RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ARHGAP36 (Homo sapiens)

Ensembl gene IDs: ENSG00000147256

Ensembl transcript IDs: ENST00000276211.10, ENST00000370921.1, ENST00000370922.5, ENST00000412432.6, ENST00000423277.5, ENST00000639280.1

Found 569 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCAAGCCATTGGTCTGAATAATTTGGAGGGGGAAATCCTAAGGTaGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGACATG +
Preference number: 1 (lower is better)
Translates to: WQAIGLNNLEGEILR*WSCCVDTAMGWCDM
Trigger: CATGTCACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCCCTCCAAATTATTCAGACCAATGGCTTGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR TCA 90 bp GCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTaGCCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTA +
Preference number: 1 (lower is better)
Translates to: ASPVKGLAVCLEFSS*PEHQVELLLTFRSL
Trigger: TAAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR CCA 90 bp CAAGCCATTGGTCTGAATAATTTGGAGGGGGAAATCCTAAGGTGGTaGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGACATGATT +
Preference number: 1 (lower is better)
Translates to: QAIGLNNLEGEILRW*SCCVDTAMGWCDMI
Trigger: AATCATGTCACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCCCTCCAAATTATTCAGACCAATGGCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR GCA 90 bp ATTGGTCTGAATAATTTGGAGGGGGAAATCCTAAGGTGGTGGAGTTaGTGCGTGGACACGGCTATGGGTTGGTGTGACATGATTTCGCAT +
Preference number: 1 (lower is better)
Translates to: IGLNNLEGEILRWWS*CVDTAMGWCDMISH
Trigger: ATGCGAAATCATGTCACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCCCTCCAAATTATTCAGACCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR CCA 90 bp GGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAGGTaGAACTCCTTCTTACCTTCAGATCTTTACCTTCAACTCTCTCCT +
Preference number: 1 (lower is better)
Translates to: GWQCVWNSHPDPSIR*NSFLPSDLYLQLSP
Trigger: AGGAGAGAGTTGAAGGTAAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR TCA 90 bp CCAGAAACACTAATTAGACCTACACTTGAGGTTTCCCTGTTGGCGTaGCCTGAGCAAAACTGTACAGAATTTTGGGAGAGGCCATTTGGC +
Preference number: 1 (lower is better)
Translates to: PETLIRPTLEVSLLA*PEQNCTEFWERPFG
Trigger: GCCAAATGGCCTCTCCCAAAATTCTGTACAGTTTTGCTCAGGTCACGCCAACAGGGAAACCTCAAGTGTAGGTCTAATTAGTGTTTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTACCAAGCATCCCCAGTaGAGGGGCTGGCAGTGTGTT +
Preference number: 2 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCTKHPQ*RGWQCV
Trigger: AACACACTGCCAGCCCCTTCACTGGGGATGCTTGGT...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGACCCGAGCATCAGGTaGAACTCCTTCTTACCTTCA +
Preference number: 2 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCDPSIR*NSFLPS
Trigger: TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCCCTTTTCCCCTGTCTaGCACCTTATAGAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: PSIPSEGAGSVFGILILTPFSPV*HLIEGK
Trigger: TTTTCCTTCTATAAGGTGCCAGACAGGGGAAAAGGG...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTATTTGTGAGGTTCCCTaGGAAAGGTGTTTACCACAA +
Preference number: 2 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCICEVP*ERCLPQ
Trigger: TTGTGGTAAACACCTTTCCCAGGGAACCTCACAAAT...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR CAA 90 bp AGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTaGGAGGGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACG +
Preference number: 2 (lower is better)
Translates to: RILGEAIWQAIGLNN*EGEILRWWSCCVDT
Trigger: CGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCCCTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGACCAAGCATCCCCAGTaGAGGGGCTGGCAGTGTGTT +
Preference number: 2 (lower is better)
Translates to: SAVILDHMQPISVCYQSMTKHPQ*RGWQCV
Trigger: AACACACTGCCAGCCCCTTCACTGGGGATGCTTGGT...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGGGTGGAGTTGCTGCGTaGACACGGCTATGGGTTGGT +
Preference number: 2 (lower is better)
Translates to: SAVILDHMQPISVCYQSMGGVAA*TRLWVG
Trigger: ACCAACCCATAGCCGTGTCCACGCAGCAACTCCACC...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGCGGGGAGCTTGGGCATaGCACAGAAACATCTCTGCT +
Preference number: 2 (lower is better)
Translates to: YRILGEAIWQAIGLNNLERGAWA*HRNISA
Trigger: AGCAGAGATGTTTCTGTGTCATGCCCAAGCTCCCCG...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR GCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGCTAAGGTGGTGGAGTTaGTGCGTGGACACGGCTATG +
Preference number: 2 (lower is better)
Translates to: YRILGEAIWQAIGLNNLELRWWS*CVDTAM
Trigger: CATAGCCGTGTCCACGCAGCAACTCCACCACCTTAG...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGGGCTGGCAGTGTGTTTaGAATTCTCATCCTGACCCG +
Preference number: 2 (lower is better)
Translates to: GKHLKICEVPWERCLPQMGWQCV*NSHPDP
Trigger: CGGGTCAGGATGAGAATTCCAAACACACTGCCAGCC...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGGGGGAAATCCTAAGGTaGTGGAGTTGCTGCGTGGAC +
Preference number: 2 (lower is better)
Translates to: SAVILDHMQPISVCYQSMGEILR*WSCCVD
Trigger: GTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAACCAAGCATCCCCAGTaGAGGGGCTGGCAGTGTGTT +
Preference number: 2 (lower is better)
Translates to: EHVPQFCTVLYKGITETITKHPQ*RGWQCV
Trigger: AACACACTGCCAGCCCCTTCACTGGGGATGCTTGGT...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR GCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCAGGTGGTGGAGTTGCTaGGTGGACACGGCTATGGGT +
Preference number: 2 (lower is better)
Translates to: AVVIHNISCNSGSYATHIRWWSC*VDTAMG
Trigger: ACCCATAGCCGTGTCCACGCAGCAACTCCACCACCT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR GCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAAGGTGGTGGAGTTGCTaGGTGGACACGGCTATGGGT +
Preference number: 2 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITRWWSC*VDTAMG
Trigger: ACCCATAGCCGTGTCCACGCAGCAACTCCACCACCT...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCACCCTTTTCCCCTGTCTaGCACCTTATAGAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSPFSPV*HLIEGK
Trigger: TTTTCCTTCTATAAGGTGCCAGACAGGGGAAAAGGG...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATACGGGGAGCTTGGGCATaGCACAGAAACATCTCTGCT +
Preference number: 2 (lower is better)
Translates to: EHVPQFCTVLYKGITETIRGAWA*HRNISA
Trigger: AGCAGAGATGTTTCTGTGTCATGCCCAAGCTCCCCG...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR GCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGCCTAACGTTCTAGCATaGCTCTTGAGGGCCTTTCCA +
Preference number: 2 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEPNVLA*LLRAFP
Trigger: TGGAAAGGCCCTCAAGAGGCATGCTAGAACGTTAGG...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR GCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCCTAAGGTGGTGGAGTTaGTGCGTGGACACGGCTATG +
Preference number: 2 (lower is better)
Translates to: AVVIHNISCNSGSYATHILRWWS*CVDTAM
Trigger: CATAGCCGTGTCCACGCAGCAACTCCACCACCTTAG...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR GCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGAAGTCAGGGAAATCATaGAATCCCATCTGGGGAAGG +
Preference number: 2 (lower is better)
Translates to: SAVILDHMQPISVCYQSMKSGKS*NPIWGR
Trigger: CCTTCCCCAGATGGGATTGCATGATTTCCCTGACTT...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTTCCCCTGTCTaGCACCTTATAGAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPPFSPV*HLIEGK
Trigger: TTTTCCTTCTATAAGGTGCCAGACAGGGGAAAAGGG...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAGGCTGGCAGTGTGTTTaGAATTCTCATCCTGACCCG +
Preference number: 2 (lower is better)
Translates to: EHVPQFCTVLYKGITETIGWQCV*NSHPDP
Trigger: CGGGTCAGGATGAGAATTCCAAACACACTGCCAGCC...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGTCATGCAATCCCATCTaGGGAAGGGAAAGCATCTCA +
Preference number: 2 (lower is better)
Translates to: YRILGEAIWQAIGLNNLESCNPI*GRESIS
Trigger: TGAGATGCTTTCCCTTCCCCAGATGGGATTGCATGA...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGGACACGGCTATGGGTTaGTGTGACATGATTTCGCAT +
Preference number: 2 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEDTAMG*CDMISH
Trigger: ATGCGAAATCATGTCACACCAACCCATAGCCGTGTC...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGTTGAGGTTTCCCTGTTaGCGTGACCTGAGCAAAACT +
Preference number: 2 (lower is better)
Translates to: SAVILDHMQPISVCYQSMLRFPC*RDLSKT
Trigger: AGTTTTGCTCAGGTCACGCCAACAGGGAAACCTCAA...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAGCATCTCAAGATTTGTaGGGTTCCCTGGGAAAGGTG +
Preference number: 2 (lower is better)
Translates to: EHVPQFCTVLYKGITETIASQDL*GSLGKV
Trigger: CACCTTTCCCAGGGAACCTCACAAATCTTGAGATGC...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAGTTTCCCTGTTGGCGTaGCCTGAGCAAAACTGTACA +
Preference number: 2 (lower is better)
Translates to: EHVPQFCTVLYKGITETIVSLLA*PEQNCT
Trigger: TGTACAGTTTTGCTCAGGTCACGCCAACAGGGAAAC...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGTTTCCCTGTTGGCGTaGCCTGAGCAAAACTGTACA +
Preference number: 2 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITVSLLA*PEQNCT
Trigger: TGTACAGTTTTGCTCAGGTCACGCCAACAGGGAAAC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGCCCTTTTCCCCTGTCTaGCACCTTATAGAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEPFSPV*HLIEGK
Trigger: TTTTCCTTCTATAAGGTGCCAGACAGGGGAAAAGGG...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGGCTGGCAGTGTGTTTaGAATTCTCATCCTGACCCG +
Preference number: 2 (lower is better)
Translates to: CLPQMSHQLKESLQREREGWQCV*NSHPDP
Trigger: CGGGTCAGGATGAGAATTCCAAACACACTGCCAGCC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCCCTGTTGGCGTGACCTaGGCAAAACTGTACAGAATT +
Preference number: 2 (lower is better)
Translates to: AVVIHNISCNSGSYATHIPVGVT*AKLYRI
Trigger: AATTCTGTACAGTTTTGCTCAGGTCACGCCAACAGG...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATACCTGTTGGCGTGACCTaGGCAAAACTGTACAGAATT +
Preference number: 2 (lower is better)
Translates to: EHVPQFCTVLYKGITETIPVGVT*AKLYRI
Trigger: AATTCTGTACAGTTTTGCTCAGGTCACGCCAACAGG...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCTTGGGAGAGGCCATTTaGCAAGCCATTGGTCTGAAT +
Preference number: 2 (lower is better)
Translates to: AVVIHNISCNSGSYATHILGEAI*QAIGLN
Trigger: ATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAA...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATATTGAGGTTTCCCTGTTaGCGTGACCTGAGCAAAACT +
Preference number: 2 (lower is better)
Translates to: EHVPQFCTVLYKGITETILRFPC*RDLSKT
Trigger: AGTTTTGCTCAGGTCACGCCAACAGGGAAACCTCAA...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGTGGGTTGGTGTGACATaGTTTCGCATTAATTGTTTG +
Preference number: 2 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEWVGVT*FRINCL
Trigger: CAAACAATTAATGCGAAATCATGTCACACCAACCCA...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR GCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGACACAGAAACATCTCTaGTTTTACCAGCAGAAGAGA +
Preference number: 2 (lower is better)
Translates to: YRILGEAIWQAIGLNNLETQKHL*FYQQKR
Trigger: TCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGGCTATGGGTTGGTGTaGCATGATTTCGCATTAATT +
Preference number: 2 (lower is better)
Translates to: AVVIHNISCNSGSYATHIGYGLV*HDFALI
Trigger: AATTAATGCGAAATCATGTCACACCAACCCATAGCC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAGGCTATGGGTTGGTGTaGCATGATTTCGCATTAATT +
Preference number: 2 (lower is better)
Translates to: EHVPQFCTVLYKGITETIGYGLV*HDFALI
Trigger: AATTAATGCGAAATCATGTCACACCAACCCATAGCC...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAAACTGTACAGAATTTTaGGAGAGGCCATTTGGCAAG +
Preference number: 2 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITNCTEF*ERPFGK
Trigger: CTTGCCAAATGGCCTCTCCCAAAATTCTGTACAGTT...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAAACTGTACAGAATTTTaGGAGAGGCCATTTGGCAAG +
Preference number: 2 (lower is better)
Translates to: EHVPQFCTVLYKGITETINCTEF*ERPFGK
Trigger: CTTGCCAAATGGCCTCTCCCAAAATTCTGTACAGTT...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR TCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATATGGGTTGGTGTGACATaGTTTCGCATTAATTGTTTG +
Preference number: 2 (lower is better)
Translates to: EHVPQFCTVLYKGITETIWVGVT*FRINCL
Trigger: CAAACAATTAATGCGAAATCATGTCACACCAACCCA...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR GCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCACACAGAAACATCTCTaGTTTTACCAGCAGAAGAGA +
Preference number: 2 (lower is better)
Translates to: AVVIHNISCNSGSYATHITQKHL*FYQQKR
Trigger: TCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR GCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAACACAGAAACATCTCTaGTTTTACCAGCAGAAGAGA +
Preference number: 2 (lower is better)
Translates to: EHVPQFCTVLYKGITETITQKHL*FYQQKR
Trigger: TCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGTGACTTTACCTACTTaGAACTATATGTCCTTACCT +
Preference number: 2 (lower is better)
Translates to: AVVIHNISCNSGSYATHIVTLPT*NYMSLP
Trigger: AGGTAAGGACATATAGTTCCAAGTAGGTAAAGTCAC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR GCA 72 bp AATTTGGAGGGGGAAATCCTAAGGTGGTGGAGTTGCTaGGTGGACACGGCTATGGGTTGGTGTGACATGATT +
Preference number: 3 (lower is better)
Translates to: NLEGEILRWWSC*VDTAMGWCDMI
Trigger: AATCATGTCACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCCCTCCAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR GCA 72 bp AATAATTTGGAGGGGGAAATCCTAAGGTGGTGGAGTTaGTGCGTGGACACGGCTATGGGTTGGTGTGACATG +
Preference number: 3 (lower is better)
Translates to: NNLEGEILRWWS*CVDTAMGWCDM
Trigger: CATGTCACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCCCTCCAAATTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CAA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGCCTAAGGTGGTGGAGTaGCTGCGTGGACACGGCTAT +
Preference number: 3 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEPKVVE*LRGHGY
Trigger: ATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGG...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR TCA 72 bp GTTGCTGCGTGGACACGGCTATGGGTTGGTGTGACATaGTTTCGCATTAATTGTTTGTCAGCTGTCAGTAGG +
Preference number: 3 (lower is better)
Translates to: VAAWTRLWVGVT*FRINCLSAVSR
Trigger: CCTACTGACAGCTGACAAACAATTAATGCGAAATCATGTCACACCAACCCATAGCCGTGTCCACGCAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR TCA 72 bp GTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTaGCATGATTTCGCATTAATTGTTTGTCAGCTGTCA +
Preference number: 3 (lower is better)
Translates to: VELLRGHGYGLV*HDFALIVCQLS
Trigger: TGACAGCTGACAAACAATTAATGCGAAATCATGTCACACCAACCCATAGCCGTGTCCACGCAGCAACTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CAA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGGTAGCACCGGGGAGCTaGGGCATGACACAGAAACAT +
Preference number: 3 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEVAPGS*GMTQKH
Trigger: ATGTTTCTGTGTCATGCCCAAGCTCCCCGGTGCTAC...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CAA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGTAGCACCGGGGAGCTaGGGCATGACACAGAAACAT +
Preference number: 3 (lower is better)
Translates to: AVVIHNISCNSGSYATHIVAPGS*GMTQKH
Trigger: ATGTTTCTGTGTCATGCCCAAGCTCCCCGGTGCTAC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR TCA 72 bp GATTTCGCATTAATTGTTTGTCAGCTGTCAGTAGGCTaGCCTAACGTTCTAGCATGCCTCTTGAGGGCCTTT +
Preference number: 3 (lower is better)
Translates to: DFALIVCQLSVG*PNVLACLLRAF
Trigger: AAAGGCCCTCAAGAGGCATGCTAGAACGTTAGGTCAGCCTACTGACAGCTGACAAACAATTAATGCGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR TCA 72 bp CTAATTAGACCTACACTTGAGGTTTCCCTGTTGGCGTaGCCTGAGCAAAACTGTACAGAATTTTGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: LIRPTLEVSLLA*PEQNCTEFWER
Trigger: CCTCTCCCAAAATTCTGTACAGTTTTGCTCAGGTCACGCCAACAGGGAAACCTCAAGTGTAGGTCTAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CAA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAGTTCTAGCATGCCTCTaGAGGGCCTTTCCAACTGAG +
Preference number: 3 (lower is better)
Translates to: EHVPQFCTVLYKGITETIVLACL*RAFPTE
Trigger: CTCAGTTGGAAAGGCCCTCAAGAGGCATGCTAGAAC...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CAA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGTTCTAGCATGCCTCTaGAGGGCCTTTCCAACTGAG +
Preference number: 3 (lower is better)
Translates to: AVVIHNISCNSGSYATHIVLACL*RAFPTE
Trigger: CTCAGTTGGAAAGGCCCTCAAGAGGCATGCTAGAAC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CAA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGTTTCGCATTAATTGTTaGTCAGCTGTCAGTAGGCTG +
Preference number: 3 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEFRINC*SAVSRL
Trigger: CAGCCTACTGACAGCTGACAAACAATTAATGCGAAA...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CAA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGAAACTGTACAGAATTTaGGGAGAGGCCATTTGGCAA +
Preference number: 3 (lower is better)
Translates to: SAVILDHMQPISVCYQSMKLYRI*GEAIWQ
Trigger: TTGCCAAATGGCCTCTCCCAAAATTCTGTACAGTTT...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CAA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGGGGTGTAAACACCAATaGTCTTTAAAGCAGATCCAG +
Preference number: 3 (lower is better)
Translates to: SAVILDHMQPISVCYQSMGCKHQ*SLKQIQ
Trigger: CTGGATCTGCTTTAAAGACAATTGGTGTTTACACCC...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
3UTR-3UTR CAA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGGGTGTAAACACCAATaGTCTTTAAAGCAGATCCAG +
Preference number: 3 (lower is better)
Translates to: AVVIHNISCNSGSYATHIGCKHQ*SLKQIQ
Trigger: CTGGATCTGCTTTAAAGACAATTGGTGTTTACACCC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGACGCCCACGGCGAGTaGACTCCCGGGGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCDAHGE*TPGARW
Trigger: CCACCTTGCCCCGGGAGTTCACTCGCCGTGGGCGTC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTCGACGGCCCGCAGCCTaGCCGGTGGCTTCTTCAACC +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCRRPAA*PVASST
Trigger: GGTTGAAGAAGCCACCGGTCAGGCTGCGGGCCGTCG...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCGACGCCCACGGCGAGTaGACTCCCGGGGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTDAHGE*TPGARW
Trigger: CCACCTTGCCCCGGGAGTTCACTCGCCGTGGGCGTC...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCCAGTATCCACGCCATaGCCCGCGCTGAGTGCCCGG +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTPVSTP*PALSAR
Trigger: CCGGGCACTCAGCGCGGGTCATGGCGTGGATACTGG...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276211.10
ENST00000370922.5
CDS-3UTR TCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCACGACGGCCCGCAGCCTaGCCGGTGGCTTCTTCAACC +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASRRPAA*PVASST
Trigger: GGTTGAAGAAGCCACCGGTCAGGCTGCGGGCCGTCG...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTCATGGGAACGGGCAGTaGCGGAAGGCACAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCHGNGQ*RKAQLA
Trigger: AGCCAGCTGTGCCTTCCGGCACTGCCCGTTCCCATG...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCATTCCGCCTGCGACTaGAAAAGCGCCGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTHSACD*KSAGCG
Trigger: GCCGCATCCGGCGCTTTTTCAGTCGCAGGCGGAATG...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGAAAGCTGCAGGGTCTaGAGCAGCAGGGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCESCRV*SSRAPS
Trigger: AGACGGAGCCCTGCTGCTGCAGACCCTGCAGCTTTC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTCCGCAGCCTGACCGGTaGCTTCTTCAACCTGCATCG +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCPQPDR*LLQPAS
Trigger: CGATGCAGGTTGAAGAAGCCACCGGTCAGGCTGCGG...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAACGCCATGACCCGCGCTaGGTGCCCGGCAGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSERHDPR*VPGSSQ
Trigger: CTGCGAGCTGCCGGGCACTCAGCGCGGGTCATGGCG...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276211.10
ENST00000370922.5
CDS-3UTR CCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAGTCGGGGTTGTGTCCTaGGGCTCCTCCCAAGACACT +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASVGVVS*GSSQDT
Trigger: AGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGAC...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCGCCGGAAGGCACAGCTaGCTCCTCAGAGGAACCTTC +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTAGRHS*LLRGTF
Trigger: GAAGGTTCCTCTGAGGAGCCAGCTGTGCCTTCCGGC...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTCCTTCCTCATCGTCATaGGAACGGGCAGTGCCGGAA +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCPSSSS*ERAVPE
Trigger: TTCCGGCACTGCCCGTTCCCATGACGATGAGGAAGG...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGGTCTTGCTCCGGAATaGGAGGGTTACCCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCGLAPE*EGYPLL
Trigger: AAGGAGCGGGTAACCCTCCCATTCCGGAGCAAGACC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGGTGGAGTTGCTGCGTaGACACGGCTATGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCGGVAA*TRLWVG
Trigger: ACCAACCCATAGCCGTGTCCACGCAGCAACTCCACC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTGACGCCCACGGCGAGTaGACTCCCGGGGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFDAHGE*TPGARW
Trigger: CCACCTTGCCCCGGGAGTTCACTCGCCGTGGGCGTC...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAACCAAGCATCCCCAGTaGAGGGGCTGGCAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASTKHPQ*RGWQCV
Trigger: AACACACTGCCAGCCCCTTCACTGGGGATGCTTGGT...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAAGGTGGTGGAGTTGCTaGGTGGACACGGCTATGGGT +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASRWWSC*VDTAMG
Trigger: ACCCATAGCCGTGTCCACGCAGCAACTCCACCACCT...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCAGGTGGTGGAGTTGCTaGGTGGACACGGCTATGGGT +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTRWWSC*VDTAMG
Trigger: ACCCATAGCCGTGTCCACGCAGCAACTCCACCACCT...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAGGTCTTGCTCCGGAATaGGAGGGTTACCCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASGLAPE*EGYPLL
Trigger: AAGGAGCGGGTAACCCTCCCATTCCGGAGCAAGACC...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCGGTGGAGTTGCTGCGTaGACACGGCTATGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTGGVAA*TRLWVG
Trigger: ACCAACCCATAGCCGTGTCCACGCAGCAACTCCACC...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGGGGAAATCCTAAGGTaGTGGAGTTGCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCGEILR*WSCCVD
Trigger: GTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAGACGCCCACGGCGAGTaGACTCCCGGGGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPDAHGE*TPGARW
Trigger: CCACCTTGCCCCGGGAGTTCACTCGCCGTGGGCGTC...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCACGGGGAGCTTGGGCATaGCACAGAAACATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASRGAWA*HRNISA
Trigger: AGCAGAGATGTTTCTGTGTCATGCCCAAGCTCCCCG...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGGGGAGCTTGGGCATaGCACAGAAACATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTRGAWA*HRNISA
Trigger: AGCAGAGATGTTTCTGTGTCATGCCCAAGCTCCCCG...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAATACCATCTTCGTCCTaGGGTCGGGGTTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASIPSSS*GRGCVL
Trigger: CAGGACACAACCCCGACCGCAGGACGAAGATGGTAT...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAAGCAATGGGCGGTCTTaGTCCGGAATGGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASSNGRS*SGMGGL
Trigger: TAACCCTCCCATTCCGGAGCAAGACCGCCCATTGCT...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAACTCCCGGGGCAAGGTaGGCTCATTCCGCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSTPGAR*AHSACD
Trigger: GTCGCAGGCGGAATGAGCCCACCTTGCCCCGGGAGT...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTATCACTGTGGCAGGGTaGCATCAGGTAGACCAGCAA +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCITVAG*HQVDQQ
Trigger: TTGCTGGTCTACCTGATGCCACCCTGCCACAGTGAT...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCGGGGAAATCCTAAGGTaGTGGAGTTGCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTGEILR*WSCCVD
Trigger: GTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCGCCAAATGTCTTGTGTaGTACAGCCCTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTAKCLV*YSPLLS
Trigger: GGACAGCAGAGGGCTGTATCACACAAGACATTTGGC...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACGACGGCCCGCAGCCTaGCCGGTGGCTTCTTCAACC +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPRRPAA*PVASST
Trigger: GGTTGAAGAAGCCACCGGTCAGGCTGCGGGCCGTCG...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTTGCAGGGCAGAAAGCTaGTCCTGGGGCTTTAAAGTT +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCCRAES*SWGFKV
Trigger: AACTTTAAAGCCCCAGGATCAGCTTTCTGCCCTGCA...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTCCTCGCAGTTCTCAGTaGTTTTATGCAGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCPRSSQ*FYAGPS
Trigger: TGAAGGCCCTGCATAAAATCACTGAGAACTGCGAGG...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTAAGGAAAGAAGTAGCTaGCGCCAGTTTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCKERSS*RQFWPP
Trigger: AGGAGGCCAAAACTGGCGTCAGCTACTTCTTTCCTT...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGTGGCTTCTTCAACCTaGATCGTGGCTGTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCVASST*IVAVSS
Trigger: TGAACTGACAGCCACGATGCAGGTTGAAGAAGCCAC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTTGGAAGTCATACGGTTaGCTGGGACCAACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCWKSYG*LGPTVH
Trigger: ATGGACAGTTGGTCCCAGGCAACCGTATGACTTCCA...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTACTCCCGGGGCAAGGTaGGCTCATTCCGCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFTPGAR*AHSACD
Trigger: GTCGCAGGCGGAATGAGCCCACCTTGCCCCGGGAGT...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAACTCCCGGGGCAAGGTaGGCTCATTCCGCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSETPGAR*AHSACD
Trigger: GTCGCAGGCGGAATGAGCCCACCTTGCCCCGGGAGT...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTATATGGGGAGGCACCTaGAAGAGGACATCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCIWGGT*KRTSQL
Trigger: TAACTGGGATGTCCTCTTCCAGGTGCCTCCCCATAT...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCGGCTGGCAGTGTGTTTaGAATTCTCATCCTGACCCG +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTGWQCV*NSHPDP
Trigger: CGGGTCAGGATGAGAATTCCAAACACACTGCCAGCC...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAGGCTGGCAGTGTGTTTaGAATTCTCATCCTGACCCG +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASGWQCV*NSHPDP
Trigger: CGGGTCAGGATGAGAATTCCAAACACACTGCCAGCC...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCGAAATCCTAAGGTGGTaGAGTTGCTGCGTGGACACG +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTEILRW*SCCVDT
Trigger: CGTGTCCACGCAGCAACTCCACCACCTTAGGATTTC...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATACGCCATGACCCGCGCTaGGTGCCCGGCAGCTCGCAG +
Preference number: 4 (lower is better)
Translates to: EHVPQFCTVLYKGITETIRHDPR*VPGSSQ
Trigger: CTGCGAGCTGCCGGGCACTCAGCGCGGGTCATGGCG...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276211.10
ENST00000370922.5
CDS-3UTR TCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGCGACGGCCCGCAGCCTaGCCGGTGGCTTCTTCAACC +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLERRPAA*PVASST
Trigger: GGTTGAAGAAGCCACCGGTCAGGCTGCGGGCCGTCG...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGCGACGGCCCGCAGCCTaGCCGGTGGCTTCTTCAACC +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMRRPAA*PVASST
Trigger: GGTTGAAGAAGCCACCGGTCAGGCTGCGGGCCGTCG...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCACGGAAAAACTCCTTaGGGAGTGCAGCCACATCAT +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTHGKTP*GVQPHH
Trigger: ATGATGTGGCTGCACTCCTCAAGGAGTTTTTCCGTG...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCACCTCGCAGTTCTCAGTaGTTTTATGCAGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASPRSSQ*FYAGPS
Trigger: TGAAGGCCCTGCATAAAATCACTGAGAACTGCGAGG...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAGCATCTCAAGATTTGTaGGGTTCCCTGGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASASQDL*GSLGKV
Trigger: CACCTTTCCCAGGGAACCTCACAAATCTTGAGATGC...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAGTTTCCCTGTTGGCGTaGCCTGAGCAAAACTGTACA +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASVSLLA*PEQNCT
Trigger: TGTACAGTTTTGCTCAGGTCACGCCAACAGGGAAAC...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAGTGGCTTCTTCAACCTaGATCGTGGCTGTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASVASST*IVAVSS
Trigger: TGAACTGACAGCCACGATGCAGGTTGAAGAAGCCAC...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTCCAACTGTCCATCAATaGCAATTGAGTCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCPTVHQ*QLSPRS
Trigger: ACTGCGAGGACTCAATTGGCATTGATGGACAGTTGG...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTCTTCATCAGAAGGCTTaGTTTGAGCAAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCLHQKA*FEQGQQ
Trigger: CTGCTGTCCTTGCTCAAAGCAAGCCTTCTGATGAAG...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTCATGGGAACGGGCAGTaGCGGAAGGCACAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFHGNGQ*RKAQLA
Trigger: AGCCAGCTGTGCCTTCCGGCACTGCCCGTTCCCATG...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTCATGGGAACGGGCAGTaGCGGAAGGCACAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFHGNGQ*RKAQLA
Trigger: AGCCAGCTGTGCCTTCCGGCACTGCCCGTTCCCATG...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCACCGCAGCCTGACCGGTaGCTTCTTCAACCTGCATCG +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSPQPDR*LLQPAS
Trigger: CGATGCAGGTTGAAGAAGCCACCGGTCAGGCTGCGG...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGACTCATCTTCCTTTTaGATCCCAGAAGTCGTTGGC +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCDSSSF*IPEVVG
Trigger: GCCAACGACTTCTGGGATCCAAAAGGAAGATGAGTC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTCAAGCCTCAACAACCTaGGGGATTTGTTTCGCAATC +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCQASTT*GICFAI
Trigger: GATTGCGAAACAAATCCCCCAGGTTGTTGAGGCTTG...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGGGCACACGGAGCAATaGGCGGTCTTGCTCCGGAAT +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSGHTEQ*AVLLRN
Trigger: ATTCCGGAGCAAGACCGCCCATTGCTCCGTGTGCCC...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAGACCCGAGCATCAGGTaGAACTCCTTCTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASDPSIR*NSFLPS
Trigger: TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTC...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTTTGGGAGAGGCCATTTaGCAAGCCATTGGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCLGEAI*QAIGLN
Trigger: ATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAA...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGCATTCCGCCTGCGACTaGAAAAGCGCCGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMHSACD*KSAGCG
Trigger: GCCGCATCCGGCGCTTTTTCAGTCGCAGGCGGAATG...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGTTTCGCAATCGGATTaGGACTCATCTTCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCVSQSD*DSSSFW
Trigger: CCAAAAGGAAGATGAGTCTCAATCCGATTGCGAAAC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCTCCATCAATGCCAATTaGGTCCTCGCAGTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTSINAN*VLAVLS
Trigger: ACTGAGAACTGCGAGGACTCAATTGGCATTGATGGA...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCTGGCACGGACCACATTaGCAGAAGCAACATAGTGAT +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTWHGPH*QKQHSD
Trigger: ATCACTATGTTGCTTCTGTCAATGTGGTCCGTGCCA...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCACCTGTTGGCGTGACCTaGGCAAAACTGTACAGAATT +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASPVGVT*AKLYRI
Trigger: AATTCTGTACAGTTTTGCTCAGGTCACGCCAACAGG...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAGAAAGCTGCAGGGTCTaGAGCAGCAGGGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEESCRV*SSRAPS
Trigger: AGACGGAGCCCTGCTGCTGCAGACCCTGCAGCTTTC...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCATTCTCAGTGATTTTATaGAGGGCCTTCAGCAGACGC +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASFSVIL*RAFSRR
Trigger: GCGTCTGCTGAAGGCCCTGCATAAAATCACTGAGAA...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCACCTCTTCCATCTTTATaGGTGCACTCTGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASPLPSL*VHSGSS
Trigger: GGAAGATCCAGAGTGCACGCATAAAGATGGAAGAGG...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCCTCTTCCATCTTTATaGGTGCACTCTGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTPLPSL*VHSGSS
Trigger: GGAAGATCCAGAGTGCACGCATAAAGATGGAAGAGG...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCTTCATCAGAAGGCTTaGTTTGAGCAAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTLHQKA*FEQGQQ
Trigger: CTGCTGTCCTTGCTCAAAGCAAGCCTTCTGATGAAG...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCAAGTCAGGGAAATCATaGAATCCCATCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTKSGKS*NPIWGR
Trigger: CCTTCCCCAGATGGGATTGCATGATTTCCCTGACTT...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAAAGTCAGGGAAATCATaGAATCCCATCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASKSGKS*NPIWGR
Trigger: CCTTCCCCAGATGGGATTGCATGATTTCCCTGACTT...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTGTCGGGGTTGTGTCCTaGGGCTCCTCCCAAGACACT +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFVGVVS*GSSQDT
Trigger: AGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGAC...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCACTTCAACCTGCATCGTaGCTGTCAGTTCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASLQPAS*LSVQDA
Trigger: AGCATCTTGAACTGACAGCCACGATGCAGGTTGAAG...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAACCGCAGCCTGACCGGTaGCTTCTTCAACCTGCATCG +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEPQPDR*LLQPAS
Trigger: CGATGCAGGTTGAAGAAGCCACCGGTCAGGCTGCGG...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCACAAGCCTCAACAACCTaGGGGATTTGTTTCGCAATC +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASQASTT*GICFAI
Trigger: GATTGCGAAACAAATCCCCCAGGTTGTTGAGGCTTG...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAAGTCATACGGTTGCCTaGGACCAACTGTCCATCAAT +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASSHTVA*DQLSIN
Trigger: ATTGATGGACAGTTGGTCCCAGGCAACCGTATGACT...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCAGTCATACGGTTGCCTaGGACCAACTGTCCATCAAT +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTSHTVA*DQLSIN
Trigger: ATTGATGGACAGTTGGTCCCAGGCAACCGTATGACT...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTGCCGGAAGGCACAGCTaGCTCCTCAGAGGAACCTTC +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFAGRHS*LLRGTF
Trigger: GAAGGTTCCTCTGAGGAGCCAGCTGTGCCTTCCGGC...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTGGGCACACGGAGCAATaGGCGGTCTTGCTCCGGAAT +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFGHTEQ*AVLLRN
Trigger: ATTCCGGAGCAAGACCGCCCATTGCTCCGTGTGCCC...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAGACACGGCTATGGGTTaGTGTGACATGATTTCGCAT +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASDTAMG*CDMISH
Trigger: ATGCGAAATCATGTCACACCAACCCATAGCCGTGTC...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCATTGGGAGAGGCCATTTaGCAAGCCATTGGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASLGEAI*QAIGLN
Trigger: ATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAA...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCATTGAGGTTTCCCTGTTaGCGTGACCTGAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASLRFPC*RDLSKT
Trigger: AGTTTTGCTCAGGTCACGCCAACAGGGAAACCTCAA...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGCATTCCGCCTGCGACTaGAAAAGCGCCGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMHSACD*KSAGCG
Trigger: GCCGCATCCGGCGCTTTTTCAGTCGCAGGCGGAATG...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGCATTCCGCCTGCGACTaGAAAAGCGCCGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEHSACD*KSAGCG
Trigger: GCCGCATCCGGCGCTTTTTCAGTCGCAGGCGGAATG...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCATGGAAAGGAAATTTTTaGAAGCTGCAGGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASWKGNF*KLQGLQ
Trigger: CTGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCA...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCACTACATCCAGACCTTaGTCAAATTCTTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTTTSRP*SNSSRS
Trigger: GCTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGT...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTGAGGGCCTTTCCAACTaGGCTCTCTGGAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFEGLSN*ALWRRV
Trigger: TACCCTCCTCCAGAGAGCTCAGTTGGAAAGGCCCTC...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAGAGGGCCTTTCCAACTaGGCTCTCTGGAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEEGLSN*ALWRRV
Trigger: TACCCTCCTCCAGAGAGCTCAGTTGGAAAGGCCCTC...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGGCTATGGGTTGGTGTaGCATGATTTCGCATTAATT +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCGYGLV*HDFALI
Trigger: AATTAATGCGAAATCATGTCACACCAACCCATAGCC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCAAACTCCTTGAGGAGTaGAGCCACATCATGCACATT +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTKLLEE*SHIMHI
Trigger: AATGTGCATGATGTGGCTGCACTCCTCAAGGAGTTT...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCTCTGATAAAATCAAGTaGTTCCGGGCTGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTSDKIK*FRAGLP
Trigger: TGGAAGTCCAGCCCGGAAGCACTTGATTTTATCAGA...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAAGCAATGGGCGGTCTTaGTCCGGAATGGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSSNGRS*SGMGGL
Trigger: TAACCCTCCCATTCCGGAGCAAGACCGCCCATTGCT...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAGTCGGGGTTGTGTCCTaGGGCTCCTCCCAAGACACT +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPVGVVS*GSSQDT
Trigger: AGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGAC...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTCCTTCCTCATCGTCATaGGAACGGGCAGTGCCGGAA +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFPSSSS*ERAVPE
Trigger: TTCCGGCACTGCCCGTTCCCATGACGATGAGGAAGG...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAACCTTCCTCATCGTCATaGGAACGGGCAGTGCCGGAA +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEPSSSS*ERAVPE
Trigger: TTCCGGCACTGCCCGTTCCCATGACGATGAGGAAGG...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCACATCATGCACATTCTaGTTGTCATCCAGCACTACA +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTTSCTF*LSSSTT
Trigger: TGTAGTGCTGGATGACAATCAGAATGTGCATGATGT...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTTTAGCAACCTGCCTCTaGATATGGGGAGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFLATCL*IWGGTW
Trigger: CCAGGTGCCTCCCCATATTCAGAGGCAGGTTGCTAA...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAACCAAGCATCCCCAGTaGAGGGGCTGGCAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPTKHPQ*RGWQCV
Trigger: AACACACTGCCAGCCCCTTCACTGGGGATGCTTGGT...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAACGGGGAGCTTGGGCATaGCACAGAAACATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSERGAWA*HRNISA
Trigger: AGCAGAGATGTTTCTGTGTCATGCCCAAGCTCCCCG...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCACAATCACAAATCTTTaGGCTCAGCAGTTGTTACCC +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTTITNL*AQQLLP
Trigger: GGGTAACAACTGCTGAGCTCAAAGATTTGTGATTGT...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAACAATCACAAATCTTTaGGCTCAGCAGTTGTTACCC +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASTITNL*AQQLLP
Trigger: GGGTAACAACTGCTGAGCTCAAAGATTTGTGATTGT...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTATACCATCTTCGTCCTaGGGTCGGGGTTGTGTCCTG +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFIPSSS*GRGCVL
Trigger: CAGGACACAACCCCGACCGCAGGACGAAGATGGTAT...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGGAAAGCTGCAGGGTCTaGAGCAGCAGGGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEESCRV*SSRAPS
Trigger: AGACGGAGCCCTGCTGCTGCAGACCCTGCAGCTTTC...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAAGCAATGGGCGGTCTTaGTCCGGAATGGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSESNGRS*SGMGGL
Trigger: TAACCCTCCCATTCCGGAGCAAGACCGCCCATTGCT...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAAGGTGGTGGAGTTGCTaGGTGGACACGGCTATGGGT +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPRWWSC*VDTAMG
Trigger: ACCCATAGCCGTGTCCACGCAGCAACTCCACCACCT...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGGTCGGGGTTGTGTCCTaGGGCTCCTCCCAAGACACT +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEVGVVS*GSSQDT
Trigger: AGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGAC...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCACGGAGAGGAAATGTCTaGCCACGAGTTCGTGGTAAG +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSRRGNV*PRVRGK
Trigger: CTTACCACGAACTCGTGGCCAGACATTTCCTCTCCG...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGCCGCAGCCTGACCGGTaGCTTCTTCAACCTGCATCG +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMPQPDR*LLQPAS
Trigger: CGATGCAGGTTGAAGAAGCCACCGGTCAGGCTGCGG...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCACTCCCGGGGCAAGGTaGGCTCATTCCGCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHITPGAR*AHSACD
Trigger: GTCGCAGGCGGAATGAGCCCACCTTGCCCCGGGAGT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAACTCCCGGGGCAAGGTaGGCTCATTCCGCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: EHVPQFCTVLYKGITETITPGAR*AHSACD
Trigger: GTCGCAGGCGGAATGAGCCCACCTTGCCCCGGGAGT...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCGATCCCAGAAGTCGTTaGCCAATTGGAAAGGAAATT +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTDPRSR*PIGKEI
Trigger: AATTTCCTTTCCAATTGGCCAACGACTTCTGGGATC...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGGCCGGAAGGCACAGCTaGCTCCTCAGAGGAACCTTC +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMAGRHS*LLRGTF
Trigger: GAAGGTTCCTCTGAGGAGCCAGCTGTGCCTTCCGGC...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAGGTCTTGCTCCGGAATaGGAGGGTTACCCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPGLAPE*EGYPLL
Trigger: AAGGAGCGGGTAACCCTCCCATTCCGGAGCAAGACC...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGGGGCACACGGAGCAATaGGCGGTCTTGCTCCGGAAT +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEGHTEQ*AVLLRN
Trigger: ATTCCGGAGCAAGACCGCCCATTGCTCCGTGTGCCC...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAATTTGTGAGGTTCCCTaGGAAAGGTGTTTACCACAA +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASICEVP*ERCLPQ
Trigger: TTGTGGTAAACACCTTTCCCAGGGAACCTCACAAAT...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGAAATCCTAAGGTGGTaGAGTTGCTGCGTGGACACG +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSEILRW*SCCVDT
Trigger: CGTGTCCACGCAGCAACTCCACCACCTTAGGATTTC...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTGGGGAAATCCTAAGGTaGTGGAGTTGCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFGEILR*WSCCVD
Trigger: GTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCAACTGTACAGAATTTTaGGAGAGGCCATTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTNCTEF*ERPFGK
Trigger: CTTGCCAAATGGCCTCTCCCAAAATTCTGTACAGTT...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCCATTCCGCCTGCGACTaGAAAAGCGCCGGATGCGGC +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIHSACD*KSAGCG
Trigger: GCCGCATCCGGCGCTTTTTCAGTCGCAGGCGGAATG...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCATTAGCAACCTGCCTCTaGATATGGGGAGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPLATCL*IWGGTW
Trigger: CCAGGTGCCTCCCCATATTCAGAGGCAGGTTGCTAA...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAAAGGAAAGAAGTAGCTaGCGCCAGTTTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSKERSS*RQFWPP
Trigger: AGGAGGCCAAAACTGGCGTCAGCTACTTCTTTCCTT...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGCGGGGAGCTTGGGCATaGCACAGAAACATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMRGAWA*HRNISA
Trigger: AGCAGAGATGTTTCTGTGTCATGCCCAAGCTCCCCG...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGGAGGGCCTTTCCAACTaGGCTCTCTGGAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEEGLSN*ALWRRV
Trigger: TACCCTCCTCCAGAGAGCTCAGTTGGAAAGGCCCTC...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTCAGCTGTCAGTAGGCTaGCCTAACGTTCTAGCATGC +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFQLSVG*PNVLAC
Trigger: GCATGCTAGAACGTTAGGTCAGCCTACTGACAGCTG...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAACAGCTGTCAGTAGGCTaGCCTAACGTTCTAGCATGC +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEQLSVG*PNVLAC
Trigger: GCATGCTAGAACGTTAGGTCAGCCTACTGACAGCTG...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCTGGGTTGGTGTGACATaGTTTCGCATTAATTGTTTG +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTWVGVT*FRINCL
Trigger: CAAACAATTAATGCGAAATCATGTCACACCAACCCA...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGTGGCTTCTTCAACCTaGATCGTGGCTGTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSVASST*IVAVSS
Trigger: TGAACTGACAGCCACGATGCAGGTTGAAGAAGCCAC...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCATGGAAGTCATACGGTTaGCTGGGACCAACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSWKSYG*LGPTVH
Trigger: ATGGACAGTTGGTCCCAGGCAACCGTATGACTTCCA...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCCATGGGAACGGGCAGTaGCGGAAGGCACAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIHGNGQ*RKAQLA
Trigger: AGCCAGCTGTGCCTTCCGGCACTGCCCGTTCCCATG...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACTAAGGTGGTGGAGTTaGTGCGTGGACACGGCTATG +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPLRWWS*CVDTAM
Trigger: CATAGCCGTGTCCACGCAGCAACTCCACCACCTTAG...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGCTAAGGTGGTGGAGTTaGTGCGTGGACACGGCTATG +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMLRWWS*CVDTAM
Trigger: CATAGCCGTGTCCACGCAGCAACTCCACCACCTTAG...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAATCACTGTGGCAGGGTaGCATCAGGTAGACCAGCAA +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEITVAG*HQVDQQ
Trigger: TTGCTGGTCTACCTGATGCCACCCTGCCACAGTGAT...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAATATGGGGAGGCACCTaGAAGAGGACATCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSIWGGT*KRTSQL
Trigger: TAACTGGGATGTCCTCTTCCAGGTGCCTCCCCATAT...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGCCTTCCTCATCGTCATaGGAACGGGCAGTGCCGGAA +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMPSSSS*ERAVPE
Trigger: TTCCGGCACTGCCCGTTCCCATGACGATGAGGAAGG...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGGGTCTTGCTCCGGAATaGGAGGGTTACCCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEGLAPE*EGYPLL
Trigger: AAGGAGCGGGTAACCCTCCCATTCCGGAGCAAGACC...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAGGGGAAATCCTAAGGTaGTGGAGTTGCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPGEILR*WSCCVD
Trigger: GTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGTGACTTTACCTACTTaGAACTATATGTCCTTACCT +
Preference number: 4 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCVTLPT*NYMSLP
Trigger: AGGTAAGGACATATAGTTCCAAGTAGGTAAAGTCAC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCACAGCAAAGGGGGCATaGTTCTGGGGCACAGTGCCC +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHITAKGA*FWGTVP
Trigger: GGGCACTGTGCCCCAGAATCATGCCCCCTTTGCTGT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR TCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAGCCAAATGTCTTGTGTaGTACAGCCCTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPAKCLV*YSPLLS
Trigger: GGACAGCAGAGGGCTGTATCACACAAGACATTTGGC...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCATGCTGTCAGGAGGAATaGCATGTACAGATCATCTGG +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSCCQEE*HVQIIW
Trigger: CCAGATGATCTGTACATGTCATTCCTCCTGACAGCA...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTTGCAGGGCAGAAAGCTaGTCCTGGGGCTTTAAAGTT +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFCRAES*SWGFKV
Trigger: AACTTTAAAGCCCCAGGATCAGCTTTCTGCCCTGCA...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAACCTCGCAGTTCTCAGTaGTTTTATGCAGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEPRSSQ*FYAGPS
Trigger: TGAAGGCCCTGCATAAAATCACTGAGAACTGCGAGG...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGTTAGCAACCTGCCTCTaGATATGGGGAGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLELATCL*IWGGTW
Trigger: CCAGGTGCCTCCCCATATTCAGAGGCAGGTTGCTAA...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTAAGGAAAGAAGTAGCTaGCGCCAGTTTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFKERSS*RQFWPP
Trigger: AGGAGGCCAAAACTGGCGTCAGCTACTTCTTTCCTT...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAAAGGAAAGAAGTAGCTaGCGCCAGTTTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEKERSS*RQFWPP
Trigger: AGGAGGCCAAAACTGGCGTCAGCTACTTCTTTCCTT...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCACCTGTTGGCGTGACCTaGGCAAAACTGTACAGAATT +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSPVGVT*AKLYRI
Trigger: AATTCTGTACAGTTTTGCTCAGGTCACGCCAACAGG...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTGTTTCCCTGTTGGCGTaGCCTGAGCAAAACTGTACA +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFVSLLA*PEQNCT
Trigger: TGTACAGTTTTGCTCAGGTCACGCCAACAGGGAAAC...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGGCCAAATGTCTTGTGTaGTACAGCTGGGGAGCCACG +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMAKCLV*YSWGAT
Trigger: CGTGGCTCCCCAGCTGTATCACACAAGACATTTGGC...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370921.1
CDS-3UTR GCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTGCACAGTGCCCTTGCTaGCTTCAGAAAAGGAATGCA +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFAQCPC*LQKRNA
Trigger: TGCATTCCTTTTCTGAAGGCAGCAAGGGCACTGTGC...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR GCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGAAAGCTGCAGGGTCTaGAGCAGCAGGGCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIESCRV*SSRAPS
Trigger: AGACGGAGCCCTGCTGCTGCAGACCCTGCAGCTTTC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGAAATTTTTGAAAGCTaGAGGGTCTGCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSEIFES*RVCSSR
Trigger: CCTGCTGCTGCAGACCCTGCAGCTTTCAAAAATTTC...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCATTCTCAGTGATTTTATaGAGGGCCTTCAGCAGACGC +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSFSVIL*RAFSRR
Trigger: GCGTCTGCTGAAGGCCCTGCATAAAATCACTGAGAA...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCACTTCATCAGAAGGCTTaGTTTGAGCAAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSLHQKA*FEQGQQ
Trigger: CTGCTGTCCTTGCTCAAAGCAAGCCTTCTGATGAAG...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAACATGGGAACGGGCAGTaGCGGAAGGCACAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREHGNGQ*RKAQLA
Trigger: AGCCAGCTGTGCCTTCCGGCACTGCCCGTTCCCATG...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGAGCAATGGGCGGTCTTaGTCCGGAATGGGAGGGTTA +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMSNGRS*SGMGGL
Trigger: TAACCCTCCCATTCCGGAGCAAGACCGCCCATTGCT...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAACCTAACGTTCTAGCATaGCTCTTGAGGGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEPNVLA*LLRAFP
Trigger: TGGAAAGGCCCTCAAGAGGCATGCTAGAACGTTAGG...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTCCTAACGTTCTAGCATaGCTCTTGAGGGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFPNVLA*LLRAFP
Trigger: TGGAAAGGCCCTCAAGAGGCATGCTAGAACGTTAGG...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCAGGGGGAGGGAAAACTaGGAGGCGGCTTCACCCTCA +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIRGREN*EAASPS
Trigger: TGAGGGTGAAGCCGCCTCCCAGTTTTCCCTCCCCCT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR CCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAATCACTGTGGCAGGGTaGCATCAGGTAGACCAGCAA +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPITVAG*HQVDQQ
Trigger: TTGCTGGTCTACCTGATGCCACCCTGCCACAGTGAT...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAAGTCATACGGTTGCCTaGGACCAACTGTCCATCAAT +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSSHTVA*DQLSIN
Trigger: ATTGATGGACAGTTGGTCCCAGGCAACCGTATGACT...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGCCGGAAGGCACAGCTaGCTCCTCAGAGGAACCTTC +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITAGRHS*LLRGTF
Trigger: GAAGGTTCCTCTGAGGAGCCAGCTGTGCCTTCCGGC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGGGCACACGGAGCAATaGGCGGTCTTGCTCCGGAAT +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITGHTEQ*AVLLRN
Trigger: ATTCCGGAGCAAGACCGCCCATTGCTCCGTGTGCCC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGGGCACACGGAGCAATaGGCGGTCTTGCTCCGGAAT +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIGHTEQ*AVLLRN
Trigger: ATTCCGGAGCAAGACCGCCCATTGCTCCGTGTGCCC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGACACGGCTATGGGTTaGTGTGACATGATTTCGCAT +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSDTAMG*CDMISH
Trigger: ATGCGAAATCATGTCACACCAACCCATAGCCGTGTC...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCATTGGGAGAGGCCATTTaGCAAGCCATTGGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSLGEAI*QAIGLN
Trigger: ATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAA...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCATTGAGGTTTCCCTGTTaGCGTGACCTGAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSLRFPC*RDLSKT
Trigger: AGTTTTGCTCAGGTCACGCCAACAGGGAAACCTCAA...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAGTGACTTTACCTACTTaGAACTATATGTCCTTACCT +
Preference number: 4 (lower is better)
Translates to: PSEGAGSVFGILILTRASVTLPT*NYMSLP
Trigger: AGGTAAGGACATATAGTTCCAAGTAGGTAAAGTCAC...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCACAGTCTTCATTTTATaGACCTTAGCAGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: PSIPSEGAGSVFGILILTTVFIL*TLAVVI
Trigger: GATGACAACTGCTAAGGTCCATAAAATGAAGACTGT...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCATGGAAAGGAAATTTTTaGAAGCTGCAGGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSWKGNF*KLQGLQ
Trigger: CTGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCA...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGCACGGAAAAACTCCTTaGGGAGTGCAGCCACATCAT +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMHGKTP*GVQPHH
Trigger: ATGATGTGGCTGCACTCCTCAAGGAGTTTTTCCGTG...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAATGCTGTCAGGAGGAATaGCATGTACAGATCATCTGG +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSECCQEE*HVQIIW
Trigger: CCAGATGATCTGTACATGTCATTCCTCCTGACAGCA...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAATCCATCAATGCCAATTaGGTCCTCGCAGTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSESINAN*VLAVLS
Trigger: ACTGAGAACTGCGAGGACTCAATTGGCATTGATGGA...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTTCCATCAATGCCAATTaGGTCCTCGCAGTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFSINAN*VLAVLS
Trigger: ACTGAGAACTGCGAGGACTCAATTGGCATTGATGGA...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAATGGCACGGACCACATTaGCAGAAGCAACATAGTGAT +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEWHGPH*QKQHSD
Trigger: ATCACTATGTTGCTTCTGTCAATGTGGTCCGTGCCA...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAACCAAGCATCCCCAGTaGAGGGGCTGGCAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITTKHPQ*RGWQCV
Trigger: AACACACTGCCAGCCCCTTCACTGGGGATGCTTGGT...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGAGGGCCTTTCCAACTaGGCTCTCTGGAGGAGGGTA +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIEGLSN*ALWRRV
Trigger: TACCCTCCTCCAGAGAGCTCAGTTGGAAAGGCCCTC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGCAGCTGTCAGTAGGCTaGCCTAACGTTCTAGCATGC +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMQLSVG*PNVLAC
Trigger: GCATGCTAGAACGTTAGGTCAGCCTACTGACAGCTG...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAACCTGTTGGCGTGACCTaGGCAAAACTGTACAGAATT +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEPVGVT*AKLYRI
Trigger: AATTCTGTACAGTTTTGCTCAGGTCACGCCAACAGG...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTTTCTCAGTGATTTTATaGAGGGCCTTCAGCAGACGC +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFFSVIL*RAFSRR
Trigger: GCGTCTGCTGAAGGCCCTGCATAAAATCACTGAGAA...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAACCAACTGTCCATCAATaGCAATTGAGTCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEPTVHQ*QLSPRS
Trigger: ACTGCGAGGACTCAATTGGCATTGATGGACAGTTGG...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCATGGAAGTCATACGGTTaGCTGGGACCAACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPWKSYG*LGPTVH
Trigger: ATGGACAGTTGGTCCCAGGCAACCGTATGACTTCCA...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTCCTCTTCCATCTTTATaGGTGCACTCTGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFPLPSL*VHSGSS
Trigger: GGAAGATCCAGAGTGCACGCATAAAGATGGAAGAGG...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAACCTCTTCCATCTTTATaGGTGCACTCTGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEPLPSL*VHSGSS
Trigger: GGAAGATCCAGAGTGCACGCATAAAGATGGAAGAGG...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTAAGTCAGGGAAATCATaGAATCCCATCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFKSGKS*NPIWGR
Trigger: CCTTCCCCAGATGGGATTGCATGATTTCCCTGACTT...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAAATTGTCACTGGACCTaGTGGAGAGAACTATGGGGG +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPNCHWT*WRELWG
Trigger: CCCCCATAGTTCTCTCCACCAGGTCCAGTGACAATT...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR CCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAGACTCATCTTCCTTTTaGATCCCAGAAGTCGTTGGC +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEDSSSF*IPEVVG
Trigger: GCCAACGACTTCTGGGATCCAAAAGGAAGATGAGTC...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAACAAGCCTCAACAACCTaGGGGATTTGTTTCGCAATC +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEQASTT*GICFAI
Trigger: GATTGCGAAACAAATCCCCCAGGTTGTTGAGGCTTG...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGATCACTGTGGCAGGGTaGCATCAGGTAGACCAGCAA +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMITVAG*HQVDQQ
Trigger: TTGCTGGTCTACCTGATGCCACCCTGCCACAGTGAT...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGATATGGGGAGGCACCTaGAAGAGGACATCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMIWGGT*KRTSQL
Trigger: TAACTGGGATGTCCTCTTCCAGGTGCCTCCCCATAT...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACACCTTCCTCATCGTCATaGGAACGGGCAGTGCCGGAA +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITPSSSS*ERAVPE
Trigger: TTCCGGCACTGCCCGTTCCCATGACGATGAGGAAGG...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAGACCCGAGCATCAGGTaGAACTCCTTCTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPDPSIR*NSFLPS
Trigger: TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTC...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGGGCTGGCAGTGTGTTTaGAATTCTCATCCTGACCCG +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEGWQCV*NSHPDP
Trigger: CGGGTCAGGATGAGAATTCCAAACACACTGCCAGCC...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAATCATGCAATCCCATCTaGGGAAGGGAAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSESCNPI*GRESIS
Trigger: TGAGATGCTTTCCCTTCCCCAGATGGGATTGCATGA...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTTCATGCAATCCCATCTaGGGAAGGGAAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFSCNPI*GRESIS
Trigger: TGAGATGCTTTCCCTTCCCCAGATGGGATTGCATGA...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGGTGGAGTTGCTGCGTaGACACGGCTATGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIGGVAA*TRLWVG
Trigger: ACCAACCCATAGCCGTGTCCACGCAGCAACTCCACC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGGAAATCCTAAGGTGGTaGAGTTGCTGCGTGGACACG +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEEILRW*SCCVDT
Trigger: CGTGTCCACGCAGCAACTCCACCACCTTAGGATTTC...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAGAGCTCTGTCAGGTTTaGATTCGGAGAGGAAATGTC +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPELCQV*IRRGNV
Trigger: GACATTTCCTCTCCGAATTCAAACCTGACAGAGCTC...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTGTTTCGCAATCGGATTaGGACTCATCTTCCTTTTGG +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFVSQSD*DSSSFW
Trigger: CCAAAAGGAAGATGAGTCTCAATCCGATTGCGAAAC...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAAGCCATGTTTTTCAATaGATTGGCAGCAAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSSHVFQ*IGSKPQ
Trigger: TTGAGGCTTGCTGCCAATTCATTGAAAAACATGGCT...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTACTACATCCAGACCTTaGTCAAATTCTTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFTTSRP*SNSSRS
Trigger: GCTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGT...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGCACGGAAAAACTCCTTaGGGAGTGCAGCCACATCAT +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMHGKTP*GVQPHH
Trigger: ATGATGTGGCTGCACTCCTCAAGGAGTTTTTCCGTG...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGTGCAGGGCAGAAAGCTaGTCCTGGGGCTTTAAAGTT +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLECRAES*SWGFKV
Trigger: AACTTTAAAGCCCCAGGATCAGCTTTCTGCCCTGCA...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCATCCATCAATGCCAATTaGGTCCTCGCAGTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPSINAN*VLAVLS
Trigger: ACTGAGAACTGCGAGGACTCAATTGGCATTGATGGA...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCATGGCACGGACCACATTaGCAGAAGCAACATAGTGAT +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPWHGPH*QKQHSD
Trigger: ATCACTATGTTGCTTCTGTCAATGTGGTCCGTGCCA...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAACCAAGCATCCCCAGTaGAGGGGCTGGCAGTGTGTT +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQRERETKHPQ*RGWQCV
Trigger: AACACACTGCCAGCCCCTTCACTGGGGATGCTTGGT...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACACGGGGAGCTTGGGCATaGCACAGAAACATCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITRGAWA*HRNISA
Trigger: AGCAGAGATGTTTCTGTGTCATGCCCAAGCTCCCCG...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGGTTTCCCTGTTGGCGTaGCCTGAGCAAAACTGTACA +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMVSLLA*PEQNCT
Trigger: TGTACAGTTTTGCTCAGGTCACGCCAACAGGGAAAC...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAACAATCACAAATCTTTaGGCTCAGCAGTTGTTACCC +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSTITNL*AQQLLP
Trigger: GGGTAACAACTGCTGAGCTCAAAGATTTGTGATTGT...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTCCTTCAGAAAAGGAATaGAGCCACCCATTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFPSEKE*SHPFWN
Trigger: ATTCCAGAATGGGTGGCTGCATTCCTTTTCTGAAGG...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR GCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAGAAATTTTTGAAAGCTaGAGGGTCTGCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPEIFES*RVCSSR
Trigger: CCTGCTGCTGCAGACCCTGCAGCTTTCAAAAATTTC...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTAAACTCCTTGAGGAGTaGAGCCACATCATGCACATT +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFKLLEE*SHIMHI
Trigger: AATGTGCATGATGTGGCTGCACTCCTCAAGGAGTTT...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCAACTGTCCATCAATaGCAATTGAGTCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPPTVHQ*QLSPRS
Trigger: ACTGCGAGGACTCAATTGGCATTGATGGACAGTTGG...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTTCTGATAAAATCAAGTaGTTCCGGGCTGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFSDKIK*FRAGLP
Trigger: TGGAAGTCCAGCCCGGAAGCACTTGATTTTATCAGA...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTTCTGATAAAATCAAGTaGTTCCGGGCTGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFSDKIK*FRAGLP
Trigger: TGGAAGTCCAGCCCGGAAGCACTTGATTTTATCAGA...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAATCTGATAAAATCAAGTaGTTCCGGGCTGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSESDKIK*FRAGLP
Trigger: TGGAAGTCCAGCCCGGAAGCACTTGATTTTATCAGA...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCATTCCATCTTTATGCGTaGACTCTGGATCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSFHLYA*TLDLPQ
Trigger: TTGAGGAAGATCCAGAGTGCACGCATAAAGATGGAA...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGCCTAACGTTCTAGCATaGCTCTTGAGGGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMPNVLA*LLRAFP
Trigger: TGGAAAGGCCCTCAAGAGGCATGCTAGAACGTTAGG...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAAGGTGGTGGAGTTGCTaGGTGGACACGGCTATGGGT +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQRERERWWSC*VDTAMG
Trigger: ACCCATAGCCGTGTCCACGCAGCAACTCCACCACCT...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACACTAAGGTGGTGGAGTTaGTGCGTGGACACGGCTATG +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITLRWWS*CVDTAM
Trigger: CATAGCCGTGTCCACGCAGCAACTCCACCACCTTAG...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCAAGCAGAGCAGCCTCTaGTTGTTTTTGCACGGCGGG +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIKQSSL*LFLHGG
Trigger: CCCGCCGTGCAAAAACAACCAGAGGCTGCTCTGCTT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTCACTGGACCTGGTaGAGAGAACTATGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHICHWTW*RELWGW
Trigger: CCACCCCCATAGTTCTCTCCACCAGGTCCAGTGACA...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR CCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGCTTCAACCTGCATCGTaGCTGTCAGTTCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMLQPAS*LSVQDA
Trigger: AGCATCTTGAACTGACAGCCACGATGCAGGTTGAAG...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGCAAGCCTCAACAACCTaGGGGATTTGTTTCGCAATC +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMQASTT*GICFAI
Trigger: GATTGCGAAACAAATCCCCCAGGTTGTTGAGGCTTG...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAATTTATGCGTGCACTCTaGATCTTCCTCAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEFMRAL*IFLKFL
Trigger: CAGGAACTTGAGGAAGATCCAGAGTGCACGCATAAA...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTTTTATGCGTGCACTCTaGATCTTCCTCAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFFMRAL*IFLKFL
Trigger: CAGGAACTTGAGGAAGATCCAGAGTGCACGCATAAA...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGGTCTTGCTCCGGAATaGGAGGGTTACCCGCTCCTT +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREGLAPE*EGYPLL
Trigger: AAGGAGCGGGTAACCCTCCCATTCCGGAGCAAGACC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGGACCCGAGCATCAGGTaGAACTCCTTCTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMDPSIR*NSFLPS
Trigger: TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTC...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGGACACGGCTATGGGTTaGTGTGACATGATTTCGCAT +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMDTAMG*CDMISH
Trigger: ATGCGAAATCATGTCACACCAACCCATAGCCGTGTC...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAGACACGGCTATGGGTTaGTGTGACATGATTTCGCAT +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPDTAMG*CDMISH
Trigger: ATGCGAAATCATGTCACACCAACCCATAGCCGTGTC...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGGGGAAATCCTAAGGTaGTGGAGTTGCTGCGTGGAC +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIGEILR*WSCCVD
Trigger: GTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGCCAAATGTCTTGTGTaGTACAGCCCTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITAKCLV*YSPLLS
Trigger: GGACAGCAGAGGGCTGTATCACACAAGACATTTGGC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAACTACATCCAGACCTTaGTCAAATTCTTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPTTSRP*SNSSRS
Trigger: GCTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGT...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGACTACATCCAGACCTTaGTCAAATTCTTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMTTSRP*SNSSRS
Trigger: GCTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGT...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTACATCATGCACATTCTaGTTGTCATCCAGCACTACA +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFTSCTF*LSSSTT
Trigger: TGTAGTGCTGGATGACAATCAGAATGTGCATGATGT...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGTGCTGTCAGGAGGAATaGCATGTACAGATCATCTGG +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMCCQEE*HVQIIW
Trigger: CCAGATGATCTGTACATGTCATTCCTCCTGACAGCA...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGTCCATCAATGCCAATTaGGTCCTCGCAGTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMSINAN*VLAVLS
Trigger: ACTGAGAACTGCGAGGACTCAATTGGCATTGATGGA...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACACAGCTGTCAGTAGGCTaGCCTAACGTTCTAGCATGC +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITQLSVG*PNVLAC
Trigger: GCATGCTAGAACGTTAGGTCAGCCTACTGACAGCTG...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCATGGGTTGGTGTGACATaGTTTCGCATTAATTGTTTG +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSWVGVT*FRINCL
Trigger: CAAACAATTAATGCGAAATCATGTCACACCAACCCA...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTGGCTATGGGTTGGTGTaGCATGATTTCGCATTAATT +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFGYGLV*HDFALI
Trigger: AATTAATGCGAAATCATGTCACACCAACCCATAGCC...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTGGCTATGGGTTGGTGTaGCATGATTTCGCATTAATT +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFGYGLV*HDFALI
Trigger: AATTAATGCGAAATCATGTCACACCAACCCATAGCC...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGCCTGTTGGCGTGACCTaGGCAAAACTGTACAGAATT +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEPVGVT*AKLYRI
Trigger: AATTCTGTACAGTTTTGCTCAGGTCACGCCAACAGG...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATGATTATCAAGGCTaGATCATCCAATTGTCACTG +
Preference number: 4 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSDDYQG*IIQLSL
Trigger: CAGTGACAATTGGATGATGCAGCCTTGATAATCATC...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR GCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGCTTCATCAGAAGGCTTaGTTTGAGCAAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLELHQKA*FEQGQQ
Trigger: CTGCTGTCCTTGCTCAAAGCAAGCCTTCTGATGAAG...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGCTTCATCAGAAGGCTTaGTTTGAGCAAGGACAGCAG +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMLHQKA*FEQGQQ
Trigger: CTGCTGTCCTTGCTCAAAGCAAGCCTTCTGATGAAG...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAACTAAGGTGGTGGAGTTaGTGCGTGGACACGGCTATG +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQRERELRWWS*CVDTAM
Trigger: CATAGCCGTGTCCACGCAGCAACTCCACCACCTTAG...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAATCCCAAGACACTCATTaGTTTCAACCTTCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSESQDTH*FQPSQG
Trigger: ACCTTGAGAAGGTTGAAAGCAATGAGTGTCTTGGGA...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCCGGAGAGGAAATGTCTaGCCACGAGTTCGTGGTAAG +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIRRGNV*PRVRGK
Trigger: CTTACCACGAACTCGTGGCCAGACATTTCCTCTCCG...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGCTTCAACCTGCATCGTaGCTGTCAGTTCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMLQPAS*LSVQDA
Trigger: AGCATCTTGAACTGACAGCCACGATGCAGGTTGAAG...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTGATCCCAGAAGTCGTTaGCCAATTGGAAAGGAAATT +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFDPRSR*PIGKEI
Trigger: AATTTCCTTTCCAATTGGCCAACGACTTCTGGGATC...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTGATCCCAGAAGTCGTTaGCCAATTGGAAAGGAAATT +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFDPRSR*PIGKEI
Trigger: AATTTCCTTTCCAATTGGCCAACGACTTCTGGGATC...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCATCACTGTGGCAGGGTaGCATCAGGTAGACCAGCAA +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIITVAG*HQVDQQ
Trigger: TTGCTGGTCTACCTGATGCCACCCTGCCACAGTGAT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCATTTATGCGTGCACTCTaGATCTTCCTCAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPFMRAL*IFLKFL
Trigger: CAGGAACTTGAGGAAGATCCAGAGTGCACGCATAAA...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAAATCCTAAGGTGGTaGAGTTGCTGCGTGGACACG +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITEILRW*SCCVDT
Trigger: CGTGTCCACGCAGCAACTCCACCACCTTAGGATTTC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAAACTGTACAGAATTTTaGGAGAGGCCATTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSENCTEF*ERPFGK
Trigger: CTTGCCAAATGGCCTCTCCCAAAATTCTGTACAGTT...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGCCAAATGTCTTGTGTaGTACAGCCCTCTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREAKCLV*YSPLLS
Trigger: GGACAGCAGAGGGCTGTATCACACAAGACATTTGGC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGACATCATGCACATTCTaGTTGTCATCCAGCACTACA +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMTSCTF*LSSSTT
Trigger: TGTAGTGCTGGATGACAATCAGAATGTGCATGATGT...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAACATCATGCACATTCTaGTTGTCATCCAGCACTACA +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPTSCTF*LSSSTT
Trigger: TGTAGTGCTGGATGACAATCAGAATGTGCATGATGT...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACACACGGAAAAACTCCTTaGGGAGTGCAGCCACATCAT +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITHGKTP*GVQPHH
Trigger: ATGATGTGGCTGCACTCCTCAAGGAGTTTTTCCGTG...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATACCTCGCAGTTCTCAGTaGTTTTATGCAGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: EHVPQFCTVLYKGITETIPRSSQ*FYAGPS
Trigger: TGAAGGCCCTGCATAAAATCACTGAGAACTGCGAGG...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAAAGGAAAGAAGTAGCTaGCGCCAGTTTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITKERSS*RQFWPP
Trigger: AGGAGGCCAAAACTGGCGTCAGCTACTTCTTTCCTT...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGCATCTCAAGATTTGTaGGGTTCCCTGGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITASQDL*GSLGKV
Trigger: CACCTTTCCCAGGGAACCTCACAAATCTTGAGATGC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGTTTCCCTGTTGGCGTaGCCTGAGCAAAACTGTACA +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIVSLLA*PEQNCT
Trigger: TGTACAGTTTTGCTCAGGTCACGCCAACAGGGAAAC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGTGGCTTCTTCAACCTaGATCGTGGCTGTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITVASST*IVAVSS
Trigger: TGAACTGACAGCCACGATGCAGGTTGAAGAAGCCAC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCTGGAAGTCATACGGTTaGCTGGGACCAACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIWKSYG*LGPTVH
Trigger: ATGGACAGTTGGTCCCAGGCAACCGTATGACTTCCA...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGTTCCATCTTTATGCGTaGACTCTGGATCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMFHLYA*TLDLPQ
Trigger: TTGAGGAAGATCCAGAGTGCACGCATAAAGATGGAA...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTACACAGAAACATCTCTaGTTTTACCAGCAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFTQKHL*FYQQKR
Trigger: TCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCCCTAACGTTCTAGCATaGCTCTTGAGGGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIPNVLA*LLRAFP
Trigger: TGGAAAGGCCCTCAAGAGGCATGCTAGAACGTTAGG...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATACCTAACGTTCTAGCATaGCTCTTGAGGGCCTTTCCA +
Preference number: 4 (lower is better)
Translates to: EHVPQFCTVLYKGITETIPNVLA*LLRAFP
Trigger: TGGAAAGGCCCTCAAGAGGCATGCTAGAACGTTAGG...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGTCCCAAGACACTCATTaGTTTCAACCTTCTCAAGGT +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMSQDTH*FQPSQG
Trigger: ACCTTGAGAAGGTTGAAAGCAATGAGTGTCTTGGGA...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAACGGAGAGGAAATGTCTaGCCACGAGTTCGTGGTAAG +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQRERERRGNV*PRVRGK
Trigger: CTTACCACGAACTCGTGGCCAGACATTTCCTCTCCG...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTTGTTTTTCAATGAATTaGCAGCAAGCCTCAACAACC +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFCFSMN*QQASTT
Trigger: GGTTGTTGAGGCTTGCTGCCAATTCATTGAAAAACA...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCATATGGGGAGGCACCTaGAAGAGGACATCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIIWGGT*KRTSQL
Trigger: TAACTGGGATGTCCTCTTCCAGGTGCCTCCCCATAT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAGACCCGAGCATCAGGTaGAACTCCTTCTTACCTTCA +
Preference number: 4 (lower is better)
Translates to: EHVPQFCTVLYKGITETIDPSIR*NSFLPS
Trigger: TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTC...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAATTTGTGAGGTTCCCTaGGAAAGGTGTTTACCACAA +
Preference number: 4 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPICEVP*ERCLPQ
Trigger: TTGTGGTAAACACCTTTCCCAGGGAACCTCACAAAT...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGCTCTGTCAGGTTTaGATTCGGAGAGGAAATGTC +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITELCQV*IRRGNV
Trigger: GACATTTCCTCTCCGAATTCAAACCTGACAGAGCTC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGAGCCATGTTTTTCAATaGATTGGCAGCAAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMSHVFQ*IGSKPQ
Trigger: TTGAGGCTTGCTGCCAATTCATTGAAAAACATGGCT...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAATGCAGGGCAGAAAGCTaGTCCTGGGGCTTTAAAGTT +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQRERECRAES*SWGFKV
Trigger: AACTTTAAAGCCCCAGGATCAGCTTTCTGCCCTGCA...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAACCTCGCAGTTCTCAGTaGTTTTATGCAGGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREPRSSQ*FYAGPS
Trigger: TGAAGGCCCTGCATAAAATCACTGAGAACTGCGAGG...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGCATCTCAAGATTTGTaGGGTTCCCTGGGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREASQDL*GSLGKV
Trigger: CACCTTTCCCAGGGAACCTCACAAATCTTGAGATGC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGTGGGTTGGTGTGACATaGTTTCGCATTAATTGTTTG +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMWVGVT*FRINCL
Trigger: CAAACAATTAATGCGAAATCATGTCACACCAACCCA...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGTGGCTTCTTCAACCTaGATCGTGGCTGTCAGTTCA +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREVASST*IVAVSS
Trigger: TGAACTGACAGCCACGATGCAGGTTGAAGAAGCCAC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGAAATTTTTGAAAGCTaGAGGGTCTGCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIEIFES*RVCSSR
Trigger: CCTGCTGCTGCAGACCCTGCAGCTTTCAAAAATTTC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCTTCTCAGTGATTTTATaGAGGGCCTTCAGCAGACGC +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIFSVIL*RAFSRR
Trigger: GCGTCTGCTGAAGGCCCTGCATAAAATCACTGAGAA...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATATTCTCAGTGATTTTATaGAGGGCCTTCAGCAGACGC +
Preference number: 4 (lower is better)
Translates to: EHVPQFCTVLYKGITETIFSVIL*RAFSRR
Trigger: GCGTCTGCTGAAGGCCCTGCATAAAATCACTGAGAA...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATACCAACTGTCCATCAATaGCAATTGAGTCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: EHVPQFCTVLYKGITETIPTVHQ*QLSPRS
Trigger: ACTGCGAGGACTCAATTGGCATTGATGGACAGTTGG...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGTTCCATCTTTATGCGTaGACTCTGGATCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEFHLYA*TLDLPQ
Trigger: TTGAGGAAGATCCAGAGTGCACGCATAAAGATGGAA...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCCCTCTTCCATCTTTATaGGTGCACTCTGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIPLPSL*VHSGSS
Trigger: GGAAGATCCAGAGTGCACGCATAAAGATGGAAGAGG...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCAAGTCAGGGAAATCATaGAATCCCATCTGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIKSGKS*NPIWGR
Trigger: CCTTCCCCAGATGGGATTGCATGATTTCCCTGACTT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATACTTCAACCTGCATCGTaGCTGTCAGTTCAAGATGCT +
Preference number: 4 (lower is better)
Translates to: EHVPQFCTVLYKGITETILQPAS*LSVQDA
Trigger: AGCATCTTGAACTGACAGCCACGATGCAGGTTGAAG...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGACTCATCTTCCTTTTaGATCCCAGAAGTCGTTGGC +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIDSSSF*IPEVVG
Trigger: GCCAACGACTTCTGGGATCCAAAAGGAAGATGAGTC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGACTCATCTTCCTTTTaGATCCCAGAAGTCGTTGGC +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITDSSSF*IPEVVG
Trigger: GCCAACGACTTCTGGGATCCAAAAGGAAGATGAGTC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCCAAGCCTCAACAACCTaGGGGATTTGTTTCGCAATC +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIQASTT*GICFAI
Trigger: GATTGCGAAACAAATCCCCCAGGTTGTTGAGGCTTG...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAATATGGGGAGGCACCTaGAAGAGGACATCCCAGTTA +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREIWGGT*KRTSQL
Trigger: TAACTGGGATGTCCTCTTCCAGGTGCCTCCCCATAT...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATATCATGCAATCCCATCTaGGGAAGGGAAAGCATCTCA +
Preference number: 4 (lower is better)
Translates to: EHVPQFCTVLYKGITETISCNPI*GRESIS
Trigger: TGAGATGCTTTCCCTTCCCCAGATGGGATTGCATGA...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATATTGGGAGAGGCCATTTaGCAAGCCATTGGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: EHVPQFCTVLYKGITETILGEAI*QAIGLN
Trigger: ATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAA...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGAACTGTACAGAATTTTaGGAGAGGCCATTTGGCAAG +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLENCTEF*ERPFGK
Trigger: CTTGCCAAATGGCCTCTCCCAAAATTCTGTACAGTT...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTGTGACTTTACCTACTTaGAACTATATGTCCTTACCT +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFVTLPT*NYMSLP
Trigger: AGGTAAGGACATATAGTTCCAAGTAGGTAAAGTCAC...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTACAGTCTTCATTTTATaGACCTTAGCAGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFTVFIL*TLAVVI
Trigger: GATGACAACTGCTAAGGTCCATAAAATGAAGACTGT...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTACAGTCTTCATTTTATaGACCTTAGCAGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: ILILTRASGGTPSYLQIFTVFIL*TLAVVI
Trigger: GATGACAACTGCTAAGGTCCATAAAATGAAGACTGT...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGAGCTCTGTCAGGTTTaGATTCGGAGAGGAAATGTC +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREELCQV*IRRGNV
Trigger: GACATTTCCTCTCCGAATTCAAACCTGACAGAGCTC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACATGGAAAGGAAATTTTTaGAAGCTGCAGGGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITWKGNF*KLQGLQ
Trigger: CTGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCA...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCACTACATCCAGACCTTaGTCAAATTCTTCACGGAGC +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHITTSRP*SNSSRS
Trigger: GCTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAATGGCACGGACCACATTaGCAGAAGCAACATAGTGAT +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREWHGPH*QKQHSD
Trigger: ATCACTATGTTGCTTCTGTCAATGTGGTCCGTGCCA...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGAAATTTTTGAAAGCTaGAGGGTCTGCAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREEIFES*RVCSSR
Trigger: CCTGCTGCTGCAGACCCTGCAGCTTTCAAAAATTTC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAAAACTCCTTGAGGAGTaGAGCCACATCATGCACATT +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITKLLEE*SHIMHI
Trigger: AATGTGCATGATGTGGCTGCACTCCTCAAGGAGTTT...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGACACAGAAACATCTCTaGTTTTACCAGCAGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMTQKHL*FYQQKR
Trigger: TCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATATCATCCAATTGTCACTaGACCTGGTGGAGAGAACTA +
Preference number: 4 (lower is better)
Translates to: EHVPQFCTVLYKGITETISSNCH*TWWREL
Trigger: TAGTTCTCTCCACCAGGTCCAGTGACAATTGGATGA...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR CCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACATGCAGCCACCCATTCTaGAATCGGATGATTATCAAG +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITCSHPF*NRMIIK
Trigger: CTTGATAATCATCCGATTCCAGAATGGGTGGCTGCA...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR CCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGACTCATCTTCCTTTTaGATCCCAGAAGTCGTTGGC +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREDSSSF*IPEVVG
Trigger: GCCAACGACTTCTGGGATCCAAAAGGAAGATGAGTC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGTGTTTTTCAATGAATTaGCAGCAAGCCTCAACAACC +
Preference number: 4 (lower is better)
Translates to: SAVILDHMQPISVCYQSMCFSMN*QQASTT
Trigger: GGTTGTTGAGGCTTGCTGCCAATTCATTGAAAAACA...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGTGTTTTTCAATGAATTaGCAGCAAGCCTCAACAACC +
Preference number: 4 (lower is better)
Translates to: YRILGEAIWQAIGLNNLECFSMN*QQASTT
Trigger: GGTTGTTGAGGCTTGCTGCCAATTCATTGAAAAACA...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAAGTCATACGGTTGCCTaGGACCAACTGTCCATCAAT +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQRERESHTVA*DQLSIN
Trigger: ATTGATGGACAGTTGGTCCCAGGCAACCGTATGACT...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACATTTATGCGTGCACTCTaGATCTTCCTCAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITFMRAL*IFLKFL
Trigger: CAGGAACTTGAGGAAGATCCAGAGTGCACGCATAAA...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAATTGGGAGAGGCCATTTaGCAAGCCATTGGTCTGAAT +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQRERELGEAI*QAIGLN
Trigger: ATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAA...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAATTGAGGTTTCCCTGTTaGCGTGACCTGAGCAAAACT +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQRERELRFPC*RDLSKT
Trigger: AGTTTTGCTCAGGTCACGCCAACAGGGAAACCTCAA...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGGTGACTTTACCTACTTaGAACTATATGTCCTTACCT +
Preference number: 4 (lower is better)
Translates to: GKHLKICEVPWERCLPQMVTLPT*NYMSLP
Trigger: AGGTAAGGACATATAGTTCCAAGTAGGTAAAGTCAC...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCCATTCTGGAATCGGATaGTTATCAAGGCTGCATCAT +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIHSGIG*LSRLHH
Trigger: ATGATGCAGCCTTGATAATCATCCGATTCCAGAATG...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR TCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAAGCCATGTTTTTCAATaGATTGGCAGCAAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: EHVPQFCTVLYKGITETISHVFQ*IGSKPQ
Trigger: TTGAGGCTTGCTGCCAATTCATTGAAAAACATGGCT...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCAGCCATGTTTTTCAATaGATTGGCAGCAAGCCTCAA +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHISHVFQ*IGSKPQ
Trigger: TTGAGGCTTGCTGCCAATTCATTGAAAAACATGGCT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAACATCATGCACATTCTaGTTGTCATCCAGCACTACA +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITTSCTF*LSSSTT
Trigger: TGTAGTGCTGGATGACAATCAGAATGTGCATGATGT...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAACAATCACAAATCTTTaGGCTCAGCAGTTGTTACCC +
Preference number: 4 (lower is better)
Translates to: EHVPQFCTVLYKGITETITITNL*AQQLLP
Trigger: GGGTAACAACTGCTGAGCTCAAAGATTTGTGATTGT...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAAAACTCCTTGAGGAGTaGAGCCACATCATGCACATT +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREKLLEE*SHIMHI
Trigger: AATGTGCATGATGTGGCTGCACTCCTCAAGGAGTTT...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR GCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAATCTGATAAAATCAAGTaGTTCCGGGCTGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQRERESDKIK*FRAGLP
Trigger: TGGAAGTCCAGCCCGGAAGCACTTGATTTTATCAGA...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAACCCTTTTCCCCTGTCTaGCACCTTATAGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREPFSPV*HLIEGK
Trigger: TTTTCCTTCTATAAGGTGCCAGACAGGGGAAAAGGG...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR TCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCTGGGTTGGTGTGACATaGTTTCGCATTAATTGTTTG +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHIWVGVT*FRINCL
Trigger: CAAACAATTAATGCGAAATCATGTCACACCAACCCA...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGATCCCAGAAGTCGTTaGCCAATTGGAAAGGAAATT +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQREREDPRSR*PIGKEI
Trigger: AATTTCCTTTCCAATTGGCCAACGACTTCTGGGATC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAATGTTTTTCAATGAATTaGCAGCAAGCCTCAACAACC +
Preference number: 4 (lower is better)
Translates to: CLPQMSHQLKESLQRERECFSMN*QQASTT
Trigger: GGTTGTTGAGGCTTGCTGCCAATTCATTGAAAAACA...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGTGACTTTACCTACTTaGAACTATATGTCCTTACCT +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITVTLPT*NYMSLP
Trigger: AGGTAAGGACATATAGTTCCAAGTAGGTAAAGTCAC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAACAGTCTTCATTTTATaGACCTTAGCAGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITTVFIL*TLAVVI
Trigger: GATGACAACTGCTAAGGTCCATAAAATGAAGACTGT...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CCA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCACAGTCTTCATTTTATaGACCTTAGCAGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: AVVIHNISCNSGSYATHITVFIL*TLAVVI
Trigger: GATGACAACTGCTAAGGTCCATAAAATGAAGACTGT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CCA 90 bp GCTGACGCCAGTTTTGGCCTCCTTCTCCCGGGGCACACGGAGCAATaGGCGGTCTTGCTCCGGAATGGGAGGGTTACCCGCTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ADASFGLLLPGHTEQ*AVLLRNGRVTRSFL
Trigger: GAGGAAGGAGCGGGTAACCCTCCCATTCCGGAGCAAGACCGCCCATTGCTCCGTGTGCCCCGGGAGAAGGAGGCCAAAACTGGCGTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS GCA 90 bp GTTTTGGCCTCCTTCTCCCGGGGCACACGGAGCAATGGGCGGTCTTaGTCCGGAATGGGAGGGTTACCCGCTCCTTCCTCATCGTCATGG +
Preference number: 5 (lower is better)
Translates to: VLASFSRGTRSNGRS*SGMGGLPAPSSSSW
Trigger: CCATGACGATGAGGAAGGAGCGGGTAACCCTCCCATTCCGGAGCAAGACCGCCCATTGCTCCGTGTGCCCCGGGAGAAGGAGGCCAAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CCA 90 bp TCTTGCTCCGGAATGGGAGGGTTACCCGCTCCTTCCTCATCGTCATaGGAACGGGCAGTGCCGGAAGGCACAGCTGGCTCCTCAGAGGAA +
Preference number: 5 (lower is better)
Translates to: SCSGMGGLPAPSSSS*ERAVPEGTAGSSEE
Trigger: TTCCTCTGAGGAGCCAGCTGTGCCTTCCGGCACTGCCCGTTCCCATGACGATGAGGAAGGAGCGGGTAACCCTCCCATTCCGGAGCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS GCA 90 bp GACGCTCCAGCTCAGAGAGGCTGTGTATCGATACCATCTTCGTCCTaGGGTCGGGGTTGTGTCCTGGGGCTCCTCCCAAGACACTCACAC +
Preference number: 5 (lower is better)
Translates to: DAPAQRGCVSIPSSS*GRGCVLGLLPRHSH
Trigger: GTGTGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCGATACACAGCCTCTCTGAGCTGGAGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370922.5
CDS GCA 90 bp GACGCTCCAGCTCAGAGAGGCTGTGTATCGATACCATCTTCGTCCTaGGGTCGGGGTTGTGTCCTGGGGCTCCTCCCAAGACACTCACTC +
Preference number: 5 (lower is better)
Translates to: DAPAQRGCVSIPSSS*GRGCVLGLLPRHSL
Trigger: GAGTGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCGATACACAGCCTCTCTGAGCTGGAGCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423277.5
CDS GCA 90 bp GACGCTCCAGCTCAGAGAGGCTGTGTATCGATACCATCTTCGTCCTaGGGTCGGGGTTGTGTCCTGGGGCTCCTCCCAAGACACTCACTA +
Preference number: 5 (lower is better)
Translates to: DAPAQRGCVSIPSSS*GRGCVLGLLPRHSL
Trigger: TAGTGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCGATACACAGCCTCTCTGAGCTGGAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS GCA 90 bp GACGCTCCAGCTCAGAGAGGCTGTGTATCGATACCATCTTCGTCCTaGGGTCGGGGTTGTGTCCTGGGGCTCCTCCCAAGACACTCATTG +
Preference number: 5 (lower is better)
Translates to: DAPAQRGCVSIPSSS*GRGCVLGLLPRHSL
Trigger: CAATGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCGATACACAGCCTCTCTGAGCTGGAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412432.6
ENST00000639280.1
CDS CCA 90 bp ATGCAGGGCCTTCAGCAGACGCTCCAGGGTATCACTGTGGCAGGGTaGCATCAGGTAGACCAGCAACTGCAGGGCAGAAAGCTGATCCTG +
Preference number: 5 (lower is better)
Translates to: MQGLQQTLQGITVAG*HQVDQQLQGRKLIL
Trigger: CAGGATCAGCTTTCTGCCCTGCAGTTGCTGGTCTACCTGATGCCACCCTGCCACAGTGATACCCTGGAGCGTCTGCTGAAGGCCCTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGAGCAATGGGCGGTCTaGCTCCGGAATGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCEQWAV*LRNGRV
Trigger: AACCCTCCCATTCCGGAGCAAGACCGCCCATTGCTC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGGCTGCATCATCCAATaGTCACTGGACCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCGCIIQ*SLDLVE
Trigger: CTCCACCAGGTCCAGTGACAATTGGATGATGCAGCC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR CAA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGTGGAAGTCATACGGTaGCCTGGGACCAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCVEVIR*PGTNCP
Trigger: TGGACAGTTGGTCCCAGGCAACCGTATGACTTCCAC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGTAGCACCGGGGAGCTaGGGCATGACACAGAAACAT +
Preference number: 5 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCVAPGS*GMTQKH
Trigger: ATGTTTCTGTGTCATGCCCAAGCTCCCCGGTGCTAC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCGTAGCACCGGGGAGCTaGGGCATGACACAGAAACAT +
Preference number: 5 (lower is better)
Translates to: PSIPSEGAGSVFGILILTVAPGS*GMTQKH
Trigger: ATGTTTCTGTGTCATGCCCAAGCTCCCCGGTGCTAC...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGTTCTAGCATGCCTCTaGAGGGCCTTTCCAACTGAG +
Preference number: 5 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCVLACL*RAFPTE
Trigger: CTCAGTTGGAAAGGCCCTCAAGAGGCATGCTAGAAC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CCA 90 bp GCTGTGTATCGATACCATCTTCGTCCTGCGGTCGGGGTTGTGTCCTaGGGCTCCTCCCAAGACACTCATTGCTTTCAACCTTCTCAAGGT +
Preference number: 5 (lower is better)
Translates to: AVYRYHLRPAVGVVS*GSSQDTHCFQPSQG
Trigger: ACCTTGAGAAGGTTGAAAGCAATGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCGATACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGTCCATCAATGCCAATaGAGTCCTCGCAGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCVHQCQ*SPRSSQ
Trigger: CTGAGAACTGCGAGGACTCAATTGGCATTGATGGAC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCGTTCTAGCATGCCTCTaGAGGGCCTTTCCAACTGAG +
Preference number: 5 (lower is better)
Translates to: PSIPSEGAGSVFGILILTVLACL*RAFPTE
Trigger: CTCAGTTGGAAAGGCCCTCAAGAGGCATGCTAGAAC...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAGTTCTAGCATGCCTCTaGAGGGCCTTTCCAACTGAG +
Preference number: 5 (lower is better)
Translates to: PSEGAGSVFGILILTRASVLACL*RAFPTE
Trigger: CTCAGTTGGAAAGGCCCTCAAGAGGCATGCTAGAAC...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS GCA 90 bp TGCACTCTGGATCTTCCTCAAGTTCCTGCGTCTGATAAAATCAAGTaGTTCCGGGCTGGACTTCCACACGCGCTTAGCAACCTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: CTLDLPQVPASDKIK*FRAGLPHALSNLPL
Trigger: CAGAGGCAGGTTGCTAAGCGCGTGTGGAAGTCCAGCCCGGAAGCACTTGATTTTATCAGACGCAGGAACTTGAGGAAGATCCAGAGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGGATCCCAGAAGTCGTaGGCCAATTGGAAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCGSQKS*ANWKGN
Trigger: ATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCGTCCATCAATGCCAATaGAGTCCTCGCAGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: PSIPSEGAGSVFGILILTVHQCQ*SPRSSQ
Trigger: CTGAGAACTGCGAGGACTCAATTGGCATTGATGGAC...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTGATCAATCCCCAGCTTaGTTTTCCTGGACTCTCTCT +
Preference number: 5 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCDQSPA*FSWTLS
Trigger: AGAGAGAGTCCAGGAAAACAAAGCTGGGGATTGATC...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGAGCAATGGGCGGTCTaGCTCCGGAATGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSEQWAV*LRNGRV
Trigger: AACCCTCCCATTCCGGAGCAAGACCGCCCATTGCTC...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCTTTGGGAGAGGCCATTaGGCAAGCCATTGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: PSIPSEGAGSVFGILILTFGRGH*ASHWSE
Trigger: TTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAA...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS TCA 90 bp CCTTTTGGATCCCAGAAGTCGTTGGCCAATTGGAAAGGAAATTTTTaGAAGCTGCAGGGTCTGCAGCAGCAGGGCTCCGTCTTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: PFGSQKSLANWKGNF*KLQGLQQQGSVFQL
Trigger: GAGCTGGAAGACGGAGCCCTGCTGCTGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCCAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS GCA 90 bp TGTCCATCAATGCCAATTGAGTCCTCGCAGTTCTCAGTGATTTTATaGAGGGCCTTCAGCAGACGCTCCAGGGTATCACTGTGGCAGGGT +
Preference number: 5 (lower is better)
Translates to: CPSMPIESSQFSVIL*RAFSRRSRVSLWQG
Trigger: ACCCTGCCACAGTGATACCCTGGAGCGTCTGCTGAAGGCCCTGCATAAAATCACTGAGAACTGCGAGGACTCAATTGGCATTGATGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGTCCTGCGGTCGGGGTaGTGTCCTGGGGCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITVLRSG*CPGAPP
Trigger: GGGAGGAGCCCCAGGACACAACCCCGACCGCAGGAC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCAGACTCATCTTCCTTTaGGATCCCAGAAGTCGTTGG +
Preference number: 5 (lower is better)
Translates to: PSIPSEGAGSVFGILILTRLIFL*DPRSRW
Trigger: CCAACGACTTCTGGGATCCAAAAGGAAGATGAGTCT...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCAACAACCTGGGGGATTaGTTTCGCAATCGGATTGAG +
Preference number: 5 (lower is better)
Translates to: PSIPSEGAGSVFGILILTNNLGD*FRNRIE
Trigger: CTCAATCCGATTGCGAAACAAATCCCCCAGGTTGTT...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTGAGCAATGGGCGGTCTaGCTCCGGAATGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFEQWAV*LRNGRV
Trigger: AACCCTCCCATTCCGGAGCAAGACCGCCCATTGCTC...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCACCTAAGGTGGTGGAGTaGCTGCGTGGACACGGCTAT +
Preference number: 5 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSPKVVE*LRGHGY
Trigger: ATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGG...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS TCA 90 bp GGACCAACTGTCCATCAATGCCAATTGAGTCCTCGCAGTTCTCAGTaGTTTTATGCAGGGCCTTCAGCAGACGCTCCAGGGTATCACTGT +
Preference number: 5 (lower is better)
Translates to: GPTVHQCQLSPRSSQ*FYAGPSADAPGYHC
Trigger: ACAGTGATACCCTGGAGCGTCTGCTGAAGGCCCTGCATAAAATCACTGAGAACTGCGAGGACTCAATTGGCATTGATGGACAGTTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGTCCTGCGGTCGGGGTaGTGTCCTGGGGCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: CLPQMSHQLKESLQREREVLRSG*CPGAPP
Trigger: GGGAGGAGCCCCAGGACACAACCCCGACCGCAGGAC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp CCAAGCATCCCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCACTACATCCAGACCTaGATCAAATTCTTCACGGAG +
Preference number: 5 (lower is better)
Translates to: PSIPSEGAGSVFGILILTHYIQT*IKFFTE
Trigger: CTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGTG...GGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGGGATGCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGTGGAAGTCATACGGTaGCCTGGGACCAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSVEVIR*PGTNCP
Trigger: TGGACAGTTGGTCCCAGGCAACCGTATGACTTCCAC...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGGAGCAATGGGCGGTCTaGCTCCGGAATGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: GKHLKICEVPWERCLPQMEQWAV*LRNGRV
Trigger: AACCCTCCCATTCCGGAGCAAGACCGCCCATTGCTC...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTCCTAAGGTGGTGGAGTaGCTGCGTGGACACGGCTAT +
Preference number: 5 (lower is better)
Translates to: ILILTRASGGTPSYLQIFPKVVE*LRGHGY
Trigger: ATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGG...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTAAACTGTACAGAATTTaGGGAGAGGCCATTTGGCAA +
Preference number: 5 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCKLYRI*GEAIWQ
Trigger: TTGCCAAATGGCCTCTCCCAAAATTCTGTACAGTTT...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS TCA 90 bp GGCAGCAAGCCTCAACAACCTGGGGGATTTGTTTCGCAATCGGATTaGGACTCATCTTCCTTTTGGATCCCAGAAGTCGTTGGCCAATTG +
Preference number: 5 (lower is better)
Translates to: GSKPQQPGGFVSQSD*DSSSFWIPEVVGQL
Trigger: CAATTGGCCAACGACTTCTGGGATCCAAAAGGAAGATGAGTCTCAATCCGATTGCGAAACAAATCCCCCAGGTTGTTGAGGCTTGCTGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS-3UTR CAA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTGTGGTAAGCAGTCTCTaGCAGCTTCAGACGCTCCAG +
Preference number: 5 (lower is better)
Translates to: ILILTRASGGTPSYLQIFVVSSL*QLQTLQ
Trigger: CTGGAGCGTCTGAAGCTGCAAGAGACTGCTTACCAC...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGTCAGTTCAAGATGCTaGCGGCGGGTAAACTCGTTC +
Preference number: 5 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSVSSRC*RRVNSF
Trigger: GAACGAGTTTACCCGCCGCAAGCATCTTGAACTGAC...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAGTAGCACCGGGGAGCTaGGGCATGACACAGAAACAT +
Preference number: 5 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEVAPGS*GMTQKH
Trigger: ATGTTTCTGTGTCATGCCCAAGCTCCCCGGTGCTAC...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGTTCTAGCATGCCTCTaGAGGGCCTTTCCAACTGAG +
Preference number: 5 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSVLACL*RAFPTE
Trigger: CTCAGTTGGAAAGGCCCTCAAGAGGCATGCTAGAAC...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCTAAGGTGGTGGAGTaGCTGCGTGGACACGGCTAT +
Preference number: 5 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPPKVVE*LRGHGY
Trigger: ATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGG...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp CCCAGTGAAGGGGCTGGCAGTGTGTTTGGAATTCTCATCCTGACCCGAGCATCAGGGTGTAAACACCAATaGTCTTTAAAGCAGATCCAG +
Preference number: 5 (lower is better)
Translates to: PSEGAGSVFGILILTRASGCKHQ*SLKQIQ
Trigger: CTGGATCTGCTTTAAAGACAATTGGTGTTTACACCC...TGATGCTCGGGTCAGGATGAGAATTCCAAACACACTGCCAGCCCCTTCACTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGGGAAATCCTAAGGTGGTGGAGTTGCTGCGTGGACACGGCTATGGGTTGGTGTAACAATCACAAATCTTaGAGCTCAGCAGTTGTTACC +
Preference number: 5 (lower is better)
Translates to: GEILRWWSCCVDTAMGWCNNHKS*SSAVVT
Trigger: GGTAACAACTGCTGAGCTCAAAGATTTGTGATTGTT...ACACCAACCCATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGGATTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS TCA 90 bp TGCTGCCTTCAGAAAAGGAATGCAGCCACCCATTCTGGAATCGGATaGTTATCAAGGCTGCATCATCCAATTGTCACTGGACCTGGTGGA +
Preference number: 5 (lower is better)
Translates to: CCLQKRNAATHSGIG*LSRLHHPIVTGPGG
Trigger: TCCACCAGGTCCAGTGACAATTGGATGATGCAGCCTTGATAATCATCCGATTCCAGAATGGGTGGCTGCATTCCTTTTCTGAAGGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS GCA 90 bp AAAGGAATGCAGCCACCCATTCTGGAATCGGATGATTATCAAGGCTaGATCATCCAATTGTCACTGGACCTGGTGGAGAGAACTATGGGG +
Preference number: 5 (lower is better)
Translates to: KGMQPPILESDDYQG*IIQLSLDLVERTMG
Trigger: CCCCATAGTTCTCTCCACCAGGTCCAGTGACAATTGGATGATGCAGCCTTGATAATCATCCGATTCCAGAATGGGTGGCTGCATTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR CAA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATACAGAGCAGCCTCTGGTaGTTTTTGCACGGCGGGGGC +
Preference number: 5 (lower is better)
Translates to: EHVPQFCTVLYKGITETIQSSLW*FLHGGG
Trigger: GCCCCCGCCGTGCAAAAACAACCAGAGGCTGCTCTG...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR CAA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGTGGGGCACAGTGCCCTaGCTGCCTTCAGAAAAGGAA +
Preference number: 5 (lower is better)
Translates to: GKHLKICEVPWERCLPQMWGTVP*LPSEKE
Trigger: TTCCTTTTCTGAAGGCAGCAAGGGCACTGTGCCCCA...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS-3UTR CAA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAGTGGTAAGCAGTCTCTaGCAGCTTCAGACGCTCCAG +
Preference number: 5 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPVVSSL*QLQTLQ
Trigger: CTGGAGCGTCTGAAGCTGCAAGAGACTGCTTACCAC...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGCCTAAGGTGGTGGAGTaGCTGCGTGGACACGGCTAT +
Preference number: 5 (lower is better)
Translates to: SAVILDHMQPISVCYQSMPKVVE*LRGHGY
Trigger: ATAGCCGTGTCCACGCAGCAACTCCACCACCTTAGG...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCATTTGGGAGAGGCCATTaGGCAAGCCATTGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSFGRGH*ASHWSE
Trigger: TTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAA...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS TCA 90 bp GATCATCTGGCAGCAGAGAATCCTTCATGTCACGGAAAAACTCCTTaGGGAGTGCAGCCACATCATGCACATTCTGATTGTCATCCAGCA +
Preference number: 5 (lower is better)
Translates to: DHLAAENPSCHGKTP*GVQPHHAHSDCHPA
Trigger: TGCTGGATGACAATCAGAATGTGCATGATGTGGCTGCACTCCTCAAGGAGTTTTTCCGTGACATGAAGGATTCTCTGCTGCCAGATGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS TCA 90 bp CCTGGAAGAGGACATCCCAGTTATCAATCATGGCACGGACCACATTaGCAGAAGCAACATAGTGATCAATCCCCAGCTTTGTTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: PGRGHPSYQSWHGPH*QKQHSDQSPALFSW
Trigger: CCAGGAAAACAAAGCTGGGGATTGATCACTATGTTGCTTCTGTCAATGTGGTCCGTGCCATGATTGATAACTGGGATGTCCTCTTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS GCA 90 bp TGGCAGCAGAGAATCCTTCATGTCACGGAAAAACTCCTTGAGGAGTaGAGCCACATCATGCACATTCTGATTGTCATCCAGCACTACATC +
Preference number: 5 (lower is better)
Translates to: WQQRILHVTEKLLEE*SHIMHILIVIQHYI
Trigger: GATGTAGTGCTGGATGACAATCAGAATGTGCATGATGTGGCTGCACTCCTCAAGGAGTTTTTCCGTGACATGAAGGATTCTCTGCTGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCACTAATGCCAAATGTCTaGTGTGATACAGCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSLMPNV*CDTALC
Trigger: GCAGAGGGCTGTATCACACAAGACATTTGGCATTAG...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGGTCAGTTCAAGATGCTaGCGGCGGGTAAACTCGTTC +
Preference number: 5 (lower is better)
Translates to: GKHLKICEVPWERCLPQMVSSRC*RRVNSF
Trigger: GAACGAGTTTACCCGCCGCAAGCATCTTGAACTGAC...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTCCTGGGGCTTTAAAGTaGCTGTCAGGAGGAATGACA +
Preference number: 5 (lower is better)
Translates to: ILILTRASGGTPSYLQIFPGALK*LSGGMT
Trigger: TGTCATTCCTCCTGACAGCAACTTTAAAGCCCCAGG...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAACCTGGGGCTTTAAAGTaGCTGTCAGGAGGAATGACA +
Preference number: 5 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEPGALK*LSGGMT
Trigger: TGTCATTCCTCCTGACAGCAACTTTAAAGCCCCAGG...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAGTCCATCAATGCCAATaGAGTCCTCGCAGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEVHQCQ*SPRSSQ
Trigger: CTGAGAACTGCGAGGACTCAATTGGCATTGATGGAC...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGGTGGAAGTCATACGGTaGCCTGGGACCAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEVEVIR*PGTNCP
Trigger: TGGACAGTTGGTCCCAGGCAACCGTATGACTTCCAC...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGGTGGAAGTCATACGGTaGCCTGGGACCAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: SAVILDHMQPISVCYQSMVEVIR*PGTNCP
Trigger: TGGACAGTTGGTCCCAGGCAACCGTATGACTTCCAC...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCAATCCCCAGCTTaGTTTTCCTGGACTCTCTCT +
Preference number: 5 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSDQSPA*FSWTLS
Trigger: AGAGAGAGTCCAGGAAAACAAAGCTGGGGATTGATC...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGCAATGGGCGGTCTaGCTCCGGAATGGGAGGGTT +
Preference number: 5 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITEQWAV*LRNGRV
Trigger: AACCCTCCCATTCCGGAGCAAGACCGCCCATTGCTC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CCA 90 bp GCAATCGGATTGAGACTCATCTTCCTTTTGGATCCCAGAAGTCGTTaGCCAATTGGAAAGGAAATTTTTGAAAGCTGCAGGGTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: AIGLRLIFLLDPRSR*PIGKEIFESCRVCS
Trigger: GCTGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCCAAAAGGAAGATGAGTCTCAATCCGATTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS-3UTR CAA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGGTCAGTTCAAGATGCTaGCGGCGGGTAAACTCGTTC +
Preference number: 5 (lower is better)
Translates to: SAVILDHMQPISVCYQSMVSSRC*RRVNSF
Trigger: GAACGAGTTTACCCGCCGCAAGCATCTTGAACTGAC...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAGGATCCCAGAAGTCGTaGGCCAATTGGAAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEGSQKS*ANWKGN
Trigger: ATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCC...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTAGACTCATCTTCCTTTaGGATCCCAGAAGTCGTTGG +
Preference number: 5 (lower is better)
Translates to: ILILTRASGGTPSYLQIFRLIFL*DPRSRW
Trigger: CCAACGACTTCTGGGATCCAAAAGGAAGATGAGTCT...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAAACAACCTGGGGGATTaGTTTCGCAATCGGATTGAG +
Preference number: 5 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSENNLGD*FRNRIE
Trigger: CTCAATCCGATTGCGAAACAAATCCCCCAGGTTGTT...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTCTAATGCCAAATGTCTaGTGTGATACAGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: ILILTRASGGTPSYLQIFLMPNV*CDTAGE
Trigger: CTCCCCAGCTGTATCACACAAGACATTTGGCATTAG...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370921.1
CDS-3UTR CAA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAACTCCCAAGACACTCATaGCTTTCAACCTTCTCAAGG +
Preference number: 5 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSELPRHS*LSTFSR
Trigger: CCTTGAGAAGGTTGAAAGCAATGAGTGTCTTGGGAG...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAGTGGTAAGCAGTCTCTaGCAGCTTCAGACGCTCCAG +
Preference number: 5 (lower is better)
Translates to: EHVPQFCTVLYKGITETIVVSSL*QLQTLQ
Trigger: CTGGAGCGTCTGAAGCTGCAAGAGACTGCTTACCAC...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGCTAATGCCAAATGTCTaGTGTGATACAGCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GKHLKICEVPWERCLPQMLMPNV*CDTALC
Trigger: GCAGAGGGCTGTATCACACAAGACATTTGGCATTAG...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCATTGGAAAGGAAATTTTaGAAAGCTGCAGGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSLERKF*KAAGSA
Trigger: TGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCAA...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAGGATCCCAGAAGTCGTaGGCCAATTGGAAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPGSQKS*ANWKGN
Trigger: ATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCC...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCATGTTTCGCAATCGGATaGAGACTCATCTTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSCFAIG*RLIFLL
Trigger: CAAAAGGAAGATGAGTCTCAATCCGATTGCGAAACA...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTCACTACATCCAGACCTaGATCAAATTCTTCACGGAG +
Preference number: 5 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFHYIQT*IKFFTE
Trigger: CTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGTG...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGCCTGGGGCTTTAAAGTaGCTGTCAGGAGGAATGACA +
Preference number: 5 (lower is better)
Translates to: SAVILDHMQPISVCYQSMPGALK*LSGGMT
Trigger: TGTCATTCCTCCTGACAGCAACTTTAAAGCCCCAGG...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAAGAGCTCTGTCAGGTTaGAATTCGGAGAGGAAATGT +
Preference number: 5 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPRALSG*NSERKC
Trigger: ACATTTCCTCTCCGAATTCAAACCTGACAGAGCTCT...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGCTAATGCCAAATGTCTaGTGTGATACAGCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: SAVILDHMQPISVCYQSMLMPNV*CDTALC
Trigger: GCAGAGGGCTGTATCACACAAGACATTTGGCATTAG...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGTCAGTTCAAGATGCTaGCGGCGGGTAAACTCGTTC +
Preference number: 5 (lower is better)
Translates to: AVVIHNISCNSGSYATHIVSSRC*RRVNSF
Trigger: GAACGAGTTTACCCGCCGCAAGCATCTTGAACTGAC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTTTGGAAAGGAAATTTTaGAAAGCTGCAGGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFLERKF*KAAGSA
Trigger: TGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCAA...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTTTGGAAAGGAAATTTTaGAAAGCTGCAGGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: ILILTRASGGTPSYLQIFLERKF*KAAGSA
Trigger: TGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCAA...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGAGACTCATCTTCCTTTaGGATCCCAGAAGTCGTTGG +
Preference number: 5 (lower is better)
Translates to: SAVILDHMQPISVCYQSMRLIFL*DPRSRW
Trigger: CCAACGACTTCTGGGATCCAAAAGGAAGATGAGTCT...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAATGTTTCGCAATCGGATaGAGACTCATCTTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSECFAIG*RLIFLL
Trigger: CAAAAGGAAGATGAGTCTCAATCCGATTGCGAAACA...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGCACTACATCCAGACCTaGATCAAATTCTTCACGGAG +
Preference number: 5 (lower is better)
Translates to: GKHLKICEVPWERCLPQMHYIQT*IKFFTE
Trigger: CTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGTG...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGTGGAAGTCATACGGTaGCCTGGGACCAACTGTCCA +
Preference number: 5 (lower is better)
Translates to: CLPQMSHQLKESLQREREVEVIR*PGTNCP
Trigger: TGGACAGTTGGTCCCAGGCAACCGTATGACTTCCAC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGGATCAATCCCCAGCTTaGTTTTCCTGGACTCTCTCT +
Preference number: 5 (lower is better)
Translates to: SAVILDHMQPISVCYQSMDQSPA*FSWTLS
Trigger: AGAGAGAGTCCAGGAAAACAAAGCTGGGGATTGATC...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGTAGCACCGGGGAGCTaGGGCATGACACAGAAACAT +
Preference number: 5 (lower is better)
Translates to: CLPQMSHQLKESLQREREVAPGS*GMTQKH
Trigger: ATGTTTCTGTGTCATGCCCAAGCTCCCCGGTGCTAC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTTTTCGCATTAATTGTTaGTCAGCTGTCAGTAGGCTG +
Preference number: 5 (lower is better)
Translates to: ILILTRASGGTPSYLQIFFRINC*SAVSRL
Trigger: CAGCCTACTGACAGCTGACAAACAATTAATGCGAAA...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTAAACTGTACAGAATTTaGGGAGAGGCCATTTGGCAA +
Preference number: 5 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFKLYRI*GEAIWQ
Trigger: TTGCCAAATGGCCTCTCCCAAAATTCTGTACAGTTT...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAGGGTGTAAACACCAATaGTCTTTAAAGCAGATCCAG +
Preference number: 5 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEGCKHQ*SLKQIQ
Trigger: CTGGATCTGCTTTAAAGACAATTGGTGTTTACACCC...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTTTGGAATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAAACAATCACAAATCTTaGAGCTCAGCAGTTGTTACC +
Preference number: 5 (lower is better)
Translates to: VWNSHPDPSIRWNSFLPSNNHKS*SSAVVT
Trigger: GGTAACAACTGCTGAGCTCAAAGATTTGTGATTGTT...TGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAATTCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGAGAGCTCTGTCAGGTTaGAATTCGGAGAGGAAATGT +
Preference number: 5 (lower is better)
Translates to: YRILGEAIWQAIGLNNLERALSG*NSERKC
Trigger: ACATTTCCTCTCCGAATTCAAACCTGACAGAGCTCT...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCATGTTTCGCAATCGGATaGAGACTCATCTTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPCFAIG*RLIFLL
Trigger: CAAAAGGAAGATGAGTCTCAATCCGATTGCGAAACA...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ATTCTCATCCTGACCCGAGCATCAGGTGGAACTCCTTCTTACCTTCAGATCTTTATGTTTTTCAATGAATaGGCAGCAAGCCTCAACAAC +
Preference number: 5 (lower is better)
Translates to: ILILTRASGGTPSYLQIFMFFNE*AASLNN
Trigger: GTTGTTGAGGCTTGCTGCCAATTCATTGAAAAACAT...AAAGATCTGAAGGTAAGAAGGAGTTCCACCTGATGCTCGGGTCAGGATGAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp ACACAGAAACATCTCTGCTTTTACCAGCAGAAGAGACCAAGCATCCCCAGTGAAATGTTTTTCAATGAATaGGCAGCAAGCCTCAACAAC +
Preference number: 5 (lower is better)
Translates to: TQKHLCFYQQKRPSIPSEMFFNE*AASLNN
Trigger: GTTGTTGAGGCTTGCTGCCAATTCATTGAAAAACAT...TTCACTGGGGATGCTTGGTCTCTTCTGCTGGTAAAAGCAGAGATGTTTCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTGTGTTACCAGAGCATGCACTACATCCAGACCTaGATCAAATTCTTCACGGAG +
Preference number: 5 (lower is better)
Translates to: SAVILDHMQPISVCYQSMHYIQT*IKFFTE
Trigger: CTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGTG...CATGCTCTGGTAACACACAGATATGGGTTGCATATGATCCAGAATTACAGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGCACTACATCCAGACCTaGATCAAATTCTTCACGGAG +
Preference number: 5 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEHYIQT*IKFFTE
Trigger: CTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGTG...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGTCCATCAATGCCAATaGAGTCCTCGCAGTTCTCAG +
Preference number: 5 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITVHQCQ*SPRSSQ
Trigger: CTGAGAACTGCGAGGACTCAATTGGCATTGATGGAC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGTTCTAGCATGCCTCTaGAGGGCCTTTCCAACTGAG +
Preference number: 5 (lower is better)
Translates to: CLPQMSHQLKESLQREREVLACL*RAFPTE
Trigger: CTCAGTTGGAAAGGCCCTCAAGAGGCATGCTAGAAC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCATTTCGCATTAATTGTTaGTCAGCTGTCAGTAGGCTG +
Preference number: 5 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPFRINC*SAVSRL
Trigger: CAGCCTACTGACAGCTGACAAACAATTAATGCGAAA...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATATTTGGGAGAGGCCATTaGGCAAGCCATTGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: EHVPQFCTVLYKGITETIFGRGH*ASHWSE
Trigger: TTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAA...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACATTTGGGAGAGGCCATTaGGCAAGCCATTGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITFGRGH*ASHWSE
Trigger: TTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAA...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TTTACCTTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCAAAACTGTACAGAATTTaGGGAGAGGCCATTTGGCAA +
Preference number: 5 (lower is better)
Translates to: FTFNSLLNVSCDIPDVPPKLYRI*GEAIWQ
Trigger: TTGCCAAATGGCCTCTCCCAAAATTCTGTACAGTTT...TGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAAGGTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TTCAACTCTCTCCTTAATGTTTCCTGTGACATCCCAGATGTACCCCCACCCTTTAACAATCACAAATCTTaGAGCTCAGCAGTTGTTACC +
Preference number: 5 (lower is better)
Translates to: FNSLLNVSCDIPDVPPPFNNHKS*SSAVVT
Trigger: GGTAACAACTGCTGAGCTCAAAGATTTGTGATTGTT...AAAGGGTGGGGGTACATCTGGGATGTCACAGGAAACATTAAGGAGAGAGTTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCGGATCCCAGAAGTCGTaGGCCAATTGGAAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: AVVIHNISCNSGSYATHIGSQKS*ANWKGN
Trigger: ATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCC...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGGATCCCAGAAGTCGTaGGCCAATTGGAAAGGAAAT +
Preference number: 5 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITGSQKS*ANWKGN
Trigger: ATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCC...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAAGACTCATCTTCCTTTaGGATCCCAGAAGTCGTTGG +
Preference number: 5 (lower is better)
Translates to: EHVPQFCTVLYKGITETIRLIFL*DPRSRW
Trigger: CCAACGACTTCTGGGATCCAAAAGGAAGATGAGTCT...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCAACAACCTGGGGGATTaGTTTCGCAATCGGATTGAG +
Preference number: 5 (lower is better)
Translates to: AVVIHNISCNSGSYATHINNLGD*FRNRIE
Trigger: CTCAATCCGATTGCGAAACAAATCCCCCAGGTTGTT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GGAAAGCATCTCAAGATTTGTGAGGTTCCCTGGGAAAGGTGTTTACCACAAATGATGTTTTTCAATGAATaGGCAGCAAGCCTCAACAAC +
Preference number: 5 (lower is better)
Translates to: GKHLKICEVPWERCLPQMMFFNE*AASLNN
Trigger: GTTGTTGAGGCTTGCTGCCAATTCATTGAAAAACAT...CATTTGTGGTAAACACCTTTCCCAGGGAACCTCACAAATCTTGAGATGCTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAACCTGGGGCTTTAAAGTaGCTGTCAGGAGGAATGACA +
Preference number: 5 (lower is better)
Translates to: CLPQMSHQLKESLQREREPGALK*LSGGMT
Trigger: TGTCATTCCTCCTGACAGCAACTTTAAAGCCCCAGG...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GTGTTACCAGAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACACTCCCAAGACACTCATaGCTTTCAACCTTCTCAAGG +
Preference number: 5 (lower is better)
Translates to: VLPEHVPQFCTVLYKGITLPRHS*LSTFSR
Trigger: CCTTGAGAAGGTTGAAAGCAATGAGTGTCTTGGGAG...TGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTCTGGTAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAAGAGCTCTGTCAGGTTaGAATTCGGAGAGGAAATGT +
Preference number: 5 (lower is better)
Translates to: EHVPQFCTVLYKGITETIRALSG*NSERKC
Trigger: ACATTTCCTCTCCGAATTCAAACCTGACAGAGCTCT...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAACTAATGCCAAATGTCTaGTGTGATACAGCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: CLPQMSHQLKESLQRERELMPNV*CDTALC
Trigger: GCAGAGGGCTGTATCACACAAGACATTTGGCATTAG...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAAACAACCTGGGGGATTaGTTTCGCAATCGGATTGAG +
Preference number: 5 (lower is better)
Translates to: CLPQMSHQLKESLQRERENNLGD*FRNRIE
Trigger: CTCAATCCGATTGCGAAACAAATCCCCCAGGTTGTT...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGATGTTTTTCAATGAATaGGCAGCAAGCCTCAACAAC +
Preference number: 5 (lower is better)
Translates to: YRILGEAIWQAIGLNNLEMFFNE*AASLNN
Trigger: GTTGTTGAGGCTTGCTGCCAATTCATTGAAAAACAT...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAAGATCAATCCCCAGCTTaGTTTTCCTGGACTCTCTCT +
Preference number: 5 (lower is better)
Translates to: CLPQMSHQLKESLQREREDQSPA*FSWTLS
Trigger: AGAGAGAGTCCAGGAAAACAAAGCTGGGGATTGATC...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TACAGAATTTTGGGAGAGGCCATTTGGCAAGCCATTGGTCTGAATAATTTGGAGAACAATCACAAATCTTaGAGCTCAGCAGTTGTTACC +
Preference number: 5 (lower is better)
Translates to: YRILGEAIWQAIGLNNLENNHKS*SSAVVT
Trigger: GGTAACAACTGCTGAGCTCAAAGATTTGTGATTGTT...CTCCAAATTATTCAGACCAATGGCTTGCCAAATGGCCTCTCCCAAAATTCTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATATTGGAAAGGAAATTTTaGAAAGCTGCAGGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: EHVPQFCTVLYKGITETILERKF*KAAGSA
Trigger: TGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCAA...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCTGTTTCGCAATCGGATaGAGACTCATCTTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: AVVIHNISCNSGSYATHICFAIG*RLIFLL
Trigger: CAAAAGGAAGATGAGTCTCAATCCGATTGCGAAACA...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATATGTTTCGCAATCGGATaGAGACTCATCTTCCTTTTG +
Preference number: 5 (lower is better)
Translates to: EHVPQFCTVLYKGITETICFAIG*RLIFLL
Trigger: CAAAAGGAAGATGAGTCTCAATCCGATTGCGAAACA...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GCAGTTGTCATCCATAATATCAGCTGTAATTCTGGATCATATGCAACCCATATCATGTTTTTCAATGAATaGGCAGCAAGCCTCAACAAC +
Preference number: 5 (lower is better)
Translates to: AVVIHNISCNSGSYATHIMFFNE*AASLNN
Trigger: GTTGTTGAGGCTTGCTGCCAATTCATTGAAAAACAT...GATATGGGTTGCATATGATCCAGAATTACAGCTGATATTATGGATGACAACTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp TGTTTACCACAAATGTCACATCAATTAAAGGAAAGTCTGCAGAGAGAGAGAGAATTTCGCATTAATTGTTaGTCAGCTGTCAGTAGGCTG +
Preference number: 5 (lower is better)
Translates to: CLPQMSHQLKESLQREREFRINC*SAVSRL
Trigger: CAGCCTACTGACAGCTGACAAACAATTAATGCGAAA...TTCTCTCTCTCTCTGCAGACTTTCCTTTAATTGATGTGACATTTGTGGTAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS-3UTR CAA 90 bp GAGCATGTCCCACAATTTTGTACTGTCCTGTATAAAGGAATTACAGAGACGATAAACAATCACAAATCTTaGAGCTCAGCAGTTGTTACC +
Preference number: 5 (lower is better)
Translates to: EHVPQFCTVLYKGITETINNHKS*SSAVVT
Trigger: GGTAACAACTGCTGAGCTCAAAGATTTGTGATTGTT...TATCGTCTCTGTAATTCCTTTATACAGGACAGTACAAAATTGTGGGACATGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CCA 72 bp CGATACCATCTTCGTCCTGCGGTCGGGGTTGTGTCCTaGGGCTCCTCCCAAGACACTCACACGGCGGGGGCG +
Preference number: 6 (lower is better)
Translates to: RYHLRPAVGVVS*GSSQDTHTAGA
Trigger: CGCCCCCGCCGTGTGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370922.5
CDS TCA 72 bp CTTCGCACCACGTTTCCCCGACGACGGCCCGCAGCCTaGCCGGTGGCTTCTTCAACCTGCATCGTGGCTGTC +
Preference number: 6 (lower is better)
Translates to: LRTTFPRRRPAA*PVASSTCIVAV
Trigger: GACAGCCACGATGCAGGTTGAAGAAGCCACCGGTCAGGCTGCGGGCCGTCGTCGGGGAAACGTGGTGCGAAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS TCA 72 bp TATCCACAGACACTGCACCTCGACGCCCACGGCGAGTaGACTCCCGGGGCAAGGTGGGCTCATTCCGCCTGC +
Preference number: 6 (lower is better)
Translates to: YPQTLHLDAHGE*TPGARWAHSAC
Trigger: GCAGGCGGAATGAGCCCACCTTGCCCCGGGAGTTCACTCGCCGTGGGCGTCGAGGTGCAGTGTCTGTGGATA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS CAA 72 bp CTCCTTCTCCCGGGGCACACGGAGCAATGGGCGGTCTaGCTCCGGAATGGGAGGGTTACCCGCTCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LLLPGHTEQWAV*LRNGRVTRSFL
Trigger: GAGGAAGGAGCGGGTAACCCTCCCATTCCGGAGCAAGACCGCCCATTGCTCCGTGTGCCCCGGGAGAAGGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS TCA 72 bp AGGCCGAGGCGAAAAGGCAGTCCAGTATCCACGCCATaGCCCGCGCTGAGTGCCCGGCAGCTCGCAGTTAAC +
Preference number: 6 (lower is better)
Translates to: RPRRKGSPVSTP*PALSARQLAVN
Trigger: GTTAACTGCGAGCTGCCGGGCACTCAGCGCGGGTCATGGCGTGGATACTGGACTGCCTTTTCGCCTCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS TCA 72 bp ACTCCCGGGGCAAGGTGGGCTCATTCCGCCTGCGACTaGAAAAGCGCCGGATGCGGCCAAACACCCTTCGCA +
Preference number: 6 (lower is better)
Translates to: TPGARWAHSACD*KSAGCGQTPFA
Trigger: TGCGAAGGGTGTTTGGCCGCATCCGGCGCTTTTTCAGTCGCAGGCGGAATGAGCCCACCTTGCCCCGGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS GCA 72 bp TCCTTCTCCCGGGGCACACGGAGCAATGGGCGGTCTTaGTCCGGAATGGGAGGGTTACCCGCTCCTTCCTCA +
Preference number: 6 (lower is better)
Translates to: SFSRGTRSNGRS*SGMGGLPAPSS
Trigger: TGAGGAAGGAGCGGGTAACCCTCCCATTCCGGAGCAAGACCGCCCATTGCTCCGTGTGCCCCGGGAGAAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CCA 72 bp GGAATGGGAGGGTTACCCGCTCCTTCCTCATCGTCATaGGAACGGGCAGTGCCGGAAGGCACAGCTGGCTCC +
Preference number: 6 (lower is better)
Translates to: GMGGLPAPSSSS*ERAVPEGTAGS
Trigger: GGAGCCAGCTGTGCCTTCCGGCACTGCCCGTTCCCATGACGATGAGGAAGGAGCGGGTAACCCTCCCATTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CCA 72 bp GGGGCACACGGAGCAATGGGCGGTCTTGCTCCGGAATaGGAGGGTTACCCGCTCCTTCCTCATCGTCATGGG +
Preference number: 6 (lower is better)
Translates to: GAHGAMGGLAPE*EGYPLLPHRHG
Trigger: CCCATGACGATGAGGAAGGAGCGGGTAACCCTCCCATTCCGGAGCAAGACCGCCCATTGCTCCGTGTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CCA 72 bp AGTTTTGGCCTCCTTCTCCCGGGGCACACGGAGCAATaGGCGGTCTTGCTCCGGAATGGGAGGGTTACCCGC +
Preference number: 6 (lower is better)
Translates to: SFGLLLPGHTEQ*AVLLRNGRVTR
Trigger: GCGGGTAACCCTCCCATTCCGGAGCAAGACCGCCCATTGCTCCGTGTGCCCCGGGAGAAGGAGGCCAAAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CCA 72 bp CGATACCATCTTCGTCCTGCGGTCGGGGTTGTGTCCTaGGGCTCCTCCCAAGACACTCACTCTTGGCGAGCC +
Preference number: 6 (lower is better)
Translates to: RYHLRPAVGVVS*GSSQDTHSWRA
Trigger: GGCTCGCCAAGAGTGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423277.5
CDS CAA 90 bp AGTTTTGGCCTCCTTCTCCCGGGGCACACGGAGCAATGGGCGGTCTaGCTCCGGAATGGGAGGGTTACCCGCTCCTTCCTCATCGTCATG +
Preference number: 6 (lower is better)
Translates to: SFGLLLPGHTEQWAV*LRNGRVTRSFLIVM
Trigger: CATGACGATGAGGAAGGAGCGGGTAACCCTCCCATTCCGGAGCAAGACCGCCCATTGCTCCGTGTGCCCCGGGAGAAGGAGGCCAAAACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS GCA 72 bp GCTCAGAGAGGCTGTGTATCGATACCATCTTCGTCCTaGGGTCGGGGTTGTGTCCTGGGGCTCCTCCCAAGA +
Preference number: 6 (lower is better)
Translates to: AQRGCVSIPSSS*GRGCVLGLLPR
Trigger: TCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCGATACACAGCCTCTCTGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS CAA 72 bp CTGTGTATCGATACCATCTTCGTCCTGCGGTCGGGGTaGTGTCCTGGGGCTCCTCCCAAGACACTCACACGG +
Preference number: 6 (lower is better)
Translates to: LCIDTIFVLRSG*CPGAPPKTLTR
Trigger: CCGTGTGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCGATACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370922.5
CDS CAA 90 bp TCAGAGAGGCTGTGTATCGATACCATCTTCGTCCTGCGGTCGGGGTaGTGTCCTGGGGCTCCTCCCAAGACACTCACTCTTGGCGAGCCT +
Preference number: 6 (lower is better)
Translates to: SERLCIDTIFVLRSG*CPGAPPKTLTLGEP
Trigger: AGGCTCGCCAAGAGTGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCGATACACAGCCTCTCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423277.5
CDS GCA 72 bp CAGCTGGCTCCTCAGAGGAACCTTCATCAGAAGGCTTaGTTTGAGCAAGGACAGCAGCCCGGGCTTCAGCAG +
Preference number: 6 (lower is better)
Translates to: QLAPQRNLHQKA*FEQGQQPGLQQ
Trigger: CTGCTGAAGCCCGGGCTGCTGTCCTTGCTCAAAGCAAGCCTTCTGATGAAGGTTCCTCTGAGGAGCCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CCA 72 bp ATCGTCATGGGAACGGGCAGTGCCGGAAGGCACAGCTaGCTCCTCAGAGGAACCTTCATCAGAAGGCTTGCT +
Preference number: 6 (lower is better)
Translates to: IVMGTGSAGRHS*LLRGTFIRRLA
Trigger: AGCAAGCCTTCTGATGAAGGTTCCTCTGAGGAGCCAGCTGTGCCTTCCGGCACTGCCCGTTCCCATGACGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CCA 72 bp CGATACCATCTTCGTCCTGCGGTCGGGGTTGTGTCCTaGGGCTCCTCCCAAGACACTCATTGCTTTCAACCT +
Preference number: 6 (lower is better)
Translates to: RYHLRPAVGVVS*GSSQDTHCFQP
Trigger: AGGTTGAAAGCAATGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412432.6
ENST00000639280.1
CDS CAA 72 bp TGGCTCCTCAGAGGAACCTTCATCAGAAGGCTTGCTTaGAGCAAGGACAGCAGCCCGGGCTTCAGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: WLLRGTFIRRLA*SKDSSPGFSRG
Trigger: ACCTCTGCTGAAGCCCGGGCTGCTGTCCTTGCTCAAAGCAAGCCTTCTGATGAAGGTTCCTCTGAGGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CAA 72 bp CTGTGTATCGATACCATCTTCGTCCTGCGGTCGGGGTaGTGTCCTGGGGCTCCTCCCAAGACACTCATTGCT +
Preference number: 6 (lower is better)
Translates to: LCIDTIFVLRSG*CPGAPPKTLIA
Trigger: AGCAATGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCGATACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412432.6
ENST00000639280.1
CDS CAA 72 bp CTGTGTATCGATACCATCTTCGTCCTGCGGTCGGGGTaGTGTCCTGGGGCTCCTCCCAAGACACTCACTCTT +
Preference number: 6 (lower is better)
Translates to: LCIDTIFVLRSG*CPGAPPKTLTL
Trigger: AAGAGTGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCGATACACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423277.5
CDS CAA 72 bp CTGTGTATCGATACCATCTTCGTCCTGCGGTCGGGGTaGTGTCCTGGGGCTCCTCCCAAGACACTCACTAAA +
Preference number: 6 (lower is better)
Translates to: LCIDTIFVLRSG*CPGAPPKTLTK
Trigger: TTTAGTGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCGATACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS CAA 72 bp GAAATGTCTGGCCACGAGTTCGTGGTAAGCAGTCTCTaGCAGCTTCAGACGCTCCAGCTCAGAGAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: EMSGHEFVVSSL*QLQTLQLREAV
Trigger: CACAGCCTCTCTGAGCTGGAGCGTCTGAAGCTGCAAGAGACTGCTTACCACGAACTCGTGGCCAGACATTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS CAA 90 bp TCAGAGAGGCTGTGTATCGATACCATCTTCGTCCTGCGGTCGGGGTaGTGTCCTGGGGCTCCTCCCAAGACACTCATTGCTTTCAACCTT +
Preference number: 6 (lower is better)
Translates to: SERLCIDTIFVLRSG*CPGAPPKTLIAFNL
Trigger: AAGGTTGAAAGCAATGAGTGTCTTGGGAGGAGCCCCAGGACACAACCCCGACCGCAGGACGAAGATGGTATCGATACACAGCCTCTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412432.6
ENST00000639280.1
CDS CAA 90 bp TTCGGAGAGGAAATGTCTGGCCACGAGTTCGTGGTAAGCAGTCTCTaGCAGCTTCAGACGCTCCAGCTCAGAGAGGCTGTGTATCGATAC +
Preference number: 6 (lower is better)
Translates to: FGEEMSGHEFVVSSL*QLQTLQLREAVYRY
Trigger: GTATCGATACACAGCCTCTCTGAGCTGGAGCGTCTGAAGCTGCAAGAGACTGCTTACCACGAACTCGTGGCCAGACATTTCCTCTCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS TCA 72 bp GTCCATCAATGCCAATTGAGTCCTCGCAGTTCTCAGTaGTTTTATGCAGGGCCTTCAGCAGACGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: VHQCQLSPRSSQ*FYAGPSADAPG
Trigger: CCCTGGAGCGTCTGCTGAAGGCCCTGCATAAAATCACTGAGAACTGCGAGGACTCAATTGGCATTGATGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS GCA 72 bp AGTCGTTGGCCAATTGGAAAGGAAATTTTTGAAAGCTaGAGGGTCTGCAGCAGCAGGGCTCCGTCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: SRWPIGKEIFES*RVCSSRAPSSS
Trigger: GCTGGAAGACGGAGCCCTGCTGCTGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCAATTGGCCAACGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS CAA 90 bp CCACCCATTCTGGAATCGGATGATTATCAAGGCTGCATCATCCAATaGTCACTGGACCTGGTGGAGAGAACTATGGGGGTGGGGGTAGAG +
Preference number: 6 (lower is better)
Translates to: PPILESDDYQGCIIQ*SLDLVERTMGVGVE
Trigger: CTCTACCCCCACCCCCATAGTTCTCTCCACCAGGTCCAGTGACAATTGGATGATGCAGCCTTGATAATCATCCGATTCCAGAATGGGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS CAA 90 bp TCCTTTTGGATCCCAGAAGTCGTTGGCCAATTGGAAAGGAAATTTTaGAAAGCTGCAGGGTCTGCAGCAGCAGGGCTCCGTCTTCCAGCT +
Preference number: 6 (lower is better)
Translates to: SFWIPEVVGQLERKF*KAAGSAAAGLRLPA
Trigger: AGCTGGAAGACGGAGCCCTGCTGCTGCAGACCCTGCAGCTTTCAAAAATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCCAAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS TCA 72 bp ACGGTTGCCTGGGACCAACTGTCCATCAATGCCAATTaGGTCCTCGCAGTTCTCAGTGATTTTATGCAGGGC +
Preference number: 6 (lower is better)
Translates to: TVAWDQLSINAN*VLAVLSDFMQG
Trigger: GCCCTGCATAAAATCACTGAGAACTGCGAGGACTCAATTGGCATTGATGGACAGTTGGTCCCAGGCAACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS GCA 72 bp TGGGGCACAGTGCCCTTGCTGCCTTCAGAAAAGGAATaGAGCCACCCATTCTGGAATCGGATGATTATCAAG +
Preference number: 6 (lower is better)
Translates to: WGTVPLLPSEKE*SHPFWNRMIIK
Trigger: CTTGATAATCATCCGATTCCAGAATGGGTGGCTGCATTCCTTTTCTGAAGGCAGCAAGGGCACTGTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS GCA 72 bp ATGCCAATTGAGTCCTCGCAGTTCTCAGTGATTTTATaGAGGGCCTTCAGCAGACGCTCCAGGGTATCACTG +
Preference number: 6 (lower is better)
Translates to: MPIESSQFSVIL*RAFSRRSRVSL
Trigger: CAGTGATACCCTGGAGCGTCTGCTGAAGGCCCTGCATAAAATCACTGAGAACTGCGAGGACTCAATTGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS GCA 72 bp GATCTTCCTCAAGTTCCTGCGTCTGATAAAATCAAGTaGTTCCGGGCTGGACTTCCACACGCGCTTAGCAAC +
Preference number: 6 (lower is better)
Translates to: DLPQVPASDKIK*FRAGLPHALSN
Trigger: GTTGCTAAGCGCGTGTGGAAGTCCAGCCCGGAAGCACTTGATTTTATCAGACGCAGGAACTTGAGGAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS GCA 72 bp CAGCCACCCATTCTGGAATCGGATGATTATCAAGGCTaGATCATCCAATTGTCACTGGACCTGGTGGAGAGA +
Preference number: 6 (lower is better)
Translates to: QPPILESDDYQG*IIQLSLDLVER
Trigger: TCTCTCCACCAGGTCCAGTGACAATTGGATGATGCAGCCTTGATAATCATCCGATTCCAGAATGGGTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS CAA 72 bp CTGGAATCGGATGATTATCAAGGCTGCATCATCCAATaGTCACTGGACCTGGTGGAGAGAACTATGGGGGTG +
Preference number: 6 (lower is better)
Translates to: LESDDYQGCIIQ*SLDLVERTMGV
Trigger: CACCCCCATAGTTCTCTCCACCAGGTCCAGTGACAATTGGATGATGCAGCCTTGATAATCATCCGATTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS CAA 90 bp TGGCAGCAAGCCTCAACAACCTGGGGGATTTGTTTCGCAATCGGATaGAGACTCATCTTCCTTTTGGATCCCAGAAGTCGTTGGCCAATT +
Preference number: 6 (lower is better)
Translates to: WQQASTTWGICFAIG*RLIFLLDPRSRWPI
Trigger: AATTGGCCAACGACTTCTGGGATCCAAAAGGAAGATGAGTCTCAATCCGATTGCGAAACAAATCCCCCAGGTTGTTGAGGCTTGCTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS CAA 90 bp CACATCATGCACATTCTGATTGTCATCCAGCACTACATCCAGACCTaGATCAAATTCTTCACGGAGCTGACGCACTCGCTGCACGGAGTA +
Preference number: 6 (lower is better)
Translates to: HIMHILIVIQHYIQT*IKFFTELTHSLHGV
Trigger: TACTCCGTGCAGCGAGTGCGTCAGCTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGTGCTGGATGACAATCAGAATGTGCATGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CAA 72 bp GCCTCAACAACCTGGGGGATTTGTTTCGCAATCGGATaGAGACTCATCTTCCTTTTGGATCCCAGAAGTCGT +
Preference number: 6 (lower is better)
Translates to: ASTTWGICFAIG*RLIFLLDPRSR
Trigger: ACGACTTCTGGGATCCAAAAGGAAGATGAGTCTCAATCCGATTGCGAAACAAATCCCCCAGGTTGTTGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS CAA 72 bp CACATTCTGATTGTCATCCAGCACTACATCCAGACCTaGATCAAATTCTTCACGGAGCTGACGCACTCGCTG +
Preference number: 6 (lower is better)
Translates to: HILIVIQHYIQT*IKFFTELTHSL
Trigger: CAGCGAGTGCGTCAGCTCCGTGAAGAATTTGATCAAGGTCTGGATGTAGTGCTGGATGACAATCAGAATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS TCA 72 bp CCTCAACAACCTGGGGGATTTGTTTCGCAATCGGATTaGGACTCATCTTCCTTTTGGATCCCAGAAGTCGTT +
Preference number: 6 (lower is better)
Translates to: PQQPGGFVSQSD*DSSSFWIPEVV
Trigger: AACGACTTCTGGGATCCAAAAGGAAGATGAGTCTCAATCCGATTGCGAAACAAATCCCCCAGGTTGTTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS TCA 72 bp GGACATCCCAGTTATCAATCATGGCACGGACCACATTaGCAGAAGCAACATAGTGATCAATCCCCAGCTTTG +
Preference number: 6 (lower is better)
Translates to: GHPSYQSWHGPH*QKQHSDQSPAL
Trigger: CAAAGCTGGGGATTGATCACTATGTTGCTTCTGTCAATGTGGTCCGTGCCATGATTGATAACTGGGATGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS TCA 72 bp CAGAAAAGGAATGCAGCCACCCATTCTGGAATCGGATaGTTATCAAGGCTGCATCATCCAATTGTCACTGGA +
Preference number: 6 (lower is better)
Translates to: QKRNAATHSGIG*LSRLHHPIVTG
Trigger: TCCAGTGACAATTGGATGATGCAGCCTTGATAATCATCCGATTCCAGAATGGGTGGCTGCATTCCTTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS GCA 72 bp AGAATCCTTCATGTCACGGAAAAACTCCTTGAGGAGTaGAGCCACATCATGCACATTCTGATTGTCATCCAG +
Preference number: 6 (lower is better)
Translates to: RILHVTEKLLEE*SHIMHILIVIQ
Trigger: CTGGATGACAATCAGAATGTGCATGATGTGGCTGCACTCCTCAAGGAGTTTTTCCGTGACATGAAGGATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000639280.1
CDS CCA 72 bp TTGCTGCCTTCAGAAAAGGAATGCAGCCACCCATTCTaGAATCGGATGATTATCAAGGCTGCATCATCCAAT +
Preference number: 6 (lower is better)
Translates to: LLPSEKECSHPF*NRMIIKAASSN
Trigger: ATTGGATGATGCAGCCTTGATAATCATCCGATTCCAGAATGGGTGGCTGCATTCCTTTTCTGAAGGCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276211.10
CDS CAA 72 bp AATGAATTGGCAGCAAGCCTCAACAACCTGGGGGATTaGTTTCGCAATCGGATTGAGACTCATCTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: NELAASLNNLGD*FRNRIETHLPF
Trigger: AAAAGGAAGATGAGTCTCAATCCGATTGCGAAACAAATCCCCCAGGTTGTTGAGGCTTGCTGCCAATTCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS CAA 90 bp ACCTGGGGGATTTGTTTCGCAATCGGATTGAGACTCATCTTCCTTTaGGATCCCAGAAGTCGTTGGCCAATTGGAAAGGAAATTTTTGAA +
Preference number: 6 (lower is better)
Translates to: TWGICFAIGLRLIFL*DPRSRWPIGKEIFE
Trigger: TTCAAAAATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCCAAAAGGAAGATGAGTCTCAATCCGATTGCGAAACAAATCCCCCAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1
CDS CCA 72 bp TTGAGACTCATCTTCCTTTTGGATCCCAGAAGTCGTTaGCCAATTGGAAAGGAAATTTTTGAAAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: LRLIFLLDPRSR*PIGKEIFESCR
Trigger: CCTGCAGCTTTCAAAAATTTCCTTTCCAATTGGCCAACGACTTCTGGGATCCAAAAGGAAGATGAGTCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000276211.10
ENST00000370921.1
ENST00000370922.5
ENST00000412432.6
ENST00000423277.5
ENST00000639280.1