RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AQP6 (Homo sapiens)

Ensembl gene IDs: ENSG00000086159

Ensembl transcript IDs: ENST00000315520.10, ENST00000489786.5, ENST00000551733.5, ENST00000615425.1, ENST00000618286.1

Found 300 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCTGTCTGGGCTCCCATTCCTTTCTCCCCCAAGACTTGGGCATCTaGGGTCAGGACTCCTACGGGGTCCAGTGGGTGAGAGGATGGGAG +
Preference number: 1 (lower is better)
Translates to: GCLGSHSFLPQDLGI*GQDSYGVQWVRGWE
Trigger: CTCCCATCCTCTCACCCACTGGACCCCGTAGGAGTCCTGACCCCAGATGCCCAAGTCTTGGGGGAGAAAGGAATGGGAGCCCAGACAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CCA 90 bp CCTGATTCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCTaGGTGGGTAAGAAGCTGGGGCTCCCTGAGGTCCCTATAGCTCCC +
Preference number: 1 (lower is better)
Translates to: PDSSRKPVLSGPRVS*VGKKLGLPEVPIAP
Trigger: GGGAGCTATAGGGACCTCAGGGAGCCCCAGCTTCTTACCCACCCAGGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGAATCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR TCA 90 bp CAGTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTaGGGAATAAAGACCTATTGGGAGAGGCCGGGCACGGTGGCTCAC +
Preference number: 1 (lower is better)
Translates to: QFFSRVGASPEHLED*GIKTYWERPGTVAH
Trigger: GTGAGCCACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CCA 90 bp ACAGAGAGCCTGGAGACGGCTTCTTTGACCCAGGTCATGAGTCAATaGCTAGATGGGCACTTCCCCTCTGAGGATTGTTCCTGCCTGAGA +
Preference number: 1 (lower is better)
Translates to: TESLETASLTQVMSQ*LDGHFPSEDCSCLR
Trigger: TCTCAGGCAGGAACAATCCTCAGAGGGGAAGTGCCCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAGGCTCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CCA 90 bp CCCTCCTGGGTTCCTACCACCCTTAGGGCTTATTCAACAGCTTTCTaGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTT +
Preference number: 1 (lower is better)
Translates to: PSWVPTTLRAYSTAF*GSCNADREPGDGFF
Trigger: AAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGTAGGAACCCAGGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CCA 90 bp TTTCACAGCAGTCCCTGGAGGAGGATTGTGTGTCCATTTTACAGCTaGAGAAGCCGAGATCCAGAAAGGACCCCCAAGTTGTGGGCAGAA +
Preference number: 1 (lower is better)
Translates to: FHSSPWRRIVCPFYS*RSRDPERTPKLWAE
Trigger: TTCTGCCCACAACTTGGGGGTCCTTTCTGGATCTCGGCTTCTCCAGCTGTAAAATGGACACACAATCCTCCTCCAGGGACTGCTGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR TCA 90 bp TCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCTGGGTGGGTAAGAAGACGGGGTCCAGTGGGTaGGAGGATGGGAGGGCGATC +
Preference number: 2 (lower is better)
Translates to: SSRKPVLSGPRVSWVGKKTGSSG*EDGRAI
Trigger: GATCGCCCTCCCATCCTCTCACCCACTGGACCCCGT...CTTCTTACCCACCCAGGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR TCA 90 bp TCTGTGTCAGTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTGACGGGGTCCAGTGGGTaGGAGGATGGGAGGGCGATC +
Preference number: 2 (lower is better)
Translates to: SVSVLLKGGGLSRAFGGLTGSSG*EDGRAI
Trigger: GATCGCCCTCCCATCCTCTCACCCACTGGACCCCGT...CAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAACTGACACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp CAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTCTGTGGGGTGGGAGCTaGGGCAAGCACCTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: QQLSGDPVMLTESLETASLWGGS*GKHLGG
Trigger: TCCTCCCAGGTGCTTGCCCCAGCTCCCACCCCACAG...AGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR TCA 90 bp AGCCTGGAGACGGCTTCTTTGACCCAGGTCATGAGTCAATGGCTAGATGGGCACGGCTGTCCCAGGGCCTaGTTCCTCCAGAAAGCCTGT +
Preference number: 2 (lower is better)
Translates to: SLETASLTQVMSQWLDGHGCPRA*FLQKAC
Trigger: ACAGGCTTTCTGGAGGAATCAGGCCCTGGGACAGCC...GTGCCCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp CACCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCAGCCCCTCCAGCCCACCTaGTCAGGACAAAAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: HREVGKPYREGMGQIHSQPLQPT*SGQKVK
Trigger: CTTGACCTTTTGTCCTGACCAGGTGGGCTGGAGGGG...CTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000315520.10
3UTR-3UTR TCA 90 bp CTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGACCAGGATTGTTCCTGCCTaGGAGTGGGCTGTGGGGTGG +
Preference number: 2 (lower is better)
Translates to: LSGDPVMLTESLETASLTRIVPA*EWAVGW
Trigger: CCACCCCACAGCCCACTCTCAGGCAGGAACAATCCT...GGTCAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp CAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGTGTCCCACCGAGAGGTaGGGAAGCCCTACAGAGAGG +
Preference number: 2 (lower is better)
Translates to: QLSGDPVMLTESLETASLCPTER*GSPTER
Trigger: CCTCTCTGTAGGGCTTCCCCACCTCTCGGTGGGACA...CAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp AGCCTGGAGACGGCTTCTTTGACCCAGGTCATGAGTCAATGGCTAGATGGGCACCAAGGGTTTCCTGGGTaGGTAAGAAGCTGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: SLETASLTQVMSQWLDGHQGFPG*VRSWGS
Trigger: GGAGCCCCAGCTTCTTACCCACCCAGGAAACCCTTG...GTGCCCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CAA 90 bp TCAGTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATaGAGGAATAAAGACCTATTGGGAGAGGCCGGGCACGGTGGCTCA +
Preference number: 2 (lower is better)
Translates to: SVLLKGGGLSRAFGG*RNKDLLGEAGHGGS
Trigger: TGAGCCACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAACTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR TCA 90 bp GGGGGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGGCTGTCCCAGGGCCTaGTTCCTCCAGAAAGCCTGT +
Preference number: 2 (lower is better)
Translates to: GGLSRAFGGLRNKDLLGEGCPRA*FLQKAC
Trigger: ACAGGCTTTCTGGAGGAATCAGGCCCTGGGACAGCC...CTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR TCA 90 bp CAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGTGGGCACTTCCCCTCTaGGGATTGTTCCTGCCTGAG +
Preference number: 2 (lower is better)
Translates to: QLSGDPVMLTESLETASLWALPL*GLFLPE
Trigger: CTCAGGCAGGAACAATCCTCAGAGGGGAAGTGCCCA...CAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR GCA 90 bp GCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGCCGGGCACGGTGGCCCAGGAGGTAGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: AFGGLRNKDLLGEAGHGGPGGRG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCTACCTCCTGG...GCCACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp TCTGTGTCAGTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTGCAAGACTTGGGCATCTaGGGTCAGGACTCCTACGGG +
Preference number: 2 (lower is better)
Translates to: SVSVLLKGGGLSRAFGGLQDLGI*GQDSYG
Trigger: CCCGTAGGAGTCCTGACCCCAGATGCCCAAGTCTTG...CAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAACTGACACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp GGCACTGAATCTCAAATCTTAGTTTCCTGGGTCCCTCCTGGGTTCCTACCACCCGGACCAAGGGTTTCCTaGGTGGGTAAGAAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GTESQILVSWVPPGFLPPGPRVS*VGKKLG
Trigger: CCCCAGCTTCTTACCCACCCAGGAAACCCTTGGTCC...GGGTGGTAGGAACCCAGGAGGGACCCAGGAAACTAAGATTTGAGATTCAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp TCCATTTTACAGCTGGAGAAGCCGAGATCCAGAAAGGACCCCCAAGTTGTGGGCGGACCAAGGGTTTCCTaGGTGGGTAAGAAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: SILQLEKPRSRKDPQVVGGPRVS*VGKKLG
Trigger: CCCCAGCTTCTTACCCACCCAGGAAACCCTTGGTCC...GCCCACAACTTGGGGGTCCTTTCTGGATCTCGGCTTCTCCAGCTGTAAAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CAA 90 bp TCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTaGACCCAGGTCATGAGTCAATGGCTAGATGGGCACTTCCCCTCT +
Preference number: 2 (lower is better)
Translates to: SGDPVMLTESLETAS*TQVMSQWLDGHFPS
Trigger: AGAGGGGAAGTGCCCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR TCA 90 bp TCCATTTTACAGCTGGAGAAGCCGAGATCCAGAAAGGACCCCCAAGTTGTGGGCGGCAGGAGAATCCCTTaGACCCAGGAGGTAGAGGTT +
Preference number: 2 (lower is better)
Translates to: SILQLEKPRSRKDPQVVGGRRIP*TQEVEV
Trigger: AACCTCTACCTCCTGGGTTCAAGGGATTCTCCTGCC...GCCCACAACTTGGGGGTCCTTTCTGGATCTCGGCTTCTCCAGCTGTAAAATGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR GCA 90 bp TCTGTGTCAGTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTGCCAGGAGGTAGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 2 (lower is better)
Translates to: SVSVLLKGGGLSRAFGGLPGGRG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCTACCTCCTGG...CAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAACTGACACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp GTTCCTACCACCCTTAGGGCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTTCCTACGGGGTCCAGTaGGTGAGAGGATGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: VPTTLRAYSTAFWGSCNASYGVQ*VRGWEG
Trigger: GCCCTCCCATCCTCTCACCCACTGGACCCCGTAGGA...AGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGTAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp TCTGAAGGAGGAAATATAGCCCCCAAAACCACACCCAAGGTCAGAGAAACACCCGGGTGGGTAAGAAGCTaGGGCTCCCTGAGGTCCCTA +
Preference number: 2 (lower is better)
Translates to: SEGGNIAPKTTPKVRETPGWVRS*GSLRSL
Trigger: TAGGGACCTCAGGGAGCCCCAGCTTCTTACCCACCC...GGGTGTTTCTCTGACCTTGGGTGTGGTTTTGGGGGCTATATTTCCTCCTTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp CTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGACCTGGGAAAGGCCTGTCTaGCTCAAACCTCCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: LSGDPVMLTESLETASLTWERPV*LKPPFL
Trigger: GAGGAAGGGAGGTTTGAGCCAGACAGGCCTTTCCCA...GGTCAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp GTTCCTACCACCCTTAGGGCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGGGAGGAGGCTTCCCTaGGAAAGGCCTGTCTGGCTC +
Preference number: 2 (lower is better)
Translates to: VPTTLRAYSTAFWGSCNAGRRLP*ERPVWL
Trigger: GAGCCAGACAGGCCTTTCCCAGGGAAGCCTCCTCCC...AGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGTAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR TCA 90 bp GGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGCCAGGAAGCCCCCAGTCTaGAGGAGGAAATATAGCCCC +
Preference number: 2 (lower is better)
Translates to: GLSRAFGGLRNKDLLGEARKPPV*RRKYSP
Trigger: GGGGCTATATTTCCTCCTTCAGACTGGGGGCTTCCT...GGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp GTTCCTACCACCCTTAGGGCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTTGTCCCACCGAGAGGTaGGGAAGCCCTACAGAGAGG +
Preference number: 2 (lower is better)
Translates to: VPTTLRAYSTAFWGSCNACPTER*GSPTER
Trigger: CCTCTCTGTAGGGCTTCCCCACCTCTCGGTGGGACA...AGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGTAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp ACCACCCTTAGGGCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGGGTGGGTAAGAAGCTaGGGCTCCCTGAGGTCCCTA +
Preference number: 2 (lower is better)
Translates to: TTLRAYSTAFWGSCNADRGWVRS*GSLRSL
Trigger: TAGGGACCTCAGGGAGCCCCAGCTTCTTACCCACCC...TCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR TCA 90 bp CAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGCTCAGGTCAGGAGTTTaGGACCACCCTGACCAATAT +
Preference number: 2 (lower is better)
Translates to: QLSGDPVMLTESLETASLLRSGV*DHPDQY
Trigger: ATATTGGTCAGGGTGGTCTCAAACTCCTGACCTGAG...CAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp GTTCCTACCACCCTTAGGGCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTCAAGACTTGGGCATCTaGGGTCAGGACTCCTACGGG +
Preference number: 2 (lower is better)
Translates to: VPTTLRAYSTAFWGSCNAQDLGI*GQDSYG
Trigger: CCCGTAGGAGTCCTGACCCCAGATGCCCAAGTCTTG...AGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGTAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp GTTCCTACCACCCTTAGGGCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTCAAGGGTTTCCTGGGTaGGTAAGAAGCTGGGGCTCC +
Preference number: 2 (lower is better)
Translates to: VPTTLRAYSTAFWGSCNAQGFPG*VRSWGS
Trigger: GGAGCCCCAGCTTCTTACCCACCCAGGAAACCCTTG...AGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGTAGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp AGAGGCACTGAATCTCAAATCTTAGTTTCCTGGGTCCCTCCTGGGTTCCTACCATGGGAAAGGCCTGTCTaGCTCAAACCTCCCTTCCTC +
Preference number: 2 (lower is better)
Translates to: RGTESQILVSWVPPGFLPWERPV*LKPPFL
Trigger: GAGGAAGGGAGGTTTGAGCCAGACAGGCCTTTCCCA...TGGTAGGAACCCAGGAGGGACCCAGGAAACTAAGATTTGAGATTCAGTGCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR TCA 90 bp GTTCCTACCACCCTTAGGGCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGGCAGGAGAATCCCTTaGACCCAGGAGGTAGAGGTT +
Preference number: 2 (lower is better)
Translates to: VPTTLRAYSTAFWGSCNAGRRIP*TQEVEV
Trigger: AACCTCTACCTCCTGGGTTCAAGGGATTCTCCTGCC...AGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGTAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp CCTTCCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCAAGCAGAGTGGCTGTCTaGGCTCCCATTCCTTTCTCC +
Preference number: 2 (lower is better)
Translates to: PSSIPPLYEPEKMFFSVSSRVAV*APIPFS
Trigger: GGAGAAAGGAATGGGAGCCCAGACAGCCACTCTGCT...TGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR TCA 90 bp AGAGGCACTGAATCTCAAATCTTAGTTTCCTGGGTCCCTCCTGGGTTCCTACCACTCAGGTCAGGAGTTTaGGACCACCCTGACCAATAT +
Preference number: 2 (lower is better)
Translates to: RGTESQILVSWVPPGFLPLRSGV*DHPDQY
Trigger: ATATTGGTCAGGGTGGTCTCAAACTCCTGACCTGAG...TGGTAGGAACCCAGGAGGGACCCAGGAAACTAAGATTTGAGATTCAGTGCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR TCA 90 bp TCCATTTTACAGCTGGAGAAGCCGAGATCCAGAAAGGACCCCCAAGTTGTGGGCACCTCTCTACGAGCCTaGGAAAATGTTCTTCTCTGT +
Preference number: 2 (lower is better)
Translates to: SILQLEKPRSRKDPQVVGTSLRA*ENVLLC
Trigger: ACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGT...GCCCACAACTTGGGGGTCCTTTCTGGATCTCGGCTTCTCCAGCTGTAAAATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp GTTCCTACCACCCTTAGGGCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTAGTTCTTCTCAAGGGTaGGGGCCTCTCCAGAGCATT +
Preference number: 2 (lower is better)
Translates to: VPTTLRAYSTAFWGSCNASSSQG*GPLQSI
Trigger: AATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAACT...AGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGTAGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CCA 90 bp CCTTCCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCACCTACAGAGAGGGAATaGGACAAATTCACTCCCAGA +
Preference number: 2 (lower is better)
Translates to: PSSIPPLYEPEKMFFSVSPTERE*DKFTPR
Trigger: TCTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGG...TGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CCA 72 bp GGTCAGGACTCCTACGGGGTCCAGTGGGTGAGAGGATaGGAGGGCGATCCTAAATCCCCTGCCTTCCTCTGC +
Preference number: 3 (lower is better)
Translates to: GQDSYGVQWVRG*EGDPKSPAFLC
Trigger: GCAGAGGAAGGCAGGGGATTTAGGATCGCCCTCCCATCCTCTCACCCACTGGACCCCGTAGGAGTCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CCA 72 bp GGCTCCCATTCCTTTCTCCCCCAAGACTTGGGCATCTaGGGTCAGGACTCCTACGGGGTCCAGTGGGTGAGA +
Preference number: 3 (lower is better)
Translates to: GSHSFLPQDLGI*GQDSYGVQWVR
Trigger: TCTCACCCACTGGACCCCGTAGGAGTCCTGACCCCAGATGCCCAAGTCTTGGGGGAGAAAGGAATGGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR TCA 72 bp GGTCATGAGTCAATGGCTAGATGGGCACTTCCCCTCTaGGGATTGTTCCTGCCTGAGAGTGGGCTGTGGGGT +
Preference number: 3 (lower is better)
Translates to: GHESMARWALPL*GLFLPESGLWG
Trigger: ACCCCACAGCCCACTCTCAGGCAGGAACAATCCTCAGAGGGGAAGTGCCCATCTAGCCATTGACTCATGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CAA 90 bp AGCCTGGAGACGGCTTCTTTGACCCAGGTCATGAGTCAATGGCTAGATGGGCACAGGAATAAAGACCTATaGGGAGAGGCCGGGCACGGT +
Preference number: 3 (lower is better)
Translates to: SLETASLTQVMSQWLDGHRNKDL*GEAGHG
Trigger: ACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCCT...GTGCCCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CCA 72 bp CCCACCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATaGGACAAATTCACTCCCAGATTCTACCTAGAAACG +
Preference number: 3 (lower is better)
Translates to: PTERWGSPTERE*DKFTPRFYLET
Trigger: CGTTTCTAGGTAGAATCTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CCA 72 bp CTGGAGACGGCTTCTTTGACCCAGGTCATGAGTCAATaGCTAGATGGGCACTTCCCCTCTGAGGATTGTTCC +
Preference number: 3 (lower is better)
Translates to: LETASLTQVMSQ*LDGHFPSEDCS
Trigger: GGAACAATCCTCAGAGGGGAAGTGCCCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CCA 72 bp AGTCCCTGGAGGAGGATTGTGTGTCCATTTTACAGCTaGAGAAGCCGAGATCCAGAAAGGACCCCCAAGTTG +
Preference number: 3 (lower is better)
Translates to: SPWRRIVCPFYS*RSRDPERTPKL
Trigger: CAACTTGGGGGTCCTTTCTGGATCTCGGCTTCTCCAGCTGTAAAATGGACACACAATCCTCCTCCAGGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CAA 90 bp GCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACAGGAATAAAGACCTATaGGGAGAGGCCGGGCACGGT +
Preference number: 3 (lower is better)
Translates to: AYSTAFWGSCNADREPGDRNKDL*GEAGHG
Trigger: ACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCCT...GTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CCA 72 bp GTTCCTACCACCCTTAGGGCTTATTCAACAGCTTTCTaGGGATCCTGTAATGCTGACAGAGAGCCTGGAGAC +
Preference number: 3 (lower is better)
Translates to: VPTTLRAYSTAF*GSCNADREPGD
Trigger: GTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGTAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CAA 90 bp CAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGACAAACAAAGATCTATaGGTAGAGCAGTCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: QLSGDPVMLTESLETASLTNKDL*VEQSLS
Trigger: GGACAGAGACTGCTCTACCAATAGATCTTTGTTTGT...CAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR-3UTR CAA 90 bp TCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCAGAGCATTTGGAGGATaGAGGAATAAAGACCTATTG +
Preference number: 3 (lower is better)
Translates to: STAFWGSCNADREPGDGFRAFGG*RNKDLL
Trigger: CAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCT...GAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp CAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCGCGGCCACGCTGGCCTTCCAGGTaGCCTGCACAGCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: QGEPPGRSCKAGSPRARPRWPSR*PAQPWR
Trigger: CCGCCATGGCTGTGCAGGTCACCTGGAAGGCCAGCG...TGGCCGCGCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp CCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCGCGGCCGCCTTCCAGGTGACCTaGACAGCCATGGCGGTGACC +
Preference number: 4 (lower is better)
Translates to: PGRTSRQVLQGRKPKGAAAFQVT*TAMAVT
Trigger: GGTCACCGCCATGGCTGTGCAGGTCACCTGGAAGGC...GGCCGCGCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GTAATGCCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCACGGCGGGGTTGGCGTaGGCCCCGCTGGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VMPGRTSRQVLQGRKPKGTAGLA*APLAFQ
Trigger: CTGGAAGGCCAGCGGGGCCCACGCCAACCCCGCCGT...GCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGGCATTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615425.1
CDS-3UTR TCA 90 bp CCACCCCCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCCACCGCCTGGCCAGTTaGGACACTGTTCCGGACCAC +
Preference number: 4 (lower is better)
Translates to: PPPGRTSRQVLQGRKPKGHRLAS*DTVPDH
Trigger: GTGGTCCGGAACAGTGTCTCAACTGGCCAGGCGGTG...GCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGGGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR TCA 90 bp CCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCGCGGCCGGCTGTCCCAGGGCCTaGTTCCTCCAGAAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: PGRTSRQVLQGRKPKGAAGCPRA*FLQKAC
Trigger: ACAGGCTTTCTGGAGGAATCAGGCCCTGGGACAGCC...GGCCGCGCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CCACCCCCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCGGGAGGAGGCTTCCCTaGGAAAGGCCTGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PPPGRTSRQVLQGRKPKGGRRLP*ERPVWL
Trigger: GAGCCAGACAGGCCTTTCCCAGGGAAGCCTCCTCCC...GCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGGGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR GCA 90 bp CCACCCCCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCGGCCGTTCCTTGCCTTaGTCTGGGGCCTCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PPPGRTSRQVLQGRKPKGGRSLP*SGASSL
Trigger: CAGAGAAGAGGCCCCAGAGCAAGGCAAGGAACGGCC...GCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGGGGGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CCA 90 bp CCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCGCGGCCCAGAGATCCCAATCATaGTGGCCGGGGAGCCTGATG +
Preference number: 4 (lower is better)
Translates to: PGRTSRQVLQGRKPKGAAQRSQS*WPGSLM
Trigger: CATCAGGCTCCCCGGCCACCATGATTGGGATCTCTG...GGCCGCGCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp GCCAGGGATAGGGCTTGTCCCCTCCAGCCCACCTGGTCAGGACAAAAGGTCAAGGCCTGCACGCCAACATaGTGGCCCAGCCACGTCCCC +
Preference number: 4 (lower is better)
Translates to: ARDRACPLQPTWSGQKVKACTPT*WPSHVP
Trigger: GGGGACGTGGCTGGGCCAGCATGTTGGCGTGCAGGC...CTTGACCTTTTGTCCTGACCAGGTGGGCTGGAGGGGACAAGCCCTATCCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CCA 90 bp CCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCGCGGCCTGGGAAAGGCCTGTCTaGCTCAAACCTCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PGRTSRQVLQGRKPKGAAWERPV*LKPPFL
Trigger: GAGGAAGGGAGGTTTGAGCCAGACAGGCCTTTCCCA...GGCCGCGCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp TCCCATTCCTTTCTCCCCCAAGACTTGGGCATCTGGGGTCAGGACTCCTACGGGCGCTGGCCTTCCAGGTaGCCTGCACAGCCATGGCGG +
Preference number: 4 (lower is better)
Translates to: SHSFLPQDLGIWGQDSYGRWPSR*PAQPWR
Trigger: CCGCCATGGCTGTGCAGGTCACCTGGAAGGCCAGCG...CCCGTAGGAGTCCTGACCCCAGATGCCCAAGTCTTGGGGGAGAAAGGAATGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GCCACCCCCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGAGATCCCAATCATGGTaGCCGGGGAGCCTGATGTCT +
Preference number: 4 (lower is better)
Translates to: ATPRENLQAGPARQEAQGRSQSW*PGSLMS
Trigger: AGACATCAGGCTCCCCGGCCACCATGATTGGGATCT...CCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGGGGGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CCA 90 bp GTAATGCCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCTGTCCCACCGAGAGGTaGGGAAGCCCTACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: VMPGRTSRQVLQGRKPKGCPTER*GSPTER
Trigger: CCTCTCTGTAGGGCTTCCCCACCTCTCGGTGGGACA...GCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGGCATTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615425.1
CDS-3UTR CCA 90 bp GCCACCCCCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGAGTTCTTCTCAAGGGTaGGGGCCTCTCCAGAGCATT +
Preference number: 4 (lower is better)
Translates to: ATPRENLQAGPARQEAQGSSSQG*GPLQSI
Trigger: AATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAACT...CCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGGGGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CCA 90 bp CAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCGCGGCCACAGGTCATGAGTCAATaGCTAGATGGGCACTTCCCC +
Preference number: 4 (lower is better)
Translates to: QGEPPGRSCKAGSPRARPQVMSQ*LDGHFP
Trigger: GGGGAAGTGCCCATCTAGCCATTGACTCATGACCTG...TGGCCGCGCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp GCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGCCGGGCACGGTGGCGGTGGCCGGGGAGCCTaGTGTCTGACGGCTGTCGGT +
Preference number: 4 (lower is better)
Translates to: AFGGLRNKDLLGEAGHGGGGRGA*CLTAVG
Trigger: ACCGACAGCCGTCAGACATCAGGCTCCCCGGCCACC...GCCACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp GTCCCAGGGCCTGATTCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCAGGATAGCCAGCCGCTaGGCCAGGGTCTTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: VPGPDSSRKPVLSGPRVSRIASR*ARVLVS
Trigger: CGACACCAAGACCCTGGCGCAGCGGCTGGCTATCCT...GGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGAATCAGGCCCTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CCTGAGGTCCCTATAGCTCCCATGTCTAAGCAGAGTGGCTGTCTGGGCTCCCATCTGTGCTGGTCAGACTaGCAGGGCGCAGGCGGATGG +
Preference number: 4 (lower is better)
Translates to: PEVPIAPMSKQSGCLGSHLCWSD*QGAGGW
Trigger: CCATCCGCCTGCGCCCTGCCAGTCTGACCAGCACAG...ATGGGAGCCCAGACAGCCACTCTGCTTAGACATGGGAGCTATAGGGACCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CCA 90 bp CACCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCAGTGCACGCCAACATGCTaGCCCAGCCACGTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: HREVGKPYREGMGQIHSQCTPTC*PSHVPL
Trigger: CAGGGGGACGTGGCTGGGCCAGCATGTTGGCGTGCA...CTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GTCCCAGGGCCTGATTCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCGCTGCGCCAGGGTCTTaGTGTCGGGGAACAGGACGA +
Preference number: 4 (lower is better)
Translates to: VPGPDSSRKPVLSGPRVSAAPGS*CRGTGR
Trigger: TCGTCCTGTTCCCCGACACCAAGACCCTGGCGCAGC...GGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGAATCAGGCCCTGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp TCCCAGGGCCTGATTCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCTGGGCCAGCGCATGACTaGGCCCACGCCAAAGAACAC +
Preference number: 4 (lower is better)
Translates to: SQGLIPPESLSSLDQGFPGPAHD*AHAKEH
Trigger: GTGTTCTTTGGCGTGGGCTCAGTCATGCGCTGGCCC...AGGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGAATCAGGCCCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp CTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGACCGGTGGCCGGGGAGCCTaGTGTCTGACGGCTGTCGGT +
Preference number: 4 (lower is better)
Translates to: LSGDPVMLTESLETASLTGGRGA*CLTAVG
Trigger: ACCGACAGCCGTCAGACATCAGGCTCCCCGGCCACC...GGTCAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp GCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGCCGGGCACGGTGGCTCTCTGGCCCCCACCTaGAGCTCCTCCACCACGCTC +
Preference number: 4 (lower is better)
Translates to: AFGGLRNKDLLGEAGHGGSLAPT*SSSTTL
Trigger: GAGCGTGGTGGAGGAGCTGCAGGTGGGGGCCAGAGA...GCCACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR GCA 90 bp GTAATGCCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCCCAGGAGGTAGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: VMPGRTSRQVLQGRKPKGPGGRG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCTACCTCCTGG...GCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGGCATTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615425.1
CDS-3UTR CCA 90 bp GTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAACGGCGGGGTTGGCGTaGGCCCCGCTGGCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VLLKGGGLSRAFGGLRNKTAGLA*APLAFQ
Trigger: CTGGAAGGCCAGCGGGGCCCACGCCAACCCCGCCGT...TTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CCCACCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCGGGTGGGTAAGAAGCTaGGGCTCCCTGAGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: PTERWGSPTEREWDKFTPGWVRS*GSLRSL
Trigger: TAGGGACCTCAGGGAGCCCCAGCTTCTTACCCACCC...GGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCAGATCTGTGGGGTGGGAGCTaGGGCAAGCACCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PRGGEALQRGNGTNSLPDLWGGS*GKHLGG
Trigger: TCCTCCCAGGTGCTTGCCCCAGCTCCCACCCCACAG...ATCTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp CCCACCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCCAAACAGCGCCCTGCTaGTGGCTTTCCAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PTERWGSPTEREWDKFTPQTAPC*WLSKAC
Trigger: GCAGGCTTTGGAAAGCCATCAGCAGGGCGCTGTTTG...GGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp GCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGCCGGGCACGGTGGCCTGTGGGCCAGCGCATaGCTGAGCCCACGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: AFGGLRNKDLLGEAGHGGLWASA*LSPRQR
Trigger: TCTTTGGCGTGGGCTCAGTCATGCGCTGGCCCACAG...GCCACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp CAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGGGGGAGCCTGATGTCTaGCGGCTGTCGGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: QLSGDPVMLTESLETASLGEPDV*RLSVEA
Trigger: CGCTTCCACCGACAGCCGTCAGACATCAGGCTCCCC...CAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp GGGCTCCCTGAGGTCCCTATAGCTCCCATGTCTAAGCAGAGTGGCTGTCTGGGCGAAGTTGTAGATCAGTaGGGCCAGGAGGGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: GLPEVPIAPMSKQSGCLGEVVDQ*GQEGSH
Trigger: ATGGGAGCCCTCCTGGCCTCACTGATCTACAACTTC...GCCCAGACAGCCACTCTGCTTAGACATGGGAGCTATAGGGACCTCAGGGAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp TCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCACGGGGTCCAGTGGGTaGGAGGATGGGAGGGCGATC +
Preference number: 4 (lower is better)
Translates to: STAFWGSCNADREPGDGFTGSSG*EDGRAI
Trigger: GATCGCCCTCCCATCCTCTCACCCACTGGACCCCGT...GAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp CAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGACGGGGTCCAGTGGGTaGGAGGATGGGAGGGCGATC +
Preference number: 4 (lower is better)
Translates to: QLSGDPVMLTESLETASLTGSSG*EDGRAI
Trigger: GATCGCCCTCCCATCCTCTCACCCACTGGACCCCGT...CAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GTCCCAGGGCCTGATTCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCCAGAGATCCCAATCATaGTGGCCGGGGAGCCTGATG +
Preference number: 4 (lower is better)
Translates to: VPGPDSSRKPVLSGPRVSQRSQS*WPGSLM
Trigger: CATCAGGCTCCCCGGCCACCATGATTGGGATCTCTG...GGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGAATCAGGCCCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGCCGGGCACGGTGGCGCTGCGCCAGGGTCTTaGTGTCGGGGAACAGGACGA +
Preference number: 4 (lower is better)
Translates to: AFGGLRNKDLLGEAGHGGAAPGS*CRGTGR
Trigger: TCGTCCTGTTCCCCGACACCAAGACCCTGGCGCAGC...GCCACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCTGGGTGGGTAAGAAGGCTCCCGAACCCGGCTaGGATTCCTTCTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SSRKPVLSGPRVSWVGKKAPEPG*DSFFRG
Trigger: GCCCCTGAAGAAGGAATCCCAGCCGGGTTCGGGAGC...CTTCTTACCCACCCAGGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCCCAGGGCCTGATTCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCTTGTCCCACCGAGAGGTaGGGAAGCCCTACAGAGAGG +
Preference number: 4 (lower is better)
Translates to: SQGLIPPESLSSLDQGFPCPTER*GSPTER
Trigger: CCTCTCTGTAGGGCTTCCCCACCTCTCGGTGGGACA...AGGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGAATCAGGCCCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CTCCCATTCCTTTCTCCCCCAAGACTTGGGCATCTGGGGTCAGGACTCCTACGGCAAGACTTGGGCATCTaGGGTCAGGACTCCTACGGG +
Preference number: 4 (lower is better)
Translates to: LPFLSPPRLGHLGSGLLRQDLGI*GQDSYG
Trigger: CCCGTAGGAGTCCTGACCCCAGATGCCCAAGTCTTG...CCGTAGGAGTCCTGACCCCAGATGCCCAAGTCTTGGGGGAGAAAGGAATGGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GTCCCAGGGCCTGATTCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCCAAGGGTTTCCTGGGTaGGTAAGAAGCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: VPGPDSSRKPVLSGPRVSQGFPG*VRSWGS
Trigger: GGAGCCCCAGCTTCTTACCCACCCAGGAAACCCTTG...GGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGAATCAGGCCCTGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CGTAATGCCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCAGGTCATGAGTCAATaGCTAGATGGGCACTTCCCC +
Preference number: 4 (lower is better)
Translates to: RNARENLQAGPARQEAQGQVMSQ*LDGHFP
Trigger: GGGGAAGTGCCCATCTAGCCATTGACTCATGACCTG...CCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGGCATTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615425.1
CDS-3UTR TCA 90 bp TCCCAGGGCCTGATTCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCTCAAACAGCGCCCTGCTaGTGGCTTTCCAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SQGLIPPESLSSLDQGFPQTAPC*WLSKAC
Trigger: GCAGGCTTTGGAAAGCCATCAGCAGGGCGCTGTTTG...AGGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGAATCAGGCCCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp AGCCTGGAGACGGCTTCTTTGACCCAGGTCATGAGTCAATGGCTAGATGGGCACAGGATTGTTCCTGCCTaGGAGTGGGCTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SLETASLTQVMSQWLDGHRIVPA*EWAVGW
Trigger: CCACCCCACAGCCCACTCTCAGGCAGGAACAATCCT...GTGCCCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp GGAGACGGCTTCTTTGACCCAGGTCATGAGTCAATGGCTAGATGGGCACTTCCCGCCTTGGCCGTTCCTTaGCTTGCTCTGGGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: GDGFFDPGHESMARWALPALAVP*LALGPL
Trigger: AAGAGGCCCCAGAGCAAGGCAAGGAACGGCCAAGGC...GGGAAGTGCCCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CCA 90 bp GGGCTCCCTGAGGTCCCTATAGCTCCCATGTCTAAGCAGAGTGGCTGTCTGGGCACACATACAGCCCCGTaGCCAGGAACTCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: GLPEVPIAPMSKQSGCLGTHTAP*PGTLQT
Trigger: TGTTTGCAGAGTTCCTGGCCACGGGGCTGTATGTGT...GCCCAGACAGCCACTCTGCTTAGACATGGGAGCTATAGGGACCTCAGGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CCTGAGGTCCCTATAGCTCCCATGTCTAAGCAGAGTGGCTGTCTGGGCTCCCATTCCACTGCCACCGCCTaGCCAGTTGAGACACTGTTC +
Preference number: 4 (lower is better)
Translates to: PEVPIAPMSKQSGCLGSHSTATA*PVETLF
Trigger: GAACAGTGTCTCAACTGGCCAGGCGGTGGCAGTGGA...ATGGGAGCCCAGACAGCCACTCTGCTTAGACATGGGAGCTATAGGGACCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCCCATTCCTTTCTCCCCCAAGACTTGGGCATCTGGGGTCAGGACTCCTACGGGTCTGACGGCTGTCGGTaGAAGCGAAGACACAGAGCA +
Preference number: 4 (lower is better)
Translates to: SHSFLPQDLGIWGQDSYGSDGCR*KRRHRA
Trigger: TGCTCTGTGTCTTCGCTTCCACCGACAGCCGTCAGA...CCCGTAGGAGTCCTGACCCCAGATGCCCAAGTCTTGGGGGAGAAAGGAATGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGACCTCCTACGGGGTCCAGTaGGTGAGAGGATGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LSGDPVMLTESLETASLTSYGVQ*VRGWEG
Trigger: GCCCTCCCATCCTCTCACCCACTGGACCCCGTAGGA...GGTCAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGTCCTACGGGGTCCAGTaGGTGAGAGGATGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: QLSGDPVMLTESLETASLSYGVQ*VRGWEG
Trigger: GCCCTCCCATCCTCTCACCCACTGGACCCCGTAGGA...CAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CCTGAGGTCCCTATAGCTCCCATGTCTAAGCAGAGTGGCTGTCTGGGCTCCCATCAAGGGTTTCCTGGGTaGGTAAGAAGCTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PEVPIAPMSKQSGCLGSHQGFPG*VRSWGS
Trigger: GGAGCCCCAGCTTCTTACCCACCCAGGAAACCCTTG...ATGGGAGCCCAGACAGCCACTCTGCTTAGACATGGGAGCTATAGGGACCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CCCACCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCGGAATAAAGACCTATTaGGAGAGGCCGGGCACGGTG +
Preference number: 4 (lower is better)
Translates to: PTERWGSPTEREWDKFTPGIKTY*ERPGTV
Trigger: CACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCC...GGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp AGAGAGCCTGGAGACGGCTTCTTTGACCCAGGTCATGAGTCAATGGCTAGATGGGGGAGGAGGCTTCCCTaGGAAAGGCCTGTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: REPGDGFFDPGHESMARWGRRLP*ERPVWL
Trigger: GAGCCAGACAGGCCTTTCCCAGGGAAGCCTCCTCCC...CCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAGGCTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp GCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGGGAGCCTGATGTCTaGCGGCTGTCGGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: AYSTAFWGSCNADREPGDGEPDV*RLSVEA
Trigger: CGCTTCCACCGACAGCCGTCAGACATCAGGCTCCCC...GTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp TCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCGAAGCTGGGGCTCCCTaGGGTCCCTATAGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: STAFWGSCNADREPGDGFEAGAP*GPYSSH
Trigger: ATGGGAGCTATAGGGACCTCAGGGAGCCCCAGCTTC...GAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp CCTGAGGTCCCTATAGCTCCCATGTCTAAGCAGAGTGGCTGTCTGGGCTCCCATGGCAGGAGAATCCCTTaGACCCAGGAGGTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: PEVPIAPMSKQSGCLGSHGRRIP*TQEVEV
Trigger: AACCTCTACCTCCTGGGTTCAAGGGATTCTCCTGCC...ATGGGAGCCCAGACAGCCACTCTGCTTAGACATGGGAGCTATAGGGACCTCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp TCCCAGGGCCTGATTCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCTGCTGACCCTGGCTTTTaGTCTCTGTGGAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: SQGLIPPESLSSLDQGFPADPGF*SLWRLL
Trigger: GAGAAGCCTCCACAGAGAGCAAAAGCCAGGGTCAGC...AGGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGAATCAGGCCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR GCA 90 bp AGCCTGGAGACGGCTTCTTTGACCCAGGTCATGAGTCAATGGCTAGATGGGCACGCATCCATGTCCTGGTaGCTTGGCCGTTCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SLETASLTQVMSQWLDGHASMSW*LGRSLP
Trigger: AGGCAAGGAACGGCCAAGGCACCAGGACATGGATGC...GTGCCCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR GCA 90 bp CCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCAGTTCGCCTGCACGCCAACATaGTGGCCCAGCCACGTCCCC +
Preference number: 4 (lower is better)
Translates to: PLSHLSTSLRKCSSLCQFACTPT*WPSHVP
Trigger: GGGGACGTGGCTGGGCCAGCATGTTGGCGTGCAGGC...GAACTGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp GCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGCCGGGCACGGTGGCACACAGAGCACCAGCTaGAGGGTCAGAAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: AFGGLRNKDLLGEAGHGGTQSTS*RVRSSS
Trigger: GGAGCTGCTTCTGACCCTGCAGCTGGTGCTCTGTGT...GCCACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TGTCCCACCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCATGTCCTGGTGCCTTaGCCGTTCCTTGCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: CPTERWGSPTEREWDKFTHVLVP*PFLALL
Trigger: GAGCAAGGCAAGGAACGGCCAAGGCACCAGGACATG...AGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGGTGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CCA 90 bp GGGGGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGCCAGCCACGTCCCCCTaGCTCCACTGCATCCATGTC +
Preference number: 4 (lower is better)
Translates to: GGLSRAFGGLRNKDLLGEPATSP*LHCIHV
Trigger: GACATGGATGCAGTGGAGCCAGGGGGACGTGGCTGG...CTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CCA 90 bp GCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACTGCACGCCAACATGCTaGCCCAGCCACGTCCCCCTG +
Preference number: 4 (lower is better)
Translates to: AYSTAFWGSCNADREPGDCTPTC*PSHVPL
Trigger: CAGGGGGACGTGGCTGGGCCAGCATGTTGGCGTGCA...GTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCCCAGGGCCTGATTCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCTAGATCCCAATCATGGTaGCCGGGGAGCCTGATGTCT +
Preference number: 4 (lower is better)
Translates to: SQGLIPPESLSSLDQGFPRSQSW*PGSLMS
Trigger: AGACATCAGGCTCCCCGGCCACCATGATTGGGATCT...AGGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGAATCAGGCCCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp AGCCTGGAGACGGCTTCTTTGACCCAGGTCATGAGTCAATGGCTAGATGGGCACGAGCAGCCAGTGAAGTaGATCCCAATGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLETASLTQVMSQWLDGHEQPVK*IPMRWP
Trigger: GGGCCACCTCATTGGGATCCACTTCACTGGCTGCTC...GTGCCCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GGGCTCCCTGAGGTCCCTATAGCTCCCATGTCTAAGCAGAGTGGCTGTCTGGGCACCCAGAAGACCCAGTaGACTGTGAACTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: GLPEVPIAPMSKQSGCLGTQKTQ*TVNFPM
Trigger: CATTGGGAAGTTCACAGTCCACTGGGTCTTCTGGGT...GCCCAGACAGCCACTCTGCTTAGACATGGGAGCTATAGGGACCTCAGGGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCCATTTTACAGCTGGAGAAGCCGAGATCCAGAAAGGACCCCCAAGTTGTGGGCGGGTGGGTAAGAAGCTaGGGCTCCCTGAGGTCCCTA +
Preference number: 4 (lower is better)
Translates to: SILQLEKPRSRKDPQVVGGWVRS*GSLRSL
Trigger: TAGGGACCTCAGGGAGCCCCAGCTTCTTACCCACCC...GCCCACAACTTGGGGGTCCTTTCTGGATCTCGGCTTCTCCAGCTGTAAAATGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCTGAAGGAGGAAATATAGCCCCCAAAACCACACCCAAGGTCAGAGAAACACCCCTGTGGGGTGGGAGCTaGGGCAAGCACCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SEGGNIAPKTTPKVRETPLWGGS*GKHLGG
Trigger: TCCTCCCAGGTGCTTGCCCCAGCTCCCACCCCACAG...GGGTGTTTCTCTGACCTTGGGTGTGGTTTTGGGGGCTATATTTCCTCCTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CGTAATGCCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCAAATCTTAGTTTCCTaGGTCCCTCCTGGGTTCCTA +
Preference number: 4 (lower is better)
Translates to: RNARENLQAGPARQEAQGQILVS*VPPGFL
Trigger: TAGGAACCCAGGAGGGACCCAGGAAACTAAGATTTG...CCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGGCATTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615425.1
CDS-3UTR TCA 90 bp TCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCTGGGTGGGTAAGAAGTGTCCTGTCTCTGGCTaGCCCTGGCTTTTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SSRKPVLSGPRVSWVGKKCPVSG*PWLLLS
Trigger: AGAGAGCAAAAGCCAGGGTCAGCCAGAGACAGGACA...CTTCTTACCCACCCAGGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR TCA 90 bp AGAGAGCCTGGAGACGGCTTCTTTGACCCAGGTCATGAGTCAATGGCTAGATGGGGATGTCTCCCGGCATaGCCCCATAAAGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: REPGDGFFDPGHESMARWGCLPA*PHKAEQ
Trigger: CTGCTCTGCTTTATGGGGTCATGCCGGGAGACATCC...CCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAGGCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp GCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACCACCGCCTGGCCAGTTaGGACACTGTTCCGGACCAC +
Preference number: 4 (lower is better)
Translates to: AYSTAFWGSCNADREPGDHRLAS*DTVPDH
Trigger: GTGGTCCGGAACAGTGTCTCAACTGGCCAGGCGGTG...GTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp CCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCAGATAGGAAGCCCCCAGTCTaGAGGAGGAAATATAGCCCC +
Preference number: 4 (lower is better)
Translates to: PRGGEALQRGNGTNSLPDRKPPV*RRKYSP
Trigger: GGGGCTATATTTCCTCCTTCAGACTGGGGGCTTCCT...ATCTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp TCTGTGTCAGTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTGTGGGCACTTCCCCTCTaGGGATTGTTCCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SVSVLLKGGGLSRAFGGLWALPL*GLFLPE
Trigger: CTCAGGCAGGAACAATCCTCAGAGGGGAAGTGCCCA...CAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAACTGACACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp GCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGCCTTCCAGGTGACCTaGACAGCCATGGCGGTGACC +
Preference number: 4 (lower is better)
Translates to: AYSTAFWGSCNADREPGDAFQVT*TAMAVT
Trigger: GGTCACCGCCATGGCTGTGCAGGTCACCTGGAAGGC...GTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp TCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCACACAGAGCACCAGCTaGAGGGTCAGAAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: STAFWGSCNADREPGDGFTQSTS*RVRSSS
Trigger: GGAGCTGCTTCTGACCCTGCAGCTGGTGCTCTGTGT...GAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp AGCCTGGAGACGGCTTCTTTGACCCAGGTCATGAGTCAATGGCTAGATGGGCACCTGGTGTCCTGTCTCTaGCTGACCCTGGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SLETASLTQVMSQWLDGHLVSCL*LTLAFA
Trigger: AGCAAAAGCCAGGGTCAGCCAGAGACAGGACACCAG...GTGCCCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CCA 90 bp CCTGAGGTCCCTATAGCTCCCATGTCTAAGCAGAGTGGCTGTCTGGGCTCCCATTTCCTTGCCTTGCTCTaGGGCCTCTTCTCTGTTCCT +
Preference number: 4 (lower is better)
Translates to: PEVPIAPMSKQSGCLGSHFLALL*GLFSVP
Trigger: AGGAACAGAGAAGAGGCCCCAGAGCAAGGCAAGGAA...ATGGGAGCCCAGACAGCCACTCTGCTTAGACATGGGAGCTATAGGGACCTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CCA 90 bp GTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAACGGGGCAGAGAGATGTaGGAGCCTACGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: VLLKGGGLSRAFGGLRNKRGREM*EPTRKA
Trigger: GGCCTTCCTCGTAGGCTCCCACATCTCTCTGCCCCG...TTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCTGAAGGAGGAAATATAGCCCCCAAAACCACACCCAAGGTCAGAGAAACACCCCGGGGCAGAGAGATGTaGGAGCCTACGAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SEGGNIAPKTTPKVRETPRGREM*EPTRKA
Trigger: GGCCTTCCTCGTAGGCTCCCACATCTCTCTGCCCCG...GGGTGTTTCTCTGACCTTGGGTGTGGTTTTGGGGGCTATATTTCCTCCTTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCCATTTTACAGCTGGAGAAGCCGAGATCCAGAAAGGACCCCCAAGTTGTGGGCCAAGACTTGGGCATCTaGGGTCAGGACTCCTACGGG +
Preference number: 4 (lower is better)
Translates to: SILQLEKPRSRKDPQVVGQDLGI*GQDSYG
Trigger: CCCGTAGGAGTCCTGACCCCAGATGCCCAAGTCTTG...GCCCACAACTTGGGGGTCCTTTCTGGATCTCGGCTTCTCCAGCTGTAAAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCTGGGTGGGTAAGAAGAGCAGAGTGGCTGTCTaGGCTCCCATTCCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSRKPVLSGPRVSWVGKKSRVAV*APIPFS
Trigger: GGAGAAAGGAATGGGAGCCCAGACAGCCACTCTGCT...CTTCTTACCCACCCAGGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCTGGGTGGGTAAGAAGGGAATAAAGACCTATTaGGAGAGGCCGGGCACGGTG +
Preference number: 4 (lower is better)
Translates to: SSRKPVLSGPRVSWVGKKGIKTY*ERPGTV
Trigger: CACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCC...CTTCTTACCCACCCAGGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CTCCCATTCCTTTCTCCCCCAAGACTTGGGCATCTGGGGTCAGGACTCCTACGGTTTCACAGCAGTCCCTaGAGGAGGATTGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LPFLSPPRLGHLGSGLLRFHSSP*RRIVCP
Trigger: TGGACACACAATCCTCCTCCAGGGACTGCTGTGAAA...CCGTAGGAGTCCTGACCCCAGATGCCCAAGTCTTGGGGGAGAAAGGAATGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp CCTTCCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCAGGGCCAGCGCATGACTaGGCCCACGCCAAAGAACAC +
Preference number: 4 (lower is better)
Translates to: PSSIPPLYEPEKMFFSVSGPAHD*AHAKEH
Trigger: GTGTTCTTTGGCGTGGGCTCAGTCATGCGCTGGCCC...TGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp CCTTCCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCACTGTGGGCCAGCGCATaGCTGAGCCCACGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: PSSIPPLYEPEKMFFSVSLWASA*LSPRQR
Trigger: TCTTTGGCGTGGGCTCAGTCATGCGCTGGCCCACAG...TGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp GGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGCCTGTTCCGGACCACGTTaGTCCCAAGGGTCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: GLSRAFGGLRNKDLLGEACSGPR*SQGSLG
Trigger: TCCGAGAGACCCTTGGGATCAACGTGGTCCGGAACA...GGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp TCTGTGTCAGTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTGGAAGTTGTAGATCAGTaGGGCCAGGAGGGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SVSVLLKGGGLSRAFGGLEVVDQ*GQEGSH
Trigger: ATGGGAGCCCTCCTGGCCTCACTGATCTACAACTTC...CAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAACTGACACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp GCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTGTCCCAGGGCCTaGTTCCTCCAGAAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: AYSTAFWGSCNADREPGDGCPRA*FLQKAC
Trigger: ACAGGCTTTCTGGAGGAATCAGGCCCTGGGACAGCC...GTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp TCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCAGGAAGCCCCCAGTCTaGAGGAGGAAATATAGCCCC +
Preference number: 4 (lower is better)
Translates to: STAFWGSCNADREPGDGFRKPPV*RRKYSP
Trigger: GGGGCTATATTTCCTCCTTCAGACTGGGGGCTTCCT...GAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp TCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCGGCAGGAGAATCCCTTaGACCCAGGAGGTAGAGGTT +
Preference number: 4 (lower is better)
Translates to: STAFWGSCNADREPGDGFGRRIP*TQEVEV
Trigger: AACCTCTACCTCCTGGGTTCAAGGGATTCTCCTGCC...GAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp GCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACAGGATTGTTCCTGCCTaGGAGTGGGCTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AYSTAFWGSCNADREPGDRIVPA*EWAVGW
Trigger: CCACCCCACAGCCCACTCTCAGGCAGGAACAATCCT...GTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp TCTGAAGGAGGAAATATAGCCCCCAAAACCACACCCAAGGTCAGAGAAACACCCTCCCCCTGGCTCCACTaGATCCATGTCCTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SEGGNIAPKTTPKVRETPSPWLH*IHVLVP
Trigger: AGGCACCAGGACATGGATGCAGTGGAGCCAGGGGGA...GGGTGTTTCTCTGACCTTGGGTGTGGTTTTGGGGGCTATATTTCCTCCTTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR GCA 90 bp GGGGGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGTGGCTTTCCAAAGCCTaGACGCCAACATGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GGLSRAFGGLRNKDLLGEWLSKA*TPTCWP
Trigger: GGGCCAGCATGTTGGCGTGCAGGCTTTGGAAAGCCA...CTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp GGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGCCCGTGGCCAGGAACTCTaGAAACAGCGCCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: GLSRAFGGLRNKDLLGEARGQEL*KQRPAD
Trigger: ATCAGCAGGGCGCTGTTTGCAGAGTTCCTGGCCACG...GGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp CCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCAGTTCAGGATAGCCAGCCGCTaGGCCAGGGTCTTGGTGTCG +
Preference number: 4 (lower is better)
Translates to: PLSHLSTSLRKCSSLCQFRIASR*ARVLVS
Trigger: CGACACCAAGACCCTGGCGCAGCGGCTGGCTATCCT...GAACTGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp CTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGACCTCTGAGGATTGTTCCTaGCTGAGAGTGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LSGDPVMLTESLETASLTSEDCS*LRVGCG
Trigger: CCCACAGCCCACTCTCAGGCAGGAACAATCCTCAGA...GGTCAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGACTGCATCCATGTCCTaGTGCCTTGGCCGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: QLSGDPVMLTESLETASLTASMS*CLGRSL
Trigger: CAAGGAACGGCCAAGGCACCAGGACATGGATGCAGT...CAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CCA 90 bp TCTGTGTCAGTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTGTCTGACGGCTGTCGGTaGAAGCGAAGACACAGAGCA +
Preference number: 4 (lower is better)
Translates to: SVSVLLKGGGLSRAFGGLSDGCR*KRRHRA
Trigger: TGCTCTGTGTCTTCGCTTCCACCGACAGCCGTCAGA...CAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAACTGACACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GTTCCTACCACCCTTAGGGCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGCTCCCGAACCCGGCTaGGATTCCTTCTTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VPTTLRAYSTAFWGSCNAAPEPG*DSFFRG
Trigger: GCCCCTGAAGAAGGAATCCCAGCCGGGTTCGGGAGC...AGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGTAGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GTCCCAGGGCCTGATTCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCCCTACAGAGAGGGAATaGGACAAATTCACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: VPGPDSSRKPVLSGPRVSPTERE*DKFTPR
Trigger: TCTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGG...GGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGAATCAGGCCCTGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGAGCAGAGTGGCTGTCTaGGCTCCCATTCCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QLSGDPVMLTESLETASLSRVAV*APIPFS
Trigger: GGAGAAAGGAATGGGAGCCCAGACAGCCACTCTGCT...CAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CAA 72 bp CCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTaGACCCAGGTCATGAGTCAATGGCTAGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: PVMLTESLETAS*TQVMSQWLDGH
Trigger: GTGCCCATCTAGCCATTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp TCTGAAGGAGGAAATATAGCCCCCAAAACCACACCCAAGGTCAGAGAAACACCCGGATGTCTCCCGGCATaGCCCCATAAAGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SEGGNIAPKTTPKVRETPGCLPA*PHKAEQ
Trigger: CTGCTCTGCTTTATGGGGTCATGCCGGGAGACATCC...GGGTGTTTCTCTGACCTTGGGTGTGGTTTTGGGGGCTATATTTCCTCCTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp CCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCAGTTCGAAGCTGGGGCTCCCTaGGGTCCCTATAGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PLSHLSTSLRKCSSLCQFEAGAP*GPYSSH
Trigger: ATGGGAGCTATAGGGACCTCAGGGAGCCCCAGCTTC...GAACTGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp TCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCTGGGTGGGTAAGAAGCTCAGGTCAGGAGTTTaGGACCACCCTGACCAATAT +
Preference number: 4 (lower is better)
Translates to: SSRKPVLSGPRVSWVGKKLRSGV*DHPDQY
Trigger: ATATTGGTCAGGGTGGTCTCAAACTCCTGACCTGAG...CTTCTTACCCACCCAGGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp AGAGGCACTGAATCTCAAATCTTAGTTTCCTGGGTCCCTCCTGGGTTCCTACCATGGGCACTTCCCCTCTaGGGATTGTTCCTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RGTESQILVSWVPPGFLPWALPL*GLFLPE
Trigger: CTCAGGCAGGAACAATCCTCAGAGGGGAAGTGCCCA...TGGTAGGAACCCAGGAGGGACCCAGGAAACTAAGATTTGAGATTCAGTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACTCCACTGCCACCGCCTaGCCAGTTGAGACACTGTTC +
Preference number: 4 (lower is better)
Translates to: AYSTAFWGSCNADREPGDSTATA*PVETLF
Trigger: GAACAGTGTCTCAACTGGCCAGGCGGTGGCAGTGGA...GTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCTGAAGGAGGAAATATAGCCCCCAAAACCACACCCAAGGTCAGAGAAACACCCGGACCAAGGGTTTCCTaGGTGGGTAAGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SEGGNIAPKTTPKVRETPGPRVS*VGKKLG
Trigger: CCCCAGCTTCTTACCCACCCAGGAAACCCTTGGTCC...GGGTGTTTCTCTGACCTTGGGTGTGGTTTTGGGGGCTATATTTCCTCCTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCCATTTTACAGCTGGAGAAGCCGAGATCCAGAAAGGACCCCCAAGTTGTGGGCAAAGCCTGTCCTCTCTaGACCAAGGGTTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SILQLEKPRSRKDPQVVGKACPL*TKGFLG
Trigger: ACCCAGGAAACCCTTGGTCCAGAGAGGACAGGCTTT...GCCCACAACTTGGGGGTCCTTTCTGGATCTCGGCTTCTCCAGCTGTAAAATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GGCACTGAATCTCAAATCTTAGTTTCCTGGGTCCCTCCTGGGTTCCTACCACCCAGTTCTTCTCAAGGGTaGGGGCCTCTCCAGAGCATT +
Preference number: 4 (lower is better)
Translates to: GTESQILVSWVPPGFLPPSSSQG*GPLQSI
Trigger: AATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAACT...GGGTGGTAGGAACCCAGGAGGGACCCAGGAAACTAAGATTTGAGATTCAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGCCTGGGAAAGGCCTGTCTaGCTCAAACCTCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GLSRAFGGLRNKDLLGEAWERPV*LKPPFL
Trigger: GAGGAAGGGAGGTTTGAGCCAGACAGGCCTTTCCCA...GGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CCCACCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCTGTCCATTTTACAGCTaGAGAAGCCGAGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: PTERWGSPTEREWDKFTPCPFYS*RSRDPE
Trigger: TTCTGGATCTCGGCTTCTCCAGCTGTAAAATGGACA...GGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp CCTTCCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCATGTTCCGGACCACGTTaGTCCCAAGGGTCTCTCGGA +
Preference number: 4 (lower is better)
Translates to: PSSIPPLYEPEKMFFSVSCSGPR*SQGSLG
Trigger: TCCGAGAGACCCTTGGGATCAACGTGGTCCGGAACA...TGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp TCTGTGTCAGTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTGCTCAGGTCAGGAGTTTaGGACCACCCTGACCAATAT +
Preference number: 4 (lower is better)
Translates to: SVSVLLKGGGLSRAFGGLLRSGV*DHPDQY
Trigger: ATATTGGTCAGGGTGGTCTCAAACTCCTGACCTGAG...CAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAACTGACACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp CCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCAGTTCTGGCTTTCCAAAGCCTaGACGCCAACATGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PLSHLSTSLRKCSSLCQFWLSKA*TPTCWP
Trigger: GGGCCAGCATGTTGGCGTGCAGGCTTTGGAAAGCCA...GAACTGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp TTCAGAGGCACTGAATCTCAAATCTTAGTTTCCTGGGTCCCTCCTGGGTTCCTACGTGGCCAGGAACTCTaGAAACAGCGCCCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: FRGTESQILVSWVPPGFLRGQEL*KQRPAD
Trigger: ATCAGCAGGGCGCTGTTTGCAGAGTTCCTGGCCACG...TAGGAACCCAGGAGGGACCCAGGAAACTAAGATTTGAGATTCAGTGCCTCTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp TCTGAAGGAGGAAATATAGCCCCCAAAACCACACCCAAGGTCAGAGAAACACCCTCTGAGGATTGTTCCTaGCTGAGAGTGGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: SEGGNIAPKTTPKVRETPSEDCS*LRVGCG
Trigger: CCCACAGCCCACTCTCAGGCAGGAACAATCCTCAGA...GGGTGTTTCTCTGACCTTGGGTGTGGTTTTGGGGGCTATATTTCCTCCTTCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCAGTTCGAGCAGCCAGTGAAGTaGATCCCAATGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: PLSHLSTSLRKCSSLCQFEQPVK*IPMRWP
Trigger: GGGCCACCTCATTGGGATCCACTTCACTGGCTGCTC...GAACTGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCACCCAGAAGACCCAGTaGACTGTGAACTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: STAFWGSCNADREPGDGFTQKTQ*TVNFPM
Trigger: CATTGGGAAGTTCACAGTCCACTGGGTCTTCTGGGT...GAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CCTTCCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCAGGACCAAGGGTTTCCTaGGTGGGTAAGAAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PSSIPPLYEPEKMFFSVSGPRVS*VGKKLG
Trigger: CCCCAGCTTCTTACCCACCCAGGAAACCCTTGGTCC...TGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GGGGGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGAAAGCCTGTCCTCTCTaGACCAAGGGTTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GGLSRAFGGLRNKDLLGEKACPL*TKGFLG
Trigger: ACCCAGGAAACCCTTGGTCCAGAGAGGACAGGCTTT...CTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCCCATTCCTTTCTCCCCCAAGACTTGGGCATCTGGGGTCAGGACTCCTACGGGTATTCAACAGCTTTCTaGGGATCCTGTAATGCTGAC +
Preference number: 4 (lower is better)
Translates to: SHSFLPQDLGIWGQDSYGYSTAF*GSCNAD
Trigger: GTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATA...CCCGTAGGAGTCCTGACCCCAGATGCCCAAGTCTTGGGGGAGAAAGGAATGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR GCA 90 bp GTTCCTACCACCCTTAGGGCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTCCAGGAGGTAGAGGTTaGAGTGAGCCGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: VPTTLRAYSTAFWGSCNAPGGRG*SEPRSC
Trigger: GCATGATCTCGGCTCACTGCAACCTCTACCTCCTGG...AGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGTAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp AGAGGCACTGAATCTCAAATCTTAGTTTCCTGGGTCCCTCCTGGGTTCCTACCAACACATACAGCCCCGTaGCCAGGAACTCTGCAAACA +
Preference number: 4 (lower is better)
Translates to: RGTESQILVSWVPPGFLPTHTAP*PGTLQT
Trigger: TGTTTGCAGAGTTCCTGGCCACGGGGCTGTATGTGT...TGGTAGGAACCCAGGAGGGACCCAGGAAACTAAGATTTGAGATTCAGTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCAGTTCTGGATCCCAATGAGGTaGCCCAGTGCCACAGAGATC +
Preference number: 4 (lower is better)
Translates to: PLSHLSTSLRKCSSLCQFWIPMR*PSATEI
Trigger: GATCTCTGTGGCACTGGGCCACCTCATTGGGATCCA...GAACTGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GTTCCTACCACCCTTAGGGCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTTGGATCCCAATGAGGTaGCCCAGTGCCACAGAGATC +
Preference number: 4 (lower is better)
Translates to: VPTTLRAYSTAFWGSCNAWIPMR*PSATEI
Trigger: GATCTCTGTGGCACTGGGCCACCTCATTGGGATCCA...AGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGTAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGCCTACAGAGAGGGAATaGGACAAATTCACTCCCAGA +
Preference number: 4 (lower is better)
Translates to: QLSGDPVMLTESLETASLPTERE*DKFTPR
Trigger: TCTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGG...CAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp CACCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCAGGTCTTTCAGAGGCACTaGATCTCAAATCTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: HREVGKPYREGMGQIHSQVFQRH*ISNLSF
Trigger: GAAACTAAGATTTGAGATTCAGTGCCTCTGAAAGAC...CTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp TCTCAAAACAAACAAAGATCTATTGGTAGAGCAGTCTCTGTCCTCAGGAAGCCCCCCCTCCAGCCCACCTaGTCAGGACAAAAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: SQNKQRSIGRAVSVLRKPPLQPT*SGQKVK
Trigger: CTTGACCTTTTGTCCTGACCAGGTGGGCTGGAGGGG...GGGCTTCCTGAGGACAGAGACTGCTCTACCAATAGATCTTTGTTTGTTTTGAGA
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CCA 90 bp GGGGGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGCAAATCTTAGTTTCCTaGGTCCCTCCTGGGTTCCTA +
Preference number: 4 (lower is better)
Translates to: GGLSRAFGGLRNKDLLGEQILVS*VPPGFL
Trigger: TAGGAACCCAGGAGGGACCCAGGAAACTAAGATTTG...CTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCTTTGTGTCCATTTTACAGCTaGAGAAGCCGAGATCCAGAA +
Preference number: 4 (lower is better)
Translates to: QLSGDPVMLTESLETASLCPFYS*RSRDPE
Trigger: TTCTGGATCTCGGCTTCTCCAGCTGTAAAATGGACA...CAAAGAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp GCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACTTTCACAGCAGTCCCTaGAGGAGGATTGTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AYSTAFWGSCNADREPGDFHSSP*RRIVCP
Trigger: TGGACACACAATCCTCCTCCAGGGACTGCTGTGAAA...GTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp GGGGGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGACCTCTCTACGAGCCTaGGAAAATGTTCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: GGLSRAFGGLRNKDLLGETSLRA*ENVLLC
Trigger: ACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGT...CTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
3UTR CAA 72 bp CGATTTCTTGATTTCACAGCAGTCCCTGGAGGAGGATaGTGTGTCCATTTTACAGCTGGAGAAGCCGAGATC +
Preference number: 4 (lower is better)
Translates to: RFLDFTAVPGGG*CVHFTAGEAEI
Trigger: GATCTCGGCTTCTCCAGCTGTAAAATGGACACACAATCCTCCTCCAGGGACTGCTGTGAAATCAAGAAATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp GCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACACCTCTCTACGAGCCTaGGAAAATGTTCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: AYSTAFWGSCNADREPGDTSLRA*ENVLLC
Trigger: ACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGT...GTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp TCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCGTCTTTCAGAGGCACTaGATCTCAAATCTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: STAFWGSCNADREPGDGFVFQRH*ISNLSF
Trigger: GAAACTAAGATTTGAGATTCAGTGCCTCTGAAAGAC...GAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp GGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGCCTATTTTCCGATTTCTTaGTTTCACAGCAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: GLSRAFGGLRNKDLLGEAYFPIS*FHSSPW
Trigger: CCAGGGACTGCTGTGAAATCAAGAAATCGGAAAATA...GGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CCA 90 bp CCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCAGTTCTCTTCTCTGTTCCTCTaGTCTCTGATCTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PLSHLSTSLRKCSSLCQFSSLFL*SLISCL
Trigger: GAGACAGGAGATCAGAGACCAGAGGAACAGAGAAGA...GAACTGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CCA 90 bp GGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGCCTATTCAACAGCTTTCTaGGGATCCTGTAATGCTGAC +
Preference number: 4 (lower is better)
Translates to: GLSRAFGGLRNKDLLGEAYSTAF*GSCNAD
Trigger: GTCAGCATTACAGGATCCCCAGAAAGCTGTTGAATA...GGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR TCA 90 bp GTTCCTACCACCCTTAGGGCTTATTCAACAGCTTTCTGGGGATCCTGTAATGCTTATTTTCCGATTTCTTaGTTTCACAGCAGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: VPTTLRAYSTAFWGSCNAYFPIS*FHSSPW
Trigger: CCAGGGACTGCTGTGAAATCAAGAAATCGGAAAATA...AGCATTACAGGATCCCCAGAAAGCTGTTGAATAAGCCCTAAGGGTGGTAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS CCA 90 bp ATGTGGGAGCCTACGAGGAAGGCCAGCGTCACGGCGGGGTTGGCGTaGGCCCCGCTGGCCTTCCAGGTGACCTGCACAGCCATGGCGGTG +
Preference number: 5 (lower is better)
Translates to: MWEPTRKASVTAGLA*APLAFQVTCTAMAV
Trigger: CACCGCCATGGCTGTGCAGGTCACCTGGAAGGCCAGCGGGGCCCACGCCAACCCCGCCGTGACGCTGGCCTTCCTCGTAGGCTCCCACAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000615425.1
ENST00000618286.1
CDS GCA 90 bp GGGGACGGGGCTGCATGGCGGCTCCAAGACAGGCACCTCAGCACCTaGCCTGGGCCTTGGAGCCTGAAAGTGCTAAGTGCAGTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: GDGAAWRLQDRHLST*PGPWSLKVLSAVAA
Trigger: GGCTGCCACTGCACTTAGCACTTTCAGGCTCCAAGGCCCAGGGCAGGTGCTGAGGTGCCTGTCTTGGAGCCGCCATGCAGCCCCGTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS-3UTR CAA 90 bp GCCACCCCCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCCACCGCCTGGCCAGTaGAGACACTGTTCCGGACCA +
Preference number: 5 (lower is better)
Translates to: ATPRENLQAGPARQEAQGPPPGQ*RHCSGP
Trigger: TGGTCCGGAACAGTGTCTCAACTGGCCAGGCGGTGG...CCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGGGGGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS GCA 90 bp CCTGCACGCCAACATGCTGGCCCAGCCACGTCCCCCTGGCTCCACTaGATCCATGTCCTGGTGCCTTGGCCGTTCCTTGCCTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: PARQHAGPATSPWLH*IHVLVPWPFLALLW
Trigger: CCAGAGCAAGGCAAGGAACGGCCAAGGCACCAGGACATGGATGCAGTGGAGCCAGGGGGACGTGGCTGGGCCAGCATGTTGGCGTGCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000618286.1
CDS GCA 90 bp TCCGGACCTGGACAGAGGGAGTTACTCTGGACCAGACGCGGGCTCTaGCCACGGACAGACAGAGAAACCCCTGCCACTGGGCCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: SGPGQRELLWTRRGL*PRTDRETPATGPGL
Trigger: GAGACCAGGCCCAGTGGCAGGGGTTTCTCTGTCTGTCCGTGGGCAGAGCCCGCGTCTGGTCCAGAGTAACTCCCTCTGTCCAGGTCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 90 bp CCCCACCCAGGAGCTATCAGGACCACAGGGTGGCTCTGGGACCGCTaGCTGCTTCCCCAGTGCCGACTTGATCTCCCAGGTCTCCCTCAA +
Preference number: 5 (lower is better)
Translates to: PHPGAIRTTGWLWDR*LLPQCRLDLPGLPQ
Trigger: TTGAGGGAGACCTGGGAGATCAAGTCGGCACTGGGGAAGCAGGCAGCGGTCCCAGAGCCACCCTGTGGTCCTGATAGCTCCTGGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 90 bp GCATGGCGGCTCCAAGACAGGCACCTCAGCACCTGCCCTGGGCCTTaGAGCCTGAAAGTGCTAAGTGCAGTGGCAGCCCTTGTCCCCAGC +
Preference number: 5 (lower is better)
Translates to: AWRLQDRHLSTCPGP*SLKVLSAVAALVPS
Trigger: GCTGGGGACAAGGGCTGCCACTGCACTTAGCACTTTCAGGCTCCAAGGCCCAGGGCAGGTGCTGAGGTGCCTGTCTTGGAGCCGCCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 90 bp AGCTCCTCCACCACGCTCCTGTCCCCAGGACTGTGCTGGTCAGACTaGCAGGGCGCAGGCGGATGGGCTTATGCATGTGTATGGGGGTGG +
Preference number: 5 (lower is better)
Translates to: SSSTTLLSPGLCWSD*QGAGGWAYACVWGW
Trigger: CCACCCCCATACACATGCATAAGCCCATCCGCCTGCGCCCTGCCAGTCTGACCAGCACAGTCCTGGGGACAGGAGCGTGGTGGAGGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489786.5
ENST00000618286.1
CDS CCA 90 bp AGCTCCACTGCCACCGCCTGGCCAGTTGAGACACTGTTCCGGACCTaGACAGAGGGAGTTACTCTGGACCAGACGCGGGCTCTGCCCACG +
Preference number: 5 (lower is better)
Translates to: SSTATAWPVETLFRT*TEGVTLDQTRALPT
Trigger: CGTGGGCAGAGCCCGCGTCTGGTCCAGAGTAACTCCCTCTGTCCAGGTCCGGAACAGTGTCTCAACTGGCCAGGCGGTGGCAGTGGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 90 bp TTTCCAAAGCCTGCACGCCAACATGCTGGCCCAGCCACGTCCCCCTaGCTCCACTGCATCCATGTCCTGGTGCCTTGGCCGTTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: FPKPARQHAGPATSP*LHCIHVLVPWPFLA
Trigger: GGCAAGGAACGGCCAAGGCACCAGGACATGGATGCAGTGGAGCCAGGGGGACGTGGCTGGGCCAGCATGTTGGCGTGCAGGCTTTGGAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000618286.1
CDS CCA 90 bp ATGTCGTCACCCCACCCAGGAGCTATCAGGACCACAGGGTGGCTCTaGGACCGCTGCCTGCTTCCCCAGTGCCGACTTGATCTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: MSSPHPGAIRTTGWL*DRCLLPQCRLDLPG
Trigger: ACCTGGGAGATCAAGTCGGCACTGGGGAAGCAGGCAGCGGTCCCAGAGCCACCCTGTGGTCCTGATAGCTCCTGGGTGGGGTGACGACAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS-3UTR CAA 90 bp GTCCCAGGGCCTGATTCCTCCAGAAAGCCTGTCCTCTCTGGACCAAGGGTTTCCCGCTGCGCCAGGGTCTaGGTGTCGGGGAACAGGACG +
Preference number: 5 (lower is better)
Translates to: VPGPDSSRKPVLSGPRVSRCARV*VSGNRT
Trigger: CGTCCTGTTCCCCGACACCAAGACCCTGGCGCAGCG...GGAAACCCTTGGTCCAGAGAGGACAGGCTTTCTGGAGGAATCAGGCCCTGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS TCA 90 bp AGTCTCCTGACCTCTGCCCAGCCTGGGACAAGGTCCTTCACCTCCTaGGGCCAGGTAGCCATTGACCAGGGCTTGCTCCAGGCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: SLLTSAQPGTRSFTS*GQVAIDQGLLQAWL
Trigger: AAGCCAGGCCTGGAGCAAGCCCTGGTCAATGGCTACCTGGCCTCAGGAGGTGAAGGACCTTGTCCCAGGCTGGGCAGAGGTCAGGAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 90 bp CCCAGCTTCAGGACTTCGGGAGGCCTGTGCAGAGGGGTCCATATCTaGTCTGGACCCTTGCTCCCTGCAGAAGTGAGTGGTGCTCCTCCC +
Preference number: 5 (lower is better)
Translates to: PSFRTSGGLCRGVHI*SGPLLPAEVSGAPP
Trigger: GGGAGGAGCACCACTCACTTCTGCAGGGAGCAAGGGTCCAGAGCAGATATGGACCCCTCTGCACAGGCCTCCCGAAGTCCTGAAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 90 bp GGTGACACCTCACTGCCGCCCAGCTTCAGGACTTCGGGAGGCCTGTaGAGAGGGGTCCATATCTGCTCTGGACCCTTGCTCCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: GDTSLPPSFRTSGGL*RGVHICSGPLLPAE
Trigger: TTCTGCAGGGAGCAAGGGTCCAGAGCAGATATGGACCCCTCTGCACAGGCCTCCCGAAGTCCTGAAGCTGGGCGGCAGTGAGGTGTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 90 bp ACCCAGGAGCTATCAGGACCACAGGGTGGCTCTGGGACCGCTGCCTaGTTCCCCAGTGCCGACTTGATCTCCCAGGTCTCCCTCAACTGT +
Preference number: 5 (lower is better)
Translates to: TQELSGPQGGSGTAA*FPSADLISQVSLNC
Trigger: ACAGTTGAGGGAGACCTGGGAGATCAAGTCGGCACTGGGGAAGCAGGCAGCGGTCCCAGAGCCACCCTGTGGTCCTGATAGCTCCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 90 bp CTCCCTGCAGAAGTGAGTGGTGCTCCTCCCACCCCACCAGTGGGTTaGTTGGGGCCAGTGGTTCAGGAGGCTTGCTTGAGAGGAGACTGG +
Preference number: 5 (lower is better)
Translates to: LPAEVSGAPPTPPVG*LGPVVQEACLRGDW
Trigger: CCAGTCTCCTCTCAAGCAAGCCTCCTGAACCACTGGCCCCAACCAACCCACTGGTGGGGTGGGAGGAGCACCACTCACTTCTGCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 90 bp CTTCAGGACTTCGGGAGGCCTGTGCAGAGGGGTCCATATCTGCTCTaGACCCTTGCTCCCTGCAGAAGTGAGTGGTGCTCCTCCCACCCC +
Preference number: 5 (lower is better)
Translates to: LQDFGRPVQRGPYLL*TLAPCRSEWCSSHP
Trigger: GGGGTGGGAGGAGCACCACTCACTTCTGCAGGGAGCAAGGGTCCAGAGCAGATATGGACCCCTCTGCACAGGCCTCCCGAAGTCCTGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS-3UTR CAA 90 bp GCCACCCCCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGATGGCGGTGACCAGGTaGAAGGTGATGGCAATCTGT +
Preference number: 5 (lower is better)
Translates to: ATPRENLQAGPARQEAQGMAVTR*KVMAIC
Trigger: ACAGATTGCCATCACCTTCAACCTGGTCACCGCCAT...CCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGGGGGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CAA 90 bp CCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCGCGGCCGTCCCTGGAGGAGGATaGTGTGTCCATTTTACAGCT +
Preference number: 5 (lower is better)
Translates to: PGRTSRQVLQGRKPKGAAVPGGG*CVHFTA
Trigger: AGCTGTAAAATGGACACACAATCCTCCTCCAGGGAC...GGCCGCGCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS GCA 90 bp GGTCCATATCTGCTCTGGACCCTTGCTCCCTGCAGAAGTGAGTGGTaGTCCTCCCACCCCACCAGTGGGTTGGTTGGGGCCAGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: GPYLLWTLAPCRSEW*SSHPTSGLVGASGS
Trigger: TGAACCACTGGCCCCAACCAACCCACTGGTGGGGTGGGAGGAGCACCACTCACTTCTGCAGGGAGCAAGGGTCCAGAGCAGATATGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 90 bp AGGCCTGTGCAGAGGGGTCCATATCTGCTCTGGACCCTTGCTCCCTaGAGAAGTGAGTGGTGCTCCTCCCACCCCACCAGTGGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: RPVQRGPYLLWTLAP*RSEWCSSHPTSGLV
Trigger: AACCAACCCACTGGTGGGGTGGGAGGAGCACCACTCACTTCTGCAGGGAGCAAGGGTCCAGAGCAGATATGGACCCCTCTGCACAGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 90 bp ATCAGGACCACAGGGTGGCTCTGGGACCGCTGCCTGCTTCCCCAGTaGCGACTTGATCTCCCAGGTCTCCCTCAACTGTCTGTAAGGTGC +
Preference number: 5 (lower is better)
Translates to: IRTTGWLWDRCLLPQ*RLDLPGLPQLSVRC
Trigger: GCACCTTACAGACAGTTGAGGGAGACCTGGGAGATCAAGTCGGCACTGGGGAAGCAGGCAGCGGTCCCAGAGCCACCCTGTGGTCCTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 90 bp GGCCAGTTGAGACACTGTTCCGGACCTGGACAGAGGGAGTTACTCTaGACCAGACGCGGGCTCTGCCCACGGACAGACAGAGAAACCCCT +
Preference number: 5 (lower is better)
Translates to: GQLRHCSGPGQRELL*TRRGLCPRTDRETP
Trigger: AGGGGTTTCTCTGTCTGTCCGTGGGCAGAGCCCGCGTCTGGTCCAGAGTAACTCCCTCTGTCCAGGTCCGGAACAGTGTCTCAACTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS TCA 90 bp GGATGTGGGGGCTGTCTCTGGGCACTGAGCTGGAACCTCCTACGATaGTTTCCAGGGCGGGTTGGGCCTGACTCGTGTTGTAGACAGTCC +
Preference number: 5 (lower is better)
Translates to: GCGGCLWALSWNLLR*FPGRVGPDSCCRQS
Trigger: GGACTGTCTACAACACGAGTCAGGCCCAACCCGCCCTGGAAATCATCGTAGGAGGTTCCAGCTCAGTGCCCAGAGACAGCCCCCACATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 90 bp ATGATTAGGATTGTAACTTCCCTGCCCCCTGCCGTTAGACAGCTGTaGGGACGGGGCTGCATGGCGGCTCCAAGACAGGCACCTCAGCAC +
Preference number: 5 (lower is better)
Translates to: MIRIVTSLPPAVRQL*GRGCMAAPRQAPQH
Trigger: GTGCTGAGGTGCCTGTCTTGGAGCCGCCATGCAGCCCCGTCCCCACAGCTGTCTAACGGCAGGGGGCAGGGAAGTTACAATCCTAATCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 90 bp TGGTCAGACTGGCAGGGCGCAGGCGGATGGGCTTATGCATGTGTATaGGGGTGGAATGAGGGGTGTTGCTCATATGCCTGCTCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: WSDWQGAGGWAYACV*GWNEGCCSYACSSL
Trigger: CAGGCTGGAGCAGGCATATGAGCAACACCCCTCATTCCACCCCCATACACATGCATAAGCCCATCCGCCTGCGCCCTGCCAGTCTGACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000489786.5
ENST00000618286.1
CDS CCA 90 bp TTCTCCAGTGTACAAGTCGGGGTCGGGGGACCCTCCTTGGACTTCTaGCTCCCTTTGAGTGACTGGGACCCTCTCTTGGCCTTTCCCAGT +
Preference number: 5 (lower is better)
Translates to: FSSVQVGVGGPSLDF*LPLSDWDPLLAFPS
Trigger: ACTGGGAAAGGCCAAGAGAGGGTCCCAGTCACTCAAAGGGAGCCAGAAGTCCAAGGAGGGTCCCCCGACCCCGACTTGTACACTGGAGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489786.5
ENST00000551733.5
CDS-3UTR CAA 90 bp CACCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCAGCTGTTCCGGACCACGTaGATCCCAAGGGTCTCTCGG +
Preference number: 5 (lower is better)
Translates to: HREVGKPYREGMGQIHSQLFRTT*IPRVSR
Trigger: CCGAGAGACCCTTGGGATCAACGTGGTCCGGAACAG...CTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CAA 90 bp CCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCGCGGCCGTATTTTCCGATTTCTaGATTTCACAGCAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: PGRTSRQVLQGRKPKGAAVFSDF*ISQQSL
Trigger: CAGGGACTGCTGTGAAATCAAGAAATCGGAAAATAC...GGCCGCGCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS TCA 90 bp GTTCCTTGCCTTGCTCTGGGGCCTCTTCTCTGTTCCTCTGGTCTCTaGTCTCCTGTCTCTTCTGGTGTCCTGTCTCTGGCTGACCCTGGC +
Preference number: 5 (lower is better)
Translates to: VPCLALGPLLCSSGL*SPVSSGVLSLADPG
Trigger: GCCAGGGTCAGCCAGAGACAGGACACCAGAAGAGACAGGAGATCAGAGACCAGAGGAACAGAGAAGAGGCCCCAGAGCAAGGCAAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000618286.1
CDS TCA 90 bp CACAGGGTGGCTCTGGGACCGCTGCCTGCTTCCCCAGTGCCGACTTaGTCTCCCAGGTCTCCCTCAACTGTCTGTAAGGTGCTAAATTTG +
Preference number: 5 (lower is better)
Translates to: HRVALGPLPASPVPT*SPRSPSTVCKVLNL
Trigger: CAAATTTAGCACCTTACAGACAGTTGAGGGAGACCTGGGAGATCAAGTCGGCACTGGGGAAGCAGGCAGCGGTCCCAGAGCCACCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS-3UTR CAA 90 bp CCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCAGATTGGCCGTTCCTTGCCTaGCTCTGGGGCCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: PRGGEALQRGNGTNSLPDWPFLA*LWGLFS
Trigger: AGAGAAGAGGCCCCAGAGCAAGGCAAGGAACGGCCA...ATCTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CAA 90 bp CCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCAGATCCATGTCCTGGTGCCTaGGCCGTTCCTTGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: PRGGEALQRGNGTNSLPDPCPGA*AVPCLA
Trigger: AGCAAGGCAAGGAACGGCCAAGGCACCAGGACATGG...ATCTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CAA 90 bp TCAACAGCTTTCTGGGGATCCTGTAATGCTGACAGAGAGCCTGGAGACGGCTTCCCACCGCCTGGCCAGTaGAGACACTGTTCCGGACCA +
Preference number: 5 (lower is better)
Translates to: STAFWGSCNADREPGDGFPPPGQ*RHCSGP
Trigger: TGGTCCGGAACAGTGTCTCAACTGGCCAGGCGGTGG...GAAGCCGTCTCCAGGCTCTCTGTCAGCATTACAGGATCCCCAGAAAGCTGTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CAA 90 bp GTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAACGCTGCGCCAGGGTCTaGGTGTCGGGGAACAGGACG +
Preference number: 5 (lower is better)
Translates to: VLLKGGGLSRAFGGLRNKRCARV*VSGNRT
Trigger: CGTCCTGTTCCCCGACACCAAGACCCTGGCGCAGCG...TTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CAA 90 bp CCAGGGAGAACCTCCAGGCAGGTCCTGCAAGGCAGGAAGCCCAAGGGCGCGGCCAGAGCATTTGGAGGATaGAGGAATAAAGACCTATTG +
Preference number: 5 (lower is better)
Translates to: PGRTSRQVLQGRKPKGAARAFGG*RNKDLL
Trigger: CAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCT...GGCCGCGCCCTTGGGCTTCCTGCCTTGCAGGACCTGCCTGGAGGTTCTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS GCA 90 bp TCCAATGTCAGCTTAGATACAGCAAGATCACTCAGATCCCCGGCCTaGTTCAGGGGGTCCTGTGCATTCCCAGGTCCTGTTCGTCTGGCC +
Preference number: 5 (lower is better)
Translates to: SNVSLDTARSLRSPA*FRGSCAFPGPVRLA
Trigger: GGCCAGACGAACAGGACCTGGGAATGCACAGGACCCCCTGAAGCAGGCCGGGGATCTGAGTGATCTTGCTGTATCTAAGCTGACATTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS-3UTR CAA 90 bp TCTGTGTCAGTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTGCTGTTCCGGACCACGTaGATCCCAAGGGTCTCTCGG +
Preference number: 5 (lower is better)
Translates to: SVSVLLKGGGLSRAFGGLLFRTT*IPRVSR
Trigger: CCGAGAGACCCTTGGGATCAACGTGGTCCGGAACAG...CAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAACTGACACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CAA 90 bp CACCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCAGAGGAATAAAGACCTATaGGGAGAGGCCGGGCACGGT +
Preference number: 5 (lower is better)
Translates to: HREVGKPYREGMGQIHSQRNKDL*GEAGHG
Trigger: ACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCCT...CTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS TCA 90 bp GAAGAAGGTGGAACACAGATGGTTACGAAATGGAGAAGGGGCGAGTaGGGCAGGCCTCGAGGTGGAGGGAAGAACTTGGGAACAGTCGGA +
Preference number: 5 (lower is better)
Translates to: EEGGTQMVTKWRRGE*GRPRGGGKNLGTVG
Trigger: TCCGACTGTTCCCAAGTTCTTCCCTCCACCTCGAGGCCTGCCTCACTCGCCCCTTCTCCATTTCGTAACCATCTGTGTTCCACCTTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 90 bp CTGGCTTCCTGTCCTAGCCAGCACGTGCCCGAACCCAGCCAGCACTaGGCTCTAGTGCCAAGCTTTAAGCTCATTCATGCTCAAAAACCT +
Preference number: 5 (lower is better)
Translates to: LASCPSQHVPEPSQH*ALVPSFKLIHAQKP
Trigger: AGGTTTTTGAGCATGAATGAGCTTAAAGCTTGGCACTAGAGCCCAGTGCTGGCTGGGTTCGGGCACGTGCTGGCTAGGACAGGAAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS TCA 90 bp CCCTCCTCCACTCCCACCTATACCCGCACTCACAGAATGCAGATGTaGATACAGTCGACTTTACCAAGGACGCTGTGGACACTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: PSSTPTYTRTHRMQM*IQSTLPRTLWTLWP
Trigger: AGGCCACAGTGTCCACAGCGTCCTTGGTAAAGTCGACTGTATTCACATCTGCATTCTGTGAGTGCGGGTATAGGTGGGAGTGGAGGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS TCA 90 bp GTTCGTCTGGCCCCCTCCATATCTAGGCTTTGCTTCCAAATGGGCTaGCACCACACCGTGCCCGTAAACCCAGAAAGTAAGTTCCCTCCT +
Preference number: 5 (lower is better)
Translates to: VRLAPSISRLCFQMG*HHTVPVNPESKFPP
Trigger: AGGAGGGAACTTACTTTCTGGGTTTACGGGCACGGTGTGGTGTCAGCCCATTTGGAAGCAAAGCCTAGATATGGAGGGGGCCAGACGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS-3UTR CAA 90 bp TTCAGAGGCACTGAATCTCAAATCTTAGTTTCCTGGGTCCCTCCTGGGTTCCTATGCCTTGGCCGTTCCTaGCCTTGCTCTGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: FRGTESQILVSWVPPGFLCLGRS*PCSGAS
Trigger: AGAGGCCCCAGAGCAAGGCAAGGAACGGCCAAGGCA...TAGGAACCCAGGAGGGACCCAGGAAACTAAGATTTGAGATTCAGTGCCTCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315520.10
CDS-3UTR CAA 90 bp CCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCAGATATGGCGGTGACCAGGTaGAAGGTGATGGCAATCTGT +
Preference number: 5 (lower is better)
Translates to: PRGGEALQRGNGTNSLPDMAVTR*KVMAIC
Trigger: ACAGATTGCCATCACCTTCAACCTGGTCACCGCCAT...ATCTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CAA 90 bp CCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCAGATCTGGAGACGGCTTCTTaGACCCAGGTCATGAGTCAA +
Preference number: 5 (lower is better)
Translates to: PRGGEALQRGNGTNSLPDLETAS*TQVMSQ
Trigger: TTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAG...ATCTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS TCA 90 bp CCTCATCTCAGTGATCCCCACAAAACCTGGAAAGGTAGGGAGGTCTaGTGTCCTCATCCACACATGACGGAGACACATGAGGCCAAGAGG +
Preference number: 5 (lower is better)
Translates to: PHLSDPHKTWKGREV*CPHPHMTETHEAKR
Trigger: CCTCTTGGCCTCATGTGTCTCCGTCATGTGTGGATGAGGACATCAGACCTCCCTACCTTTCCAGGTTTTGTGGGGATCACTGAGATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS-3UTR CAA 90 bp CCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTCCCAGATGTCCCTGGAGGAGGATaGTGTGTCCATTTTACAGCT +
Preference number: 5 (lower is better)
Translates to: PRGGEALQRGNGTNSLPDVPGGG*CVHFTA
Trigger: AGCTGTAAAATGGACACACAATCCTCCTCCAGGGAC...ATCTGGGAGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CAA 90 bp CTCCCATTCCTTTCTCCCCCAAGACTTGGGCATCTGGGGTCAGGACTCCTACGGACAAACAAAGATCTATaGGTAGAGCAGTCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: LPFLSPPRLGHLGSGLLRTNKDL*VEQSLS
Trigger: GGACAGAGACTGCTCTACCAATAGATCTTTGTTTGT...CCGTAGGAGTCCTGACCCCAGATGCCCAAGTCTTGGGGGAGAAAGGAATGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CAA 90 bp GTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAAGGAATAAAGACCTATaGGGAGAGGCCGGGCACGGT +
Preference number: 5 (lower is better)
Translates to: VLLKGGGLSRAFGGLRNKRNKDL*GEAGHG
Trigger: ACCGTGCCCGGCCTCTCCCAATAGGTCTTTATTCCT...TTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CAA 90 bp GGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGACCTATTGGGAGAGGCCCTGGAGACGGCTTCTTaGACCCAGGTCATGAGTCAA +
Preference number: 5 (lower is better)
Translates to: GLSRAFGGLRNKDLLGEALETAS*TQVMSQ
Trigger: TTGACTCATGACCTGGGTCAAAGAAGCCGTCTCCAG...GGCCTCTCCCAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS GCA 90 bp AGTAAGTTCCCTCCTCCACTCCCACCTATACCCGCACTCACAGAATaGAGATGTGAATACAGTCGACTTTACCAAGGACGCTGTGGACAC +
Preference number: 5 (lower is better)
Translates to: SKFPPPLPPIPALTE*RCEYSRLYQGRCGH
Trigger: GTGTCCACAGCGTCCTTGGTAAAGTCGACTGTATTCACATCTGCATTCTGTGAGTGCGGGTATAGGTGGGAGTGGAGGAGGGAACTTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS-3UTR CAA 90 bp TGTCCCACCGAGAGGTGGGGAAGCCCTACAGAGAGGGAATGGGACAAATTCACTACAAACAAAGATCTATaGGTAGAGCAGTCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: CPTERWGSPTEREWDKFTTNKDL*VEQSLS
Trigger: GGACAGAGACTGCTCTACCAATAGATCTTTGTTTGT...AGTGAATTTGTCCCATTCCCTCTCTGTAGGGCTTCCCCACCTCTCGGTGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS GCA 90 bp GCTCATTCATGCTCAAAAACCTTTTGCCGAGGTTCCTTATCTGGCTaGCTAGGGCTGCCTGTCAATGCAGCTCTGACTGAAGTCCTATTA +
Preference number: 5 (lower is better)
Translates to: AHSCSKTFCRGSLSG*LGLPVNAALTEVLL
Trigger: TAATAGGACTTCAGTCAGAGCTGCATTGACAGGCAGCCCTAGGCAGCCAGATAAGGAACCTCGGCAAAAGGTTTTTGAGCATGAATGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS TCA 90 bp GTAAATGTGCTGATACCTAGGAGAGGGCCTCCAAGTCAGAAAATGTaGATGATTAGGATTGTAACTTCCCTGCCCCCTGCCGTTAGACAG +
Preference number: 5 (lower is better)
Translates to: VNVLIPRRGPPSQKM*MIRIVTSLPPAVRQ
Trigger: CTGTCTAACGGCAGGGGGCAGGGAAGTTACAATCCTAATCATTCACATTTTCTGACTTGGAGGCCCTCTCCTAGGTATCAGCACATTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS-3UTR CAA 90 bp GTTCTTCTCAAGGGTGGGGGCCTCTCCAGAGCATTTGGAGGATTGAGGAATAAAGTATTTTCCGATTTCTaGATTTCACAGCAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: VLLKGGGLSRAFGGLRNKVFSDF*ISQQSL
Trigger: CAGGGACTGCTGTGAAATCAAGAAATCGGAAAATAC...TTTATTCCTCAATCCTCCAAATGCTCTGGAGAGGCCCCCACCCTTGAGAAGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS-3UTR CAA 90 bp CCTCTATCCCACCTCTCTACGAGCCTGAGAAAATGTTCTTCTCTGTGTCAGTTCAGAGCATTTGGAGGATaGAGGAATAAAGACCTATTG +
Preference number: 5 (lower is better)
Translates to: PLSHLSTSLRKCSSLCQFRAFGG*RNKDLL
Trigger: CAATAGGTCTTTATTCCTCAATCCTCCAAATGCTCT...GAACTGACACAGAGAAGAACATTTTCTCAGGCTCGTAGAGAGGTGGGATAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315520.10
ENST00000615425.1
CDS CCA 72 bp CCTACGAGGAAGGCCAGCGTCACGGCGGGGTTGGCGTaGGCCCCGCTGGCCTTCCAGGTGACCTGCACAGCC +
Preference number: 6 (lower is better)
Translates to: PTRKASVTAGLA*APLAFQVTCTA
Trigger: GGCTGTGCAGGTCACCTGGAAGGCCAGCGGGGCCCACGCCAACCCCGCCGTGACGCTGGCCTTCCTCGTAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000615425.1
ENST00000618286.1
CDS CCA 72 bp CCTGCACGCCAACATGCTGGCCCAGCCACGTCCCCCTaGCTCCACTGCATCCATGTCCTGGTGCCTTGGCCG +
Preference number: 6 (lower is better)
Translates to: PARQHAGPATSP*LHCIHVLVPWP
Trigger: CGGCCAAGGCACCAGGACATGGATGCAGTGGAGCCAGGGGGACGTGGCTGGGCCAGCATGTTGGCGTGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000618286.1
CDS GCA 72 bp GGGTTGGCGTGGGCCCCGCTGGCCTTCCAGGTGACCTaGACAGCCATGGCGGTGACCAGGTTGAAGGTGATG +
Preference number: 6 (lower is better)
Translates to: GLAWAPLAFQVT*TAMAVTRLKVM
Trigger: CATCACCTTCAACCTGGTCACCGCCATGGCTGTGCAGGTCACCTGGAAGGCCAGCGGGGCCCACGCCAACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000615425.1
ENST00000618286.1
CDS GCA 72 bp CCACGTCCCCCTGGCTCCACTGCATCCATGTCCTGGTaGCTTGGCCGTTCCTTGCCTTGCTCTGGGGCCTCT +
Preference number: 6 (lower is better)
Translates to: PRPPGSTASMSW*LGRSLPCSGAS
Trigger: AGAGGCCCCAGAGCAAGGCAAGGAACGGCCAAGGCACCAGGACATGGATGCAGTGGAGCCAGGGGGACGTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000618286.1
CDS GCA 72 bp CAACATGCTGGCCCAGCCACGTCCCCCTGGCTCCACTaGATCCATGTCCTGGTGCCTTGGCCGTTCCTTGCC +
Preference number: 6 (lower is better)
Translates to: QHAGPATSPWLH*IHVLVPWPFLA
Trigger: GGCAAGGAACGGCCAAGGCACCAGGACATGGATGCAGTGGAGCCAGGGGGACGTGGCTGGGCCAGCATGTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000618286.1
CDS GCA 72 bp CCCACCTCTACGGTGCCTGTGAGGATAGCCAGCCGCTaGGCCAGGGTCTTGGTGTCGGGGAACAGGACGAAG +
Preference number: 6 (lower is better)
Translates to: PTSTVPVRIASR*ARVLVSGNRTK
Trigger: CTTCGTCCTGTTCCCCGACACCAAGACCCTGGCGCAGCGGCTGGCTATCCTCACAGGCACCGTAGAGGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000551733.5
ENST00000615425.1
CDS GCA 72 bp CACCTGCCCTGGGCCTTGGAGCCTGAAAGTGCTAAGTaGAGTGGCAGCCCTTGTCCCCAGCTAGCTCGGGGC +
Preference number: 6 (lower is better)
Translates to: HLPWALEPESAK*SGSPCPQLARG
Trigger: GCCCCGAGCTAGCTGGGGACAAGGGCTGCCACTGCACTTAGCACTTTCAGGCTCCAAGGCCCAGGGCAGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 72 bp CTGCTCTGGACCCTTGCTCCCTGCAGAAGTGAGTGGTaGTCCTCCCACCCCACCAGTGGGTTGGTTGGGGCC +
Preference number: 6 (lower is better)
Translates to: LLWTLAPCRSEW*SSHPTSGLVGA
Trigger: GGCCCCAACCAACCCACTGGTGGGGTGGGAGGAGCACCACTCACTTCTGCAGGGAGCAAGGGTCCAGAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 72 bp GGACAGAGGGAGTTACTCTGGACCAGACGCGGGCTCTaGCCACGGACAGACAGAGAAACCCCTGCCACTGGG +
Preference number: 6 (lower is better)
Translates to: GQRELLWTRRGL*PRTDRETPATG
Trigger: CCCAGTGGCAGGGGTTTCTCTGTCTGTCCGTGGGCAGAGCCCGCGTCTGGTCCAGAGTAACTCCCTCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 72 bp CTATCAGGACCACAGGGTGGCTCTGGGACCGCTGCCTaGTTCCCCAGTGCCGACTTGATCTCCCAGGTCTCC +
Preference number: 6 (lower is better)
Translates to: LSGPQGGSGTAA*FPSADLISQVS
Trigger: GGAGACCTGGGAGATCAAGTCGGCACTGGGGAAGCAGGCAGCGGTCCCAGAGCCACCCTGTGGTCCTGATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 72 bp GGAGCTATCAGGACCACAGGGTGGCTCTGGGACCGCTaGCTGCTTCCCCAGTGCCGACTTGATCTCCCAGGT +
Preference number: 6 (lower is better)
Translates to: GAIRTTGWLWDR*LLPQCRLDLPG
Trigger: ACCTGGGAGATCAAGTCGGCACTGGGGAAGCAGGCAGCGGTCCCAGAGCCACCCTGTGGTCCTGATAGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 72 bp GCCACCGCCTGGCCAGTTGAGACACTGTTCCGGACCTaGACAGAGGGAGTTACTCTGGACCAGACGCGGGCT +
Preference number: 6 (lower is better)
Translates to: ATAWPVETLFRT*TEGVTLDQTRA
Trigger: AGCCCGCGTCTGGTCCAGAGTAACTCCCTCTGTCCAGGTCCGGAACAGTGTCTCAACTGGCCAGGCGGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CAA 72 bp GTCCCCCTGGCTCCACTGCATCCATGTCCTGGTGCCTaGGCCGTTCCTTGCCTTGCTCTGGGGCCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: VPLAPLHPCPGA*AVPCLALGPLL
Trigger: GAGAAGAGGCCCCAGAGCAAGGCAAGGAACGGCCAAGGCACCAGGACATGGATGCAGTGGAGCCAGGGGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000618286.1
CDS CAA 90 bp GGGCAGCCCTTCTCCAGTGTACAAGTCGGGGTCGGGGGACCCTCCTaGGACTTCTGGCTCCCTTTGAGTGACTGGGACCCTCTCTTGGCC +
Preference number: 6 (lower is better)
Translates to: GQPFSSVQVGVGGPS*DFWLPLSDWDPLLA
Trigger: GGCCAAGAGAGGGTCCCAGTCACTCAAAGGGAGCCAGAAGTCCAAGGAGGGTCCCCCGACCCCGACTTGTACACTGGAGAAGGGCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489786.5
ENST00000551733.5
CDS CAA 90 bp CCTGCAGAAGTGAGTGGTGCTCCTCCCACCCCACCAGTGGGTTGGTaGGGGCCAGTGGTTCAGGAGGCTTGCTTGAGAGGAGACTGGCAG +
Preference number: 6 (lower is better)
Translates to: PAEVSGAPPTPPVGW*GPVVQEACLRGDWQ
Trigger: CTGCCAGTCTCCTCTCAAGCAAGCCTCCTGAACCACTGGCCCCAACCAACCCACTGGTGGGGTGGGAGGAGCACCACTCACTTCTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CAA 90 bp ACTTCGGGAGGCCTGTGCAGAGGGGTCCATATCTGCTCTGGACCCTaGCTCCCTGCAGAAGTGAGTGGTGCTCCTCCCACCCCACCAGTG +
Preference number: 6 (lower is better)
Translates to: TSGGLCRGVHICSGP*LPAEVSGAPPTPPV
Trigger: CACTGGTGGGGTGGGAGGAGCACCACTCACTTCTGCAGGGAGCAAGGGTCCAGAGCAGATATGGACCCCTCTGCACAGGCCTCCCGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS TCA 72 bp ACCTCTGCCCAGCCTGGGACAAGGTCCTTCACCTCCTaGGGCCAGGTAGCCATTGACCAGGGCTTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: TSAQPGTRSFTS*GQVAIDQGLLQ
Trigger: CTGGAGCAAGCCCTGGTCAATGGCTACCTGGCCTCAGGAGGTGAAGGACCTTGTCCCAGGCTGGGCAGAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 72 bp TCACTGCCGCCCAGCTTCAGGACTTCGGGAGGCCTGTaGAGAGGGGTCCATATCTGCTCTGGACCCTTGCTC +
Preference number: 6 (lower is better)
Translates to: SLPPSFRTSGGL*RGVHICSGPLL
Trigger: GAGCAAGGGTCCAGAGCAGATATGGACCCCTCTGCACAGGCCTCCCGAAGTCCTGAAGCTGGGCGGCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 72 bp ACCACGCTCCTGTCCCCAGGACTGTGCTGGTCAGACTaGCAGGGCGCAGGCGGATGGGCTTATGCATGTGTA +
Preference number: 6 (lower is better)
Translates to: TTLLSPGLCWSD*QGAGGWAYACV
Trigger: TACACATGCATAAGCCCATCCGCCTGCGCCCTGCCAGTCTGACCAGCACAGTCCTGGGGACAGGAGCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000618286.1
CDS CCA 72 bp TCCCCCTGGCTCCACTGCATCCATGTCCTGGTGCCTTaGCCGTTCCTTGCCTTGCTCTGGGGCCTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: SPWLHCIHVLVP*PFLALLWGLFS
Trigger: AGAGAAGAGGCCCCAGAGCAAGGCAAGGAACGGCCAAGGCACCAGGACATGGATGCAGTGGAGCCAGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000618286.1
CDS CCA 72 bp GGACTGTGCTGGTCAGACTGGCAGGGCGCAGGCGGATaGGCTTATGCATGTGTATGGGGGTGGAATGAGGGG +
Preference number: 6 (lower is better)
Translates to: GLCWSDWQGAGG*AYACVWGWNEG
Trigger: CCCCTCATTCCACCCCCATACACATGCATAAGCCCATCCGCCTGCGCCCTGCCAGTCTGACCAGCACAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000489786.5
ENST00000618286.1
CDS CAA 72 bp GGCCTGTGCAGAGGGGTCCATATCTGCTCTGGACCCTaGCTCCCTGCAGAAGTGAGTGGTGCTCCTCCCACC +
Preference number: 6 (lower is better)
Translates to: GLCRGVHICSGP*LPAEVSGAPPT
Trigger: GGTGGGAGGAGCACCACTCACTTCTGCAGGGAGCAAGGGTCCAGAGCAGATATGGACCCCTCTGCACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS TCA 72 bp GAGATCCCAATCATGGTGGCCGGGGAGCCTGATGTCTaGCGGCTGTCGGTGGAAGCGAAGACACAGAGCACC +
Preference number: 6 (lower is better)
Translates to: EIPIMVAGEPDV*RLSVEAKTQST
Trigger: GGTGCTCTGTGTCTTCGCTTCCACCGACAGCCGTCAGACATCAGGCTCCCCGGCCACCATGATTGGGATCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000551733.5
ENST00000615425.1
CDS GCA 72 bp CCAGTGGGTTGGTTGGGGCCAGTGGTTCAGGAGGCTTaGTTGAGAGGAGACTGGCAGCAGGTGTGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: PVGWLGPVVQEA*LRGDWQQVWKE
Trigger: CTCCTTCCACACCTGCTGCCAGTCTCCTCTCAAGCAAGCCTCCTGAACCACTGGCCCCAACCAACCCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 72 bp CAGAGGGGTCCATATCTGCTCTGGACCCTTGCTCCCTaGAGAAGTGAGTGGTGCTCCTCCCACCCCACCAGT +
Preference number: 6 (lower is better)
Translates to: QRGPYLLWTLAP*RSEWCSSHPTS
Trigger: ACTGGTGGGGTGGGAGGAGCACCACTCACTTCTGCAGGGAGCAAGGGTCCAGAGCAGATATGGACCCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 72 bp CTCCAAGACAGGCACCTCAGCACCTGCCCTGGGCCTTaGAGCCTGAAAGTGCTAAGTGCAGTGGCAGCCCTT +
Preference number: 6 (lower is better)
Translates to: LQDRHLSTCPGP*SLKVLSAVAAL
Trigger: AAGGGCTGCCACTGCACTTAGCACTTTCAGGCTCCAAGGCCCAGGGCAGGTGCTGAGGTGCCTGTCTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 72 bp GAAGTGAGTGGTGCTCCTCCCACCCCACCAGTGGGTTaGTTGGGGCCAGTGGTTCAGGAGGCTTGCTTGAGA +
Preference number: 6 (lower is better)
Translates to: EVSGAPPTPPVG*LGPVVQEACLR
Trigger: TCTCAAGCAAGCCTCCTGAACCACTGGCCCCAACCAACCCACTGGTGGGGTGGGAGGAGCACCACTCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 72 bp TATCTGCTCTGGACCCTTGCTCCCTGCAGAAGTGAGTaGTGCTCCTCCCACCCCACCAGTGGGTTGGTTGGG +
Preference number: 6 (lower is better)
Translates to: YLLWTLAPCRSE*CSSHPTSGLVG
Trigger: CCCAACCAACCCACTGGTGGGGTGGGAGGAGCACCACTCACTTCTGCAGGGAGCAAGGGTCCAGAGCAGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 72 bp TTCGGGAGGCCTGTGCAGAGGGGTCCATATCTGCTCTaGACCCTTGCTCCCTGCAGAAGTGAGTGGTGCTCC +
Preference number: 6 (lower is better)
Translates to: FGRPVQRGPYLL*TLAPCRSEWCS
Trigger: GGAGCACCACTCACTTCTGCAGGGAGCAAGGGTCCAGAGCAGATATGGACCCCTCTGCACAGGCCTCCCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 72 bp AGACACTGTTCCGGACCTGGACAGAGGGAGTTACTCTaGACCAGACGCGGGCTCTGCCCACGGACAGACAGA +
Preference number: 6 (lower is better)
Translates to: RHCSGPGQRELL*TRRGLCPRTDR
Trigger: TCTGTCTGTCCGTGGGCAGAGCCCGCGTCTGGTCCAGAGTAACTCCCTCTGTCCAGGTCCGGAACAGTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS TCA 72 bp TGCCACAGAGATCCCAATCATGGTGGCCGGGGAGCCTaGTGTCTGACGGCTGTCGGTGGAAGCGAAGACACA +
Preference number: 6 (lower is better)
Translates to: CHRDPNHGGRGA*CLTAVGGSEDT
Trigger: TGTGTCTTCGCTTCCACCGACAGCCGTCAGACATCAGGCTCCCCGGCCACCATGATTGGGATCTCTGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000551733.5
ENST00000615425.1
CDS TCA 72 bp GGCTGTCTCTGGGCACTGAGCTGGAACCTCCTACGATaGTTTCCAGGGCGGGTTGGGCCTGACTCGTGTTGT +
Preference number: 6 (lower is better)
Translates to: GCLWALSWNLLR*FPGRVGPDSCC
Trigger: ACAACACGAGTCAGGCCCAACCCGCCCTGGAAATCATCGTAGGAGGTTCCAGCTCAGTGCCCAGAGACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS TCA 72 bp TCCATATCTGCTCTGGACCCTTGCTCCCTGCAGAAGTaGGTGGTGCTCCTCCCACCCCACCAGTGGGTTGGT +
Preference number: 6 (lower is better)
Translates to: SISALDPCSLQK*VVLLPPHQWVG
Trigger: ACCAACCCACTGGTGGGGTGGGAGGAGCACCACTCACTTCTGCAGGGAGCAAGGGTCCAGAGCAGATATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 72 bp AGGACTTCGGGAGGCCTGTGCAGAGGGGTCCATATCTaGTCTGGACCCTTGCTCCCTGCAGAAGTGAGTGGT +
Preference number: 6 (lower is better)
Translates to: RTSGGLCRGVHI*SGPLLPAEVSG
Trigger: ACCACTCACTTCTGCAGGGAGCAAGGGTCCAGAGCAGATATGGACCCCTCTGCACAGGCCTCCCGAAGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 72 bp GGCGCAGGCGGATGGGCTTATGCATGTGTATGGGGGTaGAATGAGGGGTGTTGCTCATATGCCTGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GAGGWAYACVWG*NEGCCSYACSS
Trigger: GCTGGAGCAGGCATATGAGCAACACCCCTCATTCCACCCCCATACACATGCATAAGCCCATCCGCCTGCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489786.5
ENST00000618286.1
CDS CAA 72 bp TTCTCCAGTGTACAAGTCGGGGTCGGGGGACCCTCCTaGGACTTCTGGCTCCCTTTGAGTGACTGGGACCCT +
Preference number: 6 (lower is better)
Translates to: FSSVQVGVGGPS*DFWLPLSDWDP
Trigger: AGGGTCCCAGTCACTCAAAGGGAGCCAGAAGTCCAAGGAGGGTCCCCCGACCCCGACTTGTACACTGGAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489786.5
ENST00000551733.5
CDS TCA 72 bp GGTCTGATGTCCTCATCCACACATGACGGAGACACATaGGGCCAAGAGGAGCGGAGAGACCTGGTCCTCCCA +
Preference number: 6 (lower is better)
Translates to: GLMSSSTHDGDT*GQEERRDLVLP
Trigger: TGGGAGGACCAGGTCTCTCCGCTCCTCTTGGCCTCATGTGTCTCCGTCATGTGTGGATGAGGACATCAGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS TCA 72 bp TTCTTCCCTATAAACGTGCCTGAGTCTCCTGGAGACTaGGCGGAGAAGGGCTCCCCTCTCTTCTGCGCCCCA +
Preference number: 6 (lower is better)
Translates to: FFPINVPESPGD*AEKGSPLFCAP
Trigger: TGGGGCGCAGAAGAGAGGGGAGCCCTTCTCCGCTCAGTCTCCAGGAGACTCAGGCACGTTTATAGGGAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551733.5
CDS TCA 72 bp AGGCGGATGGGCTTATGCATGTGTATGGGGGTGGAATaGGGGGTGTTGCTCATATGCCTGCTCCAGCCTGAG +
Preference number: 6 (lower is better)
Translates to: RRMGLCMCMGVE*GVLLICLLQPE
Trigger: CTCAGGCTGGAGCAGGCATATGAGCAACACCCCTCATTCCACCCCCATACACATGCATAAGCCCATCCGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000489786.5
ENST00000618286.1
CDS TCA 72 bp GGAACACAGATGGTTACGAAATGGAGAAGGGGCGAGTaGGGCAGGCCTCGAGGTGGAGGGAAGAACTTGGGA +
Preference number: 6 (lower is better)
Translates to: GTQMVTKWRRGE*GRPRGGGKNLG
Trigger: TCCCAAGTTCTTCCCTCCACCTCGAGGCCTGCCTCACTCGCCCCTTCTCCATTTCGTAACCATCTGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 72 bp TGTCCTAGCCAGCACGTGCCCGAACCCAGCCAGCACTaGGCTCTAGTGCCAAGCTTTAAGCTCATTCATGCT +
Preference number: 6 (lower is better)
Translates to: CPSQHVPEPSQH*ALVPSFKLIHA
Trigger: AGCATGAATGAGCTTAAAGCTTGGCACTAGAGCCCAGTGCTGGCTGGGTTCGGGCACGTGCTGGCTAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 72 bp TCAGGGGGTCCTGTGCATTCCCAGGTCCTGTTCGTCTaGCCCCCTCCATATCTAGGCTTTGCTTCCAAATGG +
Preference number: 6 (lower is better)
Translates to: SGGPVHSQVLFV*PPPYLGFASKW
Trigger: CCATTTGGAAGCAAAGCCTAGATATGGAGGGGGCCAGACGAACAGGACCTGGGAATGCACAGGACCCCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CAA 72 bp TTCCAGGTGACCTGCACAGCCATGGCGGTGACCAGGTaGAAGGTGATGGCAATCTGTAGCACGGAGGGAAGT +
Preference number: 6 (lower is better)
Translates to: FQVTCTAMAVTR*KVMAICSTEGS
Trigger: ACTTCCCTCCGTGCTACAGATTGCCATCACCTTCAACCTGGTCACCGCCATGGCTGTGCAGGTCACCTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000615425.1
ENST00000618286.1
CDS TCA 72 bp GGAAAGGTAGGGAGGTCTGATGTCCTCATCCACACATaGCGGAGACACATGAGGCCAAGAGGAGCGGAGAGA +
Preference number: 6 (lower is better)
Translates to: GKVGRSDVLIHT*RRHMRPRGAER
Trigger: TCTCTCCGCTCCTCTTGGCCTCATGTGTCTCCGTCATGTGTGGATGAGGACATCAGACCTCCCTACCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CCA 72 bp TCCTTGCCTTGCTCTGGGGCCTCTTCTCTGTTCCTCTaGTCTCTGATCTCCTGTCTCTTCTGGTGTCCTGTC +
Preference number: 6 (lower is better)
Translates to: SLPCSGASSLFL*SLISCLFWCPV
Trigger: GACAGGACACCAGAAGAGACAGGAGATCAGAGACCAGAGGAACAGAGAAGAGGCCCCAGAGCAAGGCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000315520.10
ENST00000489786.5
ENST00000618286.1
CDS TCA 72 bp GCCCCCTCCATATCTAGGCTTTGCTTCCAAATGGGCTaGCACCACACCGTGCCCGTAAACCCAGAAAGTAAG +
Preference number: 6 (lower is better)
Translates to: APSISRLCFQMG*HHTVPVNPESK
Trigger: CTTACTTTCTGGGTTTACGGGCACGGTGTGGTGTCAGCCCATTTGGAAGCAAAGCCTAGATATGGAGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 72 bp CCTCCTCCACTCCCACCTATACCCGCACTCACAGAATaGAGATGTGAATACAGTCGACTTTACCAAGGACGC +
Preference number: 6 (lower is better)
Translates to: PPPLPPIPALTE*RCEYSRLYQGR
Trigger: GCGTCCTTGGTAAAGTCGACTGTATTCACATCTGCATTCTGTGAGTGCGGGTATAGGTGGGAGTGGAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS TCA 72 bp AGTGATCCCCACAAAACCTGGAAAGGTAGGGAGGTCTaGTGTCCTCATCCACACATGACGGAGACACATGAG +
Preference number: 6 (lower is better)
Translates to: SDPHKTWKGREV*CPHPHMTETHE
Trigger: CTCATGTGTCTCCGTCATGTGTGGATGAGGACATCAGACCTCCCTACCTTTCCAGGTTTTGTGGGGATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS CAA 72 bp CCCAGGTCTCCCTCAACTGTCTGTAAGGTGCTAAATTaGAGAACCACGAGTCGTGTTTCCCAAGCCCACAAG +
Preference number: 6 (lower is better)
Translates to: PRSPSTVCKVLN*RTTSRVSQAHK
Trigger: CTTGTGGGCTTGGGAAACACGACTCGTGGTTCTCAAATTTAGCACCTTACAGACAGTTGAGGGAGACCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS TCA 72 bp ACTCCCACCTATACCCGCACTCACAGAATGCAGATGTaGATACAGTCGACTTTACCAAGGACGCTGTGGACA +
Preference number: 6 (lower is better)
Translates to: TPTYTRTHRMQM*IQSTLPRTLWT
Trigger: TGTCCACAGCGTCCTTGGTAAAGTCGACTGTATTCACATCTGCATTCTGTGAGTGCGGGTATAGGTGGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489786.5
CDS GCA 72 bp TGTGAACACTGCCATGTGTATTGCACCCTAAGCAGTTaGTTAACCTCAAGATCCTCATTTATGCAGTGGGGA +
Preference number: 6 (lower is better)
Translates to: CEHCHVYCTLSS*LTSRSSFMQWG
Trigger: TCCCCACTGCATAAATGAGGATCTTGAGGTTAAGCAACTGCTTAGGGTGCAATACACATGGCAGTGTTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489786.5