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Pregenerated sensors for ARPC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000111229

Ensembl transcript IDs: ENST00000467622.2, ENST00000471641.1, ENST00000475777.2

Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp CAACCCAGAGGAGCAGGATCCAGGTACAGCGGAGCGCTTCCGGTCTaGCAGCCTGGGCGAGGTAGGCGGAAGCGAAACGGAAGGGGCGGG +
Preference number: 5 (lower is better)
Translates to: QPRGAGSRYSGALPV*QPGRGRRKRNGRGG
Trigger: CCCGCCCCTTCCGTTTCGCTTCCGCCTACCTCGCCCAGGCTGCCAGACCGGAAGCGCTCCGCTGTACCTGGATCCTGCTCCTCTGGGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475777.2
CDS GCA 90 bp TGGCAGCCTGGGCGAGGTAGGCGGAAGCGAAACGGAAGGGGCGGGTaGGGACGTGGAGCTTCCGGCCTTGCAGTTCCGCTTCTGGTTGCA +
Preference number: 5 (lower is better)
Translates to: WQPGRGRRKRNGRGG*GRGASGLAVPLLVA
Trigger: TGCAACCAGAAGCGGAACTGCAAGGCCGGAAGCTCCACGTCCGCACCCGCCCCTTCCGTTTCGCTTCCGCCTACCTCGCCCAGGCTGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475777.2
CDS TCA 90 bp CAAAATCCCAGGGTCTTGATATCTGGCAGTTGGTTTCAGCAGTGCTaGGACAGTTACTTATACTTCTTGTCTATGACTGTTAACGTTCTC +
Preference number: 5 (lower is better)
Translates to: QNPRVLISGSWFQQC*DSYLYFLSMTVNVL
Trigger: GAGAACGTTAACAGTCATAGACAAGAAGTATAAGTAACTGTCTCAGCACTGCTGAAACCAACTGCCAGATATCAAGACCCTGGGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471641.1
CDS TCA 90 bp AAACATAACAATGATGTGCAATGTATGCATTCCATCTTTGTCTTCTaGTTATCTGCTGAATGCAGTGGTAGGACAGCCACTATCACATCA +
Preference number: 5 (lower is better)
Translates to: KHNNDVQCMHSIFVF*LSAECSGRTATITS
Trigger: TGATGTGATAGTGGCTGTCCTACCACTGCATTCAGCAGATAATCAGAAGACAAAGATGGAATGCATACATTGCACATCATTGTTATGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467622.2
CDS GCA 72 bp GGGCGAGGTAGGCGGAAGCGAAACGGAAGGGGCGGGTaGGGACGTGGAGCTTCCGGCCTTGCAGTTCCGCTT +
Preference number: 6 (lower is better)
Translates to: GRGRRKRNGRGG*GRGASGLAVPL
Trigger: AAGCGGAACTGCAAGGCCGGAAGCTCCACGTCCGCACCCGCCCCTTCCGTTTCGCTTCCGCCTACCTCGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475777.2
CDS CCA 72 bp GGAGCAGGATCCAGGTACAGCGGAGCGCTTCCGGTCTaGCAGCCTGGGCGAGGTAGGCGGAAGCGAAACGGA +
Preference number: 6 (lower is better)
Translates to: GAGSRYSGALPV*QPGRGRRKRNG
Trigger: TCCGTTTCGCTTCCGCCTACCTCGCCCAGGCTGCCAGACCGGAAGCGCTCCGCTGTACCTGGATCCTGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475777.2
CDS CAA 72 bp AGAGGGGTGGTAGGAAGTCAAATGGAGAAAATCTTCTaGTGTCACAGAGTGAGGATAGAGACCTGTTCTTAC +
Preference number: 6 (lower is better)
Translates to: RGVVGSQMEKIF*CHRVRIETCSY
Trigger: GTAAGAACAGGTCTCTATCCTCACTCTGTGACACAAGAAGATTTTCTCCATTTGACTTCCTACCACCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467622.2
CDS TCA 72 bp AGCAGTGCTGAGACAGTTACTTATACTTCTTGTCTATaGCTGTTAACGTTCTCGCACAGCAGAAATGCAAAG +
Preference number: 6 (lower is better)
Translates to: SSAETVTYTSCL*LLTFSHSRNAK
Trigger: CTTTGCATTTCTGCTGTGCGAGAACGTTAACAGTCATAGACAAGAAGTATAAGTAACTGTCTCAGCACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471641.1
CDS CAA 72 bp GGTAGCTCTAGACGGACAAAAGCCAGAAATACTGTCTaGACAAAGACAGATCTCATGACACAATTTGTTTGG +
Preference number: 6 (lower is better)
Translates to: GSSRRTKARNTV*TKTDLMTQFVW
Trigger: CCAAACAAATTGTGTCATGAGATCTGTCTTTGTCAAGACAGTATTTCTGGCTTTTGTCCGTCTAGAGCTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471641.1
CDS CAA 90 bp AGTTATCAAAACATAACAATGATGTGCAATGTATGCATTCCATCTTaGTCTTCTGATTATCTGCTGAATGCAGTGGTAGGACAGCCACTA +
Preference number: 6 (lower is better)
Translates to: SYQNITMMCNVCIPS*SSDYLLNAVVGQPL
Trigger: TAGTGGCTGTCCTACCACTGCATTCAGCAGATAATCAGAAGACAAAGATGGAATGCATACATTGCACATCATTGTTATGTTTTGATAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467622.2
CDS CAA 72 bp AAAACTGTATTTGCAAATACATCCCAAATGTACTGGTaGCAGCTCTGGATGCTCACTGTGGTAATACATTTT +
Preference number: 6 (lower is better)
Translates to: KTVFANTSQMYW*QLWMLTVVIHF
Trigger: AAAATGTATTACCACAGTGAGCATCCAGAGCTGCAACCAGTACATTTGGGATGTATTTGCAAATACAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467622.2
CDS CCA 72 bp TTTGCAAATACATCCCAAATGTACTGGTTGCAGCTCTaGATGCTCACTGTGGTAATACATTTTTATACATTT +
Preference number: 6 (lower is better)
Translates to: FANTSQMYWLQL*MLTVVIHFYTF
Trigger: AAATGTATAAAAATGTATTACCACAGTGAGCATCCAGAGCTGCAACCAGTACATTTGGGATGTATTTGCAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467622.2