Pregenerated sensors for ARSF (Homo sapiens)

Ensembl gene IDs: ENSG00000062096

Ensembl transcript IDs: ENST00000359361.2, ENST00000381127.6

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GCTTCCTTCACCATAATGGATCCAGCTCGTTCAGCCTTCATGGGCTaGTCCGTGATCTCGTGCCCCCGCATGAGGAGGCAGTCCCAGTAT	+
Preference number: 5 (lower is better) Translates to: ASFTIMDPARSAFMG*SVISCPRMRRQSQY Trigger: ATACTGGGACTGCCTCCTCATGCGGGGGCACGAGATCACGGAGCAGCCCATGAAGGCTGAACGAGCTGGATCCATTATGGTGAAGGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6
CDS TCA 90 bp	AGGGTGAGGATGGCAATGGCAACTAGCTGCACACAGAGCCAGAGCTaGCTCTCAAAGGCTAATTCCGTGTTACGAGAGGGGTCCGGCCAG	+
Preference number: 5 (lower is better) Translates to: RVRMAMATSCTQSQS*LSKANSVLREGSGQ Trigger: CTGGCCGGACCCCTCTCGTAACACGGAATTAGCCTTTGAGAGTCAGCTCTGGCTCTGTGTGCAGCTAGTTGCCATTGCCATCCTCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6
CDS TCA 90 bp	ATTCCGTGTTACGAGAGGGGTCCGGCCAGCAGCTGTCAACGAGAGTaGACGGCATGCCATAGTAGTAGTCAAACCCATAATTATATGGAT	+
Preference number: 5 (lower is better) Translates to: IPCYERGPASSCQRE*TACHSSSQTHNYMD Trigger: ATCCATATAATTATGGGTTTGACTACTACTATGGCATGCCGTTCACTCTCGTTGACAGCTGCTGGCCGGACCCCTCTCGTAACACGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6
CDS CCA 90 bp	GAGAGTGAACGGCATGCCATAGTAGTAGTCAAACCCATAATTATATaGATGGTGGCACTGGTCACTTCGGGAGTCGCAGTTCAAGCCTTG	+
Preference number: 5 (lower is better) Translates to: ESERHAIVVVKPIII*MVALVTSGVAVQAL Trigger: CAAGGCTTGAACTGCGACTCCCGAAGTGACCAGTGCCACCATCCATATAATTATGGGTTTGACTACTACTATGGCATGCCGTTCACTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6
CDS TCA 90 bp	TTCTTGTTGTCAGTTTATACAAACAAAAAGGTTGGATCCCAACAGTaGCTTCTATCTCAACAGCAGTGGAAAAGTAACAGAAGGGCCAGG	+
Preference number: 5 (lower is better) Translates to: FLLSVYTNKKVGSQQ*LLSQQQWKSNRRAR Trigger: CCTGGCCCTTCTGTTACTTTTCCACTGCTGTTGAGATAGAAGTCACTGTTGGGATCCAACCTTTTTGTTTGTATAAACTGACAACAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381127.6
CDS GCA 72 bp	ACCATAATGGATCCAGCTCGTTCAGCCTTCATGGGCTaGTCCGTGATCTCGTGCCCCCGCATGAGGAGGCAG	+
Preference number: 6 (lower is better) Translates to: TIMDPARSAFMG*SVISCPRMRRQ Trigger: CTGCCTCCTCATGCGGGGGCACGAGATCACGGAGCAGCCCATGAAGGCTGAACGAGCTGGATCCATTATGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6
CDS TCA 72 bp	CAGAGACCCAGCCGCTCAGCTTCCCAAAGGTTAGGGTaGGGATGGCAATGGCAACTAGCTGCACACAGAGCC	+
Preference number: 6 (lower is better) Translates to: QRPSRSASQRLG*GWQWQLAAHRA Trigger: GGCTCTGTGTGCAGCTAGTTGCCATTGCCATCCTCACCCTAACCTTTGGGAAGCTGAGCGGCTGGGTCTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6
CDS TCA 72 bp	CATTATCCCCATACAAGCCATGCTTGCTGGTGCCAGTaGAATCGTCCGTGGTGGGGAGAGGTGTGTGCACGT	+
Preference number: 6 (lower is better) Translates to: HYPHTSHACWCQ*NRPWWGEVCAR Trigger: ACGTGCACACACCTCTCCCCACCACGGACGATTTCACTGGCACCAGCAAGCATGGCTTGTATGGGGATAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6
CDS TCA 72 bp	TACGAGAGGGGTCCGGCCAGCAGCTGTCAACGAGAGTaGACGGCATGCCATAGTAGTAGTCAAACCCATAAT	+
Preference number: 6 (lower is better) Translates to: YERGPASSCQRE*TACHSSSQTHN Trigger: ATTATGGGTTTGACTACTACTATGGCATGCCGTTCACTCTCGTTGACAGCTGCTGGCCGGACCCCTCTCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6
CDS TCA 72 bp	ATGGCAATGGCAACTAGCTGCACACAGAGCCAGAGCTaGCTCTCAAAGGCTAATTCCGTGTTACGAGAGGGG	+
Preference number: 6 (lower is better) Translates to: MAMATSCTQSQS*LSKANSVLREG Trigger: CCCCTCTCGTAACACGGAATTAGCCTTTGAGAGTCAGCTCTGGCTCTGTGTGCAGCTAGTTGCCATTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6
CDS GCA 72 bp	CAAGGCTGCAAGTGTTGTCTCATTAAGAGGGAGGCCTaGGGGGACTGCAAGATTTTGGATGACACGTCTATT	+
Preference number: 6 (lower is better) Translates to: QGCKCCLIKREA*GDCKILDDTSI Trigger: AATAGACGTGTCATCCAAAATCTTGCAGTCCCCGCAGGCCTCCCTCTTAATGAGACAACACTTGCAGCCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6
CDS CCA 72 bp	CGGCATGCCATAGTAGTAGTCAAACCCATAATTATATaGATGGTGGCACTGGTCACTTCGGGAGTCGCAGTT	+
Preference number: 6 (lower is better) Translates to: RHAIVVVKPIII*MVALVTSGVAV Trigger: AACTGCGACTCCCGAAGTGACCAGTGCCACCATCCATATAATTATGGGTTTGACTACTACTATGGCATGCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6
CDS CAA 72 bp	CTCATTAAGAGGGAGGCCTGCGGGGACTGCAAGATTTaGGATGACACGTCTATTACCACTAGAAACCATACC	+
Preference number: 6 (lower is better) Translates to: LIKREACGDCKI*DDTSITTRNHT Trigger: GGTATGGTTTCTAGTGGTAATAGACGTGTCATCCAAAATCTTGCAGTCCCCGCAGGCCTCCCTCTTAATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6
CDS GCA 72 bp	TGGTGCCATTTGCCTATAAGCCCCGTGCTGTATCCTTaGTTCTTTAGCAAGGCTGCAAGTGTTGTCTCATTA	+
Preference number: 6 (lower is better) Translates to: WCHLPISPVLYP*FFSKAASVVSL Trigger: TAATGAGACAACACTTGCAGCCTTGCTAAAGAAGCAAGGATACAGCACGGGGCTTATAGGCAAATGGCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6
CDS CCA 72 bp	TCATTAAGAGGGAGGCCTGCGGGGACTGCAAGATTTTaGATGACACGTCTATTACCACTAGAAACCATACCT	+
Preference number: 6 (lower is better) Translates to: SLRGRPAGTARF*MTRLLPLETIP Trigger: AGGTATGGTTTCTAGTGGTAATAGACGTGTCATCCAAAATCTTGCAGTCCCCGCAGGCCTCCCTCTTAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000359361.2 ENST00000381127.6