RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGEF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000076928

Ensembl transcript IDs: ENST00000337665.8, ENST00000347545.8, ENST00000354532.8, ENST00000378152.8, ENST00000594044.1, ENST00000594258.1, ENST00000594417.1, ENST00000594513.1, ENST00000594521.5, ENST00000595723.5, ENST00000595770.1, ENST00000595897.5, ENST00000596957.1, ENST00000598587.1, ENST00000598812.5, ENST00000599589.5, ENST00000599846.5, ENST00000600274.5, ENST00000600387.5, ENST00000600517.1, ENST00000617585.1

Found 431 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGAGCTGGCCCTCGGGGCCTGGTCTGCAGAAGGGCAGGAGGTCACTaGGGATTCTCTCGGTCCGGGCATCAGCTGGAGACGTCTCTCGGC +
Preference number: 1 (lower is better)
Translates to: RAGPRGLVCRRAGGH*GFSRSGHQLETSLG
Trigger: GCCGAGAGACGTCTCCAGCTGATGCCCGGACCGAGAGAATCCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
3UTR GCA 90 bp GGGTGGCCCCCACAGGCAATACTGAGATGGCCCGGGTCACCGTGGTaGCCTCCAGAATGGAGCCCTGAGTCCCCCAAGCAGAGGGCAGGA +
Preference number: 1 (lower is better)
Translates to: GWPPQAILRWPGSPW*PPEWSPESPKQRAG
Trigger: TCCTGCCCTCTGCTTGGGGGACTCAGGGCTCCATTCTGGAGGGCACCACGGTGACCCGGGCCATCTCAGTATTGCCTGTGGGGGCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000599846.5
3UTR CCA 90 bp GCTACCTTTCCGAAGGGCCGTGGCAGCGAGCTGGCCCTCGGGGCCTaGTCTGCAGAAGGGCAGGAGGTCACTGAGGATTCTCTCGGTCCG +
Preference number: 1 (lower is better)
Translates to: ATFPKGRGSELALGA*SAEGQEVTEDSLGP
Trigger: CGGACCGAGAGAATCCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAGGTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
3UTR CCA 90 bp CCCGGTTCCAGCGGGCGGCATCCAGGATGCTGCTCAGCCCCTTCTTaGTCTTGGCAGGCTCGTCCGACCGCCGGTTCCCCATCACCTTTT +
Preference number: 1 (lower is better)
Translates to: PGSSGRHPGCCSAPS*SWQARPTAGSPSPF
Trigger: AAAAGGTGATGGGGAACCGGCGGTCGGACGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCGCCCGCTGGAACCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
3UTR TCA 90 bp CCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTaGGATCCGACAGAGCTGTCCTGGCCCCTGAATATCCACCTGGGG +
Preference number: 1 (lower is better)
Translates to: PLSTSVSAPGRWWGW*DPTELSWPLNIHLG
Trigger: CCCCAGGTGGATATTCAGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR CCA 90 bp CAGGCAATACTGAGATGGCCCGGGTCACCGTGGTGCCCTCCAGAATaGAGCCCTGAGTCCCCCAAGCAGAGGGCAGGAGGGAGAGATGGC +
Preference number: 1 (lower is better)
Translates to: QAILRWPGSPWCPPE*SPESPKQRAGGRDG
Trigger: GCCATCTCTCCCTCCTGCCCTCTGCTTGGGGGACTCAGGGCTCCATTCTGGAGGGCACCACGGTGACCCGGGCCATCTCAGTATTGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000599846.5
3UTR CCA 90 bp TTCCTCCCCGACTTCTTGTCTCCACTCTTGGTCCGCACCCCAAGGTaGCGCATGTACAGGCCAATGGCGTTGACCACGGCAGCACTCTTT +
Preference number: 1 (lower is better)
Translates to: FLPDFLSPLLVRTPR*RMYRPMALTTAALF
Trigger: AAAGAGTGCTGCCGTGGTCAACGCCATTGGCCTGTACATGCGCCACCTTGGGGTGCGGACCAAGAGTGGAGACAAGAAGTCGGGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
3UTR TCA 90 bp AAACTTGAGGCTCGGGGATGTTTAGCGACTTGCCTGAGTGAGTGGTaGGCGGGAGTGAGGCTGAACCTTCTCTGTCAGGCAGGGCTGAAG +
Preference number: 1 (lower is better)
Translates to: KLEARGCLATCLSEW*AGVRLNLLCQAGLK
Trigger: CTTCAGCCCTGCCTGACAGAGAAGGTTCAGCCTCACTCCCGCTCACCACTCACTCAGGCAAGTCGCTAAACATCCCCGAGCCTCAAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR-3UTR CCA 90 bp GCGAGCTGGCCCTCGGGGCCTGGTCTGCAGAAGGGCAGGAGGTCACTGAGGATTGGTCCGGGCATCAGCTaGAGACGTCTCTCGGCCACC +
Preference number: 2 (lower is better)
Translates to: ASWPSGPGLQKGRRSLRIGPGIS*RRLSAT
Trigger: GGTGGCCGAGAGACGTCTCCAGCTGATGCCCGGACC...AATCCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAGCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
3UTR-3UTR TCA 90 bp AGCGAGCTGGCCCTCGGGGCCTGGTCTGCAGAAGGGCAGGAGGTCACTGAGGATCGTTCTCAGAGCTGCTaGGGAGGGGTTCTCGGGTGC +
Preference number: 2 (lower is better)
Translates to: SELALGAWSAEGQEVTEDRSQSC*GGVLGC
Trigger: GCACCCGAGAACCCCTCCTCAGCAGCTCTGAGAACG...ATCCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAGCTCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600517.1
3UTR-3UTR GCA 90 bp GCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGAAGCCTCCAGGGGCTaGCCAGGTGAGAGCTGCCTT +
Preference number: 2 (lower is better)
Translates to: ASQHLGLSTWALVGLVRSEASRG*PGESCL
Trigger: AAGGCAGCTCTCACCTGGGCAGCCCCTGGAGGCTTC...GGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
3UTR-3UTR CCA 90 bp CAGCGGGCGGCATCCAGGATGCTGCTCAGCCCCTTCTTGGTCTTGGCAGGCTCGGTCCGCACCCCAAGGTaGCGCATGTACAGGCCAATG +
Preference number: 2 (lower is better)
Translates to: QRAASRMLLSPFLVLAGSVRTPR*RMYRPM
Trigger: CATTGGCCTGTACATGCGCCACCTTGGGGTGCGGAC...CGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCGCCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
3UTR-3UTR CCA 90 bp GCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCCCGACAGAGCTGTCCTaGCCCCTGAATATCCACCTG +
Preference number: 2 (lower is better)
Translates to: ASQHLGLSTWALVGLVRSPTELS*PLNIHL
Trigger: CAGGTGGATATTCAGGGGCCAGGACAGCTCTGTCGG...GGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR CAA 90 bp ATTCTCTCGGTCCGGGCATCAGCTGGAGACGTCTCTCGGCCACCATaGCCGTTCTCAGAGCTGCTGAGGAGGGGTTCTCGGGTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: ILSVRASAGDVSRPP*PFSELLRRGSRVLL
Trigger: GAGCAGCACCCGAGAACCCCTCCTCAGCAGCTCTGAGAACGGCAATGGTGGCCGAGAGACGTCTCCAGCTGATGCCCGGACCGAGAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
3UTR-3UTR TCA 90 bp TGGTCTTGGCAGGCTCGTCCGACCGCCGGTTCCCCATCACCTTTTTCCGGAAGAACAGGCCAATGGCGTTaGCCACGGCAGCACTCTTTT +
Preference number: 2 (lower is better)
Translates to: WSWQARPTAGSPSPFSGRTGQWR*PRQHSF
Trigger: AAAAGAGTGCTGCCGTGGTCAACGCCATTGGCCTGT...TCTTCCGGAAAAAGGTGATGGGGAACCGGCGGTCGGACGAGCCTGCCAAGACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598812.5
3UTR-3UTR CCA 90 bp GCGGGAGTGAGGCTGAACCTTCTCTGTCAGGCAGGGCTGAAGTTCTCTTCTAGCCCGACAGAGCTGTCCTaGCCCCTGAATATCCACCTG +
Preference number: 2 (lower is better)
Translates to: AGVRLNLLCQAGLKFSSSPTELS*PLNIHL
Trigger: CAGGTGGATATTCAGGGGCCAGGACAGCTCTGTCGG...GCTAGAAGAGAACTTCAGCCCTGCCTGACAGAGAAGGTTCAGCCTCACTCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR-3UTR CCA 90 bp GAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCACTCGGTCTCAGCACCTaGGCGCTGGTGGGGTTGGTG +
Preference number: 2 (lower is better)
Translates to: EAASSQQMRVYLVLGAVPLGLST*ALVGLV
Trigger: CACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAG...TGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR-3UTR TCA 90 bp GAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCACGCTGGTGGGGTTGGTaGGATCCGACAGAGCTGTCC +
Preference number: 2 (lower is better)
Translates to: EAASSQQMRVYLVLGAVPRWWGW*DPTELS
Trigger: GGACAGCTCTGTCGGATCTCACCAACCCCACCAGCG...TGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR-3UTR TCA 90 bp GCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAGCTTCTGTCAGGCAGGGCTaGAGTTCTCTTCTAGCCTCT +
Preference number: 2 (lower is better)
Translates to: AASSQQMRVYLVLGAVPASVRQG*SSLLAS
Trigger: AGAGGCTAGAAGAGAACTTCAGCCCTGCCTGACAGA...AGCTGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR-3UTR GCA 90 bp TCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTATATCCACCTGGGGACTaGTGTCTTGCCGTGAGACCT +
Preference number: 2 (lower is better)
Translates to: SEAASSQQMRVYLVLGAVYPPGD*CLAVRP
Trigger: AGGTCTCACGGCAAGACAGCAGTCCCCAGGTGGATA...TACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR-3UTR TCA 90 bp TTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCTCTGTCAGGCAGGGCTaGAGTTCTCTTCTAGCCTCT +
Preference number: 2 (lower is better)
Translates to: LFGSSKLTANACLLGTWCSVRQG*SSLLAS
Trigger: AGAGGCTAGAAGAGAACTTCAGCCCTGCCTGACAGA...GCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR-3UTR GCA 90 bp ATGAGATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTATCCACCTGGGGACTaGTGTCTTGCCGTGAGACCT +
Preference number: 2 (lower is better)
Translates to: MRLFGSSKLTANACLLGTYPPGD*CLAVRP
Trigger: AGGTCTCACGGCAAGACAGCAGTCCCCAGGTGGATA...AGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR-3UTR GCA 90 bp ATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGTTACTTGGTACTTGGTaGAGTACCAGCTGTGCTCCA +
Preference number: 2 (lower is better)
Translates to: IIRKQQAHSKCVFTWYLVLLGTW*STSCAP
Trigger: TGGAGCACAGCTGGTACTGCACCAAGTACCAAGTAA...CACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR-3UTR CAA 90 bp AGCTGGGCTACCTTTCCGAAGGGCCGTGGCAGCGAGCTGGCCCTCGGGGCCTGGGTCTCTCGGCCACCATaGCCGTTCTCAGAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: SWATFPKGRGSELALGAWVSRPP*PFSELL
Trigger: CAGCAGCTCTGAGAACGGCAATGGTGGCCGAGAGAC...CCAGGCCCCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAGGTAGCCCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
3UTR GCA 72 bp GCTCTCCCCGGTTCCAGCGGGCGGCATCCAGGATGCTaGTCAGCCCCTTCTTGGTCTTGGCAGGCTCGTCCG +
Preference number: 3 (lower is better)
Translates to: ALPGSSGRHPGC*SAPSWSWQARP
Trigger: CGGACGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCGCCCGCTGGAACCGGGGAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
3UTR CCA 72 bp AGCGGGCGGCATCCAGGATGCTGCTCAGCCCCTTCTTaGTCTTGGCAGGCTCGTCCGACCGCCGGTTCCCCA +
Preference number: 3 (lower is better)
Translates to: SGRHPGCCSAPS*SWQARPTAGSP
Trigger: TGGGGAACCGGCGGTCGGACGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCGCCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
3UTR CCA 72 bp CCGAAGGGCCGTGGCAGCGAGCTGGCCCTCGGGGCCTaGTCTGCAGAAGGGCAGGAGGTCACTGAGGATTCT +
Preference number: 3 (lower is better)
Translates to: PKGRGSELALGA*SAEGQEVTEDS
Trigger: AGAATCCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAGCTCGCTGCCACGGCCCTTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
3UTR TCA 72 bp ACGTCTCTCGGCCACCATTGCCGTTCTCAGAGCTGCTaGGGAGGGGTTCTCGGGTGCTGCTCGGGCTGGGCC +
Preference number: 3 (lower is better)
Translates to: TSLGHHCRSQSC*GGVLGCCSGWA
Trigger: GGCCCAGCCCGAGCAGCACCCGAGAACCCCTCCTCAGCAGCTCTGAGAACGGCAATGGTGGCCGAGAGACGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
3UTR TCA 72 bp CCTCGGGGCCTGGTCTGCAGAAGGGCAGGAGGTCACTaGGGATTCTCTCGGTCCGGGCATCAGCTGGAGACG +
Preference number: 3 (lower is better)
Translates to: PRGLVCRRAGGH*GFSRSGHQLET
Trigger: CGTCTCCAGCTGATGCCCGGACCGAGAGAATCCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
3UTR CCA 72 bp CCCCCACAGGCAATACTGAGATGGCCCGGGTCACCGTaGTGCCCTCCAGAATGGAGCCCTGAGTCCCCCAAG +
Preference number: 3 (lower is better)
Translates to: PPQAILRWPGSP*CPPEWSPESPK
Trigger: CTTGGGGGACTCAGGGCTCCATTCTGGAGGGCACCACGGTGACCCGGGCCATCTCAGTATTGCCTGTGGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000599846.5
3UTR CCA 72 bp CGGCATCCAGGATGCTGCTCAGCCCCTTCTTGGTCTTaGCAGGCTCGTCCGACCGCCGGTTCCCCATCACCT +
Preference number: 3 (lower is better)
Translates to: RHPGCCSAPSWS*QARPTAGSPSP
Trigger: AGGTGATGGGGAACCGGCGGTCGGACGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
3UTR GCA 72 bp CCACAGGCAATACTGAGATGGCCCGGGTCACCGTGGTaGCCTCCAGAATGGAGCCCTGAGTCCCCCAAGCAG +
Preference number: 3 (lower is better)
Translates to: PQAILRWPGSPW*PPEWSPESPKQ
Trigger: CTGCTTGGGGGACTCAGGGCTCCATTCTGGAGGGCACCACGGTGACCCGGGCCATCTCAGTATTGCCTGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000599846.5
3UTR-3UTR CAA 90 bp CAGCGGGCGGCATCCAGGATGCTGCTCAGCCCCTTCTTGGTCTTGGCAGGCTCGTACAGGCCAATGGCGTaGACCACGGCAGCACTCTTT +
Preference number: 3 (lower is better)
Translates to: QRAASRMLLSPFLVLAGSYRPMA*TTAALF
Trigger: AAAGAGTGCTGCCGTGGTCAACGCCATTGGCCTGTA...CGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCGCCCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598812.5
3UTR TCA 72 bp ACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTaGGATCCGACAGAGCTGTCCTGGCCCCTGAATATC +
Preference number: 3 (lower is better)
Translates to: TSVSAPGRWWGW*DPTELSWPLNI
Trigger: GATATTCAGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR-3UTR CAA 90 bp GCGGGAGTGAGGCTGAACCTTCTCTGTCAGGCAGGGCTGAAGTTCTCTTCTAGCTGGGCGCTGGTGGGGTaGGTGAGATCCGACAGAGCT +
Preference number: 3 (lower is better)
Translates to: AGVRLNLLCQAGLKFSSSWALVG*VRSDRA
Trigger: AGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCA...GCTAGAAGAGAACTTCAGCCCTGCCTGACAGAGAAGGTTCAGCCTCACTCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR CCA 72 bp GACTTCTTGTCTCCACTCTTGGTCCGCACCCCAAGGTaGCGCATGTACAGGCCAATGGCGTTGACCACGGCA +
Preference number: 3 (lower is better)
Translates to: DFLSPLLVRTPR*RMYRPMALTTA
Trigger: TGCCGTGGTCAACGCCATTGGCCTGTACATGCGCCACCTTGGGGTGCGGACCAAGAGTGGAGACAAGAAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598812.5
3UTR CCA 72 bp GGAAGAAGTTCCTCCCCGACTTCTTGTCTCCACTCTTaGTCCGCACCCCAAGGTGGCGCATGTACAGGCCAA +
Preference number: 3 (lower is better)
Translates to: GRSSSPTSCLHS*SAPQGGACTGQ
Trigger: TTGGCCTGTACATGCGCCACCTTGGGGTGCGGACCAAGAGTGGAGACAAGAAGTCGGGGAGGAACTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
3UTR-3UTR CAA 90 bp GTCTGTAGCACCTGGCTTCTCGGCATCAACCTCTGCTTTGAGGTGTCGAAAATCTTCCTCCCCGACTTCTaGTCTCCACTCTTGGTCCGC +
Preference number: 3 (lower is better)
Translates to: VCSTWLLGINLCFEVSKIFLPDF*SPLLVR
Trigger: GCGGACCAAGAGTGGAGACAAGAAGTCGGGGAGGAA...GATTTTCGACACCTCAAAGCAGAGGTTGATGCCGAGAAGCCAGGTGCTACAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
3UTR CCA 72 bp CGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTaGTACTTGGTGCAGTACCAGCTGTGCTCCATGCGC +
Preference number: 3 (lower is better)
Translates to: RKQQAHSKCVFT*YLVQYQLCSMR
Trigger: GCGCATGGAGCACAGCTGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR-3UTR CAA 90 bp CGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACGGAGGGAGGTCATTATaGTCCCATTTTGCAGATGAG +
Preference number: 3 (lower is better)
Translates to: RKQQAHSKCVFTWYLVQYGGRSL*SHFADE
Trigger: CTCATCTGCAAAATGGGACAATAATGACCTCCCTCC...GTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR-3UTR CAA 90 bp GCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAGCTCATTATTGTCCCATTTaGCAGATGAGGAAACTTGAG +
Preference number: 3 (lower is better)
Translates to: AASSQQMRVYLVLGAVPAHYCPI*QMRKLE
Trigger: CTCAAGTTTCCTCATCTGCAAAATGGGACAATAATG...AGCTGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR GCA 72 bp AATGAGATTATTCGGAAGCAGCAAGCTCACAGCAAATaGGTGTTTACTTGGTACTTGGTGCAGTACCAGCTG +
Preference number: 3 (lower is better)
Translates to: NEIIRKQQAHSK*VFTWYLVQYQL
Trigger: CAGCTGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATCTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR-3UTR CAA 90 bp GATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTCATTATTGTCCCATTTaGCAGATGAGGAAACTTGAG +
Preference number: 3 (lower is better)
Translates to: DYSEAASSQQMRVYLVLGHYCPI*QMRKLE
Trigger: CTCAAGTTTCCTCATCTGCAAAATGGGACAATAATG...ACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR TCA 90 bp CTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCTGGGCCCTGCGGGGATaGGTCCCCCAGCTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: LSTWALVGLVRSDRAVLAWALRG*VPQLQG
Trigger: CCCCTGGAGCTGGGGGACTCATCCCCGCAGGGCCCA...GGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp GCTGGGCTACCTTTCCGAAGGGCCGTGGCAGCGAGCTGGCCCTCGGGGCCTGGTGCCGCAGCATGGTCTTaGCATCGGGCGTGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: AGLPFRRAVAASWPSGPGAAAWS*HRAWAS
Trigger: TGACGCCCACGCCCGATGGCAAGACCATGCTGCGGC...ACCAGGCCCCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAGGTAGCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR CCA 90 bp GGGCTACCTTTCCGAAGGGCCGTGGCAGCGAGCTGGCCCTCGGGGCCTGGTCTGGGTCCGGGCATCAGCTaGAGACGTCTCTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: GLPFRRAVAASWPSGPGLGPGIS*RRLSAT
Trigger: GGTGGCCGAGAGACGTCTCCAGCTGATGCCCGGACC...CAGACCAGGCCCCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAGGTAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR TCA 90 bp GGAACCTGGGGCTCTCCCCGGTTCCAGCGGGCGGCATCCAGGATGCTGCTCAGCTCTCCTCCAGGTGCATaGGCAGCCGCTCCGCCACGT +
Preference number: 4 (lower is better)
Translates to: GTWGSPRFQRAASRMLLSSPPGA*AAAPPR
Trigger: ACGTGGCGGAGCGGCTGCTCATGCACCTGGAGGAGA...GCTGAGCAGCATCCTGGATGCCGCCCGCTGGAACCGGGGAGAGCCCCAGGTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CCA 90 bp CAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCCGCAGCATGCGCACGTaGGCCGCCTCTGTCACCAGC +
Preference number: 4 (lower is better)
Translates to: QHLGAGGVGEIRQSCPGPRSMRT*AASVTS
Trigger: GCTGGTGACAGAGGCGGCCCACGTGCGCATGCTGCG...GGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CGAAGGGCCGTGGCAGCGAGCTGGCCCTCGGGGCCTGGTCTGCAGAAGGGCAGGGTCAGTGTCCGGCTATaGGACTTGAGCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RRAVAASWPSGPGLQKGRVSVRL*DLSSSR
Trigger: GCGGCTGCTGCTCAAGTCCCATAGCCGGACACTGAC...CCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAGCTCGCTGCCACGGCCCTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
3UTR CAA 72 bp CAGCGGGCGGCATCCAGGATGCTGCTCAGCCCCTTCTaGGTCTTGGCAGGCTCGTCCGACCGCCGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: QRAASRMLLSPF*VLAGSSDRRFP
Trigger: GGGGAACCGGCGGTCGGACGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCGCCCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR TCA 90 bp CTCTCGGCCACCATTGCCGTTCTCAGAGCTGCTGAGGAGGGGTTCTCGGGTGCTGGGTCATGGCGGAGGTaGGCCGCAGCACGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: LSATIAVLRAAEEGFSGAGSWRR*AAARAA
Trigger: TGCGGCCCGTGCTGCGGCTCACCTCCGCCATGACCC...AGCACCCGAGAACCCCTCCTCAGCAGCTCTGAGAACGGCAATGGTGGCCGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR TCA 90 bp AGAGCTGGGCTACCTTTCCGAAGGGCCGTGGCAGCGAGCTGGCCCTCGGGGCCTAGGGCAGGAGGTCACTaGGGATTCTCTCGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: RAGLPFRRAVAASWPSGPRAGGH*GFSRSG
Trigger: CCCGGACCGAGAGAATCCTCAGTGACCTCCTGCCCT...AGGCCCCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAGGTAGCCCAGCTCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR GCA 90 bp CAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCGCCGCAGCATGGTCTTaGCATCGGGCGTGGGCGTCA +
Preference number: 4 (lower is better)
Translates to: QHLGAGGVGEIRQSCPGPAAAWS*HRAWAS
Trigger: TGACGCCCACGCCCGATGGCAAGACCATGCTGCGGC...GGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp CAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCGGCGGGAACCTCAAGTaGAGCCAGGCTGGGGGACAG +
Preference number: 4 (lower is better)
Translates to: QHLGAGGVGEIRQSCPGPGGNLK*SQAGGQ
Trigger: CTGTCCCCCAGCCTGGCTGCACTTGAGGTTCCCGCC...GGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCGGTCCGGGCATCAGCTaGAGACGTCTCTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: QHLGAGGVGEIRQSCPGPGPGIS*RRLSAT
Trigger: GGTGGCCGAGAGACGTCTCCAGCTGATGCCCGGACC...GGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp GCGAGCTGGCCCTCGGGGCCTGGTCTGCAGAAGGGCAGGAGGTCACTGAGGATTCTTTCCGAAGGGCCGTaGCAGCGAGCTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: ASWPSGPGLQKGRRSLRILSEGP*QRAGPR
Trigger: CCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAG...AATCCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAGCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR TCA 90 bp CAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTCCGGCTATGGGACTTaGGCAGCAGCCGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: QHLGAGGVGEIRQSCPGPSGYGT*AAAARP
Trigger: AGGACGAGCGGCTGCTGCTCAAGTCCCATAGCCGGA...GGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR TCA 90 bp TGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTGAATATGGGTCATGGCGGAGGTaGGCCGCAGCACGGGCCGCA +
Preference number: 4 (lower is better)
Translates to: WALVGLVRSDRAVLAPEYGSWRR*AAARAA
Trigger: TGCGGCCCGTGCTGCGGCTCACCTCCGCCATGACCC...ATATTCAGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp AATCTGGAACCTGGGGCTCTCCCCGGTTCCAGCGGGCGGCATCCAGGATGCTGCCGGCCCACGGCTACCTaGTGGCTTTGCACCACCTCC +
Preference number: 4 (lower is better)
Translates to: NLEPGALPGSSGRHPGCCRPTAT*WLCTTS
Trigger: GGAGGTGGTGCAAAGCCAGCAGGTAGCCGTGGGCCG...GCAGCATCCTGGATGCCGCCCGCTGGAACCGGGGAGAGCCCCAGGTTCCAGATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR GCA 90 bp CAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGGCAGGGCCAAGCACTaGCGTGGCGGAACTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QHLGLSTWALVGLVRSDRGRAKH*RGGTGV
Trigger: GACCCCAGTTCCGCCACGGCAGTGCTTGGCCCTGCC...TCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp AGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTGTCCCGGTCCAGGCTTaGGTGTCCAGCAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: STWALVGLVRSDRAVLAPVPVQA*VSSRGP
Trigger: AGGACCCCTGCTGGACACGCAAGCCTGGACCGGGAC...AGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp GTCTTGGCAGGCTCGTCCGACCGCCGGTTCCCCATCACCTTTTTCCGGAAGAAGCCCGGGCCTCGTAGCTaGCTCGGTCCCGCCCAACCC +
Preference number: 4 (lower is better)
Translates to: VLAGSSDRRFPITFFRKKPGPRS*LGPAQP
Trigger: GGGTTGGGCGGGACCGAGCCAGCTACGAGGCCCGGG...CTTCTTCCGGAAAAAGGTGATGGGGAACCGGCGGTCGGACGAGCCTGCCAAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CCA 90 bp TCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCTGGCCCTCGGGGCCTaGTCTGCAGAAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SQHLGAGGVGEIRQSCPGLALGA*SAEGQE
Trigger: CTCCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAG...GCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp GATTCTCTCGGTCCGGGCATCAGCTGGAGACGTCTCTCGGCCACCATTGCCGTTGCCGTGGCAGCGAGCTaGCCCTCGGGGCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: DSLGPGISWRRLSATIAVAVAAS*PSGPGL
Trigger: CAGACCAGGCCCCGAGGGCCAGCTCGCTGCCACGGC...AACGGCAATGGTGGCCGAGAGACGTCTCCAGCTGATGCCCGGACCGAGAGAATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR CCA 90 bp AGCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCTTTCCGAAGGGCCGTaGCAGCGAGCTGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: SLSAPRSQHLGAGGVGEILSEGP*QRAGPR
Trigger: CCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAG...GATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCTCGGTCTCAGCACCTaGGCGCTGGTGGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LSTWALVGLVRSDRAVLALGLST*ALVGLV
Trigger: CACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAG...GGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR CAA 72 bp GCGGCATCCAGGATGCTGCTCAGCCCCTTCTTGGTCTaGGCAGGCTCGTCCGACCGCCGGTTCCCCATCACC +
Preference number: 4 (lower is better)
Translates to: AASRMLLSPFLV*AGSSDRRFPIT
Trigger: GGTGATGGGGAACCGGCGGTCGGACGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR TCA 90 bp GCGAGCTGGCCCTCGGGGCCTGGTCTGCAGAAGGGCAGGAGGTCACTGAGGATTCGTTCTCAGAGCTGCTaGGGAGGGGTTCTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: ASWPSGPGLQKGRRSLRIRSQSC*GGVLGC
Trigger: GCACCCGAGAACCCCTCCTCAGCAGCTCTGAGAACG...AATCCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAGCTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR GCA 90 bp CAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGACCGGCAGCACTCGGCTaGCAGCTCCACTTTCTCCCG +
Preference number: 4 (lower is better)
Translates to: QHLGLSTWALVGLVRSDRPAALG*QLHFLP
Trigger: CGGGAGAAAGTGGAGCTGGCAGCCGAGTGCTGCCGG...TCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp GCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCTCCAGGCTGCGTGTGTaGGGGTCCGTGTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: ASQHLGLSTWALVGLVRSSRLRV*GSVFQS
Trigger: GGACTGGAACACGGACCCGCACACACGCAGCCTGGA...GGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp AGCGGGCGGCATCCAGGATGCTGCTCAGCCCCTTCTTGGTCTTGGCAGGCTCGTGCCCCTTCTTGGTCTTaGCAGGCTCGTCCGACCGCC +
Preference number: 4 (lower is better)
Translates to: SGRHPGCCSAPSWSWQARAPSWS*QARPTA
Trigger: GGCGGTCGGACGAGCCTGCCAAGACCAAGAAGGGGC...ACGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCGCCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CCA 90 bp CTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCGCTGTGCAGGGTGTCTaGGGGGACGAGTTCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LGLSTWALVGLVRSDRAVAVQGV*GDEFPP
Trigger: TGGCGGGAACTCGTCCCCCCAGACACCCTGCACAGC...GACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp GCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCTCCTGCCGCTTCACCTaGCTCTTGGGCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: ASQHLGLSTWALVGLVRSSCRFT*LLGRLC
Trigger: GCACAGCCTGCCCAAGAGCCAGGTGAAGCGGCAGGA...GGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CTCTCGGCCACCATTGCCGTTCTCAGAGCTGCTGAGGAGGGGTTCTCGGGTGCTGCACGGGCCGCAGCATaGTCTTGCCATCGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: LSATIAVLRAAEEGFSGAARAAA*SCHRAW
Trigger: CCACGCCCGATGGCAAGACCATGCTGCGGCCCGTGC...AGCACCCGAGAACCCCTCCTCAGCAGCTCTGAGAACGGCAATGGTGGCCGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR CCA 90 bp TCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCAGAGAAGGTGGTGTaGGACTTGGCGGGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: SQHLGAGGVGEIRQSCPGPEKVV*DLAGRS
Trigger: GCTCCGCCCCGCCAAGTCCCACACCACCTTCTCTGG...GCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp TCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCGTCCAGCAGGGGTCCTaGACGCATCGTCGCCACCTC +
Preference number: 4 (lower is better)
Translates to: SQHLGAGGVGEIRQSCPGVQQGS*THRRHL
Trigger: GAGGTGGCGACGATGCGTCCAGGACCCCTGCTGGAC...GCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp CTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACTCGGTCTCAGCACCTaGGCGCTGGTGGGGTTGGTG +
Preference number: 4 (lower is better)
Translates to: LSAPRSQHLGAGGVGEIRLGLST*ALVGLV
Trigger: CACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAG...TCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR TCA 90 bp TCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCGTTCTCAGAGCTGCTaGGGAGGGGTTCTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: SQHLGAGGVGEIRQSCPGRSQSC*GGVLGC
Trigger: GCACCCGAGAACCCCTCCTCAGCAGCTCTGAGAACG...GCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR TCA 90 bp AGCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCAGGGCAGGAGGTCACTaGGGATTCTCTCGGTCCGGG +
Preference number: 4 (lower is better)
Translates to: SLSAPRSQHLGAGGVGEIRAGGH*GFSRSG
Trigger: CCCGGACCGAGAGAATCCTCAGTGACCTCCTGCCCT...GATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp AGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTACTCCAGGGGTGTCCTaGCCAGGAGCCCCGATATTC +
Preference number: 4 (lower is better)
Translates to: STWALVGLVRSDRAVLAPTPGVS*PGAPIF
Trigger: GAATATCGGGGCTCCTGGGCAGGACACCCCTGGAGT...AGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp AGCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCACCTGGTTCCCGGTCTaGGCTGTCCAGGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: SLSAPRSQHLGAGGVGEITWFPV*AVQGQR
Trigger: CCTCTGTCCCTGGACAGCCCAGACCGGGAACCAGGT...GATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp AGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTTCTTGCCATCGGGCGTaGGCGTCAGTGTCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: STWALVGLVRSDRAVLAPSCHRA*ASVSGY
Trigger: ATAGCCGGACACTGACGCCCACGCCCGATGGCAAGA...AGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CTGCAGAAGGGCAGGAGGTCACTGAGGATTCTCTCGGTCCGGGCATCAGCTGGACTGGCCCTCGGGGCCTaGTCTGCAGAAGGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LQKGRRSLRILSVRASAGLALGA*SAEGQE
Trigger: CTCCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAG...TCCAGCTGATGCCCGGACCGAGAGAATCCTCAGTGACCTCCTGCCCTTCTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR CCA 90 bp TCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCGGCCAAGCACTGCCGTaGCGGAACTGGGGTCCATGT +
Preference number: 4 (lower is better)
Translates to: SQHLGAGGVGEIRQSCPGGQALP*RNWGPC
Trigger: ACATGGACCCCAGTTCCGCCACGGCAGTGCTTGGCC...GCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp AAGGTGGTGTGGGACTTGGCGGGGCGGAGCCTGACTGTATCCATATGTCCCTCTCTCCAGGCTCGGGGGTaGCTCGTCGGGCAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: KVVWDLAGRSLTVSICPSLQARG*LVGQGQ
Trigger: TTGGCCCTGCCCGACGAGCCACCCCCGAGCCTGGAG...AGAGGGACATATGGATACAGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp GGTCCGGGCATCAGCTGGAGACGTCTCTCGGCCACCATTGCCGTTCTCAGAGCTAGAGCACACCAGCGGTaGCCACCTCGCGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: GPGISWRRLSATIAVLRARAHQR*PPRGSW
Trigger: CCATGACCCGCGAGGTGGCCACCGCTGGTGTGCTCT...AGCTCTGAGAACGGCAATGGTGGCCGAGAGACGTCTCCAGCTGATGCCCGGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600517.1
3UTR CAA 72 bp GTCCGGGCATCAGCTGGAGACGTCTCTCGGCCACCATaGCCGTTCTCAGAGCTGCTGAGGAGGGGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: VRASAGDVSRPP*PFSELLRRGSR
Trigger: CCGAGAACCCCTCCTCAGCAGCTCTGAGAACGGCAATGGTGGCCGAGAGACGTCTCCAGCTGATGCCCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR TCA 90 bp CAGCCCCTTCTTGGTCTTGGCAGGCTCGTCCGACCGCCGGTTCCCCATCACCTTAGGGCGTCATGCCCATaGGCCGCTTGGAACGGAAGT +
Preference number: 4 (lower is better)
Translates to: QPLLGLGRLVRPPVPHHLRASCP*AAWNGS
Trigger: ACTTCCGTTCCAAGCGGCTCATGGGCATGACGCCCT...AAGGTGATGGGGAACCGGCGGTCGGACGAGCCTGCCAAGACCAAGAAGGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR TCA 90 bp CAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGACTCCGATCTCCTCGATaGGGTAGCCACTCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: QHLGLSTWALVGLVRSDRLRSPR*GSHSPA
Trigger: GGCAGGAGAGTGGCTACCTCATCGAGGAGATCGGAG...TCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR TCA 90 bp GACGTCTCTCGGCCACCATTGCCGTTCTCAGAGCTGCTGAGGAGGGGTTCTCGGTCCGGCTATGGGACTTaGGCAGCAGCCGCTCGTCCT +
Preference number: 4 (lower is better)
Translates to: DVSRPPLPFSELLRRGSRSGYGT*AAAARP
Trigger: AGGACGAGCGGCTGCTGCTCAAGTCCCATAGCCGGA...CCGAGAACCCCTCCTCAGCAGCTCTGAGAACGGCAATGGTGGCCGAGAGACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR GCA 90 bp GCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCTCCAGCAGCAGCACATaGACCTCCACTGCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: ASQHLGLSTWALVGLVRSSSSST*TSTALS
Trigger: GGACAAGGCAGTGGAGGTGCATGTGCTGCTGCTGGA...GGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp CAGAAGGGCAGGAGGTCACTGAGGATTCTCTCGGTCCGGGCATCAGCTGGAGACCCTCGGGGCCTGGTCTaGAGAAGGGCAGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: QKGRRSLRILSVRASAGDPRGLV*RRAGGH
Trigger: GTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGG...GTCTCCAGCTGATGCCCGGACCGAGAGAATCCTCAGTGACCTCCTGCCCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR GCA 90 bp AGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTTGCCCAGGTGAGAGCTaGCTTTCCCCAGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: STWALVGLVRSDRAVLAPCPGES*LSPEKV
Trigger: CACCTTCTCTGGGGAAAGGCAGCTCTCACCTGGGCA...AGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp GCCCCTTCTTGGTCTTGGCAGGCTCGTCCGACCGCCGGTTCCCCATCACCTTTTCCCACGGCTACCTGCTaGCTTTGCACCACCTCCTGC +
Preference number: 4 (lower is better)
Translates to: APSWSWQARPTAGSPSPFPTATC*LCTTSC
Trigger: GCAGGAGGTGGTGCAAAGCCAGCAGGTAGCCGTGGG...AAAAGGTGATGGGGAACCGGCGGTCGGACGAGCCTGCCAAGACCAAGAAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CCA 90 bp TCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCGTCAGTGTCCGGCTATaGGACTTGAGCAGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SQHLGAGGVGEIRQSCPGVSVRL*DLSSSR
Trigger: GCGGCTGCTGCTCAAGTCCCATAGCCGGACACTGAC...GCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CGGCCACCATTGCCGTTCTCAGAGCTGCTGAGGAGGGGTTCTCGGGTGCTGCTCTCTTGCCATCGGGCGTaGGCGTCAGTGTCCGGCTAT +
Preference number: 4 (lower is better)
Translates to: RPPLPFSELLRRGSRVLLSCHRA*ASVSGY
Trigger: ATAGCCGGACACTGACGCCCACGCCCGATGGCAAGA...GAGCAGCACCCGAGAACCCCTCCTCAGCAGCTCTGAGAACGGCAATGGTGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR CCA 90 bp AGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTCCGACAGAGCTGTCCTaGCCCCTGAATATCCACCTG +
Preference number: 4 (lower is better)
Translates to: STWALVGLVRSDRAVLAPPTELS*PLNIHL
Trigger: CAGGTGGATATTCAGGGGCCAGGACAGCTCTGTCGG...AGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR GCA 90 bp AGGTGGCGCATGTACAGGCCAATGGCGTTGACCACGGCAGCACTCTTTTCTTCGAGCTGGGCCAGCTCCTaGTCCCAGGGCGTCATGCCC +
Preference number: 4 (lower is better)
Translates to: RWRMYRPMALTTAALFSSSWASS*SQGVMP
Trigger: GGGCATGACGCCCTGGGAGCAGGAGCTGGCCCAGCT...CGAAGAAAAGAGTGCTGCCGTGGTCAACGCCATTGGCCTGTACATGCGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR GCA 90 bp GCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCTACTTGGTCAGCCGCTaGATCTCCGTGGGGATCATG +
Preference number: 4 (lower is better)
Translates to: ASQHLGLSTWALVGLVRSYLVSR*ISVGIM
Trigger: CATGATCCCCACGGAGATGCAGCGGCTGACCAAGTA...GGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp CTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGAGGCTCTTCTGTGTTCTaGCCGATGCTCTGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSAPRSQHLGAGGVGEIRGSSVF*PMLCRS
Trigger: GCTCCTGCAGAGCATCGGGCAGAACACAGAAGAGCC...TCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp AGCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCTGCCCAGGTGAGAGCTaGCTTTCCCCAGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: SLSAPRSQHLGAGGVGEICPGES*LSPEKV
Trigger: CACCTTCTCTGGGGAAAGGCAGCTCTCACCTGGGCA...GATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR GCA 90 bp CCCAGAGAAGGTGGTGTGGGACTTGGCGGGGCGGAGCCTGACTGTATCCATATGTCCAGGCTGCGTGTGTaGGGGTCCGTGTTCCAGTCC +
Preference number: 4 (lower is better)
Translates to: PREGGVGLGGAEPDCIHMSRLRV*GSVFQS
Trigger: GGACTGGAACACGGACCCGCACACACGCAGCCTGGA...CATATGGATACAGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTTCTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CTCTTGGTCCGCACCCCAAGGTGGCGCATGTACAGGCCAATGGCGTTGACCACGTGCTCAGCCCCTTCTTaGTCTTGGCAGGCTCGTCCG +
Preference number: 4 (lower is better)
Translates to: LLVRTPRWRMYRPMALTTCSAPS*SWQARP
Trigger: CGGACGAGCCTGCCAAGACCAAGAAGGGGCTGAGCA...CGTGGTCAACGCCATTGGCCTGTACATGCGCCACCTTGGGGTGCGGACCAAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CCA 90 bp GCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCCATTCTGCCATGGGCTaGAAGAAGAGGTCGTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASQHLGLSTWALVGLVRSHSAMG*KKRSCS
Trigger: GCTGCACGACCTCTTCTTCCAGCCCATGGCAGAATG...GGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp AGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTTCTAAGGCAAATGACTaGCGGCTGCAGAAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: STWALVGLVRSDRAVLAPSKAND*RLQKRE
Trigger: CTCCCGCTTCTGCAGCCGCCAGTCATTTGCCTTAGA...AGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCACGGCTTGGTTGACGTaGTGTAGAATTTCCCGGCAG +
Preference number: 4 (lower is better)
Translates to: QHLGAGGVGEIRQSCPGPTAWLT*CRISRQ
Trigger: CTGCCGGGAAATTCTACACCACGTCAACCAAGCCGT...GGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp CCGGAAGAAGTTCCTCCCCGACTTCTTGTCTCCACTCTTGGTCCGCACCCCAAGTGCATCTCCTCCAGGTaGATGAGCAGCCGCTCCGCC +
Preference number: 4 (lower is better)
Translates to: PEEVPPRLLVSTLGPHPKCISSR*MSSRSA
Trigger: GGCGGAGCGGCTGCTCATGCACCTGGAGGAGATGCA...CTTGGGGTGCGGACCAAGAGTGGAGACAAGAAGTCGGGGAGGAACTTCTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR GCA 90 bp CTCTTGGTCCGCACCCCAAGGTGGCGCATGTACAGGCCAATGGCGTTGACCACGCGGCATCCAGGATGCTaGTCAGCCCCTTCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: LLVRTPRWRMYRPMALTTRHPGC*SAPSWS
Trigger: AGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCG...CGTGGTCAACGCCATTGGCCTGTACATGCGCCACCTTGGGGTGCGGACCAAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR GCA 90 bp TCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCTGGGGAAGATGTTCTaGAGCTCCTCCAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SQHLGAGGVGEIRQSCPGLGKMF*SSSKGK
Trigger: CTTCCCCTTGGAGGAGCTGCAGAACATCTTCCCCAG...GCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp GCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCCTCCGACACAGTCTGTaGCACCAGCTCGTATATCTG +
Preference number: 4 (lower is better)
Translates to: ASQHLGLSTWALVGLVRSLRHSL*HQLVYL
Trigger: CAGATATACGAGCTGGTGGCACAGACTGTGTCGGAG...GGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp TCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCACCAGCTGTGCTCCATaGGCCCTGCGGTTTAACCTT +
Preference number: 4 (lower is better)
Translates to: SQHLGAGGVGEIRQSCPGTSCAP*ALRFNL
Trigger: AAGGTTAAACCGCAGGGCGCATGGAGCACAGCTGGT...GCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp TTGTCTCCACTCTTGGTCCGCACCCCAAGGTGGCGCATGTACAGGCCAATGGCGGTCCGCACCCCAAGGTaGCGCATGTACAGGCCAATG +
Preference number: 4 (lower is better)
Translates to: LSPLLVRTPRWRMYRPMAVRTPR*RMYRPM
Trigger: CATTGGCCTGTACATGCGCCACCTTGGGGTGCGGAC...CGCCATTGGCCTGTACATGCGCCACCTTGGGGTGCGGACCAAGAGTGGAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CCA 90 bp CTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGAACCAGCTCGTATATCTaGGCCTCCTGGTCCCAGGTA +
Preference number: 4 (lower is better)
Translates to: LSAPRSQHLGAGGVGEIRTSSYI*ASWSQV
Trigger: TACCTGGGACCAGGAGGCCCAGATATACGAGCTGGT...TCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR TCA 90 bp AGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTACTGCTGTCTTGCCGTaGGACCTATTTTCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: STWALVGLVRSDRAVLAPTAVLP*DLFSPL
Trigger: TAGAGGGGAAAATAGGTCTCACGGCAAGACAGCAGT...AGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR TCA 90 bp CTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCTCTGTCAGGCAGGGCTaGAGTTCTCTTCTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LGLSTWALVGLVRSDRAVSVRQG*SSLLAS
Trigger: AGAGGCTAGAAGAGAACTTCAGCCCTGCCTGACAGA...GACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR GCA 90 bp CTTCTCGGCATCAACCTCTGCTTTGAGGTGTCGAAAATCTGGAACCTGGGGCTCCGGAAGTCCTCCAGCTaGCGGCCCACGGCTACCTGC +
Preference number: 4 (lower is better)
Translates to: LLGINLCFEVSKIWNLGLRKSSS*RPTATC
Trigger: GCAGGTAGCCGTGGGCCGGCAGCTGGAGGACTTCCG...GAGCCCCAGGTTCCAGATTTTCGACACCTCAAAGCAGAGGTTGATGCCGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR GCA 90 bp GAAGGTGGTGTGGGACTTGGCGGGGCGGAGCCTGACTGTATCCATATGTCCCTCTTCTGCCCGATGCTCTaGAGGAGCAGGGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: EGGVGLGGAEPDCIHMSLFCPML*RSRGYL
Trigger: CAAGTACCCCCTGCTCCTGCAGAGCATCGGGCAGAA...GAGGGACATATGGATACAGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp CAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTTACTTGGTACTTGGTaGAGTACCAGCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QHLGAGGVGEIRQSCPGPLLGTW*STSCAP
Trigger: TGGAGCACAGCTGGTACTGCACCAAGTACCAAGTAA...GGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp CTTCTTGGTCTTGGCAGGCTCGTCCGACCGCCGGTTCCCCATCACCTTTTTCCGTCTTGTCTCCACTCTTaGTCCGCACCCCAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLGLGRLVRPPVPHHLFPSCLHS*SAPQGG
Trigger: GCCACCTTGGGGTGCGGACCAAGAGTGGAGACAAGA...CGGAAAAAGGTGATGGGGAACCGGCGGTCGGACGAGCCTGCCAAGACCAAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CCA 90 bp AGCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCACAGGCATTCTGCCATaGGCTGGAAGAAGAGGTCGT +
Preference number: 4 (lower is better)
Translates to: SLSAPRSQHLGAGGVGEITGILP*AGRRGR
Trigger: ACGACCTCTTCTTCCAGCCCATGGCAGAATGCCTGT...GATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCATGTCACGCACGGCTTaGTTGACGTGGTGTAGAATT +
Preference number: 4 (lower is better)
Translates to: QHLGAGGVGEIRQSCPGPMSRTA*LTWCRI
Trigger: AATTCTACACCACGTCAACCAAGCCGTGCGTGACAT...GGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp AAGGTGGTGTGGGACTTGGCGGGGCGGAGCCTGACTGTATCCATATGTCCCTCTTTTCCCCAGAGAAGGTaGTGTGGGACTTGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KVVWDLAGRSLTVSICPSFPQRR*CGTWRG
Trigger: GCCCCGCCAAGTCCCACACCACCTTCTCTGGGGAAA...AGAGGGACATATGGATACAGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp GAAGGTGGTGTGGGACTTGGCGGGGCGGAGCCTGACTGTATCCATATGTCCCTCCCGACAGAGCTGTCCTaGCCCCTGAATATCCACCTG +
Preference number: 4 (lower is better)
Translates to: EGGVGLGGAEPDCIHMSLPTELS*PLNIHL
Trigger: CAGGTGGATATTCAGGGGCCAGGACAGCTCTGTCGG...GAGGGACATATGGATACAGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp AGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTAATGGGCATCCATCATaGCAGTTCCTACCTCACAGG +
Preference number: 4 (lower is better)
Translates to: STWALVGLVRSDRAVLAPNGHPS*QFLPHR
Trigger: CCTGTGAGGTAGGAACTGCCATGATGGATGCCCATT...AGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR CAA 72 bp CGCACCCCAAGGTGGCGCATGTACAGGCCAATGGCGTaGACCACGGCAGCACTCTTTTCTTCGTCGGTAGAG +
Preference number: 4 (lower is better)
Translates to: RTPRWRMYRPMA*TTAALFSSSVE
Trigger: CTCTACCGACGAAGAAAAGAGTGCTGCCGTGGTCAACGCCATTGGCCTGTACATGCGCCACCTTGGGGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
3UTR CAA 72 bp CGGAAGAAGTTCCTCCCCGACTTCTTGTCTCCACTCTaGGTCCGCACCCCAAGGTGGCGCATGTACAGGCCA +
Preference number: 4 (lower is better)
Translates to: RKKFLPDFLSPL*VRTPRWRMYRP
Trigger: TGGCCTGTACATGCGCCACCTTGGGGTGCGGACCAAGAGTGGAGACAAGAAGTCGGGGAGGAACTTCTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR TCA 90 bp AGCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCTGCGTTGCTTGGCTTTaGGCTGCTCTAAGGCAAATG +
Preference number: 4 (lower is better)
Translates to: SLSAPRSQHLGAGGVGEICVAWL*AALRQM
Trigger: CATTTGCCTTAGAGCAGCTCAAAGCCAAGCAACGCA...GATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR TCA 90 bp CAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAACTGCTGTCTTGCCGTaGGACCTATTTTCCCCTCTA +
Preference number: 4 (lower is better)
Translates to: QHLGLSTWALVGLVRSDRTAVLP*DLFSPL
Trigger: TAGAGGGGAAAATAGGTCTCACGGCAAGACAGCAGT...TCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR GCA 90 bp CGCATGTACAGGCCAATGGCGTTGACCACGGCAGCACTCTTTTCTTCGTCGGTAGGGCGGCATCCAGGATaGTGCTCAGCCCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RMYRPMALTTAALFSSSVGRHPG*CSAPSW
Trigger: CCAAGAAGGGGCTGAGCAGCATCCTGGATGCCGCCC...TACCGACGAAGAAAAGAGTGCTGCCGTGGTCAACGCCATTGGCCTGTACATGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR GCA 90 bp CAGCGGGCGGCATCCAGGATGCTGCTCAGCCCCTTCTTGGTCTTGGCAGGCTCGCTCGGCATCAACCTCTaGTTTGAGGTGTCGAAAATC +
Preference number: 4 (lower is better)
Translates to: QRAASRMLLSPFLVLAGSLGINL*FEVSKI
Trigger: GATTTTCGACACCTCAAAGCAGAGGTTGATGCCGAG...CGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCGCCCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR GCA 90 bp TGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTGAATATTATCCACCTGGGGACTaGTGTCTTGCCGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: WALVGLVRSDRAVLAPEYYPPGD*CLAVRP
Trigger: AGGTCTCACGGCAAGACAGCAGTCCCCAGGTGGATA...ATATTCAGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp GCGGGAGTGAGGCTGAACCTTCTCTGTCAGGCAGGGCTGAAGTTCTCTTCTAGCAGGCTTTGTGATCGGTaGCCACCTCGCGGGTCATGG +
Preference number: 4 (lower is better)
Translates to: AGVRLNLLCQAGLKFSSSRLCDR*PPRGSW
Trigger: CCATGACCCGCGAGGTGGCCACCGATCACAAAGCCT...GCTAGAAGAGAACTTCAGCCCTGCCTGACAGAGAAGGTTCAGCCTCACTCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp GAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAGCCGTGGCAGCGAGCTaGCCCTCGGGGCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: EAASSQQMRVYLVLGAVPAVAAS*PSGPGL
Trigger: CAGACCAGGCCCCGAGGGCCAGCTCGCTGCCACGGC...TGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR TCA 90 bp AGCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCAGTTTCCACATCTGTaGAATGGGCATCCATCATGG +
Preference number: 4 (lower is better)
Translates to: SLSAPRSQHLGAGGVGEIQFPHL*NGHPSW
Trigger: CCATGATGGATGCCCATTTCACAGATGTGGAAACTG...GATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp TGGCGCATGTACAGGCCAATGGCGTTGACCACGGCAGCACTCTTTTCTTCGTCGCGAAAATCTGGAACCTaGGGCTCTCCCCGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: WRMYRPMALTTAALFSSSRKSGT*GSPRFQ
Trigger: CTGGAACCGGGGAGAGCCCCAGGTTCCAGATTTTCG...CGACGAAGAAAAGAGTGCTGCCGTGGTCAACGCCATTGGCCTGTACATGCGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CCA 90 bp CGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACGGGGGCGTCAGCACCTaGTTCCCGGTCTGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RKQQAHSKCVFTWYLVQYGGVST*FPVWAV
Trigger: GACAGCCCAGACCGGGAACCAGGTGCTGACGCCCCC...GTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp GAAGGTGGTGTGGGACTTGGCGGGGCGGAGCCTGACTGTATCCATATGTCCCTCCTTTCTCCCGTTCTGTaGGCTCTTCTGTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: EGGVGLGGAEPDCIHMSLLSPVL*ALLCSA
Trigger: GGCAGAACACAGAAGAGCCCACAGAACGGGAGAAAG...GAGGGACATATGGATACAGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACGCACGGGCCGCAGCATaGTCTTGCCATCGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: RKQQAHSKCVFTWYLVQYARAAA*SCHRAW
Trigger: CCACGCCCGATGGCAAGACCATGCTGCGGCCCGTGC...GTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR TCA 90 bp GAAGAAGTTCCTCCCCGACTTCTTGTCTCCACTCTTGGTCCGCACCCCAAGGTGACAGGCCAATGGCGTTaGCCACGGCAGCACTCTTTT +
Preference number: 4 (lower is better)
Translates to: EEVPPRLLVSTLGPHPKVTGQWR*PRQHSF
Trigger: AAAAGAGTGCTGCCGTGGTCAACGCCATTGGCCTGT...CACCTTGGGGTGCGGACCAAGAGTGGAGACAAGAAGTCGGGGAGGAACTTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR TCA 90 bp AGCGGGCGGCATCCAGGATGCTGCTCAGCCCCTTCTTGGTCTTGGCAGGCTCGTCATCAACCTCTGCTTTaGGGTGTCGAAAATCTGGAA +
Preference number: 4 (lower is better)
Translates to: SGRHPGCCSAPSWSWQARHQPLL*GVENLE
Trigger: TTCCAGATTTTCGACACCTCAAAGCAGAGGTTGATG...ACGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCGCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR GCA 90 bp TGGTCTTGGCAGGCTCGTCCGACCGCCGGTTCCCCATCACCTTTTTCCGGAAGAGATACATCTCAGGGTTaGTGTCTGCATCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: WSWQARPTAGSPSPFSGRDTSQG*CLHLLQ
Trigger: CTGGAGGAGATGCAGACAGCAACCCTGAGATGTATC...TCTTCCGGAAAAAGGTGATGGGGAACCGGCGGTCGGACGAGCCTGCCAAGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR GCA 90 bp GCGGGAGTGAGGCTGAACCTTCTCTGTCAGGCAGGGCTGAAGTTCTCTTCTAGCTATCCACCTGGGGACTaGTGTCTTGCCGTGAGACCT +
Preference number: 4 (lower is better)
Translates to: AGVRLNLLCQAGLKFSSSYPPGD*CLAVRP
Trigger: AGGTCTCACGGCAAGACAGCAGTCCCCAGGTGGATA...GCTAGAAGAGAACTTCAGCCCTGCCTGACAGAGAAGGTTCAGCCTCACTCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp CGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCTGCTCTGCCGAAGGTaGGACAAGTCCAGGCGCCGC +
Preference number: 4 (lower is better)
Translates to: RKQQAHSKCVFTWYLVQYLLCRR*DKSRRR
Trigger: GCGGCGCCTGGACTTGTCCCACCTTCGGCAGAGCAG...GTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACGTCCAGCAGGGGTCCTaGACGCATCGTCGCCACCTC +
Preference number: 4 (lower is better)
Translates to: RKQQAHSKCVFTWYLVQYVQQGS*THRRHL
Trigger: GAGGTGGCGACGATGCGTCCAGGACCCCTGCTGGAC...GTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp AGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTAAATGCGTGTTTACTTaGTACTTGGTGCAGTACCAG +
Preference number: 4 (lower is better)
Translates to: STWALVGLVRSDRAVLAPKCVFT*YLVQYQ
Trigger: CTGGTACTGCACCAAGTACCAAGTAAACACGCATTT...AGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR TCA 90 bp CGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCGCTGGTGGGGTTGGTaGGATCCGACAGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: RKQQAHSKCVFTWYLVQYRWWGW*DPTELS
Trigger: GGACAGCTCTGTCGGATCTCACCAACCCCACCAGCG...GTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp TCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACTGCCGTGGCGGAACTaGGGTCCATGTCCACGTCGC +
Preference number: 4 (lower is better)
Translates to: SEAASSQQMRVYLVLGAVLPWRN*GPCPRR
Trigger: GCGACGTGGACATGGACCCCAGTTCCGCCACGGCAG...TACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
3UTR CAA 72 bp TCTGTAGCACCTGGCTTCTCGGCATCAACCTCTGCTTaGAGGTGTCGAAAATCTGGAACCTGGGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SVAPGFSASTSA*RCRKSGTWGSP
Trigger: GGGAGAGCCCCAGGTTCCAGATTTTCGACACCTCAAAGCAGAGGTTGATGCCGAGAAGCCAGGTGCTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR GCA 90 bp GTTGACCACGGCAGCACTCTTTTCTTCGTCGGTAGAGATGGTATGTCTGTAGGACTTTGCACCACCTCCTaGACGAACCGCCGCTGGACA +
Preference number: 4 (lower is better)
Translates to: VDHGSTLFFVGRDGMSVGLCTTS*TNRRWT
Trigger: TGTCCAGCGGCGGTTCGTGCAGGAGGTGGTGCAAAG...TCCTACAGACATACCATCTCTACCGACGAAGAAAAGAGTGCTGCCGTGGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR GCA 90 bp GCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAGCTCTGTGTTCTGCCCGATaGTCTGCAGGAGCAGGGGGT +
Preference number: 4 (lower is better)
Translates to: AASSQQMRVYLVLGAVPALCSAR*SAGAGG
Trigger: ACCCCCTGCTCCTGCAGAGCATCGGGCAGAACACAG...AGCTGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp TTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCCCTCGGGGCCTGGTCTaGAGAAGGGCAGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LFGSSKLTANACLLGTWCPRGLV*RRAGGH
Trigger: GTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGG...GCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp CTGCGGTTTAACCTTCCCAACCACTCTAGGAGGGAGGTCATTATTGTCCCATTTGAAGCCTCCAGGGGCTaGCCAGGTGAGAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LRFNLPNHSRREVIIVPFEASRG*PGESCL
Trigger: AAGGCAGCTCTCACCTGGGCAGCCCCTGGAGGCTTC...AAATGGGACAATAATGACCTCCCTCCTAGAGTGGTTGGGAAGGTTAAACCGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp GAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCACTCGTCGGTACTCTCTaGGGGCGCCAAGGACTCCAG +
Preference number: 4 (lower is better)
Translates to: EAASSQQMRVYLVLGAVPLVGTL*GRQGLQ
Trigger: CTGGAGTCCTTGGCGCCCCCAGAGAGTACCGACGAG...TGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp GCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAGCTGCTTCACCTGGCTCTTaGGCAGGCTGTGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: AASSQQMRVYLVLGAVPAASPGS*AGCAGC
Trigger: ACACCCTGCACAGCCTGCCCAAGAGCCAGGTGAAGC...AGCTGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp GCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAGCTTTTCCCCAGAGAAGGTaGTGTGGGACTTGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: AASSQQMRVYLVLGAVPAFPQRR*CGTWRG
Trigger: GCCCCGCCAAGTCCCACACCACCTTCTCTGGGGAAA...AGCTGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR GCA 90 bp GTTGACCACGGCAGCACTCTTTTCTTCGTCGGTAGAGATGGTATGTCTGTAGGAGCTACCTGCTGGCTTTaGACCACCTCCTGCACGAAC +
Preference number: 4 (lower is better)
Translates to: VDHGSTLFFVGRDGMSVGATCWL*TTSCTN
Trigger: GTTCGTGCAGGAGGTGGTGCAAAGCCAGCAGGTAGC...TCCTACAGACATACCATCTCTACCGACGAAGAAAAGAGTGCTGCCGTGGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR GCA 90 bp GATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGTCCCGGTCCAGGCTTaGGTGTCCAGCAGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: DYSEAASSQQMRVYLVLGVPVQA*VSSRGP
Trigger: AGGACCCCTGCTGGACACGCAAGCCTGGACCGGGAC...ACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp GAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAGCCGGGAGGCTCTTCTaGTTCAAGCTCCAGTCCCGA +
Preference number: 4 (lower is better)
Translates to: EAASSQQMRVYLVLGAVPAGRLF*FKLQSR
Trigger: TCGGGACTGGAGCTTGAACCAGAAGAGCCTCCCGGC...TGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp ATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCCAGAGAAGGTGGTGTaGGACTTGGCGGGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: IIRKQQAHSKCVFTWYLVPEKVV*DLAGRS
Trigger: GCTCCGCCCCGCCAAGTCCCACACCACCTTCTCTGG...CACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
3UTR CAA 72 bp TCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTaGGTACTTGGTGCAGTACCAGCTGTGCTCCATGCG +
Preference number: 4 (lower is better)
Translates to: SEAASSQQMRVY*VLGAVPAVLHA
Trigger: CGCATGGAGCACAGCTGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR GCA 90 bp GCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAGCTACCAGCTGTGCTCCATaGGCCCTGCGGTTTAACCTT +
Preference number: 4 (lower is better)
Translates to: AASSQQMRVYLVLGAVPATSCAP*ALRFNL
Trigger: AAGGTTAAACCGCAGGGCGCATGGAGCACAGCTGGT...AGCTGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR TCA 90 bp ATGAGATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTGGGAATGCACCTCGATaGGCTCGTCCAGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: MRLFGSSKLTANACLLGTGNAPR*ARPGWG
Trigger: TCCCCAGCCTGGACGAGCTCATCGAGGTGCATTCCC...AGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR TCA 90 bp TCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACACGCACGGCTTGGTTaGCGTGGTGTAGAATTTCCC +
Preference number: 4 (lower is better)
Translates to: SEAASSQQMRVYLVLGAVHARLG*RGVEFP
Trigger: GGGAAATTCTACACCACGTCAACCAAGCCGTGCGTG...TACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp TTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCTCGCTGATGACCTCCTaGCGCTTCACCTGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: LFGSSKLTANACLLGTWCSLMTS*RFTWLL
Trigger: CAAGAGCCAGGTGAAGCGGCAGGAGGTCATCAGCGA...GCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp GCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAGCTCAAATGACTGGCGGCTaGAGAAGCGGGAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: AASSQQMRVYLVLGAVPAQMTGG*RSGRRF
Trigger: AAATCTCCTCCCGCTTCTGCAGCCGCCAGTCATTTG...AGCTGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp TCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACGAGGGTCCTTGCGTTaGTTGGCTTTGAGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: SEAASSQQMRVYLVLGAVRGSLR*LALSCS
Trigger: AGAGCAGCTCAAAGCCAAGCAACGCAAGGACCCTCG...TACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp TCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACACATGCACCTCCACTaGCTTGTCCTTAGTCACCCG +
Preference number: 4 (lower is better)
Translates to: SEAASSQQMRVYLVLGAVHMHLH*LVLSHP
Trigger: CGGGTGACTAAGGACAAGGCAGTGGAGGTGCATGTG...TACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp TTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCATCTCCTATCCAGGCTaGGTGTGTGCGGGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: LFGSSKLTANACLLGTWCISYPG*VCAGPC
Trigger: ACACGGACCCGCACACACGCAGCCTGGATAGGAGAT...GCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR GCA 90 bp GCGGGAGTGAGGCTGAACCTTCTCTGTCAGGCAGGGCTGAAGTTCTCTTCTAGCCAAGCTCACAGCAAATaGGTGTTTACTTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: AGVRLNLLCQAGLKFSSSQAHSK*VFTWYL
Trigger: CAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTG...GCTAGAAGAGAACTTCAGCCCTGCCTGACAGAGAAGGTTCAGCCTCACTCCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp TTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCGCCGCTGCATCTCCGTaGGGATCATGTCCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LFGSSKLTANACLLGTWCAAASP*GSCPSA
Trigger: AGCTGAAGGACATGATCCCCACGGAGATGCAGCGGC...GCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp GATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTCACCCGCCACGTCAGTaGGCCCTCGTGGACCAATTT +
Preference number: 4 (lower is better)
Translates to: DYSEAASSQQMRVYLVLGHPPRQ*ALVDQF
Trigger: AAATTGGTCCACGAGGGCCCACTGACGTGGCGGGTG...ACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp ATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGGGATGGGGTGCTTCCTaGGCGGGAACCTCAAGTGCA +
Preference number: 4 (lower is better)
Translates to: IIRKQQAHSKCVFTWYLVGWGAS*AGTSSA
Trigger: TGCACTTGAGGTTCCCGCCCAGGAAGCACCCCATCC...CACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp GATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTATAGGGTCGCTGCTCTaGCGAAGGTGGGACAAGTCC +
Preference number: 4 (lower is better)
Translates to: DYSEAASSQQMRVYLVLGIGSLL*RRWDKS
Trigger: GGACTTGTCCCACCTTCGGCAGAGCAGCGACCCTAT...ACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACTATATCTGGGCCTCCTaGTCCCAGGTAAAAAGGACG +
Preference number: 4 (lower is better)
Translates to: RKQQAHSKCVFTWYLVQYYIWAS*SQVKRT
Trigger: CGTCCTTTTTACCTGGGACCAGGAGGCCCAGATATA...GTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACAATGGGCATCCATCATaGCAGTTCCTACCTCACAGG +
Preference number: 4 (lower is better)
Translates to: RKQQAHSKCVFTWYLVQYNGHPS*QFLPHR
Trigger: CCTGTGAGGTAGGAACTGCCATGATGGATGCCCATT...GTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR TCA 90 bp CGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAGTTTCCACATCTGTaGAATGGGCATCCATCATGG +
Preference number: 4 (lower is better)
Translates to: RKQQAHSKCVFTWYLVQYQFPHL*NGHPSW
Trigger: CCATGATGGATGCCCATTTCACAGATGTGGAAACTG...GTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR TCA 90 bp TTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCGCAGATGAGGAAACTTaGGGCTCGGGGATGTTTAGC +
Preference number: 4 (lower is better)
Translates to: LFGSSKLTANACLLGTWCADEET*GSGMFS
Trigger: GCTAAACATCCCCGAGCCTCAAGTTTCCTCATCTGC...GCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR GCA 90 bp ATGAGATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTATCTCCTATCCAGGCTaGGTGTGTGCGGGTCCGTGT +
Preference number: 4 (lower is better)
Translates to: MRLFGSSKLTANACLLGTISYPG*VCAGPC
Trigger: ACACGGACCCGCACACACGCAGCCTGGATAGGAGAT...AGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR GCA 90 bp GCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAGCTTTACTTGGTACTTGGTaGAGTACCAGCTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: AASSQQMRVYLVLGAVPALLGTW*STSCAP
Trigger: TGGAGCACAGCTGGTACTGCACCAAGTACCAAGTAA...AGCTGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp TTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCGTCAGTGGGCCCTCGTaGACCAATTTCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LFGSSKLTANACLLGTWCVSGPS*TNFFLV
Trigger: CACCAAGAAGAAATTGGTCCACGAGGGCCCACTGAC...GCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR TCA 90 bp ATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGTCTGTCAGGCAGGGCTaGAGTTCTCTTCTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: IIRKQQAHSKCVFTWYLVSVRQG*SSLLAS
Trigger: AGAGGCTAGAAGAGAACTTCAGCCCTGCCTGACAGA...CACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR GCA 90 bp TTCTTAATATTTTTAATGAGATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGAGGCTCATTGGGCCCTaGGGGGATGAGTCCCCCAGC +
Preference number: 4 (lower is better)
Translates to: FLIFLMRLFGSSKLTANARLIGP*GDESPS
Trigger: GCTGGGGGACTCATCCCCGCAGGGCCCAATGAGCCT...CGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATCTCATTAAAAATATTAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp TCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTATGCTTGGCTTTGAGCTaGTCTAAGGCAAATGACTGG +
Preference number: 4 (lower is better)
Translates to: SEAASSQQMRVYLVLGAVCLALS*SKANDW
Trigger: CCAGTCATTTGCCTTAGAGCAGCTCAAAGCCAAGCA...TACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp TTCTTAATATTTTTAATGAGATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGATCATGTCCTTCAGCTaGAGGCGGCGGCACCGCGGG +
Preference number: 4 (lower is better)
Translates to: FLIFLMRLFGSSKLTANAIMSFS*RRRHRG
Trigger: CCCGCGGTGCCGCCGCCTGCAGCTGAAGGACATGAT...CGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATCTCATTAAAAATATTAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp CGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACTGTTTACTTGGTACTTaGTGCAGTACCAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RKQQAHSKCVFTWYLVQYCLLGT*CSTSCA
Trigger: AGCACAGCTGGTACTGCACCAAGTACCAAGTAAACA...GTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR TCA 90 bp TTCTTAATATTTTTAATGAGATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGCGCTGGTGGGGTTGGTaGGATCCGACAGAGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FLIFLMRLFGSSKLTANARWWGW*DPTELS
Trigger: GGACAGCTCTGTCGGATCTCACCAACCCCACCAGCG...CGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATCTCATTAAAAATATTAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR TCA 90 bp ATATTTTTAATGAGATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACCTCACAGGTGGTGGTaGGGATGGGGTGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: IFLMRLFGSSKLTANACLPHRWW*GWGASW
Trigger: CCAGGAAGCACCCCATCCTCACCACCACCTGTGAGG...TAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATCTCATTAAAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR GCA 90 bp GCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAGCTCAAGCTCACAGCAAATaGGTGTTTACTTGGTACTTG +
Preference number: 4 (lower is better)
Translates to: AASSQQMRVYLVLGAVPAQAHSK*VFTWYL
Trigger: CAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTG...AGCTGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp GAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCATCCACATCTGTGAAATaGGCATCCATCATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: EAASSQQMRVYLVLGAVPSTSVK*ASIMAV
Trigger: AACTGCCATGATGGATGCCCATTTCACAGATGTGGA...TGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR TCA 90 bp TTCTTAATATTTTTAATGAGATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGGCCGCTGATAGTCCTTaGGCCTCAGCAGGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FLIFLMRLFGSSKLTANAAADSP*ASAGPP
Trigger: TGGAGGACCTGCTGAGGCTCAAGGACTATCAGCGGC...CGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATCTCATTAAAAATATTAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CCA 90 bp TCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTAAAATGCGTGTTTACTTaGTACTTGGTGCAGTACCAG +
Preference number: 4 (lower is better)
Translates to: SEAASSQQMRVYLVLGAVKCVFT*YLVQYQ
Trigger: CTGGTACTGCACCAAGTACCAAGTAAACACGCATTT...TACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CCA 90 bp ATGAGATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTCCACATCTGTGAAATaGGCATCCATCATGGCAGTT +
Preference number: 4 (lower is better)
Translates to: MRLFGSSKLTANACLLGTSTSVK*ASIMAV
Trigger: AACTGCCATGATGGATGCCCATTTCACAGATGTGGA...AGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR TCA 90 bp ATATTTTTAATGAGATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTAGCAGATGAGGAAACTTaGGGCTCGGGGATGTTTAGC +
Preference number: 4 (lower is better)
Translates to: IFLMRLFGSSKLTANACLADEET*GSGMFS
Trigger: GCTAAACATCCCCGAGCCTCAAGTTTCCTCATCTGC...TAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATCTCATTAAAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR GCA 90 bp ATATTTTTAATGAGATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTAGAAGAACAGGCATTCTaGCATGGGCTGGAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: IFLMRLFGSSKLTANACLEEQAF*HGLEEE
Trigger: CTCTTCTTCCAGCCCATGGCAGAATGCCTGTTCTTC...TAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAATCTCATTAAAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS CCA 90 bp CTCCAGGCTCGGGGGTGGCTCGTCGGGCAGGGCCAAGCACTGCCGTaGCGGAACTGGGGTCCATGTCCACGTCGCTCCGGGAGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: LQARGWLVGQGQALP*RNWGPCPRRSGSGP
Trigger: GGGGCCGCTCCCGGAGCGACGTGGACATGGACCCCAGTTCCGCCACGGCAGTGCTTGGCCCTGCCCGACGAGCCACCCCCGAGCCTGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594258.1
ENST00000594521.5
ENST00000599589.5
ENST00000599846.5
CDS CCA 90 bp CATACGTGGCTCGTCGGGCAGGGCCAAGCACTGCCGTGGCGGAACTaGGGTCCATGTCCACGTCGCTCCGGGAGCGGCCCCCACCCCGGC +
Preference number: 5 (lower is better)
Translates to: HTWLVGQGQALPWRN*GPCPRRSGSGPHPG
Trigger: GCCGGGGTGGGGGCCGCTCCCGGAGCGACGTGGACATGGACCCCAGTTCCGCCACGGCAGTGCTTGGCCCTGCCCGACGAGCCACGTATG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS GCA 90 bp CTCATCTCCAGGCTCGGGGGTGGCTCGTCGGGCAGGGCCAAGCACTaGCGTGGCGGAACTGGGGTCCATGTCCACGTCGCTCCGGGAGCG +
Preference number: 5 (lower is better)
Translates to: LISRLGGGSSGRAKH*RGGTGVHVHVAPGA
Trigger: CGCTCCCGGAGCGACGTGGACATGGACCCCAGTTCCGCCACGGCAGTGCTTGGCCCTGCCCGACGAGCCACCCCCGAGCCTGGAGATGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594258.1
ENST00000594521.5
ENST00000599589.5
ENST00000599846.5
CDS TCA 90 bp ATGAGAGCACACCAGCGGTGGCCACCTCGCGGGTCATGGCGGAGGTaGGCCGCAGCACGGGCCGCAGCATGGTCTTGCCATCGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: MRAHQRWPPRGSWRR*AAARAAAWSCHRAW
Trigger: CCACGCCCGATGGCAAGACCATGCTGCGGCCCGTGCTGCGGCTCACCTCCGCCATGACCCGCGAGGTGGCCACCGCTGGTGTGCTCTCAT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS GCA 90 bp GGCACCCGGAGAACCAGGGGTCCTGGCTCAAACTGCAGGGCCACGTaGTGCAGGAGGGCCATGAGGTGGGCTGGGCGCCGCTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: GTRRTRGPGSNCRAT*CRRAMRWAGRRFTC
Trigger: GCAGGTGAAGCGGCGCCCAGCCCACCTCATGGCCCTCCTGCAGCACGTGGCCCTGCAGTTTGAGCCAGGACCCCTGGTTCTCCGGGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347545.8
ENST00000378152.8
CDS GCA 90 bp AGCCCTGCCCTCACCAGGGGTCCTGGCTCAAACTGCAGGGCCACGTaGTGCAGGAGGGCCATGAGGTGGGCTGGGCGCCGCTTCACCTGC +
Preference number: 5 (lower is better)
Translates to: SPALTRGPGSNCRAT*CRRAMRWAGRRFTC
Trigger: GCAGGTGAAGCGGCGCCCAGCCCACCTCATGGCCCTCCTGCAGCACGTGGCCCTGCAGTTTGAGCCAGGACCCCTGGTGAGGGCAGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 90 bp CAGGCTGCGTGTGTGCGGGTCCGTGTTCCAGTCCCGGTCCAGGCTTaGGTGTCCAGCAGGGGTCCTGGACGCATCGTCGCCACCTCCACC +
Preference number: 5 (lower is better)
Translates to: QAACVRVRVPVPVQA*VSSRGPGRIVATST
Trigger: GGTGGAGGTGGCGACGATGCGTCCAGGACCCCTGCTGGACACGCAAGCCTGGACCGGGACTGGAACACGGACCCGCACACACGCAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594417.1
ENST00000595770.1
ENST00000599589.5
CDS TCA 90 bp AGAAGGCTTTGTGATCGGTGGCCACCTCGCGGGTCATGGCGGAGGTaGGCCGCAGCACGGGCCGCAGCATGGTCTTGCCATCGGGCGTGG +
Preference number: 5 (lower is better)
Translates to: RRLCDRWPPRGSWRR*AAARAAAWSCHRAW
Trigger: CCACGCCCGATGGCAAGACCATGCTGCGGCCCGTGCTGCGGCTCACCTCCGCCATGACCCGCGAGGTGGCCACCGATCACAAAGCCTTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 90 bp GATGCAGGCCGGGAGGACTGCCAGGAACCCTGGTCTAAGCGAGGGTaGTGGGGAAGGCCTGGGTCAGCAGCTGCCCTCAGGGCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: DAGREDCQEPWSKRG*WGRPGSAAALRAEA
Trigger: AGCCTCTGCCCTGAGGGCAGCTGCTGACCCAGGCCTTCCCCAGCACCCTCGCTTAGACCAGGGTTCCTGGCAGTCCTCCCGGCCTGCATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596957.1
ENST00000600274.5
CDS GCA 90 bp AGGGAGAGGGTTGACATACGTGGCTCGTCGGGCAGGGCCAAGCACTaGCGTGGCGGAACTGGGGTCCATGTCCACGTCGCTCCGGGAGCG +
Preference number: 5 (lower is better)
Translates to: RERVDIRGSSGRAKH*RGGTGVHVHVAPGA
Trigger: CGCTCCCGGAGCGACGTGGACATGGACCCCAGTTCCGCCACGGCAGTGCTTGGCCCTGCCCGACGAGCCACGTATGTCAACCCTCTCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS CCA 90 bp CGCAGCATGGTCTTGCCATCGGGCGTGGGCGTCAGTGTCCGGCTATaGGACTTGAGCAGCAGCCGCTCGTCCTGGCGCTGGAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RSMVLPSGVGVSVRL*DLSSSRSSWRWSSS
Trigger: GCTGCTGCTCCAGCGCCAGGACGAGCGGCTGCTGCTCAAGTCCCATAGCCGGACACTGACGCCCACGCCCGATGGCAAGACCATGCTGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
ENST00000600517.1
CDS CCA 90 bp CCGTGTTCCAGTCCCGGTCCAGGCTTGCGTGTCCAGCAGGGGTCCTaGACGCATCGTCGCCACCTCCACCTCGCGCCTGTCCGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: PCSSPGPGLRVQQGS*THRRHLHLAPVRLS
Trigger: GGACAAACGGACAGGCGCGAGGTGGAGGTGGCGACGATGCGTCCAGGACCCCTGCTGGACACGCAAGCCTGGACCGGGACTGGAACACGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000595770.1
CDS-3UTR CAA 90 bp CTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGAGGCCGCAGCATGGTCTaGCCATCGGGCGTGGGCGTC +
Preference number: 5 (lower is better)
Translates to: LSAPRSQHLGAGGVGEIRGRSMV*PSGVGV
Trigger: GACGCCCACGCCCGATGGCAAGACCATGCTGCGGCC...TCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CAA 90 bp CCCTCGGGGCCTGGTCTGCAGAAGGGCAGGAGGTCACTGAGGATTCTCTCGGTCGGCCGCAGCATGGTCTaGCCATCGGGCGTGGGCGTC +
Preference number: 5 (lower is better)
Translates to: PSGPGLQKGRRSLRILSVGRSMV*PSGVGV
Trigger: GACGCCCACGCCCGATGGCAAGACCATGCTGCGGCC...GACCGAGAGAATCCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS GCA 90 bp AGCCGCTTGGAACGGAAGTCCTCCAGCTGCCGGCCCACGGCTACCTaGTGGCTTTGCACCACCTCCTGCACGAACCGCCGCTGGACATCC +
Preference number: 5 (lower is better)
Translates to: SRLERKSSSCRPTAT*WLCTTSCTNRRWTS
Trigger: GGATGTCCAGCGGCGGTTCGTGCAGGAGGTGGTGCAAAGCCAGCAGGTAGCCGTGGGCCGGCAGCTGGAGGACTTCCGTTCCAAGCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000599846.5
ENST00000600274.5
CDS GCA 90 bp CAGGGCGTCATGCCCATGAGCCGCTTGGAACGGAAGTCCTCCAGCTaGCGGCCCACGGCTACCTGCTGGCTTTGCACCACCTCCTGCACG +
Preference number: 5 (lower is better)
Translates to: QGVMPMSRLERKSSS*RPTATCWLCTTSCT
Trigger: CGTGCAGGAGGTGGTGCAAAGCCAGCAGGTAGCCGTGGGCCGGCAGCTGGAGGACTTCCGTTCCAAGCGGCTCATGGGCATGACGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000598812.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp CGCTTGGAACGGAAGTCCTCCAGCTGCCGGCCCACGGCTACCTGCTaGCTTTGCACCACCTCCTGCACGAACCGCCGCTGGACATCCTCG +
Preference number: 5 (lower is better)
Translates to: RLERKSSSCRPTATC*LCTTSCTNRRWTSS
Trigger: CGAGGATGTCCAGCGGCGGTTCGTGCAGGAGGTGGTGCAAAGCCAGCAGGTAGCCGTGGGCCGGCAGCTGGAGGACTTCCGTTCCAAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp CTCCTGCCGCTTCACCTGGCTCTTGGGCAGGCTGTGCAGGGTGTCTaGGGGGACGAGTTCCCGCCAGCCGGGAGGCTCTTCTGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: LLPLHLALGQAVQGV*GDEFPPAGRLFWFK
Trigger: CTTGAACCAGAAGAGCCTCCCGGCTGGCGGGAACTCGTCCCCCCAGACACCCTGCACAGCCTGCCCAAGAGCCAGGTGAAGCGGCAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000594521.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp ATGGGCTGGAAGAAGAGGTCGTGCAGCACCCGCAGCATGCGCACGTaGGCCGCCTCTGTCACCAGCAGCTCGCTGATGACCTCCTGCCGC +
Preference number: 5 (lower is better)
Translates to: MGWKKRSCSTRSMRT*AASVTSSSLMTSCR
Trigger: GCGGCAGGAGGTCATCAGCGAGCTGCTGGTGACAGAGGCGGCCCACGTGCGCATGCTGCGGGTGCTGCACGACCTCTTCTTCCAGCCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594258.1
ENST00000594521.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp GGCGTCAGTGTCCGGCTATGGGACTTGAGCAGCAGCCGCTCGTCCTaGCGCTGGAGCAGCAGCAGCAGGTCGTCCAGCAGCAGCACATGC +
Preference number: 5 (lower is better)
Translates to: GVSVRLWDLSSSRSS*RWSSSSRSSSSSTC
Trigger: GCATGTGCTGCTGCTGGACGACCTGCTGCTGCTGCTCCAGCGCCAGGACGAGCGGCTGCTGCTCAAGTCCCATAGCCGGACACTGACGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
ENST00000600517.1
CDS CCA 90 bp CAGCACTTTCCGAAGGGCCGTGGCAGCGAGCTGGCCCTCGGGGCCTaGTCTGCAGAAGGGCAGGAGGTCACTGAGGATTCTCTCGGTCCG +
Preference number: 5 (lower is better)
Translates to: QHFPKGRGSELALGA*SAEGQEVTEDSLGP
Trigger: CGGACCGAGAGAATCCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000595723.5
ENST00000595897.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp AGCTGCTTCAGGGACAGCACTTTCCGAAGGGCCGTGGCAGCGAGCTaGCCCTCGGGGCCTGGTCTGCAGAAGGGCAGGAGGTCACTGAGG +
Preference number: 5 (lower is better)
Translates to: SCFRDSTFRRAVAAS*PSGPGLQKGRRSLR
Trigger: CCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAGTGCTGTCCCTGAAGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000595723.5
ENST00000595897.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp CCGTGTTCCAGTCCCGGTCCAGGCTTGCGTGTCCAGCAGGGGTCCTaGACGCATCGTCGCCACCTCCACCTCGCGCCTGCATTCAAGTCC +
Preference number: 5 (lower is better)
Translates to: PCSSPGPGLRVQQGS*THRRHLHLAPAFKS
Trigger: GGACTTGAATGCAGGCGCGAGGTGGAGGTGGCGACGATGCGTCCAGGACCCCTGCTGGACACGCAAGCCTGGACCGGGACTGGAACACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CAA 90 bp CAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTGGGCGCTGGTGGGGTaGGTGAGATCCGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: QHLGAGGVGEIRQSCPGPWALVG*VRSDRA
Trigger: AGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCA...GGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CAA 90 bp TCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCAGTCCCGGTCCAGGCTaGCGTGTCCAGCAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: SQHLGAGGVGEIRQSCPGSPGPG*RVQQGS
Trigger: GGACCCCTGCTGGACACGCAAGCCTGGACCGGGACT...GCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CAA 90 bp CTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCAAGGTGGTGTGGGACTaGGCGGGGCGGAGCCTGACT +
Preference number: 5 (lower is better)
Translates to: LSTWALVGLVRSDRAVLAKVVWD*AGRSLT
Trigger: AGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTT...GGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS TCA 90 bp TGGTTTCTGCCAGGCTGCTGGACTCTCTGTGGCTCCGCGGGGTCCTaGCGTGTGTACCCTGCCCGCTGCGCACTGAGATCTACCCTGGGC +
Preference number: 5 (lower is better)
Translates to: WFLPGCWTLCGSAGS*RVYPARCALRSTLG
Trigger: GCCCAGGGTAGATCTCAGTGCGCAGCGGGCAGGGTACACACGTCAGGACCCCGCGGAGCCACAGAGAGTCCAGCAGCCTGGCAGAAACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 90 bp GAACGGAAGTCCTCCAGCTGCCGGCCCACGGCTACCTGCTGGCTTTaGACCACCTCCTGCACGAACCGCCGCTGGACATCCTCGGAGATG +
Preference number: 5 (lower is better)
Translates to: ERKSSSCRPTATCWL*TTSCTNRRWTSSEM
Trigger: CATCTCCGAGGATGTCCAGCGGCGGTTCGTGCAGGAGGTGGTGCAAAGCCAGCAGGTAGCCGTGGGCCGGCAGCTGGAGGACTTCCGTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000599846.5
ENST00000600274.5
CDS GCA 90 bp GCGTCAGCACCTGGTTCCCGGTCTGGGCTGTCCAGGGACAGAGGGTaGAGAGAGACTCCAGGGGTGTCCTGCCCAGGAGCCCCGATATTC +
Preference number: 5 (lower is better)
Translates to: ASAPGSRSGLSRDRG*RETPGVSCPGAPIF
Trigger: GAATATCGGGGCTCCTGGGCAGGACACCCCTGGAGTCTCTCTGCACCCTCTGTCCCTGGACAGCCCAGACCGGGAACCAGGTGCTGACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594521.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
ENST00000617585.1
CDS CCA 90 bp AGTGTCCGGCTATGGGACTTGAGCAGCAGCCGCTCGTCCTGGCGCTaGAGCAGCAGCAGCAGGTCGTCCAGCAGCAGCACATGCACCTCC +
Preference number: 5 (lower is better)
Translates to: SVRLWDLSSSRSSWR*SSSSRSSSSSTCTS
Trigger: GGAGGTGCATGTGCTGCTGCTGGACGACCTGCTGCTGCTGCTCCAGCGCCAGGACGAGCGGCTGCTGCTCAAGTCCCATAGCCGGACACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp AACTCCTTTCCGAAGGGCCGTGGCAGCGAGCTGGCCCTCGGGGCCTaGTCTGCAGAAGGGCAGGAGGTCACTGAGGATTCTCTCGGTCCG +
Preference number: 5 (lower is better)
Translates to: NSFPKGRGSELALGA*SAEGQEVTEDSLGP
Trigger: CGGACCGAGAGAATCCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAGGAGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378152.8
ENST00000599589.5
CDS-3UTR CAA 90 bp AGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCCCCTAGGACTCCAGGCTCATaGGGCCCTGCGGGGATGAGT +
Preference number: 5 (lower is better)
Translates to: STWALVGLVRSDRAVLAPRTPGS*GPAGMS
Trigger: ACTCATCCCCGCAGGGCCCAATGAGCCTGGAGTCCT...AGGGGCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CAA 90 bp TCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCGTCCGGCTATGGGACTaGAGCAGCAGCCGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: SQHLGAGGVGEIRQSCPGVRLWD*SSSRSS
Trigger: GGACGAGCGGCTGCTGCTCAAGTCCCATAGCCGGAC...GCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CAA 90 bp TCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGCTGTCCTGGCAAGGTGGTGTGGGACTaGGCGGGGCGGAGCCTGACT +
Preference number: 5 (lower is better)
Translates to: SQHLGAGGVGEIRQSCPGKVVWD*AGRSLT
Trigger: AGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTT...GCCAGGACAGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS TCA 90 bp GTGGCTCCGCGGGGTCCTGACGTGTGTACCCTGCCCGCTGCGCACTaGGATCTACCCTGGGCACTTGTAAGCCTGTTGAGGTCACGTGGC +
Preference number: 5 (lower is better)
Translates to: VAPRGPDVCTLPAAH*DLPWALVSLLRSRG
Trigger: GCCACGTGACCTCAACAGGCTTACAAGTGCCCAGGGTAGATCTCAGTGCGCAGCGGGCAGGGTACACACGTCAGGACCCCGCGGAGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 90 bp GAGCAGCAGCAGCAGGTCGTCCAGCAGCAGCACATGCACCTCCACTaGCTTGTCCTTAGTCACCCGCCACGTCAGTGGGCCCTCGTGGAC +
Preference number: 5 (lower is better)
Translates to: EQQQQVVQQQHMHLH*LVLSHPPRQWALVD
Trigger: GTCCACGAGGGCCCACTGACGTGGCGGGTGACTAAGGACAAGGCAGTGGAGGTGCATGTGCTGCTGCTGGACGACCTGCTGCTGCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 90 bp CCAGCAGGGGTCCTGGACGCATCGTCGCCACCTCCACCTCGCGCCTaGATTCAAGTCCAGGCTCACCTCATCCCTGTGGGACTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: PAGVLDASSPPPPRA*IQVQAHLIPVGLWP
Trigger: TGGCCAAAGTCCCACAGGGATGAGGTGAGCCTGGACTTGAATGCAGGCGCGAGGTGGAGGTGGCGACGATGCGTCCAGGACCCCTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS CCA 90 bp AGAGTGGGATGGGATGTGGTTTCTGCCAGGCTGCTGGACTCTCTGTaGCTCCGCGGGGTCCTGACGTGTGTACCCTGCCCGCTGCGCACT +
Preference number: 5 (lower is better)
Translates to: RVGWDVVSARLLDSL*LRGVLTCVPCPLRT
Trigger: AGTGCGCAGCGGGCAGGGTACACACGTCAGGACCCCGCGGAGCCACAGAGAGTCCAGCAGCCTGGCAGAAACCACATCCCATCCCACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 90 bp CAGGACAGGGACAGAGACGGGGAGAGACCAGGGCAGGGACAGAGGTaGGGAGAGGCCAGGGCAGGGACAGAAATTGGGGAGAGACGAGGA +
Preference number: 5 (lower is better)
Translates to: QDRDRDGERPGQGQR*GEARAGTEIGERRG
Trigger: TCCTCGTCTCTCCCCAATTTCTGTCCCTGCCCTGGCCTCTCCCCACCTCTGTCCCTGCCCTGGTCTCTCCCCGTCTCTGTCCCTGTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS-3UTR CAA 90 bp GCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCTGCACCTCCACTGCCTaGTCCTTAGTCACCCGCCAC +
Preference number: 5 (lower is better)
Translates to: ASQHLGLSTWALVGLVRSCTSTA*SLVTRH
Trigger: GTGGCGGGTGACTAAGGACAAGGCAGTGGAGGTGCA...GGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS GCA 90 bp GTCGCCACCTCCACCTCGCGCCTGTCCGTTTGTCCGCGCGTCCACTaGATTCAAGTCCAGGCTCACCTCATCCCTGTGGGACTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: VATSTSRLSVCPRVH*IQVQAHLIPVGLWP
Trigger: TGGCCAAAGTCCCACAGGGATGAGGTGAGCCTGGACTTGAATGCAGTGGACGCGCGGACAAACGGACAGGCGCGAGGTGGAGGTGGCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594417.1
CDS CCA 90 bp AAAATTCCTCCTCCAACTCCTTTCCGAAGGGCCGTGGCAGCGAGCTaGCCCTCGGGGCCTGGTCTGCAGAAGGGCAGGAGGTCACTGAGG +
Preference number: 5 (lower is better)
Translates to: KIPPPTPFRRAVAAS*PSGPGLQKGRRSLR
Trigger: CCTCAGTGACCTCCTGCCCTTCTGCAGACCAGGCCCCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAGGAGTTGGAGGAGGAATTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378152.8
ENST00000599589.5
CDS CCA 90 bp CAGAGGTCGAGGCCGGGAGACAGGGAGACAGAGAGGCCCAGACAATaGAAGACACAGAGGCCTGGAGACAGGAGACAGACGGGGCAGTGG +
Preference number: 5 (lower is better)
Translates to: QRSRPGDRETERPRQ*KTQRPGDRRQTGQW
Trigger: CCACTGCCCCGTCTGTCTCCTGTCTCCAGGCCTCTGTGTCTTCCATTGTCTGGGCCTCTCTGTCTCCCTGTCTCCCGGCCTCGACCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598587.1
CDS CCA 90 bp AAGGTGCTGCCACAGGCTGATGGGGGCGCTGCCACAGGCACAGAGTaGGATGGGATGTGGTTTCTGCCAGGCTGCTGGACTCTCTGTGGC +
Preference number: 5 (lower is better)
Translates to: KVLPQADGGAATGTE*DGMWFLPGCWTLCG
Trigger: GCCACAGAGAGTCCAGCAGCCTGGCAGAAACCACATCCCATCCCACTCTGTGCCTGTGGCAGCGCCCCCATCAGCCTGTGGCAGCACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 90 bp GCGTTCAACCCCGGTCAGTGGCCTTGGCATTCGATGCCCGCAGGGTaGCCCGTGCAGCAGACCAGGTCTCTAGATCGGACCACACTAGAG +
Preference number: 5 (lower is better)
Translates to: AFNPGQWPWHSMPAG*PVQQTRSLDRTTLE
Trigger: CTCTAGTGTGGTCCGATCTAGAGACCTGGTCTGCTGCACGGGCCACCCTGCGGGCATCGAATGCCAAGGCCACTGACCGGGGTTGAACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS CCA 90 bp AGCAGCCTTCAGCCTCTTAGAGCGTTCAACCCCGGTCAGTGGCCTTaGCATTCGATGCCCGCAGGGTGGCCCGTGCAGCAGACCAGGTCT +
Preference number: 5 (lower is better)
Translates to: SSLQPLRAFNPGQWP*HSMPAGWPVQQTRS
Trigger: AGACCTGGTCTGCTGCACGGGCCACCCTGCGGGCATCGAATGCCAAGGCCACTGACCGGGGTTGAACGCTCTAAGAGGCTGAAGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS CCA 90 bp CCAAGAAGCAGCCTTCAGCCTCTTAGAGCGTTCAACCCCGGTCAGTaGCCTTGGCATTCGATGCCCGCAGGGTGGCCCGTGCAGCAGACC +
Preference number: 5 (lower is better)
Translates to: PRSSLQPLRAFNPGQ*PWHSMPAGWPVQQT
Trigger: GGTCTGCTGCACGGGCCACCCTGCGGGCATCGAATGCCAAGGCCACTGACCGGGGTTGAACGCTCTAAGAGGCTGAAGGCTGCTTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS-3UTR CAA 90 bp TGGTCTTGGCAGGCTCGTCCGACCGCCGGTTCCCCATCACCTTTTTCCGGAAGAAGCCCCTTCTTGGTCTaGGCAGGCTCGTCCGACCGC +
Preference number: 5 (lower is better)
Translates to: WSWQARPTAGSPSPFSGRSPFLV*AGSSDR
Trigger: GCGGTCGGACGAGCCTGCCAAGACCAAGAAGGGGCT...TCTTCCGGAAAAAGGTGATGGGGAACCGGCGGTCGGACGAGCCTGCCAAGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CAA 90 bp TCTGCAGAAGGGCAGGAGGTCACTGAGGATTCTCTCGGTCCGGGCATCAGCTGGGTCCGGCTATGGGACTaGAGCAGCAGCCGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: SAEGQEVTEDSLGPGISWVRLWD*SSSRSS
Trigger: GGACGAGCGGCTGCTGCTCAAGTCCCATAGCCGGAC...CCAGCTGATGCCCGGACCGAGAGAATCCTCAGTGACCTCCTGCCCTTCTGCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS TCA 90 bp GTGGTAGAAGTCCAGGAAGGCCTTCTTGGCCTCCTTGGGGCCCAGTaGGCCCAGCATGTCGGCATGCAGACAGCAAAGCAGGGGTCCTGG +
Preference number: 5 (lower is better)
Translates to: VVEVQEGLLGLLGAQ*AQHVGMQTAKQGSW
Trigger: CCAGGACCCCTGCTTTGCTGTCTGCATGCCGACATGCTGGGCTCACTGGGCCCCAAGGAGGCCAAGAAGGCCTTCCTGGACTTCTACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337665.8
ENST00000354532.8
ENST00000599846.5
ENST00000600274.5
CDS TCA 90 bp GTGGTAGAAGTCCAGGAAGGCCTTCTTGGCCTCCTTGGGGCCCAGTaGGCCCAGCATGTCGGCATGCAGACAGCAAAGCTGGTGTCCGCG +
Preference number: 5 (lower is better)
Translates to: VVEVQEGLLGLLGAQ*AQHVGMQTAKLVSA
Trigger: CGCGGACACCAGCTTTGCTGTCTGCATGCCGACATGCTGGGCTCACTGGGCCCCAAGGAGGCCAAGAAGGCCTTCCTGGACTTCTACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596957.1
CDS CCA 90 bp TTCTGCAGCTCCTCCAAGGGGAAGAACAGGCATTCTGCCATGGGCTaGAAGAAGAGGTCGTGCAGCACCCGCAGCATGCGCACGTGGGCC +
Preference number: 5 (lower is better)
Translates to: FCSSSKGKNRHSAMG*KKRSCSTRSMRTWA
Trigger: GGCCCACGTGCGCATGCTGCGGGTGCTGCACGACCTCTTCTTCCAGCCCATGGCAGAATGCCTGTTCTTCCCCTTGGAGGAGCTGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000594521.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp AGACAGGGAGACAGAGAGGCCCAGACAATGGAAGACACAGAGGCCTaGAGACAGGAGACAGACGGGGCAGTGGTGGGGTCGGCACATGCG +
Preference number: 5 (lower is better)
Translates to: RQGDREAQTMEDTEA*RQETDGAVVGSAHA
Trigger: CGCATGTGCCGACCCCACCACTGCCCCGTCTGTCTCCTGTCTCCAGGCCTCTGTGTCTTCCATTGTCTGGGCCTCTCTGTCTCCCTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598587.1
CDS CCA 90 bp ATGGGCTGGAAGAAGAGGTCGTGCAGCACCCGCAGCATGCGCACGTaGGCCGCCTCTGTCACCAGCAGCTCTGTAGTTCCAGCTACTTGG +
Preference number: 5 (lower is better)
Translates to: MGWKKRSCSTRSMRT*AASVTSSSVVPATW
Trigger: CCAAGTAGCTGGAACTACAGAGCTGCTGGTGACAGAGGCGGCCCACGTGCGCATGCTGCGGGTGCTGCACGACCTCTTCTTCCAGCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594044.1
CDS-3UTR CAA 90 bp TGCTGCTCAGCCCCTTCTTGGTCTTGGCAGGCTCGTCCGACCGCCGGTTCCCCATACAGGCCAATGGCGTaGACCACGGCAGCACTCTTT +
Preference number: 5 (lower is better)
Translates to: CCSAPSWSWQARPTAGSPYRPMA*TTAALF
Trigger: AAAGAGTGCTGCCGTGGTCAACGCCATTGGCCTGTA...TGGGGAACCGGCGGTCGGACGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CAA 90 bp CGCACCCCAAGGTGGCGCATGTACAGGCCAATGGCGTTGACCACGGCAGCACTCTTCTTGTCTCCACTCTaGGTCCGCACCCCAAGGTGG +
Preference number: 5 (lower is better)
Translates to: RTPRWRMYRPMALTTAALFLSPL*VRTPRW
Trigger: CCACCTTGGGGTGCGGACCAAGAGTGGAGACAAGAA...GAGTGCTGCCGTGGTCAACGCCATTGGCCTGTACATGCGCCACCTTGGGGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CAA 90 bp GAAGGTGGTGTGGGACTTGGCGGGGCGGAGCCTGACTGTATCCATATGTCCCTCTGGGCGCTGGTGGGGTaGGTGAGATCCGACAGAGCT +
Preference number: 5 (lower is better)
Translates to: EGGVGLGGAEPDCIHMSLWALVG*VRSDRA
Trigger: AGCTCTGTCGGATCTCACCAACCCCACCAGCGCCCA...GAGGGACATATGGATACAGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS TCA 90 bp CAGCACCATCAAACCGGGCCAGCAGCACGTCTCCGATCTCCTCGATaGGGTAGCCACTCTCCTGCCTCCGCTTCATCAGGCGATCGAGGA +
Preference number: 5 (lower is better)
Translates to: QHHQTGPAARLRSPR*GSHSPASASSGDRG
Trigger: TCCTCGATCGCCTGATGAAGCGGAGGCAGGAGAGTGGCTACCTCATCGAGGAGATCGGAGACGTGCTGCTGGCCCGGTTTGATGGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 90 bp CCATATGTCCCTCTGTCCGTGTATCTCCTATCCAGGCTGCGTGTGTaGGGGTCCGTGTTCCAGTCCCGGTCCAGGCTTGCGTGTCCAGCA +
Preference number: 5 (lower is better)
Translates to: PYVPLSVYLLSRLRV*GSVFQSRSRLACPA
Trigger: TGCTGGACACGCAAGCCTGGACCGGGACTGGAACACGGACCCGCACACACGCAGCCTGGATAGGAGATACACGGACAGAGGGACATATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594417.1
ENST00000595770.1
ENST00000599589.5
CDS GCA 90 bp CATGGTGCAGTGCCCTGGCTGTCCCCAGGCTGTCCTCCTATCCTGTaGTGGGCTGGACGGGGTCTTCTTGGGATGAGACCCTTGTCTACA +
Preference number: 5 (lower is better)
Translates to: HGAVPWLSPGCPPIL*WAGRGLLGMRPLST
Trigger: TGTAGACAAGGGTCTCATCCCAAGAAGACCCCGTCCAGCCCAGCACAGGATAGGAGGACAGCCTGGGGACAGCCAGGGCACTGCACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 90 bp ACGGCTACCTGCTGGCTTTGCACCACCTCCTGCACGAACCGCCGCTaGACATCCTCGGAGATGAGGTCAGCCCTAGTGCGGTCAAGTTCA +
Preference number: 5 (lower is better)
Translates to: TATCWLCTTSCTNRR*TSSEMRSALVRSSS
Trigger: TGAACTTGACCGCACTAGGGCTGACCTCATCTCCGAGGATGTCCAGCGGCGGTTCGTGCAGGAGGTGGTGCAAAGCCAGCAGGTAGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp CCCAGGCTGTCCTCCTATCCTGTGCTGGGCTGGACGGGGTCTTCTTaGGATGAGACCCTTGTCTACAGATCCCCTGCCAGCCAGCACTGT +
Preference number: 5 (lower is better)
Translates to: PRLSSYPVLGWTGSS*DETLVYRSPASQHC
Trigger: ACAGTGCTGGCTGGCAGGGGATCTGTAGACAAGGGTCTCATCCCAAGAAGACCCCGTCCAGCCCAGCACAGGATAGGAGGACAGCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 90 bp GGTGCAGTGCCCTGGCTGTCCCCAGGCTGTCCTCCTATCCTGTGCTaGGCTGGACGGGGTCTTCTTGGGATGAGACCCTTGTCTACAGAT +
Preference number: 5 (lower is better)
Translates to: GAVPWLSPGCPPILC*AGRGLLGMRPLSTD
Trigger: ATCTGTAGACAAGGGTCTCATCCCAAGAAGACCCCGTCCAGCCCAGCACAGGATAGGAGGACAGCCTGGGGACAGCCAGGGCACTGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 90 bp TCCAGGCTCGGGGCTGTGGACAGAGGCCTTGTTAGGGCCCCAGCTTaGGCCATCCCAAGAAGCAGCCTTCAGCCTCTTAGAGCGTTCAAC +
Preference number: 5 (lower is better)
Translates to: SRLGAVDRGLVRAPA*AIPRSSLQPLRAFN
Trigger: GTTGAACGCTCTAAGAGGCTGAAGGCTGCTTCTTGGGATGGCCCAAGCTGGGGCCCTAACAAGGCCTCTGTCCACAGCCCCGAGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS-3UTR CAA 90 bp TTGTCTCCACTCTTGGTCCGCACCCCAAGGTGGCGCATGTACAGGCCAATGGCGATGCCCATGAGCCGCTaGGAACGGAAGTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LSPLLVRTPRWRMYRPMAMPMSR*ERKSSS
Trigger: GCTGGAGGACTTCCGTTCCAAGCGGCTCATGGGCAT...CGCCATTGGCCTGTACATGCGCCACCTTGGGGTGCGGACCAAGAGTGGAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CAA 90 bp GCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCTCACGCACGGCTTGGTaGACGTGGTGTAGAATTTCC +
Preference number: 5 (lower is better)
Translates to: ASQHLGLSTWALVGLVRSSRTAW*TWCRIS
Trigger: GGAAATTCTACACCACGTCAACCAAGCCGTGCGTGA...GGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CAA 90 bp CCCAGAGAAGGTGGTGTGGGACTTGGCGGGGCGGAGCCTGACTGTATCCATATGGTCTCTCGGCCACCATaGCCGTTCTCAGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PREGGVGLGGAEPDCIHMVSRPP*PFSELL
Trigger: CAGCAGCTCTGAGAACGGCAATGGTGGCCGAGAGAC...CATATGGATACAGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTTCTCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CAA 90 bp TCTGCAGAAGGGCAGGAGGTCACTGAGGATTCTCTCGGTCCGGGCATCAGCTGGGTCTCTCGGCCACCATaGCCGTTCTCAGAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SAEGQEVTEDSLGPGISWVSRPP*PFSELL
Trigger: CAGCAGCTCTGAGAACGGCAATGGTGGCCGAGAGAC...CCAGCTGATGCCCGGACCGAGAGAATCCTCAGTGACCTCCTGCCCTTCTGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS-3UTR CAA 90 bp CAGCGGGCGGCATCCAGGATGCTGCTCAGCCCCTTCTTGGTCTTGGCAGGCTCGGGATACATCTCAGGGTaGCTGTCTGCATCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: QRAASRMLLSPFLVLAGSGYISG*LSASPP
Trigger: TGGAGGAGATGCAGACAGCAACCCTGAGATGTATCC...CGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAGCATCCTGGATGCCGCCCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS TCA 90 bp CCTGCACGAAGGCACAGAACCGAGGGTCCTTGCGTTGCTTGGCTTTaGGCTGCTCTAAGGCAAATGACTGGCGGCTGCAGAAGCGGGAGG +
Preference number: 5 (lower is better)
Translates to: PARRHRTEGPCVAWL*AALRQMTGGCRSGR
Trigger: CCTCCCGCTTCTGCAGCCGCCAGTCATTTGCCTTAGAGCAGCTCAAAGCCAAGCAACGCAAGGACCCTCGGTTCTGTGCCTTCGTGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS TCA 90 bp TGCTCTGCCGAAGGTGGGACAAGTCCAGGCGCCGCTGATAGTCCTTaGGCCTCTGGGGCAGAGACGGGAGCATTATGGGGACAAGCTAAG +
Preference number: 5 (lower is better)
Translates to: CSAEGGTSPGAADSP*ASGAETGALWGQAK
Trigger: CTTAGCTTGTCCCCATAATGCTCCCGTCTCTGCCCCAGAGGCTCAAGGACTATCAGCGGCGCCTGGACTTGTCCCACCTTCGGCAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS GCA 90 bp GGGGAAGATGTTCTGCAGCTCCTCCAAGGGGAAGAACAGGCATTCTaGCATGGGCTGGAAGAAGAGGTCGTGCAGCACCCGCAGCATGCG +
Preference number: 5 (lower is better)
Translates to: GEDVLQLLQGEEQAF*HGLEEEVVQHPQHA
Trigger: CGCATGCTGCGGGTGCTGCACGACCTCTTCTTCCAGCCCATGGCAGAATGCCTGTTCTTCCCCTTGGAGGAGCTGCAGAACATCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000594521.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp CCAGGAAGCTGTGGTAGAAGTCCAGGAAGGCCTTCTTGGCCTCCTTaGGGCCCAGTGAGCCCAGCATGTCGGCATGCAGACAGCAAAGCA +
Preference number: 5 (lower is better)
Translates to: PGSCGRSPGRPSWPP*GPVSPACRHADSKA
Trigger: TGCTTTGCTGTCTGCATGCCGACATGCTGGGCTCACTGGGCCCCAAGGAGGCCAAGAAGGCCTTCCTGGACTTCTACCACAGCTTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337665.8
ENST00000354532.8
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp CTGTCTTCTCCAGGAAGCTGTGGTAGAAGTCCAGGAAGGCCTTCTTaGCCTCCTTGGGGCCCAGTGAGCCCAGCATGTCGGCATGCAGAC +
Preference number: 5 (lower is better)
Translates to: LSSPGSCGRSPGRPS*PPWGPVSPACRHAD
Trigger: GTCTGCATGCCGACATGCTGGGCTCACTGGGCCCCAAGGAGGCCAAGAAGGCCTTCCTGGACTTCTACCACAGCTTCCTGGAGAAGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337665.8
ENST00000354532.8
ENST00000596957.1
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp CCAGGAAGCTGTGGTAGAAGTCCAGGAAGGCCTTCTTGGCCTCCTTaGGGCCCAGTGAGCCCAGCATGTCGGCATGCAGACAGCAAAGCT +
Preference number: 5 (lower is better)
Translates to: PGSCGRSPGRPSWPP*GPVSPACRHADSKA
Trigger: AGCTTTGCTGTCTGCATGCCGACATGCTGGGCTCACTGGGCCCCAAGGAGGCCAAGAAGGCCTTCCTGGACTTCTACCACAGCTTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596957.1
CDS-3UTR CAA 90 bp GAAGGTGGTGTGGGACTTGGCGGGGCGGAGCCTGACTGTATCCATATGTCCCTCCAGAACCGAGGGTCCTaGCGTTGCTTGGCTTTGAGC +
Preference number: 5 (lower is better)
Translates to: EGGVGLGGAEPDCIHMSLQNRGS*RCLALS
Trigger: GCTCAAAGCCAAGCAACGCAAGGACCCTCGGTTCTG...GAGGGACATATGGATACAGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS GCA 90 bp AGGGAATGCACCTCGATGAGCTCGTCCAGGCTGGGGAAGATGTTCTaGAGCTCCTCCAAGGGGAAGAACAGGCATTCTGCCATGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RECTSMSSSRLGKMF*SSSKGKNRHSAMGW
Trigger: CCAGCCCATGGCAGAATGCCTGTTCTTCCCCTTGGAGGAGCTGCAGAACATCTTCCCCAGCCTGGACGAGCTCATCGAGGTGCATTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 90 bp GACTGTATCCATATGTCCCTCTGTCCGTGTATCTCCTATCCAGGCTaGGTGTGTGCGGGTCCGTGTTCCAGTCCCGGTCCAGGCTTGCGT +
Preference number: 5 (lower is better)
Translates to: DCIHMSLCPCISYPG*VCAGPCSSPGPGLR
Trigger: ACGCAAGCCTGGACCGGGACTGGAACACGGACCCGCACACACGCAGCCTGGATAGGAGATACACGGACAGAGGGACATATGGATACAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594417.1
ENST00000595770.1
ENST00000599589.5
CDS GCA 90 bp AGGCTTTGGAGAGAAGAATTTGGTCCCCTAGAGTTCACGGAAAGGTaGTGCCACAGGCTGATGGGGGCGCTGCCACAGGCACAGAGTGGG +
Preference number: 5 (lower is better)
Translates to: RLWREEFGPLEFTER*CHRLMGALPQAQSG
Trigger: CCCACTCTGTGCCTGTGGCAGCGCCCCCATCAGCCTGTGGCAGCACCTTTCCGTGAACTCTAGGGGACCAAATTCTTCTCTCCAAAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 90 bp AGATGTTCTGCAGCTCCTCCAAGGGGAAGAACAGGCATTCTGCCATaGGCTGGAAGAAGAGGTCGTGCAGCACCCGCAGCATGCGCACGT +
Preference number: 5 (lower is better)
Translates to: RCSAAPPRGRTGILP*AGRRGRAAPAACAR
Trigger: ACGTGCGCATGCTGCGGGTGCTGCACGACCTCTTCTTCCAGCCCATGGCAGAATGCCTGTTCTTCCCCTTGGAGGAGCTGCAGAACATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000594521.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp TCTAAGGCAAATGACTGGCGGCTGCAGAAGCGGGAGGAGATTTTCTaGAACCAGGAGCCCTCAGCACCATCAAACCGGGCCAGCAGCACG +
Preference number: 5 (lower is better)
Translates to: SKANDWRLQKREEIF*NQEPSAPSNRASST
Trigger: CGTGCTGCTGGCCCGGTTTGATGGTGCTGAGGGCTCCTGGTTCCAGAAAATCTCCTCCCGCTTCTGCAGCCGCCAGTCATTTGCCTTAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS-3UTR CAA 90 bp CCGGAAGAAGTTCCTCCCCGACTTCTTGTCTCCACTCTTGGTCCGCACCCCAAGTTCCTCCCCGACTTCTaGTCTCCACTCTTGGTCCGC +
Preference number: 5 (lower is better)
Translates to: PEEVPPRLLVSTLGPHPKFLPDF*SPLLVR
Trigger: GCGGACCAAGAGTGGAGACAAGAAGTCGGGGAGGAA...CTTGGGGTGCGGACCAAGAGTGGAGACAAGAAGTCGGGGAGGAACTTCTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CAA 90 bp AAGGTGGCGCATGTACAGGCCAATGGCGTTGACCACGGCAGCACTCTTTTCTTCCTGCTCAGCCCCTTCTaGGTCTTGGCAGGCTCGTCC +
Preference number: 5 (lower is better)
Translates to: KVAHVQANGVDHGSTLFFLLSPF*VLAGSS
Trigger: GGACGAGCCTGCCAAGACCAAGAAGGGGCTGAGCAG...GAAGAAAAGAGTGCTGCCGTGGTCAACGCCATTGGCCTGTACATGCGCCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS-3UTR CAA 90 bp CCCAGAGAAGGTGGTGTGGGACTTGGCGGGGCGGAGCCTGACTGTATCCATATGGGGTCCTTGCGTTGCTaGGCTTTGAGCTGCTCTAAG +
Preference number: 5 (lower is better)
Translates to: PREGGVGLGGAEPDCIHMGSLRC*ALSCSK
Trigger: CTTAGAGCAGCTCAAAGCCAAGCAACGCAAGGACCC...CATATGGATACAGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTTCTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CAA 90 bp AGCCTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCATCCCTGTGGGACTTaGGCCAAGTTACTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: SLSAPRSQHLGAGGVGEIHPCGT*AKLLFL
Trigger: CAGGAAAAGTAACTTGGCCAAAGTCCCACAGGGATG...GATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CAA 90 bp CAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGAGTGTTTACTTGGTACTaGGTGCAGTACCAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: QHLGLSTWALVGLVRSDRVFTWY*VQYQLC
Trigger: GCACAGCTGGTACTGCACCAAGTACCAAGTAAACAC...TCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS GCA 90 bp CTCTCAGCTTCCTGCACGAAGGCACAGAACCGAGGGTCCTTGCGTTaGTTGGCTTTGAGCTGCTCTAAGGCAAATGACTGGCGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: LSASCTKAQNRGSLR*LALSCSKANDWRLQ
Trigger: CTGCAGCCGCCAGTCATTTGCCTTAGAGCAGCTCAAAGCCAAGCAACGCAAGGACCCTCGGTTCTGTGCCTTCGTGCAGGAAGCTGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 90 bp CTTTGGAGAGAAGAATTTGGTCCCCTAGAGTTCACGGAAAGGTGCTaGCACAGGCTGATGGGGGCGCTGCCACAGGCACAGAGTGGGATG +
Preference number: 5 (lower is better)
Translates to: LWREEFGPLEFTERC*HRLMGALPQAQSGM
Trigger: CATCCCACTCTGTGCCTGTGGCAGCGCCCCCATCAGCCTGTGGCAGCACCTTTCCGTGAACTCTAGGGGACCAAATTCTTCTCTCCAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 90 bp TCTCCCTCATCCCATCCTTCTCCTTACCAAGTTCAAAGGCGACGTTaGGAGGGACCGGCACCCGGAGAACCTGCTCAAGAGAGAGAATGG +
Preference number: 5 (lower is better)
Translates to: SPSSHPSPYQVQRRR*EGPAPGEPAQEREW
Trigger: CCATTCTCTCTCTTGAGCAGGTTCTCCGGGTGCCGGTCCCTCCCAACGTCGCCTTTGAACTTGGTAAGGAGAAGGATGGGATGAGGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596957.1
CDS-3UTR CAA 90 bp GAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAAGTCCCGGTCCAGGCTaGCGTGTCCAGCAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: EAASSQQMRVYLVLGAVPSPGPG*RVQQGS
Trigger: GGACCCCTGCTGGACACGCAAGCCTGGACCGGGACT...TGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CAA 90 bp CTCTCAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAAATGCGTGTTTACTaGGTACTTGGTGCAGTACCA +
Preference number: 5 (lower is better)
Translates to: LSAPRSQHLGAGGVGEIRQMRVY*VLGAVP
Trigger: TGGTACTGCACCAAGTACCAAGTAAACACGCATTTG...TCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CAA 90 bp GCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCAGTACCAGCTCTCGCGCCTGTCCGTTaGTCCGCGCGTCCACTGCAT +
Preference number: 5 (lower is better)
Translates to: AASSQQMRVYLVLGAVPALAPVR*SARPLH
Trigger: ATGCAGTGGACGCGCGGACAAACGGACAGGCGCGAG...AGCTGGTACTGCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594417.1
CDS TCA 90 bp CCTGGGCTGATGTCCACAATCTGGTGTTCTAGAAACCCCAAGGCTTaGATAGGGGACTCCCTTGCTCAGAGGGCCAGAGTCTCCGTGCAT +
Preference number: 5 (lower is better)
Translates to: PGLMSTIWCSRNPKA*IGDSLAQRARVSVH
Trigger: ATGCACGGAGACTCTGGCCCTCTGAGCAAGGGAGTCCCCTATTCAAGCCTTGGGGTTTCTAGAACACCAGATTGTGGACATCAGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 90 bp TCCACTGCCTTGTCCTTAGTCACCCGCCACGTCAGTGGGCCCTCGTaGACCAATTTCTTCTTGGTGATGTCCAGGTTCTTGAACTCGCTC +
Preference number: 5 (lower is better)
Translates to: STALSLVTRHVSGPS*TNFFLVMSRFLNSL
Trigger: GAGCGAGTTCAAGAACCTGGACATCACCAAGAAGAAATTGGTCCACGAGGGCCCACTGACGTGGCGGGTGACTAAGGACAAGGCAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp CACATGCACCTCCACTGCCTTGTCCTTAGTCACCCGCCACGTCAGTaGGCCCTCGTGGACCAATTTCTTCTTGGTGATGTCCAGGTTCTT +
Preference number: 5 (lower is better)
Translates to: HMHLHCLVLSHPPRQ*ALVDQFLLGDVQVL
Trigger: AAGAACCTGGACATCACCAAGAAGAAATTGGTCCACGAGGGCCCACTGACGTGGCGGGTGACTAAGGACAAGGCAGTGGAGGTGCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS-3UTR CAA 90 bp TTCTCGGCATCAACCTCTGCTTTGAGGTGTCGAAAATCTGGAACCTGGGGCTCTGGCTACCTGCTGGCTTaGCACCACCTCCTGCACGAA +
Preference number: 5 (lower is better)
Translates to: FSASTSALRCRKSGTWGSGYLLA*HHLLHE
Trigger: TTCGTGCAGGAGGTGGTGCAAAGCCAGCAGGTAGCC...AGAGCCCCAGGTTCCAGATTTTCGACACCTCAAAGCAGAGGTTGATGCCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS GCA 90 bp CTCAGTGATGAGAGCACACCAGTTTTTCCGCTCCGACACAGTCTGTaGCACCAGCTCGTATATCTGGGCCTCCTGGTCCCAGGTAAAAAG +
Preference number: 5 (lower is better)
Translates to: LSDESTPVFPLRHSL*HQLVYLGLLVPGKK
Trigger: CTTTTTACCTGGGACCAGGAGGCCCAGATATACGAGCTGGTGGCACAGACTGTGTCGGAGCGGAAAAACTGGTGTGCTCTCATCACTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 90 bp CTCCACCTCGCGCCTGCATTCAAGTCCAGGCTCACCTCATCCCTGTaGGACTTTGGCCAAGTTACTTTTCCTGTCAGAACCTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: LHLAPAFKSRLTSSL*DFGQVTFPVRTSVS
Trigger: GGAAACTGAGGTTCTGACAGGAAAAGTAACTTGGCCAAAGTCCCACAGGGATGAGGTGAGCCTGGACTTGAATGCAGGCGCGAGGTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS CCA 90 bp GTCCGCGCGTCCACTGCATTCAAGTCCAGGCTCACCTCATCCCTGTaGGACTTTGGCCAAGTTACTTTTCCTGTCAGAACCTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: VRASTAFKSRLTSSL*DFGQVTFPVRTSVS
Trigger: GGAAACTGAGGTTCTGACAGGAAAAGTAACTTGGCCAAAGTCCCACAGGGATGAGGTGAGCCTGGACTTGAATGCAGTGGACGCGCGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594417.1
CDS CCA 90 bp GACTGCGTGCTGGCATCTGCCAAAAAGGCTTTGGAGAGAAGAATTTaGTCCCCTAGAGTTCACGGAAAGGTGCTGCCACAGGCTGATGGG +
Preference number: 5 (lower is better)
Translates to: DCVLASAKKALERRI*SPRVHGKVLPQADG
Trigger: CCCATCAGCCTGTGGCAGCACCTTTCCGTGAACTCTAGGGGACCAAATTCTTCTCTCCAAAGCCTTTTTGGCAGATGCCAGCACGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS-3UTR CAA 90 bp CCCAGAGAAGGTGGTGTGGGACTTGGCGGGGCGGAGCCTGACTGTATCCATATGTGGACCAATTTCTTCTaGGTGATGTCCAGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: PREGGVGLGGAEPDCIHMWTNFF*VMSRFL
Trigger: CAAGAACCTGGACATCACCAAGAAGAAATTGGTCCA...CATATGGATACAGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTTCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS-3UTR CAA 90 bp CAGCACCTCGGTCTCAGCACCTGGGCGCTGGTGGGGTTGGTGAGATCCGACAGACATTATTGTCCCATTTaGCAGATGAGGAAACTTGAG +
Preference number: 5 (lower is better)
Translates to: QHLGLSTWALVGLVRSDRHYCPI*QMRKLE
Trigger: CTCAAGTTTCCTCATCTGCAAAATGGGACAATAATG...TCTGTCGGATCTCACCAACCCCACCAGCGCCCAGGTGCTGAGACCGAGGTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CAA 90 bp GCGGGAGTGAGGCTGAACCTTCTCTGTCAGGCAGGGCTGAAGTTCTCTTCTAGCGTGTTTACTTGGTACTaGGTGCAGTACCAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: AGVRLNLLCQAGLKFSSSVFTWY*VQYQLC
Trigger: GCACAGCTGGTACTGCACCAAGTACCAAGTAAACAC...GCTAGAAGAGAACTTCAGCCCTGCCTGACAGAGAAGGTTCAGCCTCACTCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CAA 90 bp GAAGGTGGTGTGGGACTTGGCGGGGCGGAGCCTGACTGTATCCATATGTCCCTCCAAATGCGTGTTTACTaGGTACTTGGTGCAGTACCA +
Preference number: 5 (lower is better)
Translates to: EGGVGLGGAEPDCIHMSLQMRVY*VLGAVP
Trigger: TGGTACTGCACCAAGTACCAAGTAAACACGCATTTG...GAGGGACATATGGATACAGTCAGGCTCCGCCCCGCCAAGTCCCACACCACCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS TCA 90 bp CCTCATCCGGAGGCTTCTGGATCCACAATTGTGTGGTCTGCCTTGTaGGCTGTGTGTGGTGGTTTTCTTGTTTCCAGATCAGGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: PHPEASGSTIVWSAL*AVCGGFLVSRSGPA
Trigger: AGCAGGCCCTGATCTGGAAACAAGAAAACCACCACACACAGCTCACAAGGCAGACCACACAATTGTGGATCCAGAAGCCTCCGGATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 90 bp TTTCTGGATGGCACGGTTGTCCATCCACATCTCCCAGGTATCTTCTaGCTCATCCGGAGGCTTCTGGATCCACAATTGTGTGGTCTGCCT +
Preference number: 5 (lower is better)
Translates to: FLDGTVVHPHLPGIF*LIRRLLDPQLCGLP
Trigger: AGGCAGACCACACAATTGTGGATCCAGAAGCCTCCGGATGAGGCAGAAGATACCTGGGAGATGTGGATGGACAACCGTGCCATCCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS-3UTR CAA 90 bp ATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCGCTTCACCTGGCTCTaGGGCAGGCTGTGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: IIRKQQAHSKCVFTWYLVRFTWL*GRLCRV
Trigger: CACCCTGCACAGCCTGCCCAAGAGCCAGGTGAAGCG...CACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS GCA 90 bp GAGCTGTGTGTGGTGGTTTTCTTGTTTCCAGATCAGGGCCTGCTGTaGTCCCTAGACCTGGGATGGCTAACAGCTTCTTTTTCCCAACCA +
Preference number: 5 (lower is better)
Translates to: ELCVVVFLFPDQGLL*SLDLGWLTASFSQP
Trigger: TGGTTGGGAAAAAGAAGCTGTTAGCCATCCCAGGTCTAGGGAGCACAGCAGGCCCTGATCTGGAAACAAGAAAACCACCACACACAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS-3UTR CAA 90 bp TTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCCCGAGGGTCCTTGCGTaGCTTGGCTTTGAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LFGSSKLTANACLLGTWCPRVLA*LGFELL
Trigger: GAGCAGCTCAAAGCCAAGCAACGCAAGGACCCTCGG...GCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS CCA 90 bp TTCTTGTTTCCAGATCAGGGCCTGCTGTGCTCCCTAGACCTGGGATaGCTAACAGCTTCTTTTTCCCAACCATCAACCGTGAATGACTGC +
Preference number: 5 (lower is better)
Translates to: FLFPDQGLLCSLDLG*LTASFSQPSTVNDC
Trigger: GCAGTCATTCACGGTTGATGGTTGGGAAAAAGAAGCTGTTAGCCATCCCAGGTCTAGGGAGCACAGCAGGCCCTGATCTGGAAACAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 90 bp CTAAATCACCTGCTGGGTTTTCTAGACTCTGCGGGTGTTTCTGGATaGCACGGTTGTCCATCCACATCTCCCAGGTATCTTCTGCCTCAT +
Preference number: 5 (lower is better)
Translates to: LNHLLGFLDSAGVSG*HGCPSTSPRYLLPH
Trigger: ATGAGGCAGAAGATACCTGGGAGATGTGGATGGACAACCGTGCCATCCAGAAACACCCGCAGAGTCTAGAAAACCCAGCAGGTGATTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 90 bp CTTTCTAAATCACCTGCTGGGTTTTCTAGACTCTGCGGGTGTTTCTaGATGGCACGGTTGTCCATCCACATCTCCCAGGTATCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: LSKSPAGFSRLCGCF*MARLSIHISQVSSA
Trigger: GGCAGAAGATACCTGGGAGATGTGGATGGACAACCGTGCCATCCAGAAACACCCGCAGAGTCTAGAAAACCCAGCAGGTGATTTAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS-3UTR CAA 90 bp CTGCGGTTTAACCTTCCCAACCACTCTAGGAGGGAGGTCATTATTGTCCCATTTGTGATGTCCAGGTTCTaGAACTCGCTCAGCATAGGG +
Preference number: 5 (lower is better)
Translates to: LRFNLPNHSRREVIIVPFVMSRF*NSLSIG
Trigger: CCCTATGCTGAGCGAGTTCAAGAACCTGGACATCAC...AAATGGGACAATAATGACCTCCCTCCTAGAGTGGTTGGGAAGGTTAAACCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS TCA 90 bp CCTGGGATGGCTAACAGCTTCTTTTTCCCAACCATCAACCGTGAATaGCTGCGTGCTGGCATCTGCCAAAAAGGCTTTGGAGAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: PGMANSFFFPTINRE*LRAGICQKGFGEKN
Trigger: ATTCTTCTCTCCAAAGCCTTTTTGGCAGATGCCAGCACGCAGTCATTCACGGTTGATGGTTGGGAAAAAGAAGCTGTTAGCCATCCCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS-3UTR CAA 90 bp GTTGACCACGGCAGCACTCTTTTCTTCGTCGGTAGAGATGGTATGTCTGTAGGAGCATCAACCTCTGCTTaGAGGTGTCGAAAATCTGGA +
Preference number: 5 (lower is better)
Translates to: VDHGSTLFFVGRDGMSVGASTSA*RCRKSG
Trigger: TCCAGATTTTCGACACCTCAAAGCAGAGGTTGATGC...TCCTACAGACATACCATCTCTACCGACGAAGAAAAGAGTGCTGCCGTGGTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598812.5
CDS GCA 90 bp GGATGGCTAACAGCTTCTTTTTCCCAACCATCAACCGTGAATGACTaGGTGCTGGCATCTGCCAAAAAGGCTTTGGAGAGAAGAATTTGG +
Preference number: 5 (lower is better)
Translates to: GWLTASFSQPSTVND*VLASAKKALERRIW
Trigger: CCAAATTCTTCTCTCCAAAGCCTTTTTGGCAGATGCCAGCACGCAGTCATTCACGGTTGATGGTTGGGAAAAAGAAGCTGTTAGCCATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS-3UTR CAA 90 bp ATTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCATCCCTGTGGGACTTaGGCCAAGTTACTTTTCCTG +
Preference number: 5 (lower is better)
Translates to: IIRKQQAHSKCVFTWYLVHPCGT*AKLLFL
Trigger: CAGGAAAAGTAACTTGGCCAAAGTCCCACAGGGATG...CACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS-3UTR CAA 90 bp TTATTCGGAAGCAGCAAGCTCACAGCAAATGCGTGTTTACTTGGTACTTGGTGCGGAGGGAGGTCATTATaGTCCCATTTTGCAGATGAG +
Preference number: 5 (lower is better)
Translates to: LFGSSKLTANACLLGTWCGGRSL*SHFADE
Trigger: CTCATCTGCAAAATGGGACAATAATGACCTCCCTCC...GCACCAAGTACCAAGTAAACACGCATTTGCTGTGAGCTTGCTGCTTCCGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS TCA 90 bp TGCAATTTCCTAATTTTCTGCATATCTGATGGTTTGGCGTCCGGATaGCCAGCCTCTGGTCTTGCAGCTGACATGTTCTTCTTTCTGCAT +
Preference number: 5 (lower is better)
Translates to: CNFLIFCISDGLASG*PASGLAADMFFFLH
Trigger: ATGCAGAAAGAAGAACATGTCAGCTGCAAGACCAGAGGCTGGTCATCCGGACGCCAAACCATCAGATATGCAGAAAATTAGGAAATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS-3UTR CAA 90 bp CTGCGGTTTAACCTTCCCAACCACTCTAGGAGGGAGGTCATTATTGTCCCATTTCATTATTGTCCCATTTaGCAGATGAGGAAACTTGAG +
Preference number: 5 (lower is better)
Translates to: LRFNLPNHSRREVIIVPFHYCPI*QMRKLE
Trigger: CTCAAGTTTCCTCATCTGCAAAATGGGACAATAATG...AAATGGGACAATAATGACCTCCCTCCTAGAGTGGTTGGGAAGGTTAAACCGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS CCA 72 bp CTCGTCGGGCAGGGCCAAGCACTGCCGTGGCGGAACTaGGGTCCATGTCCACGTCGCTCCGGGAGCGGCCCC +
Preference number: 6 (lower is better)
Translates to: LVGQGQALPWRN*GPCPRRSGSGP
Trigger: GGGGCCGCTCCCGGAGCGACGTGGACATGGACCCCAGTTCCGCCACGGCAGTGCTTGGCCCTGCCCGACGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000594258.1
ENST00000594521.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
CDS CCA 72 bp CGGGGGTGGCTCGTCGGGCAGGGCCAAGCACTGCCGTaGCGGAACTGGGGTCCATGTCCACGTCGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: RGWLVGQGQALP*RNWGPCPRRSG
Trigger: CCCGGAGCGACGTGGACATGGACCCCAGTTCCGCCACGGCAGTGCTTGGCCCTGCCCGACGAGCCACCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594258.1
ENST00000594521.5
ENST00000599589.5
ENST00000599846.5
CDS CCA 72 bp GGGAGGCCGCCCCTCGGGCGAAGTCTTCCATCTCCCTaGGCTCTGCAGGGCTGGTGTCCGCGCGGAGGTGAC +
Preference number: 6 (lower is better)
Translates to: GRPPLGRSLPSP*ALQGWCPRGGD
Trigger: GTCACCTCCGCGCGGACACCAGCCCTGCAGAGCCCAGGGAGATGGAAGACTTCGCCCGAGGGGCGGCCTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000347545.8
ENST00000354532.8
ENST00000599846.5
ENST00000600274.5
ENST00000600387.5
CDS TCA 72 bp CACCAGCGGTGGCCACCTCGCGGGTCATGGCGGAGGTaGGCCGCAGCACGGGCCGCAGCATGGTCTTGCCAT +
Preference number: 6 (lower is better)
Translates to: HQRWPPRGSWRR*AAARAAAWSCH
Trigger: ATGGCAAGACCATGCTGCGGCCCGTGCTGCGGCTCACCTCCGCCATGACCCGCGAGGTGGCCACCGCTGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600517.1
CDS GCA 72 bp AGGCTCGGGGGTGGCTCGTCGGGCAGGGCCAAGCACTaGCGTGGCGGAACTGGGGTCCATGTCCACGTCGCT +
Preference number: 6 (lower is better)
Translates to: RLGGGSSGRAKH*RGGTGVHVHVA
Trigger: AGCGACGTGGACATGGACCCCAGTTCCGCCACGGCAGTGCTTGGCCCTGCCCGACGAGCCACCCCCGAGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000594258.1
ENST00000594521.5
ENST00000599589.5
ENST00000599846.5
CDS CAA 72 bp GCGGAGGTGAGCCGCAGCACGGGCCGCAGCATGGTCTaGCCATCGGGCGTGGGCGTCAGTGTCCGGCTATGG +
Preference number: 6 (lower is better)
Translates to: AEVSRSTGRSMV*PSGVGVSVRLW
Trigger: CCATAGCCGGACACTGACGCCCACGCCCGATGGCAAGACCATGCTGCGGCCCGTGCTGCGGCTCACCTCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
ENST00000600517.1
CDS CAA 90 bp CGGGTCATGGCGGAGGTGAGCCGCAGCACGGGCCGCAGCATGGTCTaGCCATCGGGCGTGGGCGTCAGTGTCCGGCTATGGGACTTGAGC +
Preference number: 6 (lower is better)
Translates to: RVMAEVSRSTGRSMV*PSGVGVSVRLWDLS
Trigger: GCTCAAGTCCCATAGCCGGACACTGACGCCCACGCCCGATGGCAAGACCATGCTGCGGCCCGTGCTGCGGCTCACCTCCGCCATGACCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
ENST00000600517.1
CDS CAA 90 bp CCAGGCTGCGTGTGTGCGGGTCCGTGTTCCAGTCCCGGTCCAGGCTaGCGTGTCCAGCAGGGGTCCTGGACGCATCGTCGCCACCTCCAC +
Preference number: 6 (lower is better)
Translates to: PGCVCAGPCSSPGPG*RVQQGSWTHRRHLH
Trigger: GTGGAGGTGGCGACGATGCGTCCAGGACCCCTGCTGGACACGCAAGCCTGGACCGGGACTGGAACACGGACCCGCACACACGCAGCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594417.1
ENST00000595770.1
ENST00000599589.5
CDS CCA 72 bp CGGAAGTCCTCCAGCTGCCGGCCCACGGCTACCTGCTaGCTTTGCACCACCTCCTGCACGAACCGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: RKSSSCRPTATC*LCTTSCTNRRW
Trigger: CCAGCGGCGGTTCGTGCAGGAGGTGGTGCAAAGCCAGCAGGTAGCCGTGGGCCGGCAGCTGGAGGACTTCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000598812.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 72 bp AGTCCCGGTCCAGGCTTGCGTGTCCAGCAGGGGTCCTaGACGCATCGTCGCCACCTCCACCTCGCGCCTGCA +
Preference number: 6 (lower is better)
Translates to: SPGPGLRVQQGS*THRRHLHLAPA
Trigger: TGCAGGCGCGAGGTGGAGGTGGCGACGATGCGTCCAGGACCCCTGCTGGACACGCAAGCCTGGACCGGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS CCA 72 bp AGTCCCGGTCCAGGCTTGCGTGTCCAGCAGGGGTCCTaGACGCATCGTCGCCACCTCCACCTCGCGCCTGTC +
Preference number: 6 (lower is better)
Translates to: SPGPGLRVQQGS*THRRHLHLAPV
Trigger: GACAGGCGCGAGGTGGAGGTGGCGACGATGCGTCCAGGACCCCTGCTGGACACGCAAGCCTGGACCGGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000595770.1
CDS CCA 72 bp CATACGTGGCTCGTCGGGCAGGGCCAAGCACTGCCGTaGCGGAACTGGGGTCCATGTCCACGTCGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: HTWLVGQGQALP*RNWGPCPRRSG
Trigger: CCCGGAGCGACGTGGACATGGACCCCAGTTCCGCCACGGCAGTGCTTGGCCCTGCCCGACGAGCCACGTATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS CAA 72 bp CCATCGGGCGTGGGCGTCAGTGTCCGGCTATGGGACTaGAGCAGCAGCCGCTCGTCCTGGCGCTGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: PSGVGVSVRLWD*SSSRSSWRWSS
Trigger: GCTGCTCCAGCGCCAGGACGAGCGGCTGCTGCTCAAGTCCCATAGCCGGACACTGACGCCCACGCCCGATGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
ENST00000600517.1
CDS TCA 72 bp CATCGGGCGTGGGCGTCAGTGTCCGGCTATGGGACTTaGGCAGCAGCCGCTCGTCCTGGCGCTGGAGCAGCA +
Preference number: 6 (lower is better)
Translates to: HRAWASVSGYGT*AAAARPGAGAA
Trigger: TGCTGCTCCAGCGCCAGGACGAGCGGCTGCTGCTCAAGTCCCATAGCCGGACACTGACGCCCACGCCCGATG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
ENST00000600517.1
CDS TCA 72 bp TGTGATCGGTGGCCACCTCGCGGGTCATGGCGGAGGTaGGCCGCAGCACGGGCCGCAGCATGGTCTTGCCAT +
Preference number: 6 (lower is better)
Translates to: CDRWPPRGSWRR*AAARAAAWSCH
Trigger: ATGGCAAGACCATGCTGCGGCCCGTGCTGCGGCTCACCTCCGCCATGACCCGCGAGGTGGCCACCGATCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 72 bp TCCTCCAGCTGCCGGCCCACGGCTACCTGCTGGCTTTaGACCACCTCCTGCACGAACCGCCGCTGGACATCC +
Preference number: 6 (lower is better)
Translates to: SSSCRPTATCWL*TTSCTNRRWTS
Trigger: GGATGTCCAGCGGCGGTTCGTGCAGGAGGTGGTGCAAAGCCAGCAGGTAGCCGTGGGCCGGCAGCTGGAGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000599846.5
ENST00000600274.5
CDS GCA 72 bp GAACGGAAGTCCTCCAGCTGCCGGCCCACGGCTACCTaGTGGCTTTGCACCACCTCCTGCACGAACCGCCGC +
Preference number: 6 (lower is better)
Translates to: ERKSSSCRPTAT*WLCTTSCTNRR
Trigger: GCGGCGGTTCGTGCAGGAGGTGGTGCAAAGCCAGCAGGTAGCCGTGGGCCGGCAGCTGGAGGACTTCCGTTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000598812.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 72 bp ACCGGCACCCGGAGAACCAGGGGTCCTGGCTCAAACTaGAGGGCCACGTGCTGCAGGAGGGCCATGAGGTGG +
Preference number: 6 (lower is better)
Translates to: TGTRRTRGPGSN*RATCCRRAMRW
Trigger: CCACCTCATGGCCCTCCTGCAGCACGTGGCCCTGCAGTTTGAGCCAGGACCCCTGGTTCTCCGGGTGCCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347545.8
ENST00000378152.8
CDS GCA 72 bp TGTGTGCGGGTCCGTGTTCCAGTCCCGGTCCAGGCTTaGGTGTCCAGCAGGGGTCCTGGACGCATCGTCGCC +
Preference number: 6 (lower is better)
Translates to: CVRVRVPVPVQA*VSSRGPGRIVA
Trigger: GGCGACGATGCGTCCAGGACCCCTGCTGGACACGCAAGCCTGGACCGGGACTGGAACACGGACCCGCACACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594417.1
ENST00000595770.1
ENST00000599589.5
CDS CAA 72 bp GTCCTCCAGCTGCCGGCCCACGGCTACCTGCTGGCTTaGCACCACCTCCTGCACGAACCGCCGCTGGACATC +
Preference number: 6 (lower is better)
Translates to: VLQLPAHGYLLA*HHLLHEPPLDI
Trigger: GATGTCCAGCGGCGGTTCGTGCAGGAGGTGGTGCAAAGCCAGCAGGTAGCCGTGGGCCGGCAGCTGGAGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000599846.5
ENST00000600274.5
CDS TCA 72 bp CCAGGCTGCTGGACTCTCTGTGGCTCCGCGGGGTCCTaGCGTGTGTACCCTGCCCGCTGCGCACTGAGATCT +
Preference number: 6 (lower is better)
Translates to: PGCWTLCGSAGS*RVYPARCALRS
Trigger: AGATCTCAGTGCGCAGCGGGCAGGGTACACACGTCAGGACCCCGCGGAGCCACAGAGAGTCCAGCAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 72 bp CGGCCCACGGCTACCTGCTGGCTTTGCACCACCTCCTaGACGAACCGCCGCTGGACATCCTCGGAGATGAGG +
Preference number: 6 (lower is better)
Translates to: RPTATCWLCTTS*TNRRWTSSEMR
Trigger: CCTCATCTCCGAGGATGTCCAGCGGCGGTTCGTGCAGGAGGTGGTGCAAAGCCAGCAGGTAGCCGTGGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000599846.5
ENST00000600274.5
CDS GCA 72 bp GCCTCCTTGGGGCCCAGTGAGCCCAGCATGTCGGCATaGAGACAGCAAAGCTGGTGTCCGCGCGGAGGTGAC +
Preference number: 6 (lower is better)
Translates to: ASLGPSEPSMSA*RQQSWCPRGGD
Trigger: GTCACCTCCGCGCGGACACCAGCTTTGCTGTCTGCATGCCGACATGCTGGGCTCACTGGGCCCCAAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596957.1
CDS GCA 72 bp GAGCGTTCAACCCCGGTCAGTGGCCTTGGCATTCGATaGCCGCAGGGTGGCCCGTGCAGCAGACCAGGTCTC +
Preference number: 6 (lower is better)
Translates to: ERSTPVSGLGIR*PQGGPCSRPGL
Trigger: GAGACCTGGTCTGCTGCACGGGCCACCCTGCGGGCATCGAATGCCAAGGCCACTGACCGGGGTTGAACGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS CCA 72 bp GGGAGGCCGCCCCTCGGGCGAAGTCTTCCATCTCCCTaGGCTCTGCAGGGCTGCTCCAGGTGGAAAGAGAAG +
Preference number: 6 (lower is better)
Translates to: GRPPLGRSLPSP*ALQGCSRWKEK
Trigger: CTTCTCTTTCCACCTGGAGCAGCCCTGCAGAGCCCAGGGAGATGGAAGACTTCGCCCGAGGGGCGGCCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337665.8
ENST00000378152.8
CDS CCA 72 bp GAAGCTGCTTCAGGGACAGCACTTTCCGAAGGGCCGTaGCAGCGAGCTGGCCCTCGGGGCCTGGTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: EAASGTALSEGP*QRAGPRGLVCR
Trigger: TCTGCAGACCAGGCCCCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAGTGCTGTCCCTGAAGCAGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000595723.5
ENST00000595897.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 72 bp GCAGGCTCTCTGAGCGCCCCAGACGCCCTGATAGCCTaGACCCCGAGGCCAAGGACAGAGTCAGGCAGATGC +
Preference number: 6 (lower is better)
Translates to: AGSLSAPDALIA*TPRPRTESGRC
Trigger: GCATCTGCCTGACTCTGTCCTTGGCCTCGGGGTCCAGGCTATCAGGGCGTCTGGGGCGCTCAGAGAGCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000594258.1
ENST00000595897.5
CDS CCA 72 bp CCCGGTCAGTGGCCTTGGCATTCGATGCCCGCAGGGTaGCCCGTGCAGCAGACCAGGTCTCTAGATCGGACC +
Preference number: 6 (lower is better)
Translates to: PGQWPWHSMPAG*PVQQTRSLDRT
Trigger: GGTCCGATCTAGAGACCTGGTCTGCTGCACGGGCCACCCTGCGGGCATCGAATGCCAAGGCCACTGACCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS CAA 90 bp GGAACGGAAGTCCTCCAGCTGCCGGCCCACGGCTACCTGCTGGCTTaGCACCACCTCCTGCACGAACCGCCGCTGGACATCCTCGGAGAT +
Preference number: 6 (lower is better)
Translates to: GTEVLQLPAHGYLLA*HHLLHEPPLDILGD
Trigger: ATCTCCGAGGATGTCCAGCGGCGGTTCGTGCAGGAGGTGGTGCAAAGCCAGCAGGTAGCCGTGGGCCGGCAGCTGGAGGACTTCCGTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000599846.5
ENST00000600274.5
CDS CAA 90 bp GGGTCCTGGACGCATCGTCGCCACCTCCACCTCGCGCCTGTCCGTTaGTCCGCGCGTCCACTGCATTCAAGTCCAGGCTCACCTCATCCC +
Preference number: 6 (lower is better)
Translates to: GSWTHRRHLHLAPVR*SARPLHSSPGSPHP
Trigger: GGGATGAGGTGAGCCTGGACTTGAATGCAGTGGACGCGCGGACAAACGGACAGGCGCGAGGTGGAGGTGGCGACGATGCGTCCAGGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594417.1
CDS GCA 72 bp ATGCCCATGAGCCGCTTGGAACGGAAGTCCTCCAGCTaGCGGCCCACGGCTACCTGCTGGCTTTGCACCACC +
Preference number: 6 (lower is better)
Translates to: MPMSRLERKSSS*RPTATCWLCTT
Trigger: GGTGGTGCAAAGCCAGCAGGTAGCCGTGGGCCGGCAGCTGGAGGACTTCCGTTCCAAGCGGCTCATGGGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000598812.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 72 bp TCTCTGTGGCTCCGCGGGGTCCTGACGTGTGTACCCTaGCCGCTGCGCACTGAGATCTACCCTGGGCACTTG +
Preference number: 6 (lower is better)
Translates to: SLWLRGVLTCVP*PLRTEIYPGHL
Trigger: CAAGTGCCCAGGGTAGATCTCAGTGCGCAGCGGGCAGGGTACACACGTCAGGACCCCGCGGAGCCACAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 72 bp GTGCCCTGGCTGTCCCCAGGCTGTCCTCCTATCCTGTaGTGGGCTGGACGGGGTCTTCTTGGGATGAGACCC +
Preference number: 6 (lower is better)
Translates to: VPWLSPGCPPIL*WAGRGLLGMRP
Trigger: GGGTCTCATCCCAAGAAGACCCCGTCCAGCCCAGCACAGGATAGGAGGACAGCCTGGGGACAGCCAGGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 72 bp GTTGACATACGTGGCTCGTCGGGCAGGGCCAAGCACTaGCGTGGCGGAACTGGGGTCCATGTCCACGTCGCT +
Preference number: 6 (lower is better)
Translates to: VDIRGSSGRAKH*RGGTGVHVHVA
Trigger: AGCGACGTGGACATGGACCCCAGTTCCGCCACGGCAGTGCTTGGCCCTGCCCGACGAGCCACGTATGTCAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS CCA 72 bp AAGAAGAGGTCGTGCAGCACCCGCAGCATGCGCACGTaGGCCGCCTCTGTCACCAGCAGCTCGCTGATGACC +
Preference number: 6 (lower is better)
Translates to: KKRSCSTRSMRT*AASVTSSSLMT
Trigger: GGTCATCAGCGAGCTGCTGGTGACAGAGGCGGCCCACGTGCGCATGCTGCGGGTGCTGCACGACCTCTTCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594258.1
ENST00000594521.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 72 bp CTATGGGACTTGAGCAGCAGCCGCTCGTCCTGGCGCTaGAGCAGCAGCAGCAGGTCGTCCAGCAGCAGCACA +
Preference number: 6 (lower is better)
Translates to: LWDLSSSRSSWR*SSSSRSSSSST
Trigger: TGTGCTGCTGCTGGACGACCTGCTGCTGCTGCTCCAGCGCCAGGACGAGCGGCTGCTGCTCAAGTCCCATAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
ENST00000600517.1
CDS CCA 72 bp TGGGATGTGGTTTCTGCCAGGCTGCTGGACTCTCTGTaGCTCCGCGGGGTCCTGACGTGTGTACCCTGCCCG +
Preference number: 6 (lower is better)
Translates to: WDVVSARLLDSL*LRGVLTCVPCP
Trigger: CGGGCAGGGTACACACGTCAGGACCCCGCGGAGCCACAGAGAGTCCAGCAGCCTGGCAGAAACCACATCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 72 bp CAGCCTCTTAGAGCGTTCAACCCCGGTCAGTGGCCTTaGCATTCGATGCCCGCAGGGTGGCCCGTGCAGCAG +
Preference number: 6 (lower is better)
Translates to: QPLRAFNPGQWP*HSMPAGWPVQQ
Trigger: CTGCTGCACGGGCCACCCTGCGGGCATCGAATGCCAAGGCCACTGACCGGGGTTGAACGCTCTAAGAGGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS GCA 72 bp GCCTCCTTGGGGCCCAGTGAGCCCAGCATGTCGGCATaGAGACAGCAAAGCAGGGGTCCTGGCTCAAACTGC +
Preference number: 6 (lower is better)
Translates to: ASLGPSEPSMSA*RQQSRGPGSNC
Trigger: GCAGTTTGAGCCAGGACCCCTGCTTTGCTGTCTGCATGCCGACATGCTGGGCTCACTGGGCCCCAAGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337665.8
ENST00000354532.8
ENST00000599846.5
ENST00000600274.5
CDS GCA 72 bp GTCCTGGACGCATCGTCGCCACCTCCACCTCGCGCCTaGATTCAAGTCCAGGCTCACCTCATCCCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: VLDASSPPPPRA*IQVQAHLIPVG
Trigger: TCCCACAGGGATGAGGTGAGCCTGGACTTGAATGCAGGCGCGAGGTGGAGGTGGCGACGATGCGTCCAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS GCA 72 bp CCTCTGTCCGTGTATCTCCTATCCAGGCTGCGTGTGTaGGGGTCCGTGTTCCAGTCCCGGTCCAGGCTTGCG +
Preference number: 6 (lower is better)
Translates to: PLSVYLLSRLRV*GSVFQSRSRLA
Trigger: CGCAAGCCTGGACCGGGACTGGAACACGGACCCGCACACACGCAGCCTGGATAGGAGATACACGGACAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000594417.1
ENST00000595770.1
ENST00000599589.5
CDS CCA 72 bp TGCTGGCTTTGCACCACCTCCTGCACGAACCGCCGCTaGACATCCTCGGAGATGAGGTCAGCCCTAGTGCGG +
Preference number: 6 (lower is better)
Translates to: CWLCTTSCTNRR*TSSEMRSALVR
Trigger: CCGCACTAGGGCTGACCTCATCTCCGAGGATGTCCAGCGGCGGTTCGTGCAGGAGGTGGTGCAAAGCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000599846.5
ENST00000600274.5
CDS CCA 72 bp GCAAAATTCCTCCTCCAACTCCTTTCCGAAGGGCCGTaGCAGCGAGCTGGCCCTCGGGGCCTGGTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: AKFLLQLLSEGP*QRAGPRGLVCR
Trigger: TCTGCAGACCAGGCCCCGAGGGCCAGCTCGCTGCCACGGCCCTTCGGAAAGGAGTTGGAGGAGGAATTTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378152.8
ENST00000599589.5
CDS CCA 72 bp CCCTGGCTGTCCCCAGGCTGTCCTCCTATCCTGTGCTaGGCTGGACGGGGTCTTCTTGGGATGAGACCCTTG +
Preference number: 6 (lower is better)
Translates to: PWLSPGCPPILC*AGRGLLGMRPL
Trigger: CAAGGGTCTCATCCCAAGAAGACCCCGTCCAGCCCAGCACAGGATAGGAGGACAGCCTGGGGACAGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 72 bp AGCCTTCAGCCTCTTAGAGCGTTCAACCCCGGTCAGTaGCCTTGGCATTCGATGCCCGCAGGGTGGCCCGTG +
Preference number: 6 (lower is better)
Translates to: SLQPLRAFNPGQ*PWHSMPAGWPV
Trigger: CACGGGCCACCCTGCGGGCATCGAATGCCAAGGCCACTGACCGGGGTTGAACGCTCTAAGAGGCTGAAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS CAA 72 bp AGGTCAGCCCTAGTGCGGTCAAGTTCAAAGGCGACGTaGGGAGGGACCGGCACCCGGAGAACCAGGGGTCCT +
Preference number: 6 (lower is better)
Translates to: RSALVRSSSKAT*GGTGTRRTRGP
Trigger: AGGACCCCTGGTTCTCCGGGTGCCGGTCCCTCCCAACGTCGCCTTTGAACTTGACCGCACTAGGGCTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000347545.8
ENST00000378152.8
CDS CAA 72 bp ACGCATCGTCGCCACCTCCACCTCGCGCCTGTCCGTTaGTCCGCGCGTCCACTGCATTCAAGTCCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: THRRHLHLAPVR*SARPLHSSPGS
Trigger: TGAGCCTGGACTTGAATGCAGTGGACGCGCGGACAAACGGACAGGCGCGAGGTGGAGGTGGCGACGATGCGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594417.1
CDS CAA 90 bp ATTCTCTCGGTCCGGGCATCAGCTGGAGACGTCTCTCGGCCACCATaGCCGTTCTCAGAGCTGCTGAGGAGGGGTTCTCGGGTGCTGAGG +
Preference number: 6 (lower is better)
Translates to: ILSVRASAGDVSRPP*PFSELLRRGSRVLR
Trigger: CCTCAGCACCCGAGAACCCCTCCTCAGCAGCTCTGAGAACGGCAATGGTGGCCGAGAGACGTCTCCAGCTGATGCCCGGACCGAGAGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000595897.5
ENST00000598587.1
CDS TCA 72 bp GTCCAGGAAGGCCTTCTTGGCCTCCTTGGGGCCCAGTaGGCCCAGCATGTCGGCATGCAGACAGCAAAGCAG +
Preference number: 6 (lower is better)
Translates to: VQEGLLGLLGAQ*AQHVGMQTAKQ
Trigger: CTGCTTTGCTGTCTGCATGCCGACATGCTGGGCTCACTGGGCCCCAAGGAGGCCAAGAAGGCCTTCCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337665.8
ENST00000354532.8
ENST00000599846.5
ENST00000600274.5
CDS TCA 72 bp CAAACCGGGCCAGCAGCACGTCTCCGATCTCCTCGATaGGGTAGCCACTCTCCTGCCTCCGCTTCATCAGGC +
Preference number: 6 (lower is better)
Translates to: QTGPAARLRSPR*GSHSPASASSG
Trigger: GCCTGATGAAGCGGAGGCAGGAGAGTGGCTACCTCATCGAGGAGATCGGAGACGTGCTGCTGGCCCGGTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS TCA 72 bp GTCCAGGAAGGCCTTCTTGGCCTCCTTGGGGCCCAGTaGGCCCAGCATGTCGGCATGCAGACAGCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: VQEGLLGLLGAQ*AQHVGMQTAKL
Trigger: CAGCTTTGCTGTCTGCATGCCGACATGCTGGGCTCACTGGGCCCCAAGGAGGCCAAGAAGGCCTTCCTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000596957.1
CDS TCA 72 bp CGGGGTCCTGACGTGTGTACCCTGCCCGCTGCGCACTaGGATCTACCCTGGGCACTTGTAAGCCTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: RGPDVCTLPAAH*DLPWALVSLLR
Trigger: CCTCAACAGGCTTACAAGTGCCCAGGGTAGATCTCAGTGCGCAGCGGGCAGGGTACACACGTCAGGACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 72 bp TGGAGCAGCAGCAGCAGGTCGTCCAGCAGCAGCACATaGACCTCCACTGCCTTGTCCTTAGTCACCCGCCAC +
Preference number: 6 (lower is better)
Translates to: WSSSSRSSSSST*TSTALSLVTRH
Trigger: GTGGCGGGTGACTAAGGACAAGGCAGTGGAGGTGCATGTGCTGCTGCTGGACGACCTGCTGCTGCTGCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 72 bp CCCGCCCCATTGTCTTCCTCCGCCGGAAACAGAAGCTaGTTCAGGGACAGCACTTTCCGAAGGGCCGTGGCA +
Preference number: 6 (lower is better)
Translates to: PAPLSSSAGNRS*FRDSTFRRAVA
Trigger: TGCCACGGCCCTTCGGAAAGTGCTGTCCCTGAAGCAGCTTCTGTTTCCGGCGGAGGAAGACAATGGGGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000595723.5
ENST00000595897.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 72 bp TCCACCTCGCGCCTGTCCGTTTGTCCGCGCGTCCACTaGATTCAAGTCCAGGCTCACCTCATCCCTGTGGGA +
Preference number: 6 (lower is better)
Translates to: STSRLSVCPRVH*IQVQAHLIPVG
Trigger: TCCCACAGGGATGAGGTGAGCCTGGACTTGAATGCAGTGGACGCGCGGACAAACGGACAGGCGCGAGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594417.1
CDS CCA 72 bp AAGAAGAGGTCGTGCAGCACCCGCAGCATGCGCACGTaGGCCGCCTCTGTCACCAGCAGCTCTGTAGTTCCA +
Preference number: 6 (lower is better)
Translates to: KKRSCSTRSMRT*AASVTSSSVVP
Trigger: TGGAACTACAGAGCTGCTGGTGACAGAGGCGGCCCACGTGCGCATGCTGCGGGTGCTGCACGACCTCTTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000594044.1
CDS CAA 72 bp AGGTCAGCCCTAGTGCGGTCAAGTTCAAAGGCGACGTaGGGAGGGACCGGCACCCGGAGAACCGCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: RSALVRSSSKAT*GGTGTRRTAVF
Trigger: GAAGACAGCGGTTCTCCGGGTGCCGGTCCCTCCCAACGTCGCCTTTGAACTTGACCGCACTAGGGCTGACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337665.8
ENST00000354532.8
ENST00000599846.5
CDS TCA 72 bp GAAGGTGGGACAAGTCCAGGCGCCGCTGATAGTCCTTaGGCCTCTGGGGCAGAGACGGGAGCATTATGGGGA +
Preference number: 6 (lower is better)
Translates to: EGGTSPGAADSP*ASGAETGALWG
Trigger: TCCCCATAATGCTCCCGTCTCTGCCCCAGAGGCTCAAGGACTATCAGCGGCGCCTGGACTTGTCCCACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS CCA 72 bp TCCTCCAAGGGGAAGAACAGGCATTCTGCCATGGGCTaGAAGAAGAGGTCGTGCAGCACCCGCAGCATGCGC +
Preference number: 6 (lower is better)
Translates to: SSKGKNRHSAMG*KKRSCSTRSMR
Trigger: GCGCATGCTGCGGGTGCTGCACGACCTCTTCTTCCAGCCCATGGCAGAATGCCTGTTCTTCCCCTTGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000594521.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 72 bp GCAGCTCCTCCAAGGGGAAGAACAGGCATTCTGCCATaGGCTGGAAGAAGAGGTCGTGCAGCACCCGCAGCA +
Preference number: 6 (lower is better)
Translates to: AAPPRGRTGILP*AGRRGRAAPAA
Trigger: TGCTGCGGGTGCTGCACGACCTCTTCTTCCAGCCCATGGCAGAATGCCTGTTCTTCCCCTTGGAGGAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000594521.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 72 bp GGGCTGACCAGCAGGTCCTCCATGTCACGCACGGCTTaGTTGACGTGGTGTAGAATTTCCCGGCAGCACTCG +
Preference number: 6 (lower is better)
Translates to: GLTSRSSMSRTA*LTWCRISRQHS
Trigger: CGAGTGCTGCCGGGAAATTCTACACCACGTCAACCAAGCCGTGCGTGACATGGAGGACCTGCTGGTCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595897.5
CDS CAA 72 bp AGGTCAGCCCTAGTGCGGTCAAGTTCAAAGGCGACGTaGGGAGGGACCGGCACCCGGAGAACCTGCTCAAGA +
Preference number: 6 (lower is better)
Translates to: RSALVRSSSKAT*GGTGTRRTCSR
Trigger: TCTTGAGCAGGTTCTCCGGGTGCCGGTCCCTCCCAACGTCGCCTTTGAACTTGACCGCACTAGGGCTGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600274.5
CDS TCA 72 bp GCAGGCCCAAACAGGGATTGCAGGGTTGGGGCAGCTTaGAGGTCTCTCACCGCTGTCTTCTCCAGGAAGCTG +
Preference number: 6 (lower is better)
Translates to: AGPNRDCRVGAA*RSLTAVFSRKL
Trigger: CAGCTTCCTGGAGAAGACAGCGGTGAGAGACCTTCAAGCTGCCCCAACCCTGCAATCCCTGTTTGGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000596957.1
ENST00000600274.5
CDS TCA 72 bp CCACACGTCCTGAGGCCGCTGCCAAGAAGGAATGAATaGATCTCGGCTGTCCGAGCAGAGCATGGGAGTGCG +
Preference number: 6 (lower is better)
Translates to: PHVLRPLPRRNE*ISAVRAEHGSA
Trigger: CGCACTCCCATGCTCTGCTCGGACAGCCGAGATTCATTCATTCCTTCTTGGCAGCGGCCTCAGGACGTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596957.1
CDS TCA 72 bp ACGTCTCTCGGCCACCATTGCCGTTCTCAGAGCTGCTaGGGAGGGGTTCTCGGGTGTTTTTCCGCTCCGACA +
Preference number: 6 (lower is better)
Translates to: TSLGHHCRSQSC*GGVLGCFSAPT
Trigger: TGTCGGAGCGGAAAAACACCCGAGAACCCCTCCTCAGCAGCTCTGAGAACGGCAATGGTGGCCGAGAGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595723.5
CDS GCA 72 bp GTTCTGCAGCTCCTCCAAGGGGAAGAACAGGCATTCTaGCATGGGCTGGAAGAAGAGGTCGTGCAGCACCCG +
Preference number: 6 (lower is better)
Translates to: VLQLLQGEEQAF*HGLEEEVVQHP
Trigger: CGGGTGCTGCACGACCTCTTCTTCCAGCCCATGGCAGAATGCCTGTTCTTCCCCTTGGAGGAGCTGCAGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000594521.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 72 bp CATATGTCCCTCTGTCCGTGTATCTCCTATCCAGGCTaGGTGTGTGCGGGTCCGTGTTCCAGTCCCGGTCCA +
Preference number: 6 (lower is better)
Translates to: HMSLCPCISYPG*VCAGPCSSPGP
Trigger: TGGACCGGGACTGGAACACGGACCCGCACACACGCAGCCTGGATAGGAGATACACGGACAGAGGGACATATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000594417.1
ENST00000595770.1
ENST00000599589.5
CDS GCA 72 bp GGGTTCTCGGGTGTTTTTCCGCTCCGACACAGTCTGTaGCACCAGCTCGTATATCTGGGCCTCCTGGTCCCA +
Preference number: 6 (lower is better)
Translates to: GFSGVFPLRHSL*HQLVYLGLLVP
Trigger: TGGGACCAGGAGGCCCAGATATACGAGCTGGTGGCACAGACTGTGTCGGAGCGGAAAAACACCCGAGAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595723.5
CDS GCA 72 bp GAAGAATTTGGTCCCCTAGAGTTCACGGAAAGGTGCTaGCACAGGCTGATGGGGGCGCTGCCACAGGCACAG +
Preference number: 6 (lower is better)
Translates to: EEFGPLEFTERC*HRLMGALPQAQ
Trigger: CTGTGCCTGTGGCAGCGCCCCCATCAGCCTGTGGCAGCACCTTTCCGTGAACTCTAGGGGACCAAATTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 72 bp AATGACTGGCGGCTGCAGAAGCGGGAGGAGATTTTCTaGAACCAGGAGCCCTCAGCACCATCAAACCGGGCC +
Preference number: 6 (lower is better)
Translates to: NDWRLQKREEIF*NQEPSAPSNRA
Trigger: GGCCCGGTTTGATGGTGCTGAGGGCTCCTGGTTCCAGAAAATCTCCTCCCGCTTCTGCAGCCGCCAGTCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 72 bp TCCTCCTATCCTGTGCTGGGCTGGACGGGGTCTTCTTaGGATGAGACCCTTGTCTACAGATCCCCTGCCAGC +
Preference number: 6 (lower is better)
Translates to: SSYPVLGWTGSS*DETLVYRSPAS
Trigger: GCTGGCAGGGGATCTGTAGACAAGGGTCTCATCCCAAGAAGACCCCGTCCAGCCCAGCACAGGATAGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CAA 90 bp ATTCTCTCGGTCCGGGCATCAGCTGGAGACGTCTCTCGGCCACCATaGCCGTTCTCAGAGCTGCTGAGGAGGGGTTCTCGGGTGTTTTTC +
Preference number: 6 (lower is better)
Translates to: ILSVRASAGDVSRPP*PFSELLRRGSRVFF
Trigger: GAAAAACACCCGAGAACCCCTCCTCAGCAGCTCTGAGAACGGCAATGGTGGCCGAGAGACGTCTCCAGCTGATGCCCGGACCGAGAGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000595723.5
CDS TCA 72 bp ACAGCCACACGTCCTGAGGCCGCTGCCAAGAAGGAATaGATGAATCTCGGCTGTCCGAGCAGAGCATGGGAG +
Preference number: 6 (lower is better)
Translates to: TATRPEAAAKKE*MNLGCPSRAWE
Trigger: CTCCCATGCTCTGCTCGGACAGCCGAGATTCATTCATTCCTTCTTGGCAGCGGCCTCAGGACGTGTGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596957.1
CDS TCA 72 bp CATCCATCATGGCAGTTCCTACCTCACAGGTGGTGGTaGGGATGGGGTGCTTCCTGGGCGGGAACCTCAAGT +
Preference number: 6 (lower is better)
Translates to: HPSWQFLPHRWW*GWGASWAGTSS
Trigger: ACTTGAGGTTCCCGCCCAGGAAGCACCCCATCCTCACCACCACCTGTGAGGTAGGAACTGCCATGATGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599589.5
CDS GCA 72 bp ACCTCGATGAGCTCGTCCAGGCTGGGGAAGATGTTCTaGAGCTCCTCCAAGGGGAAGAACAGGCATTCTGCC +
Preference number: 6 (lower is better)
Translates to: TSMSSSRLGKMF*SSSKGKNRHSA
Trigger: GGCAGAATGCCTGTTCTTCCCCTTGGAGGAGCTGCAGAACATCTTCCCCAGCCTGGACGAGCTCATCGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000594521.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 72 bp GAGAGCACACCAGTTTTTCCGCTCCGACACAGTCTGTaGCACCAGCTCGTATATCTGGGCCTCCTGGTCCCA +
Preference number: 6 (lower is better)
Translates to: ESTPVFPLRHSL*HQLVYLGLLVP
Trigger: TGGGACCAGGAGGCCCAGATATACGAGCTGGTGGCACAGACTGTGTCGGAGCGGAAAAACTGGTGTGCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 72 bp AGAGAAGAATTTGGTCCCCTAGAGTTCACGGAAAGGTaGTGCCACAGGCTGATGGGGGCGCTGCCACAGGCA +
Preference number: 6 (lower is better)
Translates to: REEFGPLEFTER*CHRLMGALPQA
Trigger: TGCCTGTGGCAGCGCCCCCATCAGCCTGTGGCAGCACCTTTCCGTGAACTCTAGGGGACCAAATTCTTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 72 bp TCCCATCCTTCTCCTTACCAAGTTCAAAGGCGACGTTaGGAGGGACCGGCACCCGGAGAACCTGCTCAAGAG +
Preference number: 6 (lower is better)
Translates to: SHPSPYQVQRRR*EGPAPGEPAQE
Trigger: CTCTTGAGCAGGTTCTCCGGGTGCCGGTCCCTCCCAACGTCGCCTTTGAACTTGGTAAGGAGAAGGATGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596957.1
CDS CAA 90 bp CTCTCCCTCATCCCATCCTTCTCCTTACCAAGTTCAAAGGCGACGTaGGGAGGGACCGGCACCCGGAGAACCTGCTCAAGAGAGAGAATG +
Preference number: 6 (lower is better)
Translates to: LSLIPSFSLPSSKAT*GGTGTRRTCSRERM
Trigger: CATTCTCTCTCTTGAGCAGGTTCTCCGGGTGCCGGTCCCTCCCAACGTCGCCTTTGAACTTGGTAAGGAGAAGGATGGGATGAGGGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596957.1
CDS TCA 72 bp AGGCACAGAACCGAGGGTCCTTGCGTTGCTTGGCTTTaGGCTGCTCTAAGGCAAATGACTGGCGGCTGCAGA +
Preference number: 6 (lower is better)
Translates to: RHRTEGPCVAWL*AALRQMTGGCR
Trigger: TCTGCAGCCGCCAGTCATTTGCCTTAGAGCAGCTCAAAGCCAAGCAACGCAAGGACCCTCGGTTCTGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS GCA 72 bp ATCGGCTCCCCACAAGCTGATGAGGTGAGGGAGCTATaGGAGAATAAACCTCAAAATGCCCAGAGGCCGCCG +
Preference number: 6 (lower is better)
Translates to: IGSPQADEVREL*ENKPQNAQRPP
Trigger: CGGCGGCCTCTGGGCATTTTGAGGTTTATTCTCGCATAGCTCCCTCACCTCATCAGCTTGTGGGGAGCCGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 72 bp CTCCACTGCCTTGTCCTTAGTCACCCGCCACGTCAGTaGGCCCTCGTGGACCAATTTCTTCTTGGTGATGTC +
Preference number: 6 (lower is better)
Translates to: LHCLVLSHPPRQ*ALVDQFLLGDV
Trigger: GACATCACCAAGAAGAAATTGGTCCACGAGGGCCCACTGACGTGGCGGGTGACTAAGGACAAGGCAGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CAA 72 bp ATCCCATCCTTCTCCTTACCAAGTTCAAAGGCGACGTaGGGAGGGACCGGCACCCGGAGAACCTGCTCAAGA +
Preference number: 6 (lower is better)
Translates to: IPSFSLPSSKAT*GGTGTRRTCSR
Trigger: TCTTGAGCAGGTTCTCCGGGTGCCGGTCCCTCCCAACGTCGCCTTTGAACTTGGTAAGGAGAAGGATGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000596957.1
CDS TCA 72 bp TTTGGCGTCCGGATGACCAGCCTCTGGTCTTGCAGCTaGCATGTTCTTCTTTCTGCATGCCTCGGGCACTTC +
Preference number: 6 (lower is better)
Translates to: FGVRMTSLWSCS*HVLLSACLGHF
Trigger: GAAGTGCCCGAGGCATGCAGAAAGAAGAACATGTCAGCTGCAAGACCAGAGGCTGGTCATCCGGACGCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 72 bp TCCTGCACGAAGGCACAGAACCGAGGGTCCTTGCGTTaGTTGGCTTTGAGCTGCTCTAAGGCAAATGACTGG +
Preference number: 6 (lower is better)
Translates to: SCTKAQNRGSLR*LALSCSKANDW
Trigger: CCAGTCATTTGCCTTAGAGCAGCTCAAAGCCAAGCAACGCAAGGACCCTCGGTTCTGTGCCTTCGTGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 72 bp CCAGATCAGGGCCTGCTGTGCTCCCTAGACCTGGGATaGCTAACAGCTTCTTTTTCCCAACCATCAACCGTG +
Preference number: 6 (lower is better)
Translates to: PDQGLLCSLDLG*LTASFSQPSTV
Trigger: CACGGTTGATGGTTGGGAAAAAGAAGCTGTTAGCCATCCCAGGTCTAGGGAGCACAGCAGGCCCTGATCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 72 bp ACTCCCTTGCTCAGAGGGCCAGAGTCTCCGTGCATGTaGTTGTCGGGGGAACCACTCTTCTGGAAAGAGAAT +
Preference number: 6 (lower is better)
Translates to: TPLLRGPESPCM*LSGEPLFWKEN
Trigger: ATTCTCTTTCCAGAAGAGTGGTTCCCCCGACAACCACATGCACGGAGACTCTGGCCCTCTGAGCAAGGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CAA 72 bp CTGATGGTTTGGCGTCCGGATGACCAGCCTCTGGTCTaGCAGCTGACATGTTCTTCTTTCTGCATGCCTCGG +
Preference number: 6 (lower is better)
Translates to: LMVWRPDDQPLV*QLTCSSFCMPR
Trigger: CCGAGGCATGCAGAAAGAAGAACATGTCAGCTGCAAGACCAGAGGCTGGTCATCCGGACGCCAAACCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CAA 90 bp CCACAATTGTGTGGTCTGCCTTGTGAGCTGTGTGTGGTGGTTTTCTaGTTTCCAGATCAGGGCCTGCTGTGCTCCCTAGACCTGGGATGG +
Preference number: 6 (lower is better)
Translates to: PQLCGLPCELCVVVF*FPDQGLLCSLDLGW
Trigger: CCATCCCAGGTCTAGGGAGCACAGCAGGCCCTGATCTGGAAACAAGAAAACCACCACACACAGCTCACAAGGCAGACCACACAATTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 72 bp GGCACGGTTGTCCATCCACATCTCCCAGGTATCTTCTaGCTCATCCGGAGGCTTCTGGATCCACAATTGTGT +
Preference number: 6 (lower is better)
Translates to: GTVVHPHLPGIF*LIRRLLDPQLC
Trigger: ACACAATTGTGGATCCAGAAGCCTCCGGATGAGGCAGAAGATACCTGGGAGATGTGGATGGACAACCGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 72 bp CAGCCTCTGGTCTTGCAGCTGACATGTTCTTCTTTCTaGATGCCTCGGGCACTTCTCCCCACTCTATCGGTT +
Preference number: 6 (lower is better)
Translates to: QPLVLQLTCSSF*MPRALLPTLSV
Trigger: AACCGATAGAGTGGGGAGAAGTGCCCGAGGCATGCAGAAAGAAGAACATGTCAGCTGCAAGACCAGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 72 bp CGTTGCTTGGCTTTGAGCTGCTCTAAGGCAAATGACTaGCGGCTGCAGAAGCGGGAGGAGATTTTCTGGAAC +
Preference number: 6 (lower is better)
Translates to: RCLALSCSKAND*RLQKREEIFWN
Trigger: GTTCCAGAAAATCTCCTCCCGCTTCTGCAGCCGCCAGTCATTTGCCTTAGAGCAGCTCAAAGCCAAGCAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 72 bp TTGTCCTTAGTCACCCGCCACGTCAGTGGGCCCTCGTaGACCAATTTCTTCTTGGTGATGTCCAGGTTCTTG +
Preference number: 6 (lower is better)
Translates to: LSLVTRHVSGPS*TNFFLVMSRFL
Trigger: CAAGAACCTGGACATCACCAAGAAGAAATTGGTCCACGAGGGCCCACTGACGTGGCGGGTGACTAAGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CCA 72 bp GATCTGCTTTTCCAGACCCTCCAGGCACTAGCTCGCTaGTTTAATTCGCTAAAAGCTGTGCCTGTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: DLLFQTLQALAR*FNSLKAVPVPA
Trigger: GGCTGGGACAGGCACAGCTTTTAGCGAATTAAACCAGCGAGCTAGTGCCTGGAGGGTCTGGAAAAGCAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 72 bp TCACCTGCTGGGTTTTCTAGACTCTGCGGGTGTTTCTaGATGGCACGGTTGTCCATCCACATCTCCCAGGTA +
Preference number: 6 (lower is better)
Translates to: SPAGFSRLCGCF*MARLSIHISQV
Trigger: TACCTGGGAGATGTGGATGGACAACCGTGCCATCCAGAAACACCCGCAGAGTCTAGAAAACCCAGCAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CAA 72 bp TCAGCTTCCTGCACGAAGGCACAGAACCGAGGGTCCTaGCGTTGCTTGGCTTTGAGCTGCTCTAAGGCAAAT +
Preference number: 6 (lower is better)
Translates to: SASCTKAQNRGS*RCLALSCSKAN
Trigger: ATTTGCCTTAGAGCAGCTCAAAGCCAAGCAACGCAAGGACCCTCGGTTCTGTGCCTTCGTGCAGGAAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000594044.1
ENST00000594258.1
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CAA 72 bp CGCCACGTCAGTGGGCCCTCGTGGACCAATTTCTTCTaGGTGATGTCCAGGTTCTTGAACTCGCTCAGCATA +
Preference number: 6 (lower is better)
Translates to: RHVSGPSWTNFF*VMSRFLNSLSI
Trigger: TATGCTGAGCGAGTTCAAGAACCTGGACATCACCAAGAAGAAATTGGTCCACGAGGGCCCACTGACGTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000595723.5
ENST00000595897.5
ENST00000599589.5
ENST00000599846.5
ENST00000600274.5
CDS CAA 72 bp TGTGGTCTGCCTTGTGAGCTGTGTGTGGTGGTTTTCTaGTTTCCAGATCAGGGCCTGCTGTGCTCCCTAGAC +
Preference number: 6 (lower is better)
Translates to: CGLPCELCVVVF*FPDQGLLCSLD
Trigger: GTCTAGGGAGCACAGCAGGCCCTGATCTGGAAACAAGAAAACCACCACACACAGCTCACAAGGCAGACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CAA 90 bp TCTGCATATCTGATGGTTTGGCGTCCGGATGACCAGCCTCTGGTCTaGCAGCTGACATGTTCTTCTTTCTGCATGCCTCGGGCACTTCTC +
Preference number: 6 (lower is better)
Translates to: SAYLMVWRPDDQPLV*QLTCSSFCMPRALL
Trigger: GAGAAGTGCCCGAGGCATGCAGAAAGAAGAACATGTCAGCTGCAAGACCAGAGGCTGGTCATCCGGACGCCAAACCATCAGATATGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS TCA 72 bp ATGTCCACAATCTGGTGTTCTAGAAACCCCAAGGCTTaGATAGGGGACTCCCTTGCTCAGAGGGCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: MSTIWCSRNPKA*IGDSLAQRARV
Trigger: GACTCTGGCCCTCTGAGCAAGGGAGTCCCCTATTCAAGCCTTGGGGTTTCTAGAACACCAGATTGTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 72 bp CTGCTGGGTTTTCTAGACTCTGCGGGTGTTTCTGGATaGCACGGTTGTCCATCCACATCTCCCAGGTATCTT +
Preference number: 6 (lower is better)
Translates to: LLGFLDSAGVSG*HGCPSTSPRYL
Trigger: AAGATACCTGGGAGATGTGGATGGACAACCGTGCCATCCAGAAACACCCGCAGAGTCTAGAAAACCCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CAA 90 bp CCATCAACCGTGAATGACTGCGTGCTGGCATCTGCCAAAAAGGCTTaGGAGAGAAGAATTTGGTCCCCTAGAGTTCACGGAAAGGTGCTG +
Preference number: 6 (lower is better)
Translates to: PSTVNDCVLASAKKA*ERRIWSPRVHGKVL
Trigger: CAGCACCTTTCCGTGAACTCTAGGGGACCAAATTCTTCTCTCCAAAGCCTTTTTGGCAGATGCCAGCACGCAGTCATTCACGGTTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 72 bp CGCTTCACCTGCTCCAGGCTCTGGAACTGGCTGTTTTaGTCTTCTGAGTTTGTCTCCAGCTCGTTCTCAAAA +
Preference number: 6 (lower is better)
Translates to: RFTCSRLWNWLF*SSEFVSSSFSK
Trigger: TTTTGAGAACGAGCTGGAGACAAACTCAGAAGAGCAAAACAGCCAGTTCCAGAGCCTGGAGCAGGTGAAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000337665.8
ENST00000347545.8
ENST00000354532.8
ENST00000378152.8
ENST00000599846.5
ENST00000600274.5
ENST00000600387.5
CDS GCA 72 bp TCCCTTTCTAAATCACCTGCTGGGTTTTCTAGACTCTaGGGGTGTTTCTGGATGGCACGGTTGTCCATCCAC +
Preference number: 6 (lower is better)
Translates to: SLSKSPAGFSRL*GCFWMARLSIH
Trigger: GTGGATGGACAACCGTGCCATCCAGAAACACCCGCAGAGTCTAGAAAACCCAGCAGGTGATTTAGAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 72 bp TCCACTGCATTCAAGTCCAGGCTCACCTCATCCCTGTaGGACTTTGGCCAAGTTACTTTTCCTGTCAGAACC +
Preference number: 6 (lower is better)
Translates to: STAFKSRLTSSL*DFGQVTFPVRT
Trigger: GGTTCTGACAGGAAAAGTAACTTGGCCAAAGTCCCACAGGGATGAGGTGAGCCTGGACTTGAATGCAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000594417.1
CDS CCA 72 bp CTGGCATCTGCCAAAAAGGCTTTGGAGAGAAGAATTTaGTCCCCTAGAGTTCACGGAAAGGTGCTGCCACAG +
Preference number: 6 (lower is better)
Translates to: LASAKKALERRI*SPRVHGKVLPQ
Trigger: CTGTGGCAGCACCTTTCCGTGAACTCTAGGGGACCAAATTCTTCTCTCCAAAGCCTTTTTGGCAGATGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CAA 72 bp TTTTCTAGACTCTGCGGGTGTTTCTGGATGGCACGGTaGTCCATCCACATCTCCCAGGTATCTTCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: FSRLCGCFWMAR*SIHISQVSSAS
Trigger: TGAGGCAGAAGATACCTGGGAGATGTGGATGGACAACCGTGCCATCCAGAAACACCCGCAGAGTCTAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 72 bp TCATCCGGAGGCTTCTGGATCCACAATTGTGTGGTCTaGCTTGTGAGCTGTGTGTGGTGGTTTTCTTGTTTC +
Preference number: 6 (lower is better)
Translates to: SSGGFWIHNCVV*LVSCVWWFSCF
Trigger: GAAACAAGAAAACCACCACACACAGCTCACAAGGCAGACCACACAATTGTGGATCCAGAAGCCTCCGGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 72 bp TCTACCCTGGGCACTTGTAAGCCTGTTGAGGTCACGTaGCATGCTTTCTGGCTCTTGTCTAAAGCATTCTCT +
Preference number: 6 (lower is better)
Translates to: STLGTCKPVEVT*HAFWLLSKAFS
Trigger: AGAGAATGCTTTAGACAAGAGCCAGAAAGCATGCCACGTGACCTCAACAGGCTTACAAGTGCCCAGGGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 72 bp TCTCCGTGCATGTGGTTGTCGGGGGAACCACTCTTCTaGAAAGAGAATGTAGACAGGGGAAAGACTGCAATT +
Preference number: 6 (lower is better)
Translates to: SPCMWLSGEPLF*KENVDRGKTAI
Trigger: AATTGCAGTCTTTCCCCTGTCTACATTCTCTTTCCAGAAGAGTGGTTCCCCCGACAACCACATGCACGGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS TCA 72 bp GCTAACAGCTTCTTTTTCCCAACCATCAACCGTGAATaGCTGCGTGCTGGCATCTGCCAAAAAGGCTTTGGA +
Preference number: 6 (lower is better)
Translates to: ANSFFFPTINRE*LRAGICQKGFG
Trigger: TCCAAAGCCTTTTTGGCAGATGCCAGCACGCAGTCATTCACGGTTGATGGTTGGGAAAAAGAAGCTGTTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS TCA 72 bp CTAATTTTCTGCATATCTGATGGTTTGGCGTCCGGATaGCCAGCCTCTGGTCTTGCAGCTGACATGTTCTTC +
Preference number: 6 (lower is better)
Translates to: LIFCISDGLASG*PASGLAADMFF
Trigger: GAAGAACATGTCAGCTGCAAGACCAGAGGCTGGTCATCCGGACGCCAAACCATCAGATATGCAGAAAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS GCA 72 bp ACAGCTTCTTTTTCCCAACCATCAACCGTGAATGACTaGGTGCTGGCATCTGCCAAAAAGGCTTTGGAGAGA +
Preference number: 6 (lower is better)
Translates to: TASFSQPSTVND*VLASAKKALER
Trigger: TCTCTCCAAAGCCTTTTTGGCAGATGCCAGCACGCAGTCATTCACGGTTGATGGTTGGGAAAAAGAAGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CCA 72 bp ATTCAAGTCCAGGCTCACCTCATCCCTGTGGGACTTTaGCCAAGTTACTTTTCCTGTCAGAACCTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: IQVQAHLIPVGL*PSYFSCQNLSF
Trigger: GAAACTGAGGTTCTGACAGGAAAAGTAACTTGGCCAAAGTCCCACAGGGATGAGGTGAGCCTGGACTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS CAA 72 bp CATTCAAGTCCAGGCTCACCTCATCCCTGTGGGACTTaGGCCAAGTTACTTTTCCTGTCAGAACCTCAGTTT +
Preference number: 6 (lower is better)
Translates to: HSSPGSPHPCGT*AKLLFLSEPQF
Trigger: AAACTGAGGTTCTGACAGGAAAAGTAACTTGGCCAAAGTCCCACAGGGATGAGGTGAGCCTGGACTTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000594417.1
ENST00000599589.5
CDS CAA 90 bp GGCACTTGTAAGCCTGTTGAGGTCACGTGGCATGCTTTCTGGCTCTaGTCTAAAGCATTCTCTCTTTCTAGATCTGGCTCTCTGTGTTCT +
Preference number: 6 (lower is better)
Translates to: GTCKPVEVTWHAFWL*SKAFSLSRSGSLCS
Trigger: AGAACACAGAGAGCCAGATCTAGAAAGAGAGAATGCTTTAGACAAGAGCCAGAAAGCATGCCACGTGACCTCAACAGGCTTACAAGTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600387.5
CDS CAA 72 bp TTATTTAGAGTCGCGATTCGACATCTGTTTTCAAATTaGATCAGCTCTGAACTTTATTTTCCGAGTTTGAGG +
Preference number: 6 (lower is better)
Translates to: LFRVAIRHLFSN*ISSELYFPSLR
Trigger: CCTCAAACTCGGAAAATAAAGTTCAGAGCTGATCAAATTTGAAAACAGATGTCGAATCGCGACTCTAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000594513.1