Pregenerated sensors for AREG (Homo sapiens)
Ensembl gene IDs: ENSG00000109321Ensembl transcript IDs: ENST00000395748.8, ENST00000502307.1, ENST00000511560.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCTATaGCTTGGCAGTGACTCCAATGTGATATCCTGTAATTTTATCTTC | + |
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Preference number: 1 (lower is better) Translates to: SYDPLERGPTHHLWL*LGSDSNVISCNFIF Trigger: GAAGATAAAATTACAGGATATCACATTGGAGTCACTGCCAAGTCATAGCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| 3UTR CCA 90 bp | TTTAAAACCATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTaGAAAGAGGACCGACTCATCATTTATGGCTATGACTTGGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: FKTIITKRVHCLMIH*KEDRLIIYGYDLAV Trigger: CACTGCCAAGTCATAGCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGATGGTTTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| 3UTR-3UTR TCA 90 bp | ATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCGCAGTGACTCCAATGTaGTATCCTGTAATTTTATCT | + |
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Preference number: 2 (lower is better) Translates to: ITKRVHCLMIHWKEDRLIAVTPM*YPVILS Trigger: AGATAAAATTACAGGATATCACATTGGAGTCACTGC...GATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| 3UTR TCA 72 bp | CCACTGGAAAGAGGACCGACTCATCATTTATGGCTATaGCTTGGCAGTGACTCCAATGTGATATCCTGTAAT | + |
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Preference number: 3 (lower is better) Translates to: PLERGPTHHLWL*LGSDSNVISCN Trigger: ATTACAGGATATCACATTGGAGTCACTGCCAAGTCATAGCCATAAATGATGAGTCGGTCCTCTTTCCAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| 3UTR CCA 72 bp | ATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTaGAAAGAGGACCGACTCATCATTTATGGCTATGAC | + |
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Preference number: 3 (lower is better) Translates to: IITKRVHCLMIH*KEDRLIIYGYD Trigger: GTCATAGCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CCA 90 bp | ATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCTATGACTTGGCAGTGGGACCTCTGGGGCGCTaGCACCCAGGTGTGCGAACG | + |
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Preference number: 4 (lower is better) Translates to: MIHWKEDRLIIYGYDLAVGPLGR*HPGVRT Trigger: CGTTCGCACACCTGGGTGCCAGCGCCCCAGAGGTCC...CACTGCCAAGTCATAGCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CCA 90 bp | ATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCCCGCTCTCGAAGGCTTaGGGAGCTCGGGGCGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: ITKRVHCLMIHWKEDRLIPLSKA*GARGGG Trigger: CCCGCCGCCCCGAGCTCCCCAAGCCTTCGAGAGCGG...GATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CCA 90 bp | CATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCTATGACCTGTCCCGGGACCTCTaGGGCGCTGGCACCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: HCLMIHWKEDRLIIYGYDLSRDL*GAGTQV Trigger: CACCTGGGTGCCAGCGCCCCAGAGGTCCCGGGACAG...GTCATAGCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CCA 90 bp | ACCATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACAGCGGGGCTCTCATTaGTCCTTCGCAGCGGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: TIITKRVHCLMIHWKEDRQRGSH*SFAAAA Trigger: CGCCGCCGCTGCGAAGGACCAATGAGAGCCCCGCTG...TCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CCA 90 bp | CATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCGGCGTCTCGGTCTCTaGGGCAACTCGGTCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: HHNKKGPLSYDPLERGPTRRLGL*GNSVSG Trigger: CCCAGAGACCGAGTTGCCCCAGAGACCGAGACGCCG...AGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR GCA 90 bp | ACCATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGATGGAGACCGGGAGTGTaGGCCGCTCTCGAAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: TIITKRVHCLMIHWKEDRWRPGV*AALEGL Trigger: CAAGCCTTCGAGAGCGGCGCACACTCCCGGTCTCCA...TCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGATGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CCA 90 bp | GGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCTATGTTGGAAGAGCGAGTaGAGACCGGGAGTGTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: GPLSYDPLERGPTHHLWLCWKSE*RPGVCA Trigger: GGCGCACACTCCCGGTCTCCACTCGCTCTTCCAACA...TAGCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CCA 90 bp | CATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTGGGCAACTCGGTCTCTaGGACACGAGCTGCCGCCAA | + |
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Preference number: 4 (lower is better) Translates to: HHNKKGPLSYDPLERGPTGQLGL*DTSCRQ Trigger: TTGGCGGCAGCTCGTGTCCCAGAGACCGAGTTGCCC...AGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR GCA 90 bp | AAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATCTCTGGGACACGAGCTaGCGCCAAAACGAGCGGGTG | + |
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Preference number: 4 (lower is better) Translates to: KRVHCLMIHWKEDRLIIYLWDTS*RQNERV Trigger: CACCCGCTCGTTTTGGCGGCAGCTCGTGTCCCAGAG...ATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CCA 90 bp | ATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCAAAACGAGCGGGTGTTaGAAGAGCGAGTGGAGACCG | + |
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Preference number: 4 (lower is better) Translates to: IITKRVHCLMIHWKEDRLKTSGC*KSEWRP Trigger: CGGTCTCCACTCGCTCTTCCAACACCCGCTCGTTTT...GAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR TCA 90 bp | AAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCAGAGTAGGTGTCATTaGGGTCCAATCCAGCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: KGPLSYDPLERGPTHHLWQSRCH*GPIQQH Trigger: ATGCTGCTGGATTGGACCTCAATGACACCTACTCTG...CCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CCA 90 bp | GGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCTAGTGGTCCCCAGAAAATaGTTCACGCTTCCCAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: GPLSYDPLERGPTHHLWLVVPRK*FTLPRV Trigger: TACTCTGGGAAGCGTGAACCATTTTCTGGGGACCAC...TAGCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR TCA 90 bp | ACCATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGAGGGTCCATTGTCTTATaGTCCACTGGAAAGAGGACC | + |
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Preference number: 4 (lower is better) Translates to: TIITKRVHCLMIHWKEDRGSIVL*STGKRT Trigger: GGTCCTCTTTCCAGTGGATCATAAGACAATGGACCC...TCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR TCA 90 bp | AGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCCTGTTCAACTCTGACTaGATCATCGACAATATAGCC | + |
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Preference number: 4 (lower is better) Translates to: RVHCLMIHWKEDRLIIYGLFNSD*IIDNIA Trigger: GGCTATATTGTCGATGATTCAGTCAGAGTTGAACAG...GCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR TCA 90 bp | ACCATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGAGCTATGACTTGGCAGTaGCTCCAATGTGATATCCTG | + |
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Preference number: 4 (lower is better) Translates to: TIITKRVHCLMIHWKEDRAMTWQ*LQCDIL Trigger: CAGGATATCACATTGGAGTCACTGCCAAGTCATAGC...TCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGATGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR TCA 90 bp | AGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCCATCATTTATGGCTATaGCTTGGCAGTGACTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: RVHCLMIHWKEDRLIIYGHHLWL*LGSDSN Trigger: ATTGGAGTCACTGCCAAGTCATAGCCATAAATGATG...GCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CCA 90 bp | GGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCTATGTCTTATGATCCACTaGAAAGAGGACCGACTCATC | + |
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Preference number: 4 (lower is better) Translates to: GPLSYDPLERGPTHHLWLCLMIH*KEDRLI Trigger: GATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACA...TAGCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR TCA 90 bp | ATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCGTTATCATACTCTTCTaGGTAGTCATAGTCGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: IITKRVHCLMIHWKEDRLVIILF*VVIVGS Trigger: GGAGCCGACTATGACTACTCAGAAGAGTATGATAAC...GAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR TCA 90 bp | GGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCTACTGTCAATCATGCTGTaGGTTTTCATGGACTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GPLSYDPLERGPTHHLWLLSIML*VFMDFS Trigger: GGAAAAGTCCATGAAAACTCACAGCATGATTGACAG...TAGCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR TCA 90 bp | TGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCTATGACTTGAGACATCTCACTTCTTaGGGTAACCTCAAATCCATC | + |
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Preference number: 4 (lower is better) Translates to: CLMIHWKEDRLIIYGYDLRHLTS*GNLKSI Trigger: GATGGATTTGAGGTTACCTCAAGAAGTGAGATGTCT...CAAGTCATAGCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR GCA 90 bp | AGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCACATTTGCATGTTACTaGTTCCAGGTGCTCTATATA | + |
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Preference number: 4 (lower is better) Translates to: RVHCLMIHWKEDRLIIYGTFACY*FQVLYI Trigger: TATATAGAGCACCTGGAAGCAGTAACATGCAAATGT...GCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CCA 90 bp | AAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATAATCCATCAGCACTGTaGTCCCCAGAAAATGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: KRVHCLMIHWKEDRLIIYNPSAL*SPENGS Trigger: TGAACCATTTTCTGGGGACCACAGTGCTGATGGATT...ATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR TCA 90 bp | AAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGGCAGTGACTCCAATGTaGTATCCTGTAATTTTATCT | + |
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Preference number: 4 (lower is better) Translates to: KGPLSYDPLERGPTHHLWAVTPM*YPVILS Trigger: AGATAAAATTACAGGATATCACATTGGAGTCACTGC...CCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR GCA 90 bp | ACCATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGAGGTGCTCTATATATTTaGATTCTCCGTGAATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TIITKRVHCLMIHWKEDRGALYI*ILRECR Trigger: TCTGCATTCACGGAGAATGCAAATATATAGAGCACC...TCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGATGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR GCA 90 bp | ATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTCTTGCTGACATTTaGATGTTACTGCTTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: ITKRVHCLMIHWKEDRLIILADI*MLLLPG Trigger: ACCTGGAAGCAGTAACATGCAAATGTCAGCAAGAAT...GATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR GCA 90 bp | AAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGAACTACTGTCAATCATaGTGTGAGTTTTCATGGACT | + |
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Preference number: 4 (lower is better) Translates to: KGPLSYDPLERGPTHHLWNYCQS*CEFSWT Trigger: AGTCCATGAAAACTCACAGCATGATTGACAGTAGTT...CCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR TCA 90 bp | AAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTACTACCTGTTCAACTCTaGCTGAATCATCGACAATAT | + |
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Preference number: 4 (lower is better) Translates to: KKGPLSYDPLERGPTHHLLPVQL*LNHRQY Trigger: ATATTGTCGATGATTCAGTCAGAGTTGAACAGGTAG...TAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR GCA 90 bp | ACCATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGAGTTACTGCTTCCAGGTaGTCTATATATTTGCATTCT | + |
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Preference number: 4 (lower is better) Translates to: TIITKRVHCLMIHWKEDRVTASR*SIYLHS Trigger: AGAATGCAAATATATAGAGCACCTGGAAGCAGTAAC...TCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGATGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CCA 90 bp | ATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATAGCCAGGTATTTGTaGTTCGTTATCATACTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ITKRVHCLMIHWKEDRLIIARYL*FVIILF Trigger: GAAGAGTATGATAACGAACCACAAATACCTGGCTAT...GATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CCA 90 bp | CATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTTATTGTCTTCTAAGCTaGACTGTAATAACAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: HHNKKGPLSYDPLERGPTYCLLS*TVITAT Trigger: TGTTGCTGTTATTACAGTCCAGCTTAGAAGACAATA...AGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS GCA 90 bp | GCGGCGTCTCGGTCTCTGGGGCAACTCGGTCTCTGGGACACGAGCTaGCGCCAAAACGAGCGGGTGTTGGAAGAGCGAGTGGAGACCGGG | + |
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Preference number: 5 (lower is better) Translates to: AASRSLGQLGLWDTS*RQNERVLEERVETG Trigger: CCCGGTCTCCACTCGCTCTTCCAACACCCGCTCGTTTTGGCGGCAGCTCGTGTCCCAGAGACCGAGTTGCCCCAGAGACCGAGACGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS CCA 90 bp | GGGACACGAGCTGCCGCCAAAACGAGCGGGTGTTGGAAGAGCGAGTaGAGACCGGGAGTGTGCGCCGCTCTCGAAGGCTTGGGGAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: GTRAAAKTSGCWKSE*RPGVCAALEGLGSS Trigger: CGAGCTCCCCAAGCCTTCGAGAGCGGCGCACACTCCCGGTCTCCACTCGCTCTTCCAACACCCGCTCGTTTTGGCGGCAGCTCGTGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS CCA 90 bp | AGCGGGGCTCTCATTGGTCCTTCGCAGCGGCGGCGTCTCGGTCTCTaGGGCAACTCGGTCTCTGGGACACGAGCTGCCGCCAAAACGAGC | + |
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Preference number: 5 (lower is better) Translates to: SGALIGPSQRRRLGL*GNSVSGTRAAAKTS Trigger: GCTCGTTTTGGCGGCAGCTCGTGTCCCAGAGACCGAGTTGCCCCAGAGACCGAGACGCCGCCGCTGCGAAGGACCAATGAGAGCCCCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS CCA 90 bp | TCCTTCGCAGCGGCGGCGTCTCGGTCTCTGGGGCAACTCGGTCTCTaGGACACGAGCTGCCGCCAAAACGAGCGGGTGTTGGAAGAGCGA | + |
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Preference number: 5 (lower is better) Translates to: SFAAAASRSLGQLGL*DTSCRQNERVLEER Trigger: TCGCTCTTCCAACACCCGCTCGTTTTGGCGGCAGCTCGTGTCCCAGAGACCGAGTTGCCCCAGAGACCGAGACGCCGCCGCTGCGAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS CCA 90 bp | AACTCGGTCTCTGGGACACGAGCTGCCGCCAAAACGAGCGGGTGTTaGAAGAGCGAGTGGAGACCGGGAGTGTGCGCCGCTCTCGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: NSVSGTRAAAKTSGC*KSEWRPGVCAALEG Trigger: GCCTTCGAGAGCGGCGCACACTCCCGGTCTCCACTCGCTCTTCCAACACCCGCTCGTTTTGGCGGCAGCTCGTGTCCCAGAGACCGAGTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CAA 90 bp | ATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCGCCGCTCTCGAAGGCTaGGGGAGCTCGGGGCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: IITKRVHCLMIHWKEDRLAALEG*GSSGRR Trigger: CCGCCGCCCCGAGCTCCCCAAGCCTTCGAGAGCGGC...GAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CAA 90 bp | GGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCTAGCAGCGGGGCTCTCATaGGTCCTTCGCAGCGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: GPLSYDPLERGPTHHLWLAAGLS*VLRSGG Trigger: GCCGCCGCTGCGAAGGACCAATGAGAGCCCCGCTGC...TAGCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS TCA 90 bp | TGTGGTCCCCAGAAAATGGTTCACGCTTCCCAGAGTAGGTGTCATTaGGGTCCAATCCAGCAGCATAATGGCCTGAGCCGAGTATCAAGA | + |
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Preference number: 5 (lower is better) Translates to: CGPQKMVHASQSRCH*GPIQQHNGLSRVSR Trigger: TCTTGATACTCGGCTCAGGCCATTATGCTGCTGGATTGGACCTCAATGACACCTACTCTGGGAAGCGTGAACCATTTTCTGGGGACCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000395748.8 ENST00000502307.1 |
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| CDS-3UTR CAA 90 bp | AGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGCCAAAACGAGCGGGTGTaGGAAGAGCGAGTGGAGACC | + |
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Preference number: 5 (lower is better) Translates to: RVHCLMIHWKEDRLIIYGQNERV*EERVET Trigger: GGTCTCCACTCGCTCTTCCAACACCCGCTCGTTTTG...GCCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS TCA 90 bp | ATCGACAATATAGCCAGGTATTTGTGGTTCGTTATCATACTCTTCTaGGTAGTCATAGTCGGCTCCCGAGGACGGTTCACTACTAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: IDNIARYLWFVIILF*VVIVGSRGRFTTRR Trigger: CCTTCTAGTAGTGAACCGTCCTCGGGAGCCGACTATGACTACTCAGAAGAGTATGATAACGAACCACAAATACCTGGCTATATTGTCGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000395748.8 ENST00000502307.1 |
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| CDS-3UTR CAA 90 bp | AAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATGGATATTTCCTGACGTATaGTCTTCTAAGCTGGACTGT | + |
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Preference number: 5 (lower is better) Translates to: KGPLSYDPLERGPTHHLWIFPDV*SSKLDC Trigger: ACAGTCCAGCTTAGAAGACAATACGTCAGGAAATAT...CCATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CAA 90 bp | ACCATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGAAACAAAAAGGGTCCATaGTCTTATGATCCACTGGAA | + |
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Preference number: 5 (lower is better) Translates to: TIITKRVHCLMIHWKEDRNKKGP*SYDPLE Trigger: TTCCAGTGGATCATAAGACAATGGACCCTTTTTGTT...TCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGATGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CAA 90 bp | ATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCAATATAGCCAGGTATTaGTGGTTCGTTATCATACTC | + |
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Preference number: 5 (lower is better) Translates to: ITKRVHCLMIHWKEDRLINIARY*WFVIIL Trigger: GAGTATGATAACGAACCACAAATACCTGGCTATATT...GATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CAA 90 bp | ATCATAACAAAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCTACATTTCCATTCTCTaGTCGAAGTTTCTTTCGTTC | + |
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Preference number: 5 (lower is better) Translates to: IITKRVHCLMIHWKEDRLYISIL*SKFLSF Trigger: GAACGAAAGAAACTTCGACAAGAGAATGGAAATGTA...GAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTTTGTTATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS-3UTR CAA 90 bp | AAAAGGGTCCATTGTCTTATGATCCACTGGAAAGAGGACCGACTCATCATTTATTTCACCGAAATATTCTaGCTGACATTTGCATGTTAC | + |
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Preference number: 5 (lower is better) Translates to: KRVHCLMIHWKEDRLIIYFTEIF*LTFACY Trigger: GTAACATGCAAATGTCAGCAAGAATATTTCGGTGAA...ATAAATGATGAGTCGGTCCTCTTTCCAGTGGATCATAAGACAATGGACCCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS CAA 72 bp | GCACCACCGGCGCCGGCGGTAGCAGCGGGGCTCTCATaGGTCCTTCGCAGCGGCGGCGTCTCGGTCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: APPAPAVAAGLS*VLRSGGVSVSG Trigger: CCCAGAGACCGAGACGCCGCCGCTGCGAAGGACCAATGAGAGCCCCGCTGCTACCGCCGGCGCCGGTGGTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395748.8 ENST00000502307.1 |
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| CDS CAA 90 bp | AGAGCGACAGCACCACCGGCGCCGGCGGTAGCAGCGGGGCTCTCATaGGTCCTTCGCAGCGGCGGCGTCTCGGTCTCTGGGGCAACTCGG | + |
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Preference number: 6 (lower is better) Translates to: RATAPPAPAVAAGLS*VLRSGGVSVSGATR Trigger: CCGAGTTGCCCCAGAGACCGAGACGCCGCCGCTGCGAAGGACCAATGAGAGCCCCGCTGCTACCGCCGGCGCCGGTGGTGCTGTCGCTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000395748.8 ENST00000502307.1 |
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| CDS CCA 72 bp | GCGGCGGCGTCTCGGTCTCTGGGGCAACTCGGTCTCTaGGACACGAGCTGCCGCCAAAACGAGCGGGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: AAASRSLGQLGL*DTSCRQNERVL Trigger: CAACACCCGCTCGTTTTGGCGGCAGCTCGTGTCCCAGAGACCGAGTTGCCCCAGAGACCGAGACGCCGCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS CCA 72 bp | CTCATTGGTCCTTCGCAGCGGCGGCGTCTCGGTCTCTaGGGCAACTCGGTCTCTGGGACACGAGCTGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: LIGPSQRRRLGL*GNSVSGTRAAA Trigger: GGCGGCAGCTCGTGTCCCAGAGACCGAGTTGCCCCAGAGACCGAGACGCCGCCGCTGCGAAGGACCAATGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS CAA 72 bp | CTCTGGGACACGAGCTGCCGCCAAAACGAGCGGGTGTaGGAAGAGCGAGTGGAGACCGGGAGTGTGCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LWDTSCRQNERV*EERVETGSVRR Trigger: GCGGCGCACACTCCCGGTCTCCACTCGCTCTTCCAACACCCGCTCGTTTTGGCGGCAGCTCGTGTCCCAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS CCA 72 bp | GCTGCCGCCAAAACGAGCGGGTGTTGGAAGAGCGAGTaGAGACCGGGAGTGTGCGCCGCTCTCGAAGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: AAAKTSGCWKSE*RPGVCAALEGL Trigger: CAAGCCTTCGAGAGCGGCGCACACTCCCGGTCTCCACTCGCTCTTCCAACACCCGCTCGTTTTGGCGGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS CCA 72 bp | TCTGGGACACGAGCTGCCGCCAAAACGAGCGGGTGTTaGAAGAGCGAGTGGAGACCGGGAGTGTGCGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: SGTRAAAKTSGC*KSEWRPGVCAA Trigger: AGCGGCGCACACTCCCGGTCTCCACTCGCTCTTCCAACACCCGCTCGTTTTGGCGGCAGCTCGTGTCCCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS CAA 90 bp | CAACTCGGTCTCTGGGACACGAGCTGCCGCCAAAACGAGCGGGTGTaGGAAGAGCGAGTGGAGACCGGGAGTGTGCGCCGCTCTCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: QLGLWDTSCRQNERV*EERVETGSVRRSRR Trigger: CCTTCGAGAGCGGCGCACACTCCCGGTCTCCACTCGCTCTTCCAACACCCGCTCGTTTTGGCGGCAGCTCGTGTCCCAGAGACCGAGTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS GCA 72 bp | CGGTCTCTGGGGCAACTCGGTCTCTGGGACACGAGCTaGCGCCAAAACGAGCGGGTGTTGGAAGAGCGAGTG | + |
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Preference number: 6 (lower is better) Translates to: RSLGQLGLWDTS*RQNERVLEERV Trigger: CACTCGCTCTTCCAACACCCGCTCGTTTTGGCGGCAGCTCGTGTCCCAGAGACCGAGTTGCCCCAGAGACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS TCA 72 bp | CAGAAAATGGTTCACGCTTCCCAGAGTAGGTGTCATTaGGGTCCAATCCAGCAGCATAATGGCCTGAGCCGA | + |
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Preference number: 6 (lower is better) Translates to: QKMVHASQSRCH*GPIQQHNGLSR Trigger: TCGGCTCAGGCCATTATGCTGCTGGATTGGACCTCAATGACACCTACTCTGGGAAGCGTGAACCATTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000395748.8 ENST00000502307.1 |
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| CDS CCA 72 bp | AACCTCAAATCCATCAGCACTGTGGTCCCCAGAAAATaGTTCACGCTTCCCAGAGTAGGTGTCATTGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: NLKSISTVVPRK*FTLPRVGVIEV Trigger: GACCTCAATGACACCTACTCTGGGAAGCGTGAACCATTTTCTGGGGACCACAGTGCTGATGGATTTGAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000395748.8 ENST00000502307.1 |
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| CDS TCA 72 bp | ATAGCCAGGTATTTGTGGTTCGTTATCATACTCTTCTaGGTAGTCATAGTCGGCTCCCGAGGACGGTTCACT | + |
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Preference number: 6 (lower is better) Translates to: IARYLWFVIILF*VVIVGSRGRFT Trigger: AGTGAACCGTCCTCGGGAGCCGACTATGACTACTCAGAAGAGTATGATAACGAACCACAAATACCTGGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000395748.8 ENST00000502307.1 |
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| CDS TCA 72 bp | CCACTGGAAAGAGGACCGACTCATCATTTATGGCTATaGCTTGGCAGTGACTCCAATGTGATATCTGGACTG | + |
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Preference number: 6 (lower is better) Translates to: PLERGPTHHLWL*LGSDSNVISGL Trigger: CAGTCCAGATATCACATTGGAGTCACTGCCAAGTCATAGCCATAAATGATGAGTCGGTCCTCTTTCCAGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502307.1 |
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| CDS TCA 72 bp | AGGACCGACTCATCATTTATGGCTATGACTTGGCAGTaGCTCCAATGTGATATCTGGACTGTAATAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: RTDSSFMAMTWQ*LQCDIWTVITA Trigger: TGCTGTTATTACAGTCCAGATATCACATTGGAGTCACTGCCAAGTCATAGCCATAAATGATGAGTCGGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502307.1 |
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| CDS CAA 72 bp | TCGTTCCTCAGCTTCTCCTTCATATTTCCTGACGTATaGTCTTCTAAGCTGGACTGTAATAACAGCAACAGC | + |
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Preference number: 6 (lower is better) Translates to: SFLSFSFIFPDV*SSKLDCNNSNS Trigger: GCTGTTGCTGTTATTACAGTCCAGCTTAGAAGACAATACGTCAGGAAATATGAAGGAGAAGCTGAGGAACGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS CAA 72 bp | CTTCAGTTATGCTATAGCATGTACATTTCCATTCTCTaGTCGAAGTTTCTTTCGTTCCTCAGCTTCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LQLCYSMYISIL*SKFLSFLSFSF Trigger: GAAGGAGAAGCTGAGGAACGAAAGAAACTTCGACAAGAGAATGGAAATGTACATGCTATAGCATAACTGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395748.8 |
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| CDS GCA 72 bp | ATTTGCATGTTACTGCTTCCAGGTGCTCTATATATTTaGATTCTCCGTGAATGCAGAAATTTTGAAATTCTG | + |
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Preference number: 6 (lower is better) Translates to: ICMLLLPGALYI*ILRECRNFEIL Trigger: CAGAATTTCAAAATTTCTGCATTCACGGAGAATGCAAATATATAGAGCACCTGGAAGCAGTAACATGCAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000395748.8 ENST00000502307.1 ENST00000511560.1 |
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