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 2 (lower is better)
Translates to: VAALAIPRPALHLRDEQLSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp AGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 2 (lower is better)
Translates to: REAWLATLTAKCKTSSSGEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp TCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGCGACCGTCCCTCAGCTaGCCCTTCATCAGACTGTCC +
Preference number: 2 (lower is better)
Translates to: SCPLAKASSTDRRSLLQMRPSLS*PFIRLS
Trigger: GGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCG...CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTAPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 2 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GGCCAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 2 (lower is better)
Translates to: GQQGASLAKVAQNLLGDSLPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...GGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618240.4
ENST00000635693.1
3UTR-3UTR CCA 90 bp TCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 2 (lower is better)
Translates to: SATLTPTPHTRARPLPESPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...ACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 2 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CAA 90 bp GGTTTAGGGCCGCCGTGTGAGGGTAGCTGGGCCTCCATGACCTCATaGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCAACAACTCGGAG +
Preference number: 2 (lower is better)
Translates to: GLGPPCEGSWASMTS*KLVFPMFKASNNSE
Trigger: CTCCGAGTTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGTCATGGAGGCCCAGCTACCCTCACACGGCGGCCCTAAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 2 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp GGCATCCAGGTGACCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 2 (lower is better)
Translates to: GIQVTTVLDDEIHQRQGSCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...GCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGGTCACCTGGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTDGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGTCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACA +
Preference number: 2 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRSGLRP*CSATLT
Trigger: TGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGA...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR GCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 2 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp CAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATCCAGGTGACCACCGTTCTGGATACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGG +
Preference number: 2 (lower is better)
Translates to: QSRVPVSSLGIQVTTVLDTASRY*SSFSTW
Trigger: CCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGT...ATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTASLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCTAGTCTCCCCTGCTTaGCTTGGCCCATTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPILVSPA*LGPFLP
Trigger: TGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCGCCAGGCAGCTGTGTTaGCCATTGGTGCTCTCTAGT +
Preference number: 2 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSARQLC*PLVLSS
Trigger: ACTAGAGAGCACCAATGGCCAACACAGCTGCCTGGC...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSSLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 2 (lower is better)
Translates to: SCPLAKASSTDRRSLLQMKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CAA 90 bp AGGAAGCCTGTGGACAGCTCATGGCTGTTCTGGGACAGGTGGCTGTaGCCTAAGGATTCCACGGCCTCTCGGTACTGCTCTTCATTCTCC +
Preference number: 2 (lower is better)
Translates to: RKPVDSSWLFWDRWL*PKDSTASRYCSSFS
Trigger: GGAGAATGAAGAGCAGTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp TCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 2 (lower is better)
Translates to: SCPLAKASSTDRRSLLQMMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGG +
Preference number: 2 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCTASRY*SSFSTW
Trigger: CCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGT...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp AAAGTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTGAAGGAAGTCAGGACCATGCGCCGCTCTCTCTaGATGTCCTGGGCCACCTCC +
Preference number: 2 (lower is better)
Translates to: KVVLGVEELDEALKEVRTMRRSL*MSWATS
Trigger: GGAGGTGGCCCAGGACATGCAGAGAGAGCGGCGCAT...GGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp CAGGGGTCTCAGGGGCCTCTGAACTCAGGCTGGAGACTTCAGAACGATCTCCACTTCTCCGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 2 (lower is better)
Translates to: QGSQGPLNSGWRLQNDLHFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAA...GTGGAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCACATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 2 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCACCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 2 (lower is better)
Translates to: GREAWLATLTAKCKTSSSPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 2 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 2 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CAA 90 bp GCTGGAGACTTCAGAACGATCTCCACTGGCATGTCTTGCACACCCTaGGACCAAAGTCCGAGAAGAGTTTTTGACTGGCAAGGGCGGGGG +
Preference number: 2 (lower is better)
Translates to: AGDFRTISTGMSCTP*DQSPRRVFDWQGRG
Trigger: CCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTGAAGTCTCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 2 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR TCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCGTACAGCATGCATGTTaGCCAGCCAGAATGGATGTG +
Preference number: 2 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSVQHAC*PARMDV
Trigger: CACATCCATTCTGGCTGGTCAACATGCATGCTGTAC...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp TCTTCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 2 (lower is better)
Translates to: SSWLCPELSRLLHLLCQPSFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...TGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp TCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGC +
Preference number: 2 (lower is better)
Translates to: SCPLAKASSTDRRSLLQMSQTAC*LGAGGC
Trigger: GCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGA...CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCCCACACTTCCTTTTCTaGCAGACTCTTCGAATTCCG +
Preference number: 2 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLPHFLF*QTLRIP
Trigger: CGGAATTCGAAGAGTCTGGCAGAAAAGGAAGTGTGG...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: PESGTSGCGSPGRSTFSPPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...AGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQESLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp TCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 2 (lower is better)
Translates to: SATLTPTPHTRARPLPESFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...ACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CCA 90 bp CAGGGGTCTCAGGGGCCTCTGAACTCAGGCTGGAGACTTCAGAACGATCTCCACAAGTTGTGCTGGGCGTaGAAGAACTTGATGAGGCTC +
Preference number: 2 (lower is better)
Translates to: QGSQGPLNSGWRLQNDLHKLCWA*KNLMRL
Trigger: GAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTT...GTGGAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 2 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp AAGCAGCGCTTCTCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATGTCAGAGGTGGGGTaGAGGGGAGTAACAGCTGGT +
Preference number: 2 (lower is better)
Translates to: KQRFSSSSSSLSEPGSVEMSEVG*RGVTAG
Trigger: ACCAGCTGTTACTCCCCTCCACCCCACCTCTGACAT...TTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGAGAAGCGCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR CAA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTaGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTGCC +
Preference number: 2 (lower is better)
Translates to: PPFWMMKSTRGREAW*ATLTAKCKTSSSGA
Trigger: GGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR-3UTR TCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGTACAGCATGCATGTTaGCCAGCCAGAATGGATGTG +
Preference number: 2 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSVQHAC*PARMDV
Trigger: CACATCCATTCTGGCTGGTCAACATGCATGCTGTAC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCAAATGTGGGTGCATCTaGCTCTACAATTTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSKCGCI*LYNLAG
Trigger: CCCAGCCAAATTGTAGAGTCAGATGCACCCACATTT...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp AAAGTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTGAAGGAAGTCAGGACCCAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 2 (lower is better)
Translates to: KVVLGVEELDEALKEVRTQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...GGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 2 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 2 (lower is better)
Translates to: WLCPELSRLLHLLCQPKLWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...GAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCC +
Preference number: 2 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGLFWDR*LLPKDS
Trigger: GGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAG...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCGCTCCTTCTCCAGCTTaGCCATTTTGGCTTCATAGT +
Preference number: 2 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCAPSPA*PFWLHS
Trigger: ACTATGAAGCCAAAATGGCCAAGCTGGAGAAGGAGC...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCACTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 2 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEALKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR TCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 2 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSSESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCATGCCACTCTGATGGGTaGGATCTGAGCAGATGTCAG +
Preference number: 2 (lower is better)
Translates to: GREAWLATLTAKCKTSSSCHSDG*DLSRCQ
Trigger: CTGACATCTGCTCAGATCTCACCCATCAGAGTGGCA...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR-3UTR GCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 2 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 2 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSRCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAACATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: QANVGASDSTIWLGNIGEHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTACCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp GGCCAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCTCCAGAGCCATGCCCTaGAATCTGACCCTGCCTATT +
Preference number: 2 (lower is better)
Translates to: GQQGASLAKVAQNLLGDSSRAMP*NLTLPI
Trigger: AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGA...GGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618240.4
ENST00000635693.1
3UTR-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCAATGAAACCAGACACTaGGGGCTCAAAAGACAACCC +
Preference number: 2 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSNETRH*GLKRQP
Trigger: GGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATT...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 2 (lower is better)
Translates to: LWKLPRSSPHVEGRQRSPFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...CGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTCTTCATTCTCCACATaGCCAAGGCCGGAGCTATGG +
Preference number: 2 (lower is better)
Translates to: SSSSSSLSEPGSVEITQESSFST*PRPELW
Trigger: CCATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGA...CTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTTCTTCATTCTCCACATaGCCAAGGCCGGAGCTATGG +
Preference number: 2 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSSSFST*PRPELW
Trigger: CCATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGA...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAATGTCAGAGGTGGGGTaGAGGGGAGTAACAGCTGGT +
Preference number: 2 (lower is better)
Translates to: CQSQALWKLPRSSPHVEGMSEVG*RGVTAG
Trigger: ACCAGCTGTTACTCCCCTCCACCCCACCTCTGACAT...TCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR CAA 90 bp TGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTaGACAGCCAAATGCAAGACGAGTTCTTCAGGTGCCTGTGCATCA +
Preference number: 2 (lower is better)
Translates to: WMMKSTRGREAWLAT*TAKCKTSSSGACAS
Trigger: TGATGCACAGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CAA 90 bp TGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTaGACAGCCAAATGCAAGACGAGTTCTTCAGGTGCCACTCTGATG +
Preference number: 2 (lower is better)
Translates to: WMMKSTRGREAWLAT*TAKCKTSSSGATLM
Trigger: CATCAGAGTGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR-3UTR GCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: QANVGASDSTIWLGNIGEDGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp AGCCCACTTTCTCCGTCCCAAACTGCTTGTTGCCTTGGTGCTGGTGGATGCTATTCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACA +
Preference number: 2 (lower is better)
Translates to: SPLSPSQTACCLGAGGCYSGLRP*CSATLT
Trigger: TGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGA...ATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAAAGTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTC +
Preference number: 2 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSTGGPC*KWLSRV
Trigger: GACTCTGGACAGCCATTTGCAACAGGGACCTCCTGT...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp GGCCAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCTCCACTGGCATGTCTTaGACACCCTTGGACCAAAGT +
Preference number: 2 (lower is better)
Translates to: GQQGASLAKVAQNLLGDSSTGMS*TPLDQS
Trigger: ACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGA...GGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 2 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTAGACTAATAAATGGCTaGCTGAGAAGACAGTCCCTA +
Preference number: 2 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGRLING*LRRQSL
Trigger: TAGGGACTGTCTTCTCAGCCAGCCATTTATTAGTCT...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAACCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 2 (lower is better)
Translates to: QANVGASDSTIWLGNIGEPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
3UTR-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAACCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: QANVGASDSTIWLGNIGEPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 2 (lower is better)
Translates to: QANVGASDSTIWLGNIGEAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTAGACTAATAAATGGCTaGCTGAGAAGACAGTCCCTA +
Preference number: 2 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIRLING*LRRQSL
Trigger: TAGGGACTGTCTTCTCAGCCAGCCATTTATTAGTCT...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACAGACTAATAAATGGCTaGCTGAGAAGACAGTCCCTA +
Preference number: 2 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNRLING*LRRQSL
Trigger: TAGGGACTGTCTTCTCAGCCAGCCATTTATTAGTCT...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCTTGTCTTACTCGTGTaGTATCTGAAGTGCCTAACA +
Preference number: 2 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGILVLLV*YLKCLT
Trigger: TGTTAGGCACTTCAGATACCACACGAGTAAGACAAG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCTAGTCTCCCCTGCTTaGCTTGGCCCATTCCTGCCA +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCLVSPA*LGPFLP
Trigger: TGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 2 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp ATGACCTCATTGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCAACAACTCGGAGGTTTATCGTGCTGTGTaGGATGGTCAGGCAGCCATA +
Preference number: 2 (lower is better)
Translates to: MTSLKLVFPMFKASNNSEVYRAV*DGQAAI
Trigger: TATGGCTGCCTGACCATCTCACACAGCACGATAAAC...CTCCGAGTTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCTCTCTAGTCTCCCCTaGTTGGCTTGGCCCATTCCT +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCLSSLP*LAWPIP
Trigger: AGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp ACCTCATTGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCAACAACTCGGAGGGGTCTTGGAAAAAGTTGTaGTGGGCGTGGAAGAACTTG +
Preference number: 2 (lower is better)
Translates to: TSLKLVFPMFKASNNSEGSWKKL*WAWKNL
Trigger: CAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA...CCCCTCCGAGTTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTAGACTAATAAATGGCTaGCTGAGAAGACAGTCCCTA +
Preference number: 2 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPRLING*LRRQSL
Trigger: TAGGGACTGTCTTCTCAGCCAGCCATTTATTAGTCT...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCTCTGACTCTACAATTTaGCTGGGGAATATAGGAGAA +
Preference number: 2 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSSDSTI*LGNIGE
Trigger: TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTAGGCATCCATCAACCCTaGCTATTCCTTTCCTTCCTG +
Preference number: 2 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVGIHQP*LFLSFL
Trigger: CAGGAAGGAAAGGAATAGTCAGGGTTGATGGATGCC...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 2 (lower is better)
Translates to: YFYLTASTACMLTSQNGCHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTTCCAGAGCCATGCCCTaGAATCTGACCCTGCCTATT +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCSRAMP*NLTLPI
Trigger: AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGA...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTACAACCCTGTTCCTGTaGGAACCACAGACCAGTCAG +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCTTLFL*EPQTSQ
Trigger: CTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGAGTAACAGCTGGTCCTaGAGAAGAACTGGGGAATAT +
Preference number: 2 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRSNSWS*RRTGEY
Trigger: ATATTCCCCAGTTCTTCTCCAGGACCAGCTGTTACT...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR-3UTR TCA 90 bp TTTTCTGCCAGACTCTTCGAATTCCGTCACTTTTCTTGTATAGAAAGCCCACTTTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 2 (lower is better)
Translates to: FSARLFEFRHFSCIESPLCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...AAGTGGGCTTTCTATACAAGAAAAGTGACGGAATTCGAAGAGTCTGGCAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR TCA 90 bp TCTTCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAATGTTGTTCAAGTTCTaGATCAGGTTCTTGAAGAGC +
Preference number: 2 (lower is better)
Translates to: SSWLCPELSRLLHLLCQPMLFKF*IRFLKS
Trigger: GCTCTTCAAGAACCTGATTCAGAACTTGAACAACAT...TGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR GCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACCCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 2 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR GCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTTGGCTTAGGTGTATCTaGTTTCTCATTGGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCWLRCI*FLIGAE
Trigger: CTCAGCCCCAATGAGAAAGCAGATACACCTAAGCCA...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CAA 90 bp GAGATGTTAGTGGTTGATGATGGCTTAGGTGTATCTGCTTTCTCATaGGGGCTGAGCAATGATAGAATTTCTAGGGCTGGGAAGCAGAAC +
Preference number: 2 (lower is better)
Translates to: EMLVVDDGLGVSAFS*GLSNDRISRAGKQN
Trigger: GTTCTGCTTCCCAGCCCTAGAAATTCTATCATTGCTCAGCCCCAATGAGAAAGCAGATACACCTAAGCCATCATCAACCACTAACATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 2 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 2 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCTTGTCTTACTCGTGTaGTATCTGAAGTGCCTAACA +
Preference number: 2 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCLVLLV*YLKCLT
Trigger: TGTTAGGCACTTCAGATACCACACGAGTAAGACAAG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTCCAGAGCCATGCCCTaGAATCTGACCCTGCCTATT +
Preference number: 2 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMSRAMP*NLTLPI
Trigger: AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGA...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTATCTGACTCTACAATTTaGCTGGGGAATATAGGAGAA +
Preference number: 2 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVSDSTI*LGNIGE
Trigger: TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR TCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGAAATGTGGGTGCATCTaGCTCTACAATTTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQKCGCI*LYNLAG
Trigger: CCCAGCCAAATTGTAGAGTCAGATGCACCCACATTT...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTCTTGTCTTACTCGTGTaGTATCTGAAGTGCCTAACA +
Preference number: 2 (lower is better)
Translates to: YFYLTASTACMLTSQNGCLVLLV*YLKCLT
Trigger: TGTTAGGCACTTCAGATACCACACGAGTAAGACAAG...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CCA 72 bp GACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATGCAGGTGAGCACGCCC +
Preference number: 3 (lower is better)
Translates to: DCMREKRTPSSR*TPEHWMQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR CCA 72 bp GGTGGTCCCGGATGTCAGGCTGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTCTTCAGAGTTGGGTGG +
Preference number: 3 (lower is better)
Translates to: GGPGCQAGSGGA*GLSEALFRVGW
Trigger: CCACCCAACTCTGAAGAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACATCCGGGACCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp CTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCGGCGGACCCCCAGGAC +
Preference number: 3 (lower is better)
Translates to: LFTSAMSSFVRS*GSPSWPADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR CCA 72 bp AGCCACGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATG +
Preference number: 3 (lower is better)
Translates to: SHVGSAAPQSQH*LFPGLLFTSAM
Trigger: CATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CAA 90 bp CCAGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 3 (lower is better)
Translates to: PALGSPRKALLRASSLLFRVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...GAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR GCA 72 bp AACTCGGAGGGGCCCAGCAGGTCCAAGGTGAGTGACTaGATGCGCGAAAAGCGCACGCCCAGTTCGCGGTGG +
Preference number: 3 (lower is better)
Translates to: NSEGPSRSKVSD*MREKRTPSSRW
Trigger: CCACCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGGGCCCCTCCGAGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 3 (lower is better)
Translates to: RGVCSPAVAALAIPRPALRVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR-3UTR CAA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGTGAGCACGCCCAGGTaGGTGCTGAGCCACGTGGGG +
Preference number: 3 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMVSTPR*VLSHVG
Trigger: CCCCACGTGGCTCAGCACCAACCTGGGCGTGCTCAC...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR TCA 72 bp CAACAACTCGGAGGGGCCCAGCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCGCACGCCCAGTTCGCG +
Preference number: 3 (lower is better)
Translates to: QQLGGAQQVQGE*LHARKAHAQFA
Trigger: CGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGGGCCCCTCCGAGTTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp CAGGCCCTGGCAGCGGCTGTCCAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGT +
Preference number: 3 (lower is better)
Translates to: QALAAAVQSPAH*QRPPVPTGGPC
Trigger: ACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 3 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRRVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR TCA 72 bp GACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCG +
Preference number: 3 (lower is better)
Translates to: DTHASHSCSSSA*KWYVRLWVTRS
Trigger: CGACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR TCA 72 bp CCAGCAACAACTCGGAGGGGCCCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAAAGCGCACGCCCAGTT +
Preference number: 3 (lower is better)
Translates to: PATTRRGPAGPR*VTACAKSARPV
Trigger: AACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGGGCCCCTCCGAGTTGTTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 72 bp CTCCCAGGCTGGCGACAGTCTCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGGCCCAGTGAGCCTGGG +
Preference number: 3 (lower is better)
Translates to: LPGWRQSHRSCC*CPASHWPSEPG
Trigger: CCCAGGCTCACTGGGCCAGTGGGAGGCTGGACATCAGCAACAAGACCTATGAGACTGTCGCCAGCCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp GCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACACCCACGCCTCACACT +
Preference number: 3 (lower is better)
Translates to: APRGRRCSGLRP*CSATLTPTPHT
Trigger: AGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
3UTR GCA 72 bp TTCTTCCGGCTCAGGTGTTCCTCTCTGCTCTCAAGCTaGAGTGTCCCTCGGAGGGAGTCCCGGAGCTGGGTC +
Preference number: 3 (lower is better)
Translates to: FFRLRCSSLLSS*SVPRRESRSWV
Trigger: GACCCAGCTCCGGGACTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGAGGAACACCTGAGCCGGAAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp TGTGCATCAGGCCCTGGCAGCGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCCAGTACCGACAGGAGG +
Preference number: 3 (lower is better)
Translates to: CASGPGSGCPKS*PLAKASSTDRR
Trigger: CCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTGATGCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp CAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGTGTTCCCGTCAGCAGC +
Preference number: 3 (lower is better)
Translates to: QQQLEAVGLVVE*CVVQSRVPVSS
Trigger: GCTGCTGACGGGAACACGGCTCTGCACTACGCAGCACTCTACAACCAGCCCGACTGCCTCAAGCTGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR CCA 72 bp TGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCCCAGCACCCAGCAACT +
Preference number: 3 (lower is better)
Translates to: WPLVLSSLPCLA*PIPARAQHPAT
Trigger: AGTTGCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACATCTCCCCTGCTTGGCTaGGCCCATTCCTGCCAGGGC +
Preference number: 3 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTSPLLG*AHSCQG
Trigger: GCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGA...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCGAAGACAGTCCCTACTaGGCAGGGTCCCTGATCTGG +
Preference number: 3 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPEDSPY*AGSLIW
Trigger: CCAGATCAGGGACCCTGCCAAGTAGGGACTGTCTTC...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR TCA 72 bp GATGGAGTGCATGTACTGAGGCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGGCAGCCTTCCAGCCAT +
Preference number: 3 (lower is better)
Translates to: DGVHVLRPPASR*RGTGSGQPSSH
Trigger: ATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp TCCCCGGCTTTGAGCAGATACTCACACATGTGCAGCTaGAAGATGCGCCGCTCTCTCTGCATGTCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: SPALSRYSHMCS*KMRRSLCMSWA
Trigger: GGCCCAGGACATGCAGAGAGAGCGGCGCATCTTCCAGCTGCACATGTGTGAGTATCTGCTCAAAGCCGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCGAAGACAGTCCCTACTaGGCAGGGTCCCTGATCTGG +
Preference number: 3 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSEDSPY*AGSLIW
Trigger: CCAGATCAGGGACCCTGCCAAGTAGGGACTGTCTTC...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCCAGCTGTGTTGGCCATaGGTGCTCTCTAGTCTCCCC +
Preference number: 3 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSQLCWP*VLSSLP
Trigger: GGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR TCA 72 bp CTGTGCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGTAGAGTGCTGCGTAGT +
Preference number: 3 (lower is better)
Translates to: LCQPKLSPSAAA*GSRAGCRVLRS
Trigger: ACTACGCAGCACTCTACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR CCA 72 bp AAGCCTGTGGACAGCTCATGGCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCCACGGCCTCTCGGTAC +
Preference number: 3 (lower is better)
Translates to: KPVDSSWLFWDR*LLPKDSTASRY
Trigger: GTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp GAGGCCGCCAGCTTCTCGATGAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCTTGGAAAAAGTTGTGC +
Preference number: 3 (lower is better)
Translates to: EAASFSMKGNRL*AAFQPSWKKLC
Trigger: GCACAACTTTTTCCAAGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGGCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp ACACCCTTGGACCAAAGTCCGAGAAGAGTTTTTGACTaGCAAGGGCGGGGGACAGTCCTCACTCTCGCCCTG +
Preference number: 3 (lower is better)
Translates to: TPLDQSPRRVFD*QGRGTVLTLAL
Trigger: CAGGGCGAGAGTGAGGACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGACTTTGGTCCAAGGGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp TGGCTGTTGCCTAAGGATTCCACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGGCCAAGGCCGGAGCTA +
Preference number: 3 (lower is better)
Translates to: WLLPKDSTASRY*SSFSTWPRPEL
Trigger: TAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp TGGACAGCTCATGGCTGTTCTGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCTCTCGGTACTGCTCTT +
Preference number: 3 (lower is better)
Translates to: WTAHGCSGTGGC*LRIPRPLGTAL
Trigger: AAGAGCAGTACCGAGAGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp TGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 3 (lower is better)
Translates to: WLCPELSRLLHLLCQPKLRVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...GAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCTGGGACAGGTGGCTGTaGCCTAAGGATTCCACGGCC +
Preference number: 3 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSWDRWL*PKDSTA
Trigger: GGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCA...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 72 bp GTTGCCTTGGTGCTGGTGGATGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTGTTCCTCTCTGCTCTC +
Preference number: 3 (lower is better)
Translates to: VALVLVDAIATS*VLPAQVFLSAL
Trigger: GAGAGCAGAGAGGAACACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGCATCCACCAGCACCAAGGCAAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATaGAAGACGAGTTCTTCAGGTGCCACTCTGATGGGT +
Preference number: 3 (lower is better)
Translates to: GREAWLATLTAK*KTSSSGATLMG
Trigger: ACCCATCAGAGTGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR CCA 72 bp AAGTTTAGGAAGCCTGTGGACAGCTCATGGCTGTTCTaGGACAGGTGGCTGTTGCCTAAGGATTCCACGGCC +
Preference number: 3 (lower is better)
Translates to: KFRKPVDSSWLF*DRWLLPKDSTA
Trigger: GGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAGCCATGAGCTGTCCACAGGCTTCCTAAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTACCCCTGCAGGGCCCTaGTCTTACTCGTGTGGTATC +
Preference number: 3 (lower is better)
Translates to: RYKPAESRAMPWNLTLPITPAGP*SYSCGI
Trigger: GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGT...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCAGTACAGCATGCATGTaGACCAGCCAGAATGGATGT +
Preference number: 3 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTASTACM*TSQNGC
Trigger: ACATCCATTCTGGCTGGTCAACATGCATGCTGTACT...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp TCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGCCATCTTGGAAAAAGTaGTGCTGGGCGTGGAAGAAC +
Preference number: 3 (lower is better)
Translates to: SCPLAKASSTDRRSLLQMPSWKK*CWAWKN
Trigger: GTTCTTCCACGCCCAGCACAACTTTTTCCAAGATGG...CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 72 bp AATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGAGTTCTTCAGGTGCCT +
Preference number: 3 (lower is better)
Translates to: NPPEAGKPGWRL*QPNARRVLQVP
Trigger: AGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 72 bp AAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGATGCCAACCGGCACGTT +
Preference number: 3 (lower is better)
Translates to: KLHRTCWETPSP*AISFSDANRHV
Trigger: AACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
3UTR TCA 72 bp AATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGAGTTCTTCAGGTGCCA +
Preference number: 3 (lower is better)
Translates to: NPPEAGKPGWRL*QPNARRVLQVP
Trigger: TGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR GCA 72 bp ACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAG +
Preference number: 3 (lower is better)
Translates to: TLKTSFPPKDHP*RALVLLVWYLK
Trigger: CTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 72 bp TGTCCAGAGTCGCTGAGGCTCAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATACTTGGCCATAATGTA +
Preference number: 3 (lower is better)
Translates to: CPESLRLRCAPA*KPMLHILGHNV
Trigger: TACATTATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCGGTGCACACCTGAGCCTCAGCGACTCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp TTGGCCCATTCCTGCCAGGGCCCAGCACCCAGCAACTaGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTA +
Preference number: 3 (lower is better)
Translates to: LAHSCQGPAPSN*QVEMLVVDDGL
Trigger: TAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCAGTACAGCATGCATGTaGACCAGCCAGAATGGATGT +
Preference number: 3 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSSTACM*TSQNGC
Trigger: ACATCCATTCTGGCTGGTCAACATGCATGCTGTACT...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp ATGACCTCATTGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCAACAACTCGGAGTCCGTCCCAAACTGCTaGTTGCCTTGGTGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: MTSLKLVFPMFKASNNSESVPNC*LPWCWW
Trigger: CCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGA...CTCCGAGTTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 72 bp AAGTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTaGAGGAAGTCAGGACCTTGCTTCATCTGGCTCTCC +
Preference number: 3 (lower is better)
Translates to: KLCWAWKNLMRL*RKSGPCFIWLS
Trigger: GGAGAGCCAGATGAAGCAAGGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp TATAGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTaGAATCTGACCCTGCCTATTCCCAAGCCCAACCCT +
Preference number: 3 (lower is better)
Translates to: YRYKPAESRAMP*NLTLPIPKPNP
Trigger: AGGGTTGGGCTTGGGAATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CCA 72 bp CTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGTCCACATGTAGAGGGA +
Preference number: 3 (lower is better)
Translates to: LPHPPHCQSQAL*KLPRSSPHVEG
Trigger: TCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR-3UTR CAA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGACCCCTGCAGGGCCCTaGTCTTACTCGTGTGGTATC +
Preference number: 3 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVTPAGP*SYSCGI
Trigger: GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGT...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCATTCCGTCACTTTTCTaGTATAGAAAGCCCACTTTC +
Preference number: 3 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLIPSLF*YRKPTF
Trigger: GAAAGTGGGCTTTCTATACAAGAAAAGTGACGGAAT...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR-3UTR CAA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCAGCTGTGTTGGCCATaGGTGCTCTCTAGTCTCCCC +
Preference number: 3 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCQLCWP*VLSSLP
Trigger: GGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 72 bp ATAGAAAGCCCACTTTCTCCGTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGCTATAGCCACATCCTG +
Preference number: 3 (lower is better)
Translates to: IESPLSPSQTAC*LGAGGCYSHIL
Trigger: CAGGATGTGGCTATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAAAGTGGGCTTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CCA 72 bp TTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCCAAATGCAAGACGAGT +
Preference number: 3 (lower is better)
Translates to: FWMMKSTRGREA*LATLTAKCKTS
Trigger: ACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR GCA 72 bp GCTGGAGACTTCAGAACGATCTCCACTGGCATGTCTTaGACACCCTTGGACCAAAGTCCGAGAAGAGTTTTT +
Preference number: 3 (lower is better)
Translates to: AGDFRTISTGMS*TPLDQSPRRVF
Trigger: AAAAACTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTGAAGTCTCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR GCA 72 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATaGCTAGGGAAGGCTGTGCTGTCCCTCAAAAGGAGT +
Preference number: 3 (lower is better)
Translates to: SDSTIWLGNIGE*LGKAVLSLKRS
Trigger: ACTCCTTTTGAGGGACAGCACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CCA 72 bp ACACAGGCAAATGTGGGTGCATCTGACTCTACAATTTaGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCT +
Preference number: 3 (lower is better)
Translates to: TQANVGASDSTI*LGNIGECLGKA
Trigger: AGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACACCCCTGCAGGGCCCTaGTCTTACTCGTGTGGTATC +
Preference number: 3 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNTPAGP*SYSCGI
Trigger: GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGT...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR-3UTR CAA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAAGTACAGCATGCATGTaGACCAGCCAGAATGGATGT +
Preference number: 3 (lower is better)
Translates to: QANVGASDSTIWLGNIGESTACM*TSQNGC
Trigger: ACATCCATTCTGGCTGGTCAACATGCATGCTGTACT...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR GCA 72 bp GTCAGGCAGCCATACTTGACTCCACACTTCCTTTTCTaGCAGACTCTTCGAATTCCGTCACTTTTCTTGTAT +
Preference number: 3 (lower is better)
Translates to: VRQPYLTPHFLF*QTLRIPSLFLY
Trigger: ATACAAGAAAAGTGACGGAATTCGAAGAGTCTGGCAGAAAAGGAAGTGTGGAGTCAAGTATGGCTGCCTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR TCA 72 bp CAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTaGTCTGTAGACAATTGTAATGGTCATATAGGTATA +
Preference number: 3 (lower is better)
Translates to: QYSMHVDQPEWM*SVDNCNGHIGI
Trigger: TATACCTATATGACCATTACAATTGTCTACAGATCACATCCATTCTGGCTGGTCAACATGCATGCTGTACTG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCTGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHAWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHAPPASR*RGTGSG
Trigger: CCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGG...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RGVCSPAVAALAIPRPALCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GCCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASHWPSEPGPGASASSASAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...AGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR TCA 90 bp ATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGGGAACTCGGCGACGCTaGACTGCTCCGGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: MSSFVRSCGSPSWPADPQGTRRR*TAPAWR
Trigger: CCGCCATGCCGGAGCAGTTCAGCGTCGCCGAGTTCC...CTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCTCGGCGACGCTGAACTaGTCCGGCATGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPSATLN*SGMAGA
Trigger: CGCGCCCGCCATGCCGGAGCAGTTCAGCGTCGCCGA...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: AMSSFVRSCGSPSWPADPPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...GGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGC
68% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RGVCSPAVAALAIPRPALEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: CSPAVAALAIPRPALHLRALRGG*SQAGDS
Trigger: ACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGC...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: PAVAALAIPRPALHLRDEGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGGAACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: EQLCEVVRLPIMAGGPPGTPSSR*TPEHWM
Trigger: CATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGT...TCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTTGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: RGVCSPAVAALAIPRPALCPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCTGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: CSPAVAALAIPRPALHLRCPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: RGVCSPAVAALAIPRPALAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTATGCGCCGCTCTCTCTaGATGTCCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGMRRSL*MSWATS
Trigger: GGAGGTGGCCCAGGACATGCAGAGAGAGCGGCGCAT...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp TGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCAGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: WGLQPRSRSTGYSQACSSEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...TGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AMSSFVRSCGSPSWPADPPQSQH*LFPGLL
Trigger: GAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGG...GGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp ATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGTGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: MSSFVRSCGSPSWPADPQWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...CTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCTGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LQPRSRSTGYSQACSSPPPPASR*RGTGSG
Trigger: CCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGG...CGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRLPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR TCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMLPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCAGGAAGTCAGGACCTTaGTTCATCTGGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHARKSGP*FIWLSP
Trigger: CGGGGAGAGCCAGATGAAGCAAGGTCCTGACTTCCT...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHASSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp TTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: FPGLLFTSAMSSFVRSCGEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...GCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCGGTACCGGGGCATCTTaGCGGCGAAGGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAGTGAS*RRRRRP
Trigger: GGGCCGCCGCCTTCGCCGCCAAGATGCCCCGGTACC...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp TGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCAACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: WGLQPRSRSTGYSQACSSTPSSR*TPEHWM
Trigger: CATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGT...TGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PAVAALAIPRPALHLRDEPPASR*RGTGSG
Trigger: CCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGG...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp GCCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: ASHWPSEPGPGASASSASQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...AGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR TCA 90 bp CCAGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: PALGSPRKALLRASSLLFQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...GAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCCCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: PPTGPVSLGRELQQAALLPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...GAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCTCGGCGACGCTGAACTaGTCCGGCATGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPASATLN*SGMAGA
Trigger: CGCGCCCGCCATGCCGGAGCAGTTCAGCGTCGCCGA...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFSFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCTGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PPTGPVSLGRELQQAALLCSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...GAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGGLVVE*CVVQSR
Trigger: ACGGCTCTGCACTACGCAGCACTCTACAACCAGCCC...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR GCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACAGGGGTTCTCACCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHRGSHL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGTGAGAACCCCT...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGGTACCGGGGCATCTTaGCGGCGAAGGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAGTGAS*RRRRRP
Trigger: GGGCCGCCGCCTTCGCCGCCAAGATGCCCCGGTACC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACGGTACCGGGGCATCTTaGCGGCGAAGGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNGTGAS*RRRRRP
Trigger: GGGCCGCCGCCTTCGCCGCCAAGATGCCCCGGTACC...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPSLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: AMSSFVRSCGSPSWPADPKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...GGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VAALAIPRPALHLRDEQLAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCTGCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: SAGLPEEGAAQGFVLAVLLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...CAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GTCGACCGTCCCTCAGCTGCCCCTTCATCAGACTGTCCAGGGGGAAAGAGACAAGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: VDRPSAAPSSDCPGGKRQGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...TTGTCTCTTTCCCCCTGGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCACGGCCTCTCGGTACTGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: PRPLGTALHSPHGQGRSYGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...ATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCAATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: WGLQPRSRSTGYSQACSSMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...TGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCCCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGGACCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: EQLCEVVRLPIMAGGPPGPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...TCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CAA 72 bp GGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTaGCTGTTCTGCAACACTGACACCCACGCCTCACAC +
Preference number: 4 (lower is better)
Translates to: GSPRKALLRASS*LFCNTDTHASH
Trigger: GTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGGAACTCGGCGACGCTaGACTGCTCCGGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGGTRRR*TAPAWR
Trigger: CCGCCATGCCGGAGCAGTTCAGCGTCGCCGAGTTCC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: LQPRSRSTGYSQACSSPPQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...CGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGGCTCTCCCCGGCTTTaGGCAGATACTCACACATGT +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGGSPRL*ADTHTC
Trigger: ACATGTGTGAGTATCTGCTCAAAGCCGGGGAGAGCC...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCGTTTATCGTGCTGTGTaGGATGGTCAGGCAGCCATA +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHAVYRAV*DGQAAI
Trigger: TATGGCTGCCTGACCATCTCACACAGCACGATAAAC...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: CSPAVAALAIPRPALHLRAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp ATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGCCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: MSSFVRSCGSPSWPADPQPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...CTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGILPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTTCCTCACTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGSSLSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGA...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTCCTCACTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSSSLSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGA...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCGAACGATTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRERFSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAATCGTTC...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465372.5
ENST00000635461.1
CDS-3UTR GCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTCGGCGACGCTGAACTaGTCCGGCATGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGISATLN*SGMAGA
Trigger: CGCGCCCGCCATGCCGGAGCAGTTCAGCGTCGCCGA...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACATCGGCGACGCTGAACTaGTCCGGCATGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTSATLN*SGMAGA
Trigger: CGCGCCCGCCATGCCGGAGCAGTTCAGCGTCGCCGA...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCTGTCTCTGCTCTCAAGCTaGAGTGTCCCTCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SAGLPEEGAAQGFVLAVLSLLSS*SVPRRE
Trigger: CTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGA...CAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCTGGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SAGLPEEGAAQGFVLAVLGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...CAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATTCTTCAGGTGCCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPFFRCL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGCACCTGAAGAA...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCTCACACTCCTTGTGGTaGTTCTTCCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHASHSLW*FFLAMS
Trigger: GGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGA...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDALRGG*SQAGDS
Trigger: ACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGC...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSALRGG*SQAGDS
Trigger: ACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR GCA 90 bp CAGGGGTCTCAGGGGCCTCTGAACTCAGGCTGGAGACTTCAGAACGATCTCCACGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: QGSQGPLNSGWRLQNDLHALRGG*SQAGDS
Trigger: ACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGC...GTGGAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGIGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGGCTTGGCCCATTCCTaGCAGGGCCCAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGGLAHS*QGPAPS
Trigger: GCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCGGCTTGGCCCATTCCTaGCAGGGCCCAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSGLAHS*QGPAPS
Trigger: GCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCC...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCGGCTTGGCCCATTCCTaGCAGGGCCCAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTAGLAHS*QGPAPS
Trigger: GCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCC...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: FPGLLFTSAMSSFVRSCGSLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...GCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAGGGAGTCCCGGAGCTaGGTCAGCTTCTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPRESRS*VSFCSS
Trigger: CGAGCTACAGAAGCTGACCCAGCTCCGGGACTCCCT...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: HQRQGSLVGDFDSQMQDECGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...CTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMACGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGCCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRPQSQH*LFPGLL
Trigger: GAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGG...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCTGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp CAGCCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTGGTCCCTGTTGCAAATaGCTGTCCAGAGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: QPPTGPVSLGRELQQAALGPCCK*LSRVAE
Trigger: CTCAGCGACTCTGGACAGCCATTTGCAACAGGGACC...AAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCAGGGTTTGGCCTCACTTGGCACGTCAGCAGGGTCAGCTTCACCGGGGGCCGGCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: SGFGLTWHVSRVSFTGGRPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...CCGGCCCCCGGTGAAGCTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGGAACTCGGCGACGCTaGACTGCTCCGGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAGTRRR*TAPAWR
Trigger: CCGCCATGCCGGAGCAGTTCAGCGTCGCCGAGTTCC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635693.1
CDS-3UTR TCA 90 bp AGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCTGGGCTCTCCCCGGCTTTaGGCAGATACTCACACATGT +
Preference number: 4 (lower is better)
Translates to: SAGLPEEGAAQGFVLAVLGSPRL*ADTHTC
Trigger: ACATGTGTGAGTATCTGCTCAAAGCCGGGGAGAGCC...CAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPPPASR*RGTGSG
Trigger: CCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGG...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: CSPAVAALAIPRPALHLRMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp ATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: MSSFVRSCGSPSWPADPQAIATS*VLPAQV
Trigger: CACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGC...CTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LQPRSRSTGYSQACSSPPAIATS*VLPAQV
Trigger: CACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGC...CGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp TGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCATGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: WGLQPRSRSTGYSQACSSCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...TGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTAGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQELPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR TCA 90 bp GGCATCCAGGTGACCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCTCCTCACTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GIQVTTVLDDEIHQRQGSSSLSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGA...GCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGGTCACCTGGATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPSHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGAACGATTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSERFSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAATCGTTC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465372.5
ENST00000635461.1
CDS-3UTR GCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCATGCGCCGCTCTCTCTaGATGTCCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRMRRSL*MSWATS
Trigger: GGAGGTGGCCCAGGACATGCAGAGAGAGCGGCGCAT...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTTCAGGTGTTCCTCTCTaGTCTCAAGCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGSGVPL*SQAAVS
Trigger: GGACACTGCAGCTTGAGAGCAGAGAGGAACACCTGA...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp TCAGGGTTTGGCCTCACTTGGCACGTCAGCAGGGTCAGCTTCACCGGGGGCCGGTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 4 (lower is better)
Translates to: SGFGLTWHVSRVSFTGGRSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...CCGGCCCCCGGTGAAGCTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GCCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCTGGTTGTAGAGTGCTaGGTAGTGCAGAGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: ASHWPSEPGPGASASSASLVVEC*VVQSRV
Trigger: AACACGGCTCTGCACTACGCAGCACTCTACAACCAG...AGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR GCA 90 bp AGCTTCAGCAAGCAGCGCTTCTCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: SFSKQRFSSSSSSLSEPGVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...GCCTGGCTCTGACAGTGAGGAGGATGAGGAAGAGAAGCGCTGCTTGCTGAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR GCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR GCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACGGCTTGGCCCATTCCTaGCAGGGCCCAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNGLAHS*QGPAPS
Trigger: GCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCC...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: AMSSFVRSCGSPSWPADPLFWDR*LLPKDS
Trigger: GGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAG...GGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCGCTCCTTCTCCAGCTTaGCCATTTTGGCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHAAPSPA*PFWLHS
Trigger: ACTATGAAGCCAAAATGGCCAAGCTGGAGAAGGAGC...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGGATTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: EQLCEVVRLPIMAGGPPGFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...TCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQECGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSTPSSR*TPEHWM
Trigger: CATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCGGTCCCTGTTGCAAATaGCTGTCCAGAGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFGPCCK*LSRVAE
Trigger: CTCAGCGACTCTGGACAGCCATTTGCAACAGGGACC...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PPFWMMKSTRGREAWLATAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: PPFWMMKSTRGREAWLATCPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCTGGGTGGGGCTTGGCTaGGATCCCCAGGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: LVLVLCLKVVRPVVGHQVWVGLG*DPQVPR
Trigger: CCTTGGAACCTGGGGATCCCAGCCAAGCCCCACCCA...GACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSLPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDLPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CAA 72 bp CTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTaGGCTTGGCCCATTCCTGCCAGGGCCCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: LCWPLVLSSLPC*AWPIPARAQHP
Trigger: TGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGAACTCGGCGACGCTaGACTGCTCCGGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEGTRRR*TAPAWR
Trigger: CCGCCATGCCGGAGCAGTTCAGCGTCGCCGAGTTCC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CCACGGCCTCTCGGTACTGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PRPLGTALHSPHGQGRSYPPASR*RGTGSG
Trigger: CCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGG...ATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp TCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: SATLTPTPHTRARPLPESAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...ACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGA +
Preference number: 4 (lower is better)
Translates to: CSPAVAALAIPRPALHLRPGWRL*QPNARR
Trigger: TCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGG...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMPSAAA*GSRAGC
Trigger: ACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGG...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCTCTTGGAAAAAGTTGTaGTGGGCGTGGAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: AHAQFAVDARALDAGEHASWKKL*WAWKNL
Trigger: CAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMSFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFRCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFTGGPC*KWLSRV
Trigger: GACTCTGGACAGCCATTTGCAACAGGGACCTCCTGT...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCCTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLLLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: VAALAIPRPALHLRDEQLPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVSLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGTCTCTCTGCATGTCCTaGGCCACCTCCCCAGGGATC +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMSLCMS*ATSPGI
Trigger: GATCCCTGGGGAGGTGGCCCAGGACATGCAGAGAGA...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCTGGCCTTCCAGCCATCTTaGAAAAAGTTGTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: SAGLPEEGAAQGFVLAVLAFQPS*KKLCWA
Trigger: CGCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGC...CAGAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: RGVCSPAVAALAIPRPALFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp TTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: FPGLLFTSAMSSFVRSCGWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...GCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSPQSQH*LFPGLL
Trigger: GAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGG...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCCCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCPQSQH*LFPGLL
Trigger: GAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGG...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGITPSSR*TPEHWM
Trigger: CATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGT...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHCPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR CCA 90 bp CCAGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCCAGAACGATCTCCACTaGCATGTCTTGCACACCCTT +
Preference number: 4 (lower is better)
Translates to: PALGSPRKALLRASSLLFQNDLH*HVLHTL
Trigger: AAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTG...GAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCTGGGTGGGGCTTGGCTaGGATCCCCAGGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSWVGLG*DPQVPR
Trigger: CCTTGGAACCTGGGGATCCCAGCCAAGCCCCACCCA...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCCCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGCCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTACATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNLPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCTCTGCAGGATGGCTTaGTCTCCTTCCAAGATCGGG +
Preference number: 4 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPLCRMA*SPSKIG
Trigger: CCCGATCTTGGAAGGAGACCAAGCCATCCTGCAGAG...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCTTCCAGGTGGGTTATAAGTaGCCCTTGGAGGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PTGPVSLGRELQQAALLFQVGYK*PLEGFS
Trigger: TGAGAACCCCTCCAAGGGCCACTTATAACCCACCTG...GAAGAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR TCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRAIATS*VLPAQV
Trigger: CACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGC...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTTCAGGCAGCCATACTTaGCTCCACACTTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ARKAHAQFAVDARALDAGSGSHT*LHTSFS
Trigger: AGAAAAGGAAGTGTGGAGTCAAGTATGGCTGCCTGA...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: RLTLVLVLCLKVVRPVVGAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...ACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATCCAGGTGACCACCGTTCTGGATCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: QSRVPVSSLGIQVTTVLDQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...ATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp CTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCCCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: LVLVLCLKVVRPVVGHQVPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...GACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp TCTTCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCACTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSWLCPELSRLLHLLCQPLPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...TGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRLPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp GGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GYVQSCLACFIYCANQSSLPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...AGAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCACTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEALPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
CDS-3UTR TCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCTCCGAGAAGAGTTTTTaGCTGGCAAGGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRSEKSF*LARAGD
Trigger: GTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGA...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCGGTCTCAGGGGCCTCTaGACTCAGGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCGLRGL*TQAGDF
Trigger: GAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACC...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CCACGGCCTCTCGGTACTGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATGGTCTCAGGGGCCTCTaGACTCAGGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: PRPLGTALHSPHGQGRSYGLRGL*TQAGDF
Trigger: GAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACC...ATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGIQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACTGCCACTCTGATGGGTaGGATCTGAGCAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHCHSDG*DLSRCQ
Trigger: CTGACATCTGCTCAGATCTCACCCATCAGAGTGGCA...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAGCCGGAGCTATGGATTaGCCGCACAGCCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPAGAMD*PHSLLY
Trigger: ATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGC...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCGACCGTCCCTCAGCTaGCCCTTCATCAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEARPSLS*PFIRLS
Trigger: GGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCCTTGGTGCTGGTGGATaGTATAGCCACATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFLGAGG*YSHILS
Trigger: ACTCAGGATGTGGCTATAGCATCCACCAGCACCAAG...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPSQTAC*LGAGGC
Trigger: GCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGA...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 4 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 4 (lower is better)
Translates to: RLTLVLVLCLKVVRPVVGLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...ACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATCCAGGTGACCACCGTTCTGGATTGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QSRVPVSSLGIQVTTVLDCSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...ATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPCSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp TGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCCGGCGTGCAAACCTATaGTCCACATACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: CSPAVAALAIPRPALHLRRRANL*STYLAI
Trigger: TATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCG...GCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCTTCTTCAGGTGCCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAFFRCL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGCACCTGAAGAA...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCTTCTTCAGGTGCCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAFFRCL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGCACCTGAAGAA...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGTTCTTCAGGTGCCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: ALAIPRPALHLRDEQLCEFFRCL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGCACCTGAAGAA...CTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp TCAGGGTTTGGCCTCACTTGGCACGTCAGCAGGGTCAGCTTCACCGGGGGCCGGCAGAGCTGTCTCGCCTaGTTCATTTACTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SGFGLTWHVSRVSFTGGRQSCLA*FIYCAN
Trigger: GTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTG...CCGGCCCCCGGTGAAGCTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGCCCACTTTCTCCGTCCCAAACTGCTTGTTGCCTTGGTGCTGGTGGATGCTATGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: SPLSPSQTACCLGAGGCYVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...ATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAAAGTGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCTCCACTGGCATGTCTTaGACACCCTTGGACCAAAGT +
Preference number: 4 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGSTGMS*TPLDQS
Trigger: ACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGA...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCCTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSLLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCDGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPADGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPISLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSSLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTTCTCTCTGCATGTCCTaGGCCACCTCCCCAGGGATC +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGSLCMS*ATSPGI
Trigger: GATCCCTGGGGAGGTGGCCCAGGACATGCAGAGAGA...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp CTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGAAGTTGTGCTGGGCGTaGAAGAACTTGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: LQPRSRSTGYSQACSSPPKLCWA*KNLMRL
Trigger: GAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTT...CGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTGCCTTCCAGCCATCTTaGAAAAAGTTGTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: GLQPRSRSTGYSQACSSPAFQPS*KKLCWA
Trigger: CGCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGC...AGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGAGGGAGTCCCGGAGCTaGGTCAGCTTCTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: ALAIPRPALHLRDEQLCERESRS*VSFCSS
Trigger: CGAGCTACAGAAGCTGACCCAGCTCCGGGACTCCCT...CTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTAGGGAGTCCCGGAGCTaGGTCAGCTTCTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGRESRS*VSFCSS
Trigger: CGAGCTACAGAAGCTGACCCAGCTCCGGGACTCCCT...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp TGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAACCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CSATLTPTPHTRARPLPEPQSQH*LFPGLL
Trigger: GAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGG...TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTCTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGCTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCAGAAGAGTTTTTGACTaGCAAGGGCGGGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPRRVFD*QGRGTV
Trigger: GACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCT...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCAGGGGCTCATCAGACTaGAGGAGGAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEARGSSD*RRRLDC
Trigger: GCAGTCCAGCCTCCTCCTCCAGTCTGATGAGCCCCT...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACATGGGTGGGGCTTGGCTaGGATCCCCAGGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTWVGLG*DPQVPR
Trigger: CCTTGGAACCTGGGGATCCCAGCCAAGCCCCACCCA...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPALFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: SCPLAKASSTDRRSLLQMHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCCAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTPPASR*RGTGSG
Trigger: CCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGG...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: VAALAIPRPALHLRDEQLMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTTCGTCCTCCTGGGCCTaGTGGAGTGCATGTACTGAG +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCSSSWA*WSACTE
Trigger: CTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: VAALAIPRPALHLRDEQLAIATS*VLPAQV
Trigger: CACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGC...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp AGCTTCAGCAAGCAGCGCTTCTCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: SFSKQRFSSSSSSLSEPGHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...GCCTGGCTCTGACAGTGAGGAGGATGAGGAAGAGAAGCGCTGCTTGCTGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR TCA 90 bp CACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: HQRQGSLVGDFDSQMQDEHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...CTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIPSAAA*GSRAGC
Trigger: ACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATACTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDILPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: LVLVLCLKVVRPVVGHQVHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...GACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp TGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGATCCTCACTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CQSQALWKLPRSSPHVEGSSLSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGA...TCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGTCCGAGAAGAGTTTTTaGCTGGCAAGGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVSEKSF*LARAGD
Trigger: GTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGA...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSSHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVSHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSGTGGC*LRIPRP
Trigger: AGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCC...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSGTGGC*LRIPRP
Trigger: AGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CCAGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCTCTTGGAAAAAGTTGTaGTGGGCGTGGAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: PALGSPRKALLRASSLLFSWKKL*WAWKNL
Trigger: CAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA...GAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGTCTCTGCTCTCAAGCTaGAGTGTCCCTCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ALAIPRPALHLRDEQLCESLLSS*SVPRRE
Trigger: CTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGA...CTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTCAGGTGTTCCTCTCTaGTCTCAAGCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSSGVPL*SQAAVS
Trigger: GGACACTGCAGCTTGAGAGCAGAGAGGAACACCTGA...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACCTTGGTGCTGGTGGATaGTATAGCCACATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHLGAGG*YSHILS
Trigger: ACTCAGGATGTGGCTATAGCATCCACCAGCACCAAG...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 4 (lower is better)
Translates to: HQRQGSLVGDFDSQMQDESFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...CTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTATGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVCSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACTGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDCSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 4 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRRCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGACGAGTTCTTCAGGTaGCTGTGCATCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSDEFFR*LCIRPW
Trigger: CCAGGGCCTGATGCACAGGCACCTGAAGAACTCGTC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAGLVVE*CVVQSR
Trigger: ACGGCTCTGCACTACGCAGCACTCTACAACCAGCCC...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGCTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLLLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR GCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACCTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNLLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTDGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMADGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCCCAGCTTGGCCATTTTaGCTTCATAGTCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGPAWPF*LHSPSM
Trigger: CATGGAAGGACTATGAAGCCAAAATGGCCAAGCTGG...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHSLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAAGGGAGTCCCGGAGCTaGGTCAGCTTCTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTRESRS*VSFCSS
Trigger: CGAGCTACAGAAGCTGACCCAGCTCCGGGACTCCCT...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp TGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGGGAGTCCCGGAGCTaGGTCAGCTTCTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: CSATLTPTPHTRARPLPERESRS*VSFCSS
Trigger: CGAGCTACAGAAGCTGACCCAGCTCCGGGACTCCCT...TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp AAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCAGGACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: KVVRPVVGHQVEALFLLRTPSSR*TPEHWM
Trigger: CATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGT...CCTGAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: LILLTVRARLCGNYPGVVTPSSR*TPEHWM
Trigger: CATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGT...GACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTAPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCACGGCCTCTCGGTACTGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: PRPLGTALHSPHGQGRSYPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...ATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp TCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTCTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SATLTPTPHTRARPLPESLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...ACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSRGREA*LATLTA
Trigger: GGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACTGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHCGASS*LCPELS
Trigger: AGACAGCTCTGGACATAGCCAGGAAGAAGCACCACA...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGTGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: PAVAALAIPRPALHLRDECGASS*LCPELS
Trigger: AGACAGCTCTGGACATAGCCAGGAAGAAGCACCACA...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTTGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPICPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp TGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: WLCPELSRLLHLLCQPKLCPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...GAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEACPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
CDS-3UTR CCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCTGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCTGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCTGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR CCA 90 bp GGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCACCTCTGAACTCAGGCTaGAGACTTCAGAACGATCTC +
Preference number: 4 (lower is better)
Translates to: GLLFTSAMSSFVRSCGSPPLNSG*RLQNDL
Trigger: GAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGG...TGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTAGGGGCTCATCAGACTaGAGGAGGAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: PPFWMMKSTRGREAWLATRGSSD*RRRLDC
Trigger: GCAGTCCAGCCTCCTCCTCCAGTCTGATGAGCCCCT...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCAGGGGCTCATCAGACTaGAGGAGGAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMARGSSD*RRRLDC
Trigger: GCAGTCCAGCCTCCTCCTCCAGTCTGATGAGCCCCT...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
CDS-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGIGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: SATLTPTPHTRARPLPESWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...ACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGACATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCTAGTCTCCCCTGCTTaGCTTGGCCCATTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEALVSPA*LGPFLP
Trigger: TGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCAAGATCGGGGCATCTTaGCGGCGAAGGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSKIGAS*RRRRRP
Trigger: GGGCCGCCGCCTTCGCCGCCAAGATGCCCCGATCTT...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCAGTAACAGCTGGTCCTaGAGAAGAACTGGGGAATAT +
Preference number: 4 (lower is better)
Translates to: PPTGPVSLGRELQQAALLSNSWS*RRTGEY
Trigger: ATATTCCCCAGTTCTTCTCCAGGACCAGCTGTTACT...GAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGAGCGCAGGCCCAATCTaGCTCTTTCCTTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMSAGPI*LFPSAI
Trigger: GATGGCAGAAGGAAAGAGCCAGATTGGGCCTGCGCT...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRSESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp TGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAATCGTCCTCCTGGGCCTaGTGGAGTGCATGTACTGAG +
Preference number: 4 (lower is better)
Translates to: CSATLTPTPHTRARPLPESSSWA*WSACTE
Trigger: CTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA...TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCTCGTCCTCCTGGGCCTaGTGGAGTGCATGTACTGAG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMASSSWA*WSACTE
Trigger: CTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPICSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp TGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: CSATLTPTPHTRARPLPEAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGACATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHPSAAA*GSRAGC
Trigger: ACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTPSAAA*GSRAGC
Trigger: ACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGG...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR TCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATATCCTCACTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDISSLSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGA...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTTCCGAGAAGAGTTTTTaGCTGGCAAGGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPISEKSF*LARAGD
Trigger: GTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGA...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTCCGAGAAGAGTTTTTaGCTGGCAAGGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: PPFWMMKSTRGREAWLATSEKSF*LARAGD
Trigger: GTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGA...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGTCTCAGGGGCCTCTaGACTCAGGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEGLRGL*TQAGDF
Trigger: GAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACGGTCTCAGGGGCCTCTaGACTCAGGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHGLRGL*TQAGDF
Trigger: GAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACC...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR TCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTSHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMASHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ALHLRDEQLCEVVRLPIMETPSP*AISFSD
Trigger: ATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTC...CATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEALKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTGTGGC*LRIPRP
Trigger: AGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCC...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCAGGAAGTCAGGACCTTaGTTCATCTGGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPARKSGP*FIWLSP
Trigger: CGGGGAGAGCCAGATGAAGCAAGGTCCTGACTTCCT...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPSQTAC*LGAGGC
Trigger: GCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGA...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTTTCTCCGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RLTLVLVLCLKVVRPVVGFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAA...ACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCTTCTCCGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LVLVLCLKVVRPVVGHQVFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAA...GACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp GTCGACCGTCCCTCAGCTGCCCCTTCATCAGACTGTCCAGGGGGAAAGAGACAATCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 4 (lower is better)
Translates to: VDRPSAAPSSDCPGGKRQSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...TTGTCTCTTTCCCCCTGGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: HQRQGSLVGDFDSQMQDECSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...CTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp TTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCCGGCGTGCAAACCTATaGTCCACATACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: FPGLLFTSAMSSFVRSCGRRANL*STYLAI
Trigger: TATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCG...GCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTTCTTCAGGTGCCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHFFRCL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGCACCTGAAGAA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSGLVVE*CVVQSR
Trigger: ACGGCTCTGCACTACGCAGCACTCTACAACCAGCCC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGCAGGTCCAAGGTGAGTGACTGCATGCGCGAAAAGCGCACGCCCAGTTCGCGGTCACACTCCTTGTGGTaGTTCTTCCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: SRSKVSDCMREKRTPSSRSHSLW*FFLAMS
Trigger: GGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGA...CCGCGAACTGGGCGTGCGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATAGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQELLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR GCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCCCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGAGGGGTTCTCACCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: LWKLPRSSPHVEGRQRSPRGSHL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGTGAGAACCCCT...CGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGTACCGGGGCATCTTaGCGGCGAAGGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGTGAS*RRRRRP
Trigger: GGGCCGCCGCCTTCGCCGCCAAGATGCCCCGGTACC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000618240.4
ENST00000634561.2
ENST00000635198.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCTTTGAGCAGATACTCACACATGTGCAGCTGGAAGATGCGCCGCTCTCTCTGCTCTCTCTGCATGTCCTaGGCCACCTCCCCAGGGATC +
Preference number: 4 (lower is better)
Translates to: ALSRYSHMCSWKMRRSLCSLCMS*ATSPGI
Trigger: GATCCCTGGGGAGGTGGCCCAGGACATGCAGAGAGA...GCAGAGAGAGCGGCGCATCTTCCAGCTGCACATGTGTGAGTATCTGCTCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCACGGCCTCTCGGTACTGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATTCACACATGTGCAGCTaGAAGATGCGCCGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PRPLGTALHSPHGQGRSYSHMCS*KMRRSL
Trigger: GAGAGAGCGGCGCATCTTCCAGCTGCACATGTGTGA...ATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ATCAGGTTCTTGAAGAGCGCAGCAACCTCGCGGGTGAACACGGCCAAGTTTAGGAGGGAGTCCCGGAGCTaGGTCAGCTTCTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: IRFLKSAATSRVNTAKFRRESRS*VSFCSS
Trigger: CGAGCTACAGAAGCTGACCCAGCTCCGGGACTCCCT...CCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTGCGCTCTTCAAGAACCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAATGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: CSATLTPTPHTRARPLPEWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTATGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGGTCCCTGTTGCAAATaGCTGTCCAGAGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSGPCCK*LSRVAE
Trigger: CTCAGCGACTCTGGACAGCCATTTGCAACAGGGACC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCCAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTAQSPAH*QRPPVP
Trigger: CGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GGCATCCAGGTGACCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: GIQVTTVLDDEIHQRQGSRGREA*LATLTA
Trigger: GGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCT...GCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGGTCACCTGGATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATAGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATATGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDICPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTATGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVCPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
CDS-3UTR CCA 90 bp TCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTTGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: SATLTPTPHTRARPLPESWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...ACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCAGAAGAGTTTTTGACTaGCAAGGGCGGGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRRRVFD*QGRGTV
Trigger: GACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCT...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGCCCACTTTCTCCGTCCCAAACTGCTTGTTGCCTTGGTGCTGGTGGATGCTATTGGGTGGGGCTTGGCTaGGATCCCCAGGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SPLSPSQTACCLGAGGCYWVGLG*DPQVPR
Trigger: CCTTGGAACCTGGGGATCCCAGCCAAGCCCCACCCA...ATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAAAGTGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CCACATCCTGAGTTCTTCCGGCTCAGGTGTTCCTCTCTGCTCTCAAGCTGCAGTCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: PHPEFFRLRCSSLLSSCSLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...ACTGCAGCTTGAGAGCAGAGAGGAACACCTGAGCCGGAAGAACTCAGGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCAGGATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: KVVRPVVGHQVEALFLLRMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...CCTGAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGIPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEASLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGGGGTCTCAGGGGCCTCTGAACTCAGGCTGGAGACTTCAGAACGATCTCCACTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: QGSQGPLNSGWRLQNDLHSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GTGGAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTCTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPILPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCAGCTGCCCCTTCATCAGACTGTCCAGGGGGAAAGAGACAATGTTGTTCAAGTAAGATCGGGGCATCTTaGCGGCGAAGGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: SAAPSSDCPGGKRQCCSSKIGAS*RRRRRP
Trigger: GGGCCGCCGCCTTCGCCGCCAAGATGCCCCGATCTT...ACTTGAACAACATTGTCTCTTTCCCCCTGGACAGTCTGATGAAGGGGCAGCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCAATATGTTAGACAGGTaGGTTATAAGTGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PPTGPVSLGRELQQAALLNMLDR*VISGPW
Trigger: CCAAGGGCCACTTATAACCCACCTGTCTAACATATT...GAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTAATGTCAGAGGTGGGGTaGAGGGGAGTAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVMSEVG*RGVTAG
Trigger: ACCAGCTGTTACTCCCCTCCACCCCACCTCTGACAT...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTAAGCGCAGGCCCAATCTaGCTCTTTCCTTCTGCCATC +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVSAGPI*LFPSAI
Trigger: GATGGCAGAAGGAAAGAGCCAGATTGGGCCTGCGCT...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGACAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
CDS-3UTR TCA 90 bp AAGCAGCGCTTCTCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAACCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: KQRFSSSSSSLSEPGSVEPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...TTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGAGAAGCGCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR TCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGA +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSPGWRL*QPNARR
Trigger: TCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGG...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGA +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAPGWRL*QPNARR
Trigger: TCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTCCCACTGGCCCAGTaGGCCTGGGCCGGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLPLAQ*AWAGSF
Trigger: GAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
CDS-3UTR TCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTATCCTCACTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVSSLSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGA...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCACAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMALKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGILKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPILKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGCTCTCCTGCCCTTGTaGAGCCCCCAGACTGACGGG +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVALLPL*SPQTDG
Trigger: CCCGTCAGTCTGGGGGCTTCACAAGGGCAGGAGAGC...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCGGCGACGCTGAACTaGTCCGGCATGGCGGGCGCG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSATLN*SGMAGA
Trigger: CGCGCCCGCCATGCCGGAGCAGTTCAGCGTCGCCGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR GCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTGCCGGAGCTATGGATTaGCCGCACAGCCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGAGAMD*PHSLLY
Trigger: ATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGC...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCCGACCGTCCCTCAGCTaGCCCTTCATCAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: LKVVRPVVGHQVEALFLLRPSLS*PFIRLS
Trigger: GGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCG...GAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCATGCGCCGCTCTCTCTaGATGTCCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSMRRSL*MSWATS
Trigger: GGAGGTGGCCCAGGACATGCAGAGAGAGCGGCGCAT...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGTCTTGGAAAAAGTTGTaGTGGGCGTGGAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: PAVAALAIPRPALHLRDESWKKL*WAWKNL
Trigger: CAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTCTCTGCTCTCAAGCTaGAGTGTCCCTCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQESLLSS*SVPRRE
Trigger: CTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCTCAGGTGTTCCTCTCTaGTCTCAAGCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTASGVPL*SQAAVS
Trigger: GGACACTGCAGCTTGAGAGCAGAGAGGAACACCTGA...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCTTGGTGCTGGTGGATaGTATAGCCACATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: RLTLVLVLCLKVVRPVVGLGAGG*YSHILS
Trigger: ACTCAGGATGTGGCTATAGCATCCACCAGCACCAAG...ACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCTTCTCCGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAA...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CCACGGCCTCTCGGTACTGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATTTCTCCGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PRPLGTALHSPHGQGRSYFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAA...ATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCCCACACTTCCTTTTCTaGCAGACTCTTCGAATTCCG +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSPHFLF*QTLRIP
Trigger: CGGAATTCGAAGAGTCTGGCAGAAAAGGAAGTGTGG...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACA +
Preference number: 4 (lower is better)
Translates to: VAALAIPRPALHLRDEQLSGLRP*CSATLT
Trigger: TGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGA...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATACCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTAGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGATGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGCSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATCCAGGTGACCACCGTTCTGGATCGGCGTGCAAACCTATaGTCCACATACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: QSRVPVSSLGIQVTTVLDRRANL*STYLAI
Trigger: TATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCG...ATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSRCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTARCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPATGGPC*KWLSRV
Trigger: GACTCTGGACAGCCATTTGCAACAGGGACCTCCTGT...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCGACGAGTTCTTCAGGTaGCTGTGCATCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTDEFFR*LCIRPW
Trigger: CCAGGGCCTGATGCACAGGCACCTGAAGAACTCGTC...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGACGAGTTCTTCAGGTaGCTGTGCATCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEDEFFR*LCIRPW
Trigger: CCAGGGCCTGATGCACAGGCACCTGAAGAACTCGTC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CAGGGGTCTCAGGGGCCTCTGAACTCAGGCTGGAGACTTCAGAACGATCTCCACCTGGTTGTAGAGTGCTaGGTAGTGCAGAGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: QGSQGPLNSGWRLQNDLHLVVEC*VVQSRV
Trigger: AACACGGCTCTGCACTACGCAGCACTCTACAACCAG...GTGGAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATCCAGGTGACCACCGTTCTGGATTCACACTCCTTGTGGTaGTTCTTCCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: QSRVPVSSLGIQVTTVLDSHSLW*FFLAMS
Trigger: GGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGA...ATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTAGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVALRGG*SQAGDS
Trigger: ACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGC...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGCTGGGTCTGGAGGTaGCTGGGGGCTCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGWVWR*LGALGG
Trigger: GCCTCCGAGAGCCCCCAGGCACCTCCAGACCCAGCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR GCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCAAGTTGCACAGAACTTaGTGGGAGACTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPKLHRT*WETPSP
Trigger: AGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGCCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTCCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCTCTCTAGTCTCCCCTaGTTGGCTTGGCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGILSSLP*LAWPIP
Trigger: AGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACTCTCTAGTCTCCCCTaGTTGGCTTGGCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTLSSLP*LAWPIP
Trigger: AGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTTGTGTTGGCCATTGGTaGTCTCTAGTCTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGCVGHW*SLVSPA
Trigger: AGCAGGGGAGACTAGAGAGCACCAATGGCCAACACA...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGTGTGTTGGCCATTGGTaGTCTCTAGTCTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVCVGHW*SLVSPA
Trigger: AGCAGGGGAGACTAGAGAGCACCAATGGCCAACACA...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTTTCCTTCTGCCATCCAGAGGCCTGAGGGACAGGGCTGGGACCCACCTTCTCAAGTTGTGCTGGGCGTaGAAGAACTTGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SFLLPSRGLRDRAGTHLLKLCWA*KNLMRL
Trigger: GAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTT...GAGAAGGTGGGTCCCAGCCCTGTCCCTCAGGCCTCTGGATGGCAGAAGGAAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGTGGAAAAAGTTGTGCTaGGCGTGGAAGAACTTGATG +
Preference number: 4 (lower is better)
Translates to: PAVAALAIPRPALHLRDEWKKLC*AWKNLM
Trigger: CATCAAGTTCTTCCACGCCCAGCACAACTTTTTCCA...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGCGGCTCCCCATCATaGCCGGCGGACCCCCAGGAC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKCGSPS*PADPQD
Trigger: GTCCTGGGGGTCCGCCGGCCATGATGGGGAGCCGCA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATATGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTQSPAH*QRPPVP
Trigger: CGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTCAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: PPFWMMKSTRGREAWLATQSPAH*QRPPVP
Trigger: CGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp ATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCCTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: MKSTRGREAWLATLTAKCLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...GCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp CTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LILLTVRARLCGNYPGVVLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...GACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPRGREA*LATLTA
Trigger: GGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCT...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCAGGTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: KVVRPVVGHQVEALFLLRSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...CCTGAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCATCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: GREAWLATLTAKCKTSSSSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: VAALAIPRPALHLRDEQLCGASS*LCPELS
Trigger: AGACAGCTCTGGACATAGCCAGGAAGAAGCACCACA...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR CCA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGATGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCTGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTAGAAGAGTTTTTGACTaGCAAGGGCGGGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCRRVFD*QGRGTV
Trigger: GACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCT...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGGTCTGGAGGTGCCTaGGGGCTCTCGGAGGCCCTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGSGGA*GLSEAL
Trigger: GAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGACCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTACCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATACCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMASLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTCCAGAGCCATGCCCTaGAATCTGACCCTGCCTATT +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSSRAMP*NLTLPI
Trigger: AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGA...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTACTCCCCTGCTTGGCTTaGCCCATTCCTGCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVLPCLA*PIPARA
Trigger: GGCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAG...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCTAGTCTCCCCTGCTTaGCTTGGCCCATTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHLVSPA*LGPFLP
Trigger: TGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGAGCTGTGTTGGCCATTaGTGCTCTCTAGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVSCVGH*CSLVSP
Trigger: AGGGGAGACTAGAGAGCACCAATGGCCAACACAGCT...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCAGCTGTGTTGGCCATTaGTGCTCTCTAGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTASCVGH*CSLVSP
Trigger: AGGGGAGACTAGAGAGCACCAATGGCCAACACAGCT...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGCCAGGCAGCTGTGTTaGCCATTGGTGCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAARQLC*PLVLSS
Trigger: ACTAGAGAGCACCAATGGCCAACACAGCTGCCTGGC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCACAACCCTGTTCCTGTaGGAACCACAGACCAGTCAG +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSTTLFL*EPQTSQ
Trigger: CTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGCATCCAGGTGACCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTCTGCAGGATGGCTTaGTCTCCTTCCAAGATCGGG +
Preference number: 4 (lower is better)
Translates to: GIQVTTVLDDEIHQRQGSLCRMA*SPSKIG
Trigger: CCCGATCTTGGAAGGAGACCAAGCCATCCTGCAGAG...GCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGGTCACCTGGATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTAGTTATAAGTGGCCCTTaGAGGGGTTCTCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVVISGP*RGSHLC
Trigger: GCACAGGTGAGAACCCCTCCAAGGGCCACTTATAAC...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCACCTGAGGGACAGGGCTaGGACCCACCTTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GREAWLATLTAKCKTSSSPEGQG*DPPSLP
Trigger: AGGAAGAGAAGGTGGGTCCCAGCCCTGTCCCTCAGG...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGAACTCGGCGACGCTaGACTGCTCCGGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGTRRR*TAPAWR
Trigger: CCGCCATGCCGGAGCAGTTCAGCGTCGCCGAGTTCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCACAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: GREAWLATLTAKCKTSSSQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: HQRQGSLVGDFDSQMQDESESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...CTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLSESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp TCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTCGTCCTCCTGGGCCTaGTGGAGTGCATGTACTGAG +
Preference number: 4 (lower is better)
Translates to: SSSSSSLSEPGSVEITQESSSWA*WSACTE
Trigger: CTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA...CTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCAGGTCGTCCTCCTGGGCCTaGTGGAGTGCATGTACTGAG +
Preference number: 4 (lower is better)
Translates to: KVVRPVVGHQVEALFLLRSSSWA*WSACTE
Trigger: CTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA...CCTGAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp CTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LKVVRPVVGHQVEALFLLCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...GAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR TCA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGA +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTPGWRL*QPNARR
Trigger: TCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp GGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: GYVQSCLACFIYCANQSSPSAAA*GSRAGC
Trigger: ACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGG...AGAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp TGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGACCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: CQSQALWKLPRSSPHVEGPSAAA*GSRAGC
Trigger: ACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGG...TCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp TCTTCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCACCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SSWLCPELSRLLHLLCQPPSAAA*GSRAGC
Trigger: ACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGG...TGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCCTCACTCTCGCCCTaGGGGGTGGCTGCTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSSLSP*GVAAPR
Trigger: CCTGGGAGCAGCCACCCCTCAGGGCGAGAGTGAGGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTGGTCTCAGGGGCCTCTaGACTCAGGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIGLRGL*TQAGDF
Trigger: GAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACC...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAETPSP*AISFSD
Trigger: ATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCGTACAGCATGCATGTTaGCCAGCCAGAATGGATGTG +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSVQHAC*PARMDV
Trigger: CACATCCATTCTGGCTGGTCAACATGCATGCTGTAC...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCGGCATCCATCAACCCTaGCTATTCCTTTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAGIHQP*LFLSFL
Trigger: CAGGAAGGAAAGGAATAGTCAGGGTTGATGGATGCC...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACGGCATCCATCAACCCTaGCTATTCCTTTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDGIHQP*LFLSFL
Trigger: CAGGAAGGAAAGGAATAGTCAGGGTTGATGGATGCC...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTGCCGGAGCTATGGATTaGCCGCACAGCCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: PPFWMMKSTRGREAWLATAGAMD*PHSLLY
Trigger: ATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGC...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNTASRY*SSFSTW
Trigger: CCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGT...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: GREAWLATLTAKCKTSSSGTGGC*LRIPRP
Trigger: AGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCC...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp TGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCCGACCGTCCCTCAGCTaGCCCTTCATCAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: WLCPELSRLLHLLCQPKLRPSLS*PFIRLS
Trigger: GGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCG...GAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTCGACCGTCCCTCAGCTaGCCCTTCATCAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIRPSLS*PFIRLS
Trigger: GGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCG...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGAGGAAGTCAGGACCTTaGTTCATCTGGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGRKSGP*FIWLSP
Trigger: CGGGGAGAGCCAGATGAAGCAAGGTCCTGACTTCCT...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GGCCAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCTCTCTGCTCTCAAGCTaGAGTGTCCCTCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GQQGASLAKVAQNLLGDSSLLSS*SVPRRE
Trigger: CTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGA...GGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCAGGTCTCTGCTCTCAAGCTaGAGTGTCCCTCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KVVRPVVGHQVEALFLLRSLLSS*SVPRRE
Trigger: CTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGA...CCTGAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTATCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACA +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVSGLRP*CSATLT
Trigger: TGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGA...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTTCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACA +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCSGLRP*CSATLT
Trigger: TGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGA...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 4 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSSFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGAGCCACGTGGGGTCTaGAGCCCCGCAGTCGCAGCA +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKEPRGV*SPAVAA
Trigger: TGCTGCGACTGCGGGGCTGCAGACCCCACGTGGCTC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGCGGCGTGCAAACCTATaGTCCACATACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVRRANL*STYLAI
Trigger: TATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCG...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: PPFWMMKSTRGREAWLATTGGPC*KWLSRV
Trigger: GACTCTGGACAGCCATTTGCAACAGGGACCTCCTGT...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGITGGPC*KWLSRV
Trigger: GACTCTGGACAGCCATTTGCAACAGGGACCTCCTGT...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: HQRQGSLVGDFDSQMQDETGGPC*KWLSRV
Trigger: GACTCTGGACAGCCATTTGCAACAGGGACCTCCTGT...CTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp CTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LILLTVRARLCGNYPGVVGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...GACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp TCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGGACGAGTTCTTCAGGTaGCTGTGCATCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSSSSLSEPGSVEITQEDEFFR*LCIRPW
Trigger: CCAGGGCCTGATGCACAGGCACCTGAAGAACTCGTC...CTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCCTGGTTGTAGAGTGCTaGGTAGTGCAGAGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSLVVEC*VVQSRV
Trigger: AACACGGCTCTGCACTACGCAGCACTCTACAACCAG...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCTGGTTGTAGAGTGCTaGGTAGTGCAGAGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGILVVEC*VVQSRV
Trigger: AACACGGCTCTGCACTACGCAGCACTCTACAACCAG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp TCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: SSSSSSLSEPGSVEITQEGLVVE*CVVQSR
Trigger: ACGGCTCTGCACTACGCAGCACTCTACAACCAGCCC...CTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp CTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LWKLPRSSPHVEGRQRSPGLVVE*CVVQSR
Trigger: ACGGCTCTGCACTACGCAGCACTCTACAACCAGCCC...CGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCTCACACTCCTTGTGGTaGTTCTTCCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTASHSLW*FFLAMS
Trigger: GGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGA...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTTCACACTCCTTGTGGTaGTTCTTCCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCSHSLW*FFLAMS
Trigger: GGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGA...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCALRGG*SQAGDS
Trigger: ACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGC...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKALRGG*SQAGDS
Trigger: ACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
CDS-3UTR GCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCTCCACTGGCATGTCTTaGACACCCTTGGACCAAAGT +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTASTGMS*TPLDQS
Trigger: ACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGA...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTCTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: REAWLATLTAKCKTSSSGLLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAGTTGCACAGAACTTaGTGGGAGACTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCKLHRT*WETPSP
Trigger: AGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCAAGTTGCACAGAACTTaGTGGGAGACTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAKLHRT*WETPSP
Trigger: AGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGCTTGGCCCATTCCTaGCAGGGCCCAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGLAHS*QGPAPS
Trigger: GCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGCTCTCTAGTCTCCCCTaGTTGGCTTGGCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDELSSLP*LAWPIP
Trigger: AGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAG...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCTCTCTAGTCTCCCCTaGTTGGCTTGGCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTLSSLP*LAWPIP
Trigger: AGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAG...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCTGTGTTGGCCATTGGTaGTCTCTAGTCTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMACVGHW*SLVSPA
Trigger: AGCAGGGGAGACTAGAGAGCACCAATGGCCAACACA...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGAAGTTGTGCTGGGCGTaGAAGAACTTGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: ALAIPRPALHLRDEQLCEKLCWA*KNLMRL
Trigger: GAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTT...CTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTGGAAAAAGTTGTGCTaGGCGTGGAAGAACTTGATG +
Preference number: 4 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSWKKLC*AWKNLM
Trigger: CATCAAGTTCTTCCACGCCCAGCACAACTTTTTCCA...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: GREAWLATLTAKCKTSSSKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGGGTCCCTGTTGCAAATaGCTGTCCAGAGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGGPCCK*LSRVAE
Trigger: CTCAGCGACTCTGGACAGCCATTTGCAACAGGGACC...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGQSPAH*QRPPVP
Trigger: CGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGCTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACTCCTCACACTCCTTGTaGTGCTTCTTCCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDSSHSL*CFFLAM
Trigger: CATAGCCAGGAAGAAGCACCACAAGGAGTGTGAGGA...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGTCCAGCCTCCCACTaGCCCAGTGAGCCTGGGCCG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKCPASH*PSEPGP
Trigger: CGGCCCAGGCTCACTGGGCCAGTGGGAGGCTGGACA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
CDS-3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTAGAAGAGTTTTTGACTaGCAAGGGCGGGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIRRVFD*QGRGTV
Trigger: GACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCT...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACTGTCTTGCACACCCTTaGACCAAAGTCCGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDCLAHP*TKVREE
Trigger: CTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACA...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCACGGCCTCTCGGTACTGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATTGTCTTGCACACCCTTaGACCAAAGTCCGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PRPLGTALHSPHGQGRSYCLAHP*TKVREE
Trigger: CTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACA...ATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCCAGAACGATCTCCACTaGCATGTCTTGCACACCCTT +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTAQNDLH*HVLHTL
Trigger: AAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTG...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCAGAACGATCTCCACTaGCATGTCTTGCACACCCTT +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSQNDLH*HVLHTL
Trigger: AAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTG...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CAAAGTCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCCAGAACGATCTCCACTaGCATGTCTTGCACACCCTT +
Preference number: 4 (lower is better)
Translates to: QSPAHWQRPPVPTGGPCCQNDLH*HVLHTL
Trigger: AAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTG...GCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGCCTCTGAACTCAGGCTaGAGACTTCAGAACGATCTC +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVPLNSG*RLQNDL
Trigger: GAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGG...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCCCTCTGAACTCAGGCTaGAGACTTCAGAACGATCTC +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSPLNSG*RLQNDL
Trigger: GAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGG...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCCTCTGAACTCAGGCTaGAGACTTCAGAACGATCTC +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSPLNSG*RLQNDL
Trigger: GAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGG...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCAAGGGGCTCATCAGACTaGAGGAGGAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEARGSSD*RRRLDC
Trigger: GCAGTCCAGCCTCCTCCTCCAGTCTGATGAGCCCCT...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
CDS-3UTR CCA 90 bp GGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: GYVQSCLACFIYCANQSSGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...AGAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AAAGTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTGAAGGAAGTCAGGACCTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: KVVLGVEELDEALKEVRTWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...GGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTACCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDESLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTAGCTGTGTTGGCCATTaGTGCTCTCTAGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPISCVGH*CSLVSP
Trigger: AGGGGAGACTAGAGAGCACCAATGGCCAACACAGCT...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCAGCTGTGTTGGCCATTaGTGCTCTCTAGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGISCVGH*CSLVSP
Trigger: AGGGGAGACTAGAGAGCACCAATGGCCAACACAGCT...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCGCCAGGCAGCTGTGTTaGCCATTGGTGCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTARQLC*PLVLSS
Trigger: ACTAGAGAGCACCAATGGCCAACACAGCTGCCTGGC...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGGCCAGGCAGCTGTGTTaGCCATTGGTGCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEARQLC*PLVLSS
Trigger: ACTAGAGAGCACCAATGGCCAACACAGCTGCCTGGC...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGATGTCAGAGGTGGGGTaGAGGGGAGTAACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGMSEVG*RGVTAG
Trigger: ACCAGCTGTTACTCCCCTCCACCCCACCTCTGACAT...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCCCTGAGGGACAGGGCTaGGACCCACCTTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSPEGQG*DPPSLP
Trigger: AGGAAGAGAAGGTGGGTCCCAGCCCTGTCCCTCAGG...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQESESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CCACATCCTGAGTTCTTCCGGCTCAGGTGTTCCTCTCTGCTCTCAAGCTGCAGTTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: PHPEFFRLRCSSLLSSCSSESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...ACTGCAGCTTGAGAGCAGAGAGGAACACCTGAGCCGGAAGAACTCAGGATGTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCTCAGGCAGCCATACTTaGCTCCACACTTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEASGSHT*LHTSFS
Trigger: AGAAAAGGAAGTGTGGAGTCAAGTATGGCTGCCTGA...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACGTTTATCGTGCTGTGTaGGATGGTCAGGCAGCCATA +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNVYRAV*DGQAAI
Trigger: TATGGCTGCCTGACCATCTCACACAGCACGATAAAC...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTGTTTATCGTGCTGTGTaGGATGGTCAGGCAGCCATA +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIVYRAV*DGQAAI
Trigger: TATGGCTGCCTGACCATCTCACACAGCACGATAAAC...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: GYVQSCLACFIYCANQSSQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...AGAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCACCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
CDS-3UTR TCA 90 bp GGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTCCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: GYVQSCLACFIYCANQSSPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...AGAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp AGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTCCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: REAWLATLTAKCKTSSSGPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTGCTGTCCAGAGTCGCTaGGGCTCAGGTGTGCACCGG +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCAVQSR*GSGVHR
Trigger: CCGGTGCACACCTGAGCCTCAGCGACTCTGGACAGC...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp AGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTTCCGAGAAGAGTTTTTaGCTGGCAAGGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: REAWLATLTAKCKTSSSGSEKSF*LARAGD
Trigger: GTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGA...ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGGTCTCAGGGGCCTCTaGACTCAGGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVGLRGL*TQAGDF
Trigger: GAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACC...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
CDS-3UTR TCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTACAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp AGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: REAWLATLTAKCKTSSSGSHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCAAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEASHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTETPSP*AISFSD
Trigger: ATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTC...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEETPSP*AISFSD
Trigger: ATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTC...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHETPSP*AISFSD
Trigger: ATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTC...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGAGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGETPSP*AISFSD
Trigger: ATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTC...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGGTACAGCATGCATGTTaGCCAGCCAGAATGGATGTG +
Preference number: 4 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLVQHAC*PARMDV
Trigger: CACATCCATTCTGGCTGGTCAACATGCATGCTGTAC...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618240.4
ENST00000635693.1
CDS-3UTR TCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGAAATGTGGGTGCATCTaGCTCTACAATTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVKCGCI*LYNLAG
Trigger: CCCAGCCAAATTGTAGAGTCAGATGCACCCACATTT...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTAAATGTGGGTGCATCTaGCTCTACAATTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCKCGCI*LYNLAG
Trigger: CCCAGCCAAATTGTAGAGTCAGATGCACCCACATTT...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACGGCATCCATCAACCCTaGCTATTCCTTTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNGIHQP*LFLSFL
Trigger: CAGGAAGGAAAGGAATAGTCAGGGTTGATGGATGCC...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GCCAACCAAAGCTCTCCCCTTCAGCAGCAGCTTGAGGCAGTCGGGCTGGTTGTAGCCTTCTTTATTCTCTaGAGGATGGCTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ANQSSPLQQQLEAVGLVVAFFIL*RMAWSP
Trigger: AGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGC...TACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGGGAGAGCTTTGGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GTCGACCGTCCCTCAGCTGCCCCTTCATCAGACTGTCCAGGGGGAAAGAGACAAGCCTTCTTTATTCTCTaGAGGATGGCTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: VDRPSAAPSSDCPGGKRQAFFIL*RMAWSP
Trigger: AGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGC...TTGTCTCTTTCCCCCTGGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGGCCGGAGCTATGGATTaGCCGCACAGCCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEAGAMD*PHSLLY
Trigger: ATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGC...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp TGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: WLCPELSRLLHLLCQPKLGTGGC*LRIPRP
Trigger: AGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCC...GAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTAATGCGCCGCTCTCTCTaGATGTCCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVMRRSL*MSWATS
Trigger: GGAGGTGGCCCAGGACATGCAGAGAGAGCGGCGCAT...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTAGGAAGTCAGGACCTTaGTTCATCTGGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PESGTSGCGSPGRSTFSPRKSGP*FIWLSP
Trigger: CGGGGAGAGCCAGATGAAGCAAGGTCCTGACTTCCT...AGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTCTTGGAAAAAGTTGTaGTGGGCGTGGAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: VAALAIPRPALHLRDEQLSWKKL*WAWKNL
Trigger: CAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA...AAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTCAGGTGTTCCTCTCTaGTCTCAAGCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQESGVPL*SQAAVS
Trigger: GGACACTGCAGCTTGAGAGCAGAGAGGAACACCTGA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp TGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAACTTGGTGCTGGTGGATaGTATAGCCACATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: CSATLTPTPHTRARPLPELGAGG*YSHILS
Trigger: ACTCAGGATGTGGCTATAGCATCCACCAGCACCAAG...TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGATTCTCCGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAA...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCCACACTTCCTTTTCTaGCAGACTCTTCGAATTCCG +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSPHFLF*QTLRIP
Trigger: CGGAATTCGAAGAGTCTGGCAGAAAAGGAAGTGTGG...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CAGGGGTCTCAGGGGCCTCTGAACTCAGGCTGGAGACTTCAGAACGATCTCCACCCACACTTCCTTTTCTaGCAGACTCTTCGAATTCCG +
Preference number: 4 (lower is better)
Translates to: QGSQGPLNSGWRLQNDLHPHFLF*QTLRIP
Trigger: CGGAATTCGAAGAGTCTGGCAGAAAAGGAAGTGTGG...GTGGAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCCCACACTTCCTTTTCTaGCAGACTCTTCGAATTCCG +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAPHFLF*QTLRIP
Trigger: CGGAATTCGAAGAGTCTGGCAGAAAAGGAAGTGTGG...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCCCCGAGGAAGGCGCTaGTCAGGGCTTCGTCCTTGC +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCPRGRR*SGLRPC
Trigger: GCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATAAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDISFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCCGGCGTGCAAACCTATaGTCCACATACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSRRANL*STYLAI
Trigger: TATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCG...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACGGCGTGCAAACCTATaGTCCACATACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTRRANL*STYLAI
Trigger: TATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDERCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCCAGAGCTGTCTCGCCTaGTTCATTTACTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAQSCLA*FIYCAN
Trigger: GTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTG...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR GCA 90 bp GGCATCCAGGTGACCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCAGAGCTGTCTCGCCTaGTTCATTTACTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: GIQVTTVLDDEIHQRQGSQSCLA*FIYCAN
Trigger: GTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTG...GCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGGTCACCTGGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACTCACACTCCTTGTGGTaGTTCTTCCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNSHSLW*FFLAMS
Trigger: GGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGA...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCTCACACTCCTTGTGGTaGTTCTTCCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSSHSLW*FFLAMS
Trigger: GGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGA...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATACTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDILLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTACTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVLLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR GCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAAAGTTGCACAGAACTTaGTGGGAGACTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTKLHRT*WETPSP
Trigger: AGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATAGATGGAGGGCTCTCCTaGCCTTGTGAAGCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIDGGLS*PCEAPR
Trigger: TCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATC...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCTGGCTTAGGTGTATCTaGTTTCTCATTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSWLRCI*FLIGAE
Trigger: CTCAGCCCCAATGAGAAAGCAGATACACCTAAGCCA...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTCTCTGCAGGATGGCTTaGTCTCCTTCCAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPLCRMA*SPSKIS
Trigger: GGAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAG...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGACTCTGCAGGATGGCTTaGTCTCCTTCCAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGLCRMA*SPSKIS
Trigger: GGAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAG...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ATCAGGTTCTTGAAGAGCGCAGCAACCTCGCGGGTGAACACGGCCAAGTTTAGGTCTTCATTCTCCACATaGCCAAGGCCGGAGCTATGG +
Preference number: 4 (lower is better)
Translates to: IRFLKSAATSRVNTAKFRSSFST*PRPELW
Trigger: CCATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGA...CCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTGCGCTCTTCAAGAACCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTLFWDR*LLPKDS
Trigger: GGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAG...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCAGCTTGGCCATTTTaGCTTCATAGTCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAPAWPF*LHSPSM
Trigger: CATGGAAGGACTATGAAGCCAAAATGGCCAAGCTGG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCCCAGCTTGGCCATTTTaGCTTCATAGTCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSPAWPF*LHSPSM
Trigger: CATGGAAGGACTATGAAGCCAAAATGGCCAAGCTGG...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTCCAGCTTGGCCATTTTaGCTTCATAGTCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGPAWPF*LHSPSM
Trigger: CATGGAAGGACTATGAAGCCAAAATGGCCAAGCTGG...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCGCTCCTTCTCCAGCTTaGCCATTTTGGCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSAPSPA*PFWLHS
Trigger: ACTATGAAGCCAAAATGGCCAAGCTGGAGAAGGAGC...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTGCCTGTTCACACATGTGCAGCTaGAAGATGCGCCGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: AWLATLTAKCKTSSSGACSHMCS*KMRRSL
Trigger: GAGAGAGCGGCGCATCTTCCAGCTGCACATGTGTGA...ACAGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAAAGTTGTGCTGGGCGTaGAAGAACTTGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTKLCWA*KNLMRL
Trigger: GAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTT...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGAGCCTTCCAGCCATCTTaGAAAAAGTTGTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGAFQPS*KKLCWA
Trigger: CGCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGC...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGGACGCCCGAGCACTaGATGCAGGTGAGCACGCCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKWTPEH*MQVSTP
Trigger: GGGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGACGCCCAGTTCGCGGTaGACGCCCGAGCACTGGATG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKTPSSR*TPEHWM
Trigger: CATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp ATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCCAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: MKSTRGREAWLATLTAKCQSPAH*QRPPVP
Trigger: CGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG...GCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp TGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: CQSQALWKLPRSSPHVEGRGREA*LATLTA
Trigger: GGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCT...TCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCAAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEARGREA*LATLTA
Trigger: GGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCT...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp CTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTGCCACTCTAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: LVGDFDSQMQDEFFRCHSRGREA*LATLTA
Trigger: GGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCT...AGAGTGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTTGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPICGASS*LCPELS
Trigger: AGACAGCTCTGGACATAGCCAGGAAGAAGCACCACA...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: HQRQGSLVGDFDSQMQDECGASS*LCPELS
Trigger: AGACAGCTCTGGACATAGCCAGGAAGAAGCACCACA...CTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCTCCTCACACTCCTTGTaGTGCTTCTTCCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMASSHSL*CFFLAM
Trigger: CATAGCCAGGAAGAAGCACCACAAGGAGTGTGAGGA...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp CACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTCCTCACACTCCTTGTaGTGCTTCTTCCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: HQRQGSLVGDFDSQMQDESSHSL*CFFLAM
Trigger: CATAGCCAGGAAGAAGCACCACAAGGAGTGTGAGGA...CTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCTGTCTTGCACACCCTTaGACCAAAGTCCGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMACLAHP*TKVREE
Trigger: CTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACA...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCCAGAACGATCTCCACTaGCATGTCTTGCACACCCTT +
Preference number: 4 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSQNDLH*HVLHTL
Trigger: AAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTG...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCCTCTGAACTCAGGCTaGAGACTTCAGAACGATCTC +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIPLNSG*RLQNDL
Trigger: GAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCCCTCTGAACTCAGGCTaGAGACTTCAGAACGATCTC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAPLNSG*RLQNDL
Trigger: GAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGG...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAAGGGGCTCATCAGACTaGAGGAGGAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVRGSSD*RRRLDC
Trigger: GCAGTCCAGCCTCCTCCTCCAGTCTGATGAGCCCCT...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
CDS-3UTR CCA 90 bp ATGACCTCATTGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCAACAACTCGGAGAGGGGCTCATCAGACTaGAGGAGGAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: MTSLKLVFPMFKASNNSERGSSD*RRRLDC
Trigger: GCAGTCCAGCCTCCTCCTCCAGTCTGATGAGCCCCT...CTCCGAGTTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGTGGGTGGGGCTTGGCTaGGATCCCCAGGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVWVGLG*DPQVPR
Trigger: CCTTGGAACCTGGGGATCCCAGCCAAGCCCCACCCA...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTACTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTATGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTCCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTTCCTTGGTAGAGGCATaGCCTGTGGCAGGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: PESGTSGCGSPGRSTFSPSLVEA*PVAGRR
Trigger: CCTTCTTCCTGCCACAGGCCATGCCTCTACCAAGGA...AGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTCCAGAGCCATGCCCTaGAATCTGACCCTGCCTATT +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQESRAMP*NLTLPI
Trigger: AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCGGACACAGGCAAATGTaGGTGCATCTGACTCTACAA +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSGHRQM*VHLTLQ
Trigger: TTGTAGAGTCAGATGCACCCACATTTGCCTGTGTCC...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGGACACAGGCAAATGTaGGTGCATCTGACTCTACAA +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCGHRQM*VHLTLQ
Trigger: TTGTAGAGTCAGATGCACCCACATTTGCCTGTGTCC...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGAAGCTGTGTTGGCCATTaGTGCTCTCTAGTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGSCVGH*CSLVSP
Trigger: AGGGGAGACTAGAGAGCACCAATGGCCAACACAGCT...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGACAACCCTGTTCCTGTaGGAACCACAGACCAGTCAG +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQETTLFL*EPQTSQ
Trigger: CTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCAATGAAACCAGACACTaGGGGCTCAAAAGACAACCC +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPANETRH*GLKRQP
Trigger: GGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATT...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCCCTCTGAACTCAGGCTaGAGACTTCAGAACGATTCT +
Preference number: 4 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSPLNSG*RLQNDS
Trigger: AGAATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGG...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465372.5
ENST00000635461.1
CDS-3UTR CCA 90 bp AAGCAGCGCTTCTCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAACAGGTGGGTTATAAGTaGCCCTTGGAGGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: KQRFSSSSSSLSEPGSVEQVGYK*PLEGFS
Trigger: TGAGAACCCCTCCAAGGGCCACTTATAACCCACCTG...TTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGAGAAGCGCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGAGGGGAGTAACAGCTaGTCCTGGAGAAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: GREAWLATLTAKCKTSSSEGSNS*SWRRTG
Trigger: CCCAGTTCTTCTCCAGGACCAGCTGTTACTCCCCTC...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp CTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGGAGGGGAGTAACAGCTaGTCCTGGAGAAGAACTGGG +
Preference number: 4 (lower is better)
Translates to: LWKLPRSSPHVEGRQRSPEGSNS*SWRRTG
Trigger: CCCAGTTCTTCTCCAGGACCAGCTGTTACTCCCCTC...CGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
3UTR CAA 72 bp AAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTaGACAGCCAAATGCAAGACGAGTTCTTCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: KSTRGREAWLAT*TAKCKTSSSGA
Trigger: GGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPPASR*RGTGSG
Trigger: CCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp ATCAGGTTCTTGAAGAGCGCAGCAACCTCGCGGGTGAACACGGCCAAGTTTAGGGTTTATCGTGCTGTGTaGGATGGTCAGGCAGCCATA +
Preference number: 4 (lower is better)
Translates to: IRFLKSAATSRVNTAKFRVYRAV*DGQAAI
Trigger: TATGGCTGCCTGACCATCTCACACAGCACGATAAAC...CCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTGCGCTCTTCAAGAACCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGA +
Preference number: 4 (lower is better)
Translates to: LILLTVRARLCGNYPGVVPGWRL*QPNARR
Trigger: TCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGG...GACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp ACCTCATTGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCAACAACTCGGAGGGGCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGA +
Preference number: 4 (lower is better)
Translates to: TSLKLVFPMFKASNNSEGPGWRL*QPNARR
Trigger: TCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGG...CCCCTCCGAGTTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCACATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
CDS-3UTR TCA 90 bp TCTTCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCACATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: SSWLCPELSRLLHLLCQPHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...TGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCAGAGGCTGCCTGGCTaGGGGACCATCTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKQRLPG*GTIFRA
Trigger: AGCCCTGAAGATGGTCCCTCAGCCAGGCAGCCTCTG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp ATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: MKSTRGREAWLATLTAKCETPSP*AISFSD
Trigger: ATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTC...GCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR TCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCGTACAGCATGCATGTTaGCCAGCCAGAATGGATGTG +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTVQHAC*PARMDV
Trigger: CACATCCATTCTGGCTGGTCAACATGCATGCTGTAC...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTAAATGTGGGTGCATCTaGCTCTACAATTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIKCGCI*LYNLAG
Trigger: CCCAGCCAAATTGTAGAGTCAGATGCACCCACATTT...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGAGGCATCCATCAACCCTaGCTATTCCTTTCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGGIHQP*LFLSFL
Trigger: CAGGAAGGAAAGGAATAGTCAGGGTTGATGGATGCC...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGAGACTAAAAGGCTCCTaGGTTGACCAAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVRLKGS*VDQEKE
Trigger: CTCTTTCTCTTGGTCAACTCAGGAGCCTTTTAGTCT...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCAGACTAAAAGGCTCCTaGGTTGACCAAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPARLKGS*VDQEKE
Trigger: CTCTTTCTCTTGGTCAACTCAGGAGCCTTTTAGTCT...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGATGCGCCGCTCTCTCTaGATGTCCTGGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKMRRSL*MSWATS
Trigger: GGAGGTGGCCCAGGACATGCAGAGAGAGCGGCGCAT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCAGGAAGTCAGGACCTTaGTTCATCTGGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSRKSGP*FIWLSP
Trigger: CGGGGAGAGCCAGATGAAGCAAGGTCCTGACTTCCT...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCTCTTGGAAAAAGTTGTaGTGGGCGTGGAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSSWKKL*WAWKNL
Trigger: CAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCTTGGTGCTGGTGGATaGTATAGCCACATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQELGAGG*YSHILS
Trigger: ACTCAGGATGTGGCTATAGCATCCACCAGCACCAAG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGACTTGGTGCTGGTGGATaGTATAGCCACATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGLGAGG*YSHILS
Trigger: ACTCAGGATGTGGCTATAGCATCCACCAGCACCAAG...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp AAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCAGGTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: KVVRPVVGHQVEALFLLRSQTAC*LGAGGC
Trigger: GCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGA...CCTGAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp TCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 4 (lower is better)
Translates to: SWLCPELSRLLHLLCQPKSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...CTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCGGCGTGCAAACCTATaGTCCACATACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHRRANL*STYLAI
Trigger: TATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 4 (lower is better)
Translates to: LWKLPRSSPHVEGRQRSPRCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...CGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp TCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: SSSSSSLSEPGSVEITQETGGPC*KWLSRV
Trigger: GACTCTGGACAGCCATTTGCAACAGGGACCTCCTGT...CTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR GCA 90 bp ATGACCTCATTGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCAACAACTCGGAGGACGAGTTCTTCAGGTaGCTGTGCATCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: MTSLKLVFPMFKASNNSEDEFFR*LCIRPW
Trigger: CCAGGGCCTGATGCACAGGCACCTGAAGAACTCGTC...CTCCGAGTTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCACTTTGACAGCCAAATaGAAGACGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRTLTAK*KTSSSG
Trigger: ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGT...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCTGGTTGTAGAGTGCTaGGTAGTGCAGAGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: LWKLPRSSPHVEGRQRSPLVVEC*VVQSRV
Trigger: AACACGGCTCTGCACTACGCAGCACTCTACAACCAG...CGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCACTGGTTGTAGAGTGCTaGGTAGTGCAGAGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: GREAWLATLTAKCKTSSSLVVEC*VVQSRV
Trigger: AACACGGCTCTGCACTACGCAGCACTCTACAACCAG...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCCTGCTTCATTTACTGTaGCAACCAAAGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMALLHLL*QPKLSP
Trigger: AGGGGAGAGCTTTGGTTGGCACAGTAAATGAAGCAG...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR GCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCCTGCTTCATTTACTGTaGCAACCAAAGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGILLHLL*QPKLSP
Trigger: AGGGGAGAGCTTTGGTTGGCACAGTAAATGAAGCAG...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCAGAGCTGTCTCGCCTaGTTCATTTACTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHQSCLA*FIYCAN
Trigger: GTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCTCCACTGGCATGTCTTaGACACCCTTGGACCAAAGT +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTSTGMS*TPLDQS
Trigger: ACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGA...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCCACTGGCATGTCTTaGACACCCTTGGACCAAAGT +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHSTGMS*TPLDQS
Trigger: ACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTACTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVLLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACAAGTTGCACAGAACTTaGTGGGAGACTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHKLHRT*WETPSP
Trigger: AGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR GCA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCGAACCCTTAAGTCTCTaGCCTCCCAATTCTATTACT +
Preference number: 4 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNREPLSL*PPNSIT
Trigger: AGTAATAGAATTGGGAGGGCAGAGACTTAAGGGTTC...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCTGGCTTAGGTGTATCTaGTTTCTCATTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAWLRCI*FLIGAE
Trigger: CTCAGCCCCAATGAGAAAGCAGATACACCTAAGCCA...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGGGTACCGGGGCATCTTaGCGGCGAAGGCGGCGGCCC +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMGTGAS*RRRRRP
Trigger: GGGCCGCCGCCTTCGCCGCCAAGATGCCCCGGTACC...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTGCCTGTTCTTCATTCTCCACATaGCCAAGGCCGGAGCTATGG +
Preference number: 4 (lower is better)
Translates to: AWLATLTAKCKTSSSGACSSFST*PRPELW
Trigger: CCATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGA...ACAGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCCCAGCTTGGCCATTTTaGCTTCATAGTCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAPAWPF*LHSPSM
Trigger: CATGGAAGGACTATGAAGCCAAAATGGCCAAGCTGG...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCGCTCCTTCTCCAGCTTaGCCATTTTGGCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAAPSPA*PFWLHS
Trigger: ACTATGAAGCCAAAATGGCCAAGCTGGAGAAGGAGC...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTGCTCCTTCTCCAGCTTaGCCATTTTGGCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIAPSPA*PFWLHS
Trigger: ACTATGAAGCCAAAATGGCCAAGCTGGAGAAGGAGC...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSLLSP*PDRAPS
Trigger: AGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTTCACACATGTGCAGCTaGAAGATGCGCCGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPISHMCS*KMRRSL
Trigger: GAGAGAGCGGCGCATCTTCCAGCTGCACATGTGTGA...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTTGGAAAAAGTTGTGCTaGGCGTGGAAGAACTTGATG +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGWKKLC*AWKNLM
Trigger: CATCAAGTTCTTCCACGCCCAGCACAACTTTTTCCA...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp AGCCCACTTTCTCCGTCCCAAACTGCTTGTTGCCTTGGTGCTGGTGGATGCTATGCCTTCCAGCCATCTTaGAAAAAGTTGTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: SPLSPSQTACCLGAGGCYAFQPS*KKLCWA
Trigger: CGCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGC...ATAGCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAAAGTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp ATGACCTCATTGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCAACAACTCGGAGAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: MTSLKLVFPMFKASNNSEKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...CTCCGAGTTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCGCAGTCGCAGCACTaGCTATTCCCAGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPQSQH*LFPGLL
Trigger: GAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCAGGTCCCTGTTGCAAATaGCTGTCCAGAGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAGPCCK*LSRVAE
Trigger: CTCAGCGACTCTGGACAGCCATTTGCAACAGGGACC...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTCAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIQSPAH*QRPPVP
Trigger: CGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp TCTTCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCACAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: SSWLCPELSRLLHLLCQPQSPAH*QRPPVP
Trigger: CGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG...TGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVRGREA*LATLTA
Trigger: GGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCT...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATAAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIRGREA*LATLTA
Trigger: GGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCT...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHCGASS*LCPELS
Trigger: AGACAGCTCTGGACATAGCCAGGAAGAAGCACCACA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCTCCTCACACTCCTTGTaGTGCTTCTTCCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTSSHSL*CFFLAM
Trigger: CATAGCCAGGAAGAAGCACCACAAGGAGTGTGAGGA...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGATCCTCACACTCCTTGTaGTGCTTCTTCCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGSSHSL*CFFLAM
Trigger: CATAGCCAGGAAGAAGCACCACAAGGAGTGTGAGGA...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp ACCTCATTGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCAACAACTCGGAGGGGAGAAGAGTTTTTGACTaGCAAGGGCGGGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: TSLKLVFPMFKASNNSEGRRVFD*QGRGTV
Trigger: GACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCT...CCCCTCCGAGTTGTTGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGCAGAACGATCTCCACTaGCATGTCTTGCACACCCTT +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEQNDLH*HVLHTL
Trigger: AAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTG...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGGGTGGGGCTTGGCTaGGATCCCCAGGTTCCAAGG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKWVGLG*DPQVPR
Trigger: CCTTGGAACCTGGGGATCCCAGCCAAGCCCCACCCA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTAACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATACCCAGCTCTGAACATTaGGGCCTAGCATGGGGCATG +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIPSSEH*GLAWGM
Trigger: CATGCCCCATGCTAGGCCCCAATGTTCAGAGCTGGG...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATACTAGTCTCCCCTGCTTaGCTTGGCCCATTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDILVSPA*LGPFLP
Trigger: TGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAG...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAAATGAAACCAGACACTaGGGGCTCAAAAGACAACCC +
Preference number: 4 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTNETRH*GLKRQP
Trigger: GGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATT...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGA +
Preference number: 4 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRPGWRL*QPNARR
Trigger: TCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGG...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCTTCAGCAGCAGCTTaGGGCAGTCGGGCTGGTTGT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPSAAA*GSRAGC
Trigger: ACAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGTCTCAGGGGCCTCTaGACTCAGGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGLRGL*TQAGDF
Trigger: GAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
CDS-3UTR TCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCAGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAETPSP*AISFSD
Trigger: ATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTC...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACAGACTAAAAGGCTCCTaGGTTGACCAAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNRLKGS*VDQEKE
Trigger: CTCTTTCTCTTGGTCAACTCAGGAGCCTTTTAGTCT...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATAACAAGTCTGAGATaGATGAAACCAGACACTGGG +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGITSLR*MKPDTG
Trigger: CCCAGTGTCTGGTTTCATTCATCTCAGACTTGTTAT...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp TGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGATGCCACTCTGATGGGTaGGATCTGAGCAGATGTCAG +
Preference number: 4 (lower is better)
Translates to: CQSQALWKLPRSSPHVEGCHSDG*DLSRCQ
Trigger: CTGACATCTGCTCAGATCTCACCCATCAGAGTGGCA...TCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR GCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCAGCCGGAGCTATGGATTaGCCGCACAGCCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAAGAMD*PHSLLY
Trigger: ATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGC...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635693.1
CDS-3UTR GCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCGCCGGAGCTATGGATTaGCCGCACAGCCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSAGAMD*PHSLLY
Trigger: ATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGC...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR GCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCAACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEATASRY*SSFSTW
Trigger: CCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGT...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635693.1
CDS-3UTR GCA 90 bp GGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: GYVQSCLACFIYCANQSSTASRY*SSFSTW
Trigger: CCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGT...AGAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRTASRY*SSFSTW
Trigger: CCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGT...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCGACCGTCCCTCAGCTaGCCCTTCATCAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKRPSLS*PFIRLS
Trigger: GGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR GCA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGTCTCTGCTCTCAAGCTaGAGTGTCCCTCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVSLLSS*SVPRRE
Trigger: CTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGA...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCAGGTGTTCCTCTCTaGTCTCAAGCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRSGVPL*SQAAVS
Trigger: GGACACTGCAGCTTGAGAGCAGAGAGGAACACCTGA...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: GYVQSCLACFIYCANQSSSQTAC*LGAGGC
Trigger: GCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGA...AGAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCTTCTCCGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAA...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp CCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTTCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACA +
Preference number: 4 (lower is better)
Translates to: PESGTSGCGSPGRSTFSPSGLRP*CSATLT
Trigger: TGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGA...AGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR GCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTTCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACA +
Preference number: 4 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSSGLRP*CSATLT
Trigger: TGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGA...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGCTTTGTGAGGTCGTaGGGCTCCCCATCATGGCCG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSFVRS*GSPSWP
Trigger: CGGCCATGATGGGGAGCCGCACGACCTCACAAAGCT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIRCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp CTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTGCCACTCTAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 4 (lower is better)
Translates to: LVGDFDSQMQDEFFRCHSRCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...AGAGTGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTTCTTCAGGTGCCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKFFRCL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGCACCTGAAGAA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCACTTTGACAGCCAAATaGAAGACGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTATLTAK*KTSSSG
Trigger: ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGT...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGACTTTGACAGCCAAATaGAAGACGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVTLTAK*KTSSSG
Trigger: ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGT...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVGLVVE*CVVQSR
Trigger: ACGGCTCTGCACTACGCAGCACTCTACAACCAGCCC...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCTGCTTCATTTACTGTaGCAACCAAAGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQELLHLL*QPKLSP
Trigger: AGGGGAGAGCTTTGGTTGGCACAGTAAATGAAGCAG...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp TCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGCAGAGCTGTCTCGCCTaGTTCATTTACTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SSSSSSLSEPGSVEITQEQSCLA*FIYCAN
Trigger: GTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTG...CTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCAGAGCTGTCTCGCCTaGTTCATTTACTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSQSCLA*FIYCAN
Trigger: GTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTG...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp CTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCTCCACTGGCATGTCTTaGACACCCTTGGACCAAAGT +
Preference number: 4 (lower is better)
Translates to: LKVVRPVVGHQVEALFLLSTGMS*TPLDQS
Trigger: ACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGA...GAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR GCA 90 bp GGCCAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCAAGTTGCACAGAACTTaGTGGGAGACTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GQQGASLAKVAQNLLGDSKLHRT*WETPSP
Trigger: AGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT...GGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR GCA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGCCAAAGGACCACCCCTaGAGGGCCCTTGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVPKDHP*RALVLL
Trigger: GAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGG...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCGAACCCTTAAGTCTCTaGCCTCCCAATTCTATTACT +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTAEPLSL*PPNSIT
Trigger: AGTAATAGAATTGGGAGGGCAGAGACTTAAGGGTTC...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTGGCTTAGGTGTATCTaGTTTCTCATTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEWLRCI*FLIGAE
Trigger: CTCAGCCCCAATGAGAAAGCAGATACACCTAAGCCA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGATGGCTTAGGTGTATCTaGTTTCTCATTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGWLRCI*FLIGAE
Trigger: CTCAGCCCCAATGAGAAAGCAGATACACCTAAGCCA...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTTGTGTTGGCCATTGGTaGTCTCTAGTCTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPICVGHW*SLVSPA
Trigger: AGCAGGGGAGACTAGAGAGCACCAATGGCCAACACA...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPRPEL*IARTAF
Trigger: GAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATCTTCATTCTCCACATaGCCAAGGCCGGAGCTATGG +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEASSFST*PRPELW
Trigger: CCATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGA...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: REAWLATLTAKCKTSSSGLFWDR*LLPKDS
Trigger: GGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAG...ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSLFWDR*LLPKDS
Trigger: GGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAG...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCTCTCTGCATGTCCTaGGCCACCTCCCCAGGGATC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSLCMS*ATSPGI
Trigger: GATCCCTGGGGAGGTGGCCCAGGACATGCAGAGAGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGGAAAAAGTTGTGCTaGGCGTGGAAGAACTTGATG +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGIWKKLC*AWKNLM
Trigger: CATCAAGTTCTTCCACGCCCAGCACAACTTTTTCCA...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCGCCTTCCAGCCATCTTaGAAAAAGTTGTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSAFQPS*KKLCWA
Trigger: CGCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGC...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGGGAGTCCCGGAGCTaGGTCAGCTTCTGTAGCTCG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKRESRS*VSFCSS
Trigger: CGAGCTACAGAAGCTGACCCAGCTCCGGGACTCCCT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTACCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGGTCCCTGTTGCAAATaGCTGTCCAGAGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVGPCCK*LSRVAE
Trigger: CTCAGCGACTCTGGACAGCCATTTGCAACAGGGACC...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATACAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIQSPAH*QRPPVP
Trigger: CGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp ATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: MKSTRGREAWLATLTAKCQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...GCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp CTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LWKLPRSSPHVEGRQRSPQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...CGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTATGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGGGGCTCATCAGACTaGAGGAGGAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKRGSSD*RRRLDC
Trigger: GCAGTCCAGCCTCCTCCTCCAGTCTGATGAGCCCCT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGCCCTCTTCAGAGTTaGGTGGGGCTTGGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGPLQS*VGLGWD
Trigger: ATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGACATCTCCGAAGGGGTaGTCCCGGATGTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKTSPKG*SRMSGW
Trigger: CCAGCCTGACATCCGGGACCACCCCTTCGGAGATGT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGGGCAGAGGCTGCCTaGCTGAGGGACCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKWAEAA*LRDHLQ
Trigger: CTGAAGATGGTCCCTCAGCCAGGCAGCCTCTGCCCA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTAGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCAGACTAATAAATGGCTaGCTGAGAAGACAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTARLING*LRRQSL
Trigger: TAGGGACTGTCTTCTCAGCCAGCCATTTATTAGTCT...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCAGACTAATAAATGGCTaGCTGAGAAGACAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSRLING*LRRQSL
Trigger: TAGGGACTGTCTTCTCAGCCAGCCATTTATTAGTCT...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTCTTGTCTTACTCGTGTaGTATCTGAAGTGCCTAACA +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGLVLLV*YLKCLT
Trigger: TGTTAGGCACTTCAGATACCACACGAGTAAGACAAG...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGAAATGAAACCAGACACTaGGGGCTCAAAAGACAACCC +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGNETRH*GLKRQP
Trigger: GGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATT...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCAATGAAACCAGACACTaGGGGCTCAAAAGACAACCC +
Preference number: 4 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTNETRH*GLKRQP
Trigger: GGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATT...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGAATGAAACCAGACACTaGGGGCTCAAAAGACAACCC +
Preference number: 4 (lower is better)
Translates to: CPCEAPRLTGEIESRSDENETRH*GLKRQP
Trigger: GGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATT...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGGTTATAAGTGGCCCTTaGAGGGGTTCTCACCTGTGC +
Preference number: 4 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRVISGP*RGSHLC
Trigger: GCACAGGTGAGAACCCCTCCAAGGGCCACTTATAAC...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCATGTTCAAGGCCAGCTaGAGTCGTAGGAAAATAGAC +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGIMFKAS*SRRKID
Trigger: GTCTATTTTCCTACGACTCCAGCTGGCCTTGAACAT...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000495646.5
ENST00000634513.1
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCATGTTCAAGGCCAGCTaGAGTCGTAGGAAAATAGAC +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAMFKAS*SRRKID
Trigger: GTCTATTTTCCTACGACTCCAGCTGGCCTTGAACAT...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000495646.5
ENST00000634513.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCAGCAACCTCGCGGGTaGACACGGCCAAGTTTAGGA +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKQQPRG*TRPSLG
Trigger: TCCTAAACTTGGCCGTGTTCACCCGCGAGGTTGCTG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR TCA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTATGTTGTTCAAGTTCTaGATCAGGTTCTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCMLFKF*IRFLKS
Trigger: GCTCTTCAAGAACCTGATTCAGAACTTGAACAACAT...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATGTTGTTCAAGTTCTaGATCAGGTTCTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGMLFKF*IRFLKS
Trigger: GCTCTTCAAGAACCTGATTCAGAACTTGAACAACAT...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCGTCCTCCTGGGCCTaGTGGAGTGCATGTACTGAG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSSSWA*WSACTE
Trigger: CTCAGTACATGCACTCCATCAGGCCCAGGAGGACGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTAGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVAIATS*VLPAQV
Trigger: CACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGC...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGCTCGTCCTCTGCCTaGAAGTGGTACGTCCGGTTG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKCSSSA*KWYVRL
Trigger: CAACCGGACGTACCACTTTCAGGCAGAGGACGAGCA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCAGGTCCAAGGTGAGTaGCTGCATGCGCGAAAAGCG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKQVQGE*LHARKA
Trigger: CGCTTTTCGCGCATGCAGTCACTCACCTTGGACCTG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCAGCAGGTCCAAGGTaGGTGACTGCATGCGCGAAA +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPAGPR*VTACAK
Trigger: TTTCGCGCATGCAGTCACTCACCTTGGACCTGCTGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCCGAGAAGAGTTTTTaGCTGGCAAGGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSEKSF*LARAGD
Trigger: GTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCSHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVETPSP*AISFSD
Trigger: ATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTC...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTACTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GGCCAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCAAATGTGGGTGCATCTaGCTCTACAATTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GQQGASLAKVAQNLLGDSKCGCI*LYNLAG
Trigger: CCCAGCCAAATTGTAGAGTCAGATGCACCCACATTT...GGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618240.4
ENST00000635693.1
CDS-3UTR TCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCATAACAAGTCTGAGATaGATGAAACCAGACACTGGG +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMAITSLR*MKPDTG
Trigger: CCCAGTGTCTGGTTTCATTCATCTCAGACTTGTTAT...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTATAACAAGTCTGAGATaGATGAAACCAGACACTGGG +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIITSLR*MKPDTG
Trigger: CCCAGTGTCTGGTTTCATTCATCTCAGACTTGTTAT...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGTGGC*LRIPRP
Trigger: AGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR GCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTGGGACAGGTGGCTGTTaGCTAAGGATTCCACGGCCT +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCGTGGC*LRIPRP
Trigger: AGGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCC...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTCTTGGAAAAAGTTGTaGTGGGCGTGGAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQESWKKL*WAWKNL
Trigger: CAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCTCTGCTCTCAAGCTaGAGTGTCCCTCGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSLLSS*SVPRRE
Trigger: CTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTCGTGCTCGTCCTCTaGCTGAAAGTGGTACGTCCG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLVLVL*LKVVRP
Trigger: CGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGTAGTCCCTGCGGGTaGCCATGTCACTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKCSPCG*PCHSQL
Trigger: CAGCTGAGAGTGACATGGGCACCCGCAGGGACTACA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp TGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCCGGCGTGCAAACCTATaGTCCACATACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: WLCPELSRLLHLLCQPKLRRANL*STYLAI
Trigger: TATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCG...GAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGCPKS*PLAKAS
Trigger: GGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGACGAGTTCTTCAGGTaGCTGTGCATCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKDEFFR*LCIRPW
Trigger: CCAGGGCCTGATGCACAGGCACCTGAAGAACTCGTC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCACTTTGACAGCCAAATaGAAGACGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGITLTAK*KTSSSG
Trigger: ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGT...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGLVVE*CVVQSR
Trigger: ACGGCTCTGCACTACGCAGCACTCTACAACCAGCCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAGGGCTGGTTGTAGAGTaGTGCGTAGTGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: QANVGASDSTIWLGNIGEGLVVE*CVVQSR
Trigger: ACGGCTCTGCACTACGCAGCACTCTACAACCAGCCC...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp TCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGCTGCTTCATTTACTGTaGCAACCAAAGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SSSSSSLSEPGSVEITQELLHLL*QPKLSP
Trigger: AGGGGAGAGCTTTGGTTGGCACAGTAAATGAAGCAG...CTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp CTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCTGCTTCATTTACTGTaGCAACCAAAGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LWKLPRSSPHVEGRQRSPLLHLL*QPKLSP
Trigger: AGGGGAGAGCTTTGGTTGGCACAGTAAATGAAGCAG...CGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCACACTCCTTGTGGTaGTTCTTCCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRSHSLW*FFLAMS
Trigger: GGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGA...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCCAGTCCTTGAGCAAGTTGCACAGAACTTaGTGGGAGACTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: ASLAKVAQNLLGDSQSLSKLHRT*WETPSP
Trigger: AGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT...GCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR GCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTGAACCCTTAAGTCTCTaGCCTCCCAATTCTATTACT +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIEPLSL*PPNSIT
Trigger: AGTAATAGAATTGGGAGGGCAGAGACTTAAGGGTTC...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTACTCTCTAGTCTCCCCTaGTTGGCTTGGCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVLSSLP*LAWPIP
Trigger: AGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAG...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTATGTGTTGGCCATTGGTaGTCTCTAGTCTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVCVGHW*SLVSPA
Trigger: AGCAGGGGAGACTAGAGAGCACCAATGGCCAACACA...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTATCTTCATTCTCCACATaGCCAAGGCCGGAGCTATGG +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVSSFST*PRPELW
Trigger: CCATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGA...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CCA 90 bp TGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCAAGTTGTGCTGGGCGTaGAAGAACTTGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: WLCPELSRLLHLLCQPKLKLCWA*KNLMRL
Trigger: GAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTT...GAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATCT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKKGNRL*AAFQPS
Trigger: AGATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGGTACGTCCGGTTGTaGGTCACCAGGTCGAAGCAC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKWYVRL*VTRSKH
Trigger: GTGCTTCGACCTGGTGACCCACAACCGGACGTACCA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCGTGTGAGGGTAGCTaGGCCTCCATGACCTCATTG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPCEGS*ASMTSL
Trigger: CAATGAGGTCATGGAGGCCCAGCTACCCTCACACGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGAGGCAGGGAAGCCTaGTTGGCGACTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKRGREA*LATLTA
Trigger: GGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp CTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTGCCACTCTTCCTCACACTCCTTGTaGTGCTTCTTCCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: LVGDFDSQMQDEFFRCHSSSHSL*CFFLAM
Trigger: CATAGCCAGGAAGAAGCACCACAAGGAGTGTGAGGA...AGAGTGGCACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATCCTCACACTCCTTGTaGTGCTTCTTCCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEASSHSL*CFFLAM
Trigger: CATAGCCAGGAAGAAGCACCACAAGGAGTGTGAGGA...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCACAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGGCTGCTCCCAGGCTaGCGACAGTCTCATAGGTCT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKWLLPG*RQSHRS
Trigger: AGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
CDS-3UTR CCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTTGTCTTGCACACCCTTaGACCAAAGTCCGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPICLAHP*TKVREE
Trigger: CTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACA...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCAGACTAATAAATGGCTaGCTGAGAAGACAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: TAISPNRERPCVLGRGMARLING*LRRQSL
Trigger: TAGGGACTGTCTTCTCAGCCAGCCATTTATTAGTCT...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTCTTGTCTTACTCGTGTaGTATCTGAAGTGCCTAACA +
Preference number: 4 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPILVLLV*YLKCLT
Trigger: TGTTAGGCACTTCAGATACCACACGAGTAAGACAAG...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTTCTGACTCTACAATTTaGCTGGGGAATATAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGSDSTI*LGNIGE
Trigger: TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCTCTGACTCTACAATTTaGCTGGGGAATATAGGAGAA +
Preference number: 4 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSSDSTI*LGNIGE
Trigger: TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CAA 72 bp TGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTaGGCGACTTTGACAGCCAAATGCAAGACGAGTTCT +
Preference number: 4 (lower is better)
Translates to: WMMKSTRGREAW*ATLTAKCKTSS
Trigger: AGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
3UTR CAA 72 bp GGCTGGAGACTTCAGAACGATCTCCACTGGCATGTCTaGCACACCCTTGGACCAAAGTCCGAGAAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: GWRLQNDLHWHV*HTLGPKSEKSF
Trigger: AAAACTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTGAAGTCTCCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
3UTR CAA 72 bp CAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTaGCTGGGAGACTCCCAGTCCTTGAGCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: QQGASLAKVAQN*LGDSQSLSHLL
Trigger: AAGGAGATGGCTCAAGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR TCA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGATGTTGTTCAAGTTCTaGATCAGGTTCTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLMLFKF*IRFLKS
Trigger: GCTCTTCAAGAACCTGATTCAGAACTTGAACAACAT...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGCTCTCCCCGGCTTTaGGCAGATACTCACACATGT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGSPRL*ADTHTC
Trigger: ACATGTGTGAGTATCTGCTCAAAGCCGGGGAGAGCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTGGCTCTCCCCGGCTTTaGGCAGATACTCACACATGT +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCGSPRL*ADTHTC
Trigger: ACATGTGTGAGTATCTGCTCAAAGCCGGGGAGAGCC...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGATGGAGTGCATGTACTaGGGCCGCCAGCTTCTCGAT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKMECMY*GRQLLD
Trigger: ATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCAT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCAIATS*VLPAQV
Trigger: CACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGC...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGCTATAGCCACATCCTaGGTTCTTCCGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKAIATS*VLPAQV
Trigger: CACCTGAGCCGGAAGAACTCAGGATGTGGCTATAGC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTTCAGGCAGCCATACTTaGCTCCACACTTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPISGSHT*LHTSFS
Trigger: AGAAAAGGAAGTGTGGAGTCAAGTATGGCTGCCTGA...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp TCTTCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCATCAGGCAGCCATACTTaGCTCCACACTTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SSWLCPELSRLLHLLCQPSGSHT*LHTSFS
Trigger: AGAAAAGGAAGTGTGGAGTCAAGTATGGCTGCCTGA...TGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
CDS-3UTR TCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAACTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: QANVGASDSTIWLGNIGELKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTCAAGTCCCAGCTCTaGACATTGGGGCCTAGCATG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLKSQL*TLGPSM
Trigger: CATGCTAGGCCCCAATGTTCAGAGCTGGGACTTGAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGTACAGCATGCATGTTaGCCAGCCAGAATGGATGTG +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVVQHAC*PARMDV
Trigger: CACATCCATTCTGGCTGGTCAACATGCATGCTGTAC...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGAATAACAAGTCTGAGATaGATGAAACCAGACACTGGG +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGITSLR*MKPDTG
Trigger: CCCAGTGTCTGGTTTCATTCATCTCAGACTTGTTAT...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGGAAGTCAGGACCTTaGTTCATCTGGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKRKSGP*FIWLSP
Trigger: CGGGGAGAGCCAGATGAAGCAAGGTCCTGACTTCCT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAAGGAAGTCAGGACCTTaGTTCATCTGGCTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: QANVGASDSTIWLGNIGERKSGP*FIWLSP
Trigger: CGGGGAGAGCCAGATGAAGCAAGGTCCTGACTTCCT...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp GGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTCTGCTTCATTTACTGTaGCAACCAAAGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: GYVQSCLACFIYCANQSSLLHLL*QPKLSP
Trigger: AGGGGAGAGCTTTGGTTGGCACAGTAAATGAAGCAG...AGAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGGTCCCCGCCTGGGCCTaGTCCAGCAGCTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQVPAWA*SSSSSH
Trigger: GTGTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGAC...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTATCCACTGGCATGTCTTaGACACCCTTGGACCAAAGT +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVSTGMS*TPLDQS
Trigger: ACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGA...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR GCA 90 bp TCAGCTGCCCCTTCATCAGACTGTCCAGGGGGAAAGAGACAATGTTGTTCAAGTAAGTTGCACAGAACTTaGTGGGAGACTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SAAPSSDCPGGKRQCCSSKLHRT*WETPSP
Trigger: AGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT...ACTTGAACAACATTGTCTCTTTCCCCCTGGACAGTCTGATGAAGGGGCAGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGAACCCTTAAGTCTCTaGCCTCCCAATTCTATTACT +
Preference number: 4 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPEPLSL*PPNSIT
Trigger: AGTAATAGAATTGGGAGGGCAGAGACTTAAGGGTTC...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGAGAACCCTTAAGTCTCTaGCCTCCCAATTCTATTACT +
Preference number: 4 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGEPLSL*PPNSIT
Trigger: AGTAATAGAATTGGGAGGGCAGAGACTTAAGGGTTC...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTTGGCTTAGGTGTATCTaGTTTCTCATTGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: RYKPAESRAMPWNLTLPIWLRCI*FLIGAE
Trigger: CTCAGCCCCAATGAGAAAGCAGATACACCTAAGCCA...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGGGCTTGGCCCATTCCTaGCAGGGCCCAGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQGLAHS*QGPAPS
Trigger: GCTGGGTGCTGGGCCCTGGCAGGAATGGGCCAAGCC...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGCTCTGCAGGATGGCTTaGTCTCCTTCCAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVLCRMA*SPSKIS
Trigger: GGAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAG...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AAAGTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTGAAGGAAGTCAGGACCGCTCCTTCTCCAGCTTaGCCATTTTGGCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: KVVLGVEELDEALKEVRTAPSPA*PFWLHS
Trigger: ACTATGAAGCCAAAATGGCCAAGCTGGAGAAGGAGC...GGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCACACATGTGCAGCTaGAAGATGCGCCGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSHMCS*KMRRSL
Trigger: GAGAGAGCGGCGCATCTTCCAGCTGCACATGTGTGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCAGGTGGAAAAAGTTGTGCTaGGCGTGGAAGAACTTGATG +
Preference number: 4 (lower is better)
Translates to: KVVRPVVGHQVEALFLLRWKKLC*AWKNLM
Trigger: CATCAAGTTCTTCCACGCCCAGCACAACTTTTTCCA...CCTGAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGTCCCTGTTGCAAATaGCTGTCCAGAGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGPCCK*LSRVAE
Trigger: CTCAGCGACTCTGGACAGCCATTTGCAACAGGGACC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAGGTCCCTGTTGCAAATaGCTGTCCAGAGTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: QANVGASDSTIWLGNIGEGPCCK*LSRVAE
Trigger: CTCAGCGACTCTGGACAGCCATTTGCAACAGGGACC...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCAAAGTCCTGCCCATTaGCAAAGGCCTCCAGTACCG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKQSPAH*QRPPVP
Trigger: CGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGGCAAAGGTCCCCGCCTaGGCCTGCTCCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQAKVPA*ACSSSS
Trigger: GGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGC...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTCTGACTCTACAATTTaGCTGGGGAATATAGGAGAA +
Preference number: 4 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGISDSTI*LGNIGE
Trigger: TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGACAACCCTGTTCCTGTaGGAACCACAGACCAGTCAG +
Preference number: 4 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVTTLFL*EPQTSQ
Trigger: CTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTAGTAACAGCTGGTCCTaGAGAAGAACTGGGGAATAT +
Preference number: 4 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSSNSWS*RRTGEY
Trigger: ATATTCCCCAGTTCTTCTCCAGGACCAGCTGTTACT...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR TCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTTCTGAATCAGGTTCTTaGAGAGCGCAGCAACCTCGC +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCSESGS*RAQQPR
Trigger: GCGAGGTTGCTGCGCTCTTCAAGAACCTGATTCAGA...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGA +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPGWRL*QPNARR
Trigger: TCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCCTGGTTGGCGACTTTaGCAGCCAAATGCAAGACGA +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCPGWRL*QPNARR
Trigger: TCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKETPSP*AISFSD
Trigger: ATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR TCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATAAAATGTGGGTGCATCTaGCTCTACAATTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIKCGCI*LYNLAG
Trigger: CCCAGCCAAATTGTAGAGTCAGATGCACCCACATTT...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGCCTTCTTTATTCTCTaGAGGATGGCTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVAFFIL*RMAWSP
Trigger: AGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGC...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635693.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGCCGGAGCTATGGATTaGCCGCACAGCCTTCTTTAT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKAGAMD*PHSLLY
Trigger: ATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKTASRY*SSFSTW
Trigger: CCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR GCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAACGGCCTCTCGGTACTaGTCTTCATTCTCCACATGG +
Preference number: 4 (lower is better)
Translates to: QANVGASDSTIWLGNIGETASRY*SSFSTW
Trigger: CCATGTGGAGAATGAAGAGCAGTACCGAGAGGCCGT...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCAGGTGTTCCTCTCTaGTCTCAAGCTGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSGVPL*SQAAVS
Trigger: GGACACTGCAGCTTGAGAGCAGAGAGGAACACCTGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCSQTAC*LGAGGC
Trigger: GCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGA...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSQTAC*LGAGGC
Trigger: GCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTTCTCCGTCCCAAACTaGTTGTTGCCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKFSVPN*LLPWCW
Trigger: CCAGCACCAAGGCAACAAGCAGTTTGGGACGGAGAA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGGTGTGCACCGGCGTaGAAACCTATGCTCCACATA +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKRCAPA*KPMLHI
Trigger: TATGTGGAGCATAGGTTTGCACGCCGGTGCACACCT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKTGGPC*KWLSRV
Trigger: GACTCTGGACAGCCATTTGCAACAGGGACCTCCTGT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp CTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCACTTTGACAGCCAAATaGAAGACGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LILLTVRARLCGNYPGVVTLTAK*KTSSSG
Trigger: ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGT...GACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTGGTTGTAGAGTGCTaGGTAGTGCAGAGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLVVEC*VVQSRV
Trigger: AACACGGCTCTGCACTACGCAGCACTCTACAACCAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp TCAGCTGCCCCTTCATCAGACTGTCCAGGGGGAAAGAGACAATGTTGTTCAAGTCTGCTTCATTTACTGTaGCAACCAAAGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: SAAPSSDCPGGKRQCCSSLLHLL*QPKLSP
Trigger: AGGGGAGAGCTTTGGTTGGCACAGTAAATGAAGCAG...ACTTGAACAACATTGTCTCTTTCCCCCTGGACAGTCTGATGAAGGGGCAGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTCTGCAGGATGGCTTaGTCTCCTTCCAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLCRMA*SPSKIS
Trigger: GGAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000618240.4
ENST00000634561.2
ENST00000635198.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCTTCATTCTCCACATaGCCAAGGCCGGAGCTATGG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSSFST*PRPELW
Trigger: CCATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLFWDR*LLPKDS
Trigger: GGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAACTGTTCTGGGACAGGTaGCTGTTGCCTAAGGATTCC +
Preference number: 4 (lower is better)
Translates to: QANVGASDSTIWLGNIGELFWDR*LLPKDS
Trigger: GGAATCCTTAGGCAACAGCCACCTGTCCCAGAACAG...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGAAGTTGTGCTGGGCGTaGAAGAACTTGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVKLCWA*KNLMRL
Trigger: GAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTT...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp GGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTTGGAAAAAGTTGTGCTaGGCGTGGAAGAACTTGATG +
Preference number: 4 (lower is better)
Translates to: GYVQSCLACFIYCANQSSWKKLC*AWKNLM
Trigger: CATCAAGTTCTTCCACGCCCAGCACAACTTTTTCCA...AGAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGCCTTCCAGCCATCTTaGAAAAAGTTGTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKAFQPS*KKLCWA
Trigger: CGCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTATCCTCACACTCCTTGTaGTGCTTCTTCCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVSSHSL*CFFLAM
Trigger: CATAGCCAGGAAGAAGCACCACAAGGAGTGTGAGGA...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGAAGAGTTTTTGACTaGCAAGGGCGGGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKRRVFD*QGRGTV
Trigger: GACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAAGAAGAGTTTTTGACTaGCAAGGGCGGGGGACAGTC +
Preference number: 4 (lower is better)
Translates to: QANVGASDSTIWLGNIGERRVFD*QGRGTV
Trigger: GACTGTCCCCCGCCCTTGCCAGTCAAAAACTCTTCT...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGTGTCTTGCACACCCTTaGACCAAAGTCCGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVCLAHP*TKVREE
Trigger: CTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACA...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTATGTCAGGCTGGGTCTaGAGGTGCCTGGGGGCTCTC +
Preference number: 4 (lower is better)
Translates to: YFYLTASTACMLTSQNGCMSGWV*RCLGAL
Trigger: GAGAGCCCCCAGGCACCTCCAGACCCAGCCTGACAT...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCGGCACGTTCCTTCTaGGCAGAGGCTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQPARSF*AEAAWL
Trigger: CAGCCAGGCAGCCTCTGCCCAGAAGGAACGTGCCGG...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACCATTGGGGCCTAGCATaGGGCATGTGGGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNHWGLA*GMWGPA
Trigger: TGCTGGCCCCCACATGCCCCATGCTAGGCCCCAATG...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATCCAGAGCCATGCCCTaGAATCTGACCCTGCCTATT +
Preference number: 4 (lower is better)
Translates to: QANVGASDSTIWLGNIGESRAMP*NLTLPI
Trigger: AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGA...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATAGGACACAGGCAAATGTaGGTGCATCTGACTCTACAA +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIGHRQM*VHLTLQ
Trigger: TTGTAGAGTCAGATGCACCCACATTTGCCTGTGTCC...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CAA 72 bp TTCAGAACGATCTCCACTGGCATGTCTTGCACACCCTaGGACCAAAGTCCGAGAAGAGTTTTTGACTGGCAA +
Preference number: 4 (lower is better)
Translates to: FRTISTGMSCTP*DQSPRRVFDWQ
Trigger: TTGCCAGTCAAAAACTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp CTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCATGTTGTTCAAGTTCTaGATCAGGTTCTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LILLTVRARLCGNYPGVVMLFKF*IRFLKS
Trigger: GCTCTTCAAGAACCTGATTCAGAACTTGAACAACAT...GACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGTTTATCGTGCTGTGTaGGATGGTCAGGCAGCCATA +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKVYRAV*DGQAAI
Trigger: TATGGCTGCCTGACCATCTCACACAGCACGATAAAC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACCATGTCACTCTCAGCTaGGGGTTTAGGGCCGCCGTG +
Preference number: 4 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNHVTLS*GFRAAV
Trigger: CACGGCGGCCCTAAACCCTCAGCTGAGAGTGACATG...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTGGTCTCAGGGGCCTCTaGACTCAGGCTGGAGACTTC +
Preference number: 4 (lower is better)
Translates to: YFYLTASTACMLTSQNGCGLRGL*TQAGDF
Trigger: GAAGTCTCCAGCCTGAGTTCAGAGGCCCCTGAGACC...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTGTACAGCATGCATGTTaGCCAGCCAGAATGGATGTG +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCVQHAC*PARMDV
Trigger: CACATCCATTCTGGCTGGTCAACATGCATGCTGTAC...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAAGACTAAAAGGCTCCTaGGTTGACCAAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVRLKGS*VDQEKE
Trigger: CTCTTTCTCTTGGTCAACTCAGGAGCCTTTTAGTCT...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGGCCTTCTTTATTCTCTaGAGGATGGCTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVAFFIL*RMAWSP
Trigger: AGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGC...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGCGACCGTCCCTCAGCTaGCCCTTCATCAGACTGTCC +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMRPSLS*PFIRLS
Trigger: GGACAGTCTGATGAAGGGGCAGCTGAGGGACGGTCG...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTTGGTGCTGGTGGATaGTATAGCCACATCCTGAGT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLGAGG*YSHILS
Trigger: ACTCAGGATGTGGCTATAGCATCCACCAGCACCAAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACA +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSGLRP*CSATLT
Trigger: TGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCGGCGTGCAAACCTATaGTCCACATACTTGGCCATA +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKRRANL*STYLAI
Trigger: TATGGCCAAGTATGTGGAGCATAGGTTTGCACGCCG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTTCTTCAGGTGCCTGTaGATCAGGCCCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMFFRCL*IRPWQR
Trigger: CCGCTGCCAGGGCCTGATGCACAGGCACCTGAAGAA...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCAACTTTGACAGCCAAATaGAAGACGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEATLTAK*KTSSSG
Trigger: ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGT...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR GCA 90 bp TGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAACTTTGACAGCCAAATaGAAGACGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: CQSQALWKLPRSSPHVEGTLTAK*KTSSSG
Trigger: ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGT...TCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCAGAGCTGTCTCGCCTaGTTCATTTACTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKQSCLA*FIYCAN
Trigger: GTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCACACTCCTTGTGGTaGTTCTTCCTGGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSHSLW*FFLAMS
Trigger: GGACATAGCCAGGAAGAAGCACCACAAGGAGTGTGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCCACTGGCATGTCTTaGACACCCTTGGACCAAAGT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSTGMS*TPLDQS
Trigger: ACTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACCTTCTGGGCAGAGGCTaGCTGGCTGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNLLGRG*LAEGPS
Trigger: AGATGGTCCCTCAGCCAGGCAGCCTCTGCCCAGAAG...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAAGTTGCACAGAACTTaGTGGGAGACTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKKLHRT*WETPSP
Trigger: AGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTCTCTCTGCATGTCCTaGGCCACCTCCCCAGGGATC +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMSLCMS*ATSPGI
Trigger: GATCCCTGGGGAGGTGGCCCAGGACATGCAGAGAGA...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAAGTTGTGCTGGGCGTaGAAGAACTTGATGAGGCTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKKLCWA*KNLMRL
Trigger: GAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTTCCCGTCAGCAGCCTTaGCATCCAGGTGACCACCGT +
Preference number: 4 (lower is better)
Translates to: YFYLTASTACMLTSQNGCSRQQP*HPGDHR
Trigger: ACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGA...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QANVGASDSTIWLGNIGECGASS*LCPELS
Trigger: AGACAGCTCTGGACATAGCCAGGAAGAAGCACCACA...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKCGASS*LCPELS
Trigger: AGACAGCTCTGGACATAGCCAGGAAGAAGCACCACA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCCTCACACTCCTTGTaGTGCTTCTTCCTGGCTATG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSSHSL*CFFLAM
Trigger: CATAGCCAGGAAGAAGCACCACAAGGAGTGTGAGGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
CDS-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTCAGAGCCAGGCTCTGTaGAAATTACCCAGGAGTAGT +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCQSQAL*KLPRSS
Trigger: ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTG...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGTCTTGCACACCCTTaGACCAAAGTCCGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKCLAHP*TKVREE
Trigger: CTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCAGAACGATCTCCACTaGCATGTCTTGCACACCCTT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKQNDLH*HVLHTL
Trigger: AAGGGTGTGCAAGACATGCCAGTGGAGATCGTTCTG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCTCTGAACTCAGGCTaGAGACTTCAGAACGATCTC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPLNSG*RLQNDL
Trigger: GAGATCGTTCTGAAGTCTCCAGCCTGAGTTCAGAGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGAGGGGCTCATCAGACTaGAGGAGGAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMRGSSD*RRRLDC
Trigger: GCAGTCCAGCCTCCTCCTCCAGTCTGATGAGCCCCT...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCC +
Preference number: 4 (lower is better)
Translates to: YFYLTASTACMLTSQNGCLFRVG*GLAGIP
Trigger: GGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAG...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTAATATGTTAGACAGGTaGGTTATAAGTGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: REAWLATLTAKCKTSSSGNMLDR*VISGPW
Trigger: CCAAGGGCCACTTATAACCCACCTGTCTAACATATT...ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCAGGCAGCCATACTTaGCTCCACACTTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSGSHT*LHTSFS
Trigger: AGAAAAGGAAGTGTGGAGTCAAGTATGGCTGCCTGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR TCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACGCTGTTCTGCAACACTaGCACCCACGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNAVLQH*HPRLTL
Trigger: GAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACAGC...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTAGCCATCTCCTTCAGTaGTGCCAACCGGCACGTTCC +
Preference number: 4 (lower is better)
Translates to: YFYLTASTACMLTSQNGCSHLLQ*CQPARS
Trigger: GGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCT...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTAAGACTAAAAGGCTCCTaGGTTGACCAAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVRLKGS*VDQEKE
Trigger: CTCTTTCTCTTGGTCAACTCAGGAGCCTTTTAGTCT...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAATAACAAGTCTGAGATaGATGAAACCAGACACTGGG +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVITSLR*MKPDTG
Trigger: CCCAGTGTCTGGTTTCATTCATCTCAGACTTGTTAT...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGCCTTCTTTATTCTCTaGAGGATGGCTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKAFFIL*RMAWSP
Trigger: AGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCACACTTCCTTTTCTaGCAGACTCTTCGAATTCCG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPHFLF*QTLRIP
Trigger: CGGAATTCGAAGAGTCTGGCAGAAAAGGAAGTGTGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGGACGAGTTCTTCAGGTaGCTGTGCATCAGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMDEFFR*LCIRPW
Trigger: CCAGGGCCTGATGCACAGGCACCTGAAGAACTCGTC...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTGCTTCATTTACTGTaGCAACCAAAGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLLHLL*QPKLSP
Trigger: AGGGGAGAGCTTTGGTTGGCACAGTAAATGAAGCAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTGCTCCTTCTCCAGCTTaGCCATTTTGGCTTCATAGT +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCAPSPA*PFWLHS
Trigger: ACTATGAAGCCAAAATGGCCAAGCTGGAGAAGGAGC...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCTGTGCATCAGGCCCTaGCAGCGGCTGTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQLCIRP*QRLSKV
Trigger: GACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAG...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGAGGGGCTCATCAGACTaGAGGAGGAGGCTGGACTGC +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQRGSSD*RRRLDC
Trigger: GCAGTCCAGCCTCCTCCTCCAGTCTGATGAGCCCCT...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGGCAGGGTCCCTGATCTaGAAGTCAGTGATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMAGSLI*KSVMEG
Trigger: GCCCTCCATCACTGACTTCCAGATCAGGGACCCTGC...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATAAGACTAATAAATGGCTaGCTGAGAAGACAGTCCCTA +
Preference number: 4 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDIRLING*LRRQSL
Trigger: TAGGGACTGTCTTCTCAGCCAGCCATTTATTAGTCT...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTACTTGTCTTACTCGTGTaGTATCTGAAGTGCCTAACA +
Preference number: 4 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVLVLLV*YLKCLT
Trigger: TGTTAGGCACTTCAGATACCACACGAGTAAGACAAG...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAGGACACAGGCAAATGTaGGTGCATCTGACTCTACAA +
Preference number: 4 (lower is better)
Translates to: QANVGASDSTIWLGNIGEGHRQM*VHLTLQ
Trigger: TTGTAGAGTCAGATGCACCCACATTTGCCTGTGTCC...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGACACAGGCAAATGTaGGTGCATCTGACTCTACAA +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGHRQM*VHLTLQ
Trigger: TTGTAGAGTCAGATGCACCCACATTTGCCTGTGTCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTCTAGTCTCCCCTGCTTaGCTTGGCCCATTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: YFYLTASTACMLTSQNGCLVSPA*LGPFLP
Trigger: TGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAG...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACCTAGTCTCCCCTGCTTaGCTTGGCCCATTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNLVSPA*LGPFLP
Trigger: TGGCAGGAATGGGCCAAGCCAAGCAGGGGAGACTAG...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTAATGAAACCAGACACTaGGGGCTCAAAAGACAACCC +
Preference number: 4 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCNETRH*GLKRQP
Trigger: GGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATT...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
3UTR CAA 72 bp GTGGTTGATGATGGCTTAGGTGTATCTGCTTTCTCATaGGGGCTGAGCAATGATAGAATTTCTAGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: VVDDGLGVSAFS*GLSNDRISRAG
Trigger: CCCAGCCCTAGAAATTCTATCATTGCTCAGCCCCAATGAGAAAGCAGATACACCTAAGCCATCATCAACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGGGCTCTCCCCGGCTTTaGGCAGATACTCACACATGT +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMGSPRL*ADTHTC
Trigger: ACATGTGTGAGTATCTGCTCAAAGCCGGGGAGAGCC...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR TCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGCATAGGTCTTGTTGCTaGTGTCCAGCCTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMHRSCC*CPASHW
Trigger: CCAGTGGGAGGCTGGACATCAGCAACAAGACCTATG...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR TCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGTCCGAGAAGAGTTTTTaGCTGGCAAGGGCGGGGGAC +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQSEKSF*LARAGD
Trigger: GTCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGA...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCTTGGAAAAAGTTGTaGTGGGCGTGGAAGAACTTG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSWKKL*WAWKNL
Trigger: CAAGTTCTTCCACGCCCAGCACAACTTTTTCCAAGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp TTTTCTGCCAGACTCTTCGAATTCCGTCACTTTTCTTGTATAGAAAGCCCACTTTCCCAAACTGCTTGTTaGCTTGGTGCTGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: FSARLFEFRHFSCIESPLSQTAC*LGAGGC
Trigger: GCATCCACCAGCACCAAGGCAACAAGCAGTTTGGGA...AAGTGGGCTTTCTATACAAGAAAAGTGACGGAATTCGAAGAGTCTGGCAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR GCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTCGTCCTTGCTGTTCTaGAACACTGACACCCACGCC +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMSSLLF*NTDTHA
Trigger: GGCGTGGGTGTCAGTGTTGCAGAACAGCAAGGACGA...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTCTCTCTAGTCTCCCCTaGTTGGCTTGGCCCATTCCT +
Preference number: 4 (lower is better)
Translates to: YFYLTASTACMLTSQNGCLSSLP*LAWPIP
Trigger: AGGAATGGGCCAAGCCAAGCAGGGGAGACTAGAGAG...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGGAAAAAGTTGTGCTaGGCGTGGAAGAACTTGATG +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKWKKLC*AWKNLM
Trigger: CATCAAGTTCTTCCACGCCCAGCACAACTTTTTCCA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACGCCAGGCAGCTGTGTTaGCCATTGGTGCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNARQLC*PLVLSS
Trigger: ACTAGAGAGCACCAATGGCCAACACAGCTGCCTGGC...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGGAGACTCCCAGTCCTTaGGCCATCTCCTTCAGTGAT +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMETPSP*AISFSD
Trigger: ATCACTGAAGGAGATGGCTCAAGGACTGGGAGTCTC...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGACAGGAGGTCCCTGTTaGAAATGGCTGTCCAGAGTC +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMTGGPC*KWLSRV
Trigger: GACTCTGGACAGCCATTTGCAACAGGGACCTCCTGT...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGACTTTGACAGCCAAATaGAAGACGAGTTCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKTLTAK*KTSSSG
Trigger: ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR GCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACCTGGTTGTAGAGTGCTaGGTAGTGCAGAGCCGTGTT +
Preference number: 4 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNLVVEC*VVQSRV
Trigger: AACACGGCTCTGCACTACGCAGCACTCTACAACCAG...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTTCTTCATTCTCCACATaGCCAAGGCCGGAGCTATGG +
Preference number: 4 (lower is better)
Translates to: YFYLTASTACMLTSQNGCSSFST*PRPELW
Trigger: CCATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGA...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGTCACACATGTGCAGCTaGAAGATGCGCCGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQSHMCS*KMRRSL
Trigger: GAGAGAGCGGCGCATCTTCCAGCTGCACATGTGTGA...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGGCCTTCCAGCCATCTTaGAAAAAGTTGTGCTGGGCG +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMAFQPS*KKLCWA
Trigger: CGCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGC...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTTTCTCCTCAGGGTTTaGCCTCACTTGGCACGTCAG +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMFLLRV*PHLARQ
Trigger: CTGACGTGCCAAGTGAGGCCAAACCCTGAGGAGAAA...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CCA 90 bp TTTTCTGCCAGACTCTTCGAATTCCGTCACTTTTCTTGTATAGAAAGCCCACTTTGTCTTGCACACCCTTaGACCAAAGTCCGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: FSARLFEFRHFSCIESPLCLAHP*TKVREE
Trigger: CTCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACA...AAGTGGGCTTTCTATACAAGAAAAGTGACGGAATTCGAAGAGTCTGGCAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTTCCAGAGCCATGCCCTaGAATCTGACCCTGCCTATT +
Preference number: 4 (lower is better)
Translates to: YFYLTASTACMLTSQNGCSRAMP*NLTLPI
Trigger: AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGA...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGGCCAGGCAGCTGTGTTaGCCATTGGTGCTCTCTAGT +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQARQLC*PLVLSS
Trigger: ACTAGAGAGCACCAATGGCCAACACAGCTGCCTGGC...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGACAACCCTGTTCCTGTaGGAACCACAGACCAGTCAG +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMTTLFL*EPQTSQ
Trigger: CTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGATGTTGTTCAAGTTCTaGATCAGGTTCTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKMLFKF*IRFLKS
Trigger: GCTCTTCAAGAACCTGATTCAGAACTTGAACAACAT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR GCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTTCAGGGCTTCGTCCTTaGTGTTCTGCAACACTGACA +
Preference number: 4 (lower is better)
Translates to: YFYLTASTACMLTSQNGCSGLRP*CSATLT
Trigger: TGTCAGTGTTGCAGAACAGCAAGGACGAAGCCCTGA...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR GCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTCAGAGCTGTCTCGCCTaGTTCATTTACTGTGCCAAC +
Preference number: 4 (lower is better)
Translates to: YFYLTASTACMLTSQNGCQSCLA*FIYCAN
Trigger: GTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTG...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACAAGTTGCACAGAACTTaGTGGGAGACTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNKLHRT*WETPSP
Trigger: AGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGTGTGTTGGCCATTGGTaGTCTCTAGTCTCCCCTGCT +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQCVGHW*SLVSPA
Trigger: AGCAGGGGAGACTAGAGAGCACCAATGGCCAACACA...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCTCTGCAGGATGGCTTaGTCTCCTTCCAAGATCTCC +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQLCRMA*SPSKIS
Trigger: GGAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAG...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTTGTGGTGCTTCTTCCTaGCTATGTCCAGAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: YFYLTASTACMLTSQNGCCGASS*LCPELS
Trigger: AGACAGCTCTGGACATAGCCAGGAAGAAGCACCACA...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGACAACCCTGTTCCTGTaGGAACCACAGACCAGTCAG +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQTTLFL*EPQTSQ
Trigger: CTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGAAATGTGGGTGCATCTaGCTCTACAATTTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMKCGCI*LYNLAG
Trigger: CCCAGCCAAATTGTAGAGTCAGATGCACCCACATTT...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACGCCTTCTTTATTCTCTaGAGGATGGCTTGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNAFFIL*RMAWSP
Trigger: AGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGC...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGCTGCTTCATTTACTGTaGCAACCAAAGCTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMLLHLL*QPKLSP
Trigger: AGGGGAGAGCTTTGGTTGGCACAGTAAATGAAGCAG...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR GCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGAAGTTGCACAGAACTTaGTGGGAGACTCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQKLHRT*WETPSP
Trigger: AGGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTT...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGCCAGCTTGGCCATTTTaGCTTCATAGTCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMPAWPF*LHSPSM
Trigger: CATGGAAGGACTATGAAGCCAAAATGGCCAAGCTGG...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGAGACTAAAAGGCTCCTaGGTTGACCAAGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQRLKGS*VDQEKE
Trigger: CTCTTTCTCTTGGTCAACTCAGGAGCCTTTTAGTCT...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACATAACAAGTCTGAGATaGATGAAACCAGACACTGGG +
Preference number: 4 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNITSLR*MKPDTG
Trigger: CCCAGTGTCTGGTTTCATTCATCTCAGACTTGTTAT...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR GCA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGGAACCCTTAAGTCTCTaGCCTCCCAATTCTATTACT +
Preference number: 4 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMEPLSL*PPNSIT
Trigger: AGTAATAGAATTGGGAGGGCAGAGACTTAAGGGTTC...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTTCTGACTCTACAATTTaGCTGGGGAATATAGGAGAA +
Preference number: 4 (lower is better)
Translates to: YFYLTASTACMLTSQNGCSDSTI*LGNIGE
Trigger: TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR TCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGATGTTGTTCAAGTTCTaGATCAGGTTCTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQMLFKF*IRFLKS
Trigger: GCTCTTCAAGAACCTGATTCAGAACTTGAACAACAT...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CCA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGTCTGACTCTACAATTTaGCTGGGGAATATAGGAGAA +
Preference number: 4 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQSDSTI*LGNIGE
Trigger: TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS GCA 90 bp CTGAGGTCCTCCGCGGTGACGGCCAGGAACTCGGCGACGCTGAACTaGTCCGGCATGGCGGGCGCGAGCGTGGAGCTGCCGGAGCGGGGC +
Preference number: 5 (lower is better)
Translates to: LRSSAVTARNSATLN*SGMAGASVELPERG
Trigger: GCCCCGCTCCGGCAGCTCCACGCTCGCGCCCGCCATGCCGGAGCAGTTCAGCGTCGCCGAGTTCCTGGCCGTCACCGCGGAGGACCTCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000478858.5
ENST00000492982.6
ENST00000634459.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp GCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAAGATCGGGGCATCTaGGCGGCGAAGGCGGCGGCC +
Preference number: 5 (lower is better)
Translates to: AMSSFVRSCGSPSWPADPQDRGI*AAKAAA
Trigger: GGCCGCCGCCTTCGCCGCCAAGATGCCCCGATCTTG...GGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp TCAGGGTTTGGCCTCACTTGGCACGTCAGCAGGGTCAGCTTCACCGGGGGCCGGGTGAGCACGCCCAGGTaGGTGCTGAGCCACGTGGGG +
Preference number: 5 (lower is better)
Translates to: SGFGLTWHVSRVSFTGGRVSTPR*VLSHVG
Trigger: CCCCACGTGGCTCAGCACCAACCTGGGCGTGCTCAC...CCGGCCCCCGGTGAAGCTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp AGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCCAAGATCGGGGCATCTaGGCGGCGAAGGCGGCGGCC +
Preference number: 5 (lower is better)
Translates to: RPALHLRDEQLCEVVRLPQDRGI*AAKAAA
Trigger: GGCCGCCGCCTTCGCCGCCAAGATGCCCCGATCTTG...GGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS CCA 90 bp TCTGGAGGTGCCTGGGGGCTCTCGGAGGCCCTCTTCAGAGTTGGGTaGGGCTTGGCTGGGATCCCCAGGTTCCCAGGGATCCCTCCTGTC +
Preference number: 5 (lower is better)
Translates to: SGGAWGLSEALFRVG*GLAGIPRFPGIPPV
Trigger: GACAGGAGGGATCCCTGGGAACCTGGGGATCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCCTCCGAGAGCCCCCAGGCACCTCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618240.4
ENST00000635693.1
CDS-3UTR CAA 90 bp TGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCAGTGAGCACGCCCAGGTaGGTGCTGAGCCACGTGGGG +
Preference number: 5 (lower is better)
Translates to: WGLQPRSRSTGYSQACSSVSTPR*VLSHVG
Trigger: CCCCACGTGGCTCAGCACCAACCTGGGCGTGCTCAC...TGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTAGGCCCTCTTCAGAGTaGGGTGGGGCTTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: ARKAHAQFAVDARALDAGRPSSE*GGAWLG
Trigger: TCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCCT...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp CCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCTTCCCCTTCAGCAGCAGCTaGAGGCAGTCGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: PTGPVSLGRELQQAALLFPFSSS*RQSGWL
Trigger: CAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGG...GAAGAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CAA 90 bp ATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGCCCTTCAGCAGCAGCTaGAGGCAGTCGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: MSSFVRSCGSPSWPADPQPFSSS*RQSGWL
Trigger: CAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGG...CTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp CGTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCCCTTCAGCAGCAGCTaGAGGCAGTCGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RGVCSPAVAALAIPRPALPFSSS*RQSGWL
Trigger: CAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGG...AAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGRVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp CAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATCCAGGTGACCACCGTTCTGGATGTGAGCACGCCCAGGTaGGTGCTGAGCCACGTGGGG +
Preference number: 5 (lower is better)
Translates to: QSRVPVSSLGIQVTTVLDVSTPR*VLSHVG
Trigger: CCCCACGTGGCTCAGCACCAACCTGGGCGTGCTCAC...ATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp TCAGGGTTTGGCCTCACTTGGCACGTCAGCAGGGTCAGCTTCACCGGGGGCCGGGGCCGGAGCTATGGATaGCCCGCACAGCCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: SGFGLTWHVSRVSFTGGRGRSYG*PAQPSL
Trigger: TAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGCC...CCGGCCCCCGGTGAAGCTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp TCAGGGTTTGGCCTCACTTGGCACGTCAGCAGGGTCAGCTTCACCGGGGGCCGGTCCGTCCCAAACTGCTaGTTGCCTTGGTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: SGFGLTWHVSRVSFTGGRSVPNC*LPWCWW
Trigger: CCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGA...CCGGCCCCCGGTGAAGCTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: PAVAALAIPRPALHLRDERVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp GCCTCCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTGCCTGGTTGGCGACTTaGACAGCCAAATGCAAGACG +
Preference number: 5 (lower is better)
Translates to: ASHWPSEPGPGASASSASAWLAT*TAKCKT
Trigger: CGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGC...AGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CAA 90 bp CCCACTGGCCCAGTGAGCCTGGGCCGGGAGCTTCAGCAAGCAGCGCTTCTCTTCGGCAGGGAAGCCTGGTaGGCGACTTTGACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: PTGPVSLGRELQQAALLFGREAW*ATLTAK
Trigger: TTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC...GAAGAGAAGCGCTGCTTGCTGAAGCTCCCGGCCCAGGCTCACTGGGCCAGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CAA 90 bp GCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTGAGCACGCCATGTCTTGCACACCCTaGGACCAAAGTCCGAGAAGA +
Preference number: 5 (lower is better)
Translates to: AHAQFAVDARALDAGEHAMSCTP*DQSPRR
Trigger: TCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACAT...GGCGTGCTCACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCTGGCTCTCCCCGGCTTaGAGCAGATACTCACACATG +
Preference number: 5 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFWLSPA*SRYSHM
Trigger: CATGTGTGAGTATCTGCTCAAAGCCGGGGAGAGCCA...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp CCAGCGCTGGGCTCCCCGAGGAAGGCGCTGCTCAGGGCTTCGTCCTTGCTGTTCAGCCTTCCAGCCATCTaGGAAAAAGTTGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: PALGSPRKALLRASSLLFSLPAI*EKVVLG
Trigger: GCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGCT...GAACAGCAAGGACGAAGCCCTGAGCAGCGCCTTCCTCGGGGAGCCCAGCGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp CCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGTCCGTCCCAAACTGCTaGTTGCCTTGGTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: PAVAALAIPRPALHLRDESVPNC*LPWCWW
Trigger: CCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGA...CTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTGTGAGCACGCCCAGGTaGGTGCTGAGCCACGTGGGG +
Preference number: 5 (lower is better)
Translates to: PPFWMMKSTRGREAWLATVSTPR*VLSHVG
Trigger: CCCCACGTGGCTCAGCACCAACCTGGGCGTGCTCAC...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp ATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGAGCTCCTCACACTCCTaGTGGTGCTTCTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: MSSFVRSCGSPSWPADPQSSSHS*WCFFLA
Trigger: AGCCAGGAAGAAGCACCACAAGGAGTGTGAGGAGCT...CTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp GCGCGAAAAGCGCACGCCCAGTTCGCGGTGGACGCCCGAGCACTGGATGCAGGTAAAGTTGCACAGAACTaGCTGGGAGACTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: ARKAHAQFAVDARALDAGKVAQN*LGDSQS
Trigger: GGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTT...ACCTGCATCCAGTGCTCGGGCGTCCACCGCGAACTGGGCGTGCGCTTTTCGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCTCTCCCCTGCTTGGCTaGGCCCATTCCTGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEASPLLG*AHSCQG
Trigger: GCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGA...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCTCTCCCCTGCTTGGCTaGGCCCATTCCTGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTASPLLG*AHSCQG
Trigger: GCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGA...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS TCA 90 bp CCTGGGCCTGATGGAGTGCATGTACTGAGGCCGCCAGCTTCTCGATaGAGGGGAACAGGCTCTGGGCAGCCTTCCAGCCATTTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: PGPDGVHVLRPPASR*RGTGSGQPSSHLCW
Trigger: CCAGCACAAATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGGCCTCAGTACATGCACTCCATCAGGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478858.5
ENST00000634459.1
CDS GCA 90 bp GTTCTCACCTGTGCATCAGGCCCTGGCAGCGGCTGTCCAAAGTCCTaGCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTG +
Preference number: 5 (lower is better)
Translates to: VLTCASGPGSGCPKS*PLAKASSTDRRSLL
Trigger: CAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAGGTGAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CAA 90 bp CAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATCCAGGTGACCACCGTTCTGGATTGGGACAGGTGGCTGTaGCCTAAGGATTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: QSRVPVSSLGIQVTTVLDWDRWL*PKDSTA
Trigger: GGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCA...ATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp ATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGAGCCTTCCAGCCATCTaGGAAAAAGTTGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: MSSFVRSCGSPSWPADPQSLPAI*EKVVLG
Trigger: GCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGCT...CTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCAGCCTTCCAGCCATCTaGGAAAAAGTTGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGSLPAI*EKVVLG
Trigger: GCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGCT...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGAGTGAGCACGCCCAGGTaGGTGCTGAGCCACGTGGGG +
Preference number: 5 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGVSTPR*VLSHVG
Trigger: CCCCACGTGGCTCAGCACCAACCTGGGCGTGCTCAC...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CAA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCCCAAAGTCCTGCCCATaGGCAAAGGCCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSPKSCP*AKASST
Trigger: GGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGG...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACCCCTTCAGCAGCAGCTaGAGGCAGTCGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDPFSSS*RQSGWL
Trigger: CAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGG...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCCCCTTCAGCAGCAGCTaGAGGCAGTCGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAPFSSS*RQSGWL
Trigger: CAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGG...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp CATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGCCTGCTCCAGCAGCTCCTCACAGCTCCTCACACTCCTaGTGGTGCTTCTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: HVEGRQRSPPGPAPAAPHSSSHS*WCFFLA
Trigger: AGCCAGGAAGAAGCACCACAAGGAGTGTGAGGAGCT...GTGAGGAGCTGCTGGAGCAGGCCCAGGCGGGGACCTTTGCCTTCCCTCTACATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CAA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCAGGCCCTCTTCAGAGTaGGGTGGGGCTTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPARPSSE*GGAWLG
Trigger: TCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCCT...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CAA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTAGGCCCTCTTCAGAGTaGGGTGGGGCTTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCRPSSE*GGAWLG
Trigger: TCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCCT...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCGGCCGGAGCTATGGATaGCCCGCACAGCCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPGRSYG*PAQPSL
Trigger: TAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGCC...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCTGGGACAGGTGGCTGTaGCCTAAGGATTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAWDRWL*PKDSTA
Trigger: GGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCA...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp GTGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCCCATCTTGGAAAAAGTaGTGCTGGGCGTGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: VGSAAPQSQHWLFPGLLFPSWKK*CWAWKN
Trigger: GTTCTTCCACGCCCAGCACAACTTTTTCCAAGATGG...GAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp ATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGGACCCCCAGCCATCTTGGAAAAAGTaGTGCTGGGCGTGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: MSSFVRSCGSPSWPADPQPSWKK*CWAWKN
Trigger: GTTCTTCCACGCCCAGCACAACTTTTTCCAAGATGG...CTGGGGGTCCGCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp CACCTCCGCGATGAGCAGCTTTGTGAGGTCGTGCGGCTCCCCATCATGGCCGGCGTCAGGCAGCCATACTaGACTCCACACTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: HLRDEQLCEVVRLPIMAGVRQPY*TPHFLF
Trigger: GAAAAGGAAGTGTGGAGTCAAGTATGGCTGCCTGAC...GCCGGCCATGATGGGGAGCCGCACGACCTCACAAAGCTGCTCATCGCGGAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEARVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CAA 90 bp CAGAGCCGTGTTCCCGTCAGCAGCCTTGGCATCCAGGTGACCACCGTTCTGGATCCAAAGTCCTGCCCATaGGCAAAGGCCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: QSRVPVSSLGIQVTTVLDPKSCP*AKASST
Trigger: GGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGG...ATCCAGAACGGTGGTCACCTGGATGCCAAGGCTGCTGACGGGAACACGGCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CAA 90 bp CGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTGGCAGGGAAGCCTGGTaGGCGACTTTGACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: RLTLVLVLCLKVVRPVVGGREAW*ATLTAK
Trigger: TTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC...ACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACACCCTTCAGCAGCAGCTaGAGGCAGTCGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTPFSSS*RQSGWL
Trigger: CAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGG...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCCCCTTCAGCAGCAGCTaGAGGCAGTCGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: TAISPNRERPCVLGRGMAPFSSS*RQSGWL
Trigger: CAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGG...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CAA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCGTCCGAGAAGAGTTTTaGACTGGCAAGGGCGGGGGA +
Preference number: 5 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRVREEF*TGKGGG
Trigger: TCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGAC...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp CTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGTCCGAGAAGAGTTTTaGACTGGCAAGGGCGGGGGA +
Preference number: 5 (lower is better)
Translates to: LVLVLCLKVVRPVVGHQVVREEF*TGKGGG
Trigger: TCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGAC...GACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp GCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCAGGCCCTCTTCAGAGTaGGGTGGGGCTTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: AFHQRTTPAGPLSYSCGIRPSSE*GGAWLG
Trigger: TCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCCT...GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGAGGCCCTCTTCAGAGTaGGGTGGGGCTTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLRPSSE*GGAWLG
Trigger: TCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCCT...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CAA 90 bp CAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCACCCCTGCAGGGCCCTaGTCTTACTCGTGTGGTATC +
Preference number: 5 (lower is better)
Translates to: QAQPLRPAFHQRTTPAGPTPAGP*SYSCGI
Trigger: GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGT...GGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTTCTCCCCTGCTTGGCTaGGCCCATTCCTGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPSPLLG*AHSCQG
Trigger: GCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGA...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTCTCTGCAGGATGGCTaGGTCTCCTTCCAAGATCGG +
Preference number: 5 (lower is better)
Translates to: QSQHWLFPGLLFTSAMSSSLQDG*VSFQDR
Trigger: CCGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGA...GCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS GCA 90 bp TTAGACAGGTGGGTTATAAGTGGCCCTTGGAGGGGTTCTCACCTGTaGATCAGGCCCTGGCAGCGGCTGTCCAAAGTCCTGCCCATTGGC +
Preference number: 5 (lower is better)
Translates to: LDRWVISGPWRGSHL*IRPWQRLSKVLPIG
Trigger: GCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAGGTGAGAACCCCTCCAAGGGCCACTTATAACCCACCTGTCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS CCA 90 bp TTGGCACGTCAGCAGGGTCAGCTTCACCGGGGGCCGGTTTATCTGTaGGAATTTAGGGGCGGAGGATGTATGCATTACCTCTGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: LARQQGQLHRGPVYL*EFRGGGCMHYLWPS
Trigger: GGAGGGCCAGAGGTAATGCATACATCCTCCGCCCCTAAATTCCCACAGATAAACCGGCCCCCGGTGAAGCTGACCCTGCTGACGTGCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530874.1
ENST00000635442.1
CDS-3UTR CAA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGGCCGGAGCTATGGATaGCCCGCACAGCCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVGRSYG*PAQPSL
Trigger: TAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGCC...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp TGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCATTCTCCAGCTGTTTTTaGGAATCCTGTCGACCGTCC +
Preference number: 5 (lower is better)
Translates to: WGLQPRSRSTGYSQACSSFSSCF*ESCRPS
Trigger: GGACGGTCGACAGGATTCCAAAAAACAGCTGGAGAA...TGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp TGGGGTCTGCAGCCCCGCAGTCGCAGCACTGGCTATTCCCAGGCCTGCTCTTCACCATCTTGGAAAAAGTaGTGCTGGGCGTGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: WGLQPRSRSTGYSQACSSPSWKK*CWAWKN
Trigger: GTTCTTCCACGCCCAGCACAACTTTTTCCAAGATGG...TGAAGAGCAGGCCTGGGAATAGCCAGTGCTGCGACTGCGGGGCTGCAGACCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp TCCTGCCCATTGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATGAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: SCPLAKASSTDRRSLLQMRVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCAGTGAGCACGCCCAGGTaGGTGCTGAGCCACGTGGGG +
Preference number: 5 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAVSTPR*VLSHVG
Trigger: CCCCACGTGGCTCAGCACCAACCTGGGCGTGCTCAC...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CAA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCGACAGGAGGTCCCTGTaGCAAATGGCTGTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRDRRSL*QMAVQS
Trigger: ACTCTGGACAGCCATTTGCAACAGGGACCTCCTGTC...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTCCAAAGTCCTGCCCATaGGCAAAGGCCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCPKSCP*AKASST
Trigger: GGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGG...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCCCAAAGTCCTGCCCATaGGCAAAGGCCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSPKSCP*AKASST
Trigger: GGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGG...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACGGCAGGGAAGCCTGGTaGGCGACTTTGACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDGREAW*ATLTAK
Trigger: TTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCGTCCGAGAAGAGTTTTaGACTGGCAAGGGCGGGGGA +
Preference number: 5 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPAVREEF*TGKGGG
Trigger: TCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGAC...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCAGGCCCTCTTCAGAGTaGGGTGGGGCTTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTRPSSE*GGAWLG
Trigger: TCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCCT...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGAGGCCCTCTTCAGAGTaGGGTGGGGCTTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: CPCEAPRLTGEIESRSDERPSSE*GGAWLG
Trigger: TCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCCT...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGAGGCCCTCTTCAGAGTaGGGTGGGGCTTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQERPSSE*GGAWLG
Trigger: TCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCCT...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CAA 90 bp CCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCGAAGACAGTCCCTACTaGGCAGGGTCCCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: PVPVGTTDQSGLQGKQHSEDSPY*AGSLIW
Trigger: CCAGATCAGGGACCCTGCCAAGTAGGGACTGTCTTC...GCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCACCCCTGCAGGGCCCTaGTCTTACTCGTGTGGTATC +
Preference number: 5 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSTPAGP*SYSCGI
Trigger: GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCACCCCTGCAGGGCCCTaGTCTTACTCGTGTGGTATC +
Preference number: 5 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPATPAGP*SYSCGI
Trigger: GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGT...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCACCCCTGCAGGGCCCTaGTCTTACTCGTGTGGTATC +
Preference number: 5 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTATPAGP*SYSCGI
Trigger: GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGT...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACCAGCTGTGTTGGCCATaGGTGCTCTCTAGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDQLCWP*VLSSLP
Trigger: GGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCCAGCTGTGTTGGCCATaGGTGCTCTCTAGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTAQLCWP*VLSSLP
Trigger: GGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCAGCTGTGTTGGCCATaGGTGCTCTCTAGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEAQLCWP*VLSSLP
Trigger: GGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS GCA 90 bp CCAAGGCCGGAGCTATGGATTGCCCGCACAGCCTTCTTTATTCTCTaGAGGATGGCTTGGTCTCCTTCCAAGATCGGGGCATCTTGGCGG +
Preference number: 5 (lower is better)
Translates to: PRPELWIARTAFFIL*RMAWSPSKIGASWR
Trigger: CCGCCAAGATGCCCCGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478858.5
ENST00000492982.6
ENST00000634459.1
ENST00000634705.1
CDS CCA 90 bp CGGAGCTATGGATTGCCCGCACAGCCTTCTTTATTCTCTGCAGGATaGCTTGGTCTCCTTCCAAGATCGGGGCATCTTGGCGGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: RSYGLPAQPSLFSAG*LGLLPRSGHLGGEG
Trigger: GCCTTCGCCGCCAAGATGCCCCGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478858.5
ENST00000492982.6
ENST00000634459.1
ENST00000634705.1
CDS-3UTR CAA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGTGGGACAGGTGGCTGTaGCCTAAGGATTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEWDRWL*PKDSTA
Trigger: GGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCA...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCTGGGACAGGTGGCTGTaGCCTAAGGATTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTWDRWL*PKDSTA
Trigger: GGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCA...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: CPCEAPRLTGEIESRSDERVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CAA 90 bp CAGTCCCTACTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCGACAGGAGGTCCCTGTaGCAAATGGCTGTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: QSLLGRVPDLEVSDGGLSDRRSL*QMAVQS
Trigger: ACTCTGGACAGCCATTTGCAACAGGGACCTCCTGTC...GGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAGTAGGGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp AGCTTCAGCAAGCAGCGCTTCTCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCCCAAAGTCCTGCCCATaGGCAAAGGCCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: SFSKQRFSSSSSSLSEPGPKSCP*AKASST
Trigger: GGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGG...GCCTGGCTCTGACAGTGAGGAGGATGAGGAAGAGAAGCGCTGCTTGCTGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CAA 90 bp TCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAAGTGGCAGGGAAGCCTGGTaGGCGACTTTGACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: SATLTPTPHTRARPLPESGREAW*ATLTAK
Trigger: TTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC...ACTTTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp GACCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGAGCTCCTCACACTCCTaGTGGTGCTTCTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: DQLSTKGPPLQGPCLTRVSSSHS*WCFFLA
Trigger: AGCCAGGAAGAAGCACCACAAGGAGTGTGAGGAGCT...CACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACAGCTCCTCACACTCCTaGTGGTGCTTCTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDSSSHS*WCFFLA
Trigger: AGCCAGGAAGAAGCACCACAAGGAGTGTGAGGAGCT...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCTCCACTGGCATGTCTaGCACACCCTTGGACCAAAG +
Preference number: 5 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEALHWHV*HTLGPK
Trigger: CTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGAAGACAGTCCCTACTaGGCAGGGTCCCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSEDSPY*AGSLIW
Trigger: CCAGATCAGGGACCCTGCCAAGTAGGGACTGTCTTC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAACCCCTGCAGGGCCCTaGTCTTACTCGTGTGGTATC +
Preference number: 5 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTTPAGP*SYSCGI
Trigger: GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGT...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS CCA 90 bp GAAGAACTGGGGAATATGTTAGACAGGTGGGTTATAAGTGGCCCTTaGAGGGGTTCTCACCTGTGCATCAGGCCCTGGCAGCGGCTGTCC +
Preference number: 5 (lower is better)
Translates to: EELGNMLDRWVISGP*RGSHLCIRPWQRLS
Trigger: GGACAGCCGCTGCCAGGGCCTGATGCACAGGTGAGAACCCCTCCAAGGGCCACTTATAACCCACCTGTCTAACATATTCCCCAGTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CAA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACTCTCTGCAGGATGGCTaGGTCTCCTTCCAAGATCTC +
Preference number: 5 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDSLQDG*VSFQDL
Trigger: GAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGA...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTTCTCTGCAGGATGGCTaGGTCTCCTTCCAAGATCTC +
Preference number: 5 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGSLQDG*VSFQDL
Trigger: GAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGA...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGCCGGAGCTATGGATaGCCCGCACAGCCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEGRSYG*PAQPSL
Trigger: TAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGCC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTTGGGACAGGTGGCTGTaGCCTAAGGATTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSWDRWL*PKDSTA
Trigger: GGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCA...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACTGGCTCTCCCCGGCTTaGAGCAGATACTCACACATG +
Preference number: 5 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNWLSPA*SRYSHM
Trigger: CATGTGTGAGTATCTGCTCAAAGCCGGGGAGAGCCA...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CAA 90 bp CTCGTGCTCGTCCTCTGCCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCCCATCTTGGAAAAAGTaGTGCTGGGCGTGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: LVLVLCLKVVRPVVGHQVPSWKK*CWAWKN
Trigger: GTTCTTCCACGCCCAGCACAACTTTTTCCAAGATGG...GACCTGGTGACCCACAACCGGACGTACCACTTTCAGGCAGAGGACGAGCACGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTTCCGTCCCAAACTGCTaGTTGCCTTGGTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPSVPNC*LPWCWW
Trigger: CCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGA...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CAA 90 bp CCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: PESGTSGCGSPGRSTFSPRVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...AGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp TGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAAGACAGGAGGTCCCTGTaGCAAATGGCTGTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: CSATLTPTPHTRARPLPEDRRSL*QMAVQS
Trigger: ACTCTGGACAGCCATTTGCAACAGGGACCTCCTGTC...TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGGACAGGAGGTCCCTGTaGCAAATGGCTGTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLDRRSL*QMAVQS
Trigger: ACTCTGGACAGCCATTTGCAACAGGGACCTCCTGTC...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACGCCTGGTTGGCGACTTaGACAGCCAAATGCAAGACG +
Preference number: 5 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNAWLAT*TAKCKT
Trigger: CGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGC...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACGGCAGGGAAGCCTGGTaGGCGACTTTGACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHGREAW*ATLTAK
Trigger: TTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp TGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGACCCTTCAGCAGCAGCTaGAGGCAGTCGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: CQSQALWKLPRSSPHVEGPFSSS*RQSGWL
Trigger: CAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGG...TCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CAA 90 bp AGCTTCAGCAAGCAGCGCTTCTCTTCCTCATCCTCCTCACTGTCAGAGCCAGGCAGCTCCTCACACTCCTaGTGGTGCTTCTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SFSKQRFSSSSSSLSEPGSSSHS*WCFFLA
Trigger: AGCCAGGAAGAAGCACCACAAGGAGTGTGAGGAGCT...GCCTGGCTCTGACAGTGAGGAGGATGAGGAAGAGAAGCGCTGCTTGCTGAAGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CAA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACGTCCGAGAAGAGTTTTaGACTGGCAAGGGCGGGGGA +
Preference number: 5 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHVREEF*TGKGGG
Trigger: TCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGAC...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp CTCCCAGTCCTTGAGCCATCTCCTTCAGTGATGCCAACCGGCACGTTCCTTCTGCTCCACTGGCATGTCTaGCACACCCTTGGACCAAAG +
Preference number: 5 (lower is better)
Translates to: LPVLEPSPSVMPTGTFLLLHWHV*HTLGPK
Trigger: CTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAG...CAGAAGGAACGTGCCGGTTGGCATCACTGAAGGAGATGGCTCAAGGACTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp GCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCCTGAAGACAGTCCCTACTaGGCAGGGTCCCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: AYSQAQPLRPAFHQRTTPEDSPY*AGSLIW
Trigger: CCAGATCAGGGACCCTGCCAAGTAGGGACTGTCTTC...AGGGGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGAAGACAGTCCCTACTaGGCAGGGTCCCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEEDSPY*AGSLIW
Trigger: CCAGATCAGGGACCCTGCCAAGTAGGGACTGTCTTC...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGAACCCCTGCAGGGCCCTaGTCTTACTCGTGTGGTATC +
Preference number: 5 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGTPAGP*SYSCGI
Trigger: GATACCACACGAGTAAGACAAGGGCCCTGCAGGGGT...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCCAGCTGTGTTGGCCATaGGTGCTCTCTAGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTQLCWP*VLSSLP
Trigger: GGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS TCA 90 bp CCTTCCAGCCATTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTaGAGGAAGTCAGGACCTTGCTTCATCTGGCTCTCCCCGGCTTTG +
Preference number: 5 (lower is better)
Translates to: PSSHLCWAWKNLMRL*RKSGPCFIWLSPAL
Trigger: CAAAGCCGGGGAGAGCCAGATGAAGCAAGGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAAATGGCTGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478858.5
ENST00000634459.1
CDS CCA 90 bp TCCTGGAGAAGAACTGGGGAATATGTTAGACAGGTGGGTTATAAGTaGCCCTTGGAGGGGTTCTCACCTGTGCATCAGGCCCTGGCAGCG +
Preference number: 5 (lower is better)
Translates to: SWRRTGEYVRQVGYK*PLEGFSPVHQALAA
Trigger: CGCTGCCAGGGCCTGATGCACAGGTGAGAACCCCTCCAAGGGCCACTTATAACCCACCTGTCTAACATATTCCCCAGTTCTTCTCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CAA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCTCTCTGCAGGATGGCTaGGTCTCCTTCCAAGATCTC +
Preference number: 5 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSSLQDG*VSFQDL
Trigger: GAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGA...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CCTGAAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTGGCCGGAGCTATGGATaGCCCGCACAGCCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: PESGTSGCGSPGRSTFSPGRSYG*PAQPSL
Trigger: TAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGCC...AGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTTCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp GGCCAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCGGCCGGAGCTATGGATaGCCCGCACAGCCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: GQQGASLAKVAQNLLGDSGRSYG*PAQPSL
Trigger: TAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGCC...GGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000492982.6
ENST00000618240.4
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CAA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTCCATCTTGGAAAAAGTaGTGCTGGGCGTGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGPSWKK*CWAWKN
Trigger: GTTCTTCCACGCCCAGCACAACTTTTTCCAAGATGG...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CAA 90 bp ACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAAGCCTTCCAGCCATCTaGGAAAAAGTTGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: TLFLWEPQTSQVSRGNSTSLPAI*EKVVLG
Trigger: GCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGCT...TGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CAA 90 bp AAAGTGGTACGTCCGGTTGTGGGTCACCAGGTCGAAGCACTTTTTCTCCTCAGGTCCGTCCCAAACTGCTaGTTGCCTTGGTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: KVVRPVVGHQVEALFLLRSVPNC*LPWCWW
Trigger: CCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGA...CCTGAGGAGAAAAAGTGCTTCGACCTGGTGACCCACAACCGGACGTACCACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000475814.5
ENST00000492982.6
ENST00000634705.1
ENST00000634883.1
CDS-3UTR CAA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCATCCGTCCCAAACTGCTaGTTGCCTTGGTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: GREAWLATLTAKCKTSSSSVPNC*LPWCWW
Trigger: CCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGA...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCGTCAGGCAGCCATACTaGACTCCACACTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTAVRQPY*TPHFLF
Trigger: GAAAAGGAAGTGTGGAGTCAAGTATGGCTGCCTGAC...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGTGAGCACGCCCAGGTaGGTGCTGAGCCACGTGGGG +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKVSTPR*VLSHVG
Trigger: CCCCACGTGGCTCAGCACCAACCTGGGCGTGCTCAC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTGCCTCCATGACCTCATaGAAGCTCGTGTTTCCCATG +
Preference number: 5 (lower is better)
Translates to: PPFWMMKSTRGREAWLATASMTS*KLVFPM
Trigger: CATGGGAAACACGAGCTTCAATGAGGTCATGGAGGC...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CAA 90 bp ACAACCCTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCGCCTCCATGACCTCATaGAAGCTCGTGTTTCCCATG +
Preference number: 5 (lower is better)
Translates to: TTLFLWEPQTSQVSRGNSASMTS*KLVFPM
Trigger: CATGGGAAACACGAGCTTCAATGAGGTCATGGAGGC...GCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAGGGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp GGCATCCAGGTGACCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCGCCTCCATGACCTCATaGAAGCTCGTGTTTCCCATG +
Preference number: 5 (lower is better)
Translates to: GIQVTTVLDDEIHQRQGSASMTS*KLVFPM
Trigger: CATGGGAAACACGAGCTTCAATGAGGTCATGGAGGC...GCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGGTCACCTGGATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CAA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCACCAAAGTCCTGCCCATaGGCAAAGGCCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: GREAWLATLTAKCKTSSSPKSCP*AKASST
Trigger: GGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGG...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CAA 90 bp CTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTCGGCAGGGAAGCCTGGTaGGCGACTTTGACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: LILLTVRARLCGNYPGVVGREAW*ATLTAK
Trigger: TTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC...GACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CAA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGAAGCTCCTCACACTCCTaGTGGTGCTTCTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGSSSHS*WCFFLA
Trigger: AGCCAGGAAGAAGCACCACAAGGAGTGTGAGGAGCT...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACAGCTCCTCACACTCCTaGTGGTGCTTCTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHSSSHS*WCFFLA
Trigger: AGCCAGGAAGAAGCACCACAAGGAGTGTGAGGAGCT...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCATGTCTTGCACACCCTaGGACCAAAGTCCGAGAAGA +
Preference number: 5 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSMSCTP*DQSPRR
Trigger: TCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACAT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp CTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCCCAGACATGTCTTGCACACCCTaGGACCAAAGTCCGAGAAGA +
Preference number: 5 (lower is better)
Translates to: LIWKSVMEGSPALVKPPDMSCTP*DQSPRR
Trigger: TCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACAT...GTCTGGGGGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCAAAGTTGCACAGAACTaGCTGGGAGACTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: TAISPNRERPCVLGRGMAKVAQN*LGDSQS
Trigger: GGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTT...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CAA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACAAAGTTGCACAGAACTaGCTGGGAGACTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNKVAQN*LGDSQS
Trigger: GGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTT...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGTCTCTGCAGGATGGCTaGGTCTCCTTCCAAGATCGG +
Preference number: 5 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGSLQDG*VSFQDR
Trigger: CCGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGA...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGATCTCTGCAGGATGGCTaGGTCTCCTTCCAAGATCTC +
Preference number: 5 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGSLQDG*VSFQDL
Trigger: GAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGA...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCTTCTCCAGCTGTTTTTaGGAATCCTGTCGACCGTCC +
Preference number: 5 (lower is better)
Translates to: TAISPNRERPCVLGRGMAFSSCF*ESCRPS
Trigger: GGACGGTCGACAGGATTCCAAAAAACAGCTGGAGAA...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635693.1
CDS-3UTR CAA 90 bp CCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGGGAGCCTCCATGACCTCATaGAAGCTCGTGTTTCCCATG +
Preference number: 5 (lower is better)
Translates to: PCEAPRLTGEIESRSDEGASMTS*KLVFPM
Trigger: CATGGGAAACACGAGCTTCAATGAGGTCATGGAGGC...TCCCTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTGCCTGGTTGGCGACTTaGACAGCCAAATGCAAGACG +
Preference number: 5 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSAWLAT*TAKCKT
Trigger: CGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGC...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CAA 90 bp AAAGTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTGAAGGAAGTCAGGACCGTCCGAGAAGAGTTTTaGACTGGCAAGGGCGGGGGA +
Preference number: 5 (lower is better)
Translates to: KVVLGVEELDEALKEVRTVREEF*TGKGGG
Trigger: TCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGAC...GGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp ACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCATGGCCATGTCTTGCACACCCTaGGACCAAAGTCCGAGAAGA +
Preference number: 5 (lower is better)
Translates to: TAISPNRERPCVLGRGMAMSCTP*DQSPRR
Trigger: TCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACAT...GGCCATGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CAA 90 bp CAGCTGTGTTGGCCATTGGTGCTCTCTAGTCTCCCCTGCTTGGCTTGGCCCATTATGTCTTGCACACCCTaGGACCAAAGTCCGAGAAGA +
Preference number: 5 (lower is better)
Translates to: QLCWPLVLSSLPCLAWPIMSCTP*DQSPRR
Trigger: TCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACAT...AATGGGCCAAGCCAAGCAGGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp TGCCCTTGTGAAGCCCCCAGACTGACGGGGGAAATAGAGTCTCGATCTGATGAGAAAGTTGCACAGAACTaGCTGGGAGACTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: CPCEAPRLTGEIESRSDEKVAQN*LGDSQS
Trigger: GGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTT...CTCATCAGATCGAGACTCTATTTCCCCCGTCAGTCTGGGGGCTTCACAAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCCTAGTCTTGCAAAAGTaGCACAGAACTTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSLVLQK*HRTCWE
Trigger: CTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAG...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CAA 90 bp GAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTCAGATCCAGCCCTAGTCTTGCAAAAGTaGCACAGAACTTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: EGLRVLQLKPAQEHSDPALVLQK*HRTCWE
Trigger: CTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAG...GGCTGGATCTGAGTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CAA 90 bp AGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTGAAGCCCTAGTCTTGCAAAAGTaGCACAGAACTTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RVPDLEVSDGGLSCPCEALVLQK*HRTCWE
Trigger: CTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAG...GGCTTCACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp TCCAGCCACAGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCAGCAAGGAGCTAGTCTaGCAAAAGTTGCACAGAACT +
Preference number: 5 (lower is better)
Translates to: SSHRAPRPLAGNEIGKNRSKELV*QKLHRT
Trigger: AGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCT...GCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCTGTGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CAA 90 bp AGGGCTCCCAGGCCCCTAGCGGGTAATGAGATAGGAAAGAACCGCCATCAGTCCAGTACAGCATGCATGTaGACCAGCCAGAATGGATGT +
Preference number: 5 (lower is better)
Translates to: RAPRPLAGNEIGKNRHQSSTACM*TSQNGC
Trigger: ACATCCATTCTGGCTGGTCAACATGCATGCTGTACT...GGACTGATGGCGGTTCTTTCCTATCTCATTACCCGCTAGGGGCCTGGGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCTCCCCTGCTTGGCTaGGCCCATTCCTGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSPLLG*AHSCQG
Trigger: GCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS GCA 90 bp CCAAGGCCGGAGCTATGGATTGCCCGCACAGCCTTCTTTATTCTCTaGAGGATGGCTTGGTCTCCTTCCAAGATCTCTGGGGAGAATACA +
Preference number: 5 (lower is better)
Translates to: PRPELWIARTAFFIL*RMAWSPSKISGENT
Trigger: TGTATTCTCCCCAGAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449467.2
ENST00000635351.1
CDS-3UTR CAA 90 bp CCTGCCTATTCCCAAGCCCAACCCTTAAGACCAGCTTTCCACCAAAGGACCACCTTCTCCAGCTGTTTTTaGGAATCCTGTCGACCGTCC +
Preference number: 5 (lower is better)
Translates to: PAYSQAQPLRPAFHQRTTFSSCF*ESCRPS
Trigger: GGACGGTCGACAGGATTCCAAAAAACAGCTGGAGAA...GGTGGTCCTTTGGTGGAAAGCTGGTCTTAAGGGTTGGGCTTGGGAATAGGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACTTCTCCAGCTGTTTTTaGGAATCCTGTCGACCGTCC +
Preference number: 5 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHFSSCF*ESCRPS
Trigger: GGACGGTCGACAGGATTCCAAAAAACAGCTGGAGAA...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTTGGCTCTCCCCGGCTTaGAGCAGATACTCACACATG +
Preference number: 5 (lower is better)
Translates to: REAWLATLTAKCKTSSSGWLSPA*SRYSHM
Trigger: CATGTGTGAGTATCTGCTCAAAGCCGGGGAGAGCCA...ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTATCCGTCCCAAACTGCTaGTTGCCTTGGTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVSVPNC*LPWCWW
Trigger: CCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGA...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CAA 90 bp GAGTCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGGTCAGGCAGCCATACTaGACTCCACACTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: ESRSDEGLRVLQLKPAQEVRQPY*TPHFLF
Trigger: GAAAAGGAAGTGTGGAGTCAAGTATGGCTGCCTGAC...CTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CAA 90 bp CCTCATCCTCCTCACTGTCAGAGCCAGGCTCTGTGGAAATTACCCAGGAGTAGTGCCTCCATGACCTCATaGAAGCTCGTGTTTCCCATG +
Preference number: 5 (lower is better)
Translates to: PHPPHCQSQALWKLPRSSASMTS*KLVFPM
Trigger: CATGGGAAACACGAGCTTCAATGAGGTCATGGAGGC...ACTACTCCTGGGTAATTTCCACAGAGCCTGGCTCTGACAGTGAGGAGGATGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CAA 90 bp AGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCAGGTGACAGGAGGTCCCTGTaGCAAATGGCTGTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: REAWLATLTAKCKTSSSGDRRSL*QMAVQS
Trigger: ACTCTGGACAGCCATTTGCAACAGGGACCTCCTGTC...ACCTGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CAA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGGACAGGAGGTCCCTGTaGCAAATGGCTGTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRDRRSL*QMAVQS
Trigger: ACTCTGGACAGCCATTTGCAACAGGGACCTCCTGTC...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CAA 90 bp GGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCTGCCTGGTTGGCGACTTaGACAGCCAAATGCAAGACG +
Preference number: 5 (lower is better)
Translates to: GYVQSCLACFIYCANQSSAWLAT*TAKCKT
Trigger: CGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGC...AGAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCCTTCAGCAGCAGCTaGAGGCAGTCGGGCTGGTTG +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPFSSS*RQSGWL
Trigger: CAACCAGCCCGACTGCCTCAAGCTGCTGCTGAAGGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp TCTTCCTGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAGCTCCTCACACTCCTaGTGGTGCTTCTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SSWLCPELSRLLHLLCQPSSSHS*WCFFLA
Trigger: AGCCAGGAAGAAGCACCACAAGGAGTGTGAGGAGCT...TGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCAGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484418.1
ENST00000492982.6
ENST00000634705.1
ENST00000635167.1
CDS-3UTR CAA 90 bp AAAGTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTGAAGGAAGTCAGGACCCTCCACTGGCATGTCTaGCACACCCTTGGACCAAAG +
Preference number: 5 (lower is better)
Translates to: KVVLGVEELDEALKEVRTLHWHV*HTLGPK
Trigger: CTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAG...GGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGGCCCTCTTCAGAGTaGGGTGGGGCTTGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKRPSSE*GGAWLG
Trigger: TCCCAGCCAAGCCCCACCCAACTCTGAAGAGGGCCT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CAA 90 bp TGTTCTGCAACACTGACACCCACGCCTCACACTCGTGCTCGTCCTCTGCCTGAACTAGTCTTGCAAAAGTaGCACAGAACTTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: CSATLTPTPHTRARPLPELVLQK*HRTCWE
Trigger: CTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAG...TTCAGGCAGAGGACGAGCACGAGTGTGAGGCGTGGGTGTCAGTGTTGCAGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp CTTGGCAGGGTCCCTGATCTGGAAGTCAGTGATGGAGGGCTCTCCTGCCCTTGTAGCAAGGAGCTAGTCTaGCAAAAGTTGCACAGAACT +
Preference number: 5 (lower is better)
Translates to: LGRVPDLEVSDGGLSCPCSKELV*QKLHRT
Trigger: AGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCT...ACAAGGGCAGGAGAGCCCTCCATCACTGACTTCCAGATCAGGGACCCTGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CCAGCTTTCCACCAAAGGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTAGCAAGGAGCTAGTCTaGCAAAAGTTGCACAGAACT +
Preference number: 5 (lower is better)
Translates to: PAFHQRTTPAGPLSYSCGSKELV*QKLHRT
Trigger: AGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCT...ACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCCTTTGGTGGAAAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp CTGTTCCTGTGGGAACCACAGACCAGTCAGGTCTCCAGGGGAAACAGCACAGCCAGCAAGGAGCTAGTCTaGCAAAAGTTGCACAGAACT +
Preference number: 5 (lower is better)
Translates to: LFLWEPQTSQVSRGNSTASKELV*QKLHRT
Trigger: AGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCT...GGCTGTGCTGTTTCCCCTGGAGACCTGACTGGTCTGTGGTTCCCACAGGAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS CCA 90 bp CGGAGCTATGGATTGCCCGCACAGCCTTCTTTATTCTCTGCAGGATaGCTTGGTCTCCTTCCAAGATCTCTGGGGAGAATACAGGGATTG +
Preference number: 5 (lower is better)
Translates to: RSYGLPAQPSLFSAG*LGLLPRSLGRIQGL
Trigger: CAATCCCTGTATTCTCCCCAGAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449467.2
ENST00000635351.1
CDS CCA 90 bp GTAACAGCTGGTCCTGGAGAAGAACTGGGGAATATGTTAGACAGGTaGGTTATAAGTGGCCCTTGGAGGGGTTCTCACCTGTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: VTAGPGEELGNMLDR*VISGPWRGSHLCIR
Trigger: CCTGATGCACAGGTGAGAACCCCTCCAAGGGCCACTTATAACCCACCTGTCTAACATATTCCCCAGTTCTTCTCCAGGACCAGCTGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGGGACAGGTGGCTGTaGCCTAAGGATTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKWDRWL*PKDSTA
Trigger: GGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR CAA 90 bp CAGGCTCTGTGGAAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGAGCCTTCCAGCCATCTaGGAAAAAGTTGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: QALWKLPRSSPHVEGRQRSLPAI*EKVVLG
Trigger: GCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGCT...CCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTTCCACAGAGCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGGGTTTGGCCTCACTaGGCACGTCAGCAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKRVWPH*ARQQGQ
Trigger: CTGACCCTGCTGACGTGCCAAGTGAGGCCAAACCCT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGCCAAAGTCCTGCCCATaGGCAAAGGCCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVPKSCP*AKASST
Trigger: GGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGG...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp AAAGTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTGAAGGAAGTCAGGACCAAAGTTGCACAGAACTaGCTGGGAGACTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: KVVLGVEELDEALKEVRTKVAQN*LGDSQS
Trigger: GGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTT...GGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp TCTCGATCTGATGAGGGACTGAGAGTTCTGCAGCTGAAGCCAGCTCAGGAGCACCTAGTCTTGCAAAAGTaGCACAGAACTTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SRSDEGLRVLQLKPAQEHLVLQK*HRTCWE
Trigger: CTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAG...GTGCTCCTGAGCTGGCTTCAGCTGCAGAACTCTCAGTCCCTCATCAGATCGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CAA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGGAAGACAGTCCCTACTaGGCAGGGTCCCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVEDSPY*AGSLIW
Trigger: CCAGATCAGGGACCCTGCCAAGTAGGGACTGTCTTC...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTAGAAGACAGTCCCTACTaGGCAGGGTCCCTGATCTGG +
Preference number: 5 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVEDSPY*AGSLIW
Trigger: CCAGATCAGGGACCCTGCCAAGTAGGGACTGTCTTC...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGCAGCTGTGTTGGCCATaGGTGCTCTCTAGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVQLCWP*VLSSLP
Trigger: GGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTACAGCTGTGTTGGCCATaGGTGCTCTCTAGTCTCCCC +
Preference number: 5 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVQLCWP*VLSSLP
Trigger: GGGGAGACTAGAGAGCACCAATGGCCAACACAGCTG...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGCCGGAGCTATGGATaGCCCGCACAGCCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGRSYG*PAQPSL
Trigger: TAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000618240.4
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635693.1
CDS-3UTR CAA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGTGGCTCTCCCCGGCTTaGAGCAGATACTCACACATG +
Preference number: 5 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVWLSPA*SRYSHM
Trigger: CATGTGTGAGTATCTGCTCAAAGCCGGGGAGAGCCA...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CAA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCACCATCTTGGAAAAAGTaGTGCTGGGCGTGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAPSWKK*CWAWKN
Trigger: GTTCTTCCACGCCCAGCACAACTTTTTCCAAGATGG...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCCGTCCCAAACTGCTaGTTGCCTTGGTGCTGGTGG +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSVPNC*LPWCWW
Trigger: CCACCAGCACCAAGGCAACAAGCAGTTTGGGACGGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp GCACTGGCTATTCCCAGGCCTGCTCTTCACCTCCGCGATGAGCAGCTTTGTGAGATTCCGTCACTTTTCTaGTATAGAAAGCCCACTTTC +
Preference number: 5 (lower is better)
Translates to: ALAIPRPALHLRDEQLCEIPSLF*YRKPTF
Trigger: GAAAGTGGGCTTTCTATACAAGAAAAGTGACGGAAT...CTCACAAAGCTGCTCATCGCGGAGGTGAAGAGCAGGCCTGGGAATAGCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGCCTCCATGACCTCATaGAAGCTCGTGTTTCCCATG +
Preference number: 5 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVASMTS*KLVFPM
Trigger: CATGGGAAACACGAGCTTCAATGAGGTCATGGAGGC...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CAA 90 bp GCACCCAGCAACTGGCAAGTTGAGATGTTAGTGGTTGATGATGGCTTAGGTGTAGACAGGAGGTCCCTGTaGCAAATGGCTGTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: APSNWQVEMLVVDDGLGVDRRSL*QMAVQS
Trigger: ACTCTGGACAGCCATTTGCAACAGGGACCTCCTGTC...TACACCTAAGCCATCATCAACCACTAACATCTCAACTTGCCAGTTGCTGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCAAAGTCCTGCCCATaGGCAAAGGCCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPKSCP*AKASST
Trigger: GGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGGCAGGGAAGCCTGGTaGGCGACTTTGACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKGREAW*ATLTAK
Trigger: TTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAGGCAGGGAAGCCTGGTaGGCGACTTTGACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: QANVGASDSTIWLGNIGEGREAW*ATLTAK
Trigger: TTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGTCCGAGAAGAGTTTTaGACTGGCAAGGGCGGGGGA +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKVREEF*TGKGGG
Trigger: TCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGAC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAAAAGTTGCACAGAACTaGCTGGGAGACTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVKVAQN*LGDSQS
Trigger: GGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTT...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CAA 90 bp GGCAGGGAAGCCTGGTTGGCGACTTTGACAGCCAAATGCAAGACGAGTTCTTCACTAGTCTTGCAAAAGTaGCACAGAACTTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GREAWLATLTAKCKTSSSLVLQK*HRTCWE
Trigger: CTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAG...TGAAGAACTCGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp AAATTACCCAGGAGTAGTCCACATGTAGAGGGAAGGCAAAGGTCCCCGCCTGGGAGCAAGGAGCTAGTCTaGCAAAAGTTGCACAGAACT +
Preference number: 5 (lower is better)
Translates to: KLPRSSPHVEGRQRSPPGSKELV*QKLHRT
Trigger: AGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCT...CCCAGGCGGGGACCTTTGCCTTCCCTCTACATGTGGACTACTCCTGGGTAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp GGCCAGCAAGGAGCTAGTCTTGCAAAAGTTGCACAGAACTTGCTGGGAGACTCCAGTACAGCATGCATGTaGACCAGCCAGAATGGATGT +
Preference number: 5 (lower is better)
Translates to: GQQGASLAKVAQNLLGDSSTACM*TSQNGC
Trigger: ACATCCATTCTGGCTGGTCAACATGCATGCTGTACT...GGAGTCTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618240.4
ENST00000635693.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTGGCTCTCCCCGGCTTaGAGCAGATACTCACACATG +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKWLSPA*SRYSHM
Trigger: CATGTGTGAGTATCTGCTCAAAGCCGGGGAGAGCCA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp GGACCACCCCTGCAGGGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACATTCCGTCACTTTTCTaGTATAGAAAGCCCACTTTC +
Preference number: 5 (lower is better)
Translates to: GPPLQGPCLTRVVSEVPNIPSLF*YRKPTF
Trigger: GAAAGTGGGCTTTCTATACAAGAAAAGTGACGGAAT...GTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCCCTGCAGGGGTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CAA 90 bp CCACCGTTCTGGATGATGAAATCCACCAGAGGCAGGGAAGCCTGGTTGGCGACTATTCCGTCACTTTTCTaGTATAGAAAGCCCACTTTC +
Preference number: 5 (lower is better)
Translates to: PPFWMMKSTRGREAWLATIPSLF*YRKPTF
Trigger: GAAAGTGGGCTTTCTATACAAGAAAAGTGACGGAAT...AGTCGCCAACCAGGCTTCCCTGCCTCTGGTGGATTTCATCATCCAGAACGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp TCAGCTGCCCCTTCATCAGACTGTCCAGGGGGAAAGAGACAATGTTGTTCAAGTGTCAGGCAGCCATACTaGACTCCACACTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: SAAPSSDCPGGKRQCCSSVRQPY*TPHFLF
Trigger: GAAAAGGAAGTGTGGAGTCAAGTATGGCTGCCTGAC...ACTTGAACAACATTGTCTCTTTCCCCCTGGACAGTCTGATGAAGGGGCAGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGGCCTCCATGACCTCATaGAAGCTCGTGTTTCCCATG +
Preference number: 5 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVASMTS*KLVFPM
Trigger: CATGGGAAACACGAGCTTCAATGAGGTCATGGAGGC...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGACAGGAGGTCCCTGTaGCAAATGGCTGTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKDRRSL*QMAVQS
Trigger: ACTCTGGACAGCCATTTGCAACAGGGACCTCCTGTC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp CAGGCAAATGTGGGTGCATCTGACTCTACAATTTGGCTGGGGAATATAGGAGAAGCCTGGTTGGCGACTTaGACAGCCAAATGCAAGACG +
Preference number: 5 (lower is better)
Translates to: QANVGASDSTIWLGNIGEAWLAT*TAKCKT
Trigger: CGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGC...TTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGATGCACCCACATTTGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGCCTGGTTGGCGACTTaGACAGCCAAATGCAAGACG +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKAWLAT*TAKCKT
Trigger: CGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGCTCCTCACACTCCTaGTGGTGCTTCTTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSSSHS*WCFFLA
Trigger: AGCCAGGAAGAAGCACCACAAGGAGTGTGAGGAGCT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTCCACTGGCATGTCTaGCACACCCTTGGACCAAAG +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLHWHV*HTLGPK
Trigger: CTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTCTAGTCTTGCAAAAGTaGCACAGAACTTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RYKPAESRAMPWNLTLPILVLQK*HRTCWE
Trigger: CTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAG...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AGGTATAAACCAGCTGAGTCCAGAGCCATGCCCTGGAATCTGACCCTGCCTATTAGTACAGCATGCATGTaGACCAGCCAGAATGGATGT +
Preference number: 5 (lower is better)
Translates to: RYKPAESRAMPWNLTLPISTACM*TSQNGC
Trigger: ACATCCATTCTGGCTGGTCAACATGCATGCTGTACT...AATAGGCAGGGTCAGATTCCAGGGCATGGCTCTGGACTCAGCTGGTTTATACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTTCTCCCCTGCTTGGCTaGGCCCATTCCTGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: YFYLTASTACMLTSQNGCSPLLG*AHSCQG
Trigger: GCCCTGGCAGGAATGGGCCAAGCCAAGCAGGGGAGA...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGTCTCTGCAGGATGGCTaGGTCTCCTTCCAAGATCTC +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSLQDG*VSFQDL
Trigger: GAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGA...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000618240.4
ENST00000634561.2
ENST00000635198.1
ENST00000635693.1
CDS-3UTR CAA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGTTCTCCAGCTGTTTTTaGGAATCCTGTCGACCGTCC +
Preference number: 5 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVFSSCF*ESCRPS
Trigger: GGACGGTCGACAGGATTCCAAAAAACAGCTGGAGAA...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGCCTTCCAGCCATCTaGGAAAAAGTTGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSLPAI*EKVVLG
Trigger: GCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGCT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTAGCCTTCCAGCCATCTaGGAAAAAGTTGTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCSLPAI*EKVVLG
Trigger: GCCCAGCACAACTTTTTCCAAGATGGCTGGAAGGCT...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336689.8
ENST00000634561.2
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGCCTCCATGACCTCATaGAAGCTCGTGTTTCCCATG +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKASMTS*KLVFPM
Trigger: CATGGGAAACACGAGCTTCAATGAGGTCATGGAGGC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAAAGTTGCACAGAACTaGCTGGGAGACTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKKVAQN*LGDSQS
Trigger: GGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CAA 90 bp GATAGGAAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTACTAGTCTTGCAAAAGTaGCACAGAACTTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: DRKEPPSVLTGKGHVSLVLVLQK*HRTCWE
Trigger: CTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAG...TACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTTCCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000336689.8
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CAA 90 bp TGGCTATGTCCAGAGCTGTCTCGCCTGCTTCATTTACTGTGCCAACCAAAGCTCAGCAAGGAGCTAGTCTaGCAAAAGTTGCACAGAACT +
Preference number: 5 (lower is better)
Translates to: WLCPELSRLLHLLCQPKLSKELV*QKLHRT
Trigger: AGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCT...GAGCTTTGGTTGGCACAGTAAATGAAGCAGGCGAGACAGCTCTGGACATAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000492982.6
ENST00000634705.1
CDS-3UTR CAA 90 bp GGCCCTTGTCTTACTCGTGTGGTATCTGAAGTGCCTAACACAGGTCCAGACATAAGTACAGCATGCATGTaGACCAGCCAGAATGGATGT +
Preference number: 5 (lower is better)
Translates to: GPCLTRVVSEVPNTGPDISTACM*TSQNGC
Trigger: ACATCCATTCTGGCTGGTCAACATGCATGCTGTACT...TATGTCTGGACCTGTGTTAGGCACTTCAGATACCACACGAGTAAGACAAGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTGGGACAGGTGGCTGTaGCCTAAGGATTCCACGGCC +
Preference number: 5 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMWDRWL*PKDSTA
Trigger: GGCCGTGGAATCCTTAGGCAACAGCCACCTGTCCCA...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000618240.4
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCCATCTTGGAAAAAGTaGTGCTGGGCGTGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKPSWKK*CWAWKN
Trigger: GTTCTTCCACGCCCAGCACAACTTTTTCCAAGATGG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGGTCAGGCAGCCATACTaGACTCCACACTTCCTTTTC +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKVRQPY*TPHFLF
Trigger: GAAAAGGAAGTGTGGAGTCAAGTATGGCTGCCTGAC...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGATGTCTTGCACACCCTaGGACCAAAGTCCGAGAAGA +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKMSCTP*DQSPRR
Trigger: TCTTCTCGGACTTTGGTCCAAGGGTGTGCAAGACAT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS CCA 90 bp GTTTATCTGTGGGAATTTAGGGGCGGAGGATGTATGCATTACCTCTaGCCCTCCACATTCTTTAGGCCTCCATTTCCCACTCTGTTAAAT +
Preference number: 5 (lower is better)
Translates to: VYLWEFRGGGCMHYL*PSTFFRPPFPTLLN
Trigger: ATTTAACAGAGTGGGAAATGGAGGCCTAAAGAATGTGGAGGGCCAGAGGTAATGCATACATCCTCCGCCCCTAAATTCCCACAGATAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530874.1
ENST00000635442.1
CDS-3UTR CAA 90 bp AAAGAACCGCCATCAGTCCTAACAGGGAAAGGCCATGTGTCCTTGGTAGAGGCAATTCCGTCACTTTTCTaGTATAGAAAGCCCACTTTC +
Preference number: 5 (lower is better)
Translates to: KEPPSVLTGKGHVSLVEAIPSLF*YRKPTF
Trigger: GAAAGTGGGCTTTCTATACAAGAAAAGTGACGGAAT...TGCCTCTACCAAGGACACATGGCCTTTCCCTGTTAGGACTGATGGCGGTTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
CDS-3UTR CAA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACGGCAGGGAAGCCTGGTaGGCGACTTTGACAGCCAAA +
Preference number: 5 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNGREAW*ATLTAK
Trigger: TTTGGCTGTCAAAGTCGCCAACCAGGCTTCCCTGCC...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGCTAGTCTTGCAAAAGTaGCACAGAACTTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKLVLQK*HRTCWE
Trigger: CTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAG...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CAA 90 bp TCTGACTCTACAATTTGGCTGGGGAATATAGGAGAATGCCTAGGGAAGGCTGTGAGCAAGGAGCTAGTCTaGCAAAAGTTGCACAGAACT +
Preference number: 5 (lower is better)
Translates to: SDSTIWLGNIGECLGKAVSKELV*QKLHRT
Trigger: AGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCT...CACAGCCTTCCCTAGGCATTCTCCTATATTCCCCAGCCAAATTGTAGAGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGTACAGCATGCATGTaGACCAGCCAGAATGGATGT +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSTACM*TSQNGC
Trigger: ACATCCATTCTGGCTGGTCAACATGCATGCTGTACT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAAAGTCCTGCCCATaGGCAAAGGCCTCCAGTACC +
Preference number: 5 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQPKSCP*AKASST
Trigger: GGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGG...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTGCCTGGTTGGCGACTTaGACAGCCAAATGCAAGACG +
Preference number: 5 (lower is better)
Translates to: YFYLTASTACMLTSQNGCAWLAT*TAKCKT
Trigger: CGTCTTGCATTTGGCTGTCAAAGTCGCCAACCAGGC...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGGTCCGAGAAGAGTTTTaGACTGGCAAGGGCGGGGGA +
Preference number: 5 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQVREEF*TGKGGG
Trigger: TCCCCCGCCCTTGCCAGTCAAAAACTCTTCTCGGAC...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTCTCCACTGGCATGTCTaGCACACCCTTGGACCAAAG +
Preference number: 5 (lower is better)
Translates to: YFYLTASTACMLTSQNGCLHWHV*HTLGPK
Trigger: CTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAG...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGAGCAAGGAGCTAGTCTaGCAAAAGTTGCACAGAACT +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKSKELV*QKLHRT
Trigger: AGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000465372.5
ENST00000492982.6
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635461.1
ENST00000635693.1
CDS-3UTR CAA 90 bp AACAAGTCTGAGATGAATGAAACCAGACACTGGGGGCTCAAAAGACAACCCTGTAGCAAGGAGCTAGTCTaGCAAAAGTTGCACAGAACT +
Preference number: 5 (lower is better)
Translates to: NKSEMNETRHWGLKRQPCSKELV*QKLHRT
Trigger: AGTTCTGTGCAACTTTTGCAAGACTAGCTCCTTGCT...ACAGGGTTGTCTTTTGAGCCCCCAGTGTCTGGTTTCATTCATCTCAGACTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp GTGACATTCAGAATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCTCCACTGGCATGTCTaGCACACCCTTGGACCAAAG +
Preference number: 5 (lower is better)
Translates to: VTFRIFLFNSQYSMHVDQLHWHV*HTLGPK
Trigger: CTTTGGTCCAAGGGTGTGCAAGACATGCCAGTGGAG...CTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATATTCTGAATGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000634513.1
ENST00000634561.2
CDS-3UTR CAA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGAAAGTTGCACAGAACTaGCTGGGAGACTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMKVAQN*LGDSQS
Trigger: GGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTT...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp GGAAGGCTGTGCTGTCCCTCAAAAGGAGTGACATTCAGAATATTTTTATTTAACAAAGTTGCACAGAACTaGCTGGGAGACTCCCAGTCC +
Preference number: 5 (lower is better)
Translates to: GRLCCPSKGVTFRIFLFNKVAQN*LGDSQS
Trigger: GGACTGGGAGTCTCCCAGCAAGTTCTGTGCAACTTT...GTTAAATAAAAATATTCTGAATGTCACTCCTTTTGAGGGACAGCACAGCCTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp AGAGTGAGATCCAAGAGAACAAATGTCTCAGCTCCCCAGTTTTGTGAGCTCAAGATTCCGTCACTTTTCTaGTATAGAAAGCCCACTTTC +
Preference number: 5 (lower is better)
Translates to: RVRSKRTNVSAPQFCELKIPSLF*YRKPTF
Trigger: GAAAGTGGGCTTTCTATACAAGAAAAGTGACGGAAT...CTTGAGCTCACAAAACTGGGGAGCTGAGACATTTGTTCTCTTGGATCTCACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000492982.6
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS-3UTR CAA 90 bp ATATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGCTAGTCTTGCAAAAGTaGCACAGAACTTGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: IFLFNSQYSMHVDQPEWMLVLQK*HRTCWE
Trigger: CTCCCAGCAAGTTCTGTGCAACTTTTGCAAGACTAG...CATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS-3UTR CAA 90 bp TATTTTTATTTAACAGCCAGTACAGCATGCATGTTGACCAGCCAGAATGGATGTAGTACAGCATGCATGTaGACCAGCCAGAATGGATGT +
Preference number: 5 (lower is better)
Translates to: YFYLTASTACMLTSQNGCSTACM*TSQNGC
Trigger: ACATCCATTCTGGCTGGTCAACATGCATGCTGTACT...ACATCCATTCTGGCTGGTCAACATGCATGCTGTACTGGCTGTTAAATAAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000336689.8
ENST00000495646.5
ENST00000618240.4
ENST00000634513.1
ENST00000634561.2
ENST00000635693.1
CDS GCA 72 bp TCCGCGGTGACGGCCAGGAACTCGGCGACGCTGAACTaGTCCGGCATGGCGGGCGCGAGCGTGGAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: SAVTARNSATLN*SGMAGASVELP
Trigger: CGGCAGCTCCACGCTCGCGCCCGCCATGCCGGAGCAGTTCAGCGTCGCCGAGTTCCTGGCCGTCACCGCGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000478858.5
ENST00000492982.6
ENST00000634459.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
CDS GCA 72 bp TCCGCGGTGACGGCCAGGAACTCGGCGACGCTGAACTaGTCCGGCATGGCGGGCGCGAGCGTGGAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: SAVTARNSATLN*SGMAGASVEPW
Trigger: CCAGGGCTCCACGCTCGCGCCCGCCATGCCGGAGCAGTTCAGCGTCGCCGAGTTCCTGGCCGTCACCGCGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000608765.1
ENST00000618240.4
ENST00000634548.1
ENST00000635693.1
CDS CAA 90 bp GGGATCCCTCCTGTCACCCTGGCCCGATCGCGCTCCTTCTCCAGCTaGGCCCTAGACCCCAAGGAAAGAGAAGCCTGTCGACCGTCCCTC +
Preference number: 6 (lower is better)
Translates to: GIPPVTLARSRSFSS*ALDPKEREACRPSL
Trigger: GAGGGACGGTCGACAGGCTTCTCTTTCCTTGGGGTCTAGGGCCAAGCTGGAGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437606.6
ENST00000635198.1
CDS GCA 72 bp GGGATAGTTCAGGGGCTGACCTCTCTGCTCTCAAGCTaGAGTGTCCCTCGGAGGGAGTCCCGGAGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: GIVQGLTSLLSS*SVPRRESRSWV
Trigger: GACCCAGCTCCGGGACTCCCTCCGAGGGACACTGCAGCTTGAGAGCAGAGAGGTCAGCCCCTGAACTATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478858.5
ENST00000634459.1
CDS CCA 72 bp GGATCCCCAGGTTCCCAGGGATCCCTCCTGTCACCCTaGCCCGATCGCGCTCCTTCTCCAGCTTGGCCATTT +
Preference number: 6 (lower is better)
Translates to: GSPGSQGSLLSP*PDRAPSPAWPF
Trigger: AAATGGCCAAGCTGGAGAAGGAGCGCGATCGGGCCAGGGTGACAGGAGGGATCCCTGGGAACCTGGGGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618240.4
ENST00000635693.1
CDS CCA 72 bp GAGGCCGCCAGCTTCTCGATGAAGGGGAACAGGCTCTaGGCAGCCTTCCAGCCATTTGTGCTGGGCGTGGAA +
Preference number: 6 (lower is better)
Translates to: EAASFSMKGNRL*AAFQPFVLGVE
Trigger: TTCCACGCCCAGCACAAATGGCTGGAAGGCTGCCCAGAGCCTGTTCCCCTTCATCGAGAAGCTGGCGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000478858.5
ENST00000634459.1
CDS CAA 90 bp ACCTGTGCATCAGGCCCTGGCAGCGGCTGTCCAAAGTCCTGCCCATaGGCAAAGGCCTCCAGTACCGACAGGAGGTCCCTGTTGCAAATG +
Preference number: 6 (lower is better)
Translates to: TCASGPGSGCPKSCP*AKASSTDRRSLLQM
Trigger: CATTTGCAACAGGGACCTCCTGTCGGTACTGGAGGCCTTTGCCAATGGGCAGGACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS GCA 72 bp TGGGTTATAAGTGGCCCTTGGAGGGGTTCTCACCTGTaGATCAGGCCCTGGCAGCGGCTGTCCAAAGTCCTG +
Preference number: 6 (lower is better)
Translates to: WVISGPWRGSHL*IRPWQRLSKVL
Trigger: CAGGACTTTGGACAGCCGCTGCCAGGGCCTGATGCACAGGTGAGAACCCCTCCAAGGGCCACTTATAACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS CAA 90 bp GGTTTAGGGCCGCCGTGTGAGGGTAGCTGGGCCTCCATGACCTCATaGAAGCTCGTGTTTCCCATGTTCAAGGCCAGCTGGAGTCGTAGG +
Preference number: 6 (lower is better)
Translates to: GLGPPCEGSWASMTS*KLVFPMFKASWSRR
Trigger: CCTACGACTCCAGCTGGCCTTGAACATGGGAAACACGAGCTTCAATGAGGTCATGGAGGCCCAGCTACCCTCACACGGCGGCCCTAAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495646.5
ENST00000634513.1
CDS GCA 72 bp GGAGACTTCAGAACGATTCTCGCCCTGAGGGGTGGCTaGTCCCAGGCTGGCGACAGTCTCATAGGTCTTGTT +
Preference number: 6 (lower is better)
Translates to: GDFRTILALRGG*SQAGDSLIGLV
Trigger: AACAAGACCTATGAGACTGTCGCCAGCCTGGGAGCAGCCACCCCTCAGGGCGAGAATCGTTCTGAAGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465372.5
ENST00000635461.1
CDS CCA 72 bp GCCCGCACAGCCTTCTTTATTCTCTGCAGGATGGCTTaGTCTCCTTCCAAGATCGGGGCATCTTGGCGGCGA +
Preference number: 6 (lower is better)
Translates to: ARTAFFILCRMA*SPSKIGASWRR
Trigger: TCGCCGCCAAGATGCCCCGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGCTGTGCGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478858.5
ENST00000492982.6
ENST00000634459.1
ENST00000634705.1
CDS CAA 72 bp TGCCCGCACAGCCTTCTTTATTCTCTGCAGGATGGCTaGGTCTCCTTCCAAGATCGGGGCATCTTGGCGGCG +
Preference number: 6 (lower is better)
Translates to: CPHSLLYSLQDG*VSFQDRGILAA
Trigger: CGCCGCCAAGATGCCCCGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGCTGTGCGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478858.5
ENST00000492982.6
ENST00000634459.1
ENST00000634705.1
CDS CCA 72 bp CAGCAGGGTCAGCTTCACCGGGGGCCGGTTTATCTGTaGGAATTTAGGGGCGGAGGATGTATGCATTACCTC +
Preference number: 6 (lower is better)
Translates to: QQGQLHRGPVYL*EFRGGGCMHYL
Trigger: GAGGTAATGCATACATCCTCCGCCCCTAAATTCCCACAGATAAACCGGCCCCCGGTGAAGCTGACCCTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530874.1
ENST00000635442.1
CDS CAA 90 bp AGAAGAACTGGGGAATATGTTAGACAGGTGGGTTATAAGTGGCCCTaGGAGGGGTTCTCACCTGTGCATCAGGCCCTGGCAGCGGCTGTC +
Preference number: 6 (lower is better)
Translates to: RRTGEYVRQVGYKWP*EGFSPVHQALAAAV
Trigger: GACAGCCGCTGCCAGGGCCTGATGCACAGGTGAGAACCCCTCCAAGGGCCACTTATAACCCACCTGTCTAACATATTCCCCAGTTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS CAA 72 bp GGGGAATATGTTAGACAGGTGGGTTATAAGTGGCCCTaGGAGGGGTTCTCACCTGTGCATCAGGCCCTGGCA +
Preference number: 6 (lower is better)
Translates to: GEYVRQVGYKWP*EGFSPVHQALA
Trigger: TGCCAGGGCCTGATGCACAGGTGAGAACCCCTCCAAGGGCCACTTATAACCCACCTGTCTAACATATTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS GCA 72 bp TTCATTCTCCACATGGCCAAGGCCGGAGCTATGGATTaGCCGCACAGCCTTCTTTATTCTCTGCAGGATGGC +
Preference number: 6 (lower is better)
Translates to: FILHMAKAGAMD*PHSLLYSLQDG
Trigger: GCCATCCTGCAGAGAATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGGCCATGTGGAGAATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000449467.2
ENST00000478858.5
ENST00000492982.6
ENST00000608765.1
ENST00000618240.4
ENST00000634459.1
ENST00000634548.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635351.1
ENST00000635693.1
CDS GCA 72 bp GAGCTATGGATTGCCCGCACAGCCTTCTTTATTCTCTaGAGGATGGCTTGGTCTCCTTCCAAGATCGGGGCA +
Preference number: 6 (lower is better)
Translates to: ELWIARTAFFIL*RMAWSPSKIGA
Trigger: TGCCCCGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGCTGTGCGGGCAATCCATAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478858.5
ENST00000492982.6
ENST00000634459.1
ENST00000634705.1
CDS CCA 72 bp TGCTCTTCATTCTCCACATGGCCAAGGCCGGAGCTATaGATTGCCCGCACAGCCTTCTTTATTCTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: CSSFSTWPRPEL*IARTAFFILCR
Trigger: CCTGCAGAGAATAAAGAAGGCTGTGCGGGCAATCCATAGCTCCGGCCTTGGCCATGTGGAGAATGAAGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000336689.8
ENST00000437606.6
ENST00000449467.2
ENST00000478858.5
ENST00000492982.6
ENST00000608765.1
ENST00000618240.4
ENST00000634459.1
ENST00000634548.1
ENST00000634561.2
ENST00000634705.1
ENST00000635198.1
ENST00000635351.1
ENST00000635693.1
CDS CCA 72 bp GCCCGCACAGCCTTCTTTATTCTCTGCAGGATGGCTTaGTCTCCTTCCAAGATCTCTGGGGAGAATACAGGG +
Preference number: 6 (lower is better)
Translates to: ARTAFFILCRMA*SPSKISGENTG
Trigger: CCCTGTATTCTCCCCAGAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGCTGTGCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449467.2
ENST00000635351.1
CDS TCA 72 bp CATTTGTGCTGGGCGTGGAAGAACTTGATGAGGCTCTaGAGGAAGTCAGGACCTTGCTTCATCTGGCTCTCC +
Preference number: 6 (lower is better)
Translates to: HLCWAWKNLMRL*RKSGPCFIWLS
Trigger: GGAGAGCCAGATGAAGCAAGGTCCTGACTTCCTTCAGAGCCTCATCAAGTTCTTCCACGCCCAGCACAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478858.5
ENST00000634459.1
CDS CCA 72 bp AGAACTGGGGAATATGTTAGACAGGTGGGTTATAAGTaGCCCTTGGAGGGGTTCTCACCTGTGCATCAGGCC +
Preference number: 6 (lower is better)
Translates to: RTGEYVRQVGYK*PLEGFSPVHQA
Trigger: GGCCTGATGCACAGGTGAGAACCCCTCCAAGGGCCACTTATAACCCACCTGTCTAACATATTCCCCAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484418.1
ENST00000635167.1
CDS CAA 72 bp TGCCCGCACAGCCTTCTTTATTCTCTGCAGGATGGCTaGGTCTCCTTCCAAGATCTCTGGGGAGAATACAGG +
Preference number: 6 (lower is better)
Translates to: CPHSLLYSLQDG*VSFQDLWGEYR
Trigger: CCTGTATTCTCCCCAGAGATCTTGGAAGGAGACCAAGCCATCCTGCAGAGAATAAAGAAGGCTGTGCGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000449467.2
ENST00000635351.1
CDS GCA 72 bp CGGTTTATCTGTGGGAATTTAGGGGCGGAGGATGTATaGATTACCTCTGGCCCTCCACATTCTTTAGGCCTC +
Preference number: 6 (lower is better)
Translates to: RFICGNLGAEDV*ITSGPPHSLGL
Trigger: GAGGCCTAAAGAATGTGGAGGGCCAGAGGTAATGCATACATCCTCCGCCCCTAAATTCCCACAGATAAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530874.1
ENST00000635442.1
CDS CCA 72 bp TGGGAATTTAGGGGCGGAGGATGTATGCATTACCTCTaGCCCTCCACATTCTTTAGGCCTCCATTTCCCACT +
Preference number: 6 (lower is better)
Translates to: WEFRGGGCMHYL*PSTFFRPPFPT
Trigger: AGTGGGAAATGGAGGCCTAAAGAATGTGGAGGGCCAGAGGTAATGCATACATCCTCCGCCCCTAAATTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530874.1
ENST00000635442.1