RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP9 (Homo sapiens)

Ensembl gene IDs: ENSG00000123329

Ensembl transcript IDs: ENST00000393791.8, ENST00000393797.7, ENST00000424809.6, ENST00000430041.6, ENST00000546200.5, ENST00000546704.1, ENST00000547216.1, ENST00000548139.5, ENST00000548148.5, ENST00000550130.1, ENST00000550288.6, ENST00000550399.5, ENST00000550440.5, ENST00000550454.5, ENST00000551000.1, ENST00000551452.5, ENST00000551574.1, ENST00000552066.1, ENST00000552249.1, ENST00000552420.5, ENST00000552604.5, ENST00000552953.5

Found 683 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTGAGCATCAGCTGGACCAGCTGCCCTGGGTAGAGAGCATGGGCTaGTGGGTCAGATGTCTCCTGCTCTGGCCGAAACAGGGTTGGTCC +
Preference number: 1 (lower is better)
Translates to: GEHQLDQLPWVESMG*WVRCLLLWPKQGWS
Trigger: GGACCAACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCCAGCAGCCCATGCTCTCTACCCAGGGCAGCTGGTCCAGCTGATGCTCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
3UTR-3UTR GCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCCTCTTCTTCCTTCCCTaGATCAGGGGAAGAGGCTGG +
Preference number: 2 (lower is better)
Translates to: APSPIPTPQVTLMKIETVLFFLP*IRGRGW
Trigger: CCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGAG...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
3UTR-3UTR GCA 90 bp CTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATCAGCGGTTGTGGGGTGTCATaGGATTCTTATCTGAGTGTG +
Preference number: 2 (lower is better)
Translates to: LLPSLHQGKRLVKLVSISGCGVS*DSYLSV
Trigger: CACACTCAGATAAGAATCGCATGACACCCCACAACC...GCTGATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
3UTR-3UTR GCA 90 bp AGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCGGGTCAGATGTCTCCTaGTCTGGCCGAAACAGGGTT +
Preference number: 2 (lower is better)
Translates to: REAGVNPLTFLFREAPSPGSDVS*SGRNRV
Trigger: AACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCC...GGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
3UTR-3UTR GCA 90 bp TCTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATCAGGGTTGTGGGGTGTCATaGGATTCTTATCTGAGTGTG +
Preference number: 2 (lower is better)
Translates to: SSSFPASGEEAGEVGEHQGCGVS*DSYLSV
Trigger: CACACTCAGATAAGAATCGCATGACACCCCACAACC...CTGATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
3UTR-3UTR TCA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACACATGCGATTCTTATCTaGGTGTGCTATCACCCTGCA +
Preference number: 2 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETHAILI*VCYHPA
Trigger: TGCAGGGTGATAGCACACTCAGATAAGAATCGCATG...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550288.6
3UTR-3UTR TCA 90 bp GGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACATCTCACCACCAGAGATaGCCGGAAATATGTTTTCTC +
Preference number: 2 (lower is better)
Translates to: GVNPLTFLFREAPSPIPTSHHQR*PEICFL
Trigger: GAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGA...TGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
3UTR-3UTR TCA 90 bp TCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCTCACCACCAGAGATaGCCGGAAATATGTTTTCTC +
Preference number: 2 (lower is better)
Translates to: SLSSLEKLPHPSQHLKSHSHHQR*PEICFL
Trigger: GAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGA...GTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
3UTR-3UTR TCA 90 bp GAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTCTCACCACCAGAGATaGCCGGAAATATGTTTTCTC +
Preference number: 2 (lower is better)
Translates to: EHQPLTTRDDRKYVFSSSSHHQR*PEICFL
Trigger: GAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGA...GGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
3UTR-3UTR GCA 90 bp ATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACATCACCCTGCATAAATaGTCCAGGAGGTACCGTAGA +
Preference number: 2 (lower is better)
Translates to: MLGRNDNREQEEKQGLIHITLHK*SRRYRR
Trigger: TCTACGGTACCTCCTGGAGCATTTATGCAGGGTGAT...GTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550288.6
3UTR-3UTR CCA 90 bp ACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTACAATTCCCAGGTTGTaGGGTGTCATGCGATTCTTA +
Preference number: 2 (lower is better)
Translates to: TEHQPLTTRDDRKYVFSSTIPRL*GVMRFL
Trigger: TAAGAATCGCATGACACCCCACAACCTGGGAATTGT...AGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
3UTR-3UTR CCA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTGGCCGAAACAGGGTTaGTCCAAACACAATTCCCAG +
Preference number: 2 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGWPKQG*SKHNSQ
Trigger: CTGGGAATTGTGTTTGGACCAACCCTGTTTCGGCCA...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
3UTR-3UTR TCA 90 bp AGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTCACCACCAGAGATaGCCGGAAATATGTTTTCTC +
Preference number: 2 (lower is better)
Translates to: RNDNREQEEKQGLIHSLSSHHQR*PEICFL
Trigger: GAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGA...GGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
3UTR-3UTR GCA 90 bp ATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGGGGTCAGATGTCTCCTaGTCTGGCCGAAACAGGGTT +
Preference number: 2 (lower is better)
Translates to: MPLYVLLCWGGMITGNKKGSDVS*SGRNRV
Trigger: AACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCC...CTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
3UTR CAA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTaGGGAGATTTAAAGGGATATCCTCAAAACAGAACACCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: HPNTSSHTHEDRDSH*GDLKGYPQNRTPAS
Trigger: AGAGGCTGGTGTTCTGTTTTGAGGATATCCCTTTAAATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
3UTR-3UTR CCA 90 bp AGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTTATGTATTATTATGTTaGGGAGGAATGATAACAGGG +
Preference number: 2 (lower is better)
Translates to: SSLTHPNTSSHTHEDRDSYVLLC*GGMITG
Trigger: CCCTGTTATCATTCCTCCCCAACATAATAATACATA...ACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
3UTR-3UTR CCA 90 bp ACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTTAAAGGGAACAATTCCCAGGTTGTaGGGTGTCATGCGATTCTTA +
Preference number: 2 (lower is better)
Translates to: TSSHTHEDRDSHLGDLKGTIPRL*GVMRFL
Trigger: TAAGAATCGCATGACACCCCACAACCTGGGAATTGT...TCCCTTTAAATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
3UTR-3UTR TCA 90 bp CATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAATCTCACCACCAGAGATaGCCGGAAATATGTTTTCTC +
Preference number: 2 (lower is better)
Translates to: HATLCIIMLGRNDNREQESHHQR*PEICFL
Trigger: GAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGA...TTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
3UTR-3UTR CCA 90 bp GTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTATGTATTATTATGTTaGGGAGGAATGATAACAGGG +
Preference number: 2 (lower is better)
Translates to: VLLCWGGMITGNKKRSRGYVLLC*GGMITG
Trigger: CCCTGTTATCATTCCTCCCCAACATAATAATACATA...ACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
3UTR-3UTR CAA 90 bp GTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTAAGAGGCTGGTGAAGTaGGTGAGCATCAGCTGGACC +
Preference number: 3 (lower is better)
Translates to: VNPLTFLFREAPSPIPTPKRLVK*VSISWT
Trigger: GGTCCAGCTGATGCTCACCAACTTCACCAGCCTCTT...AGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
3UTR-3UTR CAA 90 bp ACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTAACACAATTCCCAGGTaGTGGGGTGTCATGCGATTC +
Preference number: 3 (lower is better)
Translates to: TEHQPLTTRDDRKYVFSSNTIPR*WGVMRF
Trigger: GAATCGCATGACACCCCACAACCTGGGAATTGTGTT...AGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
3UTR-3UTR CAA 90 bp GGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACAGATAGAGACAGTCATTaGGGAGATTTAAAGGGATAT +
Preference number: 3 (lower is better)
Translates to: GVNPLTFLFREAPSPIPTDRDSH*GDLKGY
Trigger: ATATCCCTTTAAATCTCCCAAATGACTGTCTCTATC...TGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
3UTR-3UTR CAA 90 bp CTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGGATAGAGACAGTCATTaGGGAGATTTAAAGGGATAT +
Preference number: 3 (lower is better)
Translates to: LFREAPSPIPTPQVTLMKDRDSH*GDLKGY
Trigger: ATATCCCTTTAAATCTCCCAAATGACTGTCTCTATC...CTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
3UTR-3UTR CAA 90 bp ATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAAGAGGCTGGTGAAGTaGGTGAGCATCAGCTGGACC +
Preference number: 3 (lower is better)
Translates to: MPLYVLLCWGGMITGNKKKRLVK*VSISWT
Trigger: GGTCCAGCTGATGCTCACCAACTTCACCAGCCTCTT...CTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
3UTR-3UTR CAA 90 bp CAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTGATAGAGACAGTCATTaGGGAGATTTAAAGGGATAT +
Preference number: 3 (lower is better)
Translates to: QEEKQGLIHSLSSLEKLPDRDSH*GDLKGY
Trigger: ATATCCCTTTAAATCTCCCAAATGACTGTCTCTATC...AGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
3UTR-3UTR CAA 90 bp ACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTGATAGAGACAGTCATTaGGGAGATTTAAAGGGATAT +
Preference number: 3 (lower is better)
Translates to: TEHQPLTTRDDRKYVFSSDRDSH*GDLKGY
Trigger: ATATCCCTTTAAATCTCCCAAATGACTGTCTCTATC...AGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
3UTR-3UTR CAA 90 bp CCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAACACAATTCCCAGGTaGTGGGGTGTCATGCGATTC +
Preference number: 3 (lower is better)
Translates to: PLYVLLCWGGMITGNKKRNTIPR*WGVMRF
Trigger: GAATCGCATGACACCCCACAACCTGGGAATTGTGTT...TCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
3UTR-3UTR CAA 90 bp CTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCGATAGAGACAGTCATTaGGGAGATTTAAAGGGATAT +
Preference number: 3 (lower is better)
Translates to: LYVLLCWGGMITGNKKRSDRDSH*GDLKGY
Trigger: ATATCCCTTTAAATCTCCCAAATGACTGTCTCTATC...GCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp GGGCTGCTGGGTCAGATGTCTCCTGCTCTGGCCGAAACAGGGTTGGTCCAAACATTGCGCACGCGGTTCTaGTCGGTGCCTTCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GLLGQMSPALAETGLVQTLRTRF*SVPSGP
Trigger: GGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAA...TGTTTGGACCAACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCCAGCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCCGCTGGTCCCCAGCCTaGGGAGGGCGCTGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: APSPIPTPQVTLMKIETVRWSPA*GGRCRR
Trigger: CCGCCGACAGCGCCCTCCTCAGGCTGGGGACCAGCG...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATCAGGGACGTTGCGGCGGCTaGACAGGTGGCGGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: SSSFPASGEEAGEVGEHQGRCGG*TGGGRA
Trigger: CGCACGGCCGCCACCTGTCCAGCCGCCGCAACGTCC...CTGATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp AGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCGCTGGTCCCCAGCCTaGGGAGGGCGCTGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: SSLTHPNTSSHTHEDRDSRWSPA*GGRCRR
Trigger: CCGCCGACAGCGCCCTCCTCAGGCTGGGGACCAGCG...ACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTCGCTGGTCCCCAGCCTaGGGAGGGCGCTGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPRWSPA*GGRCRR
Trigger: CCGCCGACAGCGCCCTCCTCAGGCTGGGGACCAGCG...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACAAGCTCCGGCGGCTGCTaGGGCGCAGCAGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GVNPLTFLFREAPSPIPTSSGGC*GAAAAW
Trigger: CCAAGCCGCTGCTGCGCCTCAGCAGCCGCCGGAGCT...TGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp AGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTAGCTCCGGCGGCTGCTaGGGCGCAGCAGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSLTHPNTSSHTHEDRDSSSGGC*GAAAAW
Trigger: CCAAGCCGCTGCTGCGCCTCAGCAGCCGCCGGAGCT...ACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACGGACGTTGCGGCGGCTaGACAGGTGGCGGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHGRCGG*TGGGRA
Trigger: CGCACGGCCGCCACCTGTCCAGCCGCCGCAACGTCC...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GGGCTGCTGGGTCAGATGTCTCCTGCTCTGGCCGAAACAGGGTTGGTCCAAACATTCCCGCTGGCAGAGTaGTTCCAACTGGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: GLLGQMSPALAETGLVQTFPLAE*FQLAAE
Trigger: TTCGGCTGCCAGTTGGAATCACTCTGCCAGCGGGAA...TGTTTGGACCAACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCCAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACACAGGGTTCGTCTCGCTaGGACTGCGGCGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETQGSSR*DCGAGA
Trigger: AGCCCCCGCGCCGCAGTCGCAGCGAGACGAACCCTG...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAGGGTTCGTCTCGCTaGGACTGCGGCGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: KQGLIHSLSSLEKLPHPSQGSSR*DCGAGA
Trigger: AGCCCCCGCGCCGCAGTCGCAGCGAGACGAACCCTG...GGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCCGCAGCGCGCGGTaGCAGGCTCGCAGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETVRSAR*QARSSV
Trigger: GACAGAGCTGCGAGCCTGGCACCGCGCGCTGCGGAC...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACGTCCGCAGCGCGCGGTaGCAGGCTCGCAGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: SLSSLEKLPHPSQHLKSHVRSAR*QARSSV
Trigger: GACAGAGCTGCGAGCCTGGCACCGCGCGCTGCGGAC...GTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGGACGTTGCGGCGGCTaGACAGGTGGCGGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: NPLTFLFREAPSPIPTPQGRCGG*TGGGRA
Trigger: CGCACGGCCGCCACCTGTCCAGCCGCCGCAACGTCC...TTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGGATCCAGCCGCTCGATaGCAGTCCGCAGCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIEDPAAR*QSAARG
Trigger: ACCGCGCGCTGCGGACTGTCATCGAGCGGCTGGATC...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCCAGGGTTCGTCTCGCTaGGACTGCGGCGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LIHSLSSLEKLPHPSQHLQGSSR*DCGAGA
Trigger: AGCCCCCGCGCCGCAGTCGCAGCGAGACGAACCCTG...GAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp GAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCGGGTCGTCCAGGAGCTaGGGCAGAGGTCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: EHQPLTTRDDRKYVFSSSGSSRS*GRGRGA
Trigger: GGCCCCTCGACCTCTGCCGCAGCTCCTGGACGACCC...GGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp GTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTGGGTCGTCCAGGAGCTaGGGCAGAGGTCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VNPLTFLFREAPSPIPTPGSSRS*GRGRGA
Trigger: GGCCCCTCGACCTCTGCCGCAGCTCCTGGACGACCC...AGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGGTCCGCAGCGCGCGGTaGCAGGCTCGCAGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWEVRSAR*QARSSV
Trigger: GACAGAGCTGCGAGCCTGGCACCGCGCGCTGCGGAC...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCTTGCGCACGCGGTTCTaGTCGGTGCCTTCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: KQGLIHSLSSLEKLPHPSLRTRF*SVPSGP
Trigger: GGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAA...GGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATCAGCTGTGCAGCAGGAACTCGTaGCCAGGGATCGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: SSFPASGEEAGEVGEHQLCSRNS*PGIVRM
Trigger: CATCCGCACGATCCCTGGCCACGAGTTCCTGCTGCA...CAGCTGATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCGATCCCCACTCCCTTaGTCCCGGCCGGTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: EEKQGLIHSLSSLEKLPHRSPLP*SRPVGA
Trigger: GGCTCCGACCGGCCGGGACCAAGGGAGTGGGGATCG...GTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393797.7
CDS-3UTR CCA 90 bp CTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGGCCTGCCGCCAGCTCTaGGCTGAGGTGACCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LFREAPSPIPTPQVTLMKACRQL*AEVTQG
Trigger: ACCCTGGGTCACCTCAGCCCAGAGCTGGCGGCAGGC...CTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430041.6
CDS-3UTR CCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCTCTGACATGAGGGGCTaGGGGCCTGCCGCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: APSPIPTPQVTLMKIETVSDMRG*GPAASS
Trigger: AGAGCTGGCGGCAGGCCCCCAGCCCCTCATGTCAGA...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430041.6
CDS-3UTR TCA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGCGCTGGTCCCCAGCCTaGGGAGGGCGCTGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGRWSPA*GGRCRR
Trigger: CCGCCGACAGCGCCCTCCTCAGGCTGGGGACCAGCG...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CCAAACACAATTCCCAGGTTGTGGGGTGTCATGCGATTCTTATCTGAGTGTGCTGATCCAGCCGCTCGATaGCAGTCCGCAGCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: PNTIPRLWGVMRFLSECADPAAR*QSAARG
Trigger: ACCGCGCGCTGCGGACTGTCATCGAGCGGCTGGATC...AGCACACTCAGATAAGAATCGCATGACACCCCACAACCTGGGAATTGTGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp TCAAAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTAGCTCCGGCGGCTGCTaGGGCGCAGCAGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SKQNTSLSPPEMTGNMFSSSGGC*GAAAAW
Trigger: CCAAGCCGCTGCTGCGCCTCAGCAGCCGCCGGAGCT...AGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp AACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAGCTCCGGCGGCTGCTaGGGCGCAGCAGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: NREQEEKQGLIHSLSSLESSGGC*GAAAAW
Trigger: CCAAGCCGCTGCTGCGCCTCAGCAGCCGCCGGAGCT...CTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCGCTGGGGGCCTGCTGTaGTGGCACTGGCTTCTGACG +
Preference number: 4 (lower is better)
Translates to: REAGVNPLTFLFREAPSPAGGLL*WHWLLT
Trigger: CGTCAGAAGCCAGTGCCAGCACAGCAGGCCCCCAGC...GGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCGAGGGGCTGGGGGCCTaGTGTGCTGGCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LIHSLSSLEKLPHPSQHLEGLGA*CAGTGF
Trigger: GAAGCCAGTGCCAGCACAGCAGGCCCCCAGCCCCTC...GAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGGTCGTCCAGGAGCTaGGGCAGAGGTCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LTHPNTSSHTHEDRDSHLGSSRS*GRGRGA
Trigger: GGCCCCTCGACCTCTGCCGCAGCTCCTGGACGACCC...CAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGGGATGTGCAGGACGTTaGGGCGGCTGGACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LFREAPSPIPTPQVTLMKGCAGR*GGWTGG
Trigger: GCCACCTGTCCAGCCGCCGCAACGTCCTGCACATCC...CTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTCGCGGTTCTGCTCGGTaGCTTCGGGCCCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPRGSAR*LRAPEW
Trigger: CCATTCGGGGGCCCGAAGGCACCGAGCAGAACCGCG...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TCTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATCAGAGCAGACCCCGCTCCTaGAGGCTTTGTAAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: SSSFPASGEEAGEVGEHQSRPRS*RLCKGG
Trigger: ACCGCCCTTACAAAGCCTGCAGGAGCGGGGTCTGCT...CTGATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATCAGCCATTTTGCGGGGAAGTaGAGGAGGCTGCTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: LLPSLHQGKRLVKLVSISHFAGK*RRLLRA
Trigger: AGCTCGGAGCAGCCTCCTCCACTTCCCCGCAAAATG...GCTGATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTGGGGGCCTGCTGTGCTaGCACTGGCTTCTGACGGCA +
Preference number: 4 (lower is better)
Translates to: SSLTHPNTSSHTHEDRDSGGLLC*HWLLTA
Trigger: TGCCGTCAGAAGCCAGTGCCAGCACAGCAGGCCCCC...ACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCGGGGGCCTGCTGTGCTaGCACTGGCTTCTGACGGCA +
Preference number: 4 (lower is better)
Translates to: TFLFREAPSPIPTPQVTLGGLLC*HWLLTA
Trigger: TGCCGTCAGAAGCCAGTGCCAGCACAGCAGGCCCCC...GAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCGGGCGCTGTCGGCGGTaGCTCTCGGTAGAACACCAG +
Preference number: 4 (lower is better)
Translates to: TFLFREAPSPIPTPQVTLGRCRR*LSVEHQ
Trigger: CTGGTGTTCTACCGAGAGCCACCGCCGACAGCGCCC...GAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGGGCGCTGTCGGCGGTaGCTCTCGGTAGAACACCAG +
Preference number: 4 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETGRCRR*LSVEHQ
Trigger: CTGGTGTTCTACCGAGAGCCACCGCCGACAGCGCCC...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTGGCAGCCGAACACCTaGTCTCGGAGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: SLSSLEKLPHPSQHLKSHWQPNT*SRSRPR
Trigger: GCGGGGTCTGCTCCGAGACCAGGTGTTCGGCTGCCA...GTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp TTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATATGCTCCGAGCTAGCCTaGGCCCTGCTTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: FREAPSPIPTPQVTLMKICSELA*ALLGRA
Trigger: GGCCCTCCCAAGCAGGGCTCAGGCTAGCTCGGAGCA...TATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp ATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTAGCTCCGGCGGCTGCTaGGGCGCAGCAGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: IPTPQVTLMKIETVIWEISSGGC*GAAAAW
Trigger: CCAAGCCGCTGCTGCGCCTCAGCAGCCGCCGGAGCT...AATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp AGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCACCTCCCATCGGAGGTaGCCGCACGCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: REAGVNPLTFLFREAPSPTSHRR*PHALCP
Trigger: TGGACAGAGAGCGTGCGGTCACCTCCGATGGGAGGT...GGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp AATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGCTGGGGGCCTGCTGTaGTGGCACTGGCTTCTGACG +
Preference number: 4 (lower is better)
Translates to: NPLTFLFREAPSPIPTPQAGGLL*WHWLLT
Trigger: CGTCAGAAGCCAGTGCCAGCACAGCAGGCCCCCAGC...TTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGGGGCTGGGGGCCTaGTGTGCTGGCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FREAPSPIPTPQVTLMKIEGLGA*CAGTGF
Trigger: GAAGCCAGTGCCAGCACAGCAGGCCCCCAGCCCCTC...TATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGTTGGGGTCCAGGTGCTaGTCCCAGGCATCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIELGSRC*SQASSL
Trigger: GAGGCTGGATGCCTGGGAGCAGCACCTGGACCCCAA...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp GGGCTGCTGGGTCAGATGTCTCCTGCTCTGGCCGAAACAGGGTTGGTCCAAACAAGATCTGAAGCCCTTTaGCTGAGGTTGCAGGACATC +
Preference number: 4 (lower is better)
Translates to: GLLGQMSPALAETGLVQTRSEAL*LRLQDI
Trigger: GATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCT...TGTTTGGACCAACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCCAGCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAAGCTGGAGGGTCAAGCTaGGAGGTGCGTTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QGLIHSLSSLEKLPHPSQAGGSS*EVRWLR
Trigger: CCTCAGCCAACGCACCTCGCAGCTTGACCCTCCAGC...TTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCAGAGGTCGAGGGGCCTaGAAGGCTGGAGGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: KQGLIHSLSSLEKLPHPSRGRGA*KAGGSS
Trigger: GCTTGACCCTCCAGCCTTGCAGGCCCCTCGACCTCT...GGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAAAGAGGTCGAGGGGCCTaGAAGGCTGGAGGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: QGLIHSLSSLEKLPHPSQRGRGA*KAGGSS
Trigger: GCTTGACCCTCCAGCCTTGCAGGCCCCTCGACCTCT...TTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGGGGTCGTCCAGGAGCTaGGGCAGAGGTCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: REQEEKQGLIHSLSSLEKGSSRS*GRGRGA
Trigger: GGCCCCTCGACCTCTGCCGCAGCTCCTGGACGACCC...CTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGCGCGGTTCTGCTCGGTaGCTTCGGGCCCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: SPIPTPQVTLMKIETVIWRGSAR*LRAPEW
Trigger: CCATTCGGGGGCCCGAAGGCACCGAGCAGAACCGCG...CCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGCGCGGTTCTGCTCGGTaGCTTCGGGCCCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: LTHPNTSSHTHEDRDSHLRGSAR*LRAPEW
Trigger: CCATTCGGGGGCCCGAAGGCACCGAGCAGAACCGCG...CAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTTTGCGCACGCGGTTCTaGTCGGTGCCTTCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: QEEKQGLIHSLSSLEKLPLRTRF*SVPSGP
Trigger: GGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAA...AGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTGGGGGCCTGCTGTGCTaGCACTGGCTTCTGACGGCA +
Preference number: 4 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPGGLLC*HWLLTA
Trigger: TGCCGTCAGAAGCCAGTGCCAGCACAGCAGGCCCCC...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCTCTGTGTCCCCTCCATaGAGCCAGGGTTCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: APSPIPTPQVTLMKIETVSVSPP*SQGSSR
Trigger: GCGAGACGAACCCTGGCTCCATGGAGGGGACACAGA...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCAGCTGCGAGGTGCGTTaGCTGAGGCTGAGTGAACCC +
Preference number: 4 (lower is better)
Translates to: APSPIPTPQVTLMKIETVSCEVR*LRLSEP
Trigger: GGGTTCACTCAGCCTCAGCCAACGCACCTCGCAGCT...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACAGGGGCCTGCAAGGCTaGAGGGTCAAGCTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHRGLQG*RVKLRG
Trigger: ACCTCGCAGCTTGACCCTCCAGCCTTGCAGGCCCCT...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGAGGGGCCTGCAAGGCTaGAGGGTCAAGCTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIERGLQG*RVKLRG
Trigger: ACCTCGCAGCTTGACCCTCCAGCCTTGCAGGCCCCT...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCAGGGGCCTGCAAGGCTaGAGGGTCAAGCTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: REAGVNPLTFLFREAPSPRGLQG*RVKLRG
Trigger: ACCTCGCAGCTTGACCCTCCAGCCTTGCAGGCCCCT...GGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGTGGCAGCCGAACACCTaGTCTCGGAGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWEWQPNT*SRSRPR
Trigger: GCGGGGTCTGCTCCGAGACCAGGTGTTCGGCTGCCA...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCGGTGGCACCAGAGGCTaGGGCAGCTCCCGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: TFLFREAPSPIPTPQVTLGGTRG*GSSRRK
Trigger: TTTTCTCCGGGAGCTGCCCCAGCCTCTGGTGCCACC...GAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACGGTGGCACCAGAGGCTaGGGCAGCTCCCGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SLSSLEKLPHPSQHLKSHGGTRG*GSSRRK
Trigger: TTTTCTCCGGGAGCTGCCCCAGCCTCTGGTGCCACC...GTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CTGGGTCAGATGTCTCCTGCTCTGGCCGAAACAGGGTTGGTCCAAACACAATTCAGCAGGAGTTGGTCCTaGGTAGTGGTGGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGQMSPALAETGLVQTQFSRSWS*VVVGVW
Trigger: CCAGACTCCCACCACTACCCAGGACCAACTCCTGCT...GAATTGTGTTTGGACCAACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS-3UTR TCA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTTGCTCCGAGCTAGCCTaGGCCCTGCTTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLCSELA*ALLGRA
Trigger: GGCCCTCCCAAGCAGGGCTCAGGCTAGCTCGGAGCA...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCGATCCAGCCGCTCGATaGCAGTCCGCAGCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: EQEEKQGLIHSLSSLEKLDPAAR*QSAARG
Trigger: ACCGCGCGCTGCGGACTGTCATCGAGCGGCTGGATC...GAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GCTGGGTCAGATGTCTCCTGCTCTGGCCGAAACAGGGTTGGTCCAAACACAATTGCGGTCTCTTCGCGATaGGCCGCTTTAGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: AGSDVSCSGRNRVGPNTIAVSSR*AALVCC
Trigger: GCAACAAACTAAAGCGGCTCATCGCGAAGAGACCGC...AATTGTGTTTGGACCAACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTGGTGAGGATCGGTaGCAGGTTTTGGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GVNPLTFLFREAPSPIPTPGEDR*QVLGAE
Trigger: CTCAGCCCCCAAAACCTGTCACCGATCCTCACCAGG...TGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000424809.6
CDS-3UTR TCA 90 bp CTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGAGTGTTGCAGGGAGGTaGGGACGGGAGCCCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LFREAPSPIPTPQVTLMKSVAGR*GREPLS
Trigger: ACTCAAGGGCTCCCGTCCTCACCTCCCTGCAACACT...CTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424809.6
CDS-3UTR GCA 90 bp TTGTGGGGTGTCATGCGATTCTTATCTGAGTGTGCTATCACCCTGCATAAATGCGCTGGGGGCCTGCTGTaGTGGCACTGGCTTCTGACG +
Preference number: 4 (lower is better)
Translates to: LWGVMRFLSECAITLHKCAGGLL*WHWLLT
Trigger: CGTCAGAAGCCAGTGCCAGCACAGCAGGCCCCCAGC...GCATTTATGCAGGGTGATAGCACACTCAGATAAGAATCGCATGACACCCCACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS-3UTR GCA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGCAGGGTTCGTCTCGCTaGGACTGCGGCGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGQGSSR*DCGAGA
Trigger: AGCCCCCGCGCCGCAGTCGCAGCGAGACGAACCCTG...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTCAGGGTTCGTCTCGCTaGGACTGCGGCGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSQGSSR*DCGAGA
Trigger: AGCCCCCGCGCCGCAGTCGCAGCGAGACGAACCCTG...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTGCTGGAGGGTCAAGCTaGGAGGTGCGTTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPAGGSS*EVRWLR
Trigger: CCTCAGCCAACGCACCTCGCAGCTTGACCCTCCAGC...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCGCTGGAGGGTCAAGCTaGGAGGTGCGTTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LIHSLSSLEKLPHPSQHLAGGSS*EVRWLR
Trigger: CCTCAGCCAACGCACCTCGCAGCTTGACCCTCCAGC...GAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGCTGGAGGGTCAAGCTaGGAGGTGCGTTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NPLTFLFREAPSPIPTPQAGGSS*EVRWLR
Trigger: CCTCAGCCAACGCACCTCGCAGCTTGACCCTCCAGC...TTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAAGAGGTCGAGGGGCCTaGAAGGCTGGAGGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: NPLTFLFREAPSPIPTPQRGRGA*KAGGSS
Trigger: GCTTGACCCTCCAGCCTTGCAGGCCCCTCGACCTCT...TTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTGGATGTGCAGGACGTTaGGGCGGCTGGACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: QEEKQGLIHSLSSLEKLPGCAGR*GGWTGG
Trigger: GCCACCTGTCCAGCCGCCGCAACGTCCTGCACATCC...AGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp ACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGGATGTGCAGGACGTTaGGGCGGCTGGACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: THPNTSSHTHEDRDSHLGGCAGR*GGWTGG
Trigger: GCCACCTGTCCAGCCGCCGCAACGTCCTGCACATCC...TCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACGTCTCGTGGTCCGACTaGAGCAGGAACTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHVSWSD*SRNSWP
Trigger: TGGCCACGAGTTCCTGCTGCAGTCGGACCACGAGAC...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCGTCTCGTGGTCCGACTaGAGCAGGAACTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: REAGVNPLTFLFREAPSPVSWSD*SRNSWP
Trigger: TGGCCACGAGTTCCTGCTGCAGTCGGACCACGAGAC...GGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCCTCCTCACTTCCTGTTaGCAACTTCCCGCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: REAGVNPLTFLFREAPSPLLTSC*QLPASP
Trigger: GGGGGAGGCGGGAAGTTGGCAACAGGAAGTGAGGAG...GGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430041.6
CDS-3UTR CCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGAGCCTGAGCCCTGCTTaGGAGGGCCTGAGACAACTC +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIESLSPA*EGLRQL
Trigger: GAGTTGTCTCAGGCCCTCCCAAGCAGGGCTCAGGCT...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACAGCTGCGAGGTGCGTTaGCTGAGGCTGAGTGAACCC +
Preference number: 4 (lower is better)
Translates to: SLSSLEKLPHPSQHLKSHSCEVR*LRLSEP
Trigger: GGGTTCACTCAGCCTCAGCCAACGCACCTCGCAGCT...GTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAAGCTGCGAGGTGCGTTaGCTGAGGCTGAGTGAACCC +
Preference number: 4 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETSCEVR*LRLSEP
Trigger: GGGTTCACTCAGCCTCAGCCAACGCACCTCGCAGCT...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGAGGGGCCTGCAAGGCTaGAGGGTCAAGCTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWERGLQG*RVKLRG
Trigger: ACCTCGCAGCTTGACCCTCCAGCCTTGCAGGCCCCT...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGTGCAGCAGGAACTCGTaGCCAGGGATCGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: LFREAPSPIPTPQVTLMKCSRNS*PGIVRM
Trigger: CATCCGCACGATCCCTGGCCACGAGTTCCTGCTGCA...CTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCCGCAGCTCTGTCTCGTaGTCCGACTGCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TFLFREAPSPIPTPQVTLRSSVS*SDCSRN
Trigger: GTTCCTGCTGCAGTCGGACCACGAGACAGAGCTGCG...GAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTGGTGGCACCAGAGGCTaGGGCAGCTCCCGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPGGTRG*GSSRRK
Trigger: TTTTCTCCGGGAGCTGCCCCAGCCTCTGGTGCCACC...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCGGTGGCACCAGAGGCTaGGGCAGCTCCCGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: LIHSLSSLEKLPHPSQHLGGTRG*GSSRRK
Trigger: TTTTCTCCGGGAGCTGCCCCAGCCTCTGGTGCCACC...GAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp ATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTTGCTCCGAGCTAGCCTaGGCCCTGCTTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: IPTPQVTLMKIETVIWEICSELA*ALLGRA
Trigger: GGCCCTCCCAAGCAGGGCTCAGGCTAGCTCGGAGCA...AATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTGGCTGAGGCTGAGTaGACCCTGTGGGTCAAGCGG +
Preference number: 4 (lower is better)
Translates to: EHQPLTTRDDRKYVFSSSLAEAE*TLWVKR
Trigger: CCGCTTGACCCACAGGGTTCACTCAGCCTCAGCCAA...GGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp TTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAACCTCCCATCGGAGGTaGCCGCACGCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: FREAPSPIPTPQVTLMKITSHRR*PHALCP
Trigger: TGGACAGAGAGCGTGCGGTCACCTCCGATGGGAGGT...TATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGGCTTCAGGGCTCCGGTaGCCACATGAATGTCATCCC +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIEASGLR*PHECHP
Trigger: GGGATGACATTCATGTGGTCACCGGAGCCCTGAAGC...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTTTGGGGTCCAGGTGCTaGTCCCAGGCATCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QEEKQGLIHSLSSLEKLPLGSRC*SQASSL
Trigger: GAGGCTGGATGCCTGGGAGCAGCACCTGGACCCCAA...AGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp ACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTTGGGGTCCAGGTGCTaGTCCCAGGCATCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TEHQPLTTRDDRKYVFSSLGSRC*SQASSL
Trigger: GAGGCTGGATGCCTGGGAGCAGCACCTGGACCCCAA...AGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTGGATGTGCAGGACGTTaGGGCGGCTGGACAGGTGGC +
Preference number: 4 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLGCAGR*GGWTGG
Trigger: GCCACCTGTCCAGCCGCCGCAACGTCCTGCACATCC...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp ATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAGTCCGCAGCGCGCGGTaGCAGGCTCGCAGCTCTGTC +
Preference number: 4 (lower is better)
Translates to: IIMLGRNDNREQEEKQGLVRSAR*QARSSV
Trigger: GACAGAGCTGCGAGCCTGGCACCGCGCGCTGCGGAC...TAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATCAGCCGCTCACCCGATAAATaGCATCCACATCTAGACCTC +
Preference number: 4 (lower is better)
Translates to: LLPSLHQGKRLVKLVSISRSPDK*HPHLDL
Trigger: GAGGTCTAGATGTGGATGGCATTTATCGGGTGAGCG...GCTGATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGAAGCTTCTGGACCACTaGCAAGTTCCCGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIEKLLDH*QVPAHP
Trigger: CGGGTGAGCGGGAACTTGGCAGTGGTCCAGAAGCTT...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCGGGTCAGATGTCTCCTaGTCTGGCCGAAACAGGGTT +
Preference number: 4 (lower is better)
Translates to: APSPIPTPQVTLMKIETVGSDVS*SGRNRV
Trigger: AACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCC...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCGTAGAGAGCATGGGCTaGTGGGTCAGATGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: APSPIPTPQVTLMKIETVVESMG*WVRCLL
Trigger: CAGGAGACATCTGACCCAGCAGCCCATGCTCTCTAC...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp TTTTCTCTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCCTCTTCTTCCTTCCCTaGATCAGGGGAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FSLLPSLHQGKRLVKLVSLFFLP*IRGRGW
Trigger: CCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGAG...GCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TTTTCTCTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCTTCAGGAGCAGGAGTTaGTCCTGGGTAGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: FSLLPSLHQGKRLVKLVSFRSRS*SWVVVG
Trigger: TCCCACCACTACCCAGGACCAACTCCTGCTCCTGAA...GCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGAGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS-3UTR CCA 90 bp AATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAATCTGTGTCCCCTCCATaGAGCCAGGGTTCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: NPLTFLFREAPSPIPTPQSVSPP*SQGSSR
Trigger: GCGAGACGAACCCTGGCTCCATGGAGGGGACACAGA...TTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATGGGCGCTGTCGGCGGTaGCTCTCGGTAGAACACCAG +
Preference number: 4 (lower is better)
Translates to: HPNTSSHTHEDRDSHLGDGRCRR*LSVEHQ
Trigger: CTGGTGTTCTACCGAGAGCCACCGCCGACAGCGCCC...ATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCAAAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTGGGCGCTGTCGGCGGTaGCTCTCGGTAGAACACCAG +
Preference number: 4 (lower is better)
Translates to: SKQNTSLSPPEMTGNMFSGRCRR*LSVEHQ
Trigger: CTGGTGTTCTACCGAGAGCCACCGCCGACAGCGCCC...AGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGTGCAGCAGGAACTCGTaGCCAGGGATCGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWECSRNS*PGIVRM
Trigger: CATCCGCACGATCCCTGGCCACGAGTTCCTGCTGCA...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTTGGCAGCCGAACACCTaGTCTCGGAGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLWQPNT*SRSRPR
Trigger: GCGGGGTCTGCTCCGAGACCAGGTGTTCGGCTGCCA...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCAGAGCCGCAAAAAGCTaGGCACCGTGTCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: REAGVNPLTFLFREAPSPRAAKS*APCLLP
Trigger: GGGAAGGAGACACGGTGCCCAGCTTTTTGCGGCTCT...GGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp CTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATCAGCCCGACCTTCTTGTCCTaGCTGTTCTGGGAACACATA +
Preference number: 4 (lower is better)
Translates to: LLPSLHQGKRLVKLVSISPTFLS*LFWEHI
Trigger: TATGTGTTCCCAGAACAGCCAGGACAAGAAGGTCGG...GCTGATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp ACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCTCCTCCAGGGAACCATaGAACAACTTCGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TFLFREAPSPIPTPQVTLSSREP*NNFGPG
Trigger: TCCTGGGCCGAAGTTGTTTCATGGTTCCCTGGAGGA...GAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp TTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCATTGGCTGAGGCTGAGTaGACCCTGTGGGTCAAGCGG +
Preference number: 4 (lower is better)
Translates to: LGRNDNREQEEKQGLIHSLAEAE*TLWVKR
Trigger: CCGCTTGACCCACAGGGTTCACTCAGCCTCAGCCAA...TGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp ACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGATTGGCTGAGGCTGAGTaGACCCTGTGGGTCAAGCGG +
Preference number: 4 (lower is better)
Translates to: THPNTSSHTHEDRDSHLGLAEAE*TLWVKR
Trigger: CCGCTTGACCCACAGGGTTCACTCAGCCTCAGCCAA...TCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATACCTCCCATCGGAGGTaGCCGCACGCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: HPNTSSHTHEDRDSHLGDTSHRR*PHALCP
Trigger: TGGACAGAGAGCGTGCGGTCACCTCCGATGGGAGGT...ATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGGCTTCAGGGCTCCGGTaGCCACATGAATGTCATCCC +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWEASGLR*PHECHP
Trigger: GGGATGACATTCATGTGGTCACCGGAGCCCTGAAGC...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACAGAGAGGCACTGCTCTaGTTCGGAGAGTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHREALL*FGECLS
Trigger: GGACAAGCACTCTCCGAATCAGAGCAGTGCCTCTCT...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550399.5
CDS-3UTR GCA 90 bp TCAAAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTAGAGGTCGAGGGGCCTaGAAGGCTGGAGGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: SKQNTSLSPPEMTGNMFSRGRGA*KAGGSS
Trigger: GCTTGACCCTCCAGCCTTGCAGGCCCCTCGACCTCT...AGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGTCTCGTGGTCCGACTaGAGCAGGAACTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FREAPSPIPTPQVTLMKIVSWSD*SRNSWP
Trigger: TGGCCACGAGTTCCTGCTGCAGTCGGACCACGAGAC...TATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp ACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGTCTCGTGGTCCGACTaGAGCAGGAACTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: THPNTSSHTHEDRDSHLGVSWSD*SRNSWP
Trigger: TGGCCACGAGTTCCTGCTGCAGTCGGACCACGAGAC...TCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGCTTCTGGACCACTaGCAAGTTCCCGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: LIHSLSSLEKLPHPSQHLKLLDH*QVPAHP
Trigger: CGGGTGAGCGGGAACTTGGCAGTGGTCCAGAAGCTT...GAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGAAGCTTCTGGACCACTaGCAAGTTCCCGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWEKLLDH*QVPAHP
Trigger: CGGGTGAGCGGGAACTTGGCAGTGGTCCAGAAGCTT...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGGGGTCAGATGTCTCCTaGTCTGGCCGAAACAGGGTT +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIEGSDVS*SGRNRV
Trigger: AACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCC...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACGTAGAGAGCATGGGCTaGTGGGTCAGATGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHVESMG*WVRCLL
Trigger: CAGGAGACATCTGACCCAGCAGCCCATGCTCTCTAC...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGCTCTTCTTCCTTCCCTaGATCAGGGGAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIELFFLP*IRGRGW
Trigger: CCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGAG...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp AGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTGGAGTCCAGAGCAATTaGCCGGGGATGACGGTAGTT +
Preference number: 4 (lower is better)
Translates to: SSLTHPNTSSHTHEDRDSGVQSN*PGMTVV
Trigger: AACTACCGTCATCCCCGGCCAATTGCTCTGGACTCC...ACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACAGCCTGAGCCCTGCTTaGGAGGGCCTGAGACAACTC +
Preference number: 4 (lower is better)
Translates to: MLGRNDNREQEEKQGLIHSLSPA*EGLRQL
Trigger: GAGTTGTCTCAGGCCCTCCCAAGCAGGGCTCAGGCT...GTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTAGCCTGAGCCCTGCTTaGGAGGGCCTGAGACAACTC +
Preference number: 4 (lower is better)
Translates to: TEHQPLTTRDDRKYVFSSSLSPA*EGLRQL
Trigger: GAGTTGTCTCAGGCCCTCCCAAGCAGGGCTCAGGCT...AGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTAGCCTGAGCCCTGCTTaGGAGGGCCTGAGACAACTC +
Preference number: 4 (lower is better)
Translates to: QEEKQGLIHSLSSLEKLPSLSPA*EGLRQL
Trigger: GAGTTGTCTCAGGCCCTCCCAAGCAGGGCTCAGGCT...AGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGCCGCTTGGTCCTTCCTaGAAAGGCTTCAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LFREAPSPIPTPQVTLMKPLGPS*KGFRRL
Trigger: CAGCCTTCTGAAGCCTTTCCAGGAAGGACCAAGCGG...CTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCCGCTTGGTCCTTCCTaGAAAGGCTTCAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHPLGPS*KGFRRL
Trigger: CAGCCTTCTGAAGCCTTTCCAGGAAGGACCAAGCGG...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCGACGGCAAGTCTTCCTaGGAGAGGGATCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: TFLFREAPSPIPTPQVTLDGKSS*ERDLPL
Trigger: AAGCGGAAGATCCCTCTCCCAGGAAGACTTGCCGTC...GAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCCTGCTGTGCTGGCACTaGCTTCTGACGGCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: REAGVNPLTFLFREAPSPLLCWH*LLTASL
Trigger: AAGACTTGCCGTCAGAAGCCAGTGCCAGCACAGCAG...GGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGGGGGGCCTGCTGTGCTaGCACTGGCTTCTGACGGCA +
Preference number: 4 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGGGLLC*HWLLTA
Trigger: TGCCGTCAGAAGCCAGTGCCAGCACAGCAGGCCCCC...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
52% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGTCTGTGTCCCCTCCATaGAGCCAGGGTTCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: SPIPTPQVTLMKIETVIWSVSPP*SQGSSR
Trigger: GCGAGACGAACCCTGGCTCCATGGAGGGGACACAGA...CCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGTGGGTCAAGCGGTTCTaGGGTCCCTGTGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: LFREAPSPIPTPQVTLMKWVKRF*GPCVRS
Trigger: AGATCTGACACAGGGACCCCAGAACCGCTTGACCCA...CTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCTGGGTCAAGCGGTTCTaGGGTCCCTGTGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: KQGLIHSLSSLEKLPHPSWVKRF*GPCVRS
Trigger: AGATCTGACACAGGGACCCCAGAACCGCTTGACCCA...GGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCGGACGTTGCGGCGGCTaGACAGGTGGCGGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: LYVLLCWGGMITGNKKRSGRCGG*TGGGRA
Trigger: CGCACGGCCGCCACCTGTCCAGCCGCCGCAACGTCC...GCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACGCAGCTCTGTCTCGTaGTCCGACTGCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGRNDNREQEEKQGLIHSRSSVS*SDCSRN
Trigger: GTTCCTGCTGCAGTCGGACCACGAGACAGAGCTGCG...TGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCCAGAGTGATTCCAACTaGCAGCCGAACACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: APSPIPTPQVTLMKIETVQSDSN*QPNTWS
Trigger: AGACCAGGTGTTCGGCTGCCAGTTGGAATCACTCTG...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAAGTGTCTCCTTCCCGCTaGCAGAGTGATTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: QGLIHSLSSLEKLPHPSQVSPSR*QSDSNW
Trigger: CCAGTTGGAATCACTCTGCCAGCGGGAAGGAGACAC...TTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTAGAGCCGCAAAAAGCTaGGCACCGTGTCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VNPLTFLFREAPSPIPTPRAAKS*APCLLP
Trigger: GGGAAGGAGACACGGTGCCCAGCTTTTTGCGGCTCT...AGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GCTGGGTCAGATGTCTCCTGCTCTGGCCGAAACAGGGTTGGTCCAAACACAATTTTGTCCTGGCTGTTCTaGGAACACATACCTCCCATC +
Preference number: 4 (lower is better)
Translates to: AGSDVSCSGRNRVGPNTILSWLF*EHIPPI
Trigger: GATGGGAGGTATGTGTTCCCAGAACAGCCAGGACAA...AATTGTGTTTGGACCAACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGAGATGTCTCCTGCTCTaGCCGAAACAGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LFREAPSPIPTPQVTLMKRCLLL*PKQGWS
Trigger: GGACCAACCCTGTTTCGGCCAGAGCAGGAGACATCT...CTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGAGATGTCTCCTGCTCTaGCCGAAACAGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIERCLLL*PKQGWS
Trigger: GGACCAACCCTGTTTCGGCCAGAGCAGGAGACATCT...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp CTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGCAATGTGAGGCTTTCTaGGTGTGCTGGCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: LFREAPSPIPTPQVTLMKQCEAF*VCWPSY
Trigger: GTAGCTGGGCCAGCACACCCAGAAAGCCTCACATTG...CTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS-3UTR CCA 90 bp GAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCGGTGACCCAGGGTACTaGGGGAGAAACCTCAGGCCC +
Preference number: 4 (lower is better)
Translates to: EQEEKQGLIHSLSSLEKLGDPGY*GRNLRP
Trigger: GGGCCTGAGGTTTCTCCCCCAGTACCCTGGGTCACC...GAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430041.6
CDS-3UTR TCA 90 bp CCAAACACAATTCCCAGGTTGTGGGGTGTCATGCGATTCTTATCTGAGTGTGCTTCCTCCAGGGAACCATaGAACAACTTCGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PNTIPRLWGVMRFLSECASSREP*NNFGPG
Trigger: TCCTGGGCCGAAGTTGTTTCATGGTTCCCTGGAGGA...AGCACACTCAGATAAGAATCGCATGACACCCCACAACCTGGGAATTGTGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp AGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCCTGCTTGGGAGGGCCTaGGACAACTCCTCCAGGGAA +
Preference number: 4 (lower is better)
Translates to: RNDNREQEEKQGLIHSLSLLGRA*DNSSRE
Trigger: TTCCCTGGAGGAGTTGTCTCAGGCCCTCCCAAGCAG...GGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp AGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCCTGAAGCCCTTTGCCTaGGGTTGCAGGACATCATTG +
Preference number: 4 (lower is better)
Translates to: REAGVNPLTFLFREAPSPLKPFA*GCRTSL
Trigger: CAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAG...GGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAATCCCTGTGTCAGATCTaGAGCCCTTTGCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: QGLIHSLSSLEKLPHPSQSLCQI*SPLPEV
Trigger: AACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGA...TTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACATCCCTGTGTCAGATCTaGAGCCCTTTGCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETSLCQI*SPLPEV
Trigger: AACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGA...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp AGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCTCCCTGTGTCAGATCTaGAGCCCTTTGCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: REAGVNPLTFLFREAPSPSLCQI*SPLPEV
Trigger: AACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGA...GGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp AGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGTTGGCTGAGGCTGAGTaGACCCTGTGGGTCAAGCGG +
Preference number: 4 (lower is better)
Translates to: REQEEKQGLIHSLSSLEKLAEAE*TLWVKR
Trigger: CCGCTTGACCCACAGGGTTCACTCAGCCTCAGCCAA...CTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp AGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTTGGCTGAGGCTGAGTaGACCCTGTGGGTCAAGCGG +
Preference number: 4 (lower is better)
Translates to: RNDNREQEEKQGLIHSLSLAEAE*TLWVKR
Trigger: CCGCTTGACCCACAGGGTTCACTCAGCCTCAGCCAA...GGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp TTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCGCGGTCTCTTCGCGATaGGCCGCTTTAGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: LIHSLSSLEKLPHPSQHLAVSSR*AALVCC
Trigger: GCAACAAACTAAAGCGGCTCATCGCGAAGAGACCGC...GAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTACCTCCCATCGGAGGTaGCCGCACGCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VLLCWGGMITGNKKRSRGTSHRR*PHALCP
Trigger: TGGACAGAGAGCGTGCGGTCACCTCCGATGGGAGGT...ACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp TCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGCTTCAGGGCTCCGGTaGCCACATGAATGTCATCCC +
Preference number: 4 (lower is better)
Translates to: SPIPTPQVTLMKIETVIWASGLR*PHECHP
Trigger: GGGATGACATTCATGTGGTCACCGGAGCCCTGAAGC...CCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp ACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAAGAGAGGCACTGCTCTaGTTCGGAGAGTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: THPNTSSHTHEDRDSHLGREALL*FGECKG
Trigger: GCCCTTGCACTCTCCGAATCAGAGCAGTGCCTCTCT...TCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
CDS-3UTR TCA 90 bp AGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCGAGCAAACAGCCTGGTaGGGATCGGTGACAGGTTTT +
Preference number: 4 (lower is better)
Translates to: REAGVNPLTFLFREAPSPEQTAW*GSVTGF
Trigger: AAAACCTGTCACCGATCCTCACCAGGCTGTTTGCTC...GGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424809.6
CDS-3UTR TCA 90 bp CTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATCAGCATTAATTCTTGTATCTaGGAGAGGCACTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: LLPSLHQGKRLVKLVSISINSCI*ERHCKG
Trigger: GCCCTTGCAGTGCCTCTCTCAGATACAAGAATTAAT...GCTGATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS-3UTR GCA 90 bp TATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGAGGGGCTGGGGGCCTaGTGTGCTGGCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: YVLLCWGGMITGNKKRSREGLGA*CAGTGF
Trigger: GAAGCCAGTGCCAGCACAGCAGGCCCCCAGCCCCTC...CCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTGCTGGAGGGTCAAGCTaGGAGGTGCGTTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSAGGSS*EVRWLR
Trigger: CCTCAGCCAACGCACCTCGCAGCTTGACCCTCCAGC...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGAGAGGTCGAGGGGCCTaGAAGGCTGGAGGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGRGRGA*KAGGSS
Trigger: GCTTGACCCTCCAGCCTTGCAGGCCCCTCGACCTCT...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCGGGTCGTCCAGGAGCTaGGGCAGAGGTCGAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LYVLLCWGGMITGNKKRSGSSRS*GRGRGA
Trigger: GGCCCCTCGACCTCTGCCGCAGCTCCTGGACGACCC...GCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGTTGCGCACGCGGTTCTaGTCGGTGCCTTCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: YVLLCWGGMITGNKKRSRLRTRF*SVPSGP
Trigger: GGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAA...CCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTGCCGCTTTAGTTTGTTaGGCACGCGGTTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: NTSLSPPEMTGNMFSLLPAALVC*ARGSAR
Trigger: CCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGC...AGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGAGCAGACCCCGCTCCTaGAGGCTTTGTAAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: REQEEKQGLIHSLSSLEKSRPRS*RLCKGG
Trigger: ACCGCCCTTACAAAGCCTGCAGGAGCGGGGTCTGCT...CTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAGCAGACCCCGCTCCTaGAGGCTTTGTAAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: NREQEEKQGLIHSLSSLESRPRS*RLCKGG
Trigger: ACCGCCCTTACAAAGCCTGCAGGAGCGGGGTCTGCT...CTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCAAAGCTTCTGGACCACTaGCAAGTTCCCGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: LGRNDNREQEEKQGLIHSKLLDH*QVPAHP
Trigger: CGGGTGAGCGGGAACTTGGCAGTGGTCCAGAAGCTT...TGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp GTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCTCTTCTTCCTTCCCTaGATCAGGGGAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VNPLTFLFREAPSPIPTPLFFLP*IRGRGW
Trigger: CCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGAG...AGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGTTCAGGAGCAGGAGTTaGTCCTGGGTAGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWEFRSRS*SWVVVG
Trigger: TCCCACCACTACCCAGGACCAACTCCTGCTCCTGAA...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000550288.6
CDS-3UTR CCA 90 bp CTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATCAGCGACTCTGGGAAGGGATaGATTCCTCTATCATATAGG +
Preference number: 4 (lower is better)
Translates to: LLPSLHQGKRLVKLVSISDSGKG*IPLSYR
Trigger: CCTATATGATAGAGGAATCCATCCCTTCCCAGAGTC...GCTGATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTGGGGATGACGGTAGTTaGACTCTGGGAAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPGDDGS*TLGRDG
Trigger: TCCATCCCTTCCCAGAGTCCAACTACCGTCATCCCC...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTCTGTGTCCCCTCCATaGAGCCAGGGTTCGTCTCGC +
Preference number: 4 (lower is better)
Translates to: HPNTSSHTHEDRDSHLGDSVSPP*SQGSSR
Trigger: GCGAGACGAACCCTGGCTCCATGGAGGGGACACAGA...ATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTTGGGTCAAGCGGTTCTaGGGTCCCTGTGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPWVKRF*GPCVRS
Trigger: AGATCTGACACAGGGACCCCAGAACCGCTTGACCCA...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCAGCTGCGAGGTGCGTTaGCTGAGGCTGAGTGAACCC +
Preference number: 4 (lower is better)
Translates to: RNDNREQEEKQGLIHSLSSCEVR*LRLSEP
Trigger: GGGTTCACTCAGCCTCAGCCAACGCACCTCGCAGCT...GGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACGACTTTTCCACCTCATaGGGGTCGTCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: MLGRNDNREQEEKQGLIHDFSTS*GSSRSC
Trigger: GCAGCTCCTGGACGACCCCCATGAGGTGGAAAAGTC...GTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTGCAGCAGGAACTCGTaGCCAGGGATCGTGCGGATG +
Preference number: 4 (lower is better)
Translates to: HPNTSSHTHEDRDSHLGDCSRNS*PGIVRM
Trigger: CATCCGCACGATCCCTGGCCACGAGTTCCTGCTGCA...ATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGCGCAGCTCTGTCTCGTaGTCCGACTGCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: NREQEEKQGLIHSLSSLERSSVS*SDCSRN
Trigger: GTTCCTGCTGCAGTCGGACCACGAGACAGAGCTGCG...CTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTGTGTCTCCTTCCCGCTaGCAGAGTGATTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: VNPLTFLFREAPSPIPTPVSPSR*QSDSNW
Trigger: CCAGTTGGAATCACTCTGCCAGCGGGAAGGAGACAC...AGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCAGAAAGCGAAGCTTCTaGACCACTGCCAAGTTCCCG +
Preference number: 4 (lower is better)
Translates to: TFLFREAPSPIPTPQVTLRKRSF*TTAKFP
Trigger: CGGGAACTTGGCAGTGGTCCAGAAGCTTCGCTTTCT...GAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGAGAAAGCGAAGCTTCTaGACCACTGCCAAGTTCCCG +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIERKRSF*TTAKFP
Trigger: CGGGAACTTGGCAGTGGTCCAGAAGCTTCGCTTTCT...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp TTTTCTCTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCTTGTCCTGGCTGTTCTaGGAACACATACCTCCCATC +
Preference number: 4 (lower is better)
Translates to: FSLLPSLHQGKRLVKLVSLSWLF*EHIPPI
Trigger: GATGGGAGGTATGTGTTCCCAGAACAGCCAGGACAA...GCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCCCGACCTTCTTGTCCTaGCTGTTCTGGGAACACATA +
Preference number: 4 (lower is better)
Translates to: APSPIPTPQVTLMKIETVPTFLS*LFWEHI
Trigger: TATGTGTTCCCAGAACAGCCAGGACAAGAAGGTCGG...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACGTAGTCCCAGCTACTTaGGAGCCTGAGGCACAAGAA +
Preference number: 4 (lower is better)
Translates to: SLSSLEKLPHPSQHLKSHVVPAT*EPEAQE
Trigger: TTCTTGTGCCTCAGGCTCCCAAGTAGCTGGGACTAC...GTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS-3UTR TCA 90 bp ATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGTGCTCCGAGCTAGCCTaGGCCCTGCTTGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: MPLYVLLCWGGMITGNKKCSELA*ALLGRA
Trigger: GGCCCTCCCAAGCAGGGCTCAGGCTAGCTCGGAGCA...CTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCTCAGATTGTCAGTGCTaGCGCTCCTACACATTTTGC +
Preference number: 4 (lower is better)
Translates to: APSPIPTPQVTLMKIETVSDCQC*RSYTFC
Trigger: GCAAAATGTGTAGGAGCGTCAGCACTGACAATCTGA...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGCTGAAGCCCTTTGCCTaGGGTTGCAGGACATCATTG +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWELKPFA*GCRTSL
Trigger: CAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAG...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGATCCAGCCGCTCGATaGCAGTCCGCAGCGCGCGGT +
Preference number: 4 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQDPAAR*QSAARG
Trigger: ACCGCGCGCTGCGGACTGTCATCGAGCGGCTGGATC...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCTTCCCGCTGGCAGAGTaGTTCCAACTGGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: EQEEKQGLIHSLSSLEKLFPLAE*FQLAAE
Trigger: TTCGGCTGCCAGTTGGAATCACTCTGCCAGCGGGAA...GAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCGCTTCAGGGCTCCGGTaGCCACATGAATGTCATCCC +
Preference number: 4 (lower is better)
Translates to: EQEEKQGLIHSLSSLEKLASGLR*PHECHP
Trigger: GGGATGACATTCATGTGGTCACCGGAGCCCTGAAGC...GAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATAGAGAGGCACTGCTCTaGTTCGGAGAGTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: HPNTSSHTHEDRDSHLGDREALL*FGECKG
Trigger: GCCCTTGCACTCTCCGAATCAGAGCAGTGCCTCTCT...ATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
CDS-3UTR TCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCCATGCGATTCTTATCTaGGTGTGCTATCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: APSPIPTPQVTLMKIETVHAILI*VCYHPA
Trigger: TGCAGGGTGATAGCACACTCAGATAAGAATCGCATG...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp GAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCCACCTGCTGGCCATCTaGCCCAGTATAAGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: EHQPLTTRDDRKYVFSSSHLLAI*PSISKG
Trigger: GCCTTTACTTATACTGGGGCAGATGGCCAGCAGGTG...GGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp GAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCACCTGCTGGCCATCTaGCCCAGTATAAGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: EEKQGLIHSLSSLEKLPHHLLAI*PSISKG
Trigger: GCCTTTACTTATACTGGGGCAGATGGCCAGCAGGTG...GTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAGAGGGGCTGGGGGCCTaGTGTGCTGGCACTGGCTTC +
Preference number: 4 (lower is better)
Translates to: PLYVLLCWGGMITGNKKREGLGA*CAGTGF
Trigger: GAAGCCAGTGCCAGCACAGCAGGCCCCCAGCCCCTC...TCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp GGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACAGGGGCTTCCAGGACTTaGAGCCAGTCAGTGAATTTA +
Preference number: 4 (lower is better)
Translates to: GVNPLTFLFREAPSPIPTGASRT*SQSVNL
Trigger: TAAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCC...TGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGGTCTCGTGGTCCGACTaGAGCAGGAACTCGTGGCCA +
Preference number: 4 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGVSWSD*SRNSWP
Trigger: TGGCCACGAGTTCCTGCTGCAGTCGGACCACGAGAC...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGACGCGGTTCTGCTCGGTaGCTTCGGGCCCCCGAATGG +
Preference number: 4 (lower is better)
Translates to: PLYVLLCWGGMITGNKKRRGSAR*LRAPEW
Trigger: CCATTCGGGGGCCCGAAGGCACCGAGCAGAACCGCG...TCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGATTGCGCACGCGGTTCTaGTCGGTGCCTTCGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PLYVLLCWGGMITGNKKRLRTRF*SVPSGP
Trigger: GGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAA...TCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp GAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCGCCGCTTTAGTTTGTTaGGCACGCGGTTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: EQEEKQGLIHSLSSLEKLAALVC*ARGSAR
Trigger: CCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGC...GAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTAGCAGACCCCGCTCCTaGAGGCTTTGTAAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSSRPRS*RLCKGG
Trigger: ACCGCCCTTACAAAGCCTGCAGGAGCGGGGTCTGCT...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACATATCCACAGCAGCAATaGAGAGCCGCAAAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETYPQQQ*RAAKSW
Trigger: CCAGCTTTTTGCGGCTCTGCATTGCTGCTGTGGATA...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACTATCCACAGCAGCAATaGAGAGCCGCAAAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHYPQQQ*RAAKSW
Trigger: CCAGCTTTTTGCGGCTCTGCATTGCTGCTGTGGATA...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp CTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGTATCCACAGCAGCAATaGAGAGCCGCAAAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LFREAPSPIPTPQVTLMKYPQQQ*RAAKSW
Trigger: CCAGCTTTTTGCGGCTCTGCATTGCTGCTGTGGATA...CTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACACGCTCACCCGATAAATaGCATCCACATCTAGACCTC +
Preference number: 4 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETRSPDK*HPHLDL
Trigger: GAGGTCTAGATGTGGATGGCATTTATCGGGTGAGCG...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp TTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGTAGAGAGCATGGGCTaGTGGGTCAGATGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FREAPSPIPTPQVTLMKIVESMG*WVRCLL
Trigger: CAGGAGACATCTGACCCAGCAGCCCATGCTCTCTAC...TATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp AGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACTCTTCTTCCTTCCCTaGATCAGGGGAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: RREAGVNPLTFLFREAPSLFFLP*IRGRGW
Trigger: CCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGAG...TGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp ACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGACTCTTCTTCCTTCCCTaGATCAGGGGAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: THPNTSSHTHEDRDSHLGLFFLP*IRGRGW
Trigger: CCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGAG...TCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGTACCACCACCTCCTCTaGAGTCCCCATCTGTTGCTT +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWEYHHLL*SPHLLL
Trigger: AAGCAACAGATGGGGACTGCAGAGGAGGTGGTGGTA...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393797.7
CDS-3UTR CCA 90 bp ATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACAGCAGGAGTTGGTCCTaGGTAGTGGTGGGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: MLGRNDNREQEEKQGLIHSRSWS*VVVGVL
Trigger: CAAGACTCCCACCACTACCCAGGACCAACTCCTGCT...GTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393791.8
CDS-3UTR CCA 90 bp AGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCATTCAGGAGCAGGAGTTaGTCCTGGGTAGTGGTGGGA +
Preference number: 4 (lower is better)
Translates to: RREAGVNPLTFLFREAPSFRSRS*SWVVVG
Trigger: TCCCACCACTACCCAGGACCAACTCCTGCTCCTGAA...TGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000550288.6
CDS-3UTR CCA 90 bp AGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTAGCACTGTCACCTTGTaGGGCCCATCAGAAGATTCA +
Preference number: 4 (lower is better)
Translates to: SSLTHPNTSSHTHEDRDSSTVTL*GPSEDS
Trigger: TGAATCTTCTGATGGGCCCCACAAGGTGACAGTGCT...ACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000550288.6
CDS-3UTR CCA 90 bp CAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAAACCACCAGTCGGAGTTaGTCTTTCGAAGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: QGLIHSLSSLEKLPHPSQTTSRS*SFEAVG
Trigger: TCCTACTGCTTCGAAAGACCAACTCCGACTGGTGGT...TTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTACCACCAGTCGGAGTTaGTCTTTCGAAGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: SSLTHPNTSSHTHEDRDSTTSRS*SFEAVG
Trigger: TCCTACTGCTTCGAAAGACCAACTCCGACTGGTGGT...ACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCTATCATATAGGCTGCTaGGACGAAGATGGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: APSPIPTPQVTLMKIETVYHIGC*DEDGSR
Trigger: TCTCGACCCATCTTCGTCCCAGCAGCCTATATGATA...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAAACGGTAGTTGGACTCTaGGAAGGGATGGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: QGLIHSLSSLEKLPHPSQTVVGL*EGMDSS
Trigger: AGAGGAATCCATCCCTTCCCAGAGTCCAACTACCGT...TTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGGGGATGACGGTAGTTaGACTCTGGGAAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: SPIPTPQVTLMKIETVIWGDDGS*TLGRDG
Trigger: TCCATCCCTTCCCAGAGTCCAACTACCGTCATCCCC...CCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTGGAGTCCAGAGCAATTaGCCGGGGATGACGGTAGTT +
Preference number: 4 (lower is better)
Translates to: TEHQPLTTRDDRKYVFSSGVQSN*PGMTVV
Trigger: AACTACCGTCATCCCCGGCCAATTGCTCTGGACTCC...AGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCAGGAGTCCAGAGCAATTaGCCGGGGATGACGGTAGTT +
Preference number: 4 (lower is better)
Translates to: LGRNDNREQEEKQGLIHSGVQSN*PGMTVV
Trigger: AACTACCGTCATCCCCGGCCAATTGCTCTGGACTCC...TGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCATTTTGCGGGGAAGTaGAGGAGGCTGCTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: REQEEKQGLIHSLSSLEKHFAGK*RRLLRA
Trigger: AGCTCGGAGCAGCCTCCTCCACTTCCCCGCAAAATG...CTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATCATTTTGCGGGGAAGTaGAGGAGGCTGCTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: HPNTSSHTHEDRDSHLGDHFAGK*RRLLRA
Trigger: AGCTCGGAGCAGCCTCCTCCACTTCCCCGCAAAATG...ATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTCCGCTTGGTCCTTCCTaGAAAGGCTTCAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: NTSLSPPEMTGNMFSLLPPLGPS*KGFRRL
Trigger: CAGCCTTCTGAAGCCTTTCCAGGAAGGACCAAGCGG...AGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCGAGGGATCTTCCGCTTaGTCCTTCCTGGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: EHQPLTTRDDRKYVFSSSEGSSA*SFLERL
Trigger: AAGCCTTTCCAGGAAGGACCAAGCGGAAGATCCCTC...GGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGCTGCTGTGCTGGCACTaGCTTCTGACGGCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: LTHPNTSSHTHEDRDSHLLLCWH*LLTASL
Trigger: AAGACTTGCCGTCAGAAGCCAGTGCCAGCACAGCAG...CAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCAAAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTGACTTTTCCACCTCATaGGGGTCGTCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SKQNTSLSPPEMTGNMFSDFSTS*GSSRSC
Trigger: GCAGCTCCTGGACGACCCCCATGAGGTGGAAAAGTC...AGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGCGCAGCTCTGTCTCGTaGTCCGACTGCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGRSSVS*SDCSRN
Trigger: GTTCCTGCTGCAGTCGGACCACGAGACAGAGCTGCG...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGTGGCAGCCGAACACCTaGTCTCGGAGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: YVLLCWGGMITGNKKRSRWQPNT*SRSRPR
Trigger: GCGGGGTCTGCTCCGAGACCAGGTGTTCGGCTGCCA...CCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGTGGCAGCCGAACACCTaGTCTCGGAGCAGACCCCGC +
Preference number: 4 (lower is better)
Translates to: ATLCIIMLGRNDNREQEEWQPNT*SRSRPR
Trigger: GCGGGGTCTGCTCCGAGACCAGGTGTTCGGCTGCCA...CTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGCAGAGTGATTCCAACTaGCAGCCGAACACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWEQSDSN*QPNTWS
Trigger: AGACCAGGTGTTCGGCTGCCAGTTGGAATCACTCTG...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CCAAACACAATTCCCAGGTTGTGGGGTGTCATGCGATTCTTATCTGAGTGTGCTCAGAGTGATTCCAACTaGCAGCCGAACACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: PNTIPRLWGVMRFLSECAQSDSN*QPNTWS
Trigger: AGACCAGGTGTTCGGCTGCCAGTTGGAATCACTCTG...AGCACACTCAGATAAGAATCGCATGACACCCCACAACCTGGGAATTGTGTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGTGTCTCCTTCCCGCTaGCAGAGTGATTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: LTHPNTSSHTHEDRDSHLVSPSR*QSDSNW
Trigger: CCAGTTGGAATCACTCTGCCAGCGGGAAGGAGACAC...CAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCAGAGCCGCAAAAAGCTaGGCACCGTGTCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: EQEEKQGLIHSLSSLEKLRAAKS*APCLLP
Trigger: GGGAAGGAGACACGGTGCCCAGCTTTTTGCGGCTCT...GAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp AGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCAGAGCCGCAAAAAGCTaGGCACCGTGTCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: RNDNREQEEKQGLIHSLSRAAKS*APCLLP
Trigger: GGGAAGGAGACACGGTGCCCAGCTTTTTGCGGCTCT...GGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACAGAAAGCGAAGCTTCTaGACCACTGCCAAGTTCCCG +
Preference number: 4 (lower is better)
Translates to: EEKQGLIHSLSSLEKLPHRKRSF*TTAKFP
Trigger: CGGGAACTTGGCAGTGGTCCAGAAGCTTCGCTTTCT...GTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACACCGACCTTCTTGTCCTaGCTGTTCTGGGAACACATA +
Preference number: 4 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETPTFLS*LFWEHI
Trigger: TATGTGTTCCCAGAACAGCCAGGACAAGAAGGTCGG...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATCAGACAATTCCCAGGTTGTaGGGTGTCATGCGATTCTTA +
Preference number: 4 (lower is better)
Translates to: SSSFPASGEEAGEVGEHQTIPRL*GVMRFL
Trigger: TAAGAATCGCATGACACCCCACAACCTGGGAATTGT...CTGATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCTGGCCGAAACAGGGTTaGTCCAAACACAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: REAGVNPLTFLFREAPSPWPKQG*SKHNSQ
Trigger: CTGGGAATTGTGTTTGGACCAACCCTGTTTCGGCCA...GGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp TCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGAGATGTCTCCTGCTCTaGCCGAAACAGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: SPIPTPQVTLMKIETVIWRCLLL*PKQGWS
Trigger: GGACCAACCCTGTTTCGGCCAGAGCAGGAGACATCT...CCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp ATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACAGATGTCTCCTGCTCTaGCCGAAACAGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: MLGRNDNREQEEKQGLIHRCLLL*PKQGWS
Trigger: GGACCAACCCTGTTTCGGCCAGAGCAGGAGACATCT...GTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCTCTCAGCCGATTGTTTaGGTGACTCTTAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: APSPIPTPQVTLMKIETVSQPIV*VTLRRF
Trigger: GAACCTCCTAAGAGTCACCCAAACAATCGGCTGAGA...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS-3UTR TCA 90 bp AAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCTTGCAGCCAGTCAGTaGATTTATGTAGAAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KQGLIHSLSSLEKLPHPSLAASQ*IYVEAA
Trigger: CGCTGCTTCTACATAAATTCACTGACTGGCTGCAAG...GGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACTTGCAGCCAGTCAGTaGATTTATGTAGAAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GVNPLTFLFREAPSPIPTLAASQ*IYVEAA
Trigger: CGCTGCTTCTACATAAATTCACTGACTGGCTGCAAG...TGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTTCCCTGTGTCAGATCTaGAGCCCTTTGCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: QEEKQGLIHSLSSLEKLPSLCQI*SPLPEV
Trigger: AACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGA...AGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGCAATCTTGGTCATGTTaGGCAGACCCGACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIEQSWSC*ADPTFP
Trigger: TGGAAAAGTCGGGTCTGCTCAACATGACCAAGATTG...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp AACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGGCGGTCTCTTCGCGATaGGCCGCTTTAGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: NREQEEKQGLIHSLSSLEAVSSR*AALVCC
Trigger: GCAACAAACTAAAGCGGCTCATCGCGAAGAGACCGC...CTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACAAGCCGATTGTTTGGGTaGCTCTTAGGAGGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GVNPLTFLFREAPSPIPTSRLFG*LLGGSL
Trigger: AAGAGAACCTCCTAAGAGTCACCCAAACAATCGGCT...TGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS-3UTR TCA 90 bp AGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTAGCCGATTGTTTGGGTaGCTCTTAGGAGGTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSLTHPNTSSHTHEDRDSSRLFG*LLGGSL
Trigger: AAGAGAACCTCCTAAGAGTCACCCAAACAATCGGCT...ACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS-3UTR TCA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTCCACTGCACAATGTaGGGCTTTCTGGGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLLHCTM*GFLGVL
Trigger: CAGCACACCCAGAAAGCCTCACATTGTGCAGTGGAG...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS-3UTR TCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGCATGCGATTCTTATCTaGGTGTGCTATCACCCAAGG +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIEHAILI*VCYHPR
Trigger: CCTTGGGTGATAGCACACTCAGATAAGAATCGCATG...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424809.6
CDS-3UTR TCA 90 bp TGTGGGGTGTCATGCGATTCTTATCTGAGTGTGCTATCACCCTGCATAAATGCTAGGCAGAGATTGCACTaGGCTGAGATCATGCCACTG +
Preference number: 4 (lower is better)
Translates to: CGVSCDSYLSVLSPCINARQRLH*AEIMPL
Trigger: CAGTGGCATGATCTCAGCTCAGTGCAATCTCTGCCT...AGCATTTATGCAGGGTGATAGCACACTCAGATAAGAATCGCATGACACCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS-3UTR GCA 90 bp CAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCTGCTGGCCATCTaGCCCAGTATAAGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: QEEKQGLIHSLSSLEKLPHLLAI*PSISKG
Trigger: GCCTTTACTTATACTGGGGCAGATGGCCAGCAGGTG...AGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGCTGGGGGCCTGCTGTaGTGGCACTGGCTTCTGACG +
Preference number: 4 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQAGGLL*WHWLLT
Trigger: CGTCAGAAGCCAGTGCCAGCACAGCAGGCCCCCAGC...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGGCCGCTTTAGTTTGTTaGGCACGCGGTTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGAALVC*ARGSAR
Trigger: CCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGC...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTCGCTCACCCGATAAATaGCATCCACATCTAGACCTC +
Preference number: 4 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPRSPDK*HPHLDL
Trigger: GAGGTCTAGATGTGGATGGCATTTATCGGGTGAGCG...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAATCACCCTGCATAAATaGTCCAGGAGGTACCGTAGA +
Preference number: 4 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETITLHK*SRRYRR
Trigger: TCTACGGTACCTCCTGGAGCATTTATGCAGGGTGAT...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp AAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCATCACCCTGCATAAATaGTCCAGGAGGTACCGTAGA +
Preference number: 4 (lower is better)
Translates to: KQGLIHSLSSLEKLPHPSITLHK*SRRYRR
Trigger: TCTACGGTACCTCCTGGAGCATTTATGCAGGGTGAT...GGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp ACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATCACCCTGCATAAATaGTCCAGGAGGTACCGTAGA +
Preference number: 4 (lower is better)
Translates to: TFLFREAPSPIPTPQVTLITLHK*SRRYRR
Trigger: TCTACGGTACCTCCTGGAGCATTTATGCAGGGTGAT...GAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp AAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCGGTTGTGGGGTGTCATaGGATTCTTATCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: KQGLIHSLSSLEKLPHPSGCGVS*DSYLSV
Trigger: CACACTCAGATAAGAATCGCATGACACCCCACAACC...GGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp TCAAAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTGGGTCAGATGTCTCCTaGTCTGGCCGAAACAGGGTT +
Preference number: 4 (lower is better)
Translates to: SKQNTSLSPPEMTGNMFSGSDVS*SGRNRV
Trigger: AACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCC...AGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTGTAGAGAGCATGGGCTaGTGGGTCAGATGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLVESMG*WVRCLL
Trigger: CAGGAGACATCTGACCCAGCAGCCCATGCTCTCTAC...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp GTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTTCTCTAGAGGAGACCTaGTGTAGCCTATCAGGCAAG +
Preference number: 4 (lower is better)
Translates to: VNPLTFLFREAPSPIPTPSLEET*CSLSGK
Trigger: CTTGCCTGATAGGCTACAGCAGGTCTCCTCTAGAGA...AGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430041.6
CDS-3UTR GCA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCCCACCCTCACATCCTaGAAGGTAAAAGAAGACAGA +
Preference number: 4 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHPTLTS*KVKEDR
Trigger: TCTGTCTTCTTTTACCTTGCAGGATGTGAGGGTGGG...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430041.6
CDS-3UTR GCA 90 bp TTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTGGGAGGCAGAGATTaGACTGAGCTGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: LGRNDNREQEEKQGLIHSLGGRD*TELRSC
Trigger: GCATGATCTCAGCTCAGTGCAATCTCTGCCTCCCAG...TGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS-3UTR CCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGACCACCAGTCGGAGTTaGTCTTTCGAAGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWETTSRS*SFEAVG
Trigger: TCCTACTGCTTCGAAAGACCAACTCCGACTGGTGGT...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCACGGTAGTTGGACTCTaGGAAGGGATGGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: EHQPLTTRDDRKYVFSSSTVVGL*EGMDSS
Trigger: AGAGGAATCCATCCCTTCCCAGAGTCCAACTACCGT...GGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCAAAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTGGGGATGACGGTAGTTaGACTCTGGGAAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: SKQNTSLSPPEMTGNMFSGDDGS*TLGRDG
Trigger: TCCATCCCTTCCCAGAGTCCAACTACCGTCATCCCC...AGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTCATTTTGCGGGGAAGTaGAGGAGGCTGCTCCGAGCT +
Preference number: 4 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSHFAGK*RRLLRA
Trigger: AGCTCGGAGCAGCCTCCTCCACTTCCCCGCAAAATG...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCAGAGGGATCTTCCGCTTaGTCCTTCCTGGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LGRNDNREQEEKQGLIHSEGSSA*SFLERL
Trigger: AAGCCTTTCCAGGAAGGACCAAGCGGAAGATCCCTC...TGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTGAGGGATCTTCCGCTTaGTCCTTCCTGGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: NTSLSPPEMTGNMFSLLPEGSSA*SFLERL
Trigger: AAGCCTTTCCAGGAAGGACCAAGCGGAAGATCCCTC...AGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCGACGGCAAGTCTTCCTaGGAGAGGGATCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: RNDNREQEEKQGLIHSLSDGKSS*ERDLPL
Trigger: AAGCGGAAGATCCCTCTCCCAGGAAGACTTGCCGTC...GGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGGACGGCAAGTCTTCCTaGGAGAGGGATCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: REQEEKQGLIHSLSSLEKDGKSS*ERDLPL
Trigger: AAGCGGAAGATCCCTCTCCCAGGAAGACTTGCCGTC...CTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTTGGGTCAAGCGGTTCTaGGGTCCCTGTGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLWVKRF*GPCVRS
Trigger: AGATCTGACACAGGGACCCCAGAACCGCTTGACCCA...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTGACTTTTCCACCTCATaGGGGTCGTCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSDFSTS*GSSRSC
Trigger: GCAGCTCCTGGACGACCCCCATGAGGTGGAAAAGTC...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGCGCTGTCGGCGGTaGCTCTCGGTAGAACACCAG +
Preference number: 4 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQGRCRR*LSVEHQ
Trigger: CTGGTGTTCTACCGAGAGCCACCGCCGACAGCGCCC...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGACAGAGTGATTCCAACTaGCAGCCGAACACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: THPNTSSHTHEDRDSHLGQSDSN*QPNTWS
Trigger: AGACCAGGTGTTCGGCTGCCAGTTGGAATCACTCTG...TCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGCAGAGTGATTCCAACTaGCAGCCGAACACCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LTHPNTSSHTHEDRDSHLQSDSN*QPNTWS
Trigger: AGACCAGGTGTTCGGCTGCCAGTTGGAATCACTCTG...CAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATGTGTCTCCTTCCCGCTaGCAGAGTGATTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: HPNTSSHTHEDRDSHLGDVSPSR*QSDSNW
Trigger: CCAGTTGGAATCACTCTGCCAGCGGGAAGGAGACAC...ATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGAGAGCCGCAAAAAGCTaGGCACCGTGTCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGRAAKS*APCLLP
Trigger: GGGAAGGAGACACGGTGCCCAGCTTTTTGCGGCTCT...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp CAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTAGAAAGCGAAGCTTCTaGACCACTGCCAAGTTCCCG +
Preference number: 4 (lower is better)
Translates to: QEEKQGLIHSLSSLEKLPRKRSF*TTAKFP
Trigger: CGGGAACTTGGCAGTGGTCCAGAAGCTTCGCTTTCT...AGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGTTGTCCTGGCTGTTCTaGGAACACATACCTCCCATC +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWELSWLF*EHIPPI
Trigger: GATGGGAGGTATGTGTTCCCAGAACAGCCAGGACAA...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp AATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAACCGACCTTCTTGTCCTaGCTGTTCTGGGAACACATA +
Preference number: 4 (lower is better)
Translates to: NPLTFLFREAPSPIPTPQPTFLS*LFWEHI
Trigger: TATGTGTTCCCAGAACAGCCAGGACAAGAAGGTCGG...TTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGCCGACCTTCTTGTCCTaGCTGTTCTGGGAACACATA +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWEPTFLS*LFWEHI
Trigger: TATGTGTTCCCAGAACAGCCAGGACAAGAAGGTCGG...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTTACCGTAGAGTGTCATaGTTGGGCTTTGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: SSLTHPNTSSHTHEDRDSYRRVS*LGFGIE
Trigger: CTCAATGCCAAAGCCCAACCATGACACTCTACGGTA...ACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACTACCGTAGAGTGTCATaGTTGGGCTTTGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHYRRVS*LGFGIE
Trigger: CTCAATGCCAAAGCCCAACCATGACACTCTACGGTA...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp TTTTCTCTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCACAATTCCCAGGTTGTaGGGTGTCATGCGATTCTTA +
Preference number: 4 (lower is better)
Translates to: FSLLPSLHQGKRLVKLVSTIPRL*GVMRFL
Trigger: TAAGAATCGCATGACACCCCACAACCTGGGAATTGT...GCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTTGGCCGAAACAGGGTTaGTCCAAACACAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPWPKQG*SKHNSQ
Trigger: CTGGGAATTGTGTTTGGACCAACCCTGTTTCGGCCA...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTGGCCGAAACAGGGTTaGTCCAAACACAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: EHQPLTTRDDRKYVFSSSWPKQG*SKHNSQ
Trigger: CTGGGAATTGTGTTTGGACCAACCCTGTTTCGGCCA...GGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACTGGCCGAAACAGGGTTaGTCCAAACACAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: EEKQGLIHSLSSLEKLPHWPKQG*SKHNSQ
Trigger: CTGGGAATTGTGTTTGGACCAACCCTGTTTCGGCCA...GTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACTCTCAGCCGATTGTTTaGGTGACTCTTAGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHSQPIV*VTLRRF
Trigger: GAACCTCCTAAGAGTCACCCAAACAATCGGCTGAGA...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS-3UTR CCA 90 bp TCAAAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCAATGTGAGGCTTTCTaGGTGTGCTGGCCCAGCTAC +
Preference number: 4 (lower is better)
Translates to: SKQNTSLSPPEMTGNMFSQCEAF*VCWPSY
Trigger: GTAGCTGGGCCAGCACACCCAGAAAGCCTCACATTG...AGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS-3UTR CCA 90 bp AGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCAAGAAAAACCCTGCCCTaGGCTAGGAGTCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RREAGVNPLTFLFREAPSRKTLP*ARSLEE
Trigger: TTCCTCCAGACTCCTAGCCCAGGGCAGGGTTTTTCT...TGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430041.6
CDS-3UTR CCA 90 bp ACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAATCGGTGACAGGTTTTaGGGGCTGAGAACTCCTGGT +
Preference number: 4 (lower is better)
Translates to: THPNTSSHTHEDRDSHLGIGDRF*GLRTPG
Trigger: ACCAGGAGTTCTCAGCCCCCAAAACCTGTCACCGAT...TCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424809.6
CDS-3UTR TCA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTCCTCCAGGGAACCATaGAACAACTTCGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGSSREP*NNFGPG
Trigger: TCCTGGGCCGAAGTTGTTTCATGGTTCCCTGGAGGA...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCTTGCAGCCAGTCAGTaGATTTATGTAGAAGCAGCG +
Preference number: 4 (lower is better)
Translates to: EEKQGLIHSLSSLEKLPHLAASQ*IYVEAA
Trigger: CGCTGCTTCTACATAAATTCACTGACTGGCTGCAAG...GTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCTGAAGCCCTTTGCCTaGGGTTGCAGGACATCATTG +
Preference number: 4 (lower is better)
Translates to: EQEEKQGLIHSLSSLEKLLKPFA*GCRTSL
Trigger: CAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAG...GAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp TCAAAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTTCCCTGTGTCAGATCTaGAGCCCTTTGCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: SKQNTSLSPPEMTGNMFSSLCQI*SPLPEV
Trigger: AACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGA...AGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTCAATCTTGGTCATGTTaGGCAGACCCGACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPQSWSC*ADPTFP
Trigger: TGGAAAAGTCGGGTCTGCTCAACATGACCAAGATTG...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CCAAACACAATTCCCAGGTTGTGGGGTGTCATGCGATTCTTATCTGAGTGTGCTCAATCTTGGTCATGTTaGGCAGACCCGACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PNTIPRLWGVMRFLSECAQSWSC*ADPTFP
Trigger: TGGAAAAGTCGGGTCTGCTCAACATGACCAAGATTG...AGCACACTCAGATAAGAATCGCATGACACCCCACAACCTGGGAATTGTGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTGCGGTCTCTTCGCGATaGGCCGCTTTAGTTTGTTGC +
Preference number: 4 (lower is better)
Translates to: VLLCWGGMITGNKKRSRGAVSSR*AALVCC
Trigger: GCAACAAACTAAAGCGGCTCATCGCGAAGAGACCGC...ACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAACCTCCCATCGGAGGTaGCCGCACGCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PLYVLLCWGGMITGNKKRTSHRR*PHALCP
Trigger: TGGACAGAGAGCGTGCGGTCACCTCCGATGGGAGGT...TCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp ATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGACCTCCCATCGGAGGTaGCCGCACGCTCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: MPLYVLLCWGGMITGNKKTSHRR*PHALCP
Trigger: TGGACAGAGAGCGTGCGGTCACCTCCGATGGGAGGT...CTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp AATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAACATGCGATTCTTATCTaGGTGTGCTATCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: NPLTFLFREAPSPIPTPQHAILI*VCYHPA
Trigger: TGCAGGGTGATAGCACACTCAGATAAGAATCGCATG...TTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACATCTCACCACCAGAGATaGCCGGAAATATGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETSHHQR*PEICFL
Trigger: GAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGA...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp ACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCTCTCACCACCAGAGATaGCCGGAAATATGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: TFLFREAPSPIPTPQVTLSHHQR*PEICFL
Trigger: GAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGA...GAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGTCTCACCACCAGAGATaGCCGGAAATATGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIESHHQR*PEICFL
Trigger: GAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGA...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp AGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCGAGATTGCACTGAGCTaGGATCATGCCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: RNDNREQEEKQGLIHSLSEIALS*DHATAL
Trigger: GAGTGCAGTGGCATGATCTCAGCTCAGTGCAATCTC...GGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS-3UTR GCA 90 bp CTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCTTGGGGTCCAGGTGCTaGTCCCAGGCATCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LYVLLCWGGMITGNKKRSLGSRC*SQASSL
Trigger: GAGGCTGGATGCCTGGGAGCAGCACCTGGACCCCAA...GCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTAGATCTGAAGCCCTTTaGCTGAGGTTGCAGGACATC +
Preference number: 4 (lower is better)
Translates to: QEEKQGLIHSLSSLEKLPRSEAL*LRLQDI
Trigger: GATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCT...AGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp ACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTTAAAGGGAGCCGCTTTAGTTTGTTaGGCACGCGGTTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: TSSHTHEDRDSHLGDLKGAALVC*ARGSAR
Trigger: CCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGC...TCCCTTTAAATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp GCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAGCAGACCCCGCTCCTaGAGGCTTTGTAAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: ATLCIIMLGRNDNREQEESRPRS*RLCKGG
Trigger: ACCGCCCTTACAAAGCCTGCAGGAGCGGGGTCTGCT...CTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp TCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGCGCTCACCCGATAAATaGCATCCACATCTAGACCTC +
Preference number: 4 (lower is better)
Translates to: SPIPTPQVTLMKIETVIWRSPDK*HPHLDL
Trigger: GAGGTCTAGATGTGGATGGCATTTATCGGGTGAGCG...CCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGGGTTGTGGGGTGTCATaGGATTCTTATCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: PIPTPQVTLMKIETVIWEGCGVS*DSYLSV
Trigger: CACACTCAGATAAGAATCGCATGACACCCCACAACC...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTGGTTGTGGGGTGTCATaGGATTCTTATCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPGCGVS*DSYLSV
Trigger: CACACTCAGATAAGAATCGCATGACACCCCACAACC...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp GTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTCTCTTCTTCCTTCCCTaGATCAGGGGAAGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VLLCWGGMITGNKKRSRGLFFLP*IRGRGW
Trigger: CCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGAG...ACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp CAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTGTGGGAGTCTTGAGGTaGACACAGGAAGGAGATAAG +
Preference number: 4 (lower is better)
Translates to: QEEKQGLIHSLSSLEKLPVGVLR*TQEGDK
Trigger: CTTATCTCCTTCCTGTGTCCACCTCAAGACTCCCAC...AGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393791.8
CDS-3UTR CCA 90 bp ACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAACCACCAGTCGGAGTTaGTCTTTCGAAGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: THPNTSSHTHEDRDSHLGTTSRS*SFEAVG
Trigger: TCCTACTGCTTCGAAAGACCAACTCCGACTGGTGGT...TCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTTATCATATAGGCTGCTaGGACGAAGATGGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: VNPLTFLFREAPSPIPTPYHIGC*DEDGSR
Trigger: TCTCGACCCATCTTCGTCCCAGCAGCCTATATGATA...AGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACGACTCTGGGAAGGGATaGATTCCTCTATCATATAGG +
Preference number: 4 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHDSGKG*IPLSYR
Trigger: CCTATATGATAGAGGAATCCATCCCTTCCCAGAGTC...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACGACTCTGGGAAGGGATaGATTCCTCTATCATATAGG +
Preference number: 4 (lower is better)
Translates to: SLSSLEKLPHPSQHLKSHDSGKG*IPLSYR
Trigger: CCTATATGATAGAGGAATCCATCCCTTCCCAGAGTC...GTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTGAGGGATCTTCCGCTTaGTCCTTCCTGGAAAGGCTT +
Preference number: 4 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLEGSSA*SFLERL
Trigger: AAGCCTTTCCAGGAAGGACCAAGCGGAAGATCCCTC...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTCTGCTGTGCTGGCACTaGCTTCTGACGGCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: VLLCWGGMITGNKKRSRGLLCWH*LLTASL
Trigger: AAGACTTGCCGTCAGAAGCCAGTGCCAGCACAGCAG...ACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTGGGTCAAGCGGTTCTaGGGTCCCTGTGTCAGATCT +
Preference number: 4 (lower is better)
Translates to: VLLCWGGMITGNKKRSRGWVKRF*GPCVRS
Trigger: AGATCTGACACAGGGACCCCAGAACCGCTTGACCCA...ACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAAGAGCCGCAAAAAGCTaGGCACCGTGTCTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: IIMLGRNDNREQEEKQGLRAAKS*APCLLP
Trigger: GGGAAGGAGACACGGTGCCCAGCTTTTTGCGGCTCT...TAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp AGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGAGAAAGCGAAGCTTCTaGACCACTGCCAAGTTCCCG +
Preference number: 4 (lower is better)
Translates to: REQEEKQGLIHSLSSLEKRKRSF*TTAKFP
Trigger: CGGGAACTTGGCAGTGGTCCAGAAGCTTCGCTTTCT...CTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp TTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCATTGTCCTGGCTGTTCTaGGAACACATACCTCCCATC +
Preference number: 4 (lower is better)
Translates to: LGRNDNREQEEKQGLIHSLSWLF*EHIPPI
Trigger: GATGGGAGGTATGTGTTCCCAGAACAGCCAGGACAA...TGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp ATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGGGTGGCACCAGAGGCTaGGGCAGCTCCCGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: MPLYVLLCWGGMITGNKKGGTRG*GSSRRK
Trigger: TTTTCTCCGGGAGCTGCCCCAGCCTCTGGTGCCACC...CTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTGTAGAGTGTCATGGTTaGGCTTTGGCATTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPVECHG*ALALSL
Trigger: TAGGCTCAATGCCAAAGCCCAACCATGACACTCTAC...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTGTAGAGTGTCATGGTTaGGCTTTGGCATTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: VNPLTFLFREAPSPIPTPVECHG*ALALSL
Trigger: TAGGCTCAATGCCAAAGCCCAACCATGACACTCTAC...AGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp CAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAAACAATTCCCAGGTTGTaGGGTGTCATGCGATTCTTA +
Preference number: 4 (lower is better)
Translates to: QGLIHSLSSLEKLPHPSQTIPRL*GVMRFL
Trigger: TAAGAATCGCATGACACCCCACAACCTGGGAATTGT...TTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACAACAATTCCCAGGTTGTaGGGTGTCATGCGATTCTTA +
Preference number: 4 (lower is better)
Translates to: GVNPLTFLFREAPSPIPTTIPRL*GVMRFL
Trigger: TAAGAATCGCATGACACCCCACAACCTGGGAATTGT...TGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACACAATTCCCAGGTTGTaGGGTGTCATGCGATTCTTA +
Preference number: 4 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHTIPRL*GVMRFL
Trigger: TAAGAATCGCATGACACCCCACAACCTGGGAATTGT...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp ATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTCTGAAGCCCTTTGCCTaGGGTTGCAGGACATCATTG +
Preference number: 4 (lower is better)
Translates to: IPTPQVTLMKIETVIWEILKPFA*GCRTSL
Trigger: CAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAG...AATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGCAATCTTGGTCATGTTaGGCAGACCCGACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LTHPNTSSHTHEDRDSHLQSWSC*ADPTFP
Trigger: TGGAAAAGTCGGGTCTGCTCAACATGACCAAGATTG...CAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp TATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGTTCCCGCTGGCAGAGTaGTTCCAACTGGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: YVLLCWGGMITGNKKRSRFPLAE*FQLAAE
Trigger: TTCGGCTGCCAGTTGGAATCACTCTGCCAGCGGGAA...CCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp TATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGCTTCAGGGCTCCGGTaGCCACATGAATGTCATCCC +
Preference number: 4 (lower is better)
Translates to: YVLLCWGGMITGNKKRSRASGLR*PHECHP
Trigger: GGGATGACATTCATGTGGTCACCGGAGCCCTGAAGC...CCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTAATTCTTGTATCTaGGAGAGGCACTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: APSPIPTPQVTLMKIETVINSCI*ERHCSD
Trigger: ATCAGAGCAGTGCCTCTCTCAGATACAAGAATTAAT...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550399.5
CDS-3UTR TCA 90 bp ACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTCATGCGATTCTTATCTaGGTGTGCTATCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: TEHQPLTTRDDRKYVFSSHAILI*VCYHPA
Trigger: TGCAGGGTGATAGCACACTCAGATAAGAATCGCATG...AGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp AGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCCTCTATCATATAGGCTaGTGGGACGAAGATGGGTCG +
Preference number: 4 (lower is better)
Translates to: RNDNREQEEKQGLIHSLSLYHIG*WDEDGS
Trigger: CGACCCATCTTCGTCCCAGCAGCCTATATGATAGAG...GGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCGGGGCTTCCAGGACTTaGAGCCAGTCAGTGAATTTA +
Preference number: 4 (lower is better)
Translates to: RNDNREQEEKQGLIHSLSGASRT*SQSVNL
Trigger: TAAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCC...GGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCAGATCTGAAGCCCTTTaGCTGAGGTTGCAGGACATC +
Preference number: 4 (lower is better)
Translates to: RNDNREQEEKQGLIHSLSRSEAL*LRLQDI
Trigger: GATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCT...GGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTTATCCACAGCAGCAATaGAGAGCCGCAAAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLYPQQQ*RAAKSW
Trigger: CCAGCTTTTTGCGGCTCTGCATTGCTGCTGTGGATA...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp ATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAGGGTCAGATGTCTCCTaGTCTGGCCGAAACAGGGTT +
Preference number: 4 (lower is better)
Translates to: IIMLGRNDNREQEEKQGLGSDVS*SGRNRV
Trigger: AACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCC...TAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp ACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTTAAAGGGAGTAGAGAGCATGGGCTaGTGGGTCAGATGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: TSSHTHEDRDSHLGDLKGVESMG*WVRCLL
Trigger: CAGGAGACATCTGACCCAGCAGCCCATGCTCTCTAC...TCCCTTTAAATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp AGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCAGCACTGTCACCTTGTaGGGCCCATCAGAAGATTCA +
Preference number: 4 (lower is better)
Translates to: RNDNREQEEKQGLIHSLSSTVTL*GPSEDS
Trigger: TGAATCTTCTGATGGGCCCCACAAGGTGACAGTGCT...GGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000550288.6
CDS-3UTR CCA 90 bp GTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTGACTCTGGGAAGGGATaGATTCCTCTATCATATAGG +
Preference number: 4 (lower is better)
Translates to: VNPLTFLFREAPSPIPTPDSGKG*IPLSYR
Trigger: CCTATATGATAGAGGAATCCATCCCTTCCCAGAGTC...AGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TCAAAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTACGGTAGTTGGACTCTaGGAAGGGATGGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: SKQNTSLSPPEMTGNMFSTVVGL*EGMDSS
Trigger: AGAGGAATCCATCCCTTCCCAGAGTCCAACTACCGT...AGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTTAAAGGGAGGAGTCCAGAGCAATTaGCCGGGGATGACGGTAGTT +
Preference number: 4 (lower is better)
Translates to: TSSHTHEDRDSHLGDLKGGVQSN*PGMTVV
Trigger: AACTACCGTCATCCCCGGCCAATTGCTCTGGACTCC...TCCCTTTAAATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAGACGGCAAGTCTTCCTaGGAGAGGGATCTTCCGCTT +
Preference number: 4 (lower is better)
Translates to: IIMLGRNDNREQEEKQGLDGKSS*ERDLPL
Trigger: AAGCGGAAGATCCCTCTCCCAGGAAGACTTGCCGTC...TAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTACTGCTGTGCTGGCACTaGCTTCTGACGGCAAGTCTT +
Preference number: 4 (lower is better)
Translates to: IIMLGRNDNREQEEKQGLLLCWH*LLTASL
Trigger: AAGACTTGCCGTCAGAAGCCAGTGCCAGCACAGCAG...TAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCTGCGAGGTGCGTTaGCTGAGGCTGAGTGAACCC +
Preference number: 4 (lower is better)
Translates to: PLYVLLCWGGMITGNKKRSCEVR*LRLSEP
Trigger: GGGTTCACTCAGCCTCAGCCAACGCACCTCGCAGCT...TCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAACGCAGCTCTGTCTCGTaGTCCGACTGCAGCAGGAAC +
Preference number: 4 (lower is better)
Translates to: HATLCIIMLGRNDNREQERSSVS*SDCSRN
Trigger: GTTCCTGCTGCAGTCGGACCACGAGACAGAGCTGCG...TTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAGTGTCTCCTTCCCGCTaGCAGAGTGATTCCAACTGG +
Preference number: 4 (lower is better)
Translates to: IIMLGRNDNREQEEKQGLVSPSR*QSDSNW
Trigger: CCAGTTGGAATCACTCTGCCAGCGGGAAGGAGACAC...TAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp GTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTAGAAAGCGAAGCTTCTaGACCACTGCCAAGTTCCCG +
Preference number: 4 (lower is better)
Translates to: VLLCWGGMITGNKKRSRGRKRSF*TTAKFP
Trigger: CGGGAACTTGGCAGTGGTCCAGAAGCTTCGCTTTCT...ACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTTTGTCCTGGCTGTTCTaGGAACACATACCTCCCATC +
Preference number: 4 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLLSWLF*EHIPPI
Trigger: GATGGGAGGTATGTGTTCCCAGAACAGCCAGGACAA...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp ACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTGTAGAGTGTCATGGTTaGGCTTTGGCATTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: TEHQPLTTRDDRKYVFSSVECHG*ALALSL
Trigger: TAGGCTCAATGCCAAAGCCCAACCATGACACTCTAC...AGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp TCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGTAGAGTGTCATGGTTaGGCTTTGGCATTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: SPIPTPQVTLMKIETVIWVECHG*ALALSL
Trigger: TAGGCTCAATGCCAAAGCCCAACCATGACACTCTAC...CCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTACAATTCCCAGGTTGTaGGGTGTCATGCGATTCTTA +
Preference number: 4 (lower is better)
Translates to: VNPLTFLFREAPSPIPTPTIPRL*GVMRFL
Trigger: TAAGAATCGCATGACACCCCACAACCTGGGAATTGT...AGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAGTCGTTAAGTTCTTaGCTGCAGCACTATCCCAAT +
Preference number: 4 (lower is better)
Translates to: VNPLTFLFREAPSPIPTPQSLSS*LQHYPN
Trigger: ATTGGGATAGTGCTGCAGCCAAGAACTTAACGACTG...AGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393797.7
CDS-3UTR CCA 90 bp TCAAAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTAAGAGAGGGAAGGGCTaGGCAAGTCACATCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SKQNTSLSPPEMTGNMFSKRGKG*ASHISR
Trigger: TCTAGAGATGTGACTTGCCCAGCCCTTCCCTCTCTT...AGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430041.6
CDS-3UTR TCA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTCAGATTGTCAGTGCTaGCGCTCCTACACATTTTGC +
Preference number: 4 (lower is better)
Translates to: HPNTSSHTHEDRDSHLGDSDCQC*RSYTFC
Trigger: GCAAAATGTGTAGGAGCGTCAGCACTGACAATCTGA...ATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp GAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCTTGCAGCCAGTCAGTaGATTTATGTAGAAGCAGCG +
Preference number: 4 (lower is better)
Translates to: EQEEKQGLIHSLSSLEKLLAASQ*IYVEAA
Trigger: CGCTGCTTCTACATAAATTCACTGACTGGCTGCAAG...GAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGATTCCCGCTGGCAGAGTaGTTCCAACTGGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: PLYVLLCWGGMITGNKKRFPLAE*FQLAAE
Trigger: TTCGGCTGCCAGTTGGAATCACTCTGCCAGCGGGAA...TCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGTTCCCGCTGGCAGAGTaGTTCCAACTGGCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQFPLAE*FQLAAE
Trigger: TTCGGCTGCCAGTTGGAATCACTCTGCCAGCGGGAA...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGAGAGGCACTGCTCTaGTTCGGAGAGTGCAAGGGC +
Preference number: 4 (lower is better)
Translates to: PLYVLLCWGGMITGNKKRREALL*FGECKG
Trigger: GCCCTTGCACTCTCCGAATCAGAGCAGTGCCTCTCT...TCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
CDS-3UTR GCA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTGGGGCTTCCAGGACTTaGAGCCAGTCAGTGAATTTA +
Preference number: 4 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSGASRT*SQSVNL
Trigger: TAAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCC...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp ATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTAGATCTGAAGCCCTTTaGCTGAGGTTGCAGGACATC +
Preference number: 4 (lower is better)
Translates to: IPTPQVTLMKIETVIWEIRSEAL*LRLQDI
Trigger: GATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCT...AATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp CTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCGCCGCTTTAGTTTGTTaGGCACGCGGTTCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: LYVLLCWGGMITGNKKRSAALVC*ARGSAR
Trigger: CCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGC...GCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTATCCACAGCAGCAATaGAGAGCCGCAAAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSYPQQQ*RAAKSW
Trigger: CCAGCTTTTTGCGGCTCTGCATTGCTGCTGTGGATA...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGCGCTCACCCGATAAATaGCATCCACATCTAGACCTC +
Preference number: 4 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGRSPDK*HPHLDL
Trigger: GAGGTCTAGATGTGGATGGCATTTATCGGGTGAGCG...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp CTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAAGCTTCTGGACCACTaGCAAGTTCCCGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: LYVLLCWGGMITGNKKRSKLLDH*QVPAHP
Trigger: CGGGTGAGCGGGAACTTGGCAGTGGTCCAGAAGCTT...GCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGAAGCTTCTGGACCACTaGCAAGTTCCCGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQKLLDH*QVPAHP
Trigger: CGGGTGAGCGGGAACTTGGCAGTGGTCCAGAAGCTT...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATATCACCCTGCATAAATaGTCCAGGAGGTACCGTAGA +
Preference number: 4 (lower is better)
Translates to: HPNTSSHTHEDRDSHLGDITLHK*SRRYRR
Trigger: TCTACGGTACCTCCTGGAGCATTTATGCAGGGTGAT...ATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp TATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGGGATGACGGTAGTTaGACTCTGGGAAGGGATGGA +
Preference number: 4 (lower is better)
Translates to: YVLLCWGGMITGNKKRSRGDDGS*TLGRDG
Trigger: TCCATCCCTTCCCAGAGTCCAACTACCGTCATCCCC...CCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGACTTTTCCACCTCATaGGGGTCGTCCAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQDFSTS*GSSRSC
Trigger: GCAGCTCCTGGACGACCCCCATGAGGTGGAAAAGTC...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGCAGGAGTTGGTCCTaGGTAGTGGTGGGAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LYVLLCWGGMITGNKKRSSRSWS*VVVGVW
Trigger: CCAGACTCCCACCACTACCCAGGACCAACTCCTGCT...GCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS-3UTR CCA 90 bp CCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAGGGGCTGAGAACTCCTaGTGGTGTCTGGTGAGGAAG +
Preference number: 4 (lower is better)
Translates to: PLYVLLCWGGMITGNKKRGAENS*WCLVRK
Trigger: CTTCCTCACCAGACACCACCAGGAGTTCTCAGCCCC...TCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424809.6
CDS-3UTR TCA 90 bp CCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGATCCTCCAGGGAACCATaGAACAACTTCGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLYVLLCWGGMITGNKKRSSREP*NNFGPG
Trigger: TCCTGGGCCGAAGTTGTTTCATGGTTCCCTGGAGGA...TCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp ATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTCAATCTTGGTCATGTTaGGCAGACCCGACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: IPTPQVTLMKIETVIWEIQSWSC*ADPTFP
Trigger: TGGAAAAGTCGGGTCTGCTCAACATGACCAAGATTG...AATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp TTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCATTAATTCTTGTATCTaGGAGAGGCACTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LIHSLSSLEKLPHPSQHLINSCI*ERHCSD
Trigger: ATCAGAGCAGTGCCTCTCTCAGATACAAGAATTAAT...GAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550399.5
CDS-3UTR TCA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTCTCACCACCAGAGATaGCCGGAAATATGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: HPNTSSHTHEDRDSHLGDSHHQR*PEICFL
Trigger: GAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGA...ATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp CATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAACTCCACTGCACAATGTaGGGCTTTCTGGGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: HATLCIIMLGRNDNREQELHCTM*GFLGVL
Trigger: CAGCACACCCAGAAAGCCTCACATTGTGCAGTGGAG...TTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS-3UTR GCA 90 bp ATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTATATCCACAGCAGCAATaGAGAGCCGCAAAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: IIMLGRNDNREQEEKQGLYPQQQ*RAAKSW
Trigger: CCAGCTTTTTGCGGCTCTGCATTGCTGCTGTGGATA...TAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTGGTTGTGGGGTGTCATaGGATTCTTATCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSGCGVS*DSYLSV
Trigger: CACACTCAGATAAGAATCGCATGACACCCCACAACC...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGGGTTGTGGGGTGTCATaGGATTCTTATCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGGCGVS*DSYLSV
Trigger: CACACTCAGATAAGAATCGCATGACACCCCACAACC...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp CTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCGGGTCAGATGTCTCCTaGTCTGGCCGAAACAGGGTT +
Preference number: 4 (lower is better)
Translates to: LYVLLCWGGMITGNKKRSGSDVS*SGRNRV
Trigger: AACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCC...GCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp ATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGGTAGAGAGCATGGGCTaGTGGGTCAGATGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: MPLYVLLCWGGMITGNKKVESMG*WVRCLL
Trigger: CAGGAGACATCTGACCCAGCAGCCCATGCTCTCTAC...CTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp GTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTATCATATAGGCTGCTaGGACGAAGATGGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: VLLCWGGMITGNKKRSRGYHIGC*DEDGSR
Trigger: TCTCGACCCATCTTCGTCCCAGCAGCCTATATGATA...ACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCCCGCTTGGTCCTTCCTaGAAAGGCTTCAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: LYVLLCWGGMITGNKKRSPLGPS*KGFRRL
Trigger: CAGCCTTCTGAAGCCTTTCCAGGAAGGACCAAGCGG...GCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTACCGTAGAGTGTCATaGTTGGGCTTTGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSYRRVS*LGFGIE
Trigger: CTCAATGCCAAAGCCCAACCATGACACTCTACGGTA...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTACCGTAGAGTGTCATaGTTGGGCTTTGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGYRRVS*LGFGIE
Trigger: CTCAATGCCAAAGCCCAACCATGACACTCTACGGTA...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGAGATGTCTCCTGCTCTaGCCGAAACAGGGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQRCLLL*PKQGWS
Trigger: GGACCAACCCTGTTTCGGCCAGAGCAGGAGACATCT...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp ATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTATCAGATTGTCAGTGCTaGCGCTCCTACACATTTTGC +
Preference number: 4 (lower is better)
Translates to: IIMLGRNDNREQEEKQGLSDCQC*RSYTFC
Trigger: GCAAAATGTGTAGGAGCGTCAGCACTGACAATCTGA...TAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR TCA 90 bp ATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTACTTGCAGCCAGTCAGTaGATTTATGTAGAAGCAGCG +
Preference number: 4 (lower is better)
Translates to: IIMLGRNDNREQEEKQGLLAASQ*IYVEAA
Trigger: CGCTGCTTCTACATAAATTCACTGACTGGCTGCAAG...TAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR TCA 90 bp CTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGATTAATTCTTGTATCTaGGAGAGGCACTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LTHPNTSSHTHEDRDSHLINSCI*ERHCSD
Trigger: ATCAGAGCAGTGCCTCTCTCAGATACAAGAATTAAT...CAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550399.5
CDS-3UTR TCA 90 bp ATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTTCTCACCACCAGAGATaGCCGGAAATATGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: IPTPQVTLMKIETVIWEISHHQR*PEICFL
Trigger: GAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGA...AATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp AATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAATTTGTTCTCCCACTGTaGCCTTCAGATAATTATGAA +
Preference number: 4 (lower is better)
Translates to: NPLTFLFREAPSPIPTPQFVLPL*PSDNYE
Trigger: TTCATAATTATCTGAAGGTCACAGTGGGAGAACAAA...TTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS-3UTR GCA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGCACCTGCTGGCCATCTaGCCCAGTATAAGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQHLLAI*PSISKG
Trigger: GCCTTTACTTATACTGGGGCAGATGGCCAGCAGGTG...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR GCA 90 bp GCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGGGGGCTTCCAGGACTTaGAGCCAGTCAGTGAATTTA +
Preference number: 4 (lower is better)
Translates to: ATLCIIMLGRNDNREQEEGASRT*SQSVNL
Trigger: TAAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCC...CTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR GCA 90 bp ACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTTAAAGGGAATCACCCTGCATAAATaGTCCAGGAGGTACCGTAGA +
Preference number: 4 (lower is better)
Translates to: TSSHTHEDRDSHLGDLKGITLHK*SRRYRR
Trigger: TCTACGGTACCTCCTGGAGCATTTATGCAGGGTGAT...TCCCTTTAAATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR GCA 90 bp ACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTTAAAGGGAGGTTGTGGGGTGTCATaGGATTCTTATCTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: TSSHTHEDRDSHLGDLKGGCGVS*DSYLSV
Trigger: CACACTCAGATAAGAATCGCATGACACCCCACAACC...TCCCTTTAAATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp TATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGACGGTAGTTGGACTCTaGGAAGGGATGGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: YVLLCWGGMITGNKKRSRTVVGL*EGMDSS
Trigger: AGAGGAATCCATCCCTTCCCAGAGTCCAACTACCGT...CCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp ACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTTAAAGGGAGTAGAGTGTCATGGTTaGGCTTTGGCATTGAGCCTA +
Preference number: 4 (lower is better)
Translates to: TSSHTHEDRDSHLGDLKGVECHG*ALALSL
Trigger: TAGGCTCAATGCCAAAGCCCAACCATGACACTCTAC...TCCCTTTAAATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGTATGTATTATTATGTTaGGGAGGAATGATAACAGGG +
Preference number: 4 (lower is better)
Translates to: REAPSPIPTPQVTLMKIEYVLLC*GGMITG
Trigger: CCCTGTTATCATTCCTCCCCAACATAATAATACATA...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp ATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGGTAGTCCCAGCTACTTaGGAGCCTGAGGCACAAGAA +
Preference number: 4 (lower is better)
Translates to: MPLYVLLCWGGMITGNKKVVPAT*EPEAQE
Trigger: TTCTTGTGCCTCAGGCTCCCAAGTAGCTGGGACTAC...CTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS-3UTR TCA 90 bp AGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGATTAATTCTTGTATCTaGGAGAGGCACTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: REQEEKQGLIHSLSSLEKINSCI*ERHCSD
Trigger: ATCAGAGCAGTGCCTCTCTCAGATACAAGAATTAAT...CTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550399.5
CDS-3UTR TCA 90 bp TATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGCATGCGATTCTTATCTaGGTGTGCTATCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: YVLLCWGGMITGNKKRSRHAILI*VCYHPA
Trigger: TGCAGGGTGATAGCACACTCAGATAAGAATCGCATG...CCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR TCA 90 bp CTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGTTTGTTCTCCCACTGTaGCCTTCAGATAATTATGAA +
Preference number: 4 (lower is better)
Translates to: LTHPNTSSHTHEDRDSHLFVLPL*PSDNYE
Trigger: TTCATAATTATCTGAAGGTCACAGTGGGAGAACAAA...CAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS-3UTR TCA 90 bp CATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGGCACAAGAATCACTTaGACCTGGGAGGCAGAGATT +
Preference number: 4 (lower is better)
Translates to: HATLCIIMLGRNDNREQEGTRIT*TWEAEI
Trigger: AATCTCTGCCTCCCAGGTTCAAGTGATTCTTGTGCC...TTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS-3UTR GCA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGAGATCTGAAGCCCTTTaGCTGAGGTTGCAGGACATC +
Preference number: 4 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQRSEAL*LRLQDI
Trigger: GATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCT...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGAGCACTGTCACCTTGTaGGGCCCATCAGAAGATTCA +
Preference number: 4 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQSTVTL*GPSEDS
Trigger: TGAATCTTCTGATGGGCCCCACAAGGTGACAGTGCT...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000550288.6
CDS-3UTR CCA 90 bp CTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCTTGTCCTGGCTGTTCTaGGAACACATACCTCCCATC +
Preference number: 4 (lower is better)
Translates to: LYVLLCWGGMITGNKKRSLSWLF*EHIPPI
Trigger: GATGGGAGGTATGTGTTCCCAGAACAGCCAGGACAA...GCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp CATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAATGGCCGAAACAGGGTTaGTCCAAACACAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: HATLCIIMLGRNDNREQEWPKQG*SKHNSQ
Trigger: CTGGGAATTGTGTTTGGACCAACCCTGTTTCGGCCA...TTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp ATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGTGGCCGAAACAGGGTTaGTCCAAACACAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: MPLYVLLCWGGMITGNKKWPKQG*SKHNSQ
Trigger: CTGGGAATTGTGTTTGGACCAACCCTGTTTCGGCCA...CTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp CCAAACACAATTCCCAGGTTGTGGGGTGTCATGCGATTCTTATCTGAGTGTGCTTATGTATTATTATGTTaGGGAGGAATGATAACAGGG +
Preference number: 4 (lower is better)
Translates to: PNTIPRLWGVMRFLSECAYVLLC*GGMITG
Trigger: CCCTGTTATCATTCCTCCCCAACATAATAATACATA...AGCACACTCAGATAAGAATCGCATGACACCCCACAACCTGGGAATTGTGTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp TTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCTATGTATTATTATGTTaGGGAGGAATGATAACAGGG +
Preference number: 4 (lower is better)
Translates to: LIHSLSSLEKLPHPSQHLYVLLC*GGMITG
Trigger: CCCTGTTATCATTCCTCCCCAACATAATAATACATA...GAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp CATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGCTGAGAACTCCTGGTaGTGTCTGGTGAGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: HATLCIIMLGRNDNREQEAENSW*CLVRKY
Trigger: ATACTTCCTCACCAGACACCACCAGGAGTTCTCAGC...TTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424809.6
CDS-3UTR TCA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGCATGCGATTCTTATCTaGGTGTGCTATCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQHAILI*VCYHPA
Trigger: TGCAGGGTGATAGCACACTCAGATAAGAATCGCATG...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp CCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGATATCATATAGGCTGCTaGGACGAAGATGGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: PLYVLLCWGGMITGNKKRYHIGC*DEDGSR
Trigger: TCTCGACCCATCTTCGTCCCAGCAGCCTATATGATA...TCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CCA 90 bp CCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGATACCGTAGAGTGTCATaGTTGGGCTTTGGCATTGAG +
Preference number: 4 (lower is better)
Translates to: PLYVLLCWGGMITGNKKRYRRVS*LGFGIE
Trigger: CTCAATGCCAAAGCCCAACCATGACACTCTACGGTA...TCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp AGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGTATGTATTATTATGTTaGGGAGGAATGATAACAGGG +
Preference number: 4 (lower is better)
Translates to: REQEEKQGLIHSLSSLEKYVLLC*GGMITG
Trigger: CCCTGTTATCATTCCTCCCCAACATAATAATACATA...CTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTTATGTATTATTATGTTaGGGAGGAATGATAACAGGG +
Preference number: 4 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLYVLLC*GGMITG
Trigger: CCCTGTTATCATTCCTCCCCAACATAATAATACATA...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CCA 90 bp CATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAATATGTATTATTATGTTaGGGAGGAATGATAACAGGG +
Preference number: 4 (lower is better)
Translates to: HATLCIIMLGRNDNREQEYVLLC*GGMITG
Trigger: CCCTGTTATCATTCCTCCCCAACATAATAATACATA...TTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS GCA 90 bp GTGCGGATGTGCAGGACGTTGCGGCGGCTGGACAGGTGGCGGCCGTaGGCCAGGGCCGCCCCGCGCAGGTCCACGCTACTTTCGGGCCGG +
Preference number: 5 (lower is better)
Translates to: VRMCRTLRRLDRWRP*ARAAPRRSTLLSGR
Trigger: CCGGCCCGAAAGTAGCGTGGACCTGCGCGGGGCGGCCCTGGCGCACGGCCGCCACCTGTCCAGCCGCCGCAACGTCCTGCACATCCGCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000548139.5
ENST00000550288.6
ENST00000552953.5
CDS CCA 90 bp CCAGGGATCGTGCGGATGTGCAGGACGTTGCGGCGGCTGGACAGGTaGCGGCCGTGCGCCAGGGCCGCCCCGCGCAGGTCCACGCTACTT +
Preference number: 5 (lower is better)
Translates to: PGIVRMCRTLRRLDR*RPCARAAPRRSTLL
Trigger: AAGTAGCGTGGACCTGCGCGGGGCGGCCCTGGCGCACGGCCGCCACCTGTCCAGCCGCCGCAACGTCCTGCACATCCGCACGATCCCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000548139.5
ENST00000550288.6
ENST00000552953.5
CDS TCA 90 bp AGCGCCCGCACCCATCCTGCGCCTCTCGCTCACACTCACCCAGCCTaGGGAGGGCGCTGTCGGCGGTGGCTCTCGGTAGAACACCAGGCT +
Preference number: 5 (lower is better)
Translates to: SARTHPAPLAHTHPA*GGRCRRWLSVEHQA
Trigger: AGCCTGGTGTTCTACCGAGAGCCACCGCCGACAGCGCCCTCCTCAGGCTGGGTGAGTGTGAGCGAGAGGCGCAGGATGGGTGCGGGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552953.5
CDS GCA 90 bp CGCAGCGCGCGGTGCCAGGCTCGCAGCTCTGTCTCGTGGTCCGACTaGAGCAGGAACTCGTGGCCAGGGATCGTGCGGATGTGCAGGACG +
Preference number: 5 (lower is better)
Translates to: RSARCQARSSVSWSD*SRNSWPGIVRMCRT
Trigger: CGTCCTGCACATCCGCACGATCCCTGGCCACGAGTTCCTGCTGCAGTCGGACCACGAGACAGAGCTGCGAGCCTGGCACCGCGCGCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000548139.5
ENST00000550288.6
ENST00000552953.5
CDS CCA 90 bp ATGACAGTCCGCAGCGCGCGGTGCCAGGCTCGCAGCTCTGTCTCGTaGTCCGACTGCAGCAGGAACTCGTGGCCAGGGATCGTGCGGATG +
Preference number: 5 (lower is better)
Translates to: MTVRSARCQARSSVS*SDCSRNSWPGIVRM
Trigger: CATCCGCACGATCCCTGGCCACGAGTTCCTGCTGCAGTCGGACCACGAGACAGAGCTGCGAGCCTGGCACCGCGCGCTGCGGACTGTCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000548139.5
ENST00000550288.6
ENST00000552953.5
CDS GCA 90 bp GGTCTCTTCGCGATGAGCCGCTTTAGTTTGTTGCGCACGCGGTTCTaGTCGGTGCCTTCGGGCCCCCGAATGGAGCTCCGGCGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GLFAMSRFSLLRTRF*SVPSGPRMELRRLL
Trigger: CAGCAGCCGCCGGAGCTCCATTCGGGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCATCGCGAAGAGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000550288.6
ENST00000552953.5
CDS TCA 90 bp GCTGCGACTGCGGCGCGGGGGCTTCCAGGACTTGCAGCCAGTCAGTaGATTTATGTAGAAGCAGCGTCCAGAGTTGGGGTCCAGGTGCTG +
Preference number: 5 (lower is better)
Translates to: AATAARGLPGLAASQ*IYVEAASRVGVQVL
Trigger: CAGCACCTGGACCCCAACTCTGGACGCTGCTTCTACATAAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCCCGCGCCGCAGTCGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000547216.1
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000550454.5
ENST00000551000.1
ENST00000551452.5
ENST00000551574.1
ENST00000552066.1
ENST00000552420.5
ENST00000552604.5
CDS TCA 90 bp GCAGACCCCGCTCCTGCAGGCTTTGTAAGGGCGGTCTCTTCGCGATaGGCCGCTTTAGTTTGTTGCGCACGCGGTTCTGCTCGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: ADPAPAGFVRAVSSR*AALVCCARGSARCL
Trigger: AAGGCACCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCATCGCGAAGAGACCGCCCTTACAAAGCCTGCAGGAGCGGGGTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000550288.6
ENST00000550440.5
ENST00000552953.5
CDS CCA 90 bp GCGGGGAAGTGGAGGAGGCTGCTCCGAGCTAGCCTGAGCCCTGCTTaGGAGGGCCTGAGACAACTCCTCCAGGGAACCATGAAACAACTT +
Preference number: 5 (lower is better)
Translates to: AGKWRRLLRASLSPA*EGLRQLLQGTMKQL
Trigger: AAGTTGTTTCATGGTTCCCTGGAGGAGTTGTCTCAGGCCCTCCCAAGCAGGGCTCAGGCTAGCTCGGAGCAGCCTCCTCCACTTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552249.1
ENST00000552420.5
CDS CCA 90 bp GCTCAGATTGTCAGTGCTGACGCTCCTACACATTTTGCGGGGAAGTaGAGGAGGCTGCTCCGAGCTAGCCTGAGCCCTGCTTGGGAGGGC +
Preference number: 5 (lower is better)
Translates to: AQIVSADAPTHFAGK*RRLLRASLSPAWEG
Trigger: GCCCTCCCAAGCAGGGCTCAGGCTAGCTCGGAGCAGCCTCCTCCACTTCCCCGCAAAATGTGTAGGAGCGTCAGCACTGACAATCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552249.1
ENST00000552420.5
CDS CCA 90 bp GGGCAGGGAGGATCTTGGCCTTCACAAAGAAATGGGAGATTCACATaGGGGTCGTCCAGGAGCTGCGGCAGAGGTCGAGGGGCCTGCAAG +
Preference number: 5 (lower is better)
Translates to: GQGGSWPSQRNGRFT*GSSRSCGRGRGACK
Trigger: CTTGCAGGCCCCTCGACCTCTGCCGCAGCTCCTGGACGACCCCCATGTGAATCTCCCATTTCTTTGTGAAGGCCAAGATCCTCCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546200.5
ENST00000548148.5
ENST00000552420.5
CDS TCA 90 bp GAGCCGCAAAAAGCTGGGCACCGTGTCTCCTTCCCGCTGGCAGAGTaGTTCCAACTGGCAGCCGAACACCTGGTCTGGGGAAGTAGAGTG +
Preference number: 5 (lower is better)
Translates to: EPQKAGHRVSFPLAE*FQLAAEHLVWGSRV
Trigger: CACTCTACTTCCCCAGACCAGGTGTTCGGCTGCCAGTTGGAATCACTCTGCCAGCGGGAAGGAGACACGGTGCCCAGCTTTTTGCGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546704.1
CDS GCA 90 bp CAGGGTTCGTCTCGCTGCGACTGCGGCGCGGGGGCTTCCAGGACTTaGAGCCAGTCAGTGAATTTATGTAGAAGCAGCGTCCAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: QGSSRCDCGAGASRT*SQSVNLCRSSVQSW
Trigger: CCAACTCTGGACGCTGCTTCTACATAAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCCCGCGCCGCAGTCGCAGCGAGACGAACCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000550454.5
ENST00000551452.5
ENST00000551574.1
ENST00000552066.1
ENST00000552420.5
ENST00000552604.5
CDS GCA 90 bp GTCTCACCGTCTCGCTGCGACTGCGGCGCGGGGGCTTCCAGGACTTaGAGCCAGTCAGTGAATTTATGTAGAAGCAGCGTCCAGAGTTGG +
Preference number: 5 (lower is better)
Translates to: VSPSRCDCGAGASRT*SQSVNLCRSSVQSW
Trigger: CCAACTCTGGACGCTGCTTCTACATAAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCCCGCGCCGCAGTCGCAGCGAGACGGTGAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547216.1
ENST00000551000.1
CDS CCA 90 bp TGGGGGCCTGCTGTGCTGGCACTGGCTTCTGACGGCAAGTCTTCCTaGGAGAGGGATCTTCCGCTTGGTCCTTCCTGGAAAGGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: WGPAVLALASDGKSS*ERDLPLGPSWKGFR
Trigger: TCTGAAGCCTTTCCAGGAAGGACCAAGCGGAAGATCCCTCTCCCAGGAAGACTTGCCGTCAGAAGCCAGTGCCAGCACAGCAGGCCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552249.1
ENST00000552420.5
CDS TCA 90 bp ATGGTTCTAGGAGCAGTGTTGCAGGGAGGTGAGGACGGGAGCCCTTaGGTTGGGGGAGAGGGTAGAGCAAACAGCCTGGTGAGGATCGGT +
Preference number: 5 (lower is better)
Translates to: MVLGAVLQGGEDGSP*VGGEGRANSLVRIG
Trigger: ACCGATCCTCACCAGGCTGTTTGCTCTACCCTCTCCCCCAACTCAAGGGCTCCCGTCCTCACCTCCCTGCAACACTGCTCCTAGAACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424809.6
CDS TCA 90 bp AGTGATTCCAACTGGCAGCCGAACACCTGGTCTGGGGAAGTAGAGTaGGGCGGGAAGCCAGTGCCAGCGTCACTCACAGGAGCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: SDSNWQPNTWSGEVE*GGKPVPASLTGALL
Trigger: GAGAAGAGCTCCTGTGAGTGACGCTGGCACTGGCTTCCCGCCTCACTCTACTTCCCCAGACCAGGTGTTCGGCTGCCAGTTGGAATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546704.1
CDS TCA 90 bp GCCCAGCTCAGAAGAGCTGTGACTCACTGTGCTGGCACTGGCTTCTaGCGGCAAGTCTTCCTGGGAGAGGGATCTTCCGCTTGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: AQLRRAVTHCAGTGF*RQVFLGEGSSAWSF
Trigger: GAAGGACCAAGCGGAAGATCCCTCTCCCAGGAAGACTTGCCGTCAGAAGCCAGTGCCAGCACAGTGAGTCACAGCTCTTCTGAGCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552066.1
CDS GCA 90 bp CTGTGCCTAGAACAGGGCCCAGCTCAGAAGAGCTGTGACTCACTGTaGTGGCACTGGCTTCTGACGGCAAGTCTTCCTGGGAGAGGGATC +
Preference number: 5 (lower is better)
Translates to: LCLEQGPAQKSCDSL*WHWLLTASLPGRGI
Trigger: GATCCCTCTCCCAGGAAGACTTGCCGTCAGAAGCCAGTGCCAGCACAGTGAGTCACAGCTCTTCTGAGCTGGGCCCTGTTCTAGGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552066.1
CDS CCA 90 bp GAACAGGGCCCAGCTCAGAAGAGCTGTGACTCACTGTGCTGGCACTaGCTTCTGACGGCAAGTCTTCCTGGGAGAGGGATCTTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: EQGPAQKSCDSLCWH*LLTASLPGRGIFRL
Trigger: CAAGCGGAAGATCCCTCTCCCAGGAAGACTTGCCGTCAGAAGCCAGTGCCAGCACAGTGAGTCACAGCTCTTCTGAGCTGGGCCCTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552066.1
CDS CCA 90 bp TTGTTTCCTTCACTGCTTCCCTCTCCCCGGTGGGCTGTGAGGAGGTaGGAGGCTTCCTCACTTCTTTACTTTCCTCTGCACCGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: LFPSLLPSPRWAVRR*EASSLLYFPLHRPP
Trigger: GGGAGGGCGGTGCAGAGGAAAGTAAAGAAGTGAGGAAGCCTCCCACCTCCTCACAGCCCACCGGGGAGAGGGAAGCAGTGAAGGAAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552953.5
CDS CCA 90 bp GACGGCAAGTCTTCCTGGGAGAGGGATCTTCCGCTTGGTCCTTCCTaGAAAGGCTTCAGAAGGCTGGGGCTCAGATTGTCAGTGCTGACG +
Preference number: 5 (lower is better)
Translates to: DGKSSWERDLPLGPS*KGFRRLGLRLSVLT
Trigger: CGTCAGCACTGACAATCTGAGCCCCAGCCTTCTGAAGCCTTTCCAGGAAGGACCAAGCGGAAGATCCCTCTCCCAGGAAGACTTGCCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552249.1
ENST00000552420.5
CDS CCA 90 bp TGCCTAGAACAGGGCCCAGCTCAGAAGAGCTGTGACTCACTGTGCTaGCACTGGCTTCTGACGGCAAGTCTTCCTGGGAGAGGGATCTTC +
Preference number: 5 (lower is better)
Translates to: CLEQGPAQKSCDSLC*HWLLTASLPGRGIF
Trigger: GAAGATCCCTCTCCCAGGAAGACTTGCCGTCAGAAGCCAGTGCCAGCACAGTGAGTCACAGCTCTTCTGAGCTGGGCCCTGTTCTAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552066.1
CDS CCA 90 bp CTTCGGCCCAGGAGTCCAGAGCAATTGGCCGGGGATGACGGTAGTTaGACTCTGGGAAGGGATGGATTCCTCTATCATATAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: LRPRSPEQLAGDDGS*TLGRDGFLYHIGCW
Trigger: CCAGCAGCCTATATGATAGAGGAATCCATCCCTTCCCAGAGTCCAACTACCGTCATCCCCGGCCAATTGCTCTGGACTCCTGGGCCGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552420.5
CDS-3UTR CAA 90 bp TCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATCAGCTGGAGCTTCTAGGCGTCTaGCCAACCACCAGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: SSFPASGEEAGEVGEHQLELLGV*PTTSRS
Trigger: ACTCCGACTGGTGGTTGGCAAGACGCCTAGAAGCTC...CAGCTGATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS TCA 90 bp TCAAGCGGTTCTGGGGTCCCTGTGTCAGATCTGAAGCCCTTTGCCTaGGGTTGCAGGACATCATTGTTCCTCTTCAGGGTCTGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: SSGSGVPVSDLKPFA*GCRTSLFLFRVCVP
Trigger: GGGGACACAGACCCTGAAGAGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGACCCCAGAACCGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000547216.1
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000550454.5
ENST00000551452.5
ENST00000551574.1
ENST00000552066.1
ENST00000552420.5
ENST00000552604.5
CDS TCA 90 bp CCACCTCCTGTGGGTCAAGCGGTTCTGGGGTCCCTGTGTCAGATCTaGAGCCCTTTGCCTGAGGTTGCAGGACATCATTGTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: PPPVGQAVLGSLCQI*SPLPEVAGHHCSSS
Trigger: TGAAGAGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGACCCCAGAACCGCTTGACCCACAGGAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550454.5
ENST00000552604.5
CDS CCA 90 bp AGGTGGAGGGAGCTTCTAGGCGTCTTGCCAACCACCAGTCGGAGTTaGTCTTTCGAAGCAGTAGGAACCTATCCCCTTCAGCCAGAGACA +
Preference number: 5 (lower is better)
Translates to: RWRELLGVLPTTSRS*SFEAVGTYPLQPET
Trigger: TGTCTCTGGCTGAAGGGGATAGGTTCCTACTGCTTCGAAAGACCAACTCCGACTGGTGGTTGGCAAGACGCCTAGAAGCTCCCTCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552420.5
CDS CCA 90 bp ATTCCTCTATCATATAGGCTGCTGGGACGAAGATGGGTCGAGAGGTaGAGGGAGCTTCTAGGCGTCTTGCCAACCACCAGTCGGAGTTGG +
Preference number: 5 (lower is better)
Translates to: IPLSYRLLGRRWVER*RELLGVLPTTSRSW
Trigger: CCAACTCCGACTGGTGGTTGGCAAGACGCCTAGAAGCTCCCTCCACCTCTCGACCCATCTTCGTCCCAGCAGCCTATATGATAGAGGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552420.5
CDS CCA 90 bp TGGGCAATCTTGGTCATGTTGAGCAGACCCGACTTTTCCACCTCCTaGGAAGTGGAGGGAATGGGATCTGTAAGTCACCCTCGCCCTCCA +
Preference number: 5 (lower is better)
Translates to: WAILVMLSRPDFSTS*EVEGMGSVSHPRPP
Trigger: TGGAGGGCGAGGGTGACTTACAGATCCCATTCCCTCCACTTCCCAGGAGGTGGAAAAGTCGGGTCTGCTCAACATGACCAAGATTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546200.5
ENST00000548148.5
CDS-3UTR CAA 90 bp TCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACAAGCAGCGTCCAGAGTaGGGGTCCAGGTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SLSSLEKLPHPSQHLKSHKQRPE*GSRCCS
Trigger: GGAGCAGCACCTGGACCCCAACTCTGGACGCTGCTT...GTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GGGCTGCTGGGTCAGATGTCTCCTGCTCTGGCCGAAACAGGGTTGGTCCAAACAGCAATCTTGGTCATGTaGAGCAGACCCGACTTTTCC +
Preference number: 5 (lower is better)
Translates to: GLLGQMSPALAETGLVQTAILVM*SRPDFS
Trigger: GGAAAAGTCGGGTCTGCTCAACATGACCAAGATTGC...TGTTTGGACCAACCCTGTTTCGGCCAGAGCAGGAGACATCTGACCCAGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTCGGATGTGCAGGACGTaGCGGCGGCTGGACAGGTGG +
Preference number: 5 (lower is better)
Translates to: NTSLSPPEMTGNMFSLLPRMCRT*RRLDRW
Trigger: CCACCTGTCCAGCCGCCGCAACGTCCTGCACATCCG...AGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp TTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATACGGATGTGCAGGACGTaGCGGCGGCTGGACAGGTGG +
Preference number: 5 (lower is better)
Translates to: FREAPSPIPTPQVTLMKIRMCRT*RRLDRW
Trigger: CCACCTGTCCAGCCGCCGCAACGTCCTGCACATCCG...TATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp CTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATCAGCATGAGCCGCTTTAGTTaGTTGCGCACGCGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LLPSLHQGKRLVKLVSISMSRFS*LRTRFC
Trigger: GCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCAT...GCTGATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTCCGATCCCCACTCCCTaGGTCCCGGCCGGTCGGAGC +
Preference number: 5 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSPIPTP*VPAGRS
Trigger: GCTCCGACCGGCCGGGACCAAGGGAGTGGGGATCGG...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393797.7
CDS-3UTR CAA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCGTTCTAGGAGCAGTGTaGCAGGGAGGTGAGGACGGG +
Preference number: 5 (lower is better)
Translates to: APSPIPTPQVTLMKIETVVLGAV*QGGEDG
Trigger: CCCGTCCTCACCTCCCTGCAACACTGCTCCTAGAAC...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424809.6
CDS TCA 90 bp GTGAACCCTGTGGGTCAAGCGGTTCTGGGGTCCCTGTGTCAGATCTaGAGCCCTTTGCCTGAGGTTGCAGGACATCATTGTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: VNPVGQAVLGSLCQI*SPLPEVAGHHCSSS
Trigger: TGAAGAGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGACCCCAGAACCGCTTGACCCACAGGGTTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000547216.1
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000551452.5
ENST00000551574.1
ENST00000552066.1
CDS GCA 90 bp TGGGTCAAGCGGTTCTGGGGTCCCTGTGTCAGATCTGAAGCCCTTTaGCTGAGGTTGCAGGACATCATTGTTCCTCTTCAGGGTCTGTGT +
Preference number: 5 (lower is better)
Translates to: WVKRFWGPCVRSEAL*LRLQDIIVPLQGLC
Trigger: ACACAGACCCTGAAGAGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGACCCCAGAACCGCTTGACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000547216.1
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000550454.5
ENST00000551452.5
ENST00000551574.1
ENST00000552066.1
ENST00000552420.5
ENST00000552604.5
CDS CCA 90 bp TTGTTCCTCTTCAGGGTCTGTGTCCCCTCCATGGAGCCAGGGTTCTaGGTTAGGGGAGGAGGAAATAAAGCTACATCCAGATGCCACCTC +
Preference number: 5 (lower is better)
Translates to: LFLFRVCVPSMEPGF*VRGGGNKATSRCHL
Trigger: GAGGTGGCATCTGGATGTAGCTTTATTTCCTCCTCCCCTAACCCAGAACCCTGGCTCCATGGAGGGGACACAGACCCTGAAGAGGAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547216.1
ENST00000551000.1
CDS-3UTR CAA 90 bp TTTTCTCTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCGCCAGCACTGTCACCTaGTGGGGCCCATCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: FSLLPSLHQGKRLVKLVSASTVT*WGPSED
Trigger: ATCTTCTGATGGGCCCCACAAGGTGACAGTGCTGGC...GCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGAGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS-3UTR CAA 90 bp TTCTCTTCTTCCTTCCCTGCATCAGGGGAAGAGGCTGGTGAAGTTGGTGAGCATACGCTCCTACACATTTaGCGGGGAAGTGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: FSSSFPASGEEAGEVGEHTLLHI*RGSGGG
Trigger: GCCTCCTCCACTTCCCCGCAAAATGTGTAGGAGCGT...ATGCTCACCAACTTCACCAGCCTCTTCCCCTGATGCAGGGAAGGAAGAAGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCTCTCCTCACTTCCTGTaGCCAACTTCCCGCCTCCCC +
Preference number: 5 (lower is better)
Translates to: REAGVNPLTFLFREAPSPSPHFL*PTSRLP
Trigger: GGGGAGGCGGGAAGTTGGCAACAGGAAGTGAGGAGA...GGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430041.6
CDS TCA 90 bp ATCTCACCTGTGGGTCAAGCGGTTCTGGGGTCCCTGTGTCAGATCTaGAGCCCTTTGCCTGAGGTTGCAGGACATCATTGTTCCTCTTCA +
Preference number: 5 (lower is better)
Translates to: ISPVGQAVLGSLCQI*SPLPEVAGHHCSSS
Trigger: TGAAGAGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGACCCCAGAACCGCTTGACCCACAGGTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552420.5
CDS GCA 90 bp GAAAGAGAGGGAAGGGCTGGGCAAGTCACATCTCTAGAGGAGACCTaGTGTAGCCTATCAGGCAAGCAGAACACAGAAAAACCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: EREGRAGQVTSLEET*CSLSGKQNTEKPCP
Trigger: AGGGCAGGGTTTTTCTGTGTTCTGCTTGCCTGATAGGCTACAGCAGGTCTCCTCTAGAGATGTGACTTGCCCAGCCCTTCCCTCTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430041.6
CDS CCA 90 bp AGGCTTTCTGGGTGTGCTGGCCCAGCTACTGTAGTCCCAGCTACTTaGGAGCCTGAGGCACAAGAATCACTTGAACCTCTTCTCATTCTC +
Preference number: 5 (lower is better)
Translates to: RLSGCAGPATVVPAT*EPEAQESLEPLLIL
Trigger: GAGAATGAGAAGAGGTTCAAGTGATTCTTGTGCCTCAGGCTCCCAAGTAGCTGGGACTACAGTAGCTGGGCCAGCACACCCAGAAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393797.7
CDS-3UTR CAA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACAGGAGTCCAGAGCAATaGGCCGGGGATGACGGTAGT +
Preference number: 5 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHRSPEQ*AGDDGS
Trigger: ACTACCGTCATCCCCGGCCAATTGCTCTGGACTCCT...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACAAGGCTGGGGCTCAGATaGTCAGTGCTGACGCTCCTA +
Preference number: 5 (lower is better)
Translates to: GVNPLTFLFREAPSPIPTRLGLR*SVLTLL
Trigger: TAGGAGCGTCAGCACTGACAATCTGAGCCCCAGCCT...TGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGAGGCTGGGGCTCAGATaGTCAGTGCTGACGCTCCTA +
Preference number: 5 (lower is better)
Translates to: REAPSPIPTPQVTLMKIERLGLR*SVLTLL
Trigger: TAGGAGCGTCAGCACTGACAATCTGAGCCCCAGCCT...CTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp TTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAAAGCAGCGTCCAGAGTaGGGGTCCAGGTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: FREAPSPIPTPQVTLMKIKQRPE*GSRCCS
Trigger: GGAGCAGCACCTGGACCCCAACTCTGGACGCTGCTT...TATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp TCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGAAGCAGCGTCCAGAGTaGGGGTCCAGGTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: SPIPTPQVTLMKIETVIWKQRPE*GSRCCS
Trigger: GGAGCAGCACCTGGACCCCAACTCTGGACGCTGCTT...CCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACACCCCCTTGGGCAATCTaGGTCATGTTGAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETPPWAI*VMLSRP
Trigger: GGGTCTGCTCAACATGACCAAGATTGCCCAAGGGGG...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp TCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACCCCCCTTGGGCAATCTaGGTCATGTTGAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: SLSSLEKLPHPSQHLKSHPPWAI*VMLSRP
Trigger: GGGTCTGCTCAACATGACCAAGATTGCCCAAGGGGG...GTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACAGCCGCTTTAGTTTGTaGCGCACGCGGTTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHSRFSL*RTRFCS
Trigger: CGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCT...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACAGGAGTCCAGAGCAATaGGCCGGGGATGACGGTAGT +
Preference number: 5 (lower is better)
Translates to: EEKQGLIHSLSSLEKLPHRSPEQ*AGDDGS
Trigger: ACTACCGTCATCCCCGGCCAATTGCTCTGGACTCCT...GTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp TTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCACGCTCCTACACATTTaGCGGGGAAGTGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: LIHSLSSLEKLPHPSQHLTLLHI*RGSGGG
Trigger: GCCTCCTCCACTTCCCCGCAAAATGTGTAGGAGCGT...GAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTAGGCTGGGGCTCAGATaGTCAGTGCTGACGCTCCTA +
Preference number: 5 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPRLGLR*SVLTLL
Trigger: TAGGAGCGTCAGCACTGACAATCTGAGCCCCAGCCT...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCAAGCAGCGTCCAGAGTaGGGGTCCAGGTGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: EQEEKQGLIHSLSSLEKLKQRPE*GSRCCS
Trigger: GGAGCAGCACCTGGACCCCAACTCTGGACGCTGCTT...GAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGGGGGCTTCCAGGACTaGCAGCCAGTCAGTGAATTT +
Preference number: 5 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETGGFQD*QPVSEF
Trigger: AAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCCC...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp CTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGGGGGGCTTCCAGGACTaGCAGCCAGTCAGTGAATTT +
Preference number: 5 (lower is better)
Translates to: LFREAPSPIPTPQVTLMKGGFQD*QPVSEF
Trigger: AAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCCC...CTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp ACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCGGGGGCTTCCAGGACTaGCAGCCAGTCAGTGAATTT +
Preference number: 5 (lower is better)
Translates to: TFLFREAPSPIPTPQVTLGGFQD*QPVSEF
Trigger: AAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCCC...GAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCGCCCTTTGCCTGAGGTaGCAGGACATCATTGTTCCT +
Preference number: 5 (lower is better)
Translates to: APSPIPTPQVTLMKIETVALCLR*QDIIVP
Trigger: AGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGC...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCCCCCCTTGGGCAATCTaGGTCATGTTGAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: EHQPLTTRDDRKYVFSSSPPWAI*VMLSRP
Trigger: GGGTCTGCTCAACATGACCAAGATTGCCCAAGGGGG...GGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp TTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAGCCGCTTTAGTTTGTaGCGCACGCGGTTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: LIHSLSSLEKLPHPSQHLSRFSL*RTRFCS
Trigger: CGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCT...GAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGAGCCGCTTTAGTTTGTaGCGCACGCGGTTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: PIPTPQVTLMKIETVIWESRFSL*RTRFCS
Trigger: CGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCT...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp CTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATGAGCCGCTTTAGTTaGTTGCGCACGCGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: LFREAPSPIPTPQVTLMKMSRFS*LRTRFC
Trigger: GCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCAT...CTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCCGTAGAGTGTCATGGTaGGGCTTTGGCATTGAGCCT +
Preference number: 5 (lower is better)
Translates to: APSPIPTPQVTLMKIETVRRVSW*GFGIEP
Trigger: AGGCTCAATGCCAAAGCCCAACCATGACACTCTACG...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp GGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACAAGAGGCTGGTGAAGTaGGTGAGCATCAGCTGGACC +
Preference number: 5 (lower is better)
Translates to: GLIHSLSSLEKLPHPSQHKRLVK*VSISWT
Trigger: GGTCCAGCTGATGCTCACCAACTTCACCAGCCTCTT...GTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp TTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAACGGGAGCCCTTGAGTaGGGGGAGAGGGTAGAGCAA +
Preference number: 5 (lower is better)
Translates to: FREAPSPIPTPQVTLMKITGALE*GERVEQ
Trigger: TTGCTCTACCCTCTCCCCCAACTCAAGGGCTCCCGT...TATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000424809.6
CDS TCA 90 bp GTGTCATGGTTGGGCTTTGGCATTGAGCCTATTAATTCTTGTATCTaGGAGAGGCACTGCTCTGATTCGGAGAGTGCAAGGGCAGCACGG +
Preference number: 5 (lower is better)
Translates to: VSWLGFGIEPINSCI*ERHCSDSESARAAR
Trigger: CCGTGCTGCCCTTGCACTCTCCGAATCAGAGCAGTGCCTCTCTCAGATACAAGAATTAATAGGCTCAATGCCAAAGCCCAACCATGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000546200.5
ENST00000550130.1
ENST00000550440.5
ENST00000552953.5
CDS GCA 90 bp CCAGGGTTCTGGGTTAGGGGAGGAGGAAATAAAGCTACATCCAGATaGCACCTCTACCCACTCTCCACACCCTTCTTATACTTGGCTGAT +
Preference number: 5 (lower is better)
Translates to: PGFWVRGGGNKATSR*HLYPLSTPFLYLAD
Trigger: ATCAGCCAAGTATAAGAAGGGTGTGGAGAGTGGGTAGAGGTGGCATCTGGATGTAGCTTTATTTCCTCCTCCCCTAACCCAGAACCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547216.1
ENST00000551000.1
CDS-3UTR CAA 90 bp ATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACGCCAGCACTGTCACCTaGTGGGGCCCATCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: MLGRNDNREQEEKQGLIHASTVT*WGPSED
Trigger: ATCTTCTGATGGGCCCCACAAGGTGACAGTGCTGGC...GTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000550288.6
CDS-3UTR CAA 90 bp TCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGCTTCTAGGCGTCTaGCCAACCACCAGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: SPIPTPQVTLMKIETVIWELLGV*PTTSRS
Trigger: ACTCCGACTGGTGGTTGGCAAGACGCCTAGAAGCTC...CCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp TCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGACGCTCCTACACATTTaGCGGGGAAGTGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: SPIPTPQVTLMKIETVIWTLLHI*RGSGGG
Trigger: GCCTCCTCCACTTCCCCGCAAAATGTGTAGGAGCGT...CCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGGGGGCTTCCAGGACTaGCAGCCAGTCAGTGAATTT +
Preference number: 5 (lower is better)
Translates to: NPLTFLFREAPSPIPTPQGGFQD*QPVSEF
Trigger: AAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCCC...TTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp TCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACGCCCTTTGCCTGAGGTaGCAGGACATCATTGTTCCT +
Preference number: 5 (lower is better)
Translates to: SLSSLEKLPHPSQHLKSHALCLR*QDIIVP
Trigger: AGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGC...GTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp ACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGACCCCCTTGGGCAATCTaGGTCATGTTGAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: THPNTSSHTHEDRDSHLGPPWAI*VMLSRP
Trigger: GGGTCTGCTCAACATGACCAAGATTGCCCAAGGGGG...TCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp TATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGCGGATGTGCAGGACGTaGCGGCGGCTGGACAGGTGG +
Preference number: 5 (lower is better)
Translates to: YVLLCWGGMITGNKKRSRRMCRT*RRLDRW
Trigger: CCACCTGTCCAGCCGCCGCAACGTCCTGCACATCCG...CCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp ACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCCGTAGAGTGTCATGGTaGGGCTTTGGCATTGAGCCT +
Preference number: 5 (lower is better)
Translates to: TFLFREAPSPIPTPQVTLRRVSW*GFGIEP
Trigger: AGGCTCAATGCCAAAGCCCAACCATGACACTCTACG...GAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp AACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGGAGCTTCTAGGCGTCTaGCCAACCACCAGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: NREQEEKQGLIHSLSSLEELLGV*PTTSRS
Trigger: ACTCCGACTGGTGGTTGGCAAGACGCCTAGAAGCTC...CTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTACGCTCCTACACATTTaGCGGGGAAGTGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLTLLHI*RGSGGG
Trigger: GCCTCCTCCACTTCCCCGCAAAATGTGTAGGAGCGT...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTAGAGGGATCTTCCGCTaGGTCCTTCCTGGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: NTSLSPPEMTGNMFSLLPRGIFR*VLPGKA
Trigger: AGCCTTTCCAGGAAGGACCAAGCGGAAGATCCCTCT...AGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTGGGGGCTTCCAGGACTaGCAGCCAGTCAGTGAATTT +
Preference number: 5 (lower is better)
Translates to: NTSLSPPEMTGNMFSLLPGGFQD*QPVSEF
Trigger: AAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCCC...AGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGCCCCCTTGGGCAATCTaGGTCATGTTGAGCAGACCC +
Preference number: 5 (lower is better)
Translates to: NREQEEKQGLIHSLSSLEPPWAI*VMLSRP
Trigger: GGGTCTGCTCAACATGACCAAGATTGCCCAAGGGGG...CTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp CTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCCGGATGTGCAGGACGTaGCGGCGGCTGGACAGGTGG +
Preference number: 5 (lower is better)
Translates to: LYVLLCWGGMITGNKKRSRMCRT*RRLDRW
Trigger: CCACCTGTCCAGCCGCCGCAACGTCCTGCACATCCG...GCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACAAACACAATTCCCAGGTaGTGGGGTGTCATGCGATTC +
Preference number: 5 (lower is better)
Translates to: GVNPLTFLFREAPSPIPTNTIPR*WGVMRF
Trigger: GAATCGCATGACACCCCACAACCTGGGAATTGTGTT...TGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp GAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAAACACAATTCCCAGGTaGTGGGGTGTCATGCGATTC +
Preference number: 5 (lower is better)
Translates to: EAPSPIPTPQVTLMKIETNTIPR*WGVMRF
Trigger: GAATCGCATGACACCCCACAACCTGGGAATTGTGTT...TGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp TTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAAAGAGGCTGGTGAAGTaGGTGAGCATCAGCTGGACC +
Preference number: 5 (lower is better)
Translates to: FREAPSPIPTPQVTLMKIKRLVK*VSISWT
Trigger: GGTCCAGCTGATGCTCACCAACTTCACCAGCCTCTT...TATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp CAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTAAGAGGCTGGTGAAGTaGGTGAGCATCAGCTGGACC +
Preference number: 5 (lower is better)
Translates to: QEEKQGLIHSLSSLEKLPKRLVK*VSISWT
Trigger: GGTCCAGCTGATGCTCACCAACTTCACCAGCCTCTT...AGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS TCA 90 bp GTGTCATGGTTGGGCTTTGGCATTGAGCCTATTAATTCTTGTATCTaGGAGAGGCACTGCTCTGATTCGGAGAGTGCTTGTCCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: VSWLGFGIEPINSCI*ERHCSDSESACPGC
Trigger: ACAGCCAGGACAAGCACTCTCCGAATCAGAGCAGTGCCTCTCTCAGATACAAGAATTAATAGGCTCAATGCCAAAGCCCAACCATGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550399.5
CDS-3UTR CAA 90 bp ATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTAGGCTGGGGCTCAGATaGTCAGTGCTGACGCTCCTA +
Preference number: 5 (lower is better)
Translates to: IPTPQVTLMKIETVIWEIRLGLR*SVLTLL
Trigger: TAGGAGCGTCAGCACTGACAATCTGAGCCCCAGCCT...AATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTAGAGGGATCTTCCGCTaGGTCCTTCCTGGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLRGIFR*VLPGKA
Trigger: AGCCTTTCCAGGAAGGACCAAGCGGAAGATCCCTCT...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp ACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTGCCCTTTGCCTGAGGTaGCAGGACATCATTGTTCCT +
Preference number: 5 (lower is better)
Translates to: TEHQPLTTRDDRKYVFSSALCLR*QDIIVP
Trigger: AGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGC...AGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACGCAATCTTGGTCATGTaGAGCAGACCCGACTTTTCC +
Preference number: 5 (lower is better)
Translates to: EEKQGLIHSLSSLEKLPHAILVM*SRPDFS
Trigger: GGAAAAGTCGGGTCTGCTCAACATGACCAAGATTGC...GTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCGCAATCTTGGTCATGTaGAGCAGACCCGACTTTTCC +
Preference number: 5 (lower is better)
Translates to: EHQPLTTRDDRKYVFSSSAILVM*SRPDFS
Trigger: GGAAAAGTCGGGTCTGCTCAACATGACCAAGATTGC...GGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGATGAGCCGCTTTAGTTaGTTGCGCACGCGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: NREQEEKQGLIHSLSSLEMSRFS*LRTRFC
Trigger: GCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCAT...CTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATATGAGCCGCTTTAGTTaGTTGCGCACGCGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: HPNTSSHTHEDRDSHLGDMSRFS*LRTRFC
Trigger: GCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCAT...ATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTATGAGCCGCTTTAGTTaGTTGCGCACGCGGTTCTGC +
Preference number: 5 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLMSRFS*LRTRFC
Trigger: GCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCAT...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp ATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACCGTAGAGTGTCATGGTaGGGCTTTGGCATTGAGCCT +
Preference number: 5 (lower is better)
Translates to: MLGRNDNREQEEKQGLIHRRVSW*GFGIEP
Trigger: AGGCTCAATGCCAAAGCCCAACCATGACACTCTACG...GTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGAACACAATTCCCAGGTaGTGGGGTGTCATGCGATTC +
Preference number: 5 (lower is better)
Translates to: PIPTPQVTLMKIETVIWENTIPR*WGVMRF
Trigger: GAATCGCATGACACCCCACAACCTGGGAATTGTGTT...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp AGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCAAGAGGCTGGTGAAGTaGGTGAGCATCAGCTGGACC +
Preference number: 5 (lower is better)
Translates to: RNDNREQEEKQGLIHSLSKRLVK*VSISWT
Trigger: GGTCCAGCTGATGCTCACCAACTTCACCAGCCTCTT...GGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp AAACAGAACACCAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTAAGAGGCTGGTGAAGTaGGTGAGCATCAGCTGGACC +
Preference number: 5 (lower is better)
Translates to: KQNTSLSPPEMTGNMFSLKRLVK*VSISWT
Trigger: GGTCCAGCTGATGCTCACCAACTTCACCAGCCTCTT...AAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTGGTGTTCTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS TCA 90 bp GGTTTCCACGGGAAGCAAAGAGGATATGTGGAAGTTTTAGGGATCTaGAGGGTCTTCCATGTAAGTACCTTGTCCTGGCTGTTCTGGGAA +
Preference number: 5 (lower is better)
Translates to: GFHGKQRGYVEVLGI*RVFHVSTLSWLFWE
Trigger: TTCCCAGAACAGCCAGGACAAGGTACTTACATGGAAGACCCTTCAGATCCCTAAAACTTCCACATATCCTCTTTGCTTCCCGTGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546704.1
CDS CCA 90 bp TCACCCTGCATAAATGCTCCAGGAGGTACCGTAGAGTGTCATGGTTaGGCTTTGGCATTGAGCCTATTAATTCTTGTATCTGAGAGAGGC +
Preference number: 5 (lower is better)
Translates to: SPCINAPGGTVECHG*ALALSLLILVSERG
Trigger: GCCTCTCTCAGATACAAGAATTAATAGGCTCAATGCCAAAGCCCAACCATGACACTCTACGGTACCTCCTGGAGCATTTATGCAGGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000546200.5
ENST00000550130.1
ENST00000550288.6
ENST00000550399.5
ENST00000550440.5
ENST00000552953.5
CDS-3UTR CAA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTGTAGTGGTGGGAGTCTaGAGGTGGACACAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSVVVGV*RWTQEG
Trigger: TCCTTCCTGTGTCCACCTCAAGACTCCCACCACTAC...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393791.8
CDS-3UTR CAA 90 bp CCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAGGATCCCCCAGGAACTaGGCCACCACCGGCTGGATA +
Preference number: 5 (lower is better)
Translates to: PLYVLLCWGGMITGNKKRGSPRN*ATTGWI
Trigger: TATCCAGCCGGTGGTGGCCAAGTTCCTGGGGGATCC...TCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAACCACCAGTCGGAGTaGGTCTTTCGAAGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: NREQEEKQGLIHSLSSLENHQSE*VFRSSR
Trigger: CCTACTGCTTCGAAAGACCAACTCCGACTGGTGGTT...CTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp ATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAAGGAGTCCAGAGCAATaGGCCGGGGATGACGGTAGT +
Preference number: 5 (lower is better)
Translates to: IIMLGRNDNREQEEKQGLRSPEQ*AGDDGS
Trigger: ACTACCGTCATCCCCGGCCAATTGCTCTGGACTCCT...TAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATGCCCTTTGCCTGAGGTaGCAGGACATCATTGTTCCT +
Preference number: 5 (lower is better)
Translates to: HPNTSSHTHEDRDSHLGDALCLR*QDIIVP
Trigger: AGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGC...ATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp ACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGCAATCTTGGTCATGTaGAGCAGACCCGACTTTTCC +
Preference number: 5 (lower is better)
Translates to: THPNTSSHTHEDRDSHLGAILVM*SRPDFS
Trigger: GGAAAAGTCGGGTCTGCTCAACATGACCAAGATTGC...TCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp ACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTTAAAGGGAAGCCGCTTTAGTTTGTaGCGCACGCGGTTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: TSSHTHEDRDSHLGDLKGSRFSL*RTRFCS
Trigger: CGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCT...TCCCTTTAAATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCGTAGAGTGTCATGGTaGGGCTTTGGCATTGAGCCT +
Preference number: 5 (lower is better)
Translates to: REQEEKQGLIHSLSSLEKRRVSW*GFGIEP
Trigger: AGGCTCAATGCCAAAGCCCAACCATGACACTCTACG...CTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp CTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGAACACAATTCCCAGGTaGTGGGGTGTCATGCGATTC +
Preference number: 5 (lower is better)
Translates to: LTHPNTSSHTHEDRDSHLNTIPR*WGVMRF
Trigger: GAATCGCATGACACCCCACAACCTGGGAATTGTGTT...CAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp TTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAAACACAATTCCCAGGTaGTGGGGTGTCATGCGATTC +
Preference number: 5 (lower is better)
Translates to: FREAPSPIPTPQVTLMKINTIPR*WGVMRF
Trigger: GAATCGCATGACACCCCACAACCTGGGAATTGTGTT...TATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGTCAGTCGTTAAGTTCTaGGCTGCAGCACTATCCCAA +
Preference number: 5 (lower is better)
Translates to: PIPTPQVTLMKIETVIWESVVKF*AAALSQ
Trigger: TTGGGATAGTGCTGCAGCCAAGAACTTAACGACTGA...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393797.7
CDS-3UTR CAA 90 bp TGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGAACCACCAGTCGGAGTaGGTCTTTCGAAGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: CIIMLGRNDNREQEEKQGNHQSE*VFRSSR
Trigger: CCTACTGCTTCGAAAGACCAACTCCGACTGGTGGTT...CCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTAACCACCAGTCGGAGTaGGTCTTTCGAAGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSNHQSE*VFRSSR
Trigger: CCTACTGCTTCGAAAGACCAACTCCGACTGGTGGTT...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp TATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGAGCTTCTAGGCGTCTaGCCAACCACCAGTCGGAGT +
Preference number: 5 (lower is better)
Translates to: YVLLCWGGMITGNKKRSRELLGV*PTTSRS
Trigger: ACTCCGACTGGTGGTTGGCAAGACGCCTAGAAGCTC...CCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTGCCCTTTGCCTGAGGTaGCAGGACATCATTGTTCCT +
Preference number: 5 (lower is better)
Translates to: VLLCWGGMITGNKKRSRGALCLR*QDIIVP
Trigger: AGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGC...ACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp GCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAGCCGCTTTAGTTTGTaGCGCACGCGGTTCTGCTCG +
Preference number: 5 (lower is better)
Translates to: ATLCIIMLGRNDNREQEESRFSL*RTRFCS
Trigger: CGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCT...CTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCGGTTGGGCTTTGGCATaGAGCCTATTAATTCTTGTA +
Preference number: 5 (lower is better)
Translates to: KQGLIHSLSSLEKLPHPSGWALA*SLLILV
Trigger: TACAAGAATTAATAGGCTCAATGCCAAAGCCCAACC...GGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp AGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGAACACAATTCCCAGGTaGTGGGGTGTCATGCGATTC +
Preference number: 5 (lower is better)
Translates to: REQEEKQGLIHSLSSLEKNTIPR*WGVMRF
Trigger: GAATCGCATGACACCCCACAACCTGGGAATTGTGTT...CTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS CCA 90 bp CTAGGTGACAGAGCAAGACCCTCTTCTCATTCTCAGCCGATTGTTTaGGTGACTCTTAGGAGGTTCTCTTGTAAGTCTTCTCAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: LGDRARPSSHSQPIV*VTLRRFSCKSSQFF
Trigger: AAAGAACTGAGAAGACTTACAAGAGAACCTCCTAAGAGTCACCCAAACAATCGGCTGAGAATGAGAAGAGGGTCTTGCTCTGTCACCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS-3UTR CAA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGCCAGCACTGTCACCTaGTGGGGCCCATCAGAAGAT +
Preference number: 5 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQASTVT*WGPSED
Trigger: ATCTTCTGATGGGCCCCACAAGGTGACAGTGCTGGC...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000550288.6
CDS-3UTR CAA 90 bp ATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGGAGTCCAGAGCAATaGGCCGGGGATGACGGTAGT +
Preference number: 5 (lower is better)
Translates to: MPLYVLLCWGGMITGNKKRSPEQ*AGDDGS
Trigger: ACTACCGTCATCCCCGGCCAATTGCTCTGGACTCCT...CTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp TATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGAGAGGGATCTTCCGCTaGGTCCTTCCTGGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: YVLLCWGGMITGNKKRSRRGIFR*VLPGKA
Trigger: AGCCTTTCCAGGAAGGACCAAGCGGAAGATCCCTCT...CCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTGCAATCTTGGTCATGTaGAGCAGACCCGACTTTTCC +
Preference number: 5 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSAILVM*SRPDFS
Trigger: GGAAAAGTCGGGTCTGCTCAACATGACCAAGATTGC...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
CDS-3UTR CAA 90 bp AATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAATGTCATGGTTGGGCTTaGGCATTGAGCCTATTAATT +
Preference number: 5 (lower is better)
Translates to: NPLTFLFREAPSPIPTPQCHGWA*ALSLLI
Trigger: AATTAATAGGCTCAATGCCAAAGCCCAACCATGACA...TTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp CCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGTGTCATGGTTGGGCTTaGGCATTGAGCCTATTAATT +
Preference number: 5 (lower is better)
Translates to: PIPTPQVTLMKIETVIWECHGWA*ALSLLI
Trigger: AATTAATAGGCTCAATGCCAAAGCCCAACCATGACA...CTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp ACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATTTAAAGGGACGTAGAGTGTCATGGTaGGGCTTTGGCATTGAGCCT +
Preference number: 5 (lower is better)
Translates to: TSSHTHEDRDSHLGDLKGRRVSW*GFGIEP
Trigger: AGGCTCAATGCCAAAGCCCAACCATGACACTCTACG...TCCCTTTAAATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp GCTCCCTCACCCATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCGATAGAGACAGTCATTaGGGAGATTTAAAGGGATAT +
Preference number: 5 (lower is better)
Translates to: APSPIPTPQVTLMKIETVDRDSH*GDLKGY
Trigger: ATATCCCTTTAAATCTCCCAAATGACTGTCTCTATC...GACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATGGGTGAGGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp CTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGAGGGATCTTCCGCTaGGTCCTTCCTGGAAAGGCT +
Preference number: 5 (lower is better)
Translates to: LYVLLCWGGMITGNKKRSRGIFR*VLPGKA
Trigger: AGCCTTTCCAGGAAGGACCAAGCGGAAGATCCCTCT...GCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp ATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTGTCATGGTTGGGCTTaGGCATTGAGCCTATTAATT +
Preference number: 5 (lower is better)
Translates to: MLGRNDNREQEEKQGLIHCHGWA*ALSLLI
Trigger: AATTAATAGGCTCAATGCCAAAGCCCAACCATGACA...GTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp CATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAAAGAGGCTGGTGAAGTaGGTGAGCATCAGCTGGACC +
Preference number: 5 (lower is better)
Translates to: HATLCIIMLGRNDNREQEKRLVK*VSISWT
Trigger: GGTCCAGCTGATGCTCACCAACTTCACCAGCCTCTT...TTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS TCA 90 bp GTGACAGAGCAAGACCCTCTTCTCATTCTCAGCCGATTGTTTGGGTaGCTCTTAGGAGGTTCTCTTGTAAGTCTTCTCAGTTCTTTTAAT +
Preference number: 5 (lower is better)
Translates to: VTEQDPLLILSRLFG*LLGGSLVSLLSSFN
Trigger: ATTAAAAGAACTGAGAAGACTTACAAGAGAACCTCCTAAGAGTCACCCAAACAATCGGCTGAGAATGAGAAGAGGGTCTTGCTCTGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS-3UTR CAA 90 bp CATGCCACTTTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAAACCACCAGTCGGAGTaGGTCTTTCGAAGCAGTAGG +
Preference number: 5 (lower is better)
Translates to: HATLCIIMLGRNDNREQENHQSE*VFRSSR
Trigger: CCTACTGCTTCGAAAGACCAACTCCGACTGGTGGTT...TTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAAAGTGGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
CDS-3UTR CAA 90 bp CATCCCAACACCTCAAGTCACACTCATGAAGATAGAGACAGTCATTTGGGAGATGGTTGGGCTTTGGCATaGAGCCTATTAATTCTTGTA +
Preference number: 5 (lower is better)
Translates to: HPNTSSHTHEDRDSHLGDGWALA*SLLILV
Trigger: TACAAGAATTAATAGGCTCAATGCCAAAGCCCAACC...ATCTCCCAAATGACTGTCTCTATCTTCATGAGTGTGACTTGAGGTGTTGGGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp AACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGGGTTGGGCTTTGGCATaGAGCCTATTAATTCTTGTA +
Preference number: 5 (lower is better)
Translates to: NREQEEKQGLIHSLSSLEGWALA*SLLILV
Trigger: TACAAGAATTAATAGGCTCAATGCCAAAGCCCAACC...CTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp GTTAATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTGATAGAGACAGTCATTaGGGAGATTTAAAGGGATAT +
Preference number: 5 (lower is better)
Translates to: VNPLTFLFREAPSPIPTPDRDSH*GDLKGY
Trigger: ATATCCCTTTAAATCTCCCAAATGACTGTCTCTATC...AGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATTAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp CAGCCTCTCACCACCAGAGATGACCGGAAATATGTTTTCTCTTCTTCCTTCCCTGATAGAGACAGTCATTaGGGAGATTTAAAGGGATAT +
Preference number: 5 (lower is better)
Translates to: QPLTTRDDRKYVFSSSFPDRDSH*GDLKGY
Trigger: ATATCCCTTTAAATCTCCCAAATGACTGTCTCTATC...AGGGAAGGAAGAAGAGAAAACATATTTCCGGTCATCTCTGGTGGTGAGAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp AATCCACTCACTTTCCTCTTTAGAGAAGCTCCCTCACCCATCCCAACACCTCAAGATAGAGACAGTCATTaGGGAGATTTAAAGGGATAT +
Preference number: 5 (lower is better)
Translates to: NPLTFLFREAPSPIPTPQDRDSH*GDLKGY
Trigger: ATATCCCTTTAAATCTCCCAAATGACTGTCTCTATC...TTGAGGTGTTGGGATGGGTGAGGGAGCTTCTCTAAAGAGGAAAGTGAGTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp AATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTGTCATGGTTGGGCTTaGGCATTGAGCCTATTAATT +
Preference number: 5 (lower is better)
Translates to: NDNREQEEKQGLIHSLSSCHGWA*ALSLLI
Trigger: AATTAATAGGCTCAATGCCAAAGCCCAACCATGACA...AGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp ATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTATGTCATGGTTGGGCTTaGGCATTGAGCCTATTAATT +
Preference number: 5 (lower is better)
Translates to: IIMLGRNDNREQEEKQGLCHGWA*ALSLLI
Trigger: AATTAATAGGCTCAATGCCAAAGCCCAACCATGACA...TAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp AGGGAACAAGAAGAGAAGCAGGGGTTAATCCACTCACTTTCCTCTTTAGAGAAGGATAGAGACAGTCATTaGGGAGATTTAAAGGGATAT +
Preference number: 5 (lower is better)
Translates to: REQEEKQGLIHSLSSLEKDRDSH*GDLKGY
Trigger: ATATCCCTTTAAATCTCCCAAATGACTGTCTCTATC...CTTCTCTAAAGAGGAAAGTGAGTGGATTAACCCCTGCTTCTCTTCTTGTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp ATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGGTTAAGGCACAAGAATCACTaGAACCTCTTCTCATTCTCA +
Preference number: 5 (lower is better)
Translates to: IIMLGRNDNREQEEKQGLRHKNH*NLFSFS
Trigger: TGAGAATGAGAAGAGGTTCAAGTGATTCTTGTGCCT...TAACCCCTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393797.7
CDS TCA 90 bp CAAGAATCACTTGAACCTCTTCTCATTCTCAGCCGATTGTTTGGGTaGCTCTTAGGAGGTTCTCTTGTAAGTCTTCTCAGTTCTTTTAAT +
Preference number: 5 (lower is better)
Translates to: QESLEPLLILSRLFG*LLGGSLVSLLSSFN
Trigger: ATTAAAAGAACTGAGAAGACTTACAAGAGAACCTCCTAAGAGTCACCCAAACAATCGGCTGAGAATGAGAAGAGGTTCAAGTGATTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393797.7
CDS-3UTR CAA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGGTTGGGCTTTGGCATaGAGCCTATTAATTCTTGTA +
Preference number: 5 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQGWALA*SLLILV
Trigger: TACAAGAATTAATAGGCTCAATGCCAAAGCCCAACC...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS-3UTR CAA 90 bp TTATGTATTATTATGTTGGGGAGGAATGATAACAGGGAACAAGAAGAGAAGCAGGATAGAGACAGTCATTaGGGAGATTTAAAGGGATAT +
Preference number: 5 (lower is better)
Translates to: LCIIMLGRNDNREQEEKQDRDSH*GDLKGY
Trigger: ATATCCCTTTAAATCTCCCAAATGACTGTCTCTATC...CTGCTTCTCTTCTTGTTCCCTGTTATCATTCCTCCCCAACATAATAATACATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000550288.6
ENST00000550399.5
CDS TCA 90 bp TCTCTTGTAAGTCTTCTCAGTTCTTTTAATTTTGTTCTCCCACTGTaGCCTTCAGATAATTATGAAGATATCCCAGTTACTTTCAGTCGT +
Preference number: 5 (lower is better)
Translates to: SLVSLLSSFNFVLPL*PSDNYEDIPVTFSR
Trigger: ACGACTGAAAGTAACTGGGATATCTTCATAATTATCTGAAGGTCACAGTGGGAGAACAAAATTAAAAGAACTGAGAAGACTTACAAGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393797.7
CDS CCA 72 bp GTGCGGATGTGCAGGACGTTGCGGCGGCTGGACAGGTaGCGGCCGTGCGCCAGGGCCGCCCCGCGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: VRMCRTLRRLDR*RPCARAAPRRS
Trigger: GGACCTGCGCGGGGCGGCCCTGGCGCACGGCCGCCACCTGTCCAGCCGCCGCAACGTCCTGCACATCCGCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000548139.5
ENST00000550288.6
ENST00000552953.5
CDS CCA 72 bp CAGGGATCGTGCGGATGTGCAGGACGTTGCGGCGGCTaGACAGGTGGCGGCCGTGCGCCAGGGCCGCCCCGC +
Preference number: 6 (lower is better)
Translates to: QGSCGCAGRCGG*TGGGRAPGPPR
Trigger: GCGGGGCGGCCCTGGCGCACGGCCGCCACCTGTCCAGCCGCCGCAACGTCCTGCACATCCGCACGATCCCTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000548139.5
ENST00000550288.6
ENST00000552953.5
CDS GCA 72 bp CGATCCAGCCGCTCGATGACAGTCCGCAGCGCGCGGTaGCAGGCTCGCAGCTCTGTCTCGTGGTCCGACTGC +
Preference number: 6 (lower is better)
Translates to: RSSRSMTVRSAR*QARSSVSWSDC
Trigger: GCAGTCGGACCACGAGACAGAGCTGCGAGCCTGGCACCGCGCGCTGCGGACTGTCATCGAGCGGCTGGATCG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000424809.6
ENST00000430041.6
ENST00000548139.5
ENST00000550288.6
ENST00000552953.5
CDS CCA 72 bp CGCAGCGCGCGGTGCCAGGCTCGCAGCTCTGTCTCGTaGTCCGACTGCAGCAGGAACTCGTGGCCAGGGATC +
Preference number: 6 (lower is better)
Translates to: RSARCQARSSVS*SDCSRNSWPGI
Trigger: GATCCCTGGCCACGAGTTCCTGCTGCAGTCGGACCACGAGACAGAGCTGCGAGCCTGGCACCGCGCGCTGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000548139.5
ENST00000550288.6
ENST00000552953.5
CDS GCA 72 bp GCCGCTTTAGTTTGTTGCGCACGCGGTTCTGCTCGGTaGCTTCGGGCCCCCGAATGGAGCTCCGGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: AALVCCARGSAR*LRAPEWSSGGC
Trigger: GCAGCCGCCGGAGCTCCATTCGGGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000550288.6
ENST00000552953.5
CDS GCA 72 bp CTAACCAGCCGCTCGATGACAGTCCGCAGCGCGCGGTaGCAGGCTCGCAGCTCTGTCTCGTGGTCCGACTGC +
Preference number: 6 (lower is better)
Translates to: LTSRSMTVRSAR*QARSSVSWSDC
Trigger: GCAGTCGGACCACGAGACAGAGCTGCGAGCCTGGCACCGCGCGCTGCGGACTGTCATCGAGCGGCTGGTTAG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000546200.5
CDS CCA 72 bp CAGGAGCTGCGGCAGAGGTCGAGGGGCCTGCAAGGCTaGAGGGTCAAGCTGCGAGGTGCGTTGGCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: QELRQRSRGLQG*RVKLRGALAEA
Trigger: AGCCTCAGCCAACGCACCTCGCAGCTTGACCCTCCAGCCTTGCAGGCCCCTCGACCTCTGCCGCAGCTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000551452.5
ENST00000551574.1
ENST00000552420.5
CDS TCA 72 bp ACCCATCCTGCGCCTCTCGCTCACACTCACCCAGCCTaGGGAGGGCGCTGTCGGCGGTGGCTCTCGGTAGAA +
Preference number: 6 (lower is better)
Translates to: THPAPLAHTHPA*GGRCRRWLSVE
Trigger: TTCTACCGAGAGCCACCGCCGACAGCGCCCTCCTCAGGCTGGGTGAGTGTGAGCGAGAGGCGCAGGATGGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552953.5
CDS GCA 72 bp GCGATGAGCCGCTTTAGTTTGTTGCGCACGCGGTTCTaGTCGGTGCCTTCGGGCCCCCGAATGGAGCTCCGG +
Preference number: 6 (lower is better)
Translates to: AMSRFSLLRTRF*SVPSGPRMELR
Trigger: CCGGAGCTCCATTCGGGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCATCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000550288.6
ENST00000552953.5
CDS GCA 72 bp AGTGGAGAAGCAGGAGGTAAGGTCTCACCGTCTCGCTaGGACTGCGGCGCGGGGGCTTCCAGGACTTGCAGC +
Preference number: 6 (lower is better)
Translates to: SGEAGGKVSPSR*DCGAGASRTCS
Trigger: GCTGCAAGTCCTGGAAGCCCCCGCGCCGCAGTCGCAGCGAGACGGTGAGACCTTACCTCCTGCTTCTCCACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547216.1
ENST00000551000.1
CDS GCA 72 bp GCGATGAGCCGCTTTAGTTTGTTGCGCACGCGGTTCTaGTCGGTGCCTTCGGGCCCCCGAACTGCAGGAGGC +
Preference number: 6 (lower is better)
Translates to: AMSRFSLLRTRF*SVPSGPRTAGG
Trigger: GCCTCCTGCAGTTCGGGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCATCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550440.5
CDS CCA 72 bp GCCTGCAAGGCTGGAGGGTCAAGCTGCGAGGTGCGTTaGCTGAGGCTGAGTGAACCCTGTGGGTCAAGCGGT +
Preference number: 6 (lower is better)
Translates to: ACKAGGSSCEVR*LRLSEPCGSSG
Trigger: ACCGCTTGACCCACAGGGTTCACTCAGCCTCAGCCAACGCACCTCGCAGCTTGACCCTCCAGCCTTGCAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000551452.5
ENST00000551574.1
ENST00000552066.1
CDS CCA 72 bp AGCTCTGTCTCGTGGTCCGACTGCAGCAGGAACTCGTaGCCAGGGATCGTGCGGATGTGCAGGACGTTGCGG +
Preference number: 6 (lower is better)
Translates to: SSVSWSDCSRNS*PGIVRMCRTLR
Trigger: CCGCAACGTCCTGCACATCCGCACGATCCCTGGCCACGAGTTCCTGCTGCAGTCGGACCACGAGACAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000548139.5
ENST00000550288.6
ENST00000552953.5
CDS CAA 72 bp AAGGGCGGTCTCTTCGCGATGAGCCGCTTTAGTTTGTaGCGCACGCGGTTCTGCTCGGTGCCTTCGGGCCCC +
Preference number: 6 (lower is better)
Translates to: KGGLFAMSRFSL*RTRFCSVPSGP
Trigger: GGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCATCGCGAAGAGACCGCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000550288.6
ENST00000550440.5
ENST00000552953.5
CDS CAA 90 bp AGGCTTTGTAAGGGCGGTCTCTTCGCGATGAGCCGCTTTAGTTTGTaGCGCACGCGGTTCTGCTCGGTGCCTTCGGGCCCCCGAATGGAG +
Preference number: 6 (lower is better)
Translates to: RLCKGGLFAMSRFSL*RTRFCSVPSGPRME
Trigger: CTCCATTCGGGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCATCGCGAAGAGACCGCCCTTACAAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000550288.6
ENST00000552953.5
CDS CAA 90 bp TGCAGGCTTTGTAAGGGCGGTCTCTTCGCGATGAGCCGCTTTAGTTaGTTGCGCACGCGGTTCTGCTCGGTGCCTTCGGGCCCCCGAATG +
Preference number: 6 (lower is better)
Translates to: CRLCKGGLFAMSRFS*LRTRFCSVPSGPRM
Trigger: CATTCGGGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCATCGCGAAGAGACCGCCCTTACAAAGCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000550288.6
ENST00000552953.5
CDS CAA 90 bp AGGCTTTGTAAGGGCGGTCTCTTCGCGATGAGCCGCTTTAGTTTGTaGCGCACGCGGTTCTGCTCGGTGCCTTCGGGCCCCCGAACTGCA +
Preference number: 6 (lower is better)
Translates to: RLCKGGLFAMSRFSL*RTRFCSVPSGPRTA
Trigger: TGCAGTTCGGGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCATCGCGAAGAGACCGCCCTTACAAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550440.5
CDS CAA 90 bp TGCAGGCTTTGTAAGGGCGGTCTCTTCGCGATGAGCCGCTTTAGTTaGTTGCGCACGCGGTTCTGCTCGGTGCCTTCGGGCCCCCGAACT +
Preference number: 6 (lower is better)
Translates to: CRLCKGGLFAMSRFS*LRTRFCSVPSGPRT
Trigger: AGTTCGGGGGCCCGAAGGCACCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCATCGCGAAGAGACCGCCCTTACAAAGCCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550440.5
CDS TCA 72 bp AAAGCTGGGCACCGTGTCTCCTTCCCGCTGGCAGAGTaGTTCCAACTGGCAGCCGAACACCTGGTCTCGGAG +
Preference number: 6 (lower is better)
Translates to: KAGHRVSFPLAE*FQLAAEHLVSE
Trigger: CTCCGAGACCAGGTGTTCGGCTGCCAGTTGGAATCACTCTGCCAGCGGGAAGGAGACACGGTGCCCAGCTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000550130.1
ENST00000550288.6
ENST00000550440.5
ENST00000552953.5
CDS TCA 72 bp AACTGGCAGCCGAACACCTGGTCTGGGGAAGTAGAGTaGGGCGGGAAGCCAGTGCCAGCGTCACTCACAGGA +
Preference number: 6 (lower is better)
Translates to: NWQPNTWSGEVE*GGKPVPASLTG
Trigger: TCCTGTGAGTGACGCTGGCACTGGCTTCCCGCCTCACTCTACTTCCCCAGACCAGGTGTTCGGCTGCCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546704.1
CDS TCA 72 bp AAAGCTGGGCACCGTGTCTCCTTCCCGCTGGCAGAGTaGTTCCAACTGGCAGCCGAACACCTGGTCTGGGGA +
Preference number: 6 (lower is better)
Translates to: KAGHRVSFPLAE*FQLAAEHLVWG
Trigger: TCCCCAGACCAGGTGTTCGGCTGCCAGTTGGAATCACTCTGCCAGCGGGAAGGAGACACGGTGCCCAGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546704.1
CDS CCA 72 bp GTCAGTGCTGACGCTCCTACACATTTTGCGGGGAAGTaGAGGAGGCTGCTCCGAGCTAGCCTGAGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: VSADAPTHFAGK*RRLLRASLSPA
Trigger: AGCAGGGCTCAGGCTAGCTCGGAGCAGCCTCCTCCACTTCCCCGCAAAATGTGTAGGAGCGTCAGCACTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552249.1
ENST00000552420.5
CDS CCA 72 bp AGCCGCAAAAAGCTGGGCACCGTGTCTCCTTCCCGCTaGCAGAGTGATTCCAACTGGCAGCCGAACACCTGG +
Preference number: 6 (lower is better)
Translates to: SRKKLGTVSPSR*QSDSNWQPNTW
Trigger: CCAGGTGTTCGGCTGCCAGTTGGAATCACTCTGCCAGCGGGAAGGAGACACGGTGCCCAGCTTTTTGCGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000546704.1
ENST00000550130.1
ENST00000550288.6
ENST00000550440.5
ENST00000552953.5
CDS CAA 72 bp TGTAAGGGCGGTCTCTTCGCGATGAGCCGCTTTAGTTaGTTGCGCACGCGGTTCTGCTCGGTGCCTTCGGGC +
Preference number: 6 (lower is better)
Translates to: CKGGLFAMSRFS*LRTRFCSVPSG
Trigger: GCCCGAAGGCACCGAGCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCATCGCGAAGAGACCGCCCTTACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000550288.6
ENST00000550440.5
ENST00000552953.5
CDS TCA 72 bp GCGGCGCGGGGGCTTCCAGGACTTGCAGCCAGTCAGTaGATTTATGTAGAAGCAGCGTCCAGAGTTGGGGTC +
Preference number: 6 (lower is better)
Translates to: AARGLPGLAASQ*IYVEAASRVGV
Trigger: GACCCCAACTCTGGACGCTGCTTCTACATAAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCCCGCGCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000547216.1
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000550454.5
ENST00000551000.1
ENST00000551452.5
ENST00000551574.1
ENST00000552066.1
ENST00000552420.5
ENST00000552604.5
CDS TCA 72 bp AGGGTCAAGCTGCGAGGTGCGTTGGCTGAGGCTGAGTaGACCCTAGGGGAGAGGATTGGAGAAACAGGTGGG +
Preference number: 6 (lower is better)
Translates to: RVKLRGALAEAE*TLGERIGETGG
Trigger: CCCACCTGTTTCTCCAATCCTCTCCCCTAGGGTTCACTCAGCCTCAGCCAACGCACCTCGCAGCTTGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552420.5
CDS GCA 72 bp TCTCGCTGCGACTGCGGCGCGGGGGCTTCCAGGACTTaGAGCCAGTCAGTGAATTTATGTAGAAGCAGCGTC +
Preference number: 6 (lower is better)
Translates to: SRCDCGAGASRT*SQSVNLCRSSV
Trigger: GACGCTGCTTCTACATAAATTCACTGACTGGCTGCAAGTCCTGGAAGCCCCCGCGCCGCAGTCGCAGCGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000547216.1
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000550454.5
ENST00000551000.1
ENST00000551452.5
ENST00000551574.1
ENST00000552066.1
ENST00000552420.5
ENST00000552604.5
CDS GCA 72 bp GGGAGTCCCCTGAAGACAGAGGTGCTGTCTGTCCTGTaGCTAGAACAGGGCCCAGCTCAGAAGAGCTGTGAC +
Preference number: 6 (lower is better)
Translates to: GSPLKTEVLSVL*LEQGPAQKSCD
Trigger: GTCACAGCTCTTCTGAGCTGGGCCCTGTTCTAGGCACAGGACAGACAGCACCTCTGTCTTCAGGGGACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552066.1
CDS CCA 72 bp CAGGGCCCAGCTCAGAAGAGCTGTGACTCACTGTGCTaGCACTGGCTTCTGACGGCAAGTCTTCCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: QGPAQKSCDSLC*HWLLTASLPGR
Trigger: TCTCCCAGGAAGACTTGCCGTCAGAAGCCAGTGCCAGCACAGTGAGTCACAGCTCTTCTGAGCTGGGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552066.1
CDS CAA 72 bp GGGCTCAGATTGTCAGTGCTGACGCTCCTACACATTTaGCGGGGAAGTGGAGGAGGCTGCTCCGAGCTAGCC +
Preference number: 6 (lower is better)
Translates to: GLRLSVLTLLHI*RGSGGGCSELA
Trigger: GGCTAGCTCGGAGCAGCCTCCTCCACTTCCCCGCAAAATGTGTAGGAGCGTCAGCACTGACAATCTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552249.1
ENST00000552420.5
CDS CAA 90 bp CTGGGACGAAGATGGGTCGAGAGGTGGAGGGAGCTTCTAGGCGTCTaGCCAACCACCAGTCGGAGTTGGTCTTTCGAAGCAGTAGGAACC +
Preference number: 6 (lower is better)
Translates to: LGRRWVERWRELLGV*PTTSRSWSFEAVGT
Trigger: GGTTCCTACTGCTTCGAAAGACCAACTCCGACTGGTGGTTGGCAAGACGCCTAGAAGCTCCCTCCACCTCTCGACCCATCTTCGTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552420.5
CDS TCA 72 bp GCTCCTGCAGGCTTTGTAAGGGCGGTCTCTTCGCGATaGGCCGCTTTAGTTTGTTGCGCACGCGGTTCTGCT +
Preference number: 6 (lower is better)
Translates to: APAGFVRAVSSR*AALVCCARGSA
Trigger: AGCAGAACCGCGTGCGCAACAAACTAAAGCGGCTCATCGCGAAGAGACCGCCCTTACAAAGCCTGCAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000550288.6
ENST00000550440.5
ENST00000552953.5
CDS TCA 72 bp CTGGCTGTTCTGGGAACACATACCTCCCATCGGAGGTaGCCGCACGCTCTCTGTCCACCAGAAAGCGAAGCT +
Preference number: 6 (lower is better)
Translates to: LAVLGTHTSHRR*PHALCPPESEA
Trigger: AGCTTCGCTTTCTGGTGGACAGAGAGCGTGCGGTCACCTCCGATGGGAGGTATGTGTTCCCAGAACAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000546704.1
ENST00000550288.6
ENST00000550399.5
ENST00000550440.5
ENST00000552953.5
CDS TCA 72 bp GGCTACCCGCTGGTCCCTGACAATGAGGGAGGAAACTaGGGCCACGGTGTTGTTTCCTTCACTGCTTCCCTC +
Preference number: 6 (lower is better)
Translates to: GYPLVPDNEGGN*GHGVVSFTASL
Trigger: GAGGGAAGCAGTGAAGGAAACAACACCGTGGCCTCAGTTTCCTCCCTCATTGTCAGGGACCAGCGGGTAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552953.5
CDS CCA 72 bp AGATGGGAGGGATCTCACCTGTGGGTCAAGCGGTTCTaGGGTCCCTGTGTCAGATCTGAAGCCCTTTGCCTG +
Preference number: 6 (lower is better)
Translates to: RWEGSHLWVKRF*GPCVRSEALCL
Trigger: CAGGCAAAGGGCTTCAGATCTGACACAGGGACCCCAGAACCGCTTGACCCACAGGTGAGATCCCTCCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552420.5
CDS CCA 72 bp GGATCTTGGCCTTCACAAAGAAATGGGAGATTCACATaGGGGTCGTCCAGGAGCTGCGGCAGAGGTCGAGGG +
Preference number: 6 (lower is better)
Translates to: GSWPSQRNGRFT*GSSRSCGRGRG
Trigger: CCCTCGACCTCTGCCGCAGCTCCTGGACGACCCCCATGTGAATCTCCCATTTCTTTGTGAAGGCCAAGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546200.5
ENST00000548148.5
ENST00000551574.1
ENST00000552420.5
CDS CCA 72 bp ACCCGACTTTTCCACCTCCTGTGGGTCAAGCGGTTCTaGGGTCCCTGTGTCAGATCTGAAGCCCTTTGCCTG +
Preference number: 6 (lower is better)
Translates to: TRLFHLLWVKRF*GPCVRSEALCL
Trigger: CAGGCAAAGGGCTTCAGATCTGACACAGGGACCCCAGAACCGCTTGACCCACAGGAGGTGGAAAAGTCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550454.5
ENST00000552604.5
CDS CAA 90 bp GAGGTGGAGGGAGCTTCTAGGCGTCTTGCCAACCACCAGTCGGAGTaGGTCTTTCGAAGCAGTAGGAACCTATCCCCTTCAGCCAGAGAC +
Preference number: 6 (lower is better)
Translates to: EVEGASRRLANHQSE*VFRSSRNLSPSARD
Trigger: GTCTCTGGCTGAAGGGGATAGGTTCCTACTGCTTCGAAAGACCAACTCCGACTGGTGGTTGGCAAGACGCCTAGAAGCTCCCTCCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552420.5
CDS CCA 72 bp TCATATAGGCTGCTGGGACGAAGATGGGTCGAGAGGTaGAGGGAGCTTCTAGGCGTCTTGCCAACCACCAGT +
Preference number: 6 (lower is better)
Translates to: SYRLLGRRWVER*RELLGVLPTTS
Trigger: ACTGGTGGTTGGCAAGACGCCTAGAAGCTCCCTCCACCTCTCGACCCATCTTCGTCCCAGCAGCCTATATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552420.5
CDS CCA 72 bp TTCTCCACTGCACAATGTGAGGCTTTCTGGGTGTGCTaGCCCAGCTACTGTAGTCCCAGCTACTTGGGAGCC +
Preference number: 6 (lower is better)
Translates to: FSTAQCEAFWVC*PSYCSPSYLGA
Trigger: GGCTCCCAAGTAGCTGGGACTACAGTAGCTGGGCCAGCACACCCAGAAAGCCTCACATTGTGCAGTGGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS CAA 72 bp AGATGGGTCGAGAGGTGGAGGGAGCTTCTAGGCGTCTaGCCAACCACCAGTCGGAGTTGGTCTTTCGAAGCA +
Preference number: 6 (lower is better)
Translates to: RWVERWRELLGV*PTTSRSWSFEA
Trigger: TGCTTCGAAAGACCAACTCCGACTGGTGGTTGGCAAGACGCCTAGAAGCTCCCTCCACCTCTCGACCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552420.5
CDS CAA 72 bp ACCATGAAACAACTTCGGCCCAGGAGTCCAGAGCAATaGGCCGGGGATGACGGTAGTTGGACTCTGGGAAGG +
Preference number: 6 (lower is better)
Translates to: TMKQLRPRSPEQ*AGDDGSWTLGR
Trigger: CCTTCCCAGAGTCCAACTACCGTCATCCCCGGCCAATTGCTCTGGACTCCTGGGCCGAAGTTGTTTCATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552249.1
ENST00000552420.5
CDS CAA 90 bp CGGTTCTGGGGTCCCTGTGTCAGATCTGAAGCCCTTTGCCTGAGGTaGCAGGACATCATTGTTCCTCTTCAGGGTCTGTGTCCCCTCCAT +
Preference number: 6 (lower is better)
Translates to: RFWGPCVRSEALCLR*QDIIVPLQGLCPLH
Trigger: ATGGAGGGGACACAGACCCTGAAGAGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGACCCCAGAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000547216.1
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000550454.5
ENST00000551452.5
ENST00000551574.1
ENST00000552066.1
ENST00000552420.5
ENST00000552604.5
CDS TCA 72 bp GTGGGTCAAGCGGTTCTGGGGTCCCTGTGTCAGATCTaGAGCCCTTTGCCTGAGGTTGCAGGACATCATTGT +
Preference number: 6 (lower is better)
Translates to: VGQAVLGSLCQI*SPLPEVAGHHC
Trigger: ACAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGACCCCAGAACCGCTTGACCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000547216.1
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000550454.5
ENST00000551452.5
ENST00000551574.1
ENST00000552066.1
ENST00000552420.5
ENST00000552604.5
CDS GCA 72 bp CCTATCCCCTTCAGCCAGAGACACCTGCTGGCCATCTaGCCCAGTATAAGTAAAGGCATAGAGGGCACAGAG +
Preference number: 6 (lower is better)
Translates to: PIPFSQRHLLAI*PSISKGIEGTE
Trigger: CTCTGTGCCCTCTATGCCTTTACTTATACTGGGGCAGATGGCCAGCAGGTGTCTCTGGCTGAAGGGGATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552420.5
CDS GCA 72 bp CTCTCTGTCCACCAGAAAGCGAAGCTTCTGGACCACTaGCAAGTTCCCGCTCACCCGATAAATGCCATCCAC +
Preference number: 6 (lower is better)
Translates to: LSVHQKAKLLDH*QVPAHPINAIH
Trigger: GTGGATGGCATTTATCGGGTGAGCGGGAACTTGGCAGTGGTCCAGAAGCTTCGCTTTCTGGTGGACAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000546704.1
ENST00000550288.6
ENST00000550399.5
ENST00000550440.5
ENST00000552953.5
CDS GCA 72 bp AGCTTCTCCACTGCACAATGTGAGGCTTTCTGGGTGTaGTGGCCCAGCTACTGTAGTCCCAGCTACTTGGGA +
Preference number: 6 (lower is better)
Translates to: SFSTAQCEAFWV*WPSYCSPSYLG
Trigger: TCCCAAGTAGCTGGGACTACAGTAGCTGGGCCAGCACACCCAGAAAGCCTCACATTGTGCAGTGGAGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS CCA 72 bp TCTTCCTGGGAGAGGGATCTTCCGCTTGGTCCTTCCTaGAAAGGCTTCAGAAGGCTGGGGCTCAGATTGTCA +
Preference number: 6 (lower is better)
Translates to: SSWERDLPLGPS*KGFRRLGLRLS
Trigger: TGACAATCTGAGCCCCAGCCTTCTGAAGCCTTTCCAGGAAGGACCAAGCGGAAGATCCCTCTCCCAGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552249.1
ENST00000552420.5
CDS CCA 72 bp TCTCTCAGCTTCTCCACTGCACAATGTGAGGCTTTCTaGGTGTGCTGGCCCAGCTACTGTAGTCCCAGCTAC +
Preference number: 6 (lower is better)
Translates to: SLSFSTAQCEAF*VCWPSYCSPSY
Trigger: GTAGCTGGGACTACAGTAGCTGGGCCAGCACACCCAGAAAGCCTCACATTGTGCAGTGGAGAAGCTGAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393797.7
ENST00000550288.6
CDS CCA 72 bp AGGGTCTTCCATGTAAGTACCTTGTCCTGGCTGTTCTaGGAACACATACCTCCCATCGGAGGTGACCGCACG +
Preference number: 6 (lower is better)
Translates to: RVFHVSTLSWLF*EHIPPIGGDRT
Trigger: CGTGCGGTCACCTCCGATGGGAGGTATGTGTTCCCAGAACAGCCAGGACAAGGTACTTACATGGAAGACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546704.1
CDS TCA 72 bp TCTGGGGTCCCTGTGTCAGATCTGAAGCCCTTTGCCTaGGGTTGCAGGACATCATTGTTCCTCTTCAGGGTC +
Preference number: 6 (lower is better)
Translates to: SGVPVSDLKPFA*GCRTSLFLFRV
Trigger: GACCCTGAAGAGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGACCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000547216.1
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000550454.5
ENST00000551452.5
ENST00000551574.1
ENST00000552066.1
ENST00000552420.5
ENST00000552604.5
CDS GCA 72 bp CGGTTCTGGGGTCCCTGTGTCAGATCTGAAGCCCTTTaGCTGAGGTTGCAGGACATCATTGTTCCTCTTCAG +
Preference number: 6 (lower is better)
Translates to: RFWGPCVRSEAL*LRLQDIIVPLQ
Trigger: CTGAAGAGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGACCCCAGAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000547216.1
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000550454.5
ENST00000551452.5
ENST00000551574.1
ENST00000552066.1
ENST00000552420.5
ENST00000552604.5
CDS GCA 72 bp TTCTCTGTCCACCAGAAAGCGAAGCTTCTGGACCACTaGCAAGTTCCCGCTCACCCGATAAATGCCATCCAC +
Preference number: 6 (lower is better)
Translates to: FSVHQKAKLLDH*QVPAHPINAIH
Trigger: GTGGATGGCATTTATCGGGTGAGCGGGAACTTGGCAGTGGTCCAGAAGCTTCGCTTTCTGGTGGACAGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550130.1
CDS CCA 72 bp GAGCTTCTAGGCGTCTTGCCAACCACCAGTCGGAGTTaGTCTTTCGAAGCAGTAGGAACCTATCCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: ELLGVLPTTSRS*SFEAVGTYPLQ
Trigger: CTGAAGGGGATAGGTTCCTACTGCTTCGAAAGACCAACTCCGACTGGTGGTTGGCAAGACGCCTAGAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552420.5
CDS CCA 72 bp TTTTATCCACAGCAGCAATGCAGAGCCGCAAAAAGCTaGGCACCGTGTCTCCTTCCCGCTGGCAGAGTGATT +
Preference number: 6 (lower is better)
Translates to: FYPQQQCRAAKS*APCLLPAGRVI
Trigger: AATCACTCTGCCAGCGGGAAGGAGACACGGTGCCCAGCTTTTTGCGGCTCTGCATTGCTGCTGTGGATAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000546704.1
ENST00000550130.1
ENST00000550288.6
ENST00000550440.5
ENST00000552953.5
CDS CCA 72 bp GGTGGGGATGAGGACAACCCTCCCAGGAATAGTACATaGGGGTTTCCACGGGAAGCAAAGAGGATATGTGGA +
Preference number: 6 (lower is better)
Translates to: GGDEDNPPRNST*GFPREAKRICG
Trigger: TCCACATATCCTCTTTGCTTCCCGTGGAAACCCCCATGTACTATTCCTGGGAGGGTTGTCCTCATCCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546704.1
CDS CCA 72 bp TTCAGGGTCTGTGTCCCCTCCATGGAGCCAGGGTTCTaGGTTAGGGGAGGAGGAAATAAAGCTACATCCAGA +
Preference number: 6 (lower is better)
Translates to: FRVCVPSMEPGF*VRGGGNKATSR
Trigger: TCTGGATGTAGCTTTATTTCCTCCTCCCCTAACCCAGAACCCTGGCTCCATGGAGGGGACACAGACCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547216.1
ENST00000551000.1
CDS CAA 72 bp GGAGCTTCTAGGCGTCTTGCCAACCACCAGTCGGAGTaGGTCTTTCGAAGCAGTAGGAACCTATCCCCTTCA +
Preference number: 6 (lower is better)
Translates to: GASRRLANHQSE*VFRSSRNLSPS
Trigger: TGAAGGGGATAGGTTCCTACTGCTTCGAAAGACCAACTCCGACTGGTGGTTGGCAAGACGCCTAGAAGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552420.5
CDS CAA 72 bp GGTCCCTGTGTCAGATCTGAAGCCCTTTGCCTGAGGTaGCAGGACATCATTGTTCCTCTTCAGGGTCTGTGT +
Preference number: 6 (lower is better)
Translates to: GPCVRSEALCLR*QDIIVPLQGLC
Trigger: ACACAGACCCTGAAGAGGAACAATGATGTCCTGCAACCTCAGGCAAAGGGCTTCAGATCTGACACAGGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000547216.1
ENST00000548139.5
ENST00000548148.5
ENST00000550288.6
ENST00000550454.5
ENST00000551452.5
ENST00000551574.1
ENST00000552066.1
ENST00000552420.5
ENST00000552604.5
CDS TCA 72 bp AATTCCCAGGTTGTGGGGTGTCATGCGATTCTTATCTaGGTGTGCTATCACCCAAGGGCAGCACGGAAATGG +
Preference number: 6 (lower is better)
Translates to: NSQVVGCHAILI*VCYHPRAARKW
Trigger: CCATTTCCGTGCTGCCCTTGGGTGATAGCACACTCAGATAAGAATCGCATGACACCCCACAACCTGGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424809.6
CDS GCA 72 bp CATCCACATCTAGACCTCTTTTATCCACAGCAGCAATaGAGAGCCGCAAAAAGCTGGGCACCGTGTCTCCTT +
Preference number: 6 (lower is better)
Translates to: HPHLDLFYPQQQ*RAAKSWAPCLL
Trigger: AAGGAGACACGGTGCCCAGCTTTTTGCGGCTCTGCATTGCTGCTGTGGATAAAAGAGGTCTAGATGTGGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000430041.6
ENST00000546200.5
ENST00000546704.1
ENST00000550130.1
ENST00000550288.6
ENST00000550399.5
ENST00000550440.5
ENST00000552953.5
CDS GCA 72 bp GGAAGGGCTGGGCAAGTCACATCTCTAGAGGAGACCTaGTGTAGCCTATCAGGCAAGCAGAACACAGAAAAA +
Preference number: 6 (lower is better)
Translates to: GRAGQVTSLEET*CSLSGKQNTEK
Trigger: TTTTTCTGTGTTCTGCTTGCCTGATAGGCTACAGCAGGTCTCCTCTAGAGATGTGACTTGCCCAGCCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430041.6
CDS CCA 72 bp AGGAGTCCAGAGCAATTGGCCGGGGATGACGGTAGTTaGACTCTGGGAAGGGATGGATTCCTCTATCATATA +
Preference number: 6 (lower is better)
Translates to: RSPEQLAGDDGS*TLGRDGFLYHI
Trigger: TATATGATAGAGGAATCCATCCCTTCCCAGAGTCCAACTACCGTCATCCCCGGCCAATTGCTCTGGACTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000424809.6
ENST00000550288.6
ENST00000552249.1
ENST00000552420.5
CDS CAA 90 bp ACATCCAGATGCCACCTCTACCCACTCTCCACACCCTTCTTATACTaGGCTGATTCTTCTGATCTTCTGAGAGCCCCGGAGAGAAAACAC +
Preference number: 6 (lower is better)
Translates to: TSRCHLYPLSTPFLY*ADSSDLLRAPERKH
Trigger: GTGTTTTCTCTCCGGGGCTCTCAGAAGATCAGAAGAATCAGCCAAGTATAAGAAGGGTGTGGAGAGTGGGTAGAGGTGGCATCTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000547216.1
ENST00000551000.1
CDS TCA 72 bp TTGGGCTTTGGCATTGAGCCTATTAATTCTTGTATCTaGGAGAGGCACTGCAAGGGCAGCACGGAAATGGGG +
Preference number: 6 (lower is better)
Translates to: LGFGIEPINSCI*ERHCKGSTEMG
Trigger: CCCCATTTCCGTGCTGCCCTTGCAGTGCCTCTCTCAGATACAAGAATTAATAGGCTCAATGCCAAAGCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS CAA 90 bp AGAAGATTCAGGAGCAGGAGTTGGTCCTGGGTAGTGGTGGGAGTCTaGAGGTGGACACAGGAAGGAGATAAGAAGAAAGAATCAGGTTCA +
Preference number: 6 (lower is better)
Translates to: RRFRSRSWSWVVVGV*RWTQEGDKKKESGS
Trigger: TGAACCTGATTCTTTCTTCTTATCTCCTTCCTGTGTCCACCTCAAGACTCCCACCACTACCCAGGACCAACTCCTGCTCCTGAATCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393791.8
ENST00000552249.1
ENST00000552420.5
CDS CAA 90 bp AATGCTCCAGGAGGTACCGTAGAGTGTCATGGTTGGGCTTTGGCATaGAGCCTATTAATTCTTGTATCTGAGAGAGGCACTGCAAGGGCA +
Preference number: 6 (lower is better)
Translates to: NAPGGTVECHGWALA*SLLILVSERGTARA
Trigger: TGCCCTTGCAGTGCCTCTCTCAGATACAAGAATTAATAGGCTCAATGCCAAAGCCCAACCATGACACTCTACGGTACCTCCTGGAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS CAA 90 bp AATGCTCCAGGAGGTACCGTAGAGTGTCATGGTTGGGCTTTGGCATaGAGCCTATTAATTCTTGTATCTGAGAGAGGCACTGCTCTGATT +
Preference number: 6 (lower is better)
Translates to: NAPGGTVECHGWALA*SLLILVSERGTALI
Trigger: AATCAGAGCAGTGCCTCTCTCAGATACAAGAATTAATAGGCTCAATGCCAAAGCCCAACCATGACACTCTACGGTACCTCCTGGAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000546200.5
ENST00000550130.1
ENST00000550399.5
ENST00000550440.5
ENST00000552953.5
CDS CAA 90 bp TGCATAAATGCTCCAGGAGGTACCGTAGAGTGTCATGGTTGGGCTTaGGCATTGAGCCTATTAATTCTTGTATCTGAGAGAGGCACTGCT +
Preference number: 6 (lower is better)
Translates to: CINAPGGTVECHGWA*ALSLLILVSERGTA
Trigger: AGCAGTGCCTCTCTCAGATACAAGAATTAATAGGCTCAATGCCAAAGCCCAACCATGACACTCTACGGTACCTCCTGGAGCATTTATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000546200.5
ENST00000550130.1
ENST00000550399.5
ENST00000550440.5
ENST00000552953.5
CDS CAA 90 bp TGCATAAATGCTCCAGGAGGTACCGTAGAGTGTCATGGTTGGGCTTaGGCATTGAGCCTATTAATTCTTGTATCTGAGAGAGGCACTGCA +
Preference number: 6 (lower is better)
Translates to: CINAPGGTVECHGWA*ALSLLILVSERGTA
Trigger: TGCAGTGCCTCTCTCAGATACAAGAATTAATAGGCTCAATGCCAAAGCCCAACCATGACACTCTACGGTACCTCCTGGAGCATTTATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS TCA 72 bp TTGGGCTTTGGCATTGAGCCTATTAATTCTTGTATCTaGGAGAGGCACTGCTCTGATTCGGAGAGTGCAAGG +
Preference number: 6 (lower is better)
Translates to: LGFGIEPINSCI*ERHCSDSESAR
Trigger: CCTTGCACTCTCCGAATCAGAGCAGTGCCTCTCTCAGATACAAGAATTAATAGGCTCAATGCCAAAGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000546200.5
ENST00000550130.1
ENST00000550440.5
ENST00000552953.5
CDS TCA 72 bp GGGAAGCAAAGAGGATATGTGGAAGTTTTAGGGATCTaGAGGGTCTTCCATGTAAGTACCTTGTCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: GKQRGYVEVLGI*RVFHVSTLSWL
Trigger: CAGCCAGGACAAGGTACTTACATGGAAGACCCTTCAGATCCCTAAAACTTCCACATATCCTCTTTGCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546704.1
CDS CAA 72 bp GGAGGTACCGTAGAGTGTCATGGTTGGGCTTTGGCATaGAGCCTATTAATTCTTGTATCTGAGAGAGGCACT +
Preference number: 6 (lower is better)
Translates to: GGTVECHGWALA*SLLILVSERGT
Trigger: AGTGCCTCTCTCAGATACAAGAATTAATAGGCTCAATGCCAAAGCCCAACCATGACACTCTACGGTACCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000546200.5
ENST00000550130.1
ENST00000550288.6
ENST00000550399.5
ENST00000550440.5
ENST00000552953.5
CDS CAA 72 bp GCTCCAGGAGGTACCGTAGAGTGTCATGGTTGGGCTTaGGCATTGAGCCTATTAATTCTTGTATCTGAGAGA +
Preference number: 6 (lower is better)
Translates to: APGGTVECHGWA*ALSLLILVSER
Trigger: TCTCTCAGATACAAGAATTAATAGGCTCAATGCCAAAGCCCAACCATGACACTCTACGGTACCTCCTGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000546200.5
ENST00000550130.1
ENST00000550288.6
ENST00000550399.5
ENST00000550440.5
ENST00000552953.5
CDS CAA 90 bp CAGATAATTATGAAGATATCCCAGTTACTTTCAGTCGTTAAGTTCTaGGCTGCAGCACTATCCCAATACCACCACCTCCTCTGCAGTCCC +
Preference number: 6 (lower is better)
Translates to: QIIMKISQLLSVVKF*AAALSQYHHLLCSP
Trigger: GGGACTGCAGAGGAGGTGGTGGTATTGGGATAGTGCTGCAGCCAAGAACTTAACGACTGAAAGTAACTGGGATATCTTCATAATTATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393797.7
CDS TCA 72 bp CAAGACCCTCTTCTCATTCTCAGCCGATTGTTTGGGTaGCTCTTAGGAGGTTCTCTTGTAAGTCTTCTCAGT +
Preference number: 6 (lower is better)
Translates to: QDPLLILSRLFG*LLGGSLVSLLS
Trigger: ACTGAGAAGACTTACAAGAGAACCTCCTAAGAGTCACCCAAACAATCGGCTGAGAATGAGAAGAGGGTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS TCA 72 bp TTGGGCTTTGGCATTGAGCCTATTAATTCTTGTATCTaGGAGAGGCACTGCTCTGATTCGGAGAGTGCTTGT +
Preference number: 6 (lower is better)
Translates to: LGFGIEPINSCI*ERHCSDSESAC
Trigger: ACAAGCACTCTCCGAATCAGAGCAGTGCCTCTCTCAGATACAAGAATTAATAGGCTCAATGCCAAAGCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550399.5
CDS CCA 72 bp CTGCATAAATGCTCCAGGAGGTACCGTAGAGTGTCATaGTTGGGCTTTGGCATTGAGCCTATTAATTCTTGT +
Preference number: 6 (lower is better)
Translates to: LHKCSRRYRRVS*LGFGIEPINSC
Trigger: ACAAGAATTAATAGGCTCAATGCCAAAGCCCAACCATGACACTCTACGGTACCTCCTGGAGCATTTATGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000546200.5
ENST00000550130.1
ENST00000550288.6
ENST00000550399.5
ENST00000550440.5
ENST00000552953.5
CDS CCA 72 bp AGAGCAAGACCCTCTTCTCATTCTCAGCCGATTGTTTaGGTGACTCTTAGGAGGTTCTCTTGTAAGTCTTCT +
Preference number: 6 (lower is better)
Translates to: RARPSSHSQPIV*VTLRRFSCKSS
Trigger: AGAAGACTTACAAGAGAACCTCCTAAGAGTCACCCAAACAATCGGCTGAGAATGAGAAGAGGGTCTTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550288.6
CDS CAA 72 bp ATGAAGATATCCCAGTTACTTTCAGTCGTTAAGTTCTaGGCTGCAGCACTATCCCAATACCACCACCTCCTC +
Preference number: 6 (lower is better)
Translates to: MKISQLLSVVKF*AAALSQYHHLL
Trigger: GAGGAGGTGGTGGTATTGGGATAGTGCTGCAGCCAAGAACTTAACGACTGAAAGTAACTGGGATATCTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393797.7
CDS TCA 72 bp CTTGAACCTCTTCTCATTCTCAGCCGATTGTTTGGGTaGCTCTTAGGAGGTTCTCTTGTAAGTCTTCTCAGT +
Preference number: 6 (lower is better)
Translates to: LEPLLILSRLFG*LLGGSLVSLLS
Trigger: ACTGAGAAGACTTACAAGAGAACCTCCTAAGAGTCACCCAAACAATCGGCTGAGAATGAGAAGAGGTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393797.7
CDS CAA 72 bp CATAAATGCTCCAGGAGGTACCGTAGAGTGTCATGGTaGGGCTTTGGCATTGAGCCTATTAATTCTTGTATC +
Preference number: 6 (lower is better)
Translates to: HKCSRRYRRVSW*GFGIEPINSCI
Trigger: GATACAAGAATTAATAGGCTCAATGCCAAAGCCCAACCATGACACTCTACGGTACCTCCTGGAGCATTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000546200.5
ENST00000550130.1
ENST00000550288.6
ENST00000550399.5
ENST00000550440.5
ENST00000552953.5
CDS CCA 72 bp ATAAATGCTCCAGGAGGTACCGTAGAGTGTCATGGTTaGGCTTTGGCATTGAGCCTATTAATTCTTGTATCT +
Preference number: 6 (lower is better)
Translates to: INAPGGTVECHG*ALALSLLILVS
Trigger: AGATACAAGAATTAATAGGCTCAATGCCAAAGCCCAACCATGACACTCTACGGTACCTCCTGGAGCATTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000393791.8
ENST00000393797.7
ENST00000430041.6
ENST00000546200.5
ENST00000550130.1
ENST00000550288.6
ENST00000550399.5
ENST00000550440.5
ENST00000552953.5