RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AQP4 (Homo sapiens)

Ensembl gene IDs: ENSG00000171885

Ensembl transcript IDs: ENST00000383168.9, ENST00000383170.3, ENST00000440832.7, ENST00000578776.1, ENST00000581374.5, ENST00000583022.5, ENST00000584088.1, ENST00000672188.1, ENST00000672981.2, ENST00000675739.1

Found 504 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACTGGCGCAGTGTGTGGTGTGGCCACGCCCCCTGAGAAAGGGGCCTaGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATA +
Preference number: 1 (lower is better)
Translates to: TGAVCGVATPPEKGA*DLGTCGMPVALPGI
Trigger: TATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCTTTCTCAGGGGGCGTGGCCACACCACACACTGCGCCAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 90 bp GTAACTATGTGTCACTGGCGCAGTGTGTGGTGTGGCCACGCCCCCTaGGAAAGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGC +
Preference number: 1 (lower is better)
Translates to: VTMCHWRSVWCGHAP*ERGLGFRHLRYASG
Trigger: GCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCTTTCTCAGGGGGCGTGGCCACACCACACACTGCGCCAGTGACACATAGTTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 90 bp GGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACACTGGTGTaGCGACTCTCTGGGAATCTCACACATCACTCTTTCCTAGCACCG +
Preference number: 1 (lower is better)
Translates to: GTCGMPVALPGITLV*RLSGNLTHHSFLAP
Trigger: CGGTGCTAGGAAAGAGTGATGTGTGAGATTCCCAGAGAGTCGTCACACCAGTGTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR GCA 90 bp CGGTGCAAACCATCTTTGGGAGATTTGTACCCTAGTTTCTATAGGTaGCGTCCCAGCCAGGAAGTAACTATGTGTCACTGGCGCAGTGTG +
Preference number: 1 (lower is better)
Translates to: RCKPSLGDLYPSFYR*RPSQEVTMCHWRSV
Trigger: CACACTGCGCCAGTGACACATAGTTACTTCCTGGCTGGGACGGCACCTATAGAAACTAGGGTACAAATCTCCCAAAGATGGTTTGCACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR CCA 90 bp TATGCCAGTGGCACTCCCAGGCATAACACTGGTGTGACGACTCTCTaGGAATCTCACACATCACTCTTTCCTAGCACCGAAGAGAATCAG +
Preference number: 1 (lower is better)
Translates to: YASGTPRHNTGVTTL*ESHTSLFPSTEENQ
Trigger: CTGATTCTCTTCGGTGCTAGGAAAGAGTGATGTGTGAGATTCCCAGAGAGTCGTCACACCAGTGTTATGCCTGGGAGTGCCACTGGCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 90 bp TTATCTCACTGCCACAGACACACAACTGCCATTAACGCTAAAAAGTaGCACAGAGTTGGAACCATGCTTGAGAGAAGACAGCCCTTGATC +
Preference number: 1 (lower is better)
Translates to: LSHCHRHTTAINAKK*HRVGTMLERRQPLI
Trigger: GATCAAGGGCTGTCTTCTCTCAAGCATGGTTCCAACTCTGTGTCACTTTTTAGCGTTAATGGCAGTTGTGTGTCTGTGGCAGTGAGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 90 bp CTTCAGTTGCCACAAAGGCAAATTCTCTGTGAATTGTTCGTAACGTaGGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTC +
Preference number: 1 (lower is better)
Translates to: LQLPQRQILCELFVT*GWCQHAAIRGLLGF
Trigger: GAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAATTCACAGAGAATTTGCCTTTGTGGCAACTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 90 bp AGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTCTAGAGTaGACACAGCTTAATAATCAACAAAAAGCCAGGACTCAACTAGCT +
Preference number: 1 (lower is better)
Translates to: SERAEIGTGPLHLLE*TQLNNQQKARTQLA
Trigger: AGCTAGTTGAGTCCTGGCTTTTTGTTGATTATTAAGCTGTGTTCACTCTAGAAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 90 bp ATCATTACACTTGCAGTAAAGATTATCAACAAATGTCACGAGAAGTaGGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTCTAGAGTG +
Preference number: 1 (lower is better)
Translates to: IITLAVKIINKCHEK*ESRDWDRAFTPSRV
Trigger: CACTCTAGAAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGTTGATAATCTTTACTGCAAGTGTAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 90 bp AAAAGTGACACAGAGTTGGAACCATGCTTGAGAGAAGACAGCCCTTaGTCATCAGTTATTTACAAGTCACTCCTTGCAGTGATAGGTTTC +
Preference number: 1 (lower is better)
Translates to: KSDTELEPCLREDSP*SSVIYKSLLAVIGF
Trigger: GAAACCTATCACTGCAAGGAGTGACTTGTAAATAACTGATGATCAAGGGCTGTCTTCTCTCAAGCATGGTTCCAACTCTGTGTCACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR CCA 90 bp GTACTTGTACTCTTCCTTAGGGAAGAGACAGTTGGCATTGTTTCATaGCTGGGTATAATTCATTTATGTCTTCCCAGTTTTTCCTCTCTG +
Preference number: 1 (lower is better)
Translates to: VLVLFLREETVGIVS*LGIIHLCLPSFSSL
Trigger: CAGAGAGGAAAAACTGGGAAGACATAAATGAATTATACCCAGCCATGAAACAATGCCAACTGTCTCTTCCCTAAGGAAGAGTACAAGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 90 bp GCTACAATATATCCAGAAATGAAAGATTGTTCGTCTAGTAAGCTTTaGATACAGAGTGATCTGATGTCCTCACCCTTTTATTCTGCAACC +
Preference number: 1 (lower is better)
Translates to: ATIYPEMKDCSSSKL*IQSDLMSSPFYSAT
Trigger: GGTTGCAGAATAAAAGGGTGAGGACATCAGATCACTCTGTATTCAAAGCTTACTAGACGAACAATCTTTCATTTCTGGATATATTGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR CCA 90 bp GGCCTTCTAGGATTCATCTTACCATTTGAATTTACTGCTCTAGTTTaGAATTTTCCTGTCATTATCGAGTTTAAACCAATACATGTGTTG +
Preference number: 1 (lower is better)
Translates to: GLLGFILPFEFTALV*NFPVIIEFKPIHVL
Trigger: CAACACATGTATTGGTTTAAACTCGATAATGACAGGAAAATTCCAAACTAGAGCAGTAAATTCAAATGGTAAGATGAATCCTAGAAGGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp AACCAGGAGACCATGACCAGCGGTAAGATTTCCATGAACCATGGTGACTCCCAGCCACACTGGGAGGTGTaGCCAGATAGAGGATTCCTG +
Preference number: 2 (lower is better)
Translates to: NQETMTSGKISMNHGDSQPHWEV*PDRGFL
Trigger: CAGGAATCCTCTATCTGGTCACACCTCCCAGTGTGG...CTGGGAGTCACCATGGTTCATGGAAATCTTACCGCTGGTCATGGTCTCCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383170.3
3UTR-3UTR TCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACAACAGATCAACCGTTTaGTACCCGAATACAGATCTC +
Preference number: 2 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNNRSTV*YPNTDL
Trigger: GAGATCTGTATTCGGGTATCAAACGGTTGATCTGTT...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCATGGGATTTAGGCACCTaGGGTATGCCAGTGGCACTC +
Preference number: 2 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSWDLGT*GMPVAL
Trigger: GAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCA...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACGAATACAGAGTGATCTaGTGTCCTCACCCTTTTATT +
Preference number: 2 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNEYRVI*CPHPFI
Trigger: AATAAAAGGGTGAGGACATCAGATCACTCTGTATTC...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACTTGAATCTCAATAGGTaGCCTTATGATTTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNLNLNR*PYDLGR
Trigger: CCTTCCCAAATCATAAGGGCACCTATTGAGATTCAA...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAGTAACTATGTGTCACTaGCGCAGTGTGTGGTGTGGC +
Preference number: 2 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSVTMCH*RSVWCG
Trigger: GCCACACCACACACTGCGCCAGTGACACATAGTTAC...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACGACTTAACCAAATCTTaGCACACGGTTAAAATTGGT +
Preference number: 2 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNDLTKS*HTVKIG
Trigger: ACCAATTTTAACCGTGTGTCAAGATTTGGTTAAGTC...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCACTGGTGTGGTGCATTTaGGGGTGTGCACTGAAAACA +
Preference number: 2 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSLVWCI*GCALKT
Trigger: TGTTTTCAGTGCACACCCTCAAATGCACCACACCAG...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGTGGGATTTAGGCACCTaGGGTATGCCAGTGGCACTC +
Preference number: 2 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRWDLGT*GMPVAL
Trigger: GAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCA...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAGGTGTGACGACTCTCTaGGAATCTCACACATCACTC +
Preference number: 2 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSGVTTL*ESHTSL
Trigger: GAGTGATGTGTGAGATTCCCAGAGAGTCGTCACACC...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAAGTTGGAACCATGCTTaGGAGAAGACAGCCCTTGAT +
Preference number: 2 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSSWNHA*EKTALD
Trigger: ATCAAGGGCTGTCTTCTCTCAAGCATGGTTCCAACT...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTGGCATAACACTGGTGTaGCGACTCTCTGGGAATCTC +
Preference number: 2 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIGITLV*RLSGNL
Trigger: GAGATTCCCAGAGAGTCGTCACACCAGTGTTATGCC...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTTGTATCTGTCAGCAGTaGTCTCCTGGGAGCAGCACT +
Preference number: 2 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRICICQQ*SPGSST
Trigger: AGTGCTGCTCCCAGGAGACCACTGCTGACAGATACA...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGTGTATCTGTCAGCAGTaGTCTCCTGGGAGCAGCACT +
Preference number: 2 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRCICQQ*SPGSST
Trigger: AGTGCTGCTCCCAGGAGACCACTGCTGACAGATACA...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAACTGGTGTGGTGCATTTaGGGGTGTGCACTGAAAACA +
Preference number: 2 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQLVWCI*GCALKT
Trigger: TGTTTTCAGTGCACACCCTCAAATGCACCACACCAG...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTGGTCCATTATCTCACTaGCACAGACACACAACTGCC +
Preference number: 2 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIGPLSH*HRHTTA
Trigger: GGCAGTTGTGTGTCTGTGGCAGTGAGATAATGGACC...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAGGTGTGACGACTCTCTaGGAATCTCACACATCACTC +
Preference number: 2 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQGVTTL*ESHTSL
Trigger: GAGTGATGTGTGAGATTCCCAGAGAGTCGTCACACC...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGCGAGTCTGCTTGTCTTaGATCTCAATAGGTGCCCTT +
Preference number: 2 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRRVCLS*ISIGAL
Trigger: AAGGGCACCTATTGAGATTCAAGACAAGCAGACTCG...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAACGAGTCTGCTTGTCTTaGATCTCAATAGGTGCCCTT +
Preference number: 2 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQRVCLS*ISIGAL
Trigger: AAGGGCACCTATTGAGATTCAAGACAAGCAGACTCG...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAAGTTGGAACCATGCTTaGGAGAAGACAGCCCTTGAT +
Preference number: 2 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQSWNHA*EKTALD
Trigger: ATCAAGGGCTGTCTTCTCTCAAGCATGGTTCCAACT...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAACTTGGATAATTTGGTaGCATCCACAAGGCGATAGA +
Preference number: 2 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSTWIIW*HPQGDR
Trigger: TCTATCGCCTTGTGGATGGCACCAAATTATCCAAGT...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAGGTGCAAACCATCTTTaGGAGATTTGTACCCTAGTT +
Preference number: 2 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSGANHL*EICTLV
Trigger: AACTAGGGTACAAATCTCCCAAAGATGGTTTGCACC...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCATACACTTGGATAATTTaGTGCCATCCACAAGGCGAT +
Preference number: 2 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSYTWII*CHPQGD
Trigger: ATCGCCTTGTGGATGGCACCAAATTATCCAAGTGTA...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCTCAGCAGTGGTCTCCTaGGAGCAGCACTATGCACTT +
Preference number: 2 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSSAVVS*EQHYAL
Trigger: AAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGA...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATTACCTTGGGCATTaGGGAGGAAGAAATACCATG +
Preference number: 2 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIHYLGH*GGRNTM
Trigger: CATGGTATTTCTTCCTCCTCAATGCCCAAGGTAATG...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGGTGCATTTGAGGGTGTaGACTGAAAACAGATCAACC +
Preference number: 2 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRVHLRV*TENRST
Trigger: GGTTGATCTGTTTTCAGTGCACACCCTCAAATGCAC...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCACTCACCCTTTTATTCTaGAACCATGTTGTACCTTGT +
Preference number: 2 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSLTLLF*NHVVPC
Trigger: ACAAGGTACAACATGGTTGCAGAATAAAAGGGTGAG...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTAACAGATCAACCGTTTaGTACCCGAATACAGATCTC +
Preference number: 2 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRINRSTV*YPNTDL
Trigger: GAGATCTGTATTCGGGTATCAAACGGTTGATCTGTT...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCATATTGTGCAAACATTTaGAATGACGGTGCAAACCAT +
Preference number: 2 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSYCANI*NDGANH
Trigger: ATGGTTTGCACCGTCATTTCAAATGTTTGCACAATA...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGCTGGGAGCAGCACTATaGACTTCATTAATAAGAAGG +
Preference number: 2 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRLGAAL*TSLIRR
Trigger: CCTTCTTATTAATGAAGTGCATAGTGCTGCTCCCAG...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTACCTGAGAAAGGGGCCTaGGATTTAGGCACCTGCGGT +
Preference number: 2 (lower is better)
Translates to: QAIGSHLQRWPQFLILELPEKGA*DLGTCG
Trigger: ACCGCAGGTGCCTAAATCCCAGGCCCCTTTCTCAGG...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGGGTGCAAACCATCTTTaGGAGATTTGTACCCTAGTT +
Preference number: 2 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRGANHL*EICTLV
Trigger: AACTAGGGTACAAATCTCCCAAAGATGGTTTGCACC...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCCATTACCTTGGGCATTaGGGAGGAAGAAATACCATG +
Preference number: 2 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSHYLGH*GGRNTM
Trigger: CATGGTATTTCTTCCTCCTCAATGCCCAAGGTAATG...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTTCGTCTAGTAAGCTTTaGATACAGAGTGATCTGATG +
Preference number: 2 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRISSSKL*IQSDLM
Trigger: CATCAGATCACTCTGTATTCAAAGCTTACTAGACGA...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGAGAGAAGACAGCCCTTaGTCATCAGTTATTTACAAG +
Preference number: 2 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRREDSP*SSVIYK
Trigger: CTTGTAAATAACTGATGATCAAGGGCTGTCTTCTCT...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTTTGAATCTCAATAGGTaGCCTTATGATTTGGGAAGG +
Preference number: 2 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRILNLNR*PYDLGR
Trigger: CCTTCCCAAATCATAAGGGCACCTATTGAGATTCAA...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCGTGCATTTGAGGGTGTaGACTGAAAACAGATCAACC +
Preference number: 2 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSVHLRV*TENRST
Trigger: GGTTGATCTGTTTTCAGTGCACACCCTCAAATGCAC...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGTTACAAGTCACTCCTTaGAGTGATAGGTTTCTGCTT +
Preference number: 2 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRLQVTP*SDRFLL
Trigger: AAGCAGAAACCTATCACTGCAAGGAGTGACTTGTAA...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGAGTCCCACATTACCTTaGGCATTGAGGAGGAAGAAA +
Preference number: 2 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRSPTLP*ALRRKK
Trigger: TTTCTTCCTCCTCAATGCCCAAGGTAATGTGGGACT...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGGACTTAACCAAATCTTaGCACACGGTTAAAATTGGT +
Preference number: 2 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRDLTKS*HTVKIG
Trigger: ACCAATTTTAACCGTGTGTCAAGATTTGGTTAAGTC...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTCTGGTGTGGTGCATTTaGGGGTGTGCACTGAAAACA +
Preference number: 2 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFLVWCI*GCALKT
Trigger: TGTTTTCAGTGCACACCCTCAAATGCACCACACCAG...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAGGCATAACACTGGTGTaGCGACTCTCTGGGAATCTC +
Preference number: 2 (lower is better)
Translates to: QAIGSHLQRWPQFLILELGITLV*RLSGNL
Trigger: GAGATTCCCAGAGAGTCGTCACACCAGTGTTATGCC...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGTTACTGGCAGAGCCTTaGGTGAAATACAAAATATGT +
Preference number: 2 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRLLAEP*VKYKIC
Trigger: ACATATTTTGTATTTCACTCAAGGCTCTGCCAGTAA...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTCCTAGTTTCTATAGGTaGCGTCCCAGCCAGGAAGTA +
Preference number: 2 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFPSFYR*RPSQEV
Trigger: TACTTCCTGGCTGGGACGGCACCTATAGAAACTAGG...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCTCGTCTAGTAAGCTTTaGATACAGAGTGATCTGATG +
Preference number: 2 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSSSSKL*IQSDLM
Trigger: CATCAGATCACTCTGTATTCAAAGCTTACTAGACGA...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCAGAGAAGACAGCCCTTaGTCATCAGTTATTTACAAG +
Preference number: 2 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSREDSP*SSVIYK
Trigger: CTTGTAAATAACTGATGATCAAGGGCTGTCTTCTCT...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTGCAGTGATAGGTTTCTaGTTTACTTCTAATAGCTTT +
Preference number: 2 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIAVIGF*FTSNSF
Trigger: AAAGCTATTAGAAGTAAAGCAGAAACCTATCACTGC...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGGCAGTGATAGGTTTCTaGTTTACTTCTAATAGCTTT +
Preference number: 2 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRAVIGF*FTSNSF
Trigger: AAAGCTATTAGAAGTAAAGCAGAAACCTATCACTGC...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTGTAACTGATGAGCAGTaGCACTTGCTAATGCTCTTT +
Preference number: 2 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSVTDEQ*HLLMLF
Trigger: AAAGAGCATTAGCAAGTGTCACTGCTCATCAGTTAC...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTCATTACCTTGGGCATTaGGGAGGAAGAAATACCATG +
Preference number: 2 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFHYLGH*GGRNTM
Trigger: CATGGTATTTCTTCCTCCTCAATGCCCAAGGTAATG...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTGCTTTGAATACAGAGTaGTCTGATGTCCTCACCCTT +
Preference number: 2 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFALNTE*SDVLTL
Trigger: AAGGGTGAGGACATCAGATCACTCTGTATTCAAAGC...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCTATTGTGCAAACATTTaGAATGACGGTGCAAACCAT +
Preference number: 2 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSYCANI*NDGANH
Trigger: ATGGTTTGCACCGTCATTTCAAATGTTTGCACAATA...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGTTGCTAATGCTCTTTTaGCAAGGTAGTCTATGCATA +
Preference number: 2 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRLLMLF*QGSLCI
Trigger: TATGCATAGACTACCTTGGCAAAAGAGCATTAGCAA...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCGGTGCCCTTATGATTTaGGAAGGATTTCTGAATATT +
Preference number: 2 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSGALMI*EGFLNI
Trigger: AATATTCAGAAATCCTTCCCAAATCATAAGGGCACC...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR CAA 90 bp ATAACTTTGCCTCTGCCTCTACAAGATTTTACGAGTCTGCTTGTCTaGAATCTCAATAGGTGCCCTTATGATTTGGGAAGGATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: ITLPLPLQDFTSLLV*NLNRCPYDLGRISE
Trigger: TTCAGAAATCCTTCCCAAATCATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGGCAGAGGCAAAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTGAATACAGAGTGATCTaGTGTCCTCACCCTTTTATT +
Preference number: 2 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSEYRVI*CPHPFI
Trigger: AATAAAAGGGTGAGGACATCAGATCACTCTGTATTC...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAGCTTTGAATACAGAGTaGTCTGATGTCCTCACCCTT +
Preference number: 2 (lower is better)
Translates to: QAIGSHLQRWPQFLILELALNTE*SDVLTL
Trigger: AAGGGTGAGGACATCAGATCACTCTGTATTCAAAGC...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTTCGTCTAGTAAGCTTTaGATACAGAGTGATCTGATG +
Preference number: 2 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSSSSKL*IQSDLM
Trigger: CATCAGATCACTCTGTATTCAAAGCTTACTAGACGA...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAACTAGACAGTTAAGATaGCAGAAACTGGGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: QAIGSHLQRWPQFLILELTRQLR*QKLGFL
Trigger: CAGAAACCCCAGTTTCTGTCATCTTAACTGTCTAGT...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTATTAACGCTAAAAAGTaGCACAGAGTTGGAACCATG +
Preference number: 2 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFINAKK*HRVGTM
Trigger: CATGGTTCCAACTCTGTGTCACTTTTTAGCGTTAAT...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAACTTGGATAATTTGGTaGCATCCACAAGGCGATAGA +
Preference number: 2 (lower is better)
Translates to: QAIGSHLQRWPQFLILELTWIIW*HPQGDR
Trigger: TCTATCGCCTTGTGGATGGCACCAAATTATCCAAGT...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAATTAACGCTAAAAAGTaGCACAGAGTTGGAACCATG +
Preference number: 2 (lower is better)
Translates to: QAIGSHLQRWPQFLILELINAKK*HRVGTM
Trigger: CATGGTTCCAACTCTGTGTCACTTTTTAGCGTTAAT...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTATGCAAACATTTGAAATaGCGGTGCAAACCATCTTTG +
Preference number: 2 (lower is better)
Translates to: QAIGSHLQRWPQFLILELCKHLK*RCKPSL
Trigger: CAAAGATGGTTTGCACCGTCATTTCAAATGTTTGCA...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTTTGCTAATGCTCTTTTaGCAAGGTAGTCTATGCATA +
Preference number: 2 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFLLMLF*QGSLCI
Trigger: TATGCATAGACTACCTTGGCAAAAGAGCATTAGCAA...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAAGTTTCAAAAGCTACTaGTCTTATGGGGCAATCTGT +
Preference number: 2 (lower is better)
Translates to: QAIGSHLQRWPQFLILELSFKSY*SYGAIC
Trigger: ACAGATTGCCCCATAAGAGCAGTAGCTTTTGAAACT...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTATATTGTGCAAACATTTaGAATGACGGTGCAAACCAT +
Preference number: 2 (lower is better)
Translates to: QAIGSHLQRWPQFLILELYCANI*NDGANH
Trigger: ATGGTTTGCACCGTCATTTCAAATGTTTGCACAATA...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAAATGGAAACATACATTaGAATTCTGGTCCCCAAGTT +
Preference number: 2 (lower is better)
Translates to: QAIGSHLQRWPQFLILELNGNIH*NSGPQV
Trigger: AACTTGGGGACCAGAATTTCAATGTATGTTTCCATT...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTATTGCTAATGCTCTTTTaGCAAGGTAGTCTATGCATA +
Preference number: 2 (lower is better)
Translates to: QAIGSHLQRWPQFLILELLLMLF*QGSLCI
Trigger: TATGCATAGACTACCTTGGCAAAAGAGCATTAGCAA...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR TCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCGACTTAACCAAATCTTaGCACACGGTTAAAATTGGT +
Preference number: 2 (lower is better)
Translates to: LVIFSLLNVHDCDILYFADLTKS*HTVKIG
Trigger: ACCAATTTTAACCGTGTGTCAAGATTTGGTTAAGTC...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR GCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAGCAGTGATAGGTTTCTaGTTTACTTCTAATAGCTTT +
Preference number: 2 (lower is better)
Translates to: QAIGSHLQRWPQFLILELAVIGF*FTSNSF
Trigger: AAAGCTATTAGAAGTAAAGCAGAAACCTATCACTGC...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAGTTGGCATTGTTTCATaGCTGGGTATAATTCATTTA +
Preference number: 2 (lower is better)
Translates to: QAIGSHLQRWPQFLILELVGIVS*LGIIHL
Trigger: TAAATGAATTATACCCAGCCATGAAACAATGCCAAC...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR CCA 72 bp GTGTGTGGTGTGGCCACGCCCCCTGAGAAAGGGGCCTaGGATTTAGGCACCTGCGGTATGCCAGTGGCACTC +
Preference number: 3 (lower is better)
Translates to: VCGVATPPEKGA*DLGTCGMPVAL
Trigger: GAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCTTTCTCAGGGGGCGTGGCCACACCACACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 72 bp TGTCACTGGCGCAGTGTGTGGTGTGGCCACGCCCCCTaGGAAAGGGGCCTGGGATTTAGGCACCTGCGGTAT +
Preference number: 3 (lower is better)
Translates to: CHWRSVWCGHAP*ERGLGFRHLRY
Trigger: ATACCGCAGGTGCCTAAATCCCAGGCCCCTTTCTCAGGGGGCGTGGCCACACCACACACTGCGCCAGTGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR GCA 72 bp ACGCCCCCTGAGAAAGGGGCCTGGGATTTAGGCACCTaGGGTATGCCAGTGGCACTCCCAGGCATAACACTG +
Preference number: 3 (lower is better)
Translates to: TPPEKGAWDLGT*GMPVALPGITL
Trigger: CAGTGTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCTTTCTCAGGGGGCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACGTGAGAGAGCAGAGATaGGGACAGGGCCTTTACACC +
Preference number: 3 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNVREQR*GQGLYT
Trigger: GGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCAC...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAGTGAGAGAGCAGAGATaGGGACAGGGCCTTTACACC +
Preference number: 3 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSVREQR*GQGLYT
Trigger: GGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCAC...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACAAAAGTGACACAGAGTaGGAACCATGCTTGAGAGAA +
Preference number: 3 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNKSDTE*EPCLRE
Trigger: TTCTCTCAAGCATGGTTCCAACTCTGTGTCACTTTT...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 72 bp GGTATGCCAGTGGCACTCCCAGGCATAACACTGGTGTaGCGACTCTCTGGGAATCTCACACATCACTCTTTC +
Preference number: 3 (lower is better)
Translates to: GMPVALPGITLV*RLSGNLTHHSF
Trigger: GAAAGAGTGATGTGTGAGATTCCCAGAGAGTCGTCACACCAGTGTTATGCCTGGGAGTGCCACTGGCATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR CCA 72 bp GGCACTCCCAGGCATAACACTGGTGTGACGACTCTCTaGGAATCTCACACATCACTCTTTCCTAGCACCGAA +
Preference number: 3 (lower is better)
Translates to: GTPRHNTGVTTL*ESHTSLFPSTE
Trigger: TTCGGTGCTAGGAAAGAGTGATGTGTGAGATTCCCAGAGAGTCGTCACACCAGTGTTATGCCTGGGAGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGGTGAGAGAGCAGAGATaGGGACAGGGCCTTTACACC +
Preference number: 3 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRVREQR*GQGLYT
Trigger: GGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCAC...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR GCA 72 bp CCATCTTTGGGAGATTTGTACCCTAGTTTCTATAGGTaGCGTCCCAGCCAGGAAGTAACTATGTGTCACTGG +
Preference number: 3 (lower is better)
Translates to: PSLGDLYPSFYR*RPSQEVTMCHW
Trigger: CCAGTGACACATAGTTACTTCCTGGCTGGGACGGCACCTATAGAAACTAGGGTACAAATCTCCCAAAGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAACTGATAGACGTGTCTTaGAGTTCTGTCAGGCAAGAC +
Preference number: 3 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQLIDVS*SSVRQD
Trigger: GTCTTGCCTGACAGAACTCAAAGACACGTCTATCAG...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAACGAGTCTGCTTGTCTaGAATCTCAATAGGTGCCCT +
Preference number: 3 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQTSLLV*NLNRCP
Trigger: AGGGCACCTATTGAGATTCAAGACAAGCAGACTCGT...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTACGAGTCTGCTTGTCTaGAATCTCAATAGGTGCCCT +
Preference number: 3 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLTSLLV*NLNRCP
Trigger: AGGGCACCTATTGAGATTCAAGACAAGCAGACTCGT...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAACGGTGCAAACCATCTTaGGGAGATTTGTACCCTAGT +
Preference number: 3 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQRCKPS*GDLYPS
Trigger: ACTAGGGTACAAATCTCCCAAAGATGGTTTGCACCG...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTTTAGGGAAGAGACAGTaGGCATTGTTTCATGGCTGG +
Preference number: 3 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRILGKRQ*ALFHGW
Trigger: CCAGCCATGAAACAATGCCAACTGTCTCTTCCCTAA...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAGAGAGAAGACAGCCCTaGATCATCAGTTATTTACAA +
Preference number: 3 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSERRQP*IISYLQ
Trigger: TTGTAAATAACTGATGATCAAGGGCTGTCTTCTCTC...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATACACTTGGATAATTaGGTGCCATCCACAAGGCGA +
Preference number: 3 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRIHLDN*VPSTRR
Trigger: TCGCCTTGTGGATGGCACCAAATTATCCAAGTGTAT...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAGTTATATTTTCTCTCTaGAATGTGCATGACTGTGAC +
Preference number: 3 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSVIFSL*NVHDCD
Trigger: GTCACAGTCATGCACATTCAAGAGAGAAAATATAAC...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAACATTACCTTGGGCATaGAGGAGGAAGAAATACCAT +
Preference number: 3 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQTLPWA*RRKKYH
Trigger: ATGGTATTTCTTCCTCCTCAATGCCCAAGGTAATGT...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAACCATCTTTGGGAGATTaGTACCCTAGTTTCTATAGG +
Preference number: 3 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQPSLGD*YPSFYR
Trigger: CCTATAGAAACTAGGGTACAAATCTCCCAAAGATGG...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCATTTAAACTGACATGTTaGCTGACGGTTGATATTACC +
Preference number: 3 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSFKLTC*LTVDIT
Trigger: GGTAATATCAACCGTCAGCAAACATGTCAGTTTAAA...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGAGTCTCCTAATACACTaGGATAATTTGGTGCCATCC +
Preference number: 3 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRSLLIH*DNLVPS
Trigger: GGATGGCACCAAATTATCCAAGTGTATTAGGAGACT...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 72 bp TGCCACAGACACACAACTGCCATTAACGCTAAAAAGTaGCACAGAGTTGGAACCATGCTTGAGAGAAGACAG +
Preference number: 3 (lower is better)
Translates to: CHRHTTAINAKK*HRVGTMLERRQ
Trigger: CTGTCTTCTCTCAAGCATGGTTCCAACTCTGTGTCACTTTTTAGCGTTAATGGCAGTTGTGTGTCTGTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 72 bp CCACAAAGGCAAATTCTCTGTGAATTGTTCGTAACGTaGGGTTGGTGTCAACATGCTGCAATCAGAGGCCTT +
Preference number: 3 (lower is better)
Translates to: PQRQILCELFVT*GWCQHAAIRGL
Trigger: AAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAATTCACAGAGAATTTGCCTTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTGACATTTGCACTTCTTaGTCTAAGTTAACGGCTAGA +
Preference number: 3 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIDICTS*SKLTAR
Trigger: TCTAGCCGTTAACTTAGACAAAGAAGTGCAAATGTC...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAGACATTTGCACTTCTTaGTCTAAGTTAACGGCTAGA +
Preference number: 3 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQDICTS*SKLTAR
Trigger: TCTAGCCGTTAACTTAGACAAAGAAGTGCAAATGTC...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCAATGGAAACATACATaGAAATTCTGGTCCCCAAGT +
Preference number: 3 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIQWKHT*KFWSPS
Trigger: ACTTGGGGACCAGAATTTCAATGTATGTTTCCATTG...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 72 bp GCAGAGATTGGGACAGGGCCTTTACACCTTCTAGAGTaGACACAGCTTAATAATCAACAAAAAGCCAGGACT +
Preference number: 3 (lower is better)
Translates to: AEIGTGPLHLLE*TQLNNQQKART
Trigger: AGTCCTGGCTTTTTGTTGATTATTAAGCTGTGTTCACTCTAGAAGGTGTAAAGGCCCTGTCCCAATCTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 72 bp CTTGCAGTAAAGATTATCAACAAATGTCACGAGAAGTaGGAGAGCAGAGATTGGGACAGGGCCTTTACACCT +
Preference number: 3 (lower is better)
Translates to: LAVKIINKCHEK*ESRDWDRAFTP
Trigger: AGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGTTGATAATCTTTACTGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 72 bp ACAGAGTTGGAACCATGCTTGAGAGAAGACAGCCCTTaGTCATCAGTTATTTACAAGTCACTCCTTGCAGTG +
Preference number: 3 (lower is better)
Translates to: TELEPCLREDSP*SSVIYKSLLAV
Trigger: CACTGCAAGGAGTGACTTGTAAATAACTGATGATCAAGGGCTGTCTTCTCTCAAGCATGGTTCCAACTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGGTTATATTTTCTCTCTaGAATGTGCATGACTGTGAC +
Preference number: 3 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRVIFSL*NVHDCD
Trigger: GTCACAGTCATGCACATTCAAGAGAGAAAATATAAC...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCAACCATGTTGTACCTaGTCTGTCATGCATTTTAAT +
Preference number: 3 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIQPCCT*SVMHFN
Trigger: ATTAAAATGCATGACAGACAAGGTACAACATGGTTG...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGTATTCTGCAACCATGTaGTACCTTGTCTGTCATGCA +
Preference number: 3 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRYSATM*YLVCHA
Trigger: TGCATGACAGACAAGGTACAACATGGTTGCAGAATA...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCCCATCTTTGGGAGATTaGTACCCTAGTTTCTATAGG +
Preference number: 3 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSPSLGD*YPSFYR
Trigger: CCTATAGAAACTAGGGTACAAATCTCCCAAAGATGG...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTTTTAAACTGACATGTTaGCTGACGGTTGATATTACC +
Preference number: 3 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIFKLTC*LTVDIT
Trigger: GGTAATATCAACCGTCAGCAAACATGTCAGTTTAAA...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGGTTTTCACATGTATATaGCCTTCCTTTAGTAGTCCT +
Preference number: 3 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRVFTCI*PSFSSP
Trigger: AGGACTACTAAAGGAAGGCAATATACATGTGAAAAC...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAGTTTTCACATGTATATaGCCTTCCTTTAGTAGTCCT +
Preference number: 3 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQVFTCI*PSFSSP
Trigger: AGGACTACTAAAGGAAGGCAATATACATGTGAAAAC...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGCCCTTTTGTACACTTTaGACAAACTATGTGCGTTTT +
Preference number: 3 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRPFCTL*TNYVRF
Trigger: AAAACGCACATAGTTTGTCAAAAGTGTACAAAAGGG...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 72 bp CTCTGCCTCTACAAGATTTTACGAGTCTGCTTGTCTTaGATCTCAATAGGTGCCCTTATGATTTGGGAAGGA +
Preference number: 3 (lower is better)
Translates to: LCLYKILRVCLS*ISIGALMIWEG
Trigger: TCCTTCCCAAATCATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGGCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCTGTATGATGATAACTTaGCCTCTGCCTCTACAAGAT +
Preference number: 3 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSCMMIT*PLPLQD
Trigger: ATCTTGTAGAGGCAGAGGCAAAGTTATCATCATACA...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTACTGATAGACGTGTCTTaGAGTTCTGTCAGGCAAGAC +
Preference number: 3 (lower is better)
Translates to: QAIGSHLQRWPQFLILELLIDVS*SSVRQD
Trigger: GTCTTGCCTGACAGAACTCAAAGACACGTCTATCAG...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAACGAGTCTGCTTGTCTaGAATCTCAATAGGTGCCCT +
Preference number: 3 (lower is better)
Translates to: QAIGSHLQRWPQFLILELTSLLV*NLNRCP
Trigger: AGGGCACCTATTGAGATTCAAGACAAGCAGACTCGT...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTTATTCTGCAACCATGTaGTACCTTGTCTGTCATGCA +
Preference number: 3 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSYSATM*YLVCHA
Trigger: TGCATGACAGACAAGGTACAACATGGTTGCAGAATA...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTATTAGGGAAGAGACAGTaGGCATTGTTTCATGGCTGG +
Preference number: 3 (lower is better)
Translates to: QAIGSHLQRWPQFLILELLGKRQ*ALFHGW
Trigger: CCAGCCATGAAACAATGCCAACTGTCTCTTCCCTAA...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTAAAAGTGACACAGAGTaGGAACCATGCTTGAGAGAA +
Preference number: 3 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFKSDTE*EPCLRE
Trigger: TTCTCTCAAGCATGGTTCCAACTCTGTGTCACTTTT...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAATACACTTGGATAATTaGGTGCCATCCACAAGGCGA +
Preference number: 3 (lower is better)
Translates to: QAIGSHLQRWPQFLILELIHLDN*VPSTRR
Trigger: TCGCCTTGTGGATGGCACCAAATTATCCAAGTGTAT...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAGACTTCCATCTTCAGTaGCCACAAAGGCAAATTCTC +
Preference number: 3 (lower is better)
Translates to: QAIGSHLQRWPQFLILELDFHLQ*PQRQIL
Trigger: GAGAATTTGCCTTTGTGGCAACTGAAGATGGAAGTC...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 72 bp CATTTGAGGGTGTGCACTGAAAACAGATCAACCGTTTaGTACCCGAATACAGATCTCCTTTTTGTTTGTGAT +
Preference number: 3 (lower is better)
Translates to: HLRVCTENRSTV*YPNTDLLFVCD
Trigger: ATCACAAACAAAAAGGAGATCTGTATTCGGGTATCAAACGGTTGATCTGTTTTCAGTGCACACCCTCAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR GCA 72 bp AAGAGAATCAGGTTTAATAGTGGTCCATTATCTCACTaGCACAGACACACAACTGCCATTAACGCTAAAAAG +
Preference number: 3 (lower is better)
Translates to: KRIRFNSGPLSH*HRHTTAINAKK
Trigger: CTTTTTAGCGTTAATGGCAGTTGTGTGTCTGTGGCAGTGAGATAATGGACCACTATTAAACCTGATTCTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATGTTATATTTTCTCTCTaGAATGTGCATGACTGTGAC +
Preference number: 3 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYVIFSL*NVHDCD
Trigger: GTCACAGTCATGCACATTCAAGAGAGAAAATATAAC...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAACATTACCTTGGGCATaGAGGAGGAAGAAATACCAT +
Preference number: 3 (lower is better)
Translates to: QAIGSHLQRWPQFLILELTLPWA*RRKKYH
Trigger: ATGGTATTTCTTCCTCCTCAATGCCCAAGGTAATGT...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTTCAATTTTAGGGTACTaGTACTCTTCCTTAGGGAAG +
Preference number: 3 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFSILGY*YSSLGK
Trigger: CTTCCCTAAGGAAGAGTACAAGTACCCTAAAATTGA...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR TCA 72 bp ATTGTTCGTCTAGTAAGCTTTGAATACAGAGTGATCTaGTGTCCTCACCCTTTTATTCTGCAACCATGTTGT +
Preference number: 3 (lower is better)
Translates to: IVRLVSFEYRVI*CPHPFILQPCC
Trigger: ACAACATGGTTGCAGAATAAAAGGGTGAGGACATCAGATCACTCTGTATTCAAAGCTTACTAGACGAACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTATGTATGATGATAACTTaGCCTCTGCCTCTACAAGAT +
Preference number: 3 (lower is better)
Translates to: QAIGSHLQRWPQFLILELCMMIT*PLPLQD
Trigger: ATCTTGTAGAGGCAGAGGCAAAGTTATCATCATACA...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAAAACAGATCAACCGTTaGATACCCGAATACAGATCT +
Preference number: 3 (lower is better)
Translates to: QAIGSHLQRWPQFLILELKQINR*IPEYRS
Trigger: AGATCTGTATTCGGGTATCAAACGGTTGATCTGTTT...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTCAACCATGTTGTACCTaGTCTGTCATGCATTTTAAT +
Preference number: 3 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFQPCCT*SVMHFN
Trigger: ATTAAAATGCATGACAGACAAGGTACAACATGGTTG...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR GCA 72 bp GATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTaGCCTTATGATTTGGGAAGGATTTCTGAATATTCT +
Preference number: 3 (lower is better)
Translates to: DFTSLLVLNLNR*PYDLGRISEYS
Trigger: AGAATATTCAGAAATCCTTCCCAAATCATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTACAACCATGTTGTACCTaGTCTGTCATGCATTTTAAT +
Preference number: 3 (lower is better)
Translates to: QAIGSHLQRWPQFLILELQPCCT*SVMHFN
Trigger: ATTAAAATGCATGACAGACAAGGTACAACATGGTTG...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAGTTTTCACATGTATATaGCCTTCCTTTAGTAGTCCT +
Preference number: 3 (lower is better)
Translates to: QAIGSHLQRWPQFLILELVFTCI*PSFSSP
Trigger: AGGACTACTAAAGGAAGGCAATATACATGTGAAAAC...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACTGGGTCTGTCACTCATaGCTTCCCCAGCCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNWVCHS*LPQPEC
Trigger: GCACTCTGGCTGGGGAAGGCATGAGTGACAGACCCA...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672188.1
CDS-3UTR CCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACCCTGAGAAAGGGGCCTaGGATTTAGGCACCTGCGGT +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNPEKGA*DLGTCG
Trigger: ACCGCAGGTGCCTAAATCCCAGGCCCCTTTCTCAGG...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACCCCCAGGCACTGGGCTaGGATGTAGAAGACAGACTT +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNPQALG*DVEDRL
Trigger: AAGTCTGTCTTCTACATCGCAGCCCAGTGCCTGGGG...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CAGGAGACCATGACCAGCGGTAAGATTTCCATGAACCATGGTGACTCCCAGGCCGCAGCTCTCATTGCCTaGCCCGCAGCTCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: QETMTSGKISMNHGDSQAAALIA*PAAPCV
Trigger: CACACAGGGAGCTGCGGGGCAGGCAATGAGAGCTGC...GGCCTGGGAGTCACCATGGTTCATGGAAATCTTACCGCTGGTCATGGTCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR GCA 90 bp CAGGCACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTCCTGGTGAGTGCAGCTCTCATTaGCTGCCCCGCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: QALGCDVEDRLGDADLPGECSSH*LPRSSL
Trigger: CAGGGAGCTGCGGGGCAGGCAATGAGAGCTGCACTC...ACCAGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR TCA 90 bp CCCCAGGCACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTCCTTTCCATGAACCATGGTaGCTCCCAGGCCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: PQALGCDVEDRLGDADLPFHEPW*LPGLPP
Trigger: TGGTGGGAGGCCTGGGAGTCACCATGGTTCATGGAA...AGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGTGCCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR GCA 90 bp GCACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTCCTGGTGCACCGCAGCTCCCTGTGTaGTGGGAGTCAGATTACGGC +
Preference number: 4 (lower is better)
Translates to: ALGCDVEDRLGDADLPGAPQLPV*WESDYG
Trigger: GCCGTAATCTGACTCCCAGCACACAGGGAGCTGCGG...TGCACCAGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR GCA 90 bp CAGGCACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTCCTGGTCTTCCCCAGCCAGAGTaGAGCTCTCATTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: QALGCDVEDRLGDADLPGLPQPE*SSHCLP
Trigger: GGGCAGGCAATGAGAGCTGCACTCTGGCTGGGGAAG...ACCAGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR CCA 90 bp GGCCCCCAGGCACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTTGGCCACCGCTGATATaGCCAAAGCACTGCACCATG +
Preference number: 4 (lower is better)
Translates to: GPQALGCDVEDRLGDADLWPPLI*PKHCTM
Trigger: CATGGTGCAGTGCTTTGGCCATATCAGCGGTGGCCA...AAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGTGCCTGGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR CCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACTCAGCAGTGGTCTCCTaGGAGCAGCACTATGCACTT +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNSAVVS*EQHYAL
Trigger: AAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGA...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp AACCAGGAGACCATGACCAGCGGTAAGATTTCCATGAACCATGGTGACTCCCAGGGATTCCTGCTCCAATaGTGGCCCCCAGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: NQETMTSGKISMNHGDSQGFLLQ*WPPGTG
Trigger: CCCAGTGCCTGGGGGCCATCATTGGAGCAGGAATCC...CTGGGAGTCACCATGGTTCATGGAAATCTTACCGCTGGTCATGGTCTCCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR TCA 90 bp GGCCCCCAGGCACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTGCGGTAAGATTTCCATaGACCATGGTGACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GPQALGCDVEDRLGDADLAVRFP*TMVTPR
Trigger: CCTGGGAGTCACCATGGTTCATGGAAATCTTACCGC...AAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGTGCCTGGGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR GCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACGCACTGCACCATGGTTaGAATGCTGAGTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNALHHG*NAESKA
Trigger: TGCTTTGGACTCAGCATTGCAACCATGGTGCAGTGC...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACGGTCCATTATCTCACTaGCACAGACACACAACTGCC +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNGPLSH*HRHTTA
Trigger: GGCAGTTGTGTGTCTGTGGCAGTGAGATAATGGACC...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAGCAGCTCTCATTGCCTaGCCCGCAGCTCCCTGTGTG +
Preference number: 4 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSAALIA*PAAPCV
Trigger: CACACAGGGAGCTGCGGGGCAGGCAATGAGAGCTGC...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672188.1
CDS-3UTR GCA 90 bp CAGGAGACCATGACCAGCGGTAAGATTTCCATGAACCATGGTGACTCCCAGGCCCACACCCCACCGCCTTaGTGTGGGTCTGTCACTCAT +
Preference number: 4 (lower is better)
Translates to: QETMTSGKISMNHGDSQAHTPPP*CGSVTH
Trigger: ATGAGTGACAGACCCACAGCAAGGCGGTGGGGTGTG...GGCCTGGGAGTCACCATGGTTCATGGAAATCTTACCGCTGGTCATGGTCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR GCA 90 bp CAGGCACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTCCTGGTCCCCAGGCACTGGGCTaGGATGTAGAAGACAGACTT +
Preference number: 4 (lower is better)
Translates to: QALGCDVEDRLGDADLPGPQALG*DVEDRL
Trigger: AAGTCTGTCTTCTACATCGCAGCCCAGTGCCTGGGG...ACCAGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGTGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR GCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACAGGTTGGTGTCAACATaGTGCAATCAGAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNRLVST*CNQRPS
Trigger: AGAAGGCCTCTGATTGCAGCATGTTGACACCAACCT...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp GGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTCCTGGTGCACACCATCAGCTCCCTGTGTGCTaGGAGTCAGATTACGGCCAC +
Preference number: 4 (lower is better)
Translates to: GCDVEDRLGDADLPGAHHQLPVC*ESDYGH
Trigger: GTGGCCGTAATCTGACTCCCAGCACACAGGGAGCTG...ATGGTGTGCACCAGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR TCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAGGATTCCTGCTCCAATaGTGGCCCCCAGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQGFLLQ*WPPGTG
Trigger: CCCAGTGCCTGGGGGCCATCATTGGAGCAGGAATCC...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACGTGCATTTGAGGGTGTaGACTGAAAACAGATCAACC +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNVHLRV*TENRST
Trigger: GGTTGATCTGTTTTCAGTGCACACCCTCAAATGCAC...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CTCAACCAGGAGACCATGACCAGCGGTAAGATTTCCATGAACCATGGTGACTCCTGGGTCTGTCACTCATaGCTTCCCCAGCCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: LNQETMTSGKISMNHGDSWVCHS*LPQPEC
Trigger: GCACTCTGGCTGGGGAAGGCATGAGTGACAGACCCA...GGAGTCACCATGGTTCATGGAAATCTTACCGCTGGTCATGGTCTCCTGGTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR TCA 90 bp CAGGCACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTCCTGGTCAAAGCAAAGGGAGATaGGAACCATGTCGACCGGTA +
Preference number: 4 (lower is better)
Translates to: QALGCDVEDRLGDADLPGQSKGR*EPCRPV
Trigger: TACCGGTCGACATGGTTCTCATCTCCCTTTGCTTTG...ACCAGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR TCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACACTAGACAGTTAAGATaGCAGAAACTGGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNTRQLR*QKLGFL
Trigger: CAGAAACCCCAGTTTCTGTCATCTTAACTGTCTAGT...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACTCAACGTCAATCACATaGACCACTCCAGGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNSTSIT*TTPGFR
Trigger: TCTAAAACCTGGAGTGGTGCATGTGATTGACGTTGA...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACCTGGGAGCAGCACTATaGACTTCATTAATAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNLGAAL*TSLIRR
Trigger: CCTTCTTATTAATGAAGTGCATAGTGCTGCTCCCAG...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGGGATTCCTGCTCCAATaGTGGCCCCCAGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLGFLLQ*WPPGTG
Trigger: CCCAGTGCCTGGGGGCCATCATTGGAGCAGGAATCC...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR TCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACTCGTCTAGTAAGCTTTaGATACAGAGTGATCTGATG +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNSSSKL*IQSDLM
Trigger: CATCAGATCACTCTGTATTCAAAGCTTACTAGACGA...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACAGAGAAGACAGCCCTTaGTCATCAGTTATTTACAAG +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNREDSP*SSVIYK
Trigger: CTTGTAAATAACTGATGATCAAGGGCTGTCTTCTCT...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACATTAACGCTAAAAAGTaGCACAGAGTTGGAACCATG +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNINAKK*HRVGTM
Trigger: CATGGTTCCAACTCTGTGTCACTTTTTAGCGTTAAT...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTCCTGGTGCACACCATGCACTGCACCATGGTTaGAATGCTGAGTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: GCDVEDRLGDADLPGAHHALHHG*NAESKA
Trigger: TGCTTTGGACTCAGCATTGCAACCATGGTGCAGTGC...ATGGTGTGCACCAGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR GCA 90 bp GCACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTCCTGGTGCAATATGGCCAAAGCACTaGACCATGGTTGCAATGCTG +
Preference number: 4 (lower is better)
Translates to: ALGCDVEDRLGDADLPGAIWPKH*TMVAML
Trigger: CAGCATTGCAACCATGGTGCAGTGCTTTGGCCATAT...TGCACCAGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR GCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCACAGATAGAGGATTCCTaGTCCAATGATGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSQIEDS*SNDGPQ
Trigger: CTGGGGGCCATCATTGGAGCAGGAATCCTCTATCTG...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CTCAACCAGGAGACCATGACCAGCGGTAAGATTTCCATGAACCATGGTGACTCCCAGATAGAGGATTCCTaGTCCAATGATGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: LNQETMTSGKISMNHGDSQIEDS*SNDGPQ
Trigger: CTGGGGGCCATCATTGGAGCAGGAATCCTCTATCTG...GGAGTCACCATGGTTCATGGAAATCTTACCGCTGGTCATGGTCTCCTGGTTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR GCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACCTCACCCTTTTATTCTaGAACCATGTTGTACCTTGT +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNLTLLF*NHVVPC
Trigger: ACAAGGTACAACATGGTTGCAGAATAAAAGGGTGAG...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGCCTGAGAAAGGGGCCTaGGATTTAGGCACCTGCGGT +
Preference number: 4 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRPEKGA*DLGTCG
Trigger: ACCGCAGGTGCCTAAATCCCAGGCCCCTTTCTCAGG...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTCCTGGTGCACACCATCCAGAAATTCCGCTGTaGCTGCTTTCCAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: GCDVEDRLGDADLPGAHHPEIPL*LLSRKL
Trigger: AAGCTTTCTGGAAAGCAGTCACAGCGGAATTTCTGG...ATGGTGTGCACCAGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR TCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCCACACTGGGAGGTGTaGCCAGATAGAGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIPHWEV*PDRGFL
Trigger: CAGGAATCCTCTATCTGGTCACACCTCCCAGTGTGG...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACACACCAATTGAAATGTaGTTATCAACTCAACCAGGA +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNTPIEM*LSTQPG
Trigger: TCCTGGTTGAGTTGATAATCACATTTCAATTGGTGT...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACTATTGTGCAAACATTTaGAATGACGGTGCAAACCAT +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNYCANI*NDGANH
Trigger: ATGGTTTGCACCGTCATTTCAAATGTTTGCACAATA...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACTTGCTAATGCTCTTTTaGCAAGGTAGTCTATGCATA +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNLLMLF*QGSLCI
Trigger: TATGCATAGACTACCTTGGCAAAAGAGCATTAGCAA...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp AACCAGGAGACCATGACCAGCGGTAAGATTTCCATGAACCATGGTGACTCCCAGGCTTTCCAGAAAGCTTaGGTCCAGACCCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: NQETMTSGKISMNHGDSQAFQKA*VQTPLK
Trigger: TTTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGC...CTGGGAGTCACCATGGTTCATGGAAATCTTACCGCTGGTCATGGTCTCCTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR TCA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATGGATTCCTGCTCCAATaGTGGCCCCCAGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYGFLLQ*WPPGTG
Trigger: CCCAGTGCCTGGGGGCCATCATTGGAGCAGGAATCC...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTGGATTCCTGCTCCAATaGTGGCCCCCAGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSGFLLQ*WPPGTG
Trigger: CCCAGTGCCTGGGGGCCATCATTGGAGCAGGAATCC...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCTTCCATGAACCATGGTaGCTCCCAGGCCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSFHEPW*LPGLPP
Trigger: TGGTGGGAGGCCTGGGAGTCACCATGGTTCATGGAA...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGTTCCATGAACCATGGTaGCTCCCAGGCCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLFHEPW*LPGLPP
Trigger: TGGTGGGAGGCCTGGGAGTCACCATGGTTCATGGAA...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR TCA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTCGAGGACAGCTCCTATaGTGGGCCCAACCCAATATA +
Preference number: 4 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLRGQLL*WAQPNI
Trigger: TATATTGGGTTGGGCCCATCATAGGAGCTGTCCTCG...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCGAGGACAGCTCCTATaGTGGGCCCAACCCAATATA +
Preference number: 4 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIRGQLL*WAQPNI
Trigger: TATATTGGGTTGGGCCCATCATAGGAGCTGTCCTCG...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAGGCATAACACTGGTGTaGCGACTCTCTGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQGITLV*RLSGNL
Trigger: GAGATTCCCAGAGAGTCGTCACACCAGTGTTATGCC...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCAGATAGAGGATTCCTaGTCCAATGATGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIQIEDS*SNDGPQ
Trigger: CTGGGGGCCATCATTGGAGCAGGAATCCTCTATCTG...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCATTGGTGTCAACATGCTaGAATCAGAGGCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSLVSTC*NQRPSR
Trigger: CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAA...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTGAGTGCAGCTCTCATTaGCTGCCCCGCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSECSSH*LPRSSL
Trigger: CAGGGAGCTGCGGGGCAGGCAATGAGAGCTGCACTC...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672188.1
CDS-3UTR CCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGCCTGAGAAAGGGGCCTaGGATTTAGGCACCTGCGGT +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRPEKGA*DLGTCG
Trigger: ACCGCAGGTGCCTAAATCCCAGGCCCCTTTCTCAGG...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAATCAGCAGTGGTCTCCTaGGAGCAGCACTATGCACTT +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQSAVVS*EQHYAL
Trigger: AAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGA...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTTCAGCAGTGGTCTCCTaGGAGCAGCACTATGCACTT +
Preference number: 4 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRISAVVS*EQHYAL
Trigger: AAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGA...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAATGTATCTGTCAGCAGTaGTCTCCTGGGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQCICQQ*SPGSST
Trigger: AGTGCTGCTCCCAGGAGACCACTGCTGACAGATACA...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACAGTCATTTGCAAAGATaGCCACAATTTTTGATCCTT +
Preference number: 4 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNSHLQR*PQFLIL
Trigger: AAGGATCAAAAATTGTGGCCATCTTTGCAAATGACT...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTCAAAGCAAAGGGAGATaGGAACCATGTCGACCGGTA +
Preference number: 4 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLQSKGR*EPCRPV
Trigger: TACCGGTCGACATGGTTCTCATCTCCCTTTGCTTTG...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCCACACTGGGAGGTGTaGCCAGATAGAGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLPHWEV*PDRGFL
Trigger: CAGGAATCCTCTATCTGGTCACACCTCCCAGTGTGG...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR TCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGCCACACTGGGAGGTGTaGCCAGATAGAGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRPHWEV*PDRGFL
Trigger: CAGGAATCCTCTATCTGGTCACACCTCCCAGTGTGG...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCATCTGGTTTCATGGTCTaGGAACAGTATTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSSGFMV*EQYSVL
Trigger: GAGCACAGAATACTGTTCTCAGACCATGAAACCAGA...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAAGGGGCTGCCAGGCGTaGTTTGCACACCAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLRGCQA*FAHQER
Trigger: TCTTTCTTGGTGTGCAAATCACGCCTGGCAGCCCCT...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581374.5
CDS-3UTR GCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGCTTACCCCACCGCCTTaGTGTGGGTCTGTCACTCAT +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRLTPPP*CGSVTH
Trigger: ATGAGTGACAGACCCACAGCAAGGCGGTGGGGTAAG...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCCCCAGGCACTGGGCTaGGATGTAGAAGACAGACTT +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLPQALG*DVEDRL
Trigger: AAGTCTGTCTTCTACATCGCAGCCCAGTGCCTGGGG...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR GCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCCCCCAGGCACTGGGCTaGGATGTAGAAGACAGACTT +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSPQALG*DVEDRL
Trigger: AAGTCTGTCTTCTACATCGCAGCCCAGTGCCTGGGG...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAGTGCATTTGAGGGTGTaGACTGAAAACAGATCAACC +
Preference number: 4 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSVHLRV*TENRST
Trigger: GGTTGATCTGTTTTCAGTGCACACCCTCAAATGCAC...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTATGGGATTTAGGCACCTaGGGTATGCCAGTGGCACTC +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLWDLGT*GMPVAL
Trigger: GAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCA...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383168.9
ENST00000672188.1
CDS-3UTR GCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCCTAGTTTCTATAGGTaGCGTCCCAGCCAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIPSFYR*RPSQEV
Trigger: TACTTCCTGGCTGGGACGGCACCTATAGAAACTAGG...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAGAAGGGAACAAGGCCTaGCATCTTCGGGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLEGNKA*HLRVLW
Trigger: CCACAGTACCCGAAGATGGCAGGCCTTGTTCCCTTC...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581374.5
CDS-3UTR CCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCTGGCCACCGCTGATATaGCCAAAGCACTGCACCATG +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSWPPLI*PKHCTM
Trigger: CATGGTGCAGTGCTTTGGCCATATCAGCGGTGGCCA...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTATGGCCACCGCTGATATaGCCAAAGCACTGCACCATG +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLWPPLI*PKHCTM
Trigger: CATGGTGCAGTGCTTTGGCCATATCAGCGGTGGCCA...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR CCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGTGGCCACCGCTGATATaGCCAAAGCACTGCACCATG +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLWPPLI*PKHCTM
Trigger: CATGGTGCAGTGCTTTGGCCATATCAGCGGTGGCCA...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR CCA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTGGTGTGACGACTCTCTaGGAATCTCACACATCACTC +
Preference number: 4 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLGVTTL*ESHTSL
Trigger: GAGTGATGTGTGAGATTCCCAGAGAGTCGTCACACC...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTGGTGTGACGACTCTCTaGGAATCTCACACATCACTC +
Preference number: 4 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIGVTTL*ESHTSL
Trigger: GAGTGATGTGTGAGATTCCCAGAGAGTCGTCACACC...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTCCAGAAATTCCGCTGTaGCTGCTTTCCAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLPEIPL*LLSRKL
Trigger: AAGCTTTCTGGAAAGCAGTCACAGCGGAATTTCTGG...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTTTCCATGAACCATGGTaGCTCCCAGGCCTCCCACCA +
Preference number: 4 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSFHEPW*LPGLPP
Trigger: TGGTGGGAGGCCTGGGAGTCACCATGGTTCATGGAA...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGGCGGTAAGATTTCCATaGACCATGGTGACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRAVRFP*TMVTPR
Trigger: CCTGGGAGTCACCATGGTTCATGGAAATCTTACCGC...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAGCGGTAAGATTTCCATaGACCATGGTGACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLAVRFP*TMVTPR
Trigger: CCTGGGAGTCACCATGGTTCATGGAAATCTTACCGC...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR TCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCGCGGTAAGATTTCCATaGACCATGGTGACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSAVRFP*TMVTPR
Trigger: CCTGGGAGTCACCATGGTTCATGGAAATCTTACCGC...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCGAGGACAGCTCCTATaGTGGGCCCAACCCAATATA +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLRGQLL*WAQPNI
Trigger: TATATTGGGTTGGGCCCATCATAGGAGCTGTCCTCG...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR TCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAACTAGACAGTTAAGATaGCAGAAACTGGGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSTRQLR*QKLGFL
Trigger: CAGAAACCCCAGTTTCTGTCATCTTAACTGTCTAGT...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGGGCATAACACTGGTGTaGCGACTCTCTGGGAATCTC +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRGITLV*RLSGNL
Trigger: GAGATTCCCAGAGAGTCGTCACACCAGTGTTATGCC...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAAAGGCAAATTCTCTGTaGATTGTTCGTAACGTGAGG +
Preference number: 4 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSKANSL*IVRNVR
Trigger: CCTCACGTTACGAACAATTCACAGAGAATTTGCCTT...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp AACCAGGAGACCATGACCAGCGGTAAGATTTCCATGAACCATGGTGACTCCCAGAAATTCCGCTGTGACTaGTTTCCAGAAAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: NQETMTSGKISMNHGDSQKFRCD*FPESLS
Trigger: ACTCAAGCTTTCTGGAAAGCAGTCACAGCGGAATTT...CTGGGAGTCACCATGGTTCATGGAAATCTTACCGCTGGTCATGGTCTCCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR GCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTACAGATAGAGGATTCCTaGTCCAATGATGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLQIEDS*SNDGPQ
Trigger: CTGGGGGCCATCATTGGAGCAGGAATCCTCTATCTG...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR GCA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTATTTCCCATGATAACTaGAGGTCCAAAGGATCGGGC +
Preference number: 4 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLISHDN*RSKGSG
Trigger: GCCCGATCCTTTGGACCTGCAGTTATCATGGGAAAT...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCACTAAGGAGTCTTGTCTaGTTTCAGTGCGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSLRSLV*FQCDLL
Trigger: TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAG...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAAGGTTGGTGTCAACATaGTGCAATCAGAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQRLVST*CNQRPS
Trigger: AGAAGGCCTCTGATTGCAGCATGTTGACACCAACCT...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTCTTCCCCAGCCAGAGTaGAGCTCTCATTGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFLPQPE*SSHCLP
Trigger: GGGCAGGCAATGAGAGCTGCACTCTGGCTGGGGAAG...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672188.1
CDS-3UTR TCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCAAAGCAAAGGGAGATaGGAACCATGTCGACCGGTA +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLQSKGR*EPCRPV
Trigger: TACCGGTCGACATGGTTCTCATCTCCCTTTGCTTTG...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR TCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCCAAAGCAAAGGGAGATaGGAACCATGTCGACCGGTA +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSQSKGR*EPCRPV
Trigger: TACCGGTCGACATGGTTCTCATCTCCCTTTGCTTTG...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTCCACACTGGGAGGTGTaGCCAGATAGAGGATTCCTG +
Preference number: 4 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSPHWEV*PDRGFL
Trigger: CAGGAATCCTCTATCTGGTCACACCTCCCAGTGTGG...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGAAGCTATTGAGCCAGTaGCATCAGTCCGTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRKLLSQ*HQSVWN
Trigger: ATTCCAAACGGACTGATGTCACTGGCTCAATAGCTT...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTCATTACCTTGGGCATTaGGGAGGAAGAAATACCATG +
Preference number: 4 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLHYLGH*GGRNTM
Trigger: CATGGTATTTCTTCCTCCTCAATGCCCAAGGTAATG...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAATCTGGTTTCATGGTCTaGGAACAGTATTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQSGFMV*EQYSVL
Trigger: GAGCACAGAATACTGTTCTCAGACCATGAAACCAGA...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTGAATTGTTCGTAACGTaGGGTTGGTGTCAACATGCT +
Preference number: 4 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLELFVT*GWCQHA
Trigger: AGCATGTTGACACCAACCTCACGTTACGAACAATTC...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATCTTACCCCACCGCCTTaGTGTGGGTCTGTCACTCAT +
Preference number: 4 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYLTPPP*CGSVTH
Trigger: ATGAGTGACAGACCCACAGCAAGGCGGTGGGGTAAG...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGGCACTGCACCATGGTTaGAATGCTGAGTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLALHHG*NAESKA
Trigger: TGCTTTGGACTCAGCATTGCAACCATGGTGCAGTGC...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR GCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCGCACTGCACCATGGTTaGAATGCTGAGTCCAAAGCA +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSALHHG*NAESKA
Trigger: TGCTTTGGACTCAGCATTGCAACCATGGTGCAGTGC...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAGGTCCATTATCTCACTaGCACAGACACACAACTGCC +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLGPLSH*HRHTTA
Trigger: GGCAGTTGTGTGTCTGTGGCAGTGAGATAATGGACC...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383168.9
ENST00000672188.1
CDS-3UTR GCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTAAGGCGATAGACCCCTaGTGCATAGATGTCATTAGA +
Preference number: 4 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIKAIDP*CIDVIR
Trigger: TCTAATGACATCTATGCAGCAGGGGTCTATCGCCTT...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAAGTTTCAAAAGCTACTaGTCTTATGGGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSSFKSY*SYGAIC
Trigger: ACAGATTGCCCCATAAGAGCAGTAGCTTTTGAAACT...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATTGGCCACCGCTGATATaGCCAAAGCACTGCACCATG +
Preference number: 4 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYWPPLI*PKHCTM
Trigger: CATGGTGCAGTGCTTTGGCCATATCAGCGGTGGCCA...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGAGTCCCACATTACCTTaGGCATTGAGGAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRSPTLP*ALRRKK
Trigger: TTTCTTCCTCCTCAATGCCCAAGGTAATGTGGGACT...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAGCTTTCCAGAAAGCTTaGGTCCAGACCCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLAFQKA*VQTPLK
Trigger: TTTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGC...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR TCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGGCTTTCCAGAAAGCTTaGGTCCAGACCCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRAFQKA*VQTPLK
Trigger: TTTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGC...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCGCTTTCCAGAAAGCTTaGGTCCAGACCCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSAFQKA*VQTPLK
Trigger: TTTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGC...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGCCAGAAATTCCGCTGTaGCTGCTTTCCAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRPEIPL*LLSRKL
Trigger: AAGCTTTCTGGAAAGCAGTCACAGCGGAATTTCTGG...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCCAGAAATTCCGCTGTaGCTGCTTTCCAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLPEIPL*LLSRKL
Trigger: AAGCTTTCTGGAAAGCAGTCACAGCGGAATTTCTGG...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR TCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCCCAGAAATTCCGCTGTaGCTGCTTTCCAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSPEIPL*LLSRKL
Trigger: AAGCTTTCTGGAAAGCAGTCACAGCGGAATTTCTGG...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGGTAACTGATGAGCAGTaGCACTTGCTAATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRVTDEQ*HLLMLF
Trigger: AAAGAGCATTAGCAAGTGTCACTGCTCATCAGTTAC...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGAGTTGGAACCATGCTTaGGAGAAGACAGCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRSWNHA*EKTALD
Trigger: ATCAAGGGCTGTCTTCTCTCAAGCATGGTTCCAACT...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAAATGGAAACATACATTaGAATTCTGGTCCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSNGNIH*NSGPQV
Trigger: AACTTGGGGACCAGAATTTCAATGTATGTTTCCATT...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAAAGGCAAATTCTCTGTaGATTGTTCGTAACGTGAGG +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQKANSL*IVRNVR
Trigger: CCTCACGTTACGAACAATTCACAGAGAATTTGCCTT...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTCTTACCCCACCGCCTTaGTGTGGGTCTGTCACTCAT +
Preference number: 4 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFLTPPP*CGSVTH
Trigger: ATGAGTGACAGACCCACAGCAAGGCGGTGGGGTAAG...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTAAATTCCGCTGTGACTaGTTTCCAGAAAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLKFRCD*FPESLS
Trigger: ACTCAAGCTTTCTGGAAAGCAGTCACAGCGGAATTT...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAATATGGCCAAAGCACTaGACCATGGTTGCAATGCTG +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLIWPKH*TMVAML
Trigger: CAGCATTGCAACCATGGTGCAGTGCTTTGGCCATAT...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR GCA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATCAGATAGAGGATTCCTaGTCCAATGATGGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYQIEDS*SNDGPQ
Trigger: CTGGGGGCCATCATTGGAGCAGGAATCCTCTATCTG...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAATTTCCCATGATAACTaGAGGTCCAAAGGATCGGGC +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLISHDN*RSKGSG
Trigger: GCCCGATCCTTTGGACCTGCAGTTATCATGGGAAAT...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR GCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCATTTCCCATGATAACTaGAGGTCCAAAGGATCGGGC +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSISHDN*RSKGSG
Trigger: GCCCGATCCTTTGGACCTGCAGTTATCATGGGAAAT...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAACTTGTCTGCTTTCAGTaGGATCTTCTAGTCATACTG +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQLVCFQ*DLLVIL
Trigger: CAGTATGACTAGAAGATCGCACTGAAAGCAGACAAG...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTACTGCCAGGCGTGATTTaGACACCAAGAAAGAATGCT +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLLPGVI*TPRKNA
Trigger: AGCATTCTTTCTTGGTGTGCAAATCACGCCTGGCAG...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581374.5
CDS-3UTR CCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAGGTGCCCTTATGATTTaGGAAGGATTTCTGAATATT +
Preference number: 4 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSGALMI*EGFLNI
Trigger: AATATTCAGAAATCCTTCCCAAATCATAAGGGCACC...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTGTAACTATGTGTCACTaGCGCAGTGTGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSVTMCH*RSVWCG
Trigger: GCCACACCACACACTGCGCCAGTGACACATAGTTAC...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATCAAAGCAAAGGGAGATaGGAACCATGTCGACCGGTA +
Preference number: 4 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYQSKGR*EPCRPV
Trigger: TACCGGTCGACATGGTTCTCATCTCCCTTTGCTTTG...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAAAGCTATTGAGCCAGTaGCATCAGTCCGTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLKLLSQ*HQSVWN
Trigger: ATTCCAAACGGACTGATGTCACTGGCTCAATAGCTT...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR TCA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTCGAGGACAGCTCCTATaGTGGGCCCAACCCAATATA +
Preference number: 4 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFRGQLL*WAQPNI
Trigger: TATATTGGGTTGGGCCCATCATAGGAGCTGTCCTCG...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGTTTGAGGGTGTGCACTaGAAACAGATCAACCGTTTG +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRFEGVH*KQINRL
Trigger: CAAACGGTTGATCTGTTTTCAGTGCACACCCTCAAA...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTCTGGTGTGGTGCATTTaGGGGTGTGCACTGAAAACA +
Preference number: 4 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSLVWCI*GCALKT
Trigger: TGTTTTCAGTGCACACCCTCAAATGCACCACACCAG...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTGAATACAGAGTGATCTaGTGTCCTCACCCTTTTATT +
Preference number: 4 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIEYRVI*CPHPFI
Trigger: AATAAAAGGGTGAGGACATCAGATCACTCTGTATTC...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAGAATACAGAGTGATCTaGTGTCCTCACCCTTTTATT +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQEYRVI*CPHPFI
Trigger: AATAAAAGGGTGAGGACATCAGATCACTCTGTATTC...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTTCGTCTAGTAAGCTTTaGATACAGAGTGATCTGATG +
Preference number: 4 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLSSSKL*IQSDLM
Trigger: CATCAGATCACTCTGTATTCAAAGCTTACTAGACGA...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAAGAGAAGACAGCCCTTaGTCATCAGTTATTTACAAG +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQREDSP*SSVIYK
Trigger: CTTGTAAATAACTGATGATCAAGGGCTGTCTTCTCT...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTAACGCTAAAAAGTaGCACAGAGTTGGAACCATG +
Preference number: 4 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRINAKK*HRVGTM
Trigger: CATGGTTCCAACTCTGTGTCACTTTTTAGCGTTAAT...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTTGCAAACATTTGAAATaGCGGTGCAAACCATCTTTG +
Preference number: 4 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRICKHLK*RCKPSL
Trigger: CAAAGATGGTTTGCACCGTCATTTCAAATGTTTGCA...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGTCTGGTTTCATGGTCTaGGAACAGTATTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRSGFMV*EQYSVL
Trigger: GAGCACAGAATACTGTTCTCAGACCATGAAACCAGA...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGGAATTGTTCGTAACGTaGGGTTGGTGTCAACATGCT +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLELFVT*GWCQHA
Trigger: AGCATGTTGACACCAACCTCACGTTACGAACAATTC...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383168.9
ENST00000672188.1
CDS-3UTR TCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGGAATTGTTCGTAACGTaGGGTTGGTGTCAACATGCT +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRELFVT*GWCQHA
Trigger: AGCATGTTGACACCAACCTCACGTTACGAACAATTC...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAGTTTATGAATTTAGGTaGAGGGAACAAGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLVYEFR*REQGLP
Trigger: TGGCAGGCCTTGTTCCCTTCACCTAAATTCATAAAC...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581374.5
CDS-3UTR GCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTATGGGATTTAGGCACCTaGGGTATGCCAGTGGCACTC +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELWDLGT*GMPVAL
Trigger: GAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCA...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATCCTAGTTTCTATAGGTaGCGTCCCAGCCAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYPSFYR*RPSQEV
Trigger: TACTTCCTGGCTGGGACGGCACCTATAGAAACTAGG...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGAAGGCGATAGACCCCTaGTGCATAGATGTCATTAGA +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLKAIDP*CIDVIR
Trigger: TCTAATGACATCTATGCAGCAGGGGTCTATCGCCTT...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383168.9
ENST00000672188.1
CDS-3UTR GCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGAAGGCGATAGACCCCTaGTGCATAGATGTCATTAGA +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRKAIDP*CIDVIR
Trigger: TCTAATGACATCTATGCAGCAGGGGTCTATCGCCTT...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGGAGAACAGTATTCTGTaGTCTTTGGAATCAGATCTC +
Preference number: 4 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRENSIL*SLESDL
Trigger: GAGATCTGATTCCAAAGAGCACAGAATACTGTTCTC...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAGAGAACAGTATTCTGTaGTCTTTGGAATCAGATCTC +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQENSIL*SLESDL
Trigger: GAGATCTGATTCCAAAGAGCACAGAATACTGTTCTC...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTAGTTTCAAAAGCTACTaGTCTTATGGGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRISFKSY*SYGAIC
Trigger: ACAGATTGCCCCATAAGAGCAGTAGCTTTTGAAACT...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGAGTCCCACATTACCTTaGGCATTGAGGAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLSPTLP*ALRRKK
Trigger: TTTCTTCCTCCTCAATGCCCAAGGTAATGTGGGACT...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383168.9
ENST00000672188.1
CDS-3UTR CCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAGTTGGCATTGTTTCATaGCTGGGTATAATTCATTTA +
Preference number: 4 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSVGIVS*LGIIHL
Trigger: TAAATGAATTATACCCAGCCATGAAACAATGCCAAC...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAGTATTCTGTGCTCTTTaGAATCAGATCTCTGATAAA +
Preference number: 4 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSVFCAL*NQISDK
Trigger: TTTATCAGAGATCTGATTCCAAAGAGCACAGAATAC...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR CAA 72 bp CCTCTGCCTCTACAAGATTTTACGAGTCTGCTTGTCTaGAATCTCAATAGGTGCCCTTATGATTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PLPLQDFTSLLV*NLNRCPYDLGR
Trigger: CCTTCCCAAATCATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGGCAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR CAA 72 bp CACAGAGTTGGAACCATGCTTGAGAGAAGACAGCCCTaGATCATCAGTTATTTACAAGTCACTCCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: HRVGTMLERRQP*IISYLQVTPCS
Trigger: ACTGCAAGGAGTGACTTGTAAATAACTGATGATCAAGGGCTGTCTTCTCTCAAGCATGGTTCCAACTCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGACACCAATTGAAATGTaGTTATCAACTCAACCAGGA +
Preference number: 4 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRTPIEM*LSTQPG
Trigger: TCCTGGTTGAGTTGATAATCACATTTCAATTGGTGT...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAGACTTAACCAAATCTTaGCACACGGTTAAAATTGGT +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQDLTKS*HTVKIG
Trigger: ACCAATTTTAACCGTGTGTCAAGATTTGGTTAAGTC...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGAACAGATCAACCGTTTaGTACCCGAATACAGATCTC +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRNRSTV*YPNTDL
Trigger: GAGATCTGTATTCGGGTATCAAACGGTTGATCTGTT...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAATTACTGGCAGAGCCTTaGGTGAAATACAAAATATGT +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQLLAEP*VKYKIC
Trigger: ACATATTTTGTATTTCACTCAAGGCTCTGCCAGTAA...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGAATGGAAACATACATTaGAATTCTGGTCCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRNGNIH*NSGPQV
Trigger: AACTTGGGGACCAGAATTTCAATGTATGTTTCCATT...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCAAGGCAAATTCTCTGTaGATTGTTCGTAACGTGAGG +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSKANSL*IVRNVR
Trigger: CCTCACGTTACGAACAATTCACAGAGAATTTGCCTT...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTATCAACGTCAATCACATaGACCACTCCAGGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLSTSIT*TTPGFR
Trigger: TCTAAAACCTGGAGTGGTGCATGTGATTGACGTTGA...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR GCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGTCAACGTCAATCACATaGACCACTCCAGGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLSTSIT*TTPGFR
Trigger: TCTAAAACCTGGAGTGGTGCATGTGATTGACGTTGA...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR GCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCTCAACGTCAATCACATaGACCACTCCAGGTTTTAGA +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSSTSIT*TTPGFR
Trigger: TCTAAAACCTGGAGTGGTGCATGTGATTGACGTTGA...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTACTTGTCTGCTTTCAGTaGGATCTTCTAGTCATACTG +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLLVCFQ*DLLVIL
Trigger: CAGTATGACTAGAAGATCGCACTGAAAGCAGACAAG...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR GCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTGTCTGCTTTCAGTaGGATCTTCTAGTCATACTG +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLLVCFQ*DLLVIL
Trigger: CAGTATGACTAGAAGATCGCACTGAAAGCAGACAAG...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR GCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTACTAAGGAGTCTTGTCTaGTTTCAGTGCGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLLRSLV*FQCDLL
Trigger: TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAG...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR GCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCCTAAGGAGTCTTGTCTaGTTTCAGTGCGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSLRSLV*FQCDLL
Trigger: TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAG...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAATTGCTAATGCTCTTTTaGCAAGGTAGTCTATGCATA +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQLLMLF*QGSLCI
Trigger: TATGCATAGACTACCTTGGCAAAAGAGCATTAGCAA...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCTGGGATTTAGGCACCTaGGGTATGCCAGTGGCACTC +
Preference number: 4 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAWDLGT*GMPVAL
Trigger: GAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCA...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGACTTGGATAATTTGGTaGCATCCACAAGGCGATAGA +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRTWIIW*HPQGDR
Trigger: TCTATCGCCTTGTGGATGGCACCAAATTATCCAAGT...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGACTTGGATAATTTGGTaGCATCCACAAGGCGATAGA +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLTWIIW*HPQGDR
Trigger: TCTATCGCCTTGTGGATGGCACCAAATTATCCAAGT...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383168.9
ENST00000672188.1
CDS-3UTR GCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCACTTGGATAATTTGGTaGCATCCACAAGGCGATAGA +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSTWIIW*HPQGDR
Trigger: TCTATCGCCTTGTGGATGGCACCAAATTATCCAAGT...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAGTAACTATGTGTCACTaGCGCAGTGTGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELVTMCH*RSVWCG
Trigger: GCCACACCACACACTGCGCCAGTGACACATAGTTAC...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCTACACTTGGATAATTTaGTGCCATCCACAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSYTWII*CHPQGD
Trigger: ATCGCCTTGTGGATGGCACCAAATTATCCAAGTGTA...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTATGTATCTGTCAGCAGTaGTCTCCTGGGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELCICQQ*SPGSST
Trigger: AGTGCTGCTCCCAGGAGACCACTGCTGACAGATACA...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCGCGGTAAGATTTCCATaGACCATGGTGACTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAAVRFP*TMVTPR
Trigger: CCTGGGAGTCACCATGGTTCATGGAAATCTTACCGC...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATTTTGAGGGTGTGCACTaGAAACAGATCAACCGTTTG +
Preference number: 4 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYFEGVH*KQINRL
Trigger: CAAACGGTTGATCTGTTTTCAGTGCACACCCTCAAA...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTACTGGTGTGGTGCATTTaGGGGTGTGCACTGAAAACA +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELLVWCI*GCALKT
Trigger: TGTTTTCAGTGCACACCCTCAAATGCACCACACCAG...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTAGTTGGAACCATGCTTaGGAGAAGACAGCCCTTGAT +
Preference number: 4 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFSWNHA*EKTALD
Trigger: ATCAAGGGCTGTCTTCTCTCAAGCATGGTTCCAACT...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAGCTAAAGCTCCTTCATaGATAGTCAAGAGACTGTTA +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLAKAPS*IVKRLL
Trigger: TAACAGTCTCTTGACTATTCATGAAGGAGCTTTAGC...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581374.5
CDS-3UTR TCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAAAGGTCCACACTTACTaGAAAGAGAAACAAATCAGC +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLKVHTY*KEKQIS
Trigger: GCTGATTTGTTTCTCTTTTCAGTAAGTGTGGACCTT...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581374.5
CDS-3UTR GCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGTTGAATCTCAATAGGTaGCCTTATGATTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLLNLNR*PYDLGR
Trigger: CCTTCCCAAATCATAAGGGCACCTATTGAGATTCAA...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383168.9
ENST00000672188.1
CDS-3UTR GCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGTTGAATCTCAATAGGTaGCCTTATGATTTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRLNLNR*PYDLGR
Trigger: CCTTCCCAAATCATAAGGGCACCTATTGAGATTCAA...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTGCAGTGATAGGTTTCTaGTTTACTTCTAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLAVIGF*FTSNSF
Trigger: AAAGCTATTAGAAGTAAAGCAGAAACCTATCACTGC...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAGCAGTGATAGGTTTCTaGTTTACTTCTAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQAVIGF*FTSNSF
Trigger: AAAGCTATTAGAAGTAAAGCAGAAACCTATCACTGC...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGTTACAAGTCACTCCTTaGAGTGATAGGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRLQVTP*SDRFLL
Trigger: AAGCAGAAACCTATCACTGCAAGGAGTGACTTGTAA...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGGAGAACAGTATTCTGTaGTCTTTGGAATCAGATCTC +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRENSIL*SLESDL
Trigger: GAGATCTGATTCCAAAGAGCACAGAATACTGTTCTC...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTTTGGTGTCAACATGCTaGAATCAGAGGCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFLVSTC*NQRPSR
Trigger: CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAA...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGAGTTTCAAAAGCTACTaGTCTTATGGGGCAATCTGT +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRSFKSY*SYGAIC
Trigger: ACAGATTGCCCCATAAGAGCAGTAGCTTTTGAAACT...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAGGTGTGACGACTCTCTaGGAATCTCACACATCACTC +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELGVTTL*ESHTSL
Trigger: GAGTGATGTGTGAGATTCCCAGAGAGTCGTCACACC...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCGTAACTATGTGTCACTaGCGCAGTGTGTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAVTMCH*RSVWCG
Trigger: GCCACACCACACACTGCGCCAGTGACACATAGTTAC...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTGTTGGCATTGTTTCATaGCTGGGTATAATTCATTTA +
Preference number: 4 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLVGIVS*LGIIHL
Trigger: TAAATGAATTATACCCAGCCATGAAACAATGCCAAC...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAGTATTCTGTGCTCTTTaGAATCAGATCTCTGATAAA +
Preference number: 4 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQVFCAL*NQISDK
Trigger: TTTATCAGAGATCTGATTCCAAAGAGCACAGAATAC...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGAGTCATTTGCAAAGATaGCCACAATTTTTGATCCTT +
Preference number: 4 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRSHLQR*PQFLIL
Trigger: AAGGATCAAAAATTGTGGCCATCTTTGCAAATGACT...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAACACCAATTGAAATGTaGTTATCAACTCAACCAGGA +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLTPIEM*LSTQPG
Trigger: TCCTGGTTGAGTTGATAATCACATTTCAATTGGTGT...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR TCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGGACTTAACCAAATCTTaGCACACGGTTAAAATTGGT +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRDLTKS*HTVKIG
Trigger: ACCAATTTTAACCGTGTGTCAAGATTTGGTTAAGTC...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAGACTTAACCAAATCTTaGCACACGGTTAAAATTGGT +
Preference number: 4 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLDLTKS*HTVKIG
Trigger: ACCAATTTTAACCGTGTGTCAAGATTTGGTTAAGTC...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR TCA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATGTAACTGATGAGCAGTaGCACTTGCTAATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYVTDEQ*HLLMLF
Trigger: AAAGAGCATTAGCAAGTGTCACTGCTCATCAGTTAC...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTACGAGTCTGCTTGTCTTaGATCTCAATAGGTGCCCTT +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELRVCLS*ISIGAL
Trigger: AAGGGCACCTATTGAGATTCAAGACAAGCAGACTCG...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTAACAGATCAACCGTTTaGTACCCGAATACAGATCTC +
Preference number: 4 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSNRSTV*YPNTDL
Trigger: GAGATCTGTATTCGGGTATCAAACGGTTGATCTGTT...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGTTACTGGCAGAGCCTTaGGTGAAATACAAAATATGT +
Preference number: 4 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLLLAEP*VKYKIC
Trigger: ACATATTTTGTATTTCACTCAAGGCTCTGCCAGTAA...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383168.9
ENST00000672188.1
CDS-3UTR TCA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCTTACTGGCAGAGCCTTaGGTGAAATACAAAATATGT +
Preference number: 4 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSLLAEP*VKYKIC
Trigger: ACATATTTTGTATTTCACTCAAGGCTCTGCCAGTAA...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAATATGGCCAAAGCACTaGACCATGGTTGCAATGCTG +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELIWPKH*TMVAML
Trigger: CAGCATTGCAACCATGGTGCAGTGCTTTGGCCATAT...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCGGTCCATTATCTCACTaGCACAGACACACAACTGCC +
Preference number: 4 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAGPLSH*HRHTTA
Trigger: GGCAGTTGTGTGTCTGTGGCAGTGAGATAATGGACC...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATCTGGGAGCAGCACTATaGACTTCATTAATAAGAAGG +
Preference number: 4 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYLGAAL*TSLIRR
Trigger: CCTTCTTATTAATGAAGTGCATAGTGCTGCTCCCAG...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTAGTCCCACATTACCTTaGGCATTGAGGAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFSPTLP*ALRRKK
Trigger: TTTCTTCCTCCTCAATGCCCAAGGTAATGTGGGACT...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTGGTGCAAACCATCTTTaGGAGATTTGTACCCTAGTT +
Preference number: 4 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSGANHL*EICTLV
Trigger: AACTAGGGTACAAATCTCCCAAAGATGGTTTGCACC...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATTACACTTGGATAATTTaGTGCCATCCACAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYYTWII*CHPQGD
Trigger: ATCGCCTTGTGGATGGCACCAAATTATCCAAGTGTA...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCGCTTTCCAGAAAGCTTaGGTCCAGACCCCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAAFQKA*VQTPLK
Trigger: TTTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGC...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAAAGCTATTGAGCCAGTaGCATCAGTCCGTTTGGAAT +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELKLLSQ*HQSVWN
Trigger: ATTCCAAACGGACTGATGTCACTGGCTCAATAGCTT...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTACATTACCTTGGGCATTaGGGAGGAAGAAATACCATG +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELHYLGH*GGRNTM
Trigger: CATGGTATTTCTTCCTCCTCAATGCCCAAGGTAATG...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTTGCAAACATTTGAAATaGCGGTGCAAACCATCTTTG +
Preference number: 4 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSCKHLK*RCKPSL
Trigger: CAAAGATGGTTTGCACCGTCATTTCAAATGTTTGCA...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCATTTCCCATGATAACTaGAGGTCCAAAGGATCGGGC +
Preference number: 4 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAISHDN*RSKGSG
Trigger: GCCCGATCCTTTGGACCTGCAGTTATCATGGGAAAT...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTTTACAAGTCACTCCTTaGAGTGATAGGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSLQVTP*SDRFLL
Trigger: AAGCAGAAACCTATCACTGCAAGGAGTGACTTGTAA...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCTTGGTGTCAACATGCTaGAATCAGAGGCCTTCTAGG +
Preference number: 4 (lower is better)
Translates to: LVIFSLLNVHDCDILYFALVSTC*NQRPSR
Trigger: CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAA...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGGTATTCTGTGCTCTTTaGAATCAGATCTCTGATAAA +
Preference number: 4 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRVFCAL*NQISDK
Trigger: TTTATCAGAGATCTGATTCCAAAGAGCACAGAATAC...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCGCTTTGAATACAGAGTaGTCTGATGTCCTCACCCTT +
Preference number: 4 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAALNTE*SDVLTL
Trigger: AAGGGTGAGGACATCAGATCACTCTGTATTCAAAGC...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTAGAGAAGACAGCCCTTaGTCATCAGTTATTTACAAG +
Preference number: 4 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFREDSP*SSVIYK
Trigger: CTTGTAAATAACTGATGATCAAGGGCTGTCTTCTCT...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTTATTGTGCAAACATTTaGAATGACGGTGCAAACCAT +
Preference number: 4 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSYCANI*NDGANH
Trigger: ATGGTTTGCACCGTCATTTCAAATGTTTGCACAATA...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTACTAAGGAGTCTTGTCTaGTTTCAGTGCGATCTTCTA +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELLRSLV*FQCDLL
Trigger: TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAG...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTATACACTTGGATAATTTaGTGCCATCCACAAGGCGAT +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELYTWII*CHPQGD
Trigger: ATCGCCTTGTGGATGGCACCAAATTATCCAAGTGTA...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCGTAACTGATGAGCAGTaGCACTTGCTAATGCTCTTT +
Preference number: 4 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAVTDEQ*HLLMLF
Trigger: AAAGAGCATTAGCAAGTGTCACTGCTCATCAGTTAC...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTACTCACCCTTTTATTCTaGAACCATGTTGTACCTTGT +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELLTLLF*NHVVPC
Trigger: ACAAGGTACAACATGGTTGCAGAATAAAAGGGTGAG...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTATTACAAGTCACTCCTTaGAGTGATAGGTTTCTGCTT +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELLQVTP*SDRFLL
Trigger: AAGCAGAAACCTATCACTGCAAGGAGTGACTTGTAA...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATGTTGGCATTGTTTCATaGCTGGGTATAATTCATTTA +
Preference number: 4 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYVGIVS*LGIIHL
Trigger: TAAATGAATTATACCCAGCCATGAAACAATGCCAAC...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTATGTTGTCTGGTTTCATaGTCTGAGAACAGTATTCTG +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELCCLVS*SENSIL
Trigger: CAGAATACTGTTCTCAGACCATGAAACCAGACAACA...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTAGTCATTTGCAAAGATaGCCACAATTTTTGATCCTT +
Preference number: 4 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSSHLQR*PQFLIL
Trigger: AAGGATCAAAAATTGTGGCCATCTTTGCAAATGACT...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAACACCAATTGAAATGTaGTTATCAACTCAACCAGGA +
Preference number: 4 (lower is better)
Translates to: QAIGSHLQRWPQFLILELTPIEM*LSTQPG
Trigger: TCCTGGTTGAGTTGATAATCACATTTCAATTGGTGT...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR GCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCCTCACCCTTTTATTCTaGAACCATGTTGTACCTTGT +
Preference number: 4 (lower is better)
Translates to: LVIFSLLNVHDCDILYFALTLLF*NHVVPC
Trigger: ACAAGGTACAACATGGTTGCAGAATAAAAGGGTGAG...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCTGTTGTCTGGTTTCATaGTCTGAGAACAGTATTCTG +
Preference number: 4 (lower is better)
Translates to: LVIFSLLNVHDCDILYFACCLVS*SENSIL
Trigger: CAGAATACTGTTCTCAGACCATGAAACCAGACAACA...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCTATTGTGCAAACATTTaGAATGACGGTGCAAACCAT +
Preference number: 4 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAYCANI*NDGANH
Trigger: ATGGTTTGCACCGTCATTTCAAATGTTTGCACAATA...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR TCA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCAATGGAAACATACATTaGAATTCTGGTCCCCAAGTT +
Preference number: 4 (lower is better)
Translates to: LVIFSLLNVHDCDILYFANGNIH*NSGPQV
Trigger: AACTTGGGGACCAGAATTTCAATGTATGTTTCCATT...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
3UTR CAA 72 bp TGTCCTCACCCTTTTATTCTGCAACCATGTTGTACCTaGTCTGTCATGCATTTTAATTCACTCAAATATCAT +
Preference number: 4 (lower is better)
Translates to: CPHPFILQPCCT*SVMHFNSLKYH
Trigger: ATGATATTTGAGTGAATTAAAATGCATGACAGACAAGGTACAACATGGTTGCAGAATAAAAGGGTGAGGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS GCA 90 bp TGGGTCTGTCACTCATGCCTTCCCCAGCCAGAGTGCAGCTCTCATTaGCTGCCCCGCAGCTCCCTGTGTGCTGGGAGTCAGATTACGGCC +
Preference number: 5 (lower is better)
Translates to: WVCHSCLPQPECSSH*LPRSSLCAGSQITA
Trigger: GGCCGTAATCTGACTCCCAGCACACAGGGAGCTGCGGGGCAGGCAATGAGAGCTGCACTCTGGCTGGGGAAGGCATGAGTGACAGACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS GCA 90 bp TCTGTCACTCATGCCTTCCCCAGCCAGAGTGCAGCTCTCATTGCCTaGCCCGCAGCTCCCTGTGTGCTGGGAGTCAGATTACGGCCACTT +
Preference number: 5 (lower is better)
Translates to: SVTHAFPSQSAALIA*PAAPCVLGVRLRPL
Trigger: AAGTGGCCGTAATCTGACTCCCAGCACACAGGGAGCTGCGGGGCAGGCAATGAGAGCTGCACTCTGGCTGGGGAAGGCATGAGTGACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR CAA 90 bp GGCCCCCAGGCACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTTCTGTTCCACCCCAGTaGATGGTGGATCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: GPQALGCDVEDRLGDADLSVPPQ*MVDPRL
Trigger: CAGCCTGGGATCCACCATCAACTGGGGTGGAACAGA...AAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGTGCCTGGGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR CAA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACACAGTCACTGCAGGGTaGATGTGGCCACCGCTGATA +
Preference number: 5 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNTVTAG*MWPPLI
Trigger: TATCAGCGGTGGCCACATCAACCCTGCAGTGACTGT...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GCACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTCCTGGTGCAAGAGTGCAGCTCTCATaGCCTGCCCCGCAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: ALGCDVEDRLGDADLPGARVQLS*PAPQLP
Trigger: AGGGAGCTGCGGGGCAGGCAATGAGAGCTGCACTCT...TGCACCAGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR CAA 90 bp GCACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTCCTGGTGCACCACACCCCACCGCCTaGCTGTGGGTCTGTCACTCA +
Preference number: 5 (lower is better)
Translates to: ALGCDVEDRLGDADLPGAPHPTA*LWVCHS
Trigger: TGAGTGACAGACCCACAGCAAGGCGGTGGGGTGTGG...TGCACCAGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR CAA 90 bp GGCCCCCAGGCACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTACAGTCACTGCAGGGTaGATGTGGCCACCGCTGATA +
Preference number: 5 (lower is better)
Translates to: GPQALGCDVEDRLGDADLTVTAG*MWPPLI
Trigger: TATCAGCGGTGGCCACATCAACCCTGCAGTGACTGT...AAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGTGCCTGGGGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR CAA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACGTGACATCAGTCCGTTaGGAATCACAGCTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNVTSVR*ESQLAK
Trigger: CTTTGCCAGCTGTGATTCCAAACGGACTGATGTCAC...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS GCA 90 bp GCCACTACACCCAGGTTTATGAATTTAGGTGAAGGGAACAAGGCCTaGCATCTTCGGGTACTGTGGGCAGGGGCTGCCAGGCGTGATTTG +
Preference number: 5 (lower is better)
Translates to: ATTPRFMNLGEGNKA*HLRVLWAGAARRDL
Trigger: CAAATCACGCCTGGCAGCCCCTGCCCACAGTACCCGAAGATGGCAGGCCTTGTTCCCTTCACCTAAATTCATAAACCTGGGTGTAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581374.5
CDS-3UTR CAA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTAGAGTGCAGCTCTCATaGCCTGCCCCGCAGCTCCCT +
Preference number: 5 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIRVQLS*PAPQLP
Trigger: AGGGAGCTGCGGGGCAGGCAATGAGAGCTGCACTCT...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672188.1
CDS CCA 90 bp ATGAATTTAGGTGAAGGGAACAAGGCCTGCCATCTTCGGGTACTGTaGGCAGGGGCTGCCAGGCGTGATTTGCACACCAAGAAAGAATGC +
Preference number: 5 (lower is better)
Translates to: MNLGEGNKACHLRVL*AGAARRDLHTKKEC
Trigger: GCATTCTTTCTTGGTGTGCAAATCACGCCTGGCAGCCCCTGCCCACAGTACCCGAAGATGGCAGGCCTTGTTCCCTTCACCTAAATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581374.5
CDS-3UTR CAA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACACATTACCTTGGGCATaGAGGAGGAAGAAATACCAT +
Preference number: 5 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNTLPWA*RRKKYH
Trigger: ATGGTATTTCTTCCTCCTCAATGCCCAAGGTAATGT...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACGACATTTGCACTTCTTaGTCTAAGTTAACGGCTAGA +
Preference number: 5 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNDICTS*SKLTAR
Trigger: TCTAGCCGTTAACTTAGACAAAGAAGTGCAAATGTC...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GGCTGCGATGTAGAAGACAGACTTGGCGATGCTGATCTTCCTGGTGCACACCATTGCTTTCCAGAAAGCTaGAGTCCAGACCCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: GCDVEDRLGDADLPGAHHCFPES*SPDPFE
Trigger: TTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGCA...ATGGTGTGCACCAGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS-3UTR CAA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTACAGTCACTGCAGGGTaGATGTGGCCACCGCTGATA +
Preference number: 5 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLTVTAG*MWPPLI
Trigger: TATCAGCGGTGGCCACATCAACCCTGCAGTGACTGT...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAGTGACATCAGTCCGTTaGGAATCACAGCTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSVTSVR*ESQLAK
Trigger: CTTTGCCAGCTGTGATTCCAAACGGACTGATGTCAC...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACCAACCATGTTGTACCTaGTCTGTCATGCATTTTAAT +
Preference number: 5 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNQPCCT*SVMHFN
Trigger: ATTAAAATGCATGACAGACAAGGTACAACATGGTTG...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp AGGGGCCTGGGATTTAGGCACCTGCGGTATGCCAGTGGCACTCCCAGGCATAACGTTTTCACATGTATATaGCCTTCCTTTAGTAGTCCT +
Preference number: 5 (lower is better)
Translates to: RGLGFRHLRYASGTPRHNVFTCI*PSFSSP
Trigger: AGGACTACTAAAGGAAGGCAATATACATGTGAAAAC...GTTATGCCTGGGAGTGCCACTGGCATACCGCAGGTGCCTAAATCCCAGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGACTTACCCCACCGCCTaGCTGTGGGTCTGTCACTCA +
Preference number: 5 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRTYPTA*LWVCHS
Trigger: TGAGTGACAGACCCACAGCAAGGCGGTGGGGTAAGT...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGTCTGTTCCACCCCAGTaGATGGTGGATCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLSVPPQ*MVDPRL
Trigger: CAGCCTGGGATCCACCATCAACTGGGGTGGAACAGA...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR CAA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGTCTGTTCCACCCCAGTaGATGGTGGATCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRSVPPQ*MVDPRL
Trigger: CAGCCTGGGATCCACCATCAACTGGGGTGGAACAGA...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCACTGATAGACGTGTCTTaGAGTTCTGTCAGGCAAGAC +
Preference number: 5 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSLIDVS*SSVRQD
Trigger: GTCTTGCCTGACAGAACTCAAAGACACGTCTATCAG...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGACAGTCACTGCAGGGTaGATGTGGCCACCGCTGATA +
Preference number: 5 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLTVTAG*MWPPLI
Trigger: TATCAGCGGTGGCCACATCAACCCTGCAGTGACTGT...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR CAA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGACAGTCACTGCAGGGTaGATGTGGCCACCGCTGATA +
Preference number: 5 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRTVTAG*MWPPLI
Trigger: TATCAGCGGTGGCCACATCAACCCTGCAGTGACTGT...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS TCA 90 bp ATAAGCATGGCCAGAAATTCCGCTGTGACTGCTTTCCAGAAAGCTTaGGTCCAGACCCCTTTGAAAGCCACCATGATGTTCTCTCTGGTA +
Preference number: 5 (lower is better)
Translates to: ISMARNSAVTAFQKA*VQTPLKATMMFSLV
Trigger: TACCAGAGAGAACATCATGGTGGCTTTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGCAGTCACAGCGGAATTTCTGGCCATGCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383168.9
ENST00000383170.3
ENST00000440832.7
ENST00000581374.5
ENST00000672188.1
ENST00000672981.2
ENST00000675739.1
CDS GCA 90 bp GCTGAGGAGAACAAAAATAAGCATGGCCAGAAATTCCGCTGTGACTaGTTTCCAGAAAGCTTGAGTCCAGACCCCTTTGAAAGCCACCAT +
Preference number: 5 (lower is better)
Translates to: AEENKNKHGQKFRCD*FPESLSPDPFESHH
Trigger: ATGGTGGCTTTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGCAGTCACAGCGGAATTTCTGGCCATGCTTATTTTTGTTCTCCTCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383168.9
ENST00000383170.3
ENST00000440832.7
ENST00000581374.5
ENST00000672188.1
ENST00000672981.2
ENST00000675739.1
CDS-3UTR CAA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTTCTGTTCCACCCCAGTaGATGGTGGATCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSSVPPQ*MVDPRL
Trigger: CAGCCTGGGATCCACCATCAACTGGGGTGGAACAGA...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTGTAGCTTCCTTTTGTTaGCTGGGCAGCTTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIVASFC*LGSFAE
Trigger: TTCAGCAAAGCTGCCCAGCAAACAAAAGGAAGCTAC...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTCAATACCTCTCCAGATaGGTCTTTCCCCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLQYLSR*VFPLLL
Trigger: GAGAAGAAGGGGAAAGACCAATCTGGAGAGGTATTG...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGACGAGTCTGCTTGTCTaGAATCTCAATAGGTGCCCT +
Preference number: 5 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRTSLLV*NLNRCP
Trigger: AGGGCACCTATTGAGATTCAAGACAAGCAGACTCGT...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAAAAAGTGACACAGAGTaGGAACCATGCTTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSKSDTE*EPCLRE
Trigger: TTCTCTCAAGCATGGTTCCAACTCTGTGTCACTTTT...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTTTAGGGAAGAGACAGTaGGCATTGTTTCATGGCTGG +
Preference number: 5 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLLGKRQ*ALFHGW
Trigger: CCAGCCATGAAACAATGCCAACTGTCTCTTCCCTAA...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGGTTCGTAACGTGAGGTaGGTGTCAACATGCTGCAAT +
Preference number: 5 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRVRNVR*VSTCCN
Trigger: ATTGCAGCATGTTGACACCAACCTCACGTTACGAAC...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAGCTGCCAGGCGTGATTaGCACACCAAGAAAGAATGC +
Preference number: 5 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLAARRD*HTKKEC
Trigger: GCATTCTTTCTTGGTGTGCAAATCACGCCTGGCAGC...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581374.5
CDS-3UTR CAA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTACTTACCCCACCGCCTaGCTGTGGGTCTGTCACTCA +
Preference number: 5 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFTYPTA*LWVCHS
Trigger: TGAGTGACAGACCCACAGCAAGGCGGTGGGGTAAGT...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTTCTGTTCCACCCCAGTaGATGGTGGATCCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFSVPPQ*MVDPRL
Trigger: CAGCCTGGGATCCACCATCAACTGGGGTGGAACAGA...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAGTGACATCAGTCCGTTaGGAATCACAGCTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLVTSVR*ESQLAK
Trigger: CTTTGCCAGCTGTGATTCCAAACGGACTGATGTCAC...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR CAA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCGTGACATCAGTCCGTTaGGAATCACAGCTGGCAAAG +
Preference number: 5 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSVTSVR*ESQLAK
Trigger: CTTTGCCAGCTGTGATTCCAAACGGACTGATGTCAC...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAAAACAGATCAACCGTTaGATACCCGAATACAGATCT +
Preference number: 5 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSKQINR*IPEYRS
Trigger: AGATCTGTATTCGGGTATCAAACGGTTGATCTGTTT...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAGACTTCCATCTTCAGTaGCCACAAAGGCAAATTCTC +
Preference number: 5 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQDFHLQ*PQRQIL
Trigger: GAGAATTTGCCTTTGTGGCAACTGAAGATGGAAGTC...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS CCA 90 bp AGCTTTGCTGAAGGCTTCTTTAAAACGACGTTTGAATTCAACATCTaGACAGAAGACATACTCATAAAGGCCACCAGCGAGGACAGCTCC +
Preference number: 5 (lower is better)
Translates to: SFAEGFFKTTFEFNI*TEDILIKATSEDSS
Trigger: GGAGCTGTCCTCGCTGGTGGCCTTTATGAGTATGTCTTCTGTCCAGATGTTGAATTCAAACGTCGTTTTAAAGAAGCCTTCAGCAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383168.9
ENST00000440832.7
ENST00000581374.5
ENST00000583022.5
ENST00000672188.1
ENST00000672981.2
ENST00000675739.1
CDS-3UTR CAA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCTGCTTTCCAGAAAGCTaGAGTCCAGACCCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSCFPES*SPDPFE
Trigger: TTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGCA...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTATGCTTTCCAGAAAGCTaGAGTCCAGACCCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLCFPES*SPDPFE
Trigger: TTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGCA...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR CAA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAGTAGCTTCCTTTTGTTaGCTGGGCAGCTTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLVASFC*LGSFAE
Trigger: TTCAGCAAAGCTGCCCAGCAAACAAAAGGAAGCTAC...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR CAA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCAATACCTCTCCAGATaGGTCTTTCCCCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLQYLSR*VFPLLL
Trigger: GAGAAGAAGGGGAAAGACCAATCTGGAGAGGTATTG...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR CAA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCCAATACCTCTCCAGATaGGTCTTTCCCCTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSQYLSR*VFPLLL
Trigger: GAGAAGAAGGGGAAAGACCAATCTGGAGAGGTATTG...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTACTGATAGACGTGTCTTaGAGTTCTGTCAGGCAAGAC +
Preference number: 5 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLLIDVS*SSVRQD
Trigger: GTCTTGCCTGACAGAACTCAAAGACACGTCTATCAG...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR CAA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCACGAGTCTGCTTGTCTaGAATCTCAATAGGTGCCCT +
Preference number: 5 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSTSLLV*NLNRCP
Trigger: AGGGCACCTATTGAGATTCAAGACAAGCAGACTCGT...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGAAAAGTGACACAGAGTaGGAACCATGCTTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRKSDTE*EPCLRE
Trigger: TTCTCTCAAGCATGGTTCCAACTCTGTGTCACTTTT...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCGGTGCAAACCATCTTaGGGAGATTTGTACCCTAGT +
Preference number: 5 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLRCKPS*GDLYPS
Trigger: ACTAGGGTACAAATCTCCCAAAGATGGTTTGCACCG...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383168.9
ENST00000672188.1
CDS-3UTR CAA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCCGGTGCAAACCATCTTaGGGAGATTTGTACCCTAGT +
Preference number: 5 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSRCKPS*GDLYPS
Trigger: ACTAGGGTACAAATCTCCCAAAGATGGTTTGCACCG...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CTTCTCTGTGTATCTGTCAGCAGTGGTCTCCTGGGAGCAGCACTATGCACTTCAGTTTTCACATGTATATaGCCTTCCTTTAGTAGTCCT +
Preference number: 5 (lower is better)
Translates to: LLCVSVSSGLLGAALCTSVFTCI*PSFSSP
Trigger: AGGACTACTAAAGGAAGGCAATATACATGTGAAAAC...TGAAGTGCATAGTGCTGCTCCCAGGAGACCACTGCTGACAGATACACAGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAAGTCTCCTAATACACTaGGATAATTTGGTGCCATCC +
Preference number: 5 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQSLLIH*DNLVPS
Trigger: GGATGGCACCAAATTATCCAAGTGTATTAGGAGACT...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGGTTCGTAACGTGAGGTaGGTGTCAACATGCTGCAAT +
Preference number: 5 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRVRNVR*VSTCCN
Trigger: ATTGCAGCATGTTGACACCAACCTCACGTTACGAAC...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS CCA 90 bp CTCAACTGTAGGAAGATGGGAACTATCAATATGAGGGTTACCCAATaGTTTTCCCAATTTCCCATGATAACTGCAGGTCCAAAGGATCGG +
Preference number: 5 (lower is better)
Translates to: LNCRKMGTINMRVTQ*FSQFPMITAGPKDR
Trigger: CCGATCCTTTGGACCTGCAGTTATCATGGGAAATTGGGAAAACCATTGGGTAACCCTCATATTGATAGTTCCCATCTTCCTACAGTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584088.1
CDS-3UTR CAA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAGTTTGCTGGGCAGCTTaGCTGAAGGCTTCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLVCWAA*LKASLK
Trigger: TTTTAAAGAAGCCTTCAGCAAAGCTGCCCAGCAAAC...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR CAA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGTGTATGATGATAACTTaGCCTCTGCCTCTACAAGAT +
Preference number: 5 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRCMMIT*PLPLQD
Trigger: ATCTTGTAGAGGCAGAGGCAAAGTTATCATCATACA...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GCCATCCACAAGGCGATAGACCCCTGCTGCATAGATGTCATTAGAAAGGTACAAGAGAGAAGACAGCCCTaGATCATCAGTTATTTACAA +
Preference number: 5 (lower is better)
Translates to: AIHKAIDPCCIDVIRKVQERRQP*IISYLQ
Trigger: TTGTAAATAACTGATGATCAAGGGCTGTCTTCTCTC...TTGTACCTTTCTAATGACATCTATGCAGCAGGGGTCTATCGCCTTGTGGATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTGAGAGAAGACAGCCCTaGATCATCAGTTATTTACAA +
Preference number: 5 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIERRQP*IISYLQ
Trigger: TTGTAAATAACTGATGATCAAGGGCTGTCTTCTCTC...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCATACACTTGGATAATTaGGTGCCATCCACAAGGCGA +
Preference number: 5 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSIHLDN*VPSTRR
Trigger: TCGCCTTGTGGATGGCACCAAATTATCCAAGTGTAT...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGCTTTCAGTGCGATCTTCTAATACACTTGGATAATTaGGTGCCATCCACAAGGCGA +
Preference number: 5 (lower is better)
Translates to: GNLRTVLRSLVCFQCDLLIHLDN*VPSTRR
Trigger: TCGCCTTGTGGATGGCACCAAATTATCCAAGTGTAT...TAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383168.9
ENST00000672188.1
CDS-3UTR CAA 90 bp ATTGTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGTCAATTTTAGGGTACTaGTACTCTTCCTTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: IVRNVRLVSTCCNQRPSRSILGY*YSSLGK
Trigger: CTTCCCTAAGGAAGAGTACAAGTACCCTAAAATTGA...CCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp ACAAATGTCACGAGAAGTGAGAGAGCAGAGATTGGGACAGGGCCTTTACACCTTGCTATAGGTAGTCATTaGCAAAGATGGCCACAATTT +
Preference number: 5 (lower is better)
Translates to: TNVTRSERAEIGTGPLHLAIGSH*QRWPQF
Trigger: AAATTGTGGCCATCTTTGCAAATGACTACCTATAGC...AAGGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCACTTCTCGTGACATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTGCTATAGGTAGTCATTaGCAAAGATGGCCACAATTT +
Preference number: 5 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRIAIGSH*QRWPQF
Trigger: AAATTGTGGCCATCTTTGCAAATGACTACCTATAGC...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTTCGTAACGTGAGGTTGGTGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTTCTTTAAAACGACGTTaGAATTCAACATCTGGACAG +
Preference number: 5 (lower is better)
Translates to: VRNVRLVSTCCNQRPSRISLKRR*NSTSGQ
Trigger: CTGTCCAGATGTTGAATTCAAACGTCGTTTTAAAGA...AATCCTAGAAGGCCTCTGATTGCAGCATGTTGACACCAACCTCACGTTACGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTCTGATAGACGTGTCTTaGAGTTCTGTCAGGCAAGAC +
Preference number: 5 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSLIDVS*SSVRQD
Trigger: GTCTTGCCTGACAGAACTCAAAGACACGTCTATCAG...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATACGAGTCTGCTTGTCTaGAATCTCAATAGGTGCCCT +
Preference number: 5 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYTSLLV*NLNRCP
Trigger: AGGGCACCTATTGAGATTCAAGACAAGCAGACTCGT...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCGTGAGAGAGCAGAGATaGGGACAGGGCCTTTACACC +
Preference number: 5 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAVREQR*GQGLYT
Trigger: GGTGTAAAGGCCCTGTCCCAATCTCTGCTCTCTCAC...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCAGTCTCCTAATACACTaGGATAATTTGGTGCCATCC +
Preference number: 5 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSSLLIH*DNLVPS
Trigger: GGATGGCACCAAATTATCCAAGTGTATTAGGAGACT...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGAGTCTCCTAATACACTaGGATAATTTGGTGCCATCC +
Preference number: 5 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRSLLIH*DNLVPS
Trigger: GGATGGCACCAAATTATCCAAGTGTATTAGGAGACT...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTTTAGGGAAGAGACAGTaGGCATTGTTTCATGGCTGG +
Preference number: 5 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSLGKRQ*ALFHGW
Trigger: CCAGCCATGAAACAATGCCAACTGTCTCTTCCCTAA...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATGTTCGTAACGTGAGGTaGGTGTCAACATGCTGCAAT +
Preference number: 5 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYVRNVR*VSTCCN
Trigger: ATTGCAGCATGTTGACACCAACCTCACGTTACGAAC...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTGTAGCTTCCTTTTGTTaGCTGGGCAGCTTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFVASFC*LGSFAE
Trigger: TTCAGCAAAGCTGCCCAGCAAACAAAAGGAAGCTAC...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTCTGATAGACGTGTCTTaGAGTTCTGTCAGGCAAGAC +
Preference number: 5 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFLIDVS*SSVRQD
Trigger: GTCTTGCCTGACAGAACTCAAAGACACGTCTATCAG...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGAAACAGATCAACCGTTaGATACCCGAATACAGATCT +
Preference number: 5 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRKQINR*IPEYRS
Trigger: AGATCTGTATTCGGGTATCAAACGGTTGATCTGTTT...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGGACATTTGCACTTCTTaGTCTAAGTTAACGGCTAGA +
Preference number: 5 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLDICTS*SKLTAR
Trigger: TCTAGCCGTTAACTTAGACAAAGAAGTGCAAATGTC...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000383168.9
ENST00000672188.1
CDS-3UTR CAA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCGACATTTGCACTTCTTaGTCTAAGTTAACGGCTAGA +
Preference number: 5 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSDICTS*SKLTAR
Trigger: TCTAGCCGTTAACTTAGACAAAGAAGTGCAAATGTC...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTATACACTTGGATAATTaGGTGCCATCCACAAGGCGA +
Preference number: 5 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSIHLDN*VPSTRR
Trigger: TCGCCTTGTGGATGGCACCAAATTATCCAAGTGTAT...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCCAATGGAAACATACATaGAAATTCTGGTCCCCAAGT +
Preference number: 5 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSQWKHT*KFWSPS
Trigger: ACTTGGGGACCAGAATTTCAATGTATGTTTCCATTG...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGTGGCTTTTATATTGTTaGATAAGGTTGTCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLWLLYC*IRLSVP
Trigger: GGGCACAGACAACCTTATCAAACAATATAAAAGCCA...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000383168.9
ENST00000672188.1
CDS-3UTR CAA 90 bp GTTTCCTTAATGGGTGGAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTGTCTTTAAAACGACGTTaGAATTCAACATCTGGACAG +
Preference number: 5 (lower is better)
Translates to: VSLMGGRKSEDSSKESCLSLKRR*NSTSGQ
Trigger: CTGTCCAGATGTTGAATTCAAACGTCGTTTTAAAGA...CAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTCCACCCATTAAGGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
CDS-3UTR CAA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTGTTTGCTGGGCAGCTTaGCTGAAGGCTTCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFVCWAA*LKASLK
Trigger: TTTTAAAGAAGCCTTCAGCAAAGCTGCCCAGCAAAC...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAGTAGCTTCCTTTTGTTaGCTGGGCAGCTTTGCTGAA +
Preference number: 5 (lower is better)
Translates to: QAIGSHLQRWPQFLILELVASFC*LGSFAE
Trigger: TTCAGCAAAGCTGCCCAGCAAACAAAAGGAAGCTAC...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGGTTATATTTTCTCTCTaGAATGTGCATGACTGTGAC +
Preference number: 5 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRVIFSL*NVHDCD
Trigger: GTCACAGTCATGCACATTCAAGAGAGAAAATATAAC...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATACATTACCTTGGGCATaGAGGAGGAAGAAATACCAT +
Preference number: 5 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYTLPWA*RRKKYH
Trigger: ATGGTATTTCTTCCTCCTCAATGCCCAAGGTAATGT...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTACGGTGCAAACCATCTTaGGGAGATTTGTACCCTAGT +
Preference number: 5 (lower is better)
Translates to: QAIGSHLQRWPQFLILELRCKPS*GDLYPS
Trigger: ACTAGGGTACAAATCTCCCAAAGATGGTTTGCACCG...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCTTTAAACTGACATGTTaGCTGACGGTTGATATTACC +
Preference number: 5 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSFKLTC*LTVDIT
Trigger: GGTAATATCAACCGTCAGCAAACATGTCAGTTTAAA...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp ATGACAGAAACTGGGGTTTCTGGAGAACATTCTAGTGACAAAAGGCAAAGCAGGCCCTTTTGTACACTTTaGACAAACTATGTGCGTTTT +
Preference number: 5 (lower is better)
Translates to: MTETGVSGEHSSDKRQSRPFCTL*TNYVRF
Trigger: AAAACGCACATAGTTTGTCAAAAGTGTACAAAAGGG...CCTGCTTTGCCTTTTGTCACTAGAATGTTCTCCAGAAACCCCAGTTTCTGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp GTGCGTTTTCAGTGTAGGGACCACCTTTCAATTTTAGGGTACTTGTACTCTTCCCCCTTTTGTACACTTTaGACAAACTATGTGCGTTTT +
Preference number: 5 (lower is better)
Translates to: VRFQCRDHLSILGYLYSSPFCTL*TNYVRF
Trigger: AAAACGCACATAGTTTGTCAAAAGTGTACAAAAGGG...GGAAGAGTACAAGTACCCTAAAATTGAAAGGTGGTCCCTACACTGAAAACGCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTGACTTCCATCTTCAGTaGCCACAAAGGCAAATTCTC +
Preference number: 5 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFDFHLQ*PQRQIL
Trigger: GAGAATTTGCCTTTGTGGCAACTGAAGATGGAAGTC...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTAGTTTGCTGGGCAGCTTaGCTGAAGGCTTCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: QAIGSHLQRWPQFLILELVCWAA*LKASLK
Trigger: TTTTAAAGAAGCCTTCAGCAAAGCTGCCCAGCAAAC...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATAAACAGATCAACCGTTaGATACCCGAATACAGATCT +
Preference number: 5 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYKQINR*IPEYRS
Trigger: AGATCTGTATTCGGGTATCAAACGGTTGATCTGTTT...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATGAGAGAAGACAGCCCTaGATCATCAGTTATTTACAA +
Preference number: 5 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYERRQP*IISYLQ
Trigger: TTGTAAATAACTGATGATCAAGGGCTGTCTTCTCTC...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCTTAGGGAAGAGACAGTaGGCATTGTTTCATGGCTGG +
Preference number: 5 (lower is better)
Translates to: LVIFSLLNVHDCDILYFALGKRQ*ALFHGW
Trigger: CCAGCCATGAAACAATGCCAACTGTCTCTTCCCTAA...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTTCAATTTTAGGGTACTaGTACTCTTCCTTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSSILGY*YSSLGK
Trigger: CTTCCCTAAGGAAGAGTACAAGTACCCTAAAATTGA...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCGTTTGCTGGGCAGCTTaGCTGAAGGCTTCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAVCWAA*LKASLK
Trigger: TTTTAAAGAAGCCTTCAGCAAAGCTGCCCAGCAAAC...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CATCACTCTTTCCTAGCACCGAAGAGAATCAGGTTTAATAGTGGTCCATTATCTGTTATATTTTCTCTCTaGAATGTGCATGACTGTGAC +
Preference number: 5 (lower is better)
Translates to: HHSFLAPKRIRFNSGPLSVIFSL*NVHDCD
Trigger: GTCACAGTCATGCACATTCAAGAGAGAAAATATAAC...AGATAATGGACCACTATTAAACCTGATTCTCTTCGGTGCTAGGAAAGAGTGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTTGTATGATGATAACTTaGCCTCTGCCTCTACAAGAT +
Preference number: 5 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFCMMIT*PLPLQD
Trigger: ATCTTGTAGAGGCAGAGGCAAAGTTATCATCATACA...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CAGGCTATAGGTAGTCATTTGCAAAGATGGCCACAATTTTTGATCCTTGAATTATATTCTGCAACCATGTaGTACCTTGTCTGTCATGCA +
Preference number: 5 (lower is better)
Translates to: QAIGSHLQRWPQFLILELYSATM*YLVCHA
Trigger: TGCATGACAGACAAGGTACAACATGGTTGCAGAATA...TAATTCAAGGATCAAAAATTGTGGCCATCTTTGCAAATGACTACCTATAGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CCTCTACAAGATTTTACGAGTCTGCTTGTCTTGAATCTCAATAGGTGCCCTTATTTTAAACTGACATGTTaGCTGACGGTTGATATTACC +
Preference number: 5 (lower is better)
Translates to: PLQDFTSLLVLNLNRCPYFKLTC*LTVDIT
Trigger: GGTAATATCAACCGTCAGCAAACATGTCAGTTTAAA...ATAAGGGCACCTATTGAGATTCAAGACAAGCAGACTCGTAAAATCTTGTAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCGACTTCCATCTTCAGTaGCCACAAAGGCAAATTCTC +
Preference number: 5 (lower is better)
Translates to: LVIFSLLNVHDCDILYFADFHLQ*PQRQIL
Trigger: GAGAATTTGCCTTTGTGGCAACTGAAGATGGAAGTC...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp TGTCAACATGCTGCAATCAGAGGCCTTCTAGGATTCATCTTACCATTTGAATTTTGGCTTTTATATTGTTaGATAAGGTTGTCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: CQHAAIRGLLGFILPFEFWLLYC*IRLSVP
Trigger: GGGCACAGACAACCTTATCAAACAATATAAAAGCCA...AAATTCAAATGGTAAGATGAATCCTAGAAGGCCTCTGATTGCAGCATGTTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCAAAAGTGACACAGAGTaGGAACCATGCTTGAGAGAA +
Preference number: 5 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAKSDTE*EPCLRE
Trigger: TTCTCTCAAGCATGGTTCCAACTCTGTGTCACTTTT...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCCCATCTTTGGGAGATTaGTACCCTAGTTTCTATAGG +
Preference number: 5 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAPSLGD*YPSFYR
Trigger: CCTATAGAAACTAGGGTACAAATCTCCCAAAGATGG...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS GCA 90 bp AATCATCAAAAATTCCCTAGGAGTAAATTAGCTATTTTAGGGATGTaGCTCATGCCACCAAGGCATTATTTAGCAAAGAGTTTGCAAGAA +
Preference number: 5 (lower is better)
Translates to: NHQKFPRSKLAILGM*LMPPRHYLAKSLQE
Trigger: TTCTTGCAAACTCTTTGCTAAATAATGCCTTGGTGGCATGAGGCACATCCCTAAAATAGCTAATTTACTCCTAGGGAATTTTTGATGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583022.5
CDS-3UTR CAA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCTGTATGATGATAACTTaGCCTCTGCCTCTACAAGAT +
Preference number: 5 (lower is better)
Translates to: LVIFSLLNVHDCDILYFACMMIT*PLPLQD
Trigger: ATCTTGTAGAGGCAGAGGCAAAGTTATCATCATACA...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCTGGCTTTTATATTGTTaGATAAGGTTGTCTGTGCCC +
Preference number: 5 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAWLLYC*IRLSVP
Trigger: GGGCACAGACAACCTTATCAAACAATATAAAAGCCA...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS-3UTR CAA 90 bp CTTGTTATATTTTCTCTCTTGAATGTGCATGACTGTGACATACTGTATTTTGCCTTTAAACTGACATGTTaGCTGACGGTTGATATTACC +
Preference number: 5 (lower is better)
Translates to: LVIFSLLNVHDCDILYFAFKLTC*LTVDIT
Trigger: GGTAATATCAACCGTCAGCAAACATGTCAGTTTAAA...GGCAAAATACAGTATGTCACAGTCATGCACATTCAAGAGAGAAAATATAACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000383168.9
ENST00000672188.1
ENST00000672981.2
CDS CAA 90 bp GTGGGTCTGTCACTCATGCCTTCCCCAGCCAGAGTGCAGCTCTCATaGCCTGCCCCGCAGCTCCCTGTGTGCTGGGAGTCAGATTACGGC +
Preference number: 6 (lower is better)
Translates to: VGLSLMPSPARVQLS*PAPQLPVCWESDYG
Trigger: GCCGTAATCTGACTCCCAGCACACAGGGAGCTGCGGGGCAGGCAATGAGAGCTGCACTCTGGCTGGGGAAGGCATGAGTGACAGACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS GCA 72 bp CTGTGGGTCTGTCACTCATGCCTTCCCCAGCCAGAGTaGAGCTCTCATTGCCTGCCCCGCAGCTCCCTGTGT +
Preference number: 6 (lower is better)
Translates to: LWVCHSCLPQPE*SSHCLPRSSLC
Trigger: ACACAGGGAGCTGCGGGGCAGGCAATGAGAGCTGCACTCTGGCTGGGGAAGGCATGAGTGACAGACCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000383170.3
ENST00000672188.1
CDS GCA 72 bp CCACACCCCACCGCCTTGCTGTGGGTCTGTCACTCATaGCTTCCCCAGCCAGAGTGCAGCTCTCATTGCCTG +
Preference number: 6 (lower is better)
Translates to: PHPTALLWVCHS*LPQPECSSHCL
Trigger: CAGGCAATGAGAGCTGCACTCTGGCTGGGGAAGGCATGAGTGACAGACCCACAGCAAGGCGGTGGGGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS GCA 72 bp CATGCCTTCCCCAGCCAGAGTGCAGCTCTCATTGCCTaGCCCGCAGCTCCCTGTGTGCTGGGAGTCAGATTA +
Preference number: 6 (lower is better)
Translates to: HAFPSQSAALIA*PAAPCVLGVRL
Trigger: TAATCTGACTCCCAGCACACAGGGAGCTGCGGGGCAGGCAATGAGAGCTGCACTCTGGCTGGGGAAGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383170.3
CDS CCA 72 bp GGTGAAGGGAACAAGGCCTGCCATCTTCGGGTACTGTaGGCAGGGGCTGCCAGGCGTGATTTGCACACCAAG +
Preference number: 6 (lower is better)
Translates to: GEGNKACHLRVL*AGAARRDLHTK
Trigger: CTTGGTGTGCAAATCACGCCTGGCAGCCCCTGCCCACAGTACCCGAAGATGGCAGGCCTTGTTCCCTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581374.5
CDS GCA 72 bp ACTTACCCCACCGCCTTGCTGTGGGTCTGTCACTCATaGCTTCCCCAGCCAGAGTGCAGCTCTCATTGCCTG +
Preference number: 6 (lower is better)
Translates to: TYPTALLWVCHS*LPQPECSSHCL
Trigger: CAGGCAATGAGAGCTGCACTCTGGCTGGGGAAGGCATGAGTGACAGACCCACAGCAAGGCGGTGGGGTAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672188.1
CDS GCA 72 bp CCCAGGTTTATGAATTTAGGTGAAGGGAACAAGGCCTaGCATCTTCGGGTACTGTGGGCAGGGGCTGCCAGG +
Preference number: 6 (lower is better)
Translates to: PRFMNLGEGNKA*HLRVLWAGAAR
Trigger: CCTGGCAGCCCCTGCCCACAGTACCCGAAGATGGCAGGCCTTGTTCCCTTCACCTAAATTCATAAACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581374.5
CDS TCA 72 bp ACTGGGCTGCGATGTAGAAGACAGACTTGGCGATGCTaGTCTTCCTGGTGCACACCATGGCCACAGTCACTG +
Preference number: 6 (lower is better)
Translates to: TGLRCRRQTWRC*SSWCTPWPQSL
Trigger: CAGTGACTGTGGCCATGGTGTGCACCAGGAAGATCAGCATCGCCAAGTCTGTCTTCTACATCGCAGCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000383168.9
ENST00000383170.3
ENST00000440832.7
ENST00000578776.1
ENST00000581374.5
ENST00000584088.1
ENST00000672188.1
ENST00000672981.2
ENST00000675739.1
CDS TCA 72 bp CCATCTTCGGGTACTGTGGGCAGGGGCTGCCAGGCGTaGTTTGCACACCAAGAAAGAATGCTTCTGCTAAAG +
Preference number: 6 (lower is better)
Translates to: PSSGTVGRGCQA*FAHQERMLLLK
Trigger: CTTTAGCAGAAGCATTCTTTCTTGGTGTGCAAATCACGCCTGGCAGCCCCTGCCCACAGTACCCGAAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581374.5
CDS GCA 72 bp GCCACCGCTGATATGGCCAAAGCACTGCACCATGGTTaGAATGCTGAGTCCAAAGCAAAGGGAGATGAGAAC +
Preference number: 6 (lower is better)
Translates to: ATADMAKALHHG*NAESKAKGDEN
Trigger: GTTCTCATCTCCCTTTGCTTTGGACTCAGCATTGCAACCATGGTGCAGTGCTTTGGCCATATCAGCGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000383168.9
ENST00000383170.3
ENST00000440832.7
ENST00000578776.1
ENST00000581374.5
ENST00000672188.1
ENST00000672981.2
ENST00000675739.1
CDS TCA 72 bp GCCAGAAATTCCGCTGTGACTGCTTTCCAGAAAGCTTaGGTCCAGACCCCTTTGAAAGCCACCATGATGTTC +
Preference number: 6 (lower is better)
Translates to: ARNSAVTAFQKA*VQTPLKATMMF
Trigger: GAACATCATGGTGGCTTTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGCAGTCACAGCGGAATTTCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383168.9
ENST00000383170.3
ENST00000440832.7
ENST00000581374.5
ENST00000672188.1
ENST00000672981.2
ENST00000675739.1
CDS TCA 72 bp CATACTCATAAAGGCCACCAGCGAGGACAGCTCCTATaGTGGGCCCAACCCAATATATCCAATGGTTTTCCC +
Preference number: 6 (lower is better)
Translates to: HTHKGHQRGQLL*WAQPNISNGFP
Trigger: GGGAAAACCATTGGATATATTGGGTTGGGCCCATCATAGGAGCTGTCCTCGCTGGTGGCCTTTATGAGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383168.9
ENST00000440832.7
ENST00000581374.5
ENST00000583022.5
ENST00000672188.1
ENST00000672981.2
CDS CAA 72 bp GGCCAGAAATTCCGCTGTGACTGCTTTCCAGAAAGCTaGAGTCCAGACCCCTTTGAAAGCCACCATGATGTT +
Preference number: 6 (lower is better)
Translates to: GQKFRCDCFPES*SPDPFESHHDV
Trigger: AACATCATGGTGGCTTTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGCAGTCACAGCGGAATTTCTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383168.9
ENST00000383170.3
ENST00000440832.7
ENST00000581374.5
ENST00000672188.1
ENST00000672981.2
ENST00000675739.1
CDS TCA 72 bp ATCAGAAGCCACTACACCCAGGTTTATGAATTTAGGTaGAGGGAACAAGGCCTGCCATCTTCGGGTACTGTG +
Preference number: 6 (lower is better)
Translates to: IRSHYTQVYEFR*REQGLPSSGTV
Trigger: CACAGTACCCGAAGATGGCAGGCCTTGTTCCCTTCACCTAAATTCATAAACCTGGGTGTAGTGGCTTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581374.5
CDS CAA 72 bp CCTGTTGTCCTCCACCTCCATGTAGCTTCCTTTTGTTaGCTGGGCAGCTTTGCTGAAGGCTTCTTTAAAACG +
Preference number: 6 (lower is better)
Translates to: PVVLHLHVASFC*LGSFAEGFFKT
Trigger: CGTTTTAAAGAAGCCTTCAGCAAAGCTGCCCAGCAAACAAAAGGAAGCTACATGGAGGTGGAGGACAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383168.9
ENST00000440832.7
ENST00000581374.5
ENST00000583022.5
ENST00000672188.1
ENST00000672981.2
ENST00000675739.1
CDS CAA 90 bp AATAAGCATGGCCAGAAATTCCGCTGTGACTGCTTTCCAGAAAGCTaGAGTCCAGACCCCTTTGAAAGCCACCATGATGTTCTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: NKHGQKFRCDCFPES*SPDPFESHHDVLSG
Trigger: ACCAGAGAGAACATCATGGTGGCTTTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGCAGTCACAGCGGAATTTCTGGCCATGCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000383168.9
ENST00000383170.3
ENST00000440832.7
ENST00000581374.5
ENST00000672188.1
ENST00000672981.2
ENST00000675739.1
CDS CAA 90 bp TACCTGACTCCTGTTGTCCTCCACCTCCATGTAGCTTCCTTTTGTTaGCTGGGCAGCTTTGCTGAAGGCTTCTTTAAAACGACGTTTGAA +
Preference number: 6 (lower is better)
Translates to: YLTPVVLHLHVASFC*LGSFAEGFFKTTFE
Trigger: TTCAAACGTCGTTTTAAAGAAGCCTTCAGCAAAGCTGCCCAGCAAACAAAAGGAAGCTACATGGAGGTGGAGGACAACAGGAGTCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000383168.9
ENST00000440832.7
ENST00000581374.5
ENST00000583022.5
ENST00000672188.1
ENST00000672981.2
ENST00000675739.1
CDS TCA 72 bp CATACTCATAAAGGCCACCAGCGAGGACAGCTCCTATaGTGGGCCCAACCCAATATATTGCAAATAAATGTC +
Preference number: 6 (lower is better)
Translates to: HTHKGHQRGQLL*WAQPNILQINV
Trigger: GACATTTATTTGCAATATATTGGGTTGGGCCCATCATAGGAGCTGTCCTCGCTGGTGGCCTTTATGAGTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675739.1
CDS GCA 72 bp AACAAAAATAAGCATGGCCAGAAATTCCGCTGTGACTaGTTTCCAGAAAGCTTGAGTCCAGACCCCTTTGAA +
Preference number: 6 (lower is better)
Translates to: NKNKHGQKFRCD*FPESLSPDPFE
Trigger: TTCAAAGGGGTCTGGACTCAAGCTTTCTGGAAAGCAGTCACAGCGGAATTTCTGGCCATGCTTATTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000383168.9
ENST00000383170.3
ENST00000440832.7
ENST00000581374.5
ENST00000672188.1
ENST00000672981.2
ENST00000675739.1
CDS TCA 72 bp CAACAGAAAATCCAATTGCTAAAGCTATTGAGCCAGTaGCATCAGTCCGTTTGGAATCACAGCTGGCAAAGA +
Preference number: 6 (lower is better)
Translates to: QQKIQLLKLLSQ*HQSVWNHSWQR
Trigger: TCTTTGCCAGCTGTGATTCCAAACGGACTGATGTCACTGGCTCAATAGCTTTAGCAATTGGATTTTCTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000383168.9
ENST00000440832.7
ENST00000578776.1
ENST00000581374.5
ENST00000583022.5
ENST00000584088.1
ENST00000672188.1
ENST00000672981.2
ENST00000675739.1
CDS GCA 72 bp GAAGGAAATCTGAGGACAGTTCTAAGGAGTCTTGTCTaGTTTCAGTGCGATCTTCTAGTCATACTGAAGACA +
Preference number: 6 (lower is better)
Translates to: EGNLRTVLRSLV*FQCDLLVILKT
Trigger: TGTCTTCAGTATGACTAGAAGATCGCACTGAAAGCAGACAAGACTCCTTAGAACTGTCCTCAGATTTCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000383168.9
ENST00000581374.5
ENST00000672188.1
ENST00000672981.2
CDS CCA 72 bp AGGAAGATGGGAACTATCAATATGAGGGTTACCCAATaGTTTTCCCAATTTCCCATGATAACTGCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: RKMGTINMRVTQ*FSQFPMITAGP
Trigger: TGGACCTGCAGTTATCATGGGAAATTGGGAAAACCATTGGGTAACCCTCATATTGATAGTTCCCATCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584088.1
CDS CAA 72 bp ATTGCTAAAGCTATTGAGCCAGTGACATCAGTCCGTTaGGAATCACAGCTGGCAAAGATAGTAAACACCAAT +
Preference number: 6 (lower is better)
Translates to: IAKAIEPVTSVR*ESQLAKIVNTN
Trigger: ATTGGTGTTTACTATCTTTGCCAGCTGTGATTCCAAACGGACTGATGTCACTGGCTCAATAGCTTTAGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000383168.9
ENST00000440832.7
ENST00000578776.1
ENST00000581374.5
ENST00000583022.5
ENST00000584088.1
ENST00000672188.1
ENST00000672981.2
ENST00000675739.1