RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP40 (Homo sapiens)

Ensembl gene IDs: ENSG00000124143

Ensembl transcript IDs: ENST00000243967.8, ENST00000373345.8, ENST00000373346.7, ENST00000414158.1

Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAGCTTaGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGGGTGGAGGGGAG +
Preference number: 1 (lower is better)
Translates to: HGDPSAPSGGVIQQA*CRKQLSGGLEGGGE
Trigger: CTCCCCTCCACCCTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGCGCTTGGATCTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
3UTR TCA 90 bp CCCACCCTTCAGCAATGGGTATCATTACTCCATGCCTCCCCATTCTaGGTTCTCTTCCTGCCCTCCCGCCCCCGGTGGTTGTGGGTTCAA +
Preference number: 1 (lower is better)
Translates to: PTLQQWVSLLHASPF*VLFLPSRPRWLWVQ
Trigger: TTGAACCCACAACCACCGGGGGCGGGAGGGCAGGAAGAGAACTCAGAATGGGGAGGCATGGAGTAATGATACCCATTGCTGAAGGGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414158.1
3UTR-3UTR GCA 90 bp CCTGCCCTCCCGCCCCCGGTGGTTGTGGGTTCAAGGCGTGGCTGGATCACATGGAGCAGCTCAGCAAGATaGTCTCGTCACCAAGCTCCC +
Preference number: 2 (lower is better)
Translates to: PALPPPVVVGSRRGWITWSSSAR*SRHQAP
Trigger: GGGAGCTTGGTGACGAGAGCATCTTGCTGAGCTGCT...CCATGTGATCCAGCCACGCCTTGAACCCACAACCACCGGGGGCGGGAGGGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414158.1
3UTR-3UTR CCA 90 bp CCCTGCAATGCCCCCACCCTTCAGCAATGGGTATCATTACTCCATGCCTCCCCACGCCCCCGGTGGTTGTaGGTTCAAGGCGTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: PCNAPTLQQWVSLLHASPRPRWL*VQGVAG
Trigger: TCCAGCCACGCCTTGAACCCACAACCACCGGGGGCG...TGGGGAGGCATGGAGTAATGATACCCATTGCTGAAGGGTGGGGGCATTGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000414158.1
3UTR-3UTR TCA 90 bp CCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCGAGGGTGGAGGGGAGTaGGGGCATTGTGTGCACGGT +
Preference number: 2 (lower is better)
Translates to: PSAPSGGVIQQAWCRKQLEGGGE*GHCVHG
Trigger: ACCGTGCACACAATGCCCTCACTCCCCTCCACCCTC...GAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGCGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
3UTR-3UTR CCA 90 bp GGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGCTCATGCTGGGTACATaGACACAGAGCCAGCAGGGG +
Preference number: 2 (lower is better)
Translates to: GGVIQQAWCRKQLSGGLELMLGT*TQSQQG
Trigger: CCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAG...CTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
3UTR-3UTR CCA 90 bp GTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCCAGAAAAGGAAGCCTTaGAATAAAACTCAGACCCTC +
Preference number: 2 (lower is better)
Translates to: VWKPQTEAHGDPSAPSGGQKRKP*NKTQTL
Trigger: GAGGGTCTGAGTTTTATTCCAAGGCTTCCTTTTCTG...GCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
3UTR-3UTR CCA 90 bp TCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGGTCATACAGCAAGCTTaGTGTAGGAAGCAACTCTCT +
Preference number: 2 (lower is better)
Translates to: SSSLEATDRSPWRSKRPKVIQQA*CRKQLS
Trigger: AGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGAC...CTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
3UTR-3UTR CCA 90 bp GTAAACTCATTGTTAAGTGAACAAATAAGCGAAGCCTCACCTGGCCTGAGGATACCCTCCCGCCCCCGGTaGTTGTGGGTTCAAGGCGTG +
Preference number: 2 (lower is better)
Translates to: VNSLLSEQISEASPGLRIPSRPR*LWVQGV
Trigger: CACGCCTTGAACCCACAACCACCGGGGGCGGGAGGG...TATCCTCAGGCCAGGTGAGGCTTCGCTTATTTGTTCACTTAACAATGAGTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414158.1
3UTR-3UTR GCA 90 bp GTAAACTCATTGTTAAGTGAACAAATAAGCGAAGCCTCACCTGGCCTGAGGATACAGAGAGGCTGTCCCTaGAATGCCCCCACCCTTCAG +
Preference number: 2 (lower is better)
Translates to: VNSLLSEQISEASPGLRIQRGCP*NAPTLQ
Trigger: CTGAAGGGTGGGGGCATTGCAGGGACAGCCTCTCTG...TATCCTCAGGCCAGGTGAGGCTTCGCTTATTTGTTCACTTAACAATGAGTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414158.1
3UTR-3UTR GCA 90 bp GTAAACTCATTGTTAAGTGAACAAATAAGCGAAGCCTCACCTGGCCTGAGGATAAGGCTGTCCCTGCAATaGCCCCACCCTTCAGCAATG +
Preference number: 2 (lower is better)
Translates to: VNSLLSEQISEASPGLRIRLSLQ*PHPSAM
Trigger: CATTGCTGAAGGGTGGGGGCATTGCAGGGACAGCCT...TATCCTCAGGCCAGGTGAGGCTTCGCTTATTTGTTCACTTAACAATGAGTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414158.1
3UTR-3UTR GCA 90 bp TCTGGTGCTGCTGCTACTACACATTGTAGGGCCACTTTCGAAACAATTTTGCCTATAGCTTTGTTCTCATaGTGGGTACATGGACACAGA +
Preference number: 2 (lower is better)
Translates to: SGAAATTHCRATFETILPIALFS*WVHGHR
Trigger: TCTGTGTCCATGTACCCAGCATGAGAACAAAGCTAT...AGGCAAAATTGTTTCGAAAGTGGCCCTACAATGTGTAGTAGCAGCAGCACCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
3UTR CCA 72 bp CCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAGCTTaGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGGGT +
Preference number: 3 (lower is better)
Translates to: PSAPSGGVIQQA*CRKQLSGGLEG
Trigger: ACCCTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGCGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
3UTR TCA 72 bp CAGCAATGGGTATCATTACTCCATGCCTCCCCATTCTaGGTTCTCTTCCTGCCCTCCCGCCCCCGGTGGTTG +
Preference number: 3 (lower is better)
Translates to: QQWVSLLHASPF*VLFLPSRPRWL
Trigger: CAACCACCGGGGGCGGGAGGGCAGGAAGAGAACTCAGAATGGGGAGGCATGGAGTAATGATACCCATTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414158.1
3UTR-3UTR CAA 90 bp TTCAGCAATGGGTATCATTACTCCATGCCTCCCCATTCTGAGTTCTCTTCCTGCTCCCGCCCCCGGTGGTaGTGGGTTCAAGGCGTGGCT +
Preference number: 3 (lower is better)
Translates to: FSNGYHYSMPPHSEFSSCSRPRW*WVQGVA
Trigger: AGCCACGCCTTGAACCCACAACCACCGGGGGCGGGA...GCAGGAAGAGAACTCAGAATGGGGAGGCATGGAGTAATGATACCCATTGCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414158.1
3UTR GCA 72 bp AAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATaGTGGGTACATGGACACAGAGCCAGCAGGGGAGAG +
Preference number: 3 (lower is better)
Translates to: KLRPSPGIALFS*WVHGHRASRGE
Trigger: CTCTCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
3UTR-3UTR CAA 90 bp TTTCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCATCCCCTGGAATAGCTTaGTTCTCATGCTGGGTACAT +
Preference number: 3 (lower is better)
Translates to: FPPVWKPQTEAHGDPSAPSPGIA*FSCWVH
Trigger: ATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGA...TGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
3UTR-3UTR CAA 90 bp GCTCTCCTGGTTTTGTCTCTGGTGCTGCTGCTACTACACATTGTAGGGCCACTTGACCCCAACTACCTCTaGATAAAGGTACTGCATTTT +
Preference number: 3 (lower is better)
Translates to: ALLVLSLVLLLLHIVGPLDPNYL*IKVLHF
Trigger: AAAATGCAGTACCTTTATCAAGAGGTAGTTGGGGTC...AAGTGGCCCTACAATGTGTAGTAGCAGCAGCACCAGAGACAAAACCAGGAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp GCCCTCCCGCCCCCGGTGGTTGTGGGTTCAAGGCGTGGCTGGATCACATGGGCCCCCTCCCGCCCCCGGTaGTTGTGGGTTCAAGGCGTG +
Preference number: 4 (lower is better)
Translates to: ALPPPVVVGSRRGWITWAPSRPR*LWVQGV
Trigger: CACGCCTTGAACCCACAACCACCGGGGGCGGGAGGG...GGCCCATGTGATCCAGCCACGCCTTGAACCCACAACCACCGGGGGCGGGAGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR GCA 90 bp TCCTGCCCTCCCGCCCCCGGTGGTTGTGGGTTCAAGGCGTGGCTGGATCACATGTCTGAGTTCTCTTCCTaGCCTCCCGCCCCCGGTGGT +
Preference number: 4 (lower is better)
Translates to: SCPPAPGGCGFKAWLDHMSEFSS*PPAPGG
Trigger: ACCACCGGGGGCGGGAGGGCAGGAAGAGAACTCAGA...CATGTGATCCAGCCACGCCTTGAACCCACAACCACCGGGGGCGGGAGGGCAGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR CCA 90 bp CGCCCCCGGTGGTTGTGGGTTCAAGGCGTGGCTGGATCACATGGGCCAGAGCCCGGTTCAAGGCGTGGCTaGATCACATGGGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RPRWLWVQGVAGSHGPEPGSRRG*ITWARA
Trigger: GGCTCTGGCCCATGTGATCCAGCCACGCCTTGAACC...GGGCTCTGGCCCATGTGATCCAGCCACGCCTTGAACCCACAACCACCGGGGGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR GCA 90 bp AGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGTGCCCCAGGCAGAGGTaGCTCCCCGGGATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SLEATDRSPWRSKRPKWWCPRQR*LPGMAC
Trigger: GCAGGCCATCCCGGGGAGGCACCTCTGCCTGGGGCA...CCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp CCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCCGCAGCGCCTGGCAATaGGGGCCCGCGGGATCCGAG +
Preference number: 4 (lower is better)
Translates to: PSAPSGGVIQQAWCRKQLRSAWQ*GPAGSE
Trigger: CTCGGATCCCGCGGGCCCGCATTGCCAGGCGCTGCG...GAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGCGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp GCCCTCCCGCCCCCGGTGGTTGTGGGTTCAAGGCGTGGCTGGATCACATGGGCCCCCACGTCAACTCGCTaGAAGGACAACACCTACCGA +
Preference number: 4 (lower is better)
Translates to: ALPPPVVVGSRRGWITWAPTSTR*KDNTYR
Trigger: TCGGTAGGTGTTGTCCTTCCAGCGAGTTGACGTGGG...GGCCCATGTGATCCAGCCACGCCTTGAACCCACAACCACCGGGGGCGGGAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR CCA 90 bp CCCATTCTGAGTTCTCTTCCTGCCCTCCCGCCCCCGGTGGTTGTGGGTTCAAGGCGCCCCCGGTGGTTGTaGGTTCAAGGCGTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PILSSLPALPPPVVVGSRRPRWL*VQGVAG
Trigger: TCCAGCCACGCCTTGAACCCACAACCACCGGGGGCG...CCTTGAACCCACAACCACCGGGGGCGGGAGGGCAGGAAGAGAACTCAGAATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR TCA 90 bp CCTCCCGCCCCCGGTGGTTGTGGGTTCAAGGCGTGGCTGGATCACATGGGCCAGTGGGACTGTAGGAGATaGGAGGATTCCCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PPAPGGCGFKAWLDHMGQWDCRR*EDSQRG
Trigger: GCCTCTCTGGGAATCCTCTCATCTCCTACAGTCCCA...CTGGCCCATGTGATCCAGCCACGCCTTGAACCCACAACCACCGGGGGCGGGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR GCA 90 bp GTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCCCAAGTCTTGAGGCCTaGGTCGCAGAGCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: VWKPQTEAHGDPSAPSGGPSLEA*VAELGA
Trigger: CGCCCCCAGCTCTGCGACGCAGGCCTCAAGACTTGG...GCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp GGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGAGGAGGGGCCAGAGCTaGAGCCCAGGTCGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GGVIQQAWCRKQLSGGLERRGQS*SPGRPS
Trigger: GCTGGGCCGACCTGGGCTGCAGCTCTGGCCCCTCCT...CTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp CGCCCCCGGTGGTTGTGGGTTCAAGGCGTGGCTGGATCACATGGGCCAGAGCCCAGCAGCTCAGCAAGATaGTCTCGTCACCAAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RPRWLWVQGVAGSHGPEPSSSAR*SRHQAP
Trigger: GGGAGCTTGGTGACGAGAGCATCTTGCTGAGCTGCT...GGGCTCTGGCCCATGTGATCCAGCCACGCCTTGAACCCACAACCACCGGGGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR CCA 90 bp GTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGCCCCGGAACTGAGCTaGGCCCCCTTCATACCGGAG +
Preference number: 4 (lower is better)
Translates to: VWKPQTEAHGDPSAPSGGAPELS*APFIPE
Trigger: CTCCGGTATGAAGGGGGCCCAGCTCAGTTCCGGGGC...GCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp AGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCCTGCGTCGCAGAGCTaGGGGCGCCTGCTGCTACTG +
Preference number: 4 (lower is better)
Translates to: SLEATDRSPWRSKRPKWWPASQS*GRLLLL
Trigger: CAGTAGCAGCAGGCGCCCCCAGCTCTGCGACGCAGG...CCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp GTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCCGCCTTGTCCCTGTCTaGGTGCATCCTCCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VWKPQTEAHGDPSAPSGGRLVPV*VHPPQP
Trigger: TGGCTGCGGAGGATGCACGCAGACAGGGACAAGGCG...GCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp TCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGCCTTTGGGGAGCTTaGGGGGCCGCCCTTGGTGCA +
Preference number: 4 (lower is better)
Translates to: SSSLEATDRSPWRSKRPKCLWGA*GAALGA
Trigger: TGCACCAAGGGCGGCCCCCCAAGCTCCCCAAAGGCA...CTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp TTTCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCACCTGCGTCGCAGAGCTaGGGGCGCCTGCTGCTACTG +
Preference number: 4 (lower is better)
Translates to: FPPVWKPQTEAHGDPSAPPASQS*GRLLLL
Trigger: CAGTAGCAGCAGGCGCCCCCAGCTCTGCGACGCAGG...TGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR TCA 90 bp TCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGCTGATCCATTCGGCCTaGGGAGGGGCCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSSLEATDRSPWRSKRPKLIHSA*GGARAA
Trigger: TGCAGCTCTGGCCCCTCCTCAGGCCGAATGGATCAG...CTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp TTTCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAGGGGGCCGCCCTTGGTaGAGAAAGAGGTTAGGGGCC +
Preference number: 4 (lower is better)
Translates to: FPPVWKPQTEAHGDPSAPGGRPW*RKRLGA
Trigger: GGCCCCTAACCTCTTTCTGCACCAAGGGCGGCCCCC...TGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp TCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGCGCCTTGTCCCTGTCTaGGTGCATCCTCCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSSLEATDRSPWRSKRPKRLVPV*VHPPQP
Trigger: TGGCTGCGGAGGATGCACGCAGACAGGGACAAGGCG...CTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp ATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGAGAGGAGAGGTCGGCCCAGCGCTaGGCGCAGCGCCTGGCAATG +
Preference number: 4 (lower is better)
Translates to: IALFSCWVHGHRASRGEERSAQR*AQRLAM
Trigger: CATTGCCAGGCGCTGCGCCCAGCGCTGGGCCGACCT...CTCCTCTCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp CCCTCCCGCCCCCGGTGGTTGTGGGTTCAAGGCGTGGCTGGATCACATGGGCCAACTGGACATGCGGGTTaGCACGGTACAGATCTAAGA +
Preference number: 4 (lower is better)
Translates to: PSRPRWLWVQGVAGSHGPTGHAG*HGTDLR
Trigger: TCTTAGATCTGTACCGTGCCAACCCGCATGTCCAGT...TGGCCCATGTGATCCAGCCACGCCTTGAACCCACAACCACCGGGGGCGGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR TCA 90 bp AAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATACAGGACAGCAGGGCTTaGAGGACCAGCGGGACCTGT +
Preference number: 4 (lower is better)
Translates to: KPQTEAHGDPSAPSGGVIQDSRA*RTSGTC
Trigger: ACAGGTCCCGCTGGTCCTTCAAGCCCTGCTGTCCTG...TATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp GGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGTCCGCAGCCAAGTCTTaGGGCCTGCGTCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GGVIQQAWCRKQLSGGLESAAKS*GLRRRA
Trigger: AGCTCTGCGACGCAGGCCTCAAGACTTGGCTGCGGA...CTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR TCA 90 bp TCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGCTTTGGTGCTGGGGGTaGGAGGCACCTTCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: SSSLEATDRSPWRSKRPKLWCWG*EAPSRG
Trigger: ACCCCTTGAAGGTGCCTCTCACCCCCAGCACCAAAG...CTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR TCA 90 bp GGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGGAGGGTGGAGGGGAGTaGGGGCATTGTGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: GGVIQQAWCRKQLSGGLEEGGGE*GHCVHG
Trigger: ACCGTGCACACAATGCCCTCACTCCCCTCCACCCTC...CTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp CCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGACTCCCCGGGATGGCCTaGTCCTCTGCAGGAGCACCG +
Preference number: 4 (lower is better)
Translates to: PGIALFSCWVHGHRASRGLPGMA*SSAGAP
Trigger: CGGTGCTCCTGCAGAGGAGCAGGCCATCCCGGGGAG...TCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp AGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCCAGCGGGACCTGTGTaGTGGGGAGGACTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: SLEATDRSPWRSKRPKWWPAGPV*WGGLCG
Trigger: ACCACAAAGTCCTCCCCAGCACACAGGTCCCGCTGG...CCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp TTTCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAGACAGGAGCTCCTGGTaGTCACCATCCAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FPPVWKPQTEAHGDPSAPDRSSW*SPSKPR
Trigger: CCTGGGCTTGGATGGTGATCACCAGGAGCTCCTGTC...TGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp GGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGGGGATCCGGGCACCCTaGGAATGCCTTCCATGTCCA +
Preference number: 4 (lower is better)
Translates to: GGVIQQAWCRKQLSGGLEGIRAP*ECLPCP
Trigger: TGGACATGGAAGGCATTCTCAGGGTGCCCGGATCCC...CTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp GGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGCTTTGGTGCTGGGGGTaGGAGGCACCTTCAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GGVIQQAWCRKQLSGGLELWCWG*EAPSRG
Trigger: ACCCCTTGAAGGTGCCTCTCACCCCCAGCACCAAAG...CTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp GCCCCAAGTGGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGATCGGCAGGGAACACTTaGCCCAGGCAGAGGTGCCTC +
Preference number: 4 (lower is better)
Translates to: APSGGVIQQAWCRKQLSGSAGNT*PRQRCL
Trigger: GAGGCACCTCTGCCTGGGGCAAGTGTTCCCTGCCGA...TCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp TCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGAGGACCCACTCACCATaGGGGTTGGCACGGTACAGA +
Preference number: 4 (lower is better)
Translates to: SSSLEATDRSPWRSKRPKRTHSP*GLARYR
Trigger: TCTGTACCGTGCCAACCCGCATGGTGAGTGGGTCCT...CTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp TTTCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCACCCAGGCTCTGCTGCTaGAGGAAACTTAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: FPPVWKPQTEAHGDPSAPPRLCC*RKLRGP
Trigger: GGGGCCTCTAAGTTTCCTCCAGCAGCAGAGCCTGGG...TGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp AGTGGAGAGAGCACCACCCCTGAGTCTATTTCTGAGGGGTCTGAGAGGCATTTCCCCTTGACCCTGGCCTaGGATCCGGGCACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: SGESTTPESISEGSERHFPLTLA*DPGTLR
Trigger: TCTCAGGGTGCCCGGATCCCAGGCCAGGGTCAAGGG...GAAATGCCTCTCAGACCCCTCAGAAATAGACTCAGGGGTGGTGCTCTCTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp AAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATAAACTGCCTCAGGACGTaGGCCACTTTGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KPQTEAHGDPSAPSGGVINCLRT*ATLVLG
Trigger: CCCCAGCACCAAAGTGGCCCACGTCCTGAGGCAGTT...TATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp TCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGAGCTCTCCACTCCAGTaGAACAGCCAGCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSSLEATDRSPWRSKRPKSSPLQ*NSQQSQ
Trigger: CTGGCTCTGCTGGCTGTTCCACTGGAGTGGAGAGCT...CTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp CCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGATCCGCAGCCAAGTCTTaGGGCCTGCGTCGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PGIALFSCWVHGHRASRGSAAKS*GLRRRA
Trigger: AGCTCTGCGACGCAGGCCTCAAGACTTGGCTGCGGA...TCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR TCA 90 bp AGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGTTCTTCTGGGGAAGCTaGTCCATTCGGCCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SLEATDRSPWRSKRPKWWFFWGS*SIRPEE
Trigger: CTCCTCAGGCCGAATGGATCAGCTTCCCCAGAAGAA...CCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp CAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATACAGCAACATCCAGGCTGCTCCTaGGACTCGCAGGGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: QTEAHGDPSAPSGGVIQQHPGCS*DSQGLG
Trigger: ACCTAAACCCTGCGAGTCTCAGGAGCAGCCTGGATG...TTGCTGTATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp GGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGGACAGGCCTGTGTCCTaGAGCCACTGGGATTCAGCT +
Preference number: 4 (lower is better)
Translates to: GGVIQQAWCRKQLSGGLEDRPVS*SHWDSA
Trigger: AGCTGAATCCCAGTGGCTGCAGGACACAGGCCTGTC...CTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp TTTCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCATCCACTTCCCCGCCTTaGTCCTCTTCAGGTCCAAGC +
Preference number: 4 (lower is better)
Translates to: FPPVWKPQTEAHGDPSAPSTSPP*SSSGPS
Trigger: GCTTGGACCTGAAGAGGAGCAAGGCGGGGAAGTGGA...TGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp ATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGAGAGGAGCTGCACCACCTCGGCTaGCCCTTCTGCCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: IALFSCWVHGHRASRGEELHHLG*PFCQLL
Trigger: AAGCAGCTGGCAGAAGGGGCAGCCGAGGTGGTGCAG...CTCCTCTCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp CAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAGCTGGGGGCGCCTGCTaGTACTGTCGTTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: QTEAHGDPSAPSGGVIQQAGGAC*YCRSVF
Trigger: GAAAACTGAACGACAGTAGCAGCAGGCGCCCCCAGC...TTGCTGTATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp GGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGAGAGCTGGGGGCGCCTaGTGCTACTGTCGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: GGVIQQAWCRKQLSGGLERAGGA*CYCRSV
Trigger: AACTGAACGACAGTAGCAGCAGGCGCCCCCAGCTCT...CTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp CAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAAGAGCTGGGGGCGCCTaGTGCTACTGTCGTTCAGTT +
Preference number: 4 (lower is better)
Translates to: QTEAHGDPSAPSGGVIQQRAGGA*CYCRSV
Trigger: AACTGAACGACAGTAGCAGCAGGCGCCCCCAGCTCT...TTGCTGTATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp TTTCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCATTGTCCCTGTCTGCGTaGATCCTCCGCAGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: FPPVWKPQTEAHGDPSAPLSLSA*ILRSQV
Trigger: GACTTGGCTGCGGAGGATGCACGCAGACAGGGACAA...TGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp GGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGGACCACCTGGATCTTTaGCACCTTGGGAGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GGVIQQAWCRKQLSGGLEDHLDL*HLGSRL
Trigger: GAGGCGACTCCCAAGGTGGCAAAGATCCAGGTGGTC...CTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp AAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATAGAACCAGGGCTGAGGTaGTCTGTGAACTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KPQTEAHGDPSAPSGGVIEPGLR*SVNCLR
Trigger: CCTGAGGCAGTTCACAGAGCACCTCAGCCCTGGTTC...TATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp CAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAAGGACCCACTCACCATaGGGGTTGGCACGGTACAGA +
Preference number: 4 (lower is better)
Translates to: QTEAHGDPSAPSGGVIQQRTHSP*GLARYR
Trigger: TCTGTACCGTGCCAACCCGCATGGTGAGTGGGTCCT...TTGCTGTATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp AAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATACTCATGCTGGGTACATaGACACAGAGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KPQTEAHGDPSAPSGGVILMLGT*TQSQQG
Trigger: CCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAG...TATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp AGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGAAGCGCCCCAAGTGGTaGCGTCATACAGCAAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLEATDRSPWRSKRPKWWKRPKW*RHTASL
Trigger: CAAGCTTGCTGTATGACGCCACCACTTGGGGCGCTT...CCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp TTTCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCATCCAAGCGCCCCAAGTaGTGGCGTCATACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: FPPVWKPQTEAHGDPSAPSKRPK*WRHTAS
Trigger: GCTTGCTGTATGACGCCACCACTTGGGGCGCTTGGA...TGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp AAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATATCCAAGCGCCCCAAGTaGTGGCGTCATACAGCAAGC +
Preference number: 4 (lower is better)
Translates to: KPQTEAHGDPSAPSGGVISKRPK*WRHTAS
Trigger: GCTTGCTGTATGACGCCACCACTTGGGGCGCTTGGA...TATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR TCA 90 bp CAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAAGGCAGAGTCCATGTTaGAGGCTTCTTCCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: QTEAHGDPSAPSGGVIQQRQSPC*RLLPSQ
Trigger: CTGGGAGGGAAGAAGCCTTCAACATGGACTCTGCCT...TTGCTGTATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp CCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGAGGAGGTACTCAGCCGTaGGCAAAGGTGTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PGIALFSCWVHGHRASRGGGTQP*AKVSAA
Trigger: AGCTGCCGACACCTTTGCTCACGGCTGAGTACCTCC...TCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp ATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGAGAGGAGGGGCCACCACCTTCCTaGGGAATTCCAGCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: IALFSCWVHGHRASRGEEGPPPS*GIPAVP
Trigger: AGGCACTGCTGGAATTCCTCAGGAAGGTGGTGGCCC...CTCCTCTCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp GGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGGAGGAGGATGTTGGCTaGCTCCATGGACCTATGGTG +
Preference number: 4 (lower is better)
Translates to: GGVIQQAWCRKQLSGGLEEEDVG*LHGPMV
Trigger: CACCATAGGTCCATGGAGTCAGCCAACATCCTCCTC...CTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp AGTGAACAAATAAGCGAAGCCTCACCTGGCCTGAGGATACAGACCCAGGGCAGACAGAGAGGCTGTCCCTaGAATGCCCCCACCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SEQISEASPGLRIQTQGRQRGCP*NAPTLQ
Trigger: CTGAAGGGTGGGGGCATTGCAGGGACAGCCTCTCTG...TCTGCCCTGGGTCTGTATCCTCAGGCCAGGTGAGGCTTCGCTTATTTGTTCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR CCA 90 bp GCTCTCCTGGTTTTGTCTCTGGTGCTGCTGCTACTACACATTGTAGGGCCACTTCACACAGCGGCCACCTaGGTCTGTGTCAGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: ALLVLSLVLLLLHIVGPLHTAAT*VCVRVD
Trigger: GTCCACCCTGACACAGACCCAGGTGGCCGCTGTGTG...AAGTGGCCCTACAATGTGTAGTAGCAGCAGCACCAGAGACAAAACCAGGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp GGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGCTGGGGAGGACTTTGTaGTCAGCTTCTAGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: GGVIQQAWCRKQLSGGLELGRTL*SASSRL
Trigger: CAGCCTGCTAGAAGCTGACCACAAAGTCCTCCCCAG...CTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp ACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGGGATCTTTGCCACCTTaGGAGTCGCCTCGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: TLPWNSFVLMLGTWTQSQGSLPP*ESPRGR
Trigger: ACGGCCTCGAGGCGACTCCCAAGGTGGCAAAGATCC...CTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp ACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGAACTGCCTCAGGACGTaGGCCACTTTGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TLPWNSFVLMLGTWTQSQNCLRT*ATLVLG
Trigger: CCCCAGCACCAAAGTGGCCCACGTCCTGAGGCAGTT...CTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp TGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACAGCCAGCCTCTCCATCTaGGCGGCGGGGAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: WNKTQTLPWNSFVLMLGTASLSI*AAGRRA
Trigger: TGCCCTCCTCCCCGCCGCCCAGATGGAGAGGCTGGC...TGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp GCCCCAAGTGGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGACTCATGCTGGGTACATaGACACAGAGCCAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: APSGGVIQQAWCRKQLSGLMLGT*TQSQQG
Trigger: CCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAG...TCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp CAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAACAGACAGAAGCCCATaGAGATCCAAGCGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: QTEAHGDPSAPSGGVIQQTDRSP*RSKRPK
Trigger: CTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGT...TTGCTGTATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR TCA 90 bp AAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATACACCGCAGCTTGTTCTaGGTAGGCAGAGTCCATGTT +
Preference number: 4 (lower is better)
Translates to: KPQTEAHGDPSAPSGGVIHRSLF*VGRVHV
Trigger: AACATGGACTCTGCCTACTCAGAACAAGCTGCGGTG...TATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp ACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCATCCAGGCTGCTCCTaGGACTCGCAGGGTTTAGGT +
Preference number: 4 (lower is better)
Translates to: TLPWNSFVLMLGTWTQSQHPGCS*DSQGLG
Trigger: ACCTAAACCCTGCGAGTCTCAGGAGCAGCCTGGATG...CTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR TCA 90 bp CCTCCCGCCCCCGGTGGTTGTGGGTTCAAGGCGTGGCTGGATCACATGGGCCAGAAACTCATTGTTAAGTaGACAAATAAGCGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: PPAPGGCGFKAWLDHMGQKLIVK*TNKRSL
Trigger: GAGGCTTCGCTTATTTGTTCACTTAACAATGAGTTT...CTGGCCCATGTGATCCAGCCACGCCTTGAACCCACAACCACCGGGGGCGGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR GCA 90 bp CTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGATGGCCTGCTCCTCTaGAGGAGCACCGCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: LRPSPGIALFSCWVHGHRDGLLL*RSTAAC
Trigger: ACAAGCTGCGGTGCTCCTGCAGAGGAGCAGGCCATC...TCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp TTTCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGAACCTGCAGGCGCTaGTTCAGGTTGGGGATGTTA +
Preference number: 4 (lower is better)
Translates to: FPPVWKPQTEAHGDPSAPRTCRR*FRLGML
Trigger: TAACATCCCCAACCTGAAGCAGCGCCTGCAGGTTCT...TGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp ACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGGCTGGGGGCGCCTGCTaGTACTGTCGTTCAGTTTTC +
Preference number: 4 (lower is better)
Translates to: TLPWNSFVLMLGTWTQSQAGGAC*YCRSVF
Trigger: GAAAACTGAACGACAGTAGCAGCAGGCGCCCCCAGC...CTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp CCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGAAGGTGCTCTGTGAACTaGCTCAGGACGTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: PGIALFSCWVHGHRASRGRCSVN*LRTWAT
Trigger: AGTGGCCCACGTCCTGAGGCAGTTCACAGAGCACCT...TCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp TTTCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCATCCAAAAGCCATCCATaGTGGAGCTCTCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: FPPVWKPQTEAHGDPSAPSKSHP*WSSPLQ
Trigger: CTGGAGTGGAGAGCTCCAGCATGGATGGCTTTTGGA...TGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp ATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGAGAGGAGGGGTCTGTGTCAGGGTaGACAGGAGCTCCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: IALFSCWVHGHRASRGEEGSVSG*TGAPGD
Trigger: ATCACCAGGAGCTCCTGTCCACCCTGACACAGACCC...CTCCTCTCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp CTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCGGGACCTGTGTGCTaGGGAGGACTTTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LRPSPGIALFSCWVHGHRAGPVC*GGLCGQ
Trigger: CTGACCACAAAGTCCTCCCCAGCACACAGGTCCCGC...TCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp GGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGAGGGCTGGAGATAGGCCAGACCACCTaGATCTTTGCCACCTTGGGA +
Preference number: 4 (lower is better)
Translates to: GGVIQQAWCRKQLSGGLEIGQTT*IFATLG
Trigger: TCCCAAGGTGGCAAAGATCCAGGTGGTCTGGCCTAT...CTCCAGCCCTCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp GTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCCATAGAGGAGGATGTTaGCTGACTCCATGGACCTAT +
Preference number: 4 (lower is better)
Translates to: VWKPQTEAHGDPSAPSGGHRGGC*LTPWTY
Trigger: ATAGGTCCATGGAGTCAGCCAACATCCTCCTCTATG...GCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp AGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGACTCACCATGCGGGTTaGCACGGTACAGATCTAAGA +
Preference number: 4 (lower is better)
Translates to: SLEATDRSPWRSKRPKWWTHHAG*HGTDLR
Trigger: TCTTAGATCTGTACCGTGCCAACCCGCATGGTGAGT...CCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp GTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCAATTTTCCTCCAGTCTaGAAGCCACAGACAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VWKPQTEAHGDPSAPSGGNFPPV*KPQTEA
Trigger: GGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAAATT...GCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp CCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCCATTTCTCCCGGGGCTaGTCATGGCTACAATCTTGG +
Preference number: 4 (lower is better)
Translates to: PSAPSGGVIQQAWCRKQLHFSRG*SWLQSW
Trigger: CCAAGATTGTAGCCATGACCAGCCCCGGGAGAAATG...GAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGCGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp AGTGGAGAGAGCACCACCCCTGAGTCTATTTCTGAGGGGTCTGAGAGGCATTTCGAGGAGGATGTTGGCTaGCTCCATGGACCTATGGTG +
Preference number: 4 (lower is better)
Translates to: SGESTTPESISEGSERHFEEDVG*LHGPMV
Trigger: CACCATAGGTCCATGGAGTCAGCCAACATCCTCCTC...GAAATGCCTCTCAGACCCCTCAGAAATAGACTCAGGGGTGGTGCTCTCTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR TCA 90 bp AGTGGAGAGAGCACCACCCCTGAGTCTATTTCTGAGGGGTCTGAGAGGCATTTCCCTAGCCCCTCATCCTaGAAGGATTCTGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SGESTTPESISEGSERHFPSPSS*KDSERA
Trigger: TGCCCTCTCAGAATCCTTTCAGGATGAGGGGCTAGG...GAAATGCCTCTCAGACCCCTCAGAAATAGACTCAGGGGTGGTGCTCTCTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp AGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGACCTTCCTCATATCCTaGAGGGACAAGTCTCCTATC +
Preference number: 4 (lower is better)
Translates to: SLEATDRSPWRSKRPKWWTFLIS*RDKSPI
Trigger: GATAGGAGACTTGTCCCTGCAGGATATGAGGAAGGT...CCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp AGGAAGCCTTGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCCAAGTCTTGAGGCCTaGGTCGCAGAGCTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: RKPWNKTQTLPWNSFVLMPSLEA*VAELGA
Trigger: CGCCCCCAGCTCTGCGACGCAGGCCTCAAGACTTGG...CATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCAAGGCTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp CTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAAGGTGCTCTGTGAACTaGCTCAGGACGTGGGCCACT +
Preference number: 4 (lower is better)
Translates to: LRPSPGIALFSCWVHGHRRCSVN*LRTWAT
Trigger: AGTGGCCCACGTCCTGAGGCAGTTCACAGAGCACCT...TCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp CAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAACTCACCATGCGGGTTaGCACGGTACAGATCTAAGA +
Preference number: 4 (lower is better)
Translates to: QTEAHGDPSAPSGGVIQQTHHAG*HGTDLR
Trigger: TCTTAGATCTGTACCGTGCCAACCCGCATGGTGAGT...TTGCTGTATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp GTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAGCTTaGTGTAGGAAGCAACTCTCT +
Preference number: 4 (lower is better)
Translates to: VWKPQTEAHGDPSAPSGGVIQQA*CRKQLS
Trigger: AGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGAC...GCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp CCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGAACAGACAGAAGCCCATaGAGATCCAAGCGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PGIALFSCWVHGHRASRGTDRSP*RSKRPK
Trigger: CTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGT...TCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR TCA 90 bp AGGAAGCCTTGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGGAGGGTGGAGGGGAGTaGGGGCATTGTGTGCACGGT +
Preference number: 4 (lower is better)
Translates to: RKPWNKTQTLPWNSFVLMEGGGE*GHCVHG
Trigger: ACCGTGCACACAATGCCCTCACTCCCCTCCACCCTC...CATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCAAGGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp CCCTGCAATGCCCCCACCCTTCAGCAATGGGTATCATTACTCCATGCCTCCCCATGTTGGCTGACTCCATaGACCTATGGTGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: PCNAPTLQQWVSLLHASPCWLTP*TYGVEG
Trigger: TCCTTCTACACCATAGGTCCATGGAGTCAGCCAACA...TGGGGAGGCATGGAGTAATGATACCCATTGCTGAAGGGTGGGGGCATTGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR CCA 90 bp CTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAAGCTTCCCCTTCCTCTaGAAGCTGGCCTTCATTCCC +
Preference number: 4 (lower is better)
Translates to: LRPSPGIALFSCWVHGHRSFPFL*KLAFIP
Trigger: GGGAATGAAGGCCAGCTTCCAGAGGAAGGGGAAGCT...TCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp GCTCTCCTGGTTTTGTCTCTGGTGCTGCTGCTACTACACATTGTAGGGCCACTTTCCCGGGGCTGGTCATaGCTACAATCTTGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ALLVLSLVLLLLHIVGPLSRGWS*LQSWLP
Trigger: AGGAAGCCAAGATTGTAGCCATGACCAGCCCCGGGA...AAGTGGCCCTACAATGTGTAGTAGCAGCAGCACCAGAGACAAAACCAGGAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp AGCAATGGGTATCATTACTCCATGCCTCCCCATTCTGAGTTCTCTTCCTGCCCTTGTGGGTTCAAGGCGTaGCTGGATCACATGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SNGYHYSMPPHSEFSSCPCGFKA*LDHMGQ
Trigger: CTGGCCCATGTGATCCAGCCACGCCTTGAACCCACA...AGGGCAGGAAGAGAACTCAGAATGGGGAGGCATGGAGTAATGATACCCATTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR CCA 90 bp CAAATAAGCGAAGCCTCACCTGGCCTGAGGATACAGACCCAGGGCAGAGGAGAACCCACCCTTCAGCAATaGGTATCATTACTCCATGCC +
Preference number: 4 (lower is better)
Translates to: QISEASPGLRIQTQGRGEPTLQQ*VSLLHA
Trigger: GGCATGGAGTAATGATACCCATTGCTGAAGGGTGGG...TTCTCCTCTGCCCTGGGTCTGTATCCTCAGGCCAGGTGAGGCTTCGCTTATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR TCA 90 bp TGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACAGCGCGGTCAGCTCTATaGGGGCCAGAGAAGGTACCT +
Preference number: 4 (lower is better)
Translates to: WNKTQTLPWNSFVLMLGTARSAL*GPEKVP
Trigger: AGGTACCTTCTCTGGCCCTCATAGAGCTGACCGCGC...TGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp CCCTTCAGCAATGGGTATCATTACTCCATGCCTCCCCATTCTGAGTTCTCTTCCGAGGAGGATGTTGGCTaGCTCCATGGACCTATGGTG +
Preference number: 4 (lower is better)
Translates to: PFSNGYHYSMPPHSEFSSEEDVG*LHGPMV
Trigger: CACCATAGGTCCATGGAGTCAGCCAACATCCTCCTC...GGAAGAGAACTCAGAATGGGGAGGCATGGAGTAATGATACCCATTGCTGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR TCA 90 bp GCCCCAAGTGGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGACCAGGCGATGCTCATTaGTATTCCCTCCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: APSGGVIQQAWCRKQLSGPGDAH*YSLQLH
Trigger: ATGAAGTTGGAGGGAATATCAATGAGCATCGCCTGG...TCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR TCA 90 bp CAAATAAGCGAAGCCTCACCTGGCCTGAGGATACAGACCCAGGGCAGAGGAGAACCAGGCGATGCTCATTaGTATTCCCTCCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: QISEASPGLRIQTQGRGEPGDAH*YSLQLH
Trigger: ATGAAGTTGGAGGGAATATCAATGAGCATCGCCTGG...TTCTCCTCTGCCCTGGGTCTGTATCCTCAGGCCAGGTGAGGCTTCGCTTATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR GCA 90 bp TGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACAGCCCCTTCTGCCAGCTaGTTCTCCTTGCCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: WNKTQTLPWNSFVLMLGTAPSAS*FSLPLG
Trigger: CCCCAAAGGCAAGGAGAAGCAGCTGGCAGAAGGGGC...TGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp CTTGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTAGGATCTTTGCCACCTTaGGAGTCGCCTCGAGGCCGT +
Preference number: 4 (lower is better)
Translates to: LGIKLRPSPGIALFSCWVGSLPP*ESPRGR
Trigger: ACGGCCTCGAGGCGACTCCCAAGGTGGCAAAGATCC...TACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR TCA 90 bp ATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGAGAGGAGCCAGGCGATGCTCATTaGTATTCCCTCCAACTTCAT +
Preference number: 4 (lower is better)
Translates to: IALFSCWVHGHRASRGEEPGDAH*YSLQLH
Trigger: ATGAAGTTGGAGGGAATATCAATGAGCATCGCCTGG...CTCCTCTCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp ATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGATTGTCCCTGTCTGCGTaGATCCTCCGCAGCCAAGTC +
Preference number: 4 (lower is better)
Translates to: IKLRPSPGIALFSCWVHGLSLSA*ILRSQV
Trigger: GACTTGGCTGCGGAGGATGCACGCAGACAGGGACAA...TCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp ATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGAGACCACCTGGATCTTTaGCACCTTGGGAGTCGCCTC +
Preference number: 4 (lower is better)
Translates to: IKLRPSPGIALFSCWVHGDHLDL*HLGSRL
Trigger: GAGGCGACTCCCAAGGTGGCAAAGATCCAGGTGGTC...TCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp TGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACAGAACCAGGGCTGAGGTaGTCTGTGAACTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: WNKTQTLPWNSFVLMLGTEPGLR*SVNCLR
Trigger: CCTGAGGCAGTTCACAGAGCACCTCAGCCCTGGTTC...TGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp AAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATAATAGCTTTGTTCTCATaGTGGGTACATGGACACAGA +
Preference number: 4 (lower is better)
Translates to: KPQTEAHGDPSAPSGGVIIALFS*WVHGHR
Trigger: TCTGTGTCCATGTACCCAGCATGAGAACAAAGCTAT...TATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp CAAATAAGCGAAGCCTCACCTGGCCTGAGGATACAGACCCAGGGCAGAGGAGAAGGTATCATTACTCCATaGCTCCCCATTCTGAGTTCT +
Preference number: 4 (lower is better)
Translates to: QISEASPGLRIQTQGRGEGIITP*LPILSS
Trigger: AGAACTCAGAATGGGGAGGCATGGAGTAATGATACC...TTCTCCTCTGCCCTGGGTCTGTATCCTCAGGCCAGGTGAGGCTTCGCTTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR CCA 90 bp AGTGGAGAGAGCACCACCCCTGAGTCTATTTCTGAGGGGTCTGAGAGGCATTTCCATAGAGGAGGATGTTaGCTGACTCCATGGACCTAT +
Preference number: 4 (lower is better)
Translates to: SGESTTPESISEGSERHFHRGGC*LTPWTY
Trigger: ATAGGTCCATGGAGTCAGCCAACATCCTCCTCTATG...GAAATGCCTCTCAGACCCCTCAGAAATAGACTCAGGGGTGGTGCTCTCTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp CTTGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTAGTGTCCTGCAGCCACTaGGATTCAGCTTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: LGIKLRPSPGIALFSCWVVSCSH*DSASPS
Trigger: GGAAGGGGAAGCTGAATCCCAGTGGCTGCAGGACAC...TACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp CTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCTTTGTTCTCATGCTaGGTACATGGACACAGAGCC +
Preference number: 4 (lower is better)
Translates to: LRPSPGIALFSCWVHGHRALFSC*VHGHRA
Trigger: GGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGC...TCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp AGGAAGCCTTGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGAGAGTCATCTTGTTGTaGTGTTCCCGGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: RKPWNKTQTLPWNSFVLMRVILL*CSRATT
Trigger: GGTGGTGGCCCGGGAACAGCACAACAAGATGACTCT...CATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCAAGGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR GCA 90 bp ACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGTGGTTTTGTCTCTGGTaGTGCTGCTACTACACATTG +
Preference number: 4 (lower is better)
Translates to: TLPWNSFVLMLGTWTQSQWFCLW*CCYYTL
Trigger: CAATGTGTAGTAGCAGCAGCACCAGAGACAAAACCA...CTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp ATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGATTCAGTTTTCGCACCTaGGCGACCAGGAAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: IKLRPSPGIALFSCWVHGFSFRT*ATRKEA
Trigger: CGCCTCTTTCCTGGTCGCCCAGGTGCGAAAACTGAA...TCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp AGGAAGCCTTGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGTTCAGTTTTCGCACCTaGGCGACCAGGAAAGAGGCG +
Preference number: 4 (lower is better)
Translates to: RKPWNKTQTLPWNSFVLMFSFRT*ATRKEA
Trigger: CGCCTCTTTCCTGGTCGCCCAGGTGCGAAAACTGAA...CATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCAAGGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp CTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGATGTTGGCTGACTCCATaGACCTATGGTGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LRPSPGIALFSCWVHGHRCWLTP*TYGVEG
Trigger: TCCTTCTACACCATAGGTCCATGGAGTCAGCCAACA...TCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp GCTCTCCTGGTTTTGTCTCTGGTGCTGCTGCTACTACACATTGTAGGGCCACTTTCCTGGTTTTGTCTCTaGTGCTGCTGCTACTACACA +
Preference number: 4 (lower is better)
Translates to: ALLVLSLVLLLLHIVGPLSWFCL*CCCYYT
Trigger: TGTGTAGTAGCAGCAGCACCAGAGACAAAACCAGGA...AAGTGGCCCTACAATGTGTAGTAGCAGCAGCACCAGAGACAAAACCAGGAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp GCCCCAAGTGGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGACAGAAAAGGAAGCCTTaGAATAAAACTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: APSGGVIQQAWCRKQLSGQKRKP*NKTQTL
Trigger: GAGGGTCTGAGTTTTATTCCAAGGCTTCCTTTTCTG...TCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp CTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAAATTTTCCTCCAGTCTaGAAGCCACAGACAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LRPSPGIALFSCWVHGHRNFPPV*KPQTEA
Trigger: GGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAAATT...TCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
3UTR CAA 72 bp CTTGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTaGTTCTCATGCTGGGTACATGGACACAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGIKLRPSPGIA*FSCWVHGHRAS
Trigger: GCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR TCA 90 bp ATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGAGTGTTGTCTTCGCACTaGGCGAGCATAGATGTCCAG +
Preference number: 4 (lower is better)
Translates to: IKLRPSPGIALFSCWVHGVLSSH*ASIDVQ
Trigger: CTGGACATCTATGCTCGCTCAGTGCGAAGACAACAC...TCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp GCTCTCCTGGTTTTGTCTCTGGTGCTGCTGCTACTACACATTGTAGGGCCACTTACATTTTCCCTGAATTaGAGACCCCAAAGACATCCC +
Preference number: 4 (lower is better)
Translates to: ALLVLSLVLLLLHIVGPLTFSLN*RPQRHP
Trigger: GGGATGTCTTTGGGGTCTTCAATTCAGGGAAAATGT...AAGTGGCCCTACAATGTGTAGTAGCAGCAGCACCAGAGACAAAACCAGGAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR TCA 90 bp TGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACAATCCTGAAAGGATTCTaGGAGGGCAAGGGGCTTGTC +
Preference number: 4 (lower is better)
Translates to: WNKTQTLPWNSFVLMLGTILKGF*EGKGLV
Trigger: GACAAGCCCCTTGCCCTCTCAGAATCCTTTCAGGAT...TGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp CTTGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTAATAGGCCAGACCACCTaGATCTTTGCCACCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LGIKLRPSPGIALFSCWVIGQTT*IFATLG
Trigger: TCCCAAGGTGGCAAAGATCCAGGTGGTCTGGCCTAT...TACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp CCCTTCAGCAATGGGTATCATTACTCCATGCCTCCCCATTCTGAGTTCTCTTCCCATAGAGGAGGATGTTaGCTGACTCCATGGACCTAT +
Preference number: 4 (lower is better)
Translates to: PFSNGYHYSMPPHSEFSSHRGGC*LTPWTY
Trigger: ATAGGTCCATGGAGTCAGCCAACATCCTCCTCTATG...GGAAGAGAACTCAGAATGGGGAGGCATGGAGTAATGATACCCATTGCTGAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR CCA 90 bp TGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACAGTCACAGAGCTCTCCTaGTTTTGTCTCTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: WNKTQTLPWNSFVLMLGTVTELS*FCLWCC
Trigger: GCAGCACCAGAGACAAAACCAGGAGAGCTCTGTGAC...TGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CCA 90 bp ACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGAAAAGGAAGCCTTaGAATAAAACTCAGACCCTC +
Preference number: 4 (lower is better)
Translates to: TLPWNSFVLMLGTWTQSQQKRKP*NKTQTL
Trigger: GAGGGTCTGAGTTTTATTCCAAGGCTTCCTTTTCTG...CTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp CTTGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTAGCTTTGTTCTCATGCTaGGTACATGGACACAGAGCC +
Preference number: 4 (lower is better)
Translates to: LGIKLRPSPGIALFSCWVALFSC*VHGHRA
Trigger: GGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGC...TACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp GTAAACTCATTGTTAAGTGAACAAATAAGCGAAGCCTCACCTGGCCTGAGGATAAAGCGAAGCCTCACCTaGCCTGAGGATACAGACCCA +
Preference number: 4 (lower is better)
Translates to: VNSLLSEQISEASPGLRIKRSLT*PEDTDP
Trigger: TGGGTCTGTATCCTCAGGCCAGGTGAGGCTTCGCTT...TATCCTCAGGCCAGGTGAGGCTTCGCTTATTTGTTCACTTAACAATGAGTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR CCA 90 bp ATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGATGTTGGCTGACTCCATaGACCTATGGTGTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: IKLRPSPGIALFSCWVHGCWLTP*TYGVEG
Trigger: TCCTTCTACACCATAGGTCCATGGAGTCAGCCAACA...TCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CCA 90 bp AGGAAGCCTTGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGGTCATACAGCAAGCTTaGTGTAGGAAGCAACTCTCT +
Preference number: 4 (lower is better)
Translates to: RKPWNKTQTLPWNSFVLMVIQQA*CRKQLS
Trigger: AGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGAC...CATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCAAGGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR GCA 90 bp CTTGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTAATAGCTTTGTTCTCATaGTGGGTACATGGACACAGA +
Preference number: 4 (lower is better)
Translates to: LGIKLRPSPGIALFSCWVIALFS*WVHGHR
Trigger: TCTGTGTCCATGTACCCAGCATGAGAACAAAGCTAT...TACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS GCA 90 bp AGCTGCAGCCCAGGTCGGCCCAGCGCTGGGCGCAGCGCCTGGCAATaGGGGCCCGCGGGATCCGAGGACACGGTGAGGCTAGGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: SCSPGRPSAGRSAWQ*GPAGSEDTVRLGAL
Trigger: CAGGGCCCCTAGCCTCACCGTGTCCTCGGATCCCGCGGGCCCGCATTGCCAGGCGCTGCGCCCAGCGCTGGGCCGACCTGGGCTGCAGCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS CCA 90 bp GGCCAGAGCTGCAGCCCAGGTCGGCCCAGCGCTGGGCGCAGCGCCTaGCAATGCGGGCCCGCGGGATCCGAGGACACGGTGAGGCTAGGG +
Preference number: 5 (lower is better)
Translates to: GQSCSPGRPSAGRSA*QCGPAGSEDTVRLG
Trigger: CCCTAGCCTCACCGTGTCCTCGGATCCCGCGGGCCCGCATTGCCAGGCGCTGCGCCCAGCGCTGGGCCGACCTGGGCTGCAGCTCTGGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp CCCTCCCGCCCCCGGTGGTTGTGGGTTCAAGGCGTGGCTGGATCACATGGGCCATCCCGCCCCCGGTGGTaGTGGGTTCAAGGCGTGGCT +
Preference number: 5 (lower is better)
Translates to: PSRPRWLWVQGVAGSHGPSRPRW*WVQGVA
Trigger: AGCCACGCCTTGAACCCACAACCACCGGGGGCGGGA...TGGCCCATGTGATCCAGCCACGCCTTGAACCCACAACCACCGGGGGCGGGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS TCA 90 bp CCCCCGCCTTGTCCCTGTCTGCGTGCATCCTCCGCAGCCAAGTCTTaGGGCCTGCGTCGCAGAGCTGGGGGCGCCTGCTGCTACTGTCGT +
Preference number: 5 (lower is better)
Translates to: PPPCPCLRASSAAKS*GLRRRAGGACCYCR
Trigger: ACGACAGTAGCAGCAGGCGCCCCCAGCTCTGCGACGCAGGCCTCAAGACTTGGCTGCGGAGGATGCACGCAGACAGGGACAAGGCGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS GCA 90 bp TTGGGAGTCGCCTCGAGGCCGTCCCCCGCCTTGTCCCTGTCTGCGTaGATCCTCCGCAGCCAAGTCTTGAGGCCTGCGTCGCAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LGVASRPSPALSLSA*ILRSQVLRPASQSW
Trigger: CCAGCTCTGCGACGCAGGCCTCAAGACTTGGCTGCGGAGGATGCACGCAGACAGGGACAAGGCGGGGGACGGCCTCGAGGCGACTCCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS GCA 90 bp CACCTTGGGAGTCGCCTCGAGGCCGTCCCCCGCCTTGTCCCTGTCTaGGTGCATCCTCCGCAGCCAAGTCTTGAGGCCTGCGTCGCAGAG +
Preference number: 5 (lower is better)
Translates to: HLGSRLEAVPRLVPV*VHPPQPSLEACVAE
Trigger: CTCTGCGACGCAGGCCTCAAGACTTGGCTGCGGAGGATGCACGCAGACAGGGACAAGGCGGGGGACGGCCTCGAGGCGACTCCCAAGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS CCA 90 bp TGTCCAGCCGGCGGCACACAGCGGCCACCTGGGTCTGTGTCAGGGTaGACAGGAGCTCCTGGTGATCACCATCCAAGCCCAGGCCACCAA +
Preference number: 5 (lower is better)
Translates to: CPAGGTQRPPGSVSG*TGAPGDHHPSPGHQ
Trigger: TTGGTGGCCTGGGCTTGGATGGTGATCACCAGGAGCTCCTGTCCACCCTGACACAGACCCAGGTGGCCGCTGTGTGCCGCCGGCTGGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS CCA 90 bp GCGTGCATCCTCCGCAGCCAAGTCTTGAGGCCTGCGTCGCAGAGCTaGGGGCGCCTGCTGCTACTGTCGTTCAGTTTTCGCACCTGGGCG +
Preference number: 5 (lower is better)
Translates to: ACILRSQVLRPASQS*GRLLLLSFSFRTWA
Trigger: CGCCCAGGTGCGAAAACTGAACGACAGTAGCAGCAGGCGCCCCCAGCTCTGCGACGCAGGCCTCAAGACTTGGCTGCGGAGGATGCACGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS GCA 90 bp CCATCCAAGCCCAGGCCACCAAGGAGGCCCGACAGGCCTGTGTCCTaGAGCCACTGGGATTCAGCTTCCCCTTCCTCTGGAAGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: PSKPRPPRRPDRPVS*SHWDSASPSSGSWP
Trigger: AGGCCAGCTTCCAGAGGAAGGGGAAGCTGAATCCCAGTGGCTGCAGGACACAGGCCTGTCGGGCCTCCTTGGTGGCCTGGGCTTGGATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS CCA 90 bp CCCTTGGAACCAGGGCTGAGGTGCTCTGTGAACTGCCTCAGGACGTaGGCCACTTTGGTGCTGGGGGTGAGAGGCACCTTCAAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: PLEPGLRCSVNCLRT*ATLVLGVRGTFKGS
Trigger: GGACCCCTTGAAGGTGCCTCTCACCCCCAGCACCAAAGTGGCCCACGTCCTGAGGCAGTTCACAGAGCACCTCAGCCCTGGTTCCAAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp CTCCCGCCCCCGGTGGTTGTGGGTTCAAGGCGTGGCTGGATCACATGGGCCAGAATGGGCCAGAGCCCTTaGAGCAGCTCAGCAAGATGC +
Preference number: 5 (lower is better)
Translates to: LPPPVVVGSRRGWITWARMGQSP*SSSARC
Trigger: GCATCTTGCTGAGCTGCTCAAAGGGCTCTGGCCCAT...TCTGGCCCATGTGATCCAGCCACGCCTTGAACCCACAACCACCGGGGGCGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS GCA 90 bp CTTGTCCCTGTCTGCGTGCATCCTCCGCAGCCAAGTCTTGAGGCCTaGGTCGCAGAGCTGGGGGCGCCTGCTGCTACTGTCGTTCAGTTT +
Preference number: 5 (lower is better)
Translates to: LVPVCVHPPQPSLEA*VAELGAPAATVVQF
Trigger: AAACTGAACGACAGTAGCAGCAGGCGCCCCCAGCTCTGCGACGCAGGCCTCAAGACTTGGCTGCGGAGGATGCACGCAGACAGGGACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp GTTCTCTTCCTGCCCTCCCGCCCCCGGTGGTTGTGGGTTCAAGGCGTGGCTGGACACTGGACATGCGGGTaGGCACGGTACAGATCTAAG +
Preference number: 5 (lower is better)
Translates to: VLFLPSRPRWLWVQGVAGHWTCG*ARYRSK
Trigger: CTTAGATCTGTACCGTGCCAACCCGCATGTCCAGTG...TCCAGCCACGCCTTGAACCCACAACCACCGGGGGCGGGAGGGCAGGAAGAGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR CAA 90 bp TCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGATCTTTGCCACCTaGGGAGTCGCCTCGAGGCCG +
Preference number: 5 (lower is better)
Translates to: SSSLEATDRSPWRSKRPKWIFAT*GVASRP
Trigger: CGGCCTCGAGGCGACTCCCAAGGTGGCAAAGATCCA...CTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp TTTCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGGACGTGGGCCACTTaGGTGCTGGGGGTGAGAGGC +
Preference number: 5 (lower is better)
Translates to: FPPVWKPQTEAHGDPSAPRTWAT*VLGVRG
Trigger: GCCTCTCACCCCCAGCACCAAAGTGGCCCACGTCCT...TGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp GCCCTCCCGCCCCCGGTGGTTGTGGGTTCAAGGCGTGGCTGGATCACATGGGCCTCCAGGCGATGCTCATaGATATTCCCTCCAACTTCA +
Preference number: 5 (lower is better)
Translates to: ALPPPVVVGSRRGWITWASRRCS*IFPPTS
Trigger: TGAAGTTGGAGGGAATATCAATGAGCATCGCCTGGA...GGCCCATGTGATCCAGCCACGCCTTGAACCCACAACCACCGGGGGCGGGAGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS CCA 90 bp CCAAACAGGACAGCAGGGCTTGAAGGACCAGCGGGACCTGTGTGCTaGGGAGGACTTTGTGGTCAGCTTCTAGCAGGCTGTCAAGGGGCA +
Preference number: 5 (lower is better)
Translates to: PNRTAGLEGPAGPVC*GGLCGQLLAGCQGA
Trigger: TGCCCCTTGACAGCCTGCTAGAAGCTGACCACAAAGTCCTCCCCAGCACACAGGTCCCGCTGGTCCTTCAAGCCCTGCTGTCCTGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS-3UTR CAA 90 bp AAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATATTCGGCAGGGAACACTaGCCCCAGGCAGAGGTGCCT +
Preference number: 5 (lower is better)
Translates to: KPQTEAHGDPSAPSGGVIFGREH*PQAEVP
Trigger: AGGCACCTCTGCCTGGGGCAAGTGTTCCCTGCCGAA...TATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp CCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTTCTGTTCCAGCCCCTaGACCCTGGCCTGGGATCCG +
Preference number: 5 (lower is better)
Translates to: PSAPSGGVIQQAWCRKQLFCSSP*TLAWDP
Trigger: CGGATCCCAGGCCAGGGTCAAGGGGCTGGAACAGAA...GAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGCGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp ATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGAGAGGAGAGGCCGTCCCCCGCCTaGTCCCTGTCTGCGTGCATC +
Preference number: 5 (lower is better)
Translates to: IALFSCWVHGHRASRGEERPSPA*SLSACI
Trigger: GATGCACGCAGACAGGGACAAGGCGGGGGACGGCCT...CTCCTCTCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp CCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGAAGGCCGTCCCCCGCCTaGTCCCTGTCTGCGTGCATC +
Preference number: 5 (lower is better)
Translates to: PGIALFSCWVHGHRASRGRPSPA*SLSACI
Trigger: GATGCACGCAGACAGGGACAAGGCGGGGGACGGCCT...TCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp CCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTGGATCTTTGCCACCTaGGGAGTCGCCTCGAGGCCG +
Preference number: 5 (lower is better)
Translates to: PSAPSGGVIQQAWCRKQLWIFAT*GVASRP
Trigger: CGGCCTCGAGGCGACTCCCAAGGTGGCAAAGATCCA...GAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGCGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp GTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCAGACCACCTGGATCTTaGCCACCTTGGGAGTCGCCT +
Preference number: 5 (lower is better)
Translates to: VWKPQTEAHGDPSAPSGGRPPGS*PPWESP
Trigger: AGGCGACTCCCAAGGTGGCAAAGATCCAGGTGGTCT...GCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp GCCCCAAGTGGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGAAGGACGTGGGCCACTTaGGTGCTGGGGGTGAGAGGC +
Preference number: 5 (lower is better)
Translates to: APSGGVIQQAWCRKQLSGRTWAT*VLGVRG
Trigger: GCCTCTCACCCCCAGCACCAAAGTGGCCCACGTCCT...TCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS TCA 90 bp GACATCCCTGACATCTCTGACAGGTGTCTTGTGTTGTCTTCGCACTaGGCGAGCATAGATGTCCAGCCGGCGGCACACAGCGGCCACCTG +
Preference number: 5 (lower is better)
Translates to: DIPDISDRCLVLSSH*ASIDVQPAAHSGHL
Trigger: CAGGTGGCCGCTGTGTGCCGCCGGCTGGACATCTATGCTCGCTCAGTGCGAAGACAACACAAGACACCTGTCAGAGATGTCAGGGATGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS CCA 90 bp AGCTCAGCAAGATGCTCTCGTCACCAAGCTCCCACGTCAACTCGCTaGAAGGACAACACCTACCGAGCACTGGACATGCGGGTTGGCACG +
Preference number: 5 (lower is better)
Translates to: SSARCSRHQAPTSTR*KDNTYRALDMRVGT
Trigger: CGTGCCAACCCGCATGTCCAGTGCTCGGTAGGTGTTGTCCTTCCAGCGAGTTGACGTGGGAGCTTGGTGACGAGAGCATCTTGCTGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS GCA 90 bp TTTCCAAACAGGACAGCAGGGCTTGAAGGACCAGCGGGACCTGTGTaGTGGGGAGGACTTTGTGGTCAGCTTCTAGCAGGCTGTCAAGGG +
Preference number: 5 (lower is better)
Translates to: FPNRTAGLEGPAGPV*WGGLCGQLLAGCQG
Trigger: CCCTTGACAGCCTGCTAGAAGCTGACCACAAAGTCCTCCCCAGCACACAGGTCCCGCTGGTCCTTCAAGCCCTGCTGTCCTGTTTGGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS CCA 90 bp CCACCTCCATCCAAAAGCCATCCATGCTGGAGCTCTCCACTCCAGTaGAACAGCCAGCAGAGCCAGCAGGGTGTAGTCGCAGGAGATTCT +
Preference number: 5 (lower is better)
Translates to: PPPSKSHPCWSSPLQ*NSQQSQQGVVAGDS
Trigger: AGAATCTCCTGCGACTACACCCTGCTGGCTCTGCTGGCTGTTCCACTGGAGTGGAGAGCTCCAGCATGGATGGCTTTTGGATGGAGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp AAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATAACGCCAAGTCTGCCTTaGGGGACGGTAAACTTCGGC +
Preference number: 5 (lower is better)
Translates to: KPQTEAHGDPSAPSGGVITPSLP*GTVNFG
Trigger: GCCGAAGTTTACCGTCCCCAAAGGCAGACTTGGCGT...TATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp AGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGTTCCTCAGAGTCATCTaGTTGTGCTGTTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SLEATDRSPWRSKRPKWWFLRVI*LCCSRA
Trigger: GGCCCGGGAACAGCACAACAAGATGACTCTGAGGAA...CCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp ACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGGCCAGCTGCTTCTCCTaGCCTTTGGGGAGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: TLPWNSFVLMLGTWTQSQASCFS*PLGSLG
Trigger: CCCCAAGCTCCCCAAAGGCAAGGAGAAGCAGCTGGC...CTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp GCTCTCCTGGTTTTGTCTCTGGTGCTGCTGCTACTACACATTGTAGGGCCACTTCTCCGCAGCCAAGTCTaGAGGCCTGCGTCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: ALLVLSLVLLLLHIVGPLLRSQV*RPASQS
Trigger: GCTCTGCGACGCAGGCCTCAAGACTTGGCTGCGGAG...AAGTGGCCCTACAATGTGTAGTAGCAGCAGCACCAGAGACAAAACCAGGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp CTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGACTCCGCAGCCAAGTCTaGAGGCCTGCGTCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: LRPSPGIALFSCWVHGHRLRSQV*RPASQS
Trigger: GCTCTGCGACGCAGGCCTCAAGACTTGGCTGCGGAG...TCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp TCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGCACTCACCATGCGGGTaGGCACGGTACAGATCTAAG +
Preference number: 5 (lower is better)
Translates to: SSSLEATDRSPWRSKRPKHSPCG*ARYRSK
Trigger: CTTAGATCTGTACCGTGCCAACCCGCATGGTGAGTG...CTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp TTTCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCACACTCACCATGCGGGTaGGCACGGTACAGATCTAAG +
Preference number: 5 (lower is better)
Translates to: FPPVWKPQTEAHGDPSAPHSPCG*ARYRSK
Trigger: CTTAGATCTGTACCGTGCCAACCCGCATGGTGAGTG...TGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS TCA 90 bp TCTTCAGGTCCAAGCCGAGGATGTCACAGAGCGCGGTCAGCTCTATaGGGGCCAGAGAAGGTACCTTCCTCATATCCTGCAGGGACAAGT +
Preference number: 5 (lower is better)
Translates to: SSGPSRGCHRARSAL*GPEKVPSSYPAGTS
Trigger: ACTTGTCCCTGCAGGATATGAGGAAGGTACCTTCTCTGGCCCTCATAGAGCTGACCGCGCTCTGTGACATCCTCGGCTTGGACCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS GCA 90 bp TTAGGGGCCATCACGGTGGAAACATTCCTCAGAGTCATCTTGTTGTaGTGTTCCCGGGCCACCACCTTCCTGAGGAATTCCAGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: LGAITVETFLRVILL*CSRATTFLRNSSSA
Trigger: GGCACTGCTGGAATTCCTCAGGAAGGTGGTGGCCCGGGAACAGCACAACAAGATGACTCTGAGGAATGTTTCCACCGTGATGGCCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS-3UTR CAA 90 bp AGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGTCTCTGACAGGTGTCTaGTGTTGTCTTCGCACTGAG +
Preference number: 5 (lower is better)
Translates to: SLEATDRSPWRSKRPKWWSLTGV*CCLRTE
Trigger: CTCAGTGCGAAGACAACACAAGACACCTGTCAGAGA...CCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp CCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGATTCCACTTCCCCGCCTaGCTCCTCTTCAGGTCCAAG +
Preference number: 5 (lower is better)
Translates to: PGIALFSCWVHGHRASRGFHFPA*LLFRSK
Trigger: CTTGGACCTGAAGAGGAGCAAGGCGGGGAAGTGGAA...TCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp CCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGAAGACCACCTGGATCTTaGCCACCTTGGGAGTCGCCT +
Preference number: 5 (lower is better)
Translates to: PGIALFSCWVHGHRASRGRPPGS*PPWESP
Trigger: AGGCGACTCCCAAGGTGGCAAAGATCCAGGTGGTCT...TCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp AAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATAAGAGCTCTCCTGGTTTaGTCTCTGGTGCTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: KPQTEAHGDPSAPSGGVIRALLV*SLVLLL
Trigger: TAGCAGCAGCACCAGAGACAAAACCAGGAGAGCTCT...TATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp AGTGGAGAGAGCACCACCCCTGAGTCTATTTCTGAGGGGTCTGAGAGGCATTTCGTCCTCACTGTCTTCTaGACCCTTGGAACCAGGGCT +
Preference number: 5 (lower is better)
Translates to: SGESTTPESISEGSERHFVLTVF*TLGTRA
Trigger: AGCCCTGGTTCCAAGGGTCAAGAAGACAGTGAGGAC...GAAATGCCTCTCAGACCCCTCAGAAATAGACTCAGGGGTGGTGCTCTCTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp CTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGTCCTCACTGTCTTCTaGACCCTTGGAACCAGGGCT +
Preference number: 5 (lower is better)
Translates to: LRPSPGIALFSCWVHGHRVLTVF*TLGTRA
Trigger: AGCCCTGGTTCCAAGGGTCAAGAAGACAGTGAGGAC...TCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp CCAAGCGCCCCAAGTGGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCCAGGCGATGCTCATaGATATTCCCTCCAACTTCA +
Preference number: 5 (lower is better)
Translates to: PSAPSGGVIQQAWCRKQLSRRCS*IFPPTS
Trigger: TGAAGTTGGAGGGAATATCAATGAGCATCGCCTGGA...GAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGCGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp AAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGTGGTGGCGTCATATCCCCTGGAATAGCTTaGTTCTCATGCTGGGTACAT +
Preference number: 5 (lower is better)
Translates to: KPQTEAHGDPSAPSGGVISPGIA*FSCWVH
Trigger: ATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGA...TATGACGCCACCACTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp CTTGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTAAGGCGCTGCTTCAGGTaGGGGATGTTAGGCACCACG +
Preference number: 5 (lower is better)
Translates to: LGIKLRPSPGIALFSCWVRRCFR*GMLGTT
Trigger: CGTGGTGCCTAACATCCCCAACCTGAAGCAGCGCCT...TACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp GCCCCAAGTGGTGGCGTCATACAGCAAGCTTGGTGTAGGAAGCAACTCTCTGGATTTAAGGCATTTCTGTaGGGTTCTGGGAGGATGAGG +
Preference number: 5 (lower is better)
Translates to: APSGGVIQQAWCRKQLSGFKAFL*GSGRMR
Trigger: CCTCATCCTCCCAGAACCCAACAGAAATGCCTTAAA...TCCAGAGAGTTGCTTCCTACACCAAGCTTGCTGTATGACGCCACCACTTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp CCCTTCAGCAATGGGTATCATTACTCCATGCCTCCCCATTCTGAGTTCTCTTCCGTCCTCACTGTCTTCTaGACCCTTGGAACCAGGGCT +
Preference number: 5 (lower is better)
Translates to: PFSNGYHYSMPPHSEFSSVLTVF*TLGTRA
Trigger: AGCCCTGGTTCCAAGGGTCAAGAAGACAGTGAGGAC...GGAAGAGAACTCAGAATGGGGAGGCATGGAGTAATGATACCCATTGCTGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS-3UTR CAA 90 bp AGTGGAGAGAGCACCACCCCTGAGTCTATTTCTGAGGGGTCTGAGAGGCATTTCAGGGGAGTGAGGGCATaGTGTGCACGGTTAAAACAT +
Preference number: 5 (lower is better)
Translates to: SGESTTPESISEGSERHFRGVRA*CARLKH
Trigger: ATGTTTTAACCGTGCACACAATGCCCTCACTCCCCT...GAAATGCCTCTCAGACCCCTCAGAAATAGACTCAGGGGTGGTGCTCTCTCCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp TCCTCCAGTCTGGAAGCCACAGACAGAAGCCCATGGAGATCCAAGCGCCCCAAGGACCCCAACTACCTCTaGATAAAGGTACTGCATTTT +
Preference number: 5 (lower is better)
Translates to: SSSLEATDRSPWRSKRPKDPNYL*IKVLHF
Trigger: AAAATGCAGTACCTTTATCAAGAGGTAGTTGGGGTC...CTTGGGGCGCTTGGATCTCCATGGGCTTCTGTCTGTGGCTTCCAGACTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp TGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACACTCAGAGTCATCTTGTaGTGCTGTTCCCGGGCCACC +
Preference number: 5 (lower is better)
Translates to: WNKTQTLPWNSFVLMLGTLRVIL*CCSRAT
Trigger: GGTGGCCCGGGAACAGCACAACAAGATGACTCTGAG...TGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp ATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGAGAGGAGTCCCCTGGAATAGCTTaGTTCTCATGCTGGGTACAT +
Preference number: 5 (lower is better)
Translates to: IALFSCWVHGHRASRGEESPGIA*FSCWVH
Trigger: ATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGA...CTCCTCTCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp CCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGACACAGAGCCAGCAGGGGAGACCCCAACTACCTCTaGATAAAGGTACTGCATTTT +
Preference number: 5 (lower is better)
Translates to: PGIALFSCWVHGHRASRGDPNYL*IKVLHF
Trigger: AAAATGCAGTACCTTTATCAAGAGGTAGTTGGGGTC...TCCCCTGCTGGCTCTGTGTCCATGTACCCAGCATGAGAACAAAGCTATTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp ATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGAAGGGGAGTGAGGGCATaGTGTGCACGGTTAAAACAT +
Preference number: 5 (lower is better)
Translates to: IKLRPSPGIALFSCWVHGRGVRA*CARLKH
Trigger: ATGTTTTAACCGTGCACACAATGCCCTCACTCCCCT...TCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373345.8
ENST00000373346.7
CDS-3UTR CAA 90 bp AGGAAGCCTTGGAATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGTTCCGGATGAACCTTTaGAGCAAATCAGAGGCGTCA +
Preference number: 5 (lower is better)
Translates to: RKPWNKTQTLPWNSFVLMFRMNL*SKSEAS
Trigger: TGACGCCTCTGATTTGCTCAAAAGGTTCATCCGGAA...CATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTATTCCAAGGCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp TCTGGTGCTGCTGCTACTACACATTGTAGGGCCACTTTCGAAACAATTTTGCCTTCCAGGCGATGCTCATaGATATTCCCTCCAACTTCA +
Preference number: 5 (lower is better)
Translates to: SGAAATTHCRATFETILPSRRCS*IFPPTS
Trigger: TGAAGTTGGAGGGAATATCAATGAGCATCGCCTGGA...AGGCAAAATTGTTTCGAAAGTGGCCCTACAATGTGTAGTAGCAGCAGCACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS-3UTR CAA 90 bp ATAAAACTCAGACCCTCCCCTGGAATAGCTTTGTTCTCATGCTGGGTACATGGAGACATTTTCCCTGAATaGAAGACCCCAAAGACATCC +
Preference number: 5 (lower is better)
Translates to: IKLRPSPGIALFSCWVHGDIFPE*KTPKTS
Trigger: GGATGTCTTTGGGGTCTTCAATTCAGGGAAAATGTC...TCCATGTACCCAGCATGAGAACAAAGCTATTCCAGGGGAGGGTCTGAGTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS CCA 72 bp TGCAGCCCAGGTCGGCCCAGCGCTGGGCGCAGCGCCTaGCAATGCGGGCCCGCGGGATCCGAGGACACGGTG +
Preference number: 6 (lower is better)
Translates to: CSPGRPSAGRSA*QCGPAGSEDTV
Trigger: CACCGTGTCCTCGGATCCCGCGGGCCCGCATTGCCAGGCGCTGCGCCCAGCGCTGGGCCGACCTGGGCTGCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS GCA 72 bp CCAGGTCGGCCCAGCGCTGGGCGCAGCGCCTGGCAATaGGGGCCCGCGGGATCCGAGGACACGGTGAGGCTA +
Preference number: 6 (lower is better)
Translates to: PGRPSAGRSAWQ*GPAGSEDTVRL
Trigger: TAGCCTCACCGTGTCCTCGGATCCCGCGGGCCCGCATTGCCAGGCGCTGCGCCCAGCGCTGGGCCGACCTGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS GCA 72 bp GCCTCGAGGCCGTCCCCCGCCTTGTCCCTGTCTGCGTaGATCCTCCGCAGCCAAGTCTTGAGGCCTGCGTCG +
Preference number: 6 (lower is better)
Translates to: ASRPSPALSLSA*ILRSQVLRPAS
Trigger: CGACGCAGGCCTCAAGACTTGGCTGCGGAGGATGCACGCAGACAGGGACAAGGCGGGGGACGGCCTCGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS CAA 72 bp GCCACCTTGGGAGTCGCCTCGAGGCCGTCCCCCGCCTaGTCCCTGTCTGCGTGCATCCTCCGCAGCCAAGTC +
Preference number: 6 (lower is better)
Translates to: ATLGVASRPSPA*SLSACILRSQV
Trigger: GACTTGGCTGCGGAGGATGCACGCAGACAGGGACAAGGCGGGGGACGGCCTCGAGGCGACTCCCAAGGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS CAA 90 bp TCCCCCGCCTTGTCCCTGTCTGCGTGCATCCTCCGCAGCCAAGTCTaGAGGCCTGCGTCGCAGAGCTGGGGGCGCCTGCTGCTACTGTCG +
Preference number: 6 (lower is better)
Translates to: SPALSLSACILRSQV*RPASQSWGRLLLLS
Trigger: CGACAGTAGCAGCAGGCGCCCCCAGCTCTGCGACGCAGGCCTCAAGACTTGGCTGCGGAGGATGCACGCAGACAGGGACAAGGCGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS TCA 72 bp TGTCCCTGTCTGCGTGCATCCTCCGCAGCCAAGTCTTaGGGCCTGCGTCGCAGAGCTGGGGGCGCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CPCLRASSAAKS*GLRRRAGGACC
Trigger: GCAGCAGGCGCCCCCAGCTCTGCGACGCAGGCCTCAAGACTTGGCTGCGGAGGATGCACGCAGACAGGGACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS CAA 72 bp TTGTCCCTGTCTGCGTGCATCCTCCGCAGCCAAGTCTaGAGGCCTGCGTCGCAGAGCTGGGGGCGCCTGCTG +
Preference number: 6 (lower is better)
Translates to: LSLSACILRSQV*RPASQSWGRLL
Trigger: CAGCAGGCGCCCCCAGCTCTGCGACGCAGGCCTCAAGACTTGGCTGCGGAGGATGCACGCAGACAGGGACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS GCA 72 bp CAAGGGGTCCTTGATAGGCCAGACCACCTGGATCTTTaGCACCTTGGGAGTCGCCTCGAGGCCGTCCCCCGC +
Preference number: 6 (lower is better)
Translates to: QGVLDRPDHLDL*HLGSRLEAVPR
Trigger: GCGGGGGACGGCCTCGAGGCGACTCCCAAGGTGGCAAAGATCCAGGTGGTCTGGCCTATCAAGGACCCCTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS GCA 72 bp CCCAGGCCACCAAGGAGGCCCGACAGGCCTGTGTCCTaGAGCCACTGGGATTCAGCTTCCCCTTCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: PRPPRRPDRPVS*SHWDSASPSSG
Trigger: TCCAGAGGAAGGGGAAGCTGAATCCCAGTGGCTGCAGGACACAGGCCTGTCGGGCCTCCTTGGTGGCCTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS CCA 72 bp GGCGGCACACAGCGGCCACCTGGGTCTGTGTCAGGGTaGACAGGAGCTCCTGGTGATCACCATCCAAGCCCA +
Preference number: 6 (lower is better)
Translates to: GGTQRPPGSVSG*TGAPGDHHPSP
Trigger: TGGGCTTGGATGGTGATCACCAGGAGCTCCTGTCCACCCTGACACAGACCCAGGTGGCCGCTGTGTGCCGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS CAA 90 bp TGGATCTTTGCCACCTTGGGAGTCGCCTCGAGGCCGTCCCCCGCCTaGTCCCTGTCTGCGTGCATCCTCCGCAGCCAAGTCTTGAGGCCT +
Preference number: 6 (lower is better)
Translates to: WIFATLGVASRPSPA*SLSACILRSQVLRP
Trigger: AGGCCTCAAGACTTGGCTGCGGAGGATGCACGCAGACAGGGACAAGGCGGGGGACGGCCTCGAGGCGACTCCCAAGGTGGCAAAGATCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS CCA 72 bp CTCCGCAGCCAAGTCTTGAGGCCTGCGTCGCAGAGCTaGGGGCGCCTGCTGCTACTGTCGTTCAGTTTTCGC +
Preference number: 6 (lower is better)
Translates to: LRSQVLRPASQS*GRLLLLSFSFR
Trigger: GCGAAAACTGAACGACAGTAGCAGCAGGCGCCCCCAGCTCTGCGACGCAGGCCTCAAGACTTGGCTGCGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS CCA 72 bp CCAGGGCTGAGGTGCTCTGTGAACTGCCTCAGGACGTaGGCCACTTTGGTGCTGGGGGTGAGAGGCACCTTC +
Preference number: 6 (lower is better)
Translates to: PGLRCSVNCLRT*ATLVLGVRGTF
Trigger: GAAGGTGCCTCTCACCCCCAGCACCAAAGTGGCCCACGTCCTGAGGCAGTTCACAGAGCACCTCAGCCCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS CAA 90 bp CCAGGGCTGAGGTGCTCTGTGAACTGCCTCAGGACGTGGGCCACTTaGGTGCTGGGGGTGAGAGGCACCTTCAAGGGGTCCTTGATAGGC +
Preference number: 6 (lower is better)
Translates to: PGLRCSVNCLRTWAT*VLGVRGTFKGSLIG
Trigger: GCCTATCAAGGACCCCTTGAAGGTGCCTCTCACCCCCAGCACCAAAGTGGCCCACGTCCTGAGGCAGTTCACAGAGCACCTCAGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS CCA 72 bp GGGCGCCTGCTGCTACTGTCGTTCAGTTTTCGCACCTaGGCGACCAGGAAAGAGGCGACCGTCCACAGCAGA +
Preference number: 6 (lower is better)
Translates to: GRLLLLSFSFRT*ATRKEATVHSR
Trigger: TCTGCTGTGGACGGTCGCCTCTTTCCTGGTCGCCCAGGTGCGAAAACTGAACGACAGTAGCAGCAGGCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS CAA 72 bp AGGTGCTCTGTGAACTGCCTCAGGACGTGGGCCACTTaGGTGCTGGGGGTGAGAGGCACCTTCAAGGGGTCC +
Preference number: 6 (lower is better)
Translates to: RCSVNCLRTWAT*VLGVRGTFKGS
Trigger: GGACCCCTTGAAGGTGCCTCTCACCCCCAGCACCAAAGTGGCCCACGTCCTGAGGCAGTTCACAGAGCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS CAA 90 bp TGGGCCACTTTGGTGCTGGGGGTGAGAGGCACCTTCAAGGGGTCCTaGATAGGCCAGACCACCTGGATCTTTGCCACCTTGGGAGTCGCC +
Preference number: 6 (lower is better)
Translates to: WATLVLGVRGTFKGS*IGQTTWIFATLGVA
Trigger: GGCGACTCCCAAGGTGGCAAAGATCCAGGTGGTCTGGCCTATCAAGGACCCCTTGAAGGTGCCTCTCACCCCCAGCACCAAAGTGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS TCA 72 bp GCAGGGTGTAGTCGCAGGAGATTCTTCTGGGGAAGCTaGTCCATTCGGCCTGAGGAGGGGCCAGAGCTGCAG +
Preference number: 6 (lower is better)
Translates to: AGCSRRRFFWGS*SIRPEEGPELQ
Trigger: CTGCAGCTCTGGCCCCTCCTCAGGCCGAATGGATCAGCTTCCCCAGAAGAATCTCCTGCGACTACACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS CCA 72 bp GCTGCTGGAGGAAACTTAGAGGCCCCGGAACTGAGCTaGGCCCCCTTCATACCGGAGTCGCCATTCTCTGAC +
Preference number: 6 (lower is better)
Translates to: AAGGNLEAPELS*APFIPESPFSD
Trigger: GTCAGAGAATGGCGACTCCGGTATGAAGGGGGCCCAGCTCAGTTCCGGGGCCTCTAAGTTTCCTCCAGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS CCA 72 bp AGGACCAGCGGGACCTGTGTGCTGGGGAGGACTTTGTaGTCAGCTTCTAGCAGGCTGTCAAGGGGCACACCA +
Preference number: 6 (lower is better)
Translates to: RTSGTCVLGRTL*SASSRLSRGTP
Trigger: TGGTGTGCCCCTTGACAGCCTGCTAGAAGCTGACCACAAAGTCCTCCCCAGCACACAGGTCCCGCTGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS CCA 72 bp ACAGCAGGGCTTGAAGGACCAGCGGGACCTGTGTGCTaGGGAGGACTTTGTGGTCAGCTTCTAGCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: TAGLEGPAGPVC*GGLCGQLLAGC
Trigger: ACAGCCTGCTAGAAGCTGACCACAAAGTCCTCCCCAGCACACAGGTCCCGCTGGTCCTTCAAGCCCTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS CAA 90 bp GGTTGTGGGTTCAAGGCGTGGCTGGATCACATGGGCCAGAGCCCTTaGAGCAGCTCAGCAAGATGCTCTCGTCACCAAGCTCCCACGTCA +
Preference number: 6 (lower is better)
Translates to: GCGFKAWLDHMGQSP*SSSARCSRHQAPTS
Trigger: TGACGTGGGAGCTTGGTGACGAGAGCATCTTGCTGAGCTGCTCAAAGGGCTCTGGCCCATGTGATCCAGCCACGCCTTGAACCCACAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS GCA 72 bp AGAGGCGAGTTTCTGCCGCTTTCCACTTCCCCGCCTTaGTCCTCTTCAGGTCCAAGCCGAGGATGTCACAGA +
Preference number: 6 (lower is better)
Translates to: RGEFLPLSTSPP*SSSGPSRGCHR
Trigger: TCTGTGACATCCTCGGCTTGGACCTGAAGAGGAGCAAGGCGGGGAAGTGGAAAGCGGCAGAAACTCGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS CCA 72 bp TCCAAAAGCCATCCATGCTGGAGCTCTCCACTCCAGTaGAACAGCCAGCAGAGCCAGCAGGGTGTAGTCGCA +
Preference number: 6 (lower is better)
Translates to: SKSHPCWSSPLQ*NSQQSQQGVVA
Trigger: TGCGACTACACCCTGCTGGCTCTGCTGGCTGTTCCACTGGAGTGGAGAGCTCCAGCATGGATGGCTTTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373345.8
CDS CCA 72 bp AGATGCTCTCGTCACCAAGCTCCCACGTCAACTCGCTaGAAGGACAACACCTACCGAGCACTGGACATGCGG +
Preference number: 6 (lower is better)
Translates to: RCSRHQAPTSTR*KDNTYRALDMR
Trigger: CCGCATGTCCAGTGCTCGGTAGGTGTTGTCCTTCCAGCGAGTTGACGTGGGAGCTTGGTGACGAGAGCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000414158.1
CDS CAA 72 bp AAGAGGCGAGTTTCTGCCGCTTTCCACTTCCCCGCCTaGCTCCTCTTCAGGTCCAAGCCGAGGATGTCACAG +
Preference number: 6 (lower is better)
Translates to: KRRVSAAFHFPA*LLFRSKPRMSQ
Trigger: CTGTGACATCCTCGGCTTGGACCTGAAGAGGAGCAAGGCGGGGAAGTGGAAAGCGGCAGAAACTCGCCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS CAA 72 bp TTGGTGCTGGGGGTGAGAGGCACCTTCAAGGGGTCCTaGATAGGCCAGACCACCTGGATCTTTGCCACCTTG +
Preference number: 6 (lower is better)
Translates to: LVLGVRGTFKGS*IGQTTWIFATL
Trigger: CAAGGTGGCAAAGATCCAGGTGGTCTGGCCTATCAAGGACCCCTTGAAGGTGCCTCTCACCCCCAGCACCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000243967.8
ENST00000373345.8
ENST00000373346.7
CDS TCA 72 bp GACATCTCTGACAGGTGTCTTGTGTTGTCTTCGCACTaGGCGAGCATAGATGTCCAGCCGGCGGCACACAGC +
Preference number: 6 (lower is better)
Translates to: DISDRCLVLSSH*ASIDVQPAAHS
Trigger: GCTGTGTGCCGCCGGCTGGACATCTATGCTCGCTCAGTGCGAAGACAACACAAGACACCTGTCAGAGATGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS TCA 72 bp TGGCCTGCTCCTCTGCAGGAGCACCGCAGCTTGTTCTaGGTAGGCAGAGTCCATGTTGAAGGCTTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: WPAPLQEHRSLF*VGRVHVEGFFP
Trigger: AGGGAAGAAGCCTTCAACATGGACTCTGCCTACTCAGAACAAGCTGCGGTGCTCCTGCAGAGGAGCAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS TCA 72 bp CCAAGCCGAGGATGTCACAGAGCGCGGTCAGCTCTATaGGGGCCAGAGAAGGTACCTTCCTCATATCCTGCA +
Preference number: 6 (lower is better)
Translates to: PSRGCHRARSAL*GPEKVPSSYPA
Trigger: TGCAGGATATGAGGAAGGTACCTTCTCTGGCCCTCATAGAGCTGACCGCGCTCTGTGACATCCTCGGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS CAA 72 bp GACAAGTCTCCTATCCTCGTCACGCCAAGTCTGCCTTaGGGGACGGTAAACTTCGGCAGGGAACACTTGCCC +
Preference number: 6 (lower is better)
Translates to: DKSPILVTPSLP*GTVNFGREHLP
Trigger: GGGCAAGTGTTCCCTGCCGAAGTTTACCGTCCCCAAAGGCAGACTTGGCGTGACGAGGATAGGAGACTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS GCA 72 bp TCTATGAGGGCCAGAGAAGGTACCTTCCTCATATCCTaGAGGGACAAGTCTCCTATCCTCGTCACGCCAAGT +
Preference number: 6 (lower is better)
Translates to: SMRAREGTFLIS*RDKSPILVTPS
Trigger: ACTTGGCGTGACGAGGATAGGAGACTTGTCCCTGCAGGATATGAGGAAGGTACCTTCTCTGGCCCTCATAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8
CDS TCA 72 bp TCATCTTGTTGTGCTGTTCCCGGGCCACCACCTTCCTaGGGAATTCCAGCAGTGCCTTTAAGGCATTTCTGT +
Preference number: 6 (lower is better)
Translates to: SSCCAVPGPPPS*GIPAVPLRHFC
Trigger: ACAGAAATGCCTTAAAGGCACTGCTGGAATTCCTCAGGAAGGTGGTGGCCCGGGAACAGCACAACAAGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000243967.8
ENST00000373345.8