RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APOLD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000178878

Ensembl transcript IDs: ENST00000326765.10, ENST00000356591.5, ENST00000534843.1, ENST00000540583.5, ENST00000588943.1

Found 494 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGTaGGGTCTCCGGAAGTGGGTCTGCGGCGCGCGGGATGCTGGGAAA +
Preference number: 1 (lower is better)
Translates to: RFGRRIVFLGCRHLV*GLRKWVCGARDAGK
Trigger: TTTCCCAGCATCCCGCGCGCCGCAGACCCACTTCCGGAGACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
3UTR GCA 90 bp GCAGCAAATTCAGAGCTGTATGTTGCATGCCCCATGGCCAGCGAGTaGCCTCCTGTGGCCTGTCACTTGGGTCTCACACTGCGCAGGGTG +
Preference number: 1 (lower is better)
Translates to: AANSELYVACPMASE*PPVACHLGLTLRRV
Trigger: CACCCTGCGCAGTGTGAGACCCAAGTGACAGGCCACAGGAGGGCACTCGCTGGCCATGGGGCATGCAACATACAGCTCTGAATTTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR GCA 90 bp TCCTGTGGCCTGTCACTTGGGTCTCACACTGCGCAGGGTGCTCGTTaGAGTTTTATTCCTGAGGATGGGAAGTTGGGGGCAATCTGGTGT +
Preference number: 1 (lower is better)
Translates to: SCGLSLGSHTAQGAR*SFIPEDGKLGAIWC
Trigger: ACACCAGATTGCCCCCAACTTCCCATCCTCAGGAATAAAACTGCAACGAGCACCCTGCGCAGTGTGAGACCCAAGTGACAGGCCACAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CCA 90 bp CCCCAGGGTGCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTaGCTTCTGGGACACAGTCTGTCCTTGGTCATCTGTGAACGACTC +
Preference number: 1 (lower is better)
Translates to: PQGARTRALSLSLSF*LLGHSLSLVICERL
Trigger: GAGTCGTTCACAGATGACCAAGGACAGACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGCACCCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 90 bp CCCAGGTCTTTAAATGTTTTAGTTTCCTCCTCTTCCACAATCGGCTaGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATC +
Preference number: 1 (lower is better)
Translates to: PRSLNVLVSSSSTIG*DASVGESCSSGAAI
Trigger: GATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCGATTGTGGAAGAGGAGGAAACTAAAACATTTAAAGACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
3UTR CCA 90 bp CTAGGGCAAACAAACGCTGCGGGGTCTCCAGCAGTGCGTTTAGAATaGGCAAAGCAAAGGCGCCTGTCTTTCCAGAGCCAGTTTCTGCAA +
Preference number: 1 (lower is better)
Translates to: LGQTNAAGSPAVRLE*AKQRRLSFQSQFLQ
Trigger: TTGCAGAAACTGGCTCTGGAAAGACAGGCGCCTTTGCTTTGCCCATTCTAAACGCACTGCTGGAGACCCCGCAGCGTTTGTTTGCCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR GCA 90 bp GCTACTAAGGCTATTCTGGAAAGCAGCAAATTCAGAGCTGTATGTTaGATGCCCCATGGCCAGCGAGTGCCCTCCTGTGGCCTGTCACTT +
Preference number: 1 (lower is better)
Translates to: ATKAILESSKFRAVC*MPHGQRVPSCGLSL
Trigger: AAGTGACAGGCCACAGGAGGGCACTCGCTGGCCATGGGGCATGCAACATACAGCTCTGAATTTGCTGCTTTCCAGAATAGCCTTAGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CCA 90 bp GCCTTCCTCACGCACATTTTGAGGACTTCAAAGACTAGTAGGACTTaGAGAGGACCCAGAGGATGGCACTCTCTCCAGTCTCAGGCCAAG +
Preference number: 1 (lower is better)
Translates to: AFLTHILRTSKTSRT*RGPRGWHSLQSQAK
Trigger: CTTGGCCTGAGACTGGAGAGAGTGCCATCCTCTGGGTCCTCTCCAAGTCCTACTAGTCTTTGAAGTCCTCAAAATGTGCGTGAGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 90 bp GAGGGGAAAGGGAAGAGGAGGAGATATCAGCACCAGGGTCCTCTCTaGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGC +
Preference number: 1 (lower is better)
Translates to: EGKGKRRRYQHQGPL*VLNHPTTFREGLIC
Trigger: GCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCAGAGAGGACCCTGGTGCTGATATCTCCTCCTCTTCCCTTTCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 90 bp GTGCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTaGGACACAGTCTGTCCTTGGTCATCTGTGAACGACTCTGAAGAC +
Preference number: 1 (lower is better)
Translates to: VHVRVLSLSLSHFGF*DTVCPWSSVNDSED
Trigger: GTCTTCAGAGTCGTTCACAGATGACCAAGGACAGACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 90 bp CTGCGCAGGGTGCTCGTTGCAGTTTTATTCCTGAGGATGGGAAGTTaGGGGCAATCTGGTGTCCGTCACCAGAAATCAAAGGCACTTCAA +
Preference number: 1 (lower is better)
Translates to: LRRVLVAVLFLRMGS*GQSGVRHQKSKALQ
Trigger: TTGAAGTGCCTTTGATTTCTGGTGACGGACACCAGATTGCCCCCAACTTCCCATCCTCAGGAATAAAACTGCAACGAGCACCCTGCGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR GCA 90 bp CCTCTCCCCGACCCCAGTACTGAAATTATACTTCCTCAGACATACTaGCCCATCACTGGGAAGGGTGCGGACAGATTGGGTACATTTATA +
Preference number: 1 (lower is better)
Translates to: PLPDPSTEIILPQTY*PITGKGADRLGTFI
Trigger: TATAAATGTACCCAATCTGTCCGCACCCTTCCCAGTGATGGGGCAGTATGTCTGAGGAAGTATAATTTCAGTACTGGGGTCGGGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR TCA 90 bp CTAGGCGCTTACTCTGACTCATTTGTCCATGGAGGGGGATGGCAGTaGAGCCAAGATTTCGCAGTAGCAAAGCTGTTCTCTGGGTATTAT +
Preference number: 1 (lower is better)
Translates to: LGAYSDSFVHGGGWQ*SQDFAVAKLFSGYY
Trigger: ATAATACCCAGAGAACAGCTTTGCTACTGCGAAATCTTGGCTTCACTGCCATCCCCCTCCATGGACAAATGAGTCAGAGTAAGCGCCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR TCA 90 bp TCCTTGGAATGGGTAGGAATGTCAAAGTTGACAACCACATCTACATaGGGTATGTCCAAACCTCGGCTGGCAACGTCAGTTGCTAGAAGA +
Preference number: 1 (lower is better)
Translates to: SLEWVGMSKLTTTST*GMSKPRLATSVARR
Trigger: TCTTCTAGCAACTGACGTTGCCAGCCGAGGTTTGGACATACCTCATGTAGATGTGGTTGTCAACTTTGACATTCCTACCCATTCCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CCA 90 bp GGGATGGCAGTGAAGCCAAGATTTCGCAGTAGCAAAGCTGTTCTCTaGGTATTATTACAGGTGCTGCAGAATATCATAAAGGAGTTTCCA +
Preference number: 1 (lower is better)
Translates to: GMAVKPRFRSSKAVL*VLLQVLQNIIKEFP
Trigger: TGGAAACTCCTTTATGATATTCTGCAGCACCTGTAATAATACCCAGAGAACAGCTTTGCTACTGCGAAATCTTGGCTTCACTGCCATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR GCA 90 bp CTCTGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTaGTCTGGATTCTGGAGTTCTTTGTATCAGAAATTCTGGAATAGA +
Preference number: 1 (lower is better)
Translates to: LWVLNHPTTFREGLI*SGFWSSLYQKFWNR
Trigger: TCTATTCCAGAATTTCTGATACAAAGAACTCCAGAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR GCA 90 bp GAGAGAGACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTaGCTTAGAAACTCAAACTTAATCTCATCTCTTGCAAAGAGCCTC +
Preference number: 1 (lower is better)
Translates to: ERDNQGKQCYFQLMP*LRNSNLISSLAKSL
Trigger: GAGGCTCTTTGCAAGAGATGAGATTAAGTTTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGTCTCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR GCA 90 bp GTAAATACTTTTGACTTTGACACCTACCATATTGGAAATGACAGGTaGCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTG +
Preference number: 1 (lower is better)
Translates to: VNTFDFDTYHIGNDR*PRASASKQLGFECL
Trigger: CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATTTCCAATATGGTAGGTGTCAAAGTCAAAAGTATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR GCA 90 bp CACAATGCAAGCTTCCATTACAAGCTTAAACTCAGCTCCTGGTCTTaGCATTCAAGACTCTCCACACTTACTTCAAAGGATCACTTAAAA +
Preference number: 1 (lower is better)
Translates to: HNASFHYKLKLSSWS*HSRLSTLTSKDHLK
Trigger: TTTTAAGTGATCCTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAGCTTGTAATGGAAGCTTGCATTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 90 bp CATTCTGGACACAATTCTGACCAATTTCAGTCTCATGATCTCTGTTaGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGAACAGCAGAA +
Preference number: 1 (lower is better)
Translates to: HSGHNSDQFQSHDLC*SRFHSPILFYRTAE
Trigger: TTCTGCTGTTCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAACAGAGATCATGAGACTGAAATTGGTCAGAATTGTGTCCAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CCA 90 bp AAGTATTTGAGAGCTCTCAAGTTGAAACCTTTCGTATTTTCCAAGTaGTCAATCAGTCGACCAGGAGTTGCTATTATTATATGTGGTTTT +
Preference number: 1 (lower is better)
Translates to: KYLRALKLKPFVFSK*SISRPGVAIIICGF
Trigger: AAAACCACATATAATAATAGCAACTCCTGGTCGACTGATTGACCACTTGGAAAATACGAAAGGTTTCAACTTGAGAGCTCTCAAATACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CAA 90 bp TGGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTaGTGTGAGGTCTCCGGAAGTGGGTCTGCGGCGCGCGGGATGCTG +
Preference number: 2 (lower is better)
Translates to: WDASVGESCSSGAAI*CEVSGSGSAARGML
Trigger: CAGCATCCCGCGCGCCGCAGACCCACTTCCGGAGACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
3UTR-3UTR CCA 90 bp CGGCTGGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGCGTCCGCTAGGCAGGTaGGGCCCAGTGAATATGGGC +
Preference number: 2 (lower is better)
Translates to: RLGRFGRRIVFLGCRHLVRPLGR*GPVNMG
Trigger: GCCCATATTCACTGGGCCCCACCTGCCTAGCGGACG...CACAAGATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
3UTR-3UTR GCA 90 bp TCGGGCAAACCTTTGGGCTTCAGCGACGCGTTCTGTCAGCATCATAACCTCATCCTCCGGAAGTGGGTCTaGGGCGCGCGGGATGCTGGG +
Preference number: 2 (lower is better)
Translates to: SGKPLGFSDAFCQHHNLILRKWV*GARDAG
Trigger: CCCAGCATCCCGCGCGCCGCAGACCCACTTCCGGAG...GATGAGGTTATGATGCTGACAGAACGCGTCGCTGAAGCCCAAAGGTTTGCCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR GCA 90 bp CACAATCGGCTGGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATGAGCTGTATGTTGCATaGCCCATGGCCAGCGAGTGC +
Preference number: 2 (lower is better)
Translates to: HNRLGRFGRRIVFLGCRHELYVA*PMASEC
Trigger: GCACTCGCTGGCCATGGGGCATGCAACATACAGCTC...ATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCGATTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR CCA 90 bp GTCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGTGAGGTCTCCGGAAGTCGTCCGCTAGGCAGGTaGGGCCCAGTGAATATGGGC +
Preference number: 2 (lower is better)
Translates to: VGESCSSGAAILCEVSGSRPLGR*GPVNMG
Trigger: GCCCATATTCACTGGGCCCCACCTGCCTAGCGGACG...ACTTCCGGAGACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
3UTR-3UTR CCA 90 bp CCATCTTGTGTGAGGTCTCCGGAAGTGGGTCTGCGGCGCGCGGGATGCTGGGAACTGAGGATGGGAAGTTaGGGGCAATCTGGTGTCCGT +
Preference number: 2 (lower is better)
Translates to: PSCVRSPEVGLRRAGCWELRMGS*GQSGVR
Trigger: ACGGACACCAGATTGCCCCCAACTTCCCATCCTCAG...TTCCCAGCATCCCGCGCGCCGCAGACCCACTTCCGGAGACCTCACACAAGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CAA 90 bp GTTGCATGCCCCATGGCCAGCGAGTGCCCTCCTGTGGCCTGTCACTaGGGTCTCACACTGCGCAGGGTGCTCGTTGCAGTTTTATTCCTG +
Preference number: 2 (lower is better)
Translates to: VACPMASECPPVACH*GLTLRRVLVAVLFL
Trigger: CAGGAATAAAACTGCAACGAGCACCCTGCGCAGTGTGAGACCCAAGTGACAGGCCACAGGAGGGCACTCGCTGGCCATGGGGCATGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR GCA 90 bp TTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACACATCTGTCACACCCAGCGCCCCCTGCGGGCTTaGCGGGGATTGCACCCGTCC +
Preference number: 2 (lower is better)
Translates to: FCPSQLVTSFTQHICHTQRPLRA*RGLHPS
Trigger: GGACGGGTGCAATCCCCGGCAAGCCCGCAGGGGGCG...CTGGGTGTGACAGATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
3UTR-3UTR GCA 90 bp TGGATCTTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACACATCTCCCCGGACGACGTaGTCTGCGCGCCCCCTGCGG +
Preference number: 2 (lower is better)
Translates to: WILVGFVHPNWSQASHNTSPRTT*SARPLR
Trigger: CCGCAGGGGGCGCGCAGAGCACGTCGTCCGGGGAGA...TGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
3UTR-3UTR GCA 90 bp GGCAGAGAAGAGGAATGTTTTCCGATCTCGAGGAATCACTTTGAGGATCTTGTCCGCCCCCTGCGGGCTTaGCGGGGATTGCACCCGTCC +
Preference number: 2 (lower is better)
Translates to: GREEECFPISRNHFEDLVRPLRA*RGLHPS
Trigger: GGACGGGTGCAATCCCCGGCAAGCCCGCAGGGGGCG...GACAAGATCCTCAAAGTGATTCCTCGAGATCGGAAAACATTCCTCTTCTCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR GCA 90 bp ATCTGGATCTTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACGGGCTTGCCGGGGATTaGACCCGTCCGCTAGGCAGG +
Preference number: 2 (lower is better)
Translates to: IWILVGFVHPNWSQASHNGLAGD*TRPLGR
Trigger: CCTGCCTAGCGGACGGGTGCAATCCCCGGCAAGCCC...GTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
3UTR-3UTR GCA 90 bp CACATTTCACAGGATTCTTCAGAGCTGCTCGCTGAAGTTTTTGAACCTTCTTGGTCTCCCCGGACGACGTaGTCTGCGCGCCCCCTGCGG +
Preference number: 2 (lower is better)
Translates to: HISQDSSELLAEVFEPSWSPRTT*SARPLR
Trigger: CCGCAGGGGGCGCGCAGAGCACGTCGTCCGGGGAGA...CCAAGAAGGTTCAAAAACTTCAGCGAGCAGCTCTGAAGAATCCTGTGAAATGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR TCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGACACGGGCTTCCCCTCTaGGTACTTGGAGGACTGGAT +
Preference number: 2 (lower is better)
Translates to: DHGVPREAVRLRESSSRGHGLPL*VLGGLD
Trigger: ATCCAGTCCTCCAAGTACTCAGAGGGGAAGCCCGTG...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR TCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACGGAGCAGGACTTAGATaGCGGCTTCACGGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNGAGLR*RLHGLP
Trigger: GGGAAGCCCGTGAAGCCGTCATCTAAGTCCTGCTCC...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR GCA 90 bp CAGAAGAGCACACCCTACTCATGTCATGAGCAAGGAATCAAAGTCGAAGAACAGGGGCTTGCCGGGGATTaGACCCGTCCGCTAGGCAGG +
Preference number: 2 (lower is better)
Translates to: QKSTPYSCHEQGIKVEEQGLAGD*TRPLGR
Trigger: CCTGCCTAGCGGACGGGTGCAATCCCCGGCAAGCCC...CTGTTCTTCGACTTTGATTCCTTGCTCATGACATGAGTAGGGTGTGCTCTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR TCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGGGAGCAGGACTTAGATaGCGGCTTCACGGGCTTCCC +
Preference number: 2 (lower is better)
Translates to: NDRCPRASASKQLGFECLGAGLR*RLHGLP
Trigger: GGGAAGCCCGTGAAGCCGTCATCTAAGTCCTGCTCC...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTCTTGGAGGACTGGATTaGGAGCCACTCAGGAAAGGC +
Preference number: 2 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSLGGLD*EPLRKG
Trigger: GCCTTTCCTGAGTGGCTCCCAATCCAGTCCTCCAAG...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGATCCCCTCTGAGTACTTaGAGGACTGGATTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: DHGVPREAVRLRESSSRGSPLST*RTGLGA
Trigger: GGCTCCCAATCCAGTCCTCCAAGTACTCAGAGGGGA...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR TCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGCACGGGCTTCCCCTCTaGGTACTTGGAGGACTGGAT +
Preference number: 2 (lower is better)
Translates to: NDRCPRASASKQLGFECLHGLPL*VLGGLD
Trigger: ATCCAGTCCTCCAAGTACTCAGAGGGGAAGCCCGTG...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp GGATCTTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACACATGCGAGTGCCCTCCTGTaGCCTGTCACTTGGGTCTCA +
Preference number: 2 (lower is better)
Translates to: GSWWVLSIPTGHKLHTTHASALL*PVTWVS
Trigger: TGAGACCCAAGTGACAGGCCACAGGAGGGCACTCGC...ATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CAA 90 bp ACTGCGCAGGGTGCTCGTTGCAGTTTTATTCCTGAGGATGGGAAGTaGGGGGCAATCTGGTGTCCGTCACCAGAAATCAAAGGCACTTCA +
Preference number: 2 (lower is better)
Translates to: TAQGARCSFIPEDGK*GAIWCPSPEIKGTS
Trigger: TGAAGTGCCTTTGATTTCTGGTGACGGACACCAGATTGCCCCCAACTTCCCATCCTCAGGAATAAAACTGCAACGAGCACCCTGCGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR CCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGAGCTCCTAACCCAGCTTaGTGTTTTCCTAAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: DHGVPREAVRLRESSSRGAPNPA*CFPKGA
Trigger: AGCTCCCTTAGGAAAACACCAAGCTGGGTTAGGAGC...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTCCCCTCTGAGTACTTaGAGGACTGGATTGGGAGCC +
Preference number: 2 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLSPLST*RTGLGA
Trigger: GGCTCCCAATCCAGTCCTCCAAGTACTCAGAGGGGA...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR TCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACCGTTCAGAGAAGGGCTaGTTTGCTCTGGATTCTGGA +
Preference number: 2 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNRSEKG*FALDSG
Trigger: TCCAGAATCCAGAGCAAATCAGCCCTTCTCTGAACG...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR GCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAGACACTGCCCCAGGGTaGACGTACGCGTGCTCTCTC +
Preference number: 2 (lower is better)
Translates to: TIKESNAISSSCPALETQDTAPG*TYACSL
Trigger: GAGAGAGCACGCGTACGTGCACCCTGGGGCAGTGTC...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGCACCAGGGTCCTCTCTaGGTTCTGAACCATCCTACA +
Preference number: 2 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLHQGPL*VLNHPT
Trigger: TGTAGGATGGTTCAGAACCCAGAGAGGACCCTGGTG...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp GGTAGGAATGTCAAAGTTGACAACCACATCTACATGAGGTATGTCCAAACCTCGATGTTGCATGCCCCATaGCCAGCGAGTGCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: GRNVKVDNHIYMRYVQTSMLHAP*PASALL
Trigger: CAGGAGGGCACTCGCTGGCCATGGGGCATGCAACAT...CGAGGTTTGGACATACCTCATGTAGATGTGGTTGTCAACTTTGACATTCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR GCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCCCCATGAGGATGATTTaGTGGCCTCGGTCATTAGGG +
Preference number: 2 (lower is better)
Translates to: WVLNHPTTFREGLICSGFPMRMI*WPRSLG
Trigger: CCCTAATGACCGAGGCCAGCAAATCATCCTCATGGG...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR GCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGAAGAGAAGGGCTGATTTaGTCTGGATTCTGGAGTTCT +
Preference number: 2 (lower is better)
Translates to: DHGVPREAVRLRESSSRGREGLI*SGFWSS
Trigger: AGAACTCCAGAATCCAGAGCAAATCAGCCCTTCTCT...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGATGAGGATGATTTGCTaGCCTCGGTCATTAGGGGGA +
Preference number: 2 (lower is better)
Translates to: NDRCPRASASKQLGFECLMRMIC*PRSLGG
Trigger: TCCCCCTAATGACCGAGGCCAGCAAATCATCCTCAT...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp CAGAAGAGCACACCCTACTCATGTCATGAGCAAGGAATCAAAGTCGAAGAACAGTCTTCCACAATCGGCTaGGACGCTTCGGTCGGAGAA +
Preference number: 2 (lower is better)
Translates to: QKSTPYSCHEQGIKVEEQSSTIG*DASVGE
Trigger: TTCTCCGACCGAAGCGTCCCAGCCGATTGTGGAAGA...CTGTTCTTCGACTTTGATTCCTTGCTCATGACATGAGTAGGGTGTGCTCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR TCA 90 bp CCAATTAAGTGTTCTATGCGCTGGAAGAGTTCCACATCATACTGTGTGACAAAATGCCGCCATCTTGTGTaGGGTCTCCGGAAGTGGGTC +
Preference number: 2 (lower is better)
Translates to: PIKCSMRWKSSTSYCVTKCRHLV*GLRKWV
Trigger: GACCCACTTCCGGAGACCTCACACAAGATGGCGGCA...TTTTGTCACACAGTATGATGTGGAACTCTTCCAGCGCATAGAACACTTAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR GCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGGTTTTTCTCATCCTTTaGCTTCGGCTCCTAACCCAG +
Preference number: 2 (lower is better)
Translates to: NDRCPRASASKQLGFECLVFLIL*LRLLTQ
Trigger: CTGGGTTAGGAGCCGAAGGCAAAGGATGAGAAAAAC...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGAGAGGACCCAGAGGATaGCACTCTCTCCAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKRGPRG*HSLQSQ
Trigger: CTGAGACTGGAGAGAGTGCCATCCTCTGGGTCCTCT...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGAAGGGCTGATTTGCTCTaGATTCTGGAGTTCTTTGTA +
Preference number: 2 (lower is better)
Translates to: DHGVPREAVRLRESSSRGRADLL*ILEFFV
Trigger: TACAAAGAACTCCAGAATCCAGAGCAAATCAGCCCT...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTCTCATTTTGGCTTCTaGGACACAGTCTGTCCTTGG +
Preference number: 2 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLSHFGF*DTVCPW
Trigger: CCAAGGACAGACTGTGTCCCAGAAGCCAAAATGAGA...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGTCTCATTTTGGCTTCTaGGACACAGTCTGTCCTTGG +
Preference number: 2 (lower is better)
Translates to: NDRCPRASASKQLGFECLSHFGF*DTVCPW
Trigger: CCAAGGACAGACTGTGTCCCAGAAGCCAAAATGAGA...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGCTCTCTCTCTCATTTTaGCTTCTGGGACACAGTCTG +
Preference number: 2 (lower is better)
Translates to: NDRCPRASASKQLGFECLLSLSF*LLGHSL
Trigger: CAGACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAG...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR GCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGCCCATGAGGATGATTTaGTGGCCTCGGTCATTAGGG +
Preference number: 2 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKPMRMI*WPRSLG
Trigger: CCCTAATGACCGAGGCCAGCAAATCATCCTCATGGG...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR GCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCAGGGCTTTGGGGACCTaGCCACTTCAAAAACAGTTT +
Preference number: 2 (lower is better)
Translates to: WVLNHPTTFREGLICSGFRALGT*PLQKQF
Trigger: AAACTGTTTTTGAAGTGGGCAGGTCCCCAAAGCCCT...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAAATGAGGATGATTTGCTaGCCTCGGTCATTAGGGGGA +
Preference number: 2 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKMRMIC*PRSLGG
Trigger: TCCCCCTAATGACCGAGGCCAGCAAATCATCCTCAT...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAAGGAAAAGAAGGGCTTTaGGGACCTGCCCACTTCAAA +
Preference number: 2 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKGKEGL*GPAHFK
Trigger: TTTGAAGTGGGCAGGTCCCCAAAGCCCTTCTTTTCC...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACAGGGCTGATTTGCTCTaGATTCTGGAGTTCTTTGTA +
Preference number: 2 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNRADLL*ILEFFV
Trigger: TACAAAGAACTCCAGAATCCAGAGCAAATCAGCCCT...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAACTTGGAGGACTGGATTaGGAGCCACTCAGGAAAGGC +
Preference number: 2 (lower is better)
Translates to: TIKESNAISSSCPALETQLGGLD*EPLRKG
Trigger: GCCTTTCCTGAGTGGCTCCCAATCCAGTCCTCCAAG...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CAA 90 bp ATCAGAAATTCTGGAATAGAGGCAAACGCCTTCCTCACGCACATTTaGAGGACTTCAAAGACTAGTAGGACTTGGAGAGGACCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: IRNSGIEANAFLTHI*RTSKTSRTWRGPRG
Trigger: TCCTCTGGGTCCTCTCCAAGTCCTACTAGTCTTTGAAGTCCTCAAAATGTGCGTGAGGAAGGCGTTTGCCTCTATTCCAGAATTTCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR TCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGGTCCTCTCTGGGTTCTaGACCATCCTACAACGTTCA +
Preference number: 2 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKVLSGF*TILQRS
Trigger: TGAACGTTGTAGGATGGTTCAGAACCCAGAGAGGAC...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR TCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGTCCCTAGAGAAGCCGTaGGACTTCGTGAAAGCTCAT +
Preference number: 2 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKSLEKP*DFVKAH
Trigger: ATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGA...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR TCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGCTTTTCCAGGTCAAGTaGTACCTTCTGGCAAAATAC +
Preference number: 2 (lower is better)
Translates to: NDRCPRASASKQLGFECLLFQVK*YLLAKY
Trigger: GTATTTTGCCAGAAGGTATCACTTGACCTGGAAAAG...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR TCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGACAGAACAATTCAAATaGTTGCAAGCCCCAGAACCT +
Preference number: 2 (lower is better)
Translates to: NDRCPRASASKQLGFECLTEQFK*LQAPEP
Trigger: AGGTTCTGGGGCTTGCAATCATTTGAATTGTTCTGT...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR GCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGAATCAAGGAAAGCAATaGTATTTCCAGCTCATGCCC +
Preference number: 2 (lower is better)
Translates to: NDRCPRASASKQLGFECLNQGKQ*YFQLMP
Trigger: GGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATT...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR GCA 90 bp CAAAGCTGTTCTCTGGGTATTATTACAGGTGCTGCAGAATATCATAAAGGAGTTACTTGGGTCTCACACTaGGCAGGGTGCTCGTTGCAG +
Preference number: 2 (lower is better)
Translates to: QSCSLGIITGAAEYHKGVTWVSH*AGCSLQ
Trigger: CTGCAACGAGCACCCTGCGCAGTGTGAGACCCAAGT...AACTCCTTTATGATATTCTGCAGCACCTGTAATAATACCCAGAGAACAGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR CCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAGAGTACTTGGAGGACTaGATTGGGAGCCACTCAGGA +
Preference number: 2 (lower is better)
Translates to: TIKESNAISSSCPALETQEYLED*IGSHSG
Trigger: TCCTGAGTGGCTCCCAATCCAGTCCTCCAAGTACTC...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CAA 90 bp ACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCTGGAGTTCTTaGTATCAGAAATTCTGGAATAGAGGCAAACGCCTTCCTCACGCA +
Preference number: 2 (lower is better)
Translates to: TTFREGLICSGFWSS*YQKFWNRGKRLPHA
Trigger: TGCGTGAGGAAGGCGTTTGCCTCTATTCCAGAATTTCTGATACAAAGAACTCCAGAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CAA 90 bp ATATCACGACCTTGTAAGGCCAAAGGAATAGCTTCAATCTGGATCTaGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAAC +
Preference number: 2 (lower is better)
Translates to: ISRPCKAKGIASIWI*VGFVHPNWSQASHN
Trigger: GTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCAGATTGAAGCTATTCCTTTGGCCTTACAAGGTCGTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR TCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCTCCTCACGCACATTTTaGGGACTTCAAAGACTAGTA +
Preference number: 2 (lower is better)
Translates to: WVLNHPTTFREGLICSGFSSRTF*GLQRLV
Trigger: TACTAGTCTTTGAAGTCCTCAAAATGTGCGTGAGGA...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR TCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGAATGATGTCGGGAAATaGAGTTGGCAGTCGCTCCAT +
Preference number: 2 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKNDVGK*SWQSLH
Trigger: ATGGAGCGACTGCCAACTTCATTTCCCGACATCATT...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAGCTCCTAACCCAGCTTaGTGTTTTCCTAAGGGAGCT +
Preference number: 2 (lower is better)
Translates to: TIKESNAISSSCPALETQAPNPA*CFPKGA
Trigger: AGCTCCCTTAGGAAAACACCAAGCTGGGTTAGGAGC...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGAAAAATGCTAGCATCTaGGTGAAACAGTCTAGGAGA +
Preference number: 2 (lower is better)
Translates to: NDRCPRASASKQLGFECLKNASI*VKQSRR
Trigger: TCTCCTAGACTGTTTCACCCAGATGCTAGCATTTTT...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp GTGTCATCATTATCTCCAGCATCCTCTCGCGAGCGTTTCTTCTTTTCTCCATGCTTCGTATTTTCCAAGTaGTCAATCAGTCGACCAGGA +
Preference number: 2 (lower is better)
Translates to: VSSLSPASSRERFFFSPCFVFSK*SISRPG
Trigger: TCCTGGTCGACTGATTGACCACTTGGAAAATACGAA...GCATGGAGAAAAGAAGAAACGCTCGCGAGAGGATGCTGGAGATAATGATGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CAA 90 bp ATTCGGTCGGCTTCATCCATGACCAAGTATTTGAGAGCTCTCAAGTaGAAACCTTTCGTATTTTCCAAGTGGTCAATCAGTCGACCAGGA +
Preference number: 2 (lower is better)
Translates to: IRSASSMTKYLRALK*KPFVFSKWSISRPG
Trigger: TCCTGGTCGACTGATTGACCACTTGGAAAATACGAAAGGTTTCAACTTGAGAGCTCTCAAATACTTGGTCATGGATGAAGCCGACCGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR TCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGAAATGCAGAACCCAGTaGATCTCCTTTATTGTGAAA +
Preference number: 2 (lower is better)
Translates to: NDRCPRASASKQLGFECLKCRTQ*ISFIVK
Trigger: TTTCACAATAAAGGAGATTCACTGGGTTCTGCATTT...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR TCA 90 bp CACATTTCACAGGATTCTTCAGAGCTGCTCGCTGAAGTTTTTGAACCTTCTTGGTTTCTGCAAGCCCAATaGTATCACGACCTTGTAAGG +
Preference number: 2 (lower is better)
Translates to: HISQDSSELLAEVFEPSWFLQAQ*YHDLVR
Trigger: CCTTACAAGGTCGTGATATCATTGGGCTTGCAGAAA...CCAAGAAGGTTCAAAAACTTCAGCGAGCAGCTCTGAAGAATCCTGTGAAATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR GCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAGTTTTTCTCATCCTTTaGCTTCGGCTCCTAACCCAG +
Preference number: 2 (lower is better)
Translates to: TIKESNAISSSCPALETQVFLIL*LRLLTQ
Trigger: CTGGGTTAGGAGCCGAAGGCAAAGGATGAGAAAAAC...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR GCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCTTGTGTCCAAGAATTTaGCTTTCTAACAAGTTCCTG +
Preference number: 2 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFLCPRI*LSNKFL
Trigger: CAGGAACTTGTTAGAAAGGCAAATTCTTGGACACAA...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR GCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTTGTTTAAACTCAGGTTaGTGGGCCCCACAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: FNGAVLLNPENAEPSESPCLNSG*WAPQPE
Trigger: CTCTGGCTGTGGGGCCCAGCAACCTGAGTTTAAACA...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTCACCAGGGTCCTCTCTaGGTTCTGAACCATCCTACA +
Preference number: 2 (lower is better)
Translates to: FNGAVLLNPENAEPSESPHQGPL*VLNHPT
Trigger: TGTAGGATGGTTCAGAACCCAGAGAGGACCCTGGTG...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTGAGTACTTGGAGGACTaGATTGGGAGCCACTCAGGA +
Preference number: 2 (lower is better)
Translates to: FNGAVLLNPENAEPSESPEYLED*IGSHSG
Trigger: TCCTGAGTGGCTCCCAATCCAGTCCTCCAAGTACTC...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp TCCTGTGTTGGAAAACCTGGTAGTTTCTTCCCAATTAAGTGTTCTATGCGCTGGCTTCAATCTGGATCTTaGTGGGTTTTGTCCATCCCA +
Preference number: 2 (lower is better)
Translates to: SCVGKPGSFFPIKCSMRWLQSGS*WVLSIP
Trigger: TGGGATGGACAAAACCCACCAAGATCCAGATTGAAG...CCAGCGCATAGAACACTTAATTGGGAAGAAACTACCAGGTTTTCCAACACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CAA 90 bp TGTCCAAGAATTTGCCTTTCTAACAAGTTCCTGGGTGATGTTAATTaGCCATTCCAGGGACTACACTATATGAGCCAGCACCATCATGCT +
Preference number: 2 (lower is better)
Translates to: CPRICLSNKFLGDVN*PFQGLHYMSQHHHA
Trigger: AGCATGATGGTGCTGGCTCATATAGTGTAGTCCCTGGAATGGCAAATTAACATCACCCAGGAACTTGTTAGAAAGGCAAATTCTTGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR TCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGGAAAAAGAATCTCCCTaGAGGAGAGAGACAATCAAG +
Preference number: 2 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKEKESP*RRETIK
Trigger: CTTGATTGTCTCTCTCCTTCAGGGAGATTCTTTTTC...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR GCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTCATCACTGGGAAGGGTaGGGACAGATTGGGTACATT +
Preference number: 2 (lower is better)
Translates to: FNGAVLLNPENAEPSESPHHWEG*GQIGYI
Trigger: AATGTACCCAATCTGTCCGCACCCTTCCCAGTGATG...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTTCTAACAAGTTCCTaGGTGATGTTAATTTGCCAT +
Preference number: 2 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLFLTSS*VMLICH
Trigger: ATGGCAAATTAACATCACCCAGGAACTTGTTAGAAA...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp AATATCATTTGCAGATGTCCAAGCTTCTTTACAATTACAGGTCATGGGCATCATATTCGGGCAAACCTTTaGGCTTCAGCGACGCGTTCT +
Preference number: 2 (lower is better)
Translates to: NIICRCPSFFTITGHGHHIRANL*ASATRS
Trigger: AGAACGCGTCGCTGAAGCCCAAAGGTTTGCCCGAAT...ATGATGCCCATGACCTGTAATTGTAAAGAAGCTTGGACATCTGCAAATGATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR GCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAATGGGTGATGTTAATTTaGCATTCCAGGGACTACACT +
Preference number: 2 (lower is better)
Translates to: TIKESNAISSSCPALETQWVMLI*HSRDYT
Trigger: AGTGTAGTCCCTGGAATGGCAAATTAACATCACCCA...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CCA 90 bp AATTCTCTTTTACAGAACAGCAGAACTCGAGCCTTCATAAAAGTGATTAACGGCGAACCTTCTTGGTCATaGTGGCAGAGAAGAGGAATG +
Preference number: 2 (lower is better)
Translates to: NSLLQNSRTRAFIKVINGEPSWS*WQRRGM
Trigger: CATTCCTCTTCTCTGCCACCATGACCAAGAAGGTTC...GCCGTTAATCACTTTTATGAAGGCTCGAGTTCTGCTGTTCTGTAAAAGAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR CCA 90 bp CCAATTAAGTGTTCTATGCGCTGGAAGAGTTCCACATCATACTGTGTGACAAAAAGCAAAGCTGTTCTCTaGGTATTATTACAGGTGCTG +
Preference number: 2 (lower is better)
Translates to: PIKCSMRWKSSTSYCVTKSKAVL*VLLQVL
Trigger: CAGCACCTGTAATAATACCCAGAGAACAGCTTTGCT...TTTTGTCACACAGTATGATGTGGAACTCTTCCAGCGCATAGAACACTTAATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CAA 90 bp AAATCCATATTCAGTATTCGGTCGGCTTCATCCATGACCAAGTATTaGAGAGCTCTCAAGTTGAAACCTTTCGTATTTTCCAAGTGGTCA +
Preference number: 2 (lower is better)
Translates to: KSIFSIRSASSMTKY*RALKLKPFVFSKWS
Trigger: TGACCACTTGGAAAATACGAAAGGTTTCAACTTGAGAGCTCTCAAATACTTGGTCATGGATGAAGCCGACCGAATACTGAATATGGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR GCA 90 bp AATTCTCTTTTACAGAACAGCAGAACTCGAGCCTTCATAAAAGTGATTAACGGCAGGATTCTTCAGAGCTaGTCGCTGAAGTTTTTGAAC +
Preference number: 2 (lower is better)
Translates to: NSLLQNSRTRAFIKVINGRILQS*SLKFLN
Trigger: GTTCAAAAACTTCAGCGAGCAGCTCTGAAGAATCCT...GCCGTTAATCACTTTTATGAAGGCTCGAGTTCTGCTGTTCTGTAAAAGAGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR TCA 72 bp CGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGTaGGGTCTCCGGAAGTGGGTCTGCGGCGCGCGGGAT +
Preference number: 3 (lower is better)
Translates to: RRIVFLGCRHLV*GLRKWVCGARD
Trigger: ATCCCGCGCGCCGCAGACCCACTTCCGGAGACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
3UTR CCA 72 bp CCATGGCCAGCGAGTGCCCTCCTGTGGCCTGTCACTTaGGTCTCACACTGCGCAGGGTGCTCGTTGCAGTTT +
Preference number: 3 (lower is better)
Translates to: PWPASALLWPVT*VSHCAGCSLQF
Trigger: AAACTGCAACGAGCACCCTGCGCAGTGTGAGACCCAAGTGACAGGCCACAGGAGGGCACTCGCTGGCCATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR CAA 90 bp CGGCTGGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGATTCAGAGCTGTATGTaGCATGCCCCATGGCCAGCG +
Preference number: 3 (lower is better)
Translates to: RLGRFGRRIVFLGCRHLVIQSCM*HAPWPA
Trigger: CGCTGGCCATGGGGCATGCAACATACAGCTCTGAAT...CACAAGATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR GCA 72 bp TCAGAGCTGTATGTTGCATGCCCCATGGCCAGCGAGTaGCCTCCTGTGGCCTGTCACTTGGGTCTCACACTG +
Preference number: 3 (lower is better)
Translates to: SELYVACPMASE*PPVACHLGLTL
Trigger: CAGTGTGAGACCCAAGTGACAGGCCACAGGAGGGCACTCGCTGGCCATGGGGCATGCAACATACAGCTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CCA 72 bp TCAAAGACTAGTAGGACTTGGAGAGGACCCAGAGGATaGCACTCTCTCCAGTCTCAGGCCAAGCCACCAGGG +
Preference number: 3 (lower is better)
Translates to: SKTSRTWRGPRG*HSLQSQAKPPG
Trigger: CCCTGGTGGCTTGGCCTGAGACTGGAGAGAGTGCCATCCTCTGGGTCCTCTCCAAGTCCTACTAGTCTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 72 bp AAGCAGCAAATTCAGAGCTGTATGTTGCATGCCCCATaGCCAGCGAGTGCCCTCCTGTGGCCTGTCACTTGG +
Preference number: 3 (lower is better)
Translates to: KQQIQSCMLHAP*PASALLWPVTW
Trigger: CCAAGTGACAGGCCACAGGAGGGCACTCGCTGGCCATGGGGCATGCAACATACAGCTCTGAATTTGCTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CCA 72 bp ACAAACGCTGCGGGGTCTCCAGCAGTGCGTTTAGAATaGGCAAAGCAAAGGCGCCTGTCTTTCCAGAGCCAG +
Preference number: 3 (lower is better)
Translates to: TNAAGSPAVRLE*AKQRRLSFQSQ
Trigger: CTGGCTCTGGAAAGACAGGCGCCTTTGCTTTGCCCATTCTAAACGCACTGCTGGAGACCCCGCAGCGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR GCA 72 bp TCCCGAGTCGGGGTAAGAACTAGGGCAAACAAACGCTaGGGGGTCTCCAGCAGTGCGTTTAGAATGGGCAAA +
Preference number: 3 (lower is better)
Translates to: SRVGVRTRANKR*GVSSSAFRMGK
Trigger: TTTGCCCATTCTAAACGCACTGCTGGAGACCCCGCAGCGTTTGTTTGCCCTAGTTCTTACCCCGACTCGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CCA 72 bp GGGAAGAGGAGGAGATATCAGCACCAGGGTCCTCTCTaGGTTCTGAACCATCCTACAACGTTCAGAGAAGGG +
Preference number: 3 (lower is better)
Translates to: GKRRRYQHQGPL*VLNHPTTFREG
Trigger: CCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCAGAGAGGACCCTGGTGCTGATATCTCCTCCTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGATCCCATGAGGATGATTaGCTGGCCTCGGTCATTAGG +
Preference number: 3 (lower is better)
Translates to: DHGVPREAVRLRESSSRGSHEDD*LASVIR
Trigger: CCTAATGACCGAGGCCAGCAAATCATCCTCATGGGA...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGATTGTTTAAACTCAGGTaGCTGGGCCCCACAGCCAGA +
Preference number: 3 (lower is better)
Translates to: DHGVPREAVRLRESSSRGLFKLR*LGPTAR
Trigger: TCTGGCTGTGGGGCCCAGCAACCTGAGTTTAAACAA...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp GGATCTTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACACATTCGGGTGCCGCCATCTaGTGTGAGGTCTCCGGAAGT +
Preference number: 3 (lower is better)
Translates to: GSWWVLSIPTGHKLHTTHSGAAI*CEVSGS
Trigger: ACTTCCGGAGACCTCACACAAGATGGCGGCACCCGA...ATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
3UTR-3UTR CAA 90 bp CAGAAGAGCACACCCTACTCATGTCATGAGCAAGGAATCAAAGTCGAAGAACAGCCTGTGGCCTGTCACTaGGGTCTCACACTGCGCAGG +
Preference number: 3 (lower is better)
Translates to: QKSTPYSCHEQGIKVEEQPVACH*GLTLRR
Trigger: CCTGCGCAGTGTGAGACCCAAGTGACAGGCCACAGG...CTGTTCTTCGACTTTGATTCCTTGCTCATGACATGAGTAGGGTGTGCTCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR TCA 72 bp AATGGGCTTTTAGTGTTACATCCCTTGTTCATACGGTaGGACACTGCCCCAGGGTGCACGTACGCGTGCTCT +
Preference number: 3 (lower is better)
Translates to: NGLLVLHPLFIR*DTAPGCTYACS
Trigger: AGAGCACGCGTACGTGCACCCTGGGGCAGTGTCTCACCGTATGAACAAGGGATGTAACACTAAAAGCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR GCA 72 bp TTTAGTGTTACATCCCTTGTTCATACGGTGAGACACTaGCCCAGGGTGCACGTACGCGTGCTCTCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: FSVTSLVHTVRH*PRVHVRVLSLS
Trigger: AGAGAGAGAGAGCACGCGTACGTGCACCCTGGGGCAGTGTCTCACCGTATGAACAAGGGATGTAACACTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR GCA 72 bp CCAGCATCCTCTCGCGAGCGTTTCTTCTTTTCTCCATaGTCCCTTAACTCCATTCGGGCAAACCTTTGGGCT +
Preference number: 3 (lower is better)
Translates to: PASSRERFFFSP*SLNSIRANLWA
Trigger: AGCCCAAAGGTTTGCCCGAATGGAGTTAAGGGAGCATGGAGAAAAGAAGAAACGCTCGCGAGAGGATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CCA 72 bp TGTCGGGAAATGAAGTTGGCAGTCGCTCCATCTATCTaGCCCTCAGCTTCATGTGAGGGAGCAGGACTTAGA +
Preference number: 3 (lower is better)
Translates to: CREMKLAVAPSI*PSASCEGAGLR
Trigger: TCTAAGTCCTGCTCCCTCACATGAAGCTGAGGGCCAGATAGATGGAGCGACTGCCAACTTCATTTCCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 72 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTaGCTTCTGGGACACAGTCTGTCCTTGGTCATCTGT +
Preference number: 3 (lower is better)
Translates to: ARTRALSLSLSF*LLGHSLSLVIC
Trigger: ACAGATGACCAAGGACAGACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 72 bp TCTCCATGCTCCCTTAACTCCATTCGGGCAAACCTTTaGGCTTCAGCGACGCGTTCTGTCAGCATCATAACC +
Preference number: 3 (lower is better)
Translates to: SPCSLNSIRANL*ASATRSVSIIT
Trigger: GGTTATGATGCTGACAGAACGCGTCGCTGAAGCCCAAAGGTTTGCCCGAATGGAGTTAAGGGAGCATGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR CAA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGACAGAGAAGGGCTGATTaGCTCTGGATTCTGGAGTTC +
Preference number: 3 (lower is better)
Translates to: DHGVPREAVRLRESSSRGQRRAD*LWILEF
Trigger: GAACTCCAGAATCCAGAGCAAATCAGCCCTTCTCTG...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGACTTGGAGGACTGGATaGGGAGCCACTCAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: NDRCPRASASKQLGFECLTWRTG*GATQER
Trigger: CCTTTCCTGAGTGGCTCCCAATCCAGTCCTCCAAGT...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGTCCCATGAGGATGATTaGCTGGCCTCGGTCATTAGG +
Preference number: 3 (lower is better)
Translates to: NDRCPRASASKQLGFECLSHEDD*LASVIR
Trigger: CCTAATGACCGAGGCCAGCAAATCATCCTCATGGGA...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGTTGTTTAAACTCAGGTaGCTGGGCCCCACAGCCAGA +
Preference number: 3 (lower is better)
Translates to: NDRCPRASASKQLGFECLLFKLR*LGPTAR
Trigger: TCTGGCTGTGGGGCCCAGCAACCTGAGTTTAAACAA...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGGGACACAGTCTGTCCTaGGTCATCTGTGAACGACTC +
Preference number: 3 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLGHSLS*VICERL
Trigger: GAGTCGTTCACAGATGACCAAGGACAGACTGTGTCC...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp TCCTGTGTTGGAAAACCTGGTAGTTTCTTCCCAATTAAGTGTTCTATGCGCTGGCCTGAGGATGGGAAGTaGGGGGCAATCTGGTGTCCG +
Preference number: 3 (lower is better)
Translates to: SCVGKPGSFFPIKCSMRWPEDGK*GAIWCP
Trigger: CGGACACCAGATTGCCCCCAACTTCCCATCCTCAGG...CCAGCGCATAGAACACTTAATTGGGAAGAAACTACCAGGTTTTCCAACACAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR GCA 72 bp GACCCCAGTACTGAAATTATACTTCCTCAGACATACTaGCCCATCACTGGGAAGGGTGCGGACAGATTGGGT +
Preference number: 3 (lower is better)
Translates to: DPSTEIILPQTY*PITGKGADRLG
Trigger: ACCCAATCTGTCCGCACCCTTCCCAGTGATGGGGCAGTATGTCTGAGGAAGTATAATTTCAGTACTGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 72 bp CAACCACATCTACATGAGGTATGTCCAAACCTCGGCTaGCAACGTCAGTTGCTAGAAGAATGGAACGGGCCT +
Preference number: 3 (lower is better)
Translates to: QPHLHEVCPNLG*QRQLLEEWNGP
Trigger: AGGCCCGTTCCATTCTTCTAGCAACTGACGTTGCCAGCCGAGGTTTGGACATACCTCATGTAGATGTGGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR CAA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTGTCGGGAAATGAAGTaGGCAGTCGCTCCATCTATC +
Preference number: 3 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLCREMK*AVAPSI
Trigger: GATAGATGGAGCGACTGCCAACTTCATTTCCCGACA...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 72 bp ACGCACATTTTGAGGACTTCAAAGACTAGTAGGACTTaGAGAGGACCCAGAGGATGGCACTCTCTCCAGTCT +
Preference number: 3 (lower is better)
Translates to: THILRTSKTSRT*RGPRGWHSLQS
Trigger: AGACTGGAGAGAGTGCCATCCTCTGGGTCCTCTCCAAGTCCTACTAGTCTTTGAAGTCCTCAAAATGTGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 72 bp GTGCTCGTTGCAGTTTTATTCCTGAGGATGGGAAGTTaGGGGCAATCTGGTGTCCGTCACCAGAAATCAAAG +
Preference number: 3 (lower is better)
Translates to: VLVAVLFLRMGS*GQSGVRHQKSK
Trigger: CTTTGATTTCTGGTGACGGACACCAGATTGCCCCCAACTTCCCATCCTCAGGAATAAAACTGCAACGAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR TCA 72 bp TACTCTGACTCATTTGTCCATGGAGGGGGATGGCAGTaGAGCCAAGATTTCGCAGTAGCAAAGCTGTTCTCT +
Preference number: 3 (lower is better)
Translates to: YSDSFVHGGGWQ*SQDFAVAKLFS
Trigger: AGAGAACAGCTTTGCTACTGCGAAATCTTGGCTTCACTGCCATCCCCCTCCATGGACAAATGAGTCAGAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CCA 72 bp TCAATCTGGATCTTGGTGGGTTTTGTCCATCCCAACTaGTCACAAGCTTCACACAACACATCTGTCACACCC +
Preference number: 3 (lower is better)
Translates to: SIWILVGFVHPN*SQASHNTSVTP
Trigger: GGGTGTGACAGATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCAGATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR CAA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCAGTTTTTCTCATCCTTaGCCTTCGGCTCCTAACCCA +
Preference number: 3 (lower is better)
Translates to: WVLNHPTTFREGLICSGFSFSHP*PSAPNP
Trigger: TGGGTTAGGAGCCGAAGGCAAAGGATGAGAAAAACT...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp CACATTTCACAGGATTCTTCAGAGCTGCTCGCTGAAGTTTTTGAACCTTCTTGGGGATCTTGGTGGGTTTaGTCCATCCCAACTGGTCAC +
Preference number: 3 (lower is better)
Translates to: HISQDSSELLAEVFEPSWGSWWV*SIPTGH
Trigger: GTGACCAGTTGGGATGGACAAAACCCACCAAGATCC...CCAAGAAGGTTCAAAAACTTCAGCGAGCAGCTCTGAAGAATCCTGTGAAATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR CAA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGAACCACCCAGAGAAATaGTTTAAACTCAGGTTGCTG +
Preference number: 3 (lower is better)
Translates to: NDRCPRASASKQLGFECLNHPEK*FKLRLL
Trigger: CAGCAACCTGAGTTTAAACAATTTCTCTGGGTGGTT...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGATAAGACAAGCGATTTaGTCTGTCACCCAGAAGACA +
Preference number: 3 (lower is better)
Translates to: NDRCPRASASKQLGFECLIRQAI*SVTQKT
Trigger: TGTCTTCTGGGTGACAGACAAAATCGCTTGTCTTAT...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp GTGTCATCATTATCTCCAGCATCCTCTCGCGAGCGTTTCTTCTTTTCTCCATGCCCTCATCATCCTGTGTaGGAAAACCTGGTAGTTTCT +
Preference number: 3 (lower is better)
Translates to: VSSLSPASSRERFFFSPCPHHPV*ENLVVS
Trigger: AGAAACTACCAGGTTTTCCAACACAGGATGATGAGG...GCATGGAGAAAAGAAGAAACGCTCGCGAGAGGATGCTGGAGATAATGATGACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR TCA 72 bp TGGGTAGGAATGTCAAAGTTGACAACCACATCTACATaGGGTATGTCCAAACCTCGGCTGGCAACGTCAGTT +
Preference number: 3 (lower is better)
Translates to: WVGMSKLTTTST*GMSKPRLATSV
Trigger: AACTGACGTTGCCAGCCGAGGTTTGGACATACCTCATGTAGATGTGGTTGTCAACTTTGACATTCCTACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CCA 72 bp TTTTCTCATCCTTTGCCTTCGGCTCCTAACCCAGCTTaGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCA +
Preference number: 3 (lower is better)
Translates to: FSHPLPSAPNPA*CFPKGATNSGA
Trigger: TGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAGCTGGGTTAGGAGCCGAAGGCAAAGGATGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 72 bp CTGCTCGCTGAAGTTTTTGAACCTTCTTGGTCATGGTaGCAGAGAAGAGGAATGTTTTCCGATCTCGAGGAA +
Preference number: 3 (lower is better)
Translates to: LLAEVFEPSWSW*QRRGMFSDLEE
Trigger: TTCCTCGAGATCGGAAAACATTCCTCTTCTCTGCCACCATGACCAAGAAGGTTCAAAAACTTCAGCGAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR CAA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTGGGAAAAGAAGGGCTTaGGGGACCTGCCCACTTCAA +
Preference number: 3 (lower is better)
Translates to: FNGAVLLNPENAEPSESPGKRRA*GTCPLQ
Trigger: TTGAAGTGGGCAGGTCCCCAAAGCCCTTCTTTTCCC...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGTCTCTCTCTCTCATTTaGGCTTCTGGGACACAGTCT +
Preference number: 3 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKSLSLI*ASGTQS
Trigger: AGACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGA...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR GCA 72 bp TTTGACTTTGACACCTACCATATTGGAAATGACAGGTaGCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTC +
Preference number: 3 (lower is better)
Translates to: FDFDTYHIGNDR*PRASASKQLGF
Trigger: GAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATTTCCAATATGGTAGGTGTCAAAGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR GCA 72 bp AGAGGAAACGGCACATTTCACAGGATTCTTCAGAGCTaGTCGCTGAAGTTTTTGAACCTTCTTGGTCATGGT +
Preference number: 3 (lower is better)
Translates to: RGNGTFHRILQS*SLKFLNLLGHG
Trigger: ACCATGACCAAGAAGGTTCAAAAACTTCAGCGAGCAGCTCTGAAGAATCCTGTGAAATGTGCCGTTTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CCA 72 bp AGTTTTATTCCTGAGGATGGGAAGTTGGGGGCAATCTaGTGTCCGTCACCAGAAATCAAAGGCACTTCAAAA +
Preference number: 3 (lower is better)
Translates to: SFIPEDGKLGAI*CPSPEIKGTSK
Trigger: TTTTGAAGTGCCTTTGATTTCTGGTGACGGACACCAGATTGCCCCCAACTTCCCATCCTCAGGAATAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR CAA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAAGTTTTTCTCATCCTTaGCCTTCGGCTCCTAACCCA +
Preference number: 3 (lower is better)
Translates to: TIKESNAISSSCPALETQSFSHP*PSAPNP
Trigger: TGGGTTAGGAGCCGAAGGCAAAGGATGAGAAAAACT...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGGGATTCTGGAGTTCTTaGTATCAGAAATTCTGGAAT +
Preference number: 3 (lower is better)
Translates to: NDRCPRASASKQLGFECLGFWSS*YQKFWN
Trigger: ATTCCAGAATTTCTGATACAAAGAACTCCAGAATCC...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGTTCCTCACGCACATTTaGAGGACTTCAAAGACTAGT +
Preference number: 3 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKFLTHI*RTSKTS
Trigger: ACTAGTCTTTGAAGTCCTCAAAATGTGCGTGAGGAA...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTCAGAGAAGGGCTGATTaGCTCTGGATTCTGGAGTTC +
Preference number: 3 (lower is better)
Translates to: FNGAVLLNPENAEPSESPQRRAD*LWILEF
Trigger: GAACTCCAGAATCCAGAGCAAATCAGCCCTTCTCTG...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp ATGGTGGCAGAGAAGAGGAATGTTTTCCGATCTCGAGGAATCACTTTGAGGATCTCCATGACCAAGTATTaGAGAGCTCTCAAGTTGAAA +
Preference number: 3 (lower is better)
Translates to: MVAEKRNVFRSRGITLRISMTKY*RALKLK
Trigger: TTTCAACTTGAGAGCTCTCAAATACTTGGTCATGGA...GATCCTCAAAGTGATTCCTCGAGATCGGAAAACATTCCTCTTCTCTGCCACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR GCA 72 bp CTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTaGTCTGGATTCTGGAGTTCTTTGTATCAGAAATTC +
Preference number: 3 (lower is better)
Translates to: LNHPTTFREGLI*SGFWSSLYQKF
Trigger: GAATTTCTGATACAAAGAACTCCAGAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR GCA 72 bp AGCTTCCATTACAAGCTTAAACTCAGCTCCTGGTCTTaGCATTCAAGACTCTCCACACTTACTTCAAAGGAT +
Preference number: 3 (lower is better)
Translates to: SFHYKLKLSSWS*HSRLSTLTSKD
Trigger: ATCCTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAGCTTGTAATGGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR GCA 72 bp ACTTCCTCAGACATACTGCCCCATCACTGGGAAGGGTaGGGACAGATTGGGTACATTTATAGAATATTAAAT +
Preference number: 3 (lower is better)
Translates to: TSSDILPHHWEG*GQIGYIYRILN
Trigger: ATTTAATATTCTATAAATGTACCCAATCTGTCCGCACCCTTCCCAGTGATGGGGCAGTATGTCTGAGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 72 bp CCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTaGATTCTGGAGTTCTTTGTATCAGAAATTCTGGAA +
Preference number: 3 (lower is better)
Translates to: PSYNVQRRADLL*ILEFFVSEILE
Trigger: TTCCAGAATTTCTGATACAAAGAACTCCAGAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 72 bp ATCATCTTTGTTTTACACAGTCTCAGAGAGATTAGGTaGCTACACTCACACAGTAGTGACAAAGCCTGTCTC +
Preference number: 3 (lower is better)
Translates to: IIFVLHSLREIR*LHSHSSDKACL
Trigger: GAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCCACCTAATCTCTCTGAGACTGTGTAAAACAAAGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAATTCCTCACGCACATTTaGAGGACTTCAAAGACTAGT +
Preference number: 3 (lower is better)
Translates to: TIKESNAISSSCPALETQFLTHI*RTSKTS
Trigger: ACTAGTCTTTGAAGTCCTCAAAATGTGCGTGAGGAA...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAAACCACCCAGAGAAATaGTTTAAACTCAGGTTGCTG +
Preference number: 3 (lower is better)
Translates to: TIKESNAISSSCPALETQNHPEK*FKLRLL
Trigger: CAGCAACCTGAGTTTAAACAATTTCTCTGGGTGGTT...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTTCTCTCTCTCTCATTTaGGCTTCTGGGACACAGTCT +
Preference number: 3 (lower is better)
Translates to: FNGAVLLNPENAEPSESPSLSLI*ASGTQS
Trigger: AGACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGA...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTCCCAGAAGACATAACTaGATAGGACATCAGGCTTGC +
Preference number: 3 (lower is better)
Translates to: FNGAVLLNPENAEPSESPPRRHN*IGHQAC
Trigger: GCAAGCCTGATGTCCTATCAAGTTATGTCTTCTGGG...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR-3UTR CAA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTACAGAGGCACCGTTTTaGCATGTATGGTCCCAAAGA +
Preference number: 3 (lower is better)
Translates to: FNGAVLLNPENAEPSESPTEAPF*HVWSQR
Trigger: TCTTTGGGACCATACATGCAAAAACGGTGCCTCTGT...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 72 bp GTGAAGCCAAGATTTCGCAGTAGCAAAGCTGTTCTCTaGGTATTATTACAGGTGCTGCAGAATATCATAAAG +
Preference number: 3 (lower is better)
Translates to: VKPRFRSSKAVL*VLLQVLQNIIK
Trigger: CTTTATGATATTCTGCAGCACCTGTAATAATACCCAGAGAACAGCTTTGCTACTGCGAAATCTTGGCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR CCA 72 bp CCTGGTAGTTTCTTCCCAATTAAGTGTTCTATGCGCTaGAAGAGTTCCACATCATACTGTGTGACAAAAGTA +
Preference number: 3 (lower is better)
Translates to: PGSFFPIKCSMR*KSSTSYCVTKV
Trigger: TACTTTTGTCACACAGTATGATGTGGAACTCTTCCAGCGCATAGAACACTTAATTGGGAAGAAACTACCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR-3UTR CAA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGGGATTCTGGAGTTCTTaGTATCAGAAATTCTGGAAT +
Preference number: 3 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKGFWSS*YQKFWN
Trigger: ATTCCAGAATTTCTGATACAAAGAACTCCAGAATCC...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR GCA 72 bp GTTAGCATTTGTTGCAGTGATTTTCAAACCTTAGTGTaGCGCAGAACCACCCAGAGAAATTGTTTAAACTCA +
Preference number: 3 (lower is better)
Translates to: VSICCSDFQTLV*RRTTQRNCLNS
Trigger: TGAGTTTAAACAATTTCTCTGGGTGGTTCTGCGGCACACTAAGGTTTGAAAATCACTGCAACAAATGCTAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR GCA 72 bp AATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTaGCTTAGAAACTCAAACTTAATCTCATCTCTTGCA +
Preference number: 3 (lower is better)
Translates to: NQGKQCYFQLMP*LRNSNLISSLA
Trigger: TGCAAGAGATGAGATTAAGTTTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR GCA 72 bp AGAGTTGCTACATTTAACTGTATCCCCATTTATCTCTaGACGATGTCTTTATCTCAGTGTCTCAATTCACAC +
Preference number: 3 (lower is better)
Translates to: RVATFNCIPIYL*TMSLSQCLNSH
Trigger: GTGTGAATTGAGACACTGAGATAAAGACATCGTGCAGAGATAAATGGGGATACAGTTAAATGTAGCAACTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CCA 72 bp CACAATTCTGACCAATTTCAGTCTCATGATCTCTGTTaGAGCAGGTTTCATTCTCCAATTCTCTTTTACAGA +
Preference number: 3 (lower is better)
Translates to: HNSDQFQSHDLC*SRFHSPILFYR
Trigger: TCTGTAAAAGAGAATTGGAGAATGAAACCTGCTCCAACAGAGATCATGAGACTGAAATTGGTCAGAATTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
3UTR TCA 72 bp TTTCCTGAACTAAATAGATTCCTTTTCCAGGTCAAGTaGTACCTTCTGGCAAAATACCTTCAGGATAAATAT +
Preference number: 3 (lower is better)
Translates to: FPELNRFLFQVK*YLLAKYLQDKY
Trigger: ATATTTATCCTGAAGGTATTTTGCCAGAAGGTATCACTTGACCTGGAAAAGGAATCTATTTAGTTCAGGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GGACGACGTGCTCTGCGCGCCCCCTGCGGGCTTGCCGGGGATTGCACCCGTCCGCTGGCCCGCAGCCGGTaGCACGGCGCGCGGAACATC +
Preference number: 4 (lower is better)
Translates to: GRRALRAPCGLAGDCTRPLARSR*HGARNI
Trigger: GATGTTCCGCGCGCCGTGTCACCGGCTGCGGGCCAG...CGGACGGGTGCAATCCCCGGCAAGCCCGCAGGGGGCGCGCAGAGCACGTCGTCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR TCA 90 bp CGGACGACGTGCTCTGCGCGCCCCCTGCGGGCTTGCCGGGGATTGCACCCGTCCCTGGCCCGCAGCCGGTaGCACGGCGCGCGGAACATC +
Preference number: 4 (lower is better)
Translates to: RTTCSARPLRACRGLHPSLARSR*HGARNI
Trigger: GATGTTCCGCGCGCCGTGTCACCGGCTGCGGGCCAG...GGACGGGTGCAATCCCCGGCAAGCCCGCAGGGGGCGCGCAGAGCACGTCGTCCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR CCA 90 bp GGACGACGTGCTCTGCGCGCCCCCTGCGGGCTTGCCGGGGATTGCACCCGTCCGCCTTCCGAGTACCCCTaGCCCGCAGCCGGTGACACG +
Preference number: 4 (lower is better)
Translates to: GRRALRAPCGLAGDCTRPPSEYP*PAAGDT
Trigger: CGTGTCACCGGCTGCGGGCCAGGGGTACTCGGAAGG...CGGACGGGTGCAATCCCCGGCAAGCCCGCAGGGGGCGCGCAGAGCACGTCGTCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR TCA 90 bp CGGGGATTGCACCCGTCCGCTAGGCAGGTGGGGCCCAGTGAATATGGGCGCGTAGAAGCTGCAGATCGCTaGCCGCCCCGCGCACCCCCG +
Preference number: 4 (lower is better)
Translates to: RGLHPSARQVGPSEYGRVEAADR*PPRAPP
Trigger: CGGGGGTGCGCGGGGCGGTCAGCGATCTGCAGCTTC...TACGCGCCCATATTCACTGGGCCCCACCTGCCTAGCGGACGGGTGCAATCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR GCA 90 bp GCCGGGGATTGCACCCGTCCGCTAGGCAGGTGGGGCCCAGTGAATATGGGCGCGGGGCTTGCCGGGGATTaGACCCGTCCGCTAGGCAGG +
Preference number: 4 (lower is better)
Translates to: AGDCTRPLGRWGPVNMGAGLAGD*TRPLGR
Trigger: CCTGCCTAGCGGACGGGTGCAATCCCCGGCAAGCCC...CGCGCCCATATTCACTGGGCCCCACCTGCCTAGCGGACGGGTGCAATCCCCGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR GCA 90 bp GCTTGCCGGGGATTGCACCCGTCCGCTAGGCAGGTGGGGCCCAGTGAATATGGGTCTCCCCGGACGACGTaGTCTGCGCGCCCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: ACRGLHPSARQVGPSEYGSPRTT*SARPLR
Trigger: CCGCAGGGGGCGCGCAGAGCACGTCGTCCGGGGAGA...CCCATATTCACTGGGCCCCACCTGCCTAGCGGACGGGTGCAATCCCCGGCAAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR GCA 90 bp CACAATCGGCTGGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATCCGGACGACGTGCTCTaGGCGCCCCCTGCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: HNRLGRFGRRIVFLGCRHPDDVL*APPAGL
Trigger: CAAGCCCGCAGGGGGCGCGCAGAGCACGTCGTCCGG...ATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCGATTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR TCA 90 bp TTGTGTGAGGTCTCCGGAAGTGGGTCTGCGGCGCGCGGGATGCTGGGAAATGTAGAAGCTGCAGATCGCTaGCCGCCCCGCGCACCCCCG +
Preference number: 4 (lower is better)
Translates to: LCEVSGSGSAARGMLGNVEAADR*PPRAPP
Trigger: CGGGGGTGCGCGGGGCGGTCAGCGATCTGCAGCTTC...TACATTTCCCAGCATCCCGCGCGCCGCAGACCCACTTCCGGAGACCTCACACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR GCA 90 bp TGGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGTGAGCGCCCCCTGCGGGCTTaGCGGGGATTGCACCCGTCC +
Preference number: 4 (lower is better)
Translates to: WDASVGESCSSGAAILCERPLRA*RGLHPS
Trigger: GGACGGGTGCAATCCCCGGCAAGCCCGCAGGGGGCG...CTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR TCA 90 bp CACCCGTCCGCTAGGCAGGTGGGGCCCAGTGAATATGGGCGCGTAGGCCAGAAAGCAGGTGGGGCCCAGTaGATATGGGCGCGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: HPSARQVGPSEYGRVGQKAGGAQ*IWARRP
Trigger: TGGCCTACGCGCCCATATTCACTGGGCCCCACCTGC...TTTCTGGCCTACGCGCCCATATTCACTGGGCCCCACCTGCCTAGCGGACGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540583.5
CDS-3UTR CCA 90 bp GCTTGCCGGGGATTGCACCCGTCCGCTAGGCAGGTGGGGCCCAGTGAATATGGGCGTCCGCTAGGCAGGTaGGGCCCAGTGAATATGGGC +
Preference number: 4 (lower is better)
Translates to: ACRGLHPSARQVGPSEYGRPLGR*GPVNMG
Trigger: GCCCATATTCACTGGGCCCCACCTGCCTAGCGGACG...CCCATATTCACTGGGCCCCACCTGCCTAGCGGACGGGTGCAATCCCCGGCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
3UTR CAA 72 bp TCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTaGTGTGAGGTCTCCGGAAGTGGGTCTGCGGCGCGC +
Preference number: 4 (lower is better)
Translates to: SVGESCSSGAAI*CEVSGSGSAAR
Trigger: GCGCGCCGCAGACCCACTTCCGGAGACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGACCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR TCA 90 bp CTGCGGGCTTGCCGGGGATTGCACCCGTCCGCTAGGCAGGTGGGGCCCAGTGAACGCGCGGAACATCCGTaGACGAGTTGGGTTACATCT +
Preference number: 4 (lower is better)
Translates to: LRACRGLHPSARQVGPSERAEHP*TSWVTS
Trigger: AGATGTAACCCAACTCGTTCACGGATGTTCCGCGCG...TTCACTGGGCCCCACCTGCCTAGCGGACGGGTGCAATCCCCGGCAAGCCCGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR GCA 90 bp TTGTGTGAGGTCTCCGGAAGTGGGTCTGCGGCGCGCGGGATGCTGGGAAATGTACTGTCCCCGCGAAGCTaGAGATCGCTGACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: LCEVSGSGSAARGMLGNVLSPRS*RSLTAP
Trigger: CGGGGCGGTCAGCGATCTGCAGCTTCGCGGGGACAG...TACATTTCCCAGCATCCCGCGCGCCGCAGACCCACTTCCGGAGACCTCACACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR GCA 90 bp CGGCTGGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGCAAGGCAGGGGAAGGTaGATCCTCGCCAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RLGRFGRRIVFLGCRHLVQGRGR*ILARLL
Trigger: CAGGAGCCTGGCGAGGATGCACCTTCCCCTGCCTTG...CACAAGATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
3UTR CAA 72 bp CCCATGGCCAGCGAGTGCCCTCCTGTGGCCTGTCACTaGGGTCTCACACTGCGCAGGGTGCTCGTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: PMASECPPVACH*GLTLRRVLVAV
Trigger: AACTGCAACGAGCACCCTGCGCAGTGTGAGACCCAAGTGACAGGCCACAGGAGGGCACTCGCTGGCCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CCA 90 bp GCTAGGCAGGTGGGGCCCAGTGAATATGGGCGCGTAGGCCAGAAATCAAAGGCACCTTCCGAGTACCCCTaGCCCGCAGCCGGTGACACG +
Preference number: 4 (lower is better)
Translates to: ARQVGPSEYGRVGQKSKAPSEYP*PAAGDT
Trigger: CGTGTCACCGGCTGCGGGCCAGGGGTACTCGGAAGG...TGCCTTTGATTTCTGGCCTACGCGCCCATATTCACTGGGCCCCACCTGCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000540583.5
CDS-3UTR CCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTGCGAGAGCCCCACGATaGCGGCGAGGGCGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSARAPR*RRGRPL
Trigger: CAACGGGCGCCCTCGCCGCCATCGTGGGGCTCTCGC...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTCCGCACTGCAGCAGCTaGCGGTCCCCGCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSPHCSS*RSPQPC
Trigger: GCAGGGCTGCGGGGACCGCCAGCTGCTGCAGTGCGG...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp TCTTCCACAATCGGCTGGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCTGCCGCCATCTTGTGTaGGGTCTCCGGAAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SSTIGWDASVGESCSSGACRHLV*GLRKWV
Trigger: GACCCACTTCCGGAGACCTCACACAAGATGGCGGCA...GGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCGATTGTGGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR GCA 90 bp CACAATCGGCTGGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATACTTGGGTCTCACACTaGGCAGGGTGCTCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: HNRLGRFGRRIVFLGCRHTWVSH*AGCSLQ
Trigger: CTGCAACGAGCACCCTGCGCAGTGTGAGACCCAAGT...ATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCGATTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR GCA 90 bp TTGTGTGAGGTCTCCGGAAGTGGGTCTGCGGCGCGCGGGATGCTGGGAAATGTAGAGCTGTATGTTGCATaGCCCATGGCCAGCGAGTGC +
Preference number: 4 (lower is better)
Translates to: LCEVSGSGSAARGMLGNVELYVA*PMASEC
Trigger: GCACTCGCTGGCCATGGGGCATGCAACATACAGCTC...TACATTTCCCAGCATCCCGCGCGCCGCAGACCCACTTCCGGAGACCTCACACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGACCTTCCGAGTACCCCTaGCCCGCAGCCGGTGACACG +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGPSEYP*PAAGDT
Trigger: CGTGTCACCGGCTGCGGGCCAGGGGTACTCGGAAGG...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326765.10
CDS-3UTR CCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGATCCAGCAGCAGTCCCTaGAAGCGCCGCAGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGSSSSP*KRRSAS
Trigger: CGACGCGCTGCGGCGCTTCCAGGGACTGCTGCTGGA...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGGCGAGAGCCCCACGATaGCGGCGAGGGCGCCCGTTG +
Preference number: 4 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLARAPR*RRGRPL
Trigger: CAACGGGCGCCCTCGCCGCCATCGTGGGGCTCTCGC...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp TCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGTGAGGTCTCCGGAAGTGCTGTGGCCTGTCACTTaGGTCTCACACTGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SENRVPRVPPSCVRSPEVLWPVT*VSHCAG
Trigger: CCCTGCGCAGTGTGAGACCCAAGTGACAGGCCACAG...CACTTCCGGAGACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR GCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGGCGTTCCTCCCGCACTaGAGCAGCTGGCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLAFLPH*SSWRSP
Trigger: CGGGGACCGCCAGCTGCTGCAGTGCGGGAGGAACGC...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp TGGATCTTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACACACCGGACGACGTGCTCTaGGCGCCCCCTGCGGGCTTG +
Preference number: 4 (lower is better)
Translates to: WILVGFVHPNWSQASHNTPDDVL*APPAGL
Trigger: CAAGCCCGCAGGGGGCGCGCAGAGCACGTCGTCCGG...TGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR GCA 90 bp TTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACACATCTGTCTCTCCCCGGACGACGTaGTCTGCGCGCCCCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LVGFVHPNWSQASHNTSVSPRTT*SARPLR
Trigger: CCGCAGGGGGCGCGCAGAGCACGTCGTCCGGGGAGA...GACAGATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR CCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACAGCTGCCGGCCACGTTaGCTACGAGGGAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNSCRPR*LRGSAC
Trigger: GCAGGCGCTCCCTCGTAGCCAACGTGGCCGGCAGCT...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGCCGCCCGCCTGGGGATaGGGAAGCCACGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLPPAWG*GSHVSQ
Trigger: TTGGCTCACGTGGCTTCCTCATCCCCAGGCGGGCGG...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACACTCCAGCTGCTCGCTaGGTTCGTCCAGAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNTPAAR*VRPEPR
Trigger: CCGGGGCTCTGGACGAACTCAGCGAGCAGCTGGAGT...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GCTTGCCGGGGATTGCACCCGTCCGCTAGGCAGGTGGGGCCCAGTGAATATGGGCCAATTTCAGTCTCATaGTCTCTGTTGGAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: ACRGLHPSARQVGPSEYGPISVS*SLLEQV
Trigger: AACCTGCTCCAACAGAGATCATGAGACTGAAATTGG...CCCATATTCACTGGGCCCCACCTGCCTAGCGGACGGGTGCAATCCCCGGCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR GCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTCAAGGCAGGGGAAGGTaGATCCTCGCCAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSQGRGR*ILARLL
Trigger: CAGGAGCCTGGCGAGGATGCACCTTCCCCTGCCTTG...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326765.10
CDS-3UTR GCA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAACTACGAGGGAGCGCCTaGGCAGGCGCTCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKLRGSA*AGAPGA
Trigger: GGCGCCTGGAGCGCCTGCGCAGGCGCTCCCTCGTAG...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCGTGGCCGCGATCTCCTaGACCCTCCGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: WVLNHPTTFREGLICSGFVAAIS*TLRSSR
Trigger: CCGGGAGCTGCGGAGGGTGCAGGAGATCGCGGCCAC...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp ATGGTGGCAGAGAAGAGGAATGTTTTCCGATCTCGAGGAATCACTTTGAGGATCCGCCCCCTGCGGGCTTaGCGGGGATTGCACCCGTCC +
Preference number: 4 (lower is better)
Translates to: MVAEKRNVFRSRGITLRIRPLRA*RGLHPS
Trigger: GGACGGGTGCAATCCCCGGCAAGCCCGCAGGGGGCG...GATCCTCAAAGTGATTCCTCGAGATCGGAAAACATTCCTCTTCTCTGCCACCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCAGCTGCCGGCCACGTTaGCTACGAGGGAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFSCRPR*LRGSAC
Trigger: GCAGGCGCTCCCTCGTAGCCAACGTGGCCGGCAGCT...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAACCGCACTGCAGCAGCTaGCGGTCCCCGCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKPHCSS*RSPQPC
Trigger: GCAGGGCTGCGGGGACCGCCAGCTGCTGCAGTGCGG...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTGCCTTCAGCACGGCCTaGCTAACCTTGGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSAFSTA*LTLVSP
Trigger: GGGGGACACCAAGGTTAGCCAGGCCGTGCTGAAGGC...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp GTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACACATCTGTCACACTGTCCCCGCGAAGCTaGAGATCGCTGACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: VGFVHPNWSQASHNTSVTLSPRS*RSLTAP
Trigger: CGGGGCGGTCAGCGATCTGCAGCTTCGCGGGGACAG...TGTGACAGATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR GCA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAAGTGGCCGCGATCTCCTaGACCCTCCGCAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKVAAIS*TLRSSR
Trigger: CCGGGAGCTGCGGAGGGTGCAGGAGATCGCGGCCAC...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCCGGTCCCCGCAGCCCTaGCAGCGGCAGAAAAACTCG +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFRSPQP*QRQKNS
Trigger: CGAGTTTTTCTGCCGCTGGCAGGGCTGCGGGGACCG...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGACATACGGTGAGACACTaGCCCAGGGTGCACGTACGC +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGHTVRH*PRVHVR
Trigger: GCGTACGTGCACCCTGGGGCAGTGTCTCACCGTATG...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTGGCCACGACTGGACTTaGTGCAGAGCTGAACCCGAG +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSGHDWT*CRAEPE
Trigger: CTCGGGTTCAGCTCTGCACCAAGTCCAGTCGTGGCC...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACCCCTTGTTCATACGGTaGGACACTGCCCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNPLFIR*DTAPGC
Trigger: GCACCCTGGGGCAGTGTCTCACCGTATGAACAAGGG...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp TCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGTGAGGTCTCCGGAAGTGAAGGTCTGTGTGAAGTaGCAGAAGAGCACACCCTAC +
Preference number: 4 (lower is better)
Translates to: SENRVPRVPPSCVRSPEVKVCVK*QKSTPY
Trigger: GTAGGGTGTGCTCTTCTGTCACTTCACACAGACCTT...CACTTCCGGAGACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR GCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGTTGCGCTCAGCGAGCTaGCGGCCACGTTGGCTACGA +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLLRSAS*RPRWLR
Trigger: TCGTAGCCAACGTGGCCGGCAGCTCGCTGAGCGCAA...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTGCGTTCCTCCCGCACTaGAGCAGCTGGCGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMIAFLPH*SSWRSP
Trigger: CGGGGACCGCCAGCTGCTGCAGTGCGGGAGGAACGC...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGGACACTGCCCCAGGGTaGACGTACGCGTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLDTAPG*TYACSL
Trigger: GAGAGAGCACGCGTACGTGCACCCTGGGGCAGTGTC...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGGACACTGCCCCAGGGTaGACGTACGCGTGCTCTCTC +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLDTAPG*TYACSL
Trigger: GAGAGAGCACGCGTACGTGCACCCTGGGGCAGTGTC...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGAGGTCGTGGCCACGACTaGACTTGGTGCAGAGCTGAA +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGGRGHD*TWCRAE
Trigger: TTCAGCTCTGCACCAAGTCCAGTCGTGGCCACGACC...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTCGCGCGGAACATCCGTaGACGAGTTGGGTTACATCT +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSRAEHP*TSWVTS
Trigger: AGATGTAACCCAACTCGTTCACGGATGTTCCGCGCG...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326765.10
CDS-3UTR TCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCGGAGCAGGACTTAGATaGCGGCTTCACGGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFGAGLR*RLHGLP
Trigger: GGGAAGCCCGTGAAGCCGTCATCTAAGTCCTGCTCC...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGCTGTCCCCGCGAAGCTaGAGATCGCTGACCGCCCCG +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKLSPRS*RSLTAP
Trigger: CGGGGCGGTCAGCGATCTGCAGCTTCGCGGGGACAG...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326765.10
CDS-3UTR GCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTCGTCCAGAGCCCCGGTaGAGGACTCCAGGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMIRPEPR*RTPGSR
Trigger: CCGAGAGCCTGGAGTCCTGCACCGGGGCTCTGGACG...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGACACGACTGGACTTGGTaGAGAGCTGAACCCGAGACT +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGHDWTW*RAEPET
Trigger: AGTCTCGGGTTCAGCTCTGCACCAAGTCCAGTCGTG...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGTCCAGCAGCAGTCCCTaGAAGCGCCGCAGCGCGTCG +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKSSSSP*KRRSAS
Trigger: CGACGCGCTGCGGCGCTTCCAGGGACTGCTGCTGGA...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAATCTGGTCCTGGCAGGTaGCCGCGATCTCCTGCACCC +
Preference number: 4 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKSGPGR*PRSPAP
Trigger: GGGTGCAGGAGATCGCGGCCACCTGCCAGGACCAGA...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp TTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACACATCTGTCACACCCAGCGTCCGCTAGGCAGGTaGGGCCCAGTGAATATGGGC +
Preference number: 4 (lower is better)
Translates to: FCPSQLVTSFTQHICHTQRPLGR*GPVNMG
Trigger: GCCCATATTCACTGGGCCCCACCTGCCTAGCGGACG...CTGGGTGTGACAGATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR TCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTGAAGCTGCAGATCGCTaGCCGCCCCGCGCACCCCCG +
Preference number: 4 (lower is better)
Translates to: FNGAVLLNPENAEPSESPEAADR*PPRAPP
Trigger: CGGGGGTGCGCGGGGCGGTCAGCGATCTGCAGCTTC...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326765.10
CDS-3UTR TCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTCTGGCCCGCAGCCGGTaGCACGGCGCGCGGAACATC +
Preference number: 4 (lower is better)
Translates to: FNGAVLLNPENAEPSESPLARSR*HGARNI
Trigger: GATGTTCCGCGCGCCGTGTCACCGGCTGCGGGCCAG...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326765.10
CDS-3UTR TCA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGCACGGGCTTCCCCTCTaGGTACTTGGAGGACTGGAT +
Preference number: 4 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLHGLPL*VLGGLD
Trigger: ATCCAGTCCTCCAAGTACTCAGAGGGGAAGCCCGTG...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCCACGGGCTTCCCCTCTaGGTACTTGGAGGACTGGAT +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFHGLPL*VLGGLD
Trigger: ATCCAGTCCTCCAAGTACTCAGAGGGGAAGCCCGTG...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp AATCTGGATCTTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAAGCAGGTGGGGCCCAGTaGATATGGGCGCGTAGGCAA +
Preference number: 4 (lower is better)
Translates to: NLDLGGFCPSQLVTSFTQAGGAQ*IWARRQ
Trigger: TTGCCTACGCGCCCATATTCACTGGGCCCCACCTGC...TTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR TCA 90 bp TCTTCCACAATCGGCTGGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCAAGGGCCAAAGATTaGGACATTGAATCAATTCCA +
Preference number: 4 (lower is better)
Translates to: SSTIGWDASVGESCSSGAARAKD*DIESIP
Trigger: TGGAATTGATTCAATGTCTCAATCTTTGGCCCTTGC...GGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCGATTGTGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR GCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTCTACGAGGGAGCGCCTaGGCAGGCGCTCCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: FNGAVLLNPENAEPSESPLRGSA*AGAPGA
Trigger: GGCGCCTGGAGCGCCTGCGCAGGCGCTCCCTCGTAG...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTCGGTCCCCGCAGCCCTaGCAGCGGCAGAAAAACTCG +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMIRSPQP*QRQKNS
Trigger: CGAGTTTTTCTGCCGCTGGCAGGGCTGCGGGGACCG...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAACGTCCAGAGCCCCGGTaGAGGACTCCAGGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQRPEPR*RTPGSR
Trigger: CCGAGAGCCTGGAGTCCTGCACCGGGGCTCTGGACG...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGACCCGAGACTCCAGCTaGTCGCTGAGTTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLTRDSS*SLSSSR
Trigger: TCTGGACGAACTCAGCGAGCAGCTGGAGTCTCGGGT...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTTCTGGTCCTGGCAGGTaGCCGCGATCTCCTGCACCC +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMISGPGR*PRSPAP
Trigger: GGGTGCAGGAGATCGCGGCCACCTGCCAGGACCAGA...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAAAGGATCTCTCGCATCTaGTCCTGGCAGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKRISRI*SWQVAA
Trigger: CGCGGCCACCTGCCAGGACCAGATGCGAGAGATCCT...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACAACAGCCCTGCACGCTaGTCAGCAGAGATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNNSPAR*SAEILR
Trigger: CCTCAAGATCTCTGCTGACCAGCGTGCAGGGCTGTT...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGAGAGTACTTGGAGGACTaGATTGGGAGCCACTCAGGA +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGEYLED*IGSHSG
Trigger: TCCTGAGTGGCTCCCAATCCAGTCCTCCAAGTACTC...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCCCCTCTGAGTACTTaGAGGACTGGATTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNSPLST*RTGLGA
Trigger: GGCTCCCAATCCAGTCCTCCAAGTACTCAGAGGGGA...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTATACTGCCCCATCACTaGGAAGGGTGCGGACAGATT +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSILPHH*EGCGQI
Trigger: AATCTGTCCGCACCCTTCCCAGTGATGGGGCAGTAT...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGAATACTGCCCCATCACTaGGAAGGGTGCGGACAGATT +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGILPHH*EGCGQI
Trigger: AATCTGTCCGCACCCTTCCCAGTGATGGGGCAGTAT...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp TTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACACATCTGTCACACCCAGGCGAGTGCCCTCCTGTaGCCTGTCACTTGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: FCPSQLVTSFTQHICHTQASALL*PVTWVS
Trigger: TGAGACCCAAGTGACAGGCCACAGGAGGGCACTCGC...CTGGGTGTGACAGATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CCA 90 bp ATCTGGATCTTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACATGTTGCATGCCCCATaGCCAGCGAGTGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: IWILVGFVHPNWSQASHNMLHAP*PASALL
Trigger: CAGGAGGGCACTCGCTGGCCATGGGGCATGCAACAT...GTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR TCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAACTCCAGCTGCTCGCTaGGTTCGTCCAGAGCCCCGG +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQTPAAR*VRPEPR
Trigger: CCGGGGCTCTGGACGAACTCAGCGAGCAGCTGGAGT...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTGTCCTCTCTGGGTTCTaGACCATCCTACAACGTTCA +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSVLSGF*TILQRS
Trigger: TGAACGTTGTAGGATGGTTCAGAACCCAGAGAGGAC...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACGGCAGAAGAATTGCTTaGACCCAGGAGTCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNGRRIA*TQESEV
Trigger: AACCTCCGACTCCTGGGTTCAAGCAATTCTTCTGCC...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGATCAGAAAAACAGCCCTaGACGCTGGTCAGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGSEKQP*TLVSRD
Trigger: ATCTCTGCTGACCAGCGTGCAGGGCTGTTTTTCTGA...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTCATCACTGGGAAGGGTaGGGACAGATTGGGTACATT +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSHHWEG*GQIGYI
Trigger: AATGTACCCAATCTGTCCGCACCCTTCCCAGTGATG...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGAGGATCTCTCGCATCTaGTCCTGGCAGGTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKRISRI*SWQVAA
Trigger: CGCGGCCACCTGCCAGGACCAGATGCGAGAGATCCT...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGAATTGTACAGGGCGATaGAGGCGTTCCTCCCGCACT +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLNCTGR*RRSSRT
Trigger: AGTGCGGGAGGAACGCCTCCATCGCCCTGTACAATT...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTGCCTTCAGCACGGCCTaGCTAACCTTGGTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMIAFSTA*LTLVSP
Trigger: GGGGGACACCAAGGTTAGCCAGGCCGTGCTGAAGGC...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTATGAGGATGATTTGCTaGCCTCGGTCATTAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSMRMIC*PRSLGG
Trigger: TCCCCCTAATGACCGAGGCCAGCAAATCATCCTCAT...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTGGAAAAGAAGGGCTTTaGGGACCTGCCCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSGKEGL*GPAHFK
Trigger: TTTGAAGTGGGCAGGTCCCCAAAGCCCTTCTTTTCC...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCAGAGGACCCAGAGGATaGCACTCTCTCCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFRGPRG*HSLQSQ
Trigger: CTGAGACTGGAGAGAGTGCCATCCTCTGGGTCCTCT...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCTCCCCTCTGAGTACTTaGAGGACTGGATTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFSPLST*RTGLGA
Trigger: GGCTCCCAATCCAGTCCTCCAAGTACTCAGAGGGGA...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTCCGCCCGCCTGGGGATaGGGAAGCCACGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: FNGAVLLNPENAEPSESPPPAWG*GSHVSQ
Trigger: TTGGCTCACGTGGCTTCCTCATCCCCAGGCGGGCGG...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTGGTCAGCAGAGATCTTaGGGTCGTGGCCACGACTGG +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMIGQQRS*GRGHDW
Trigger: CCAGTCGTGGCCACGACCTCAAGATCTCTGCTGACC...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTAATGATGTCGGGAAATaGAGTTGGCAGTCGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSNDVGK*SWQSLH
Trigger: ATGGAGCGACTGCCAACTTCATTTCCCGACATCATT...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTCCCTTGTTCATACGGTaGGACACTGCCCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMIPLFIR*DTAPGC
Trigger: GCACCCTGGGGCAGTGTCTCACCGTATGAACAAGGG...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTATGCTAGCATCTGGGTaGAACAGTCTAGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSMLASG*NSLGDD
Trigger: GTCATCTCCTAGACTGTTTCACCCAGATGCTAGCAT...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGCCCATGAGGATGATTTaGTGGCCTCGGTCATTAGGG +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLPMRMI*WPRSLG
Trigger: CCCTAATGACCGAGGCCAGCAAATCATCCTCATGGG...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTGTTTTTCTCATCCTTTaGCTTCGGCTCCTAACCCAG +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSVFLIL*LRLLTQ
Trigger: CTGGGTTAGGAGCCGAAGGCAAAGGATGAGAAAAAC...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTAGGGCTTTGGGGACCTaGCCACTTCAAAAACAGTTT +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSRALGT*PLQKQF
Trigger: AAACTGTTTTTGAAGTGGGCAGGTCCCCAAAGCCCT...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGTGTTTAAACTCAGGTTaGTGGGCCCCACAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLCLNSG*WAPQPE
Trigger: CTCTGGCTGTGGGGCCCAGCAACCTGAGTTTAAACA...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGCATACGGTGAGACACTaGCCCAGGGTGCACGTACGC +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKHTVRH*PRVHVR
Trigger: GCGTACGTGCACCCTGGGGCAGTGTCTCACCGTATG...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACATTGGAAATGACAGGTaGCCGAGGGCAAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNIGNDR*PRASAS
Trigger: TGATGCACTTGCCCTCGGGCACCTGTCATTTCCAAT...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGGGCCACGACTGGACTTaGTGCAGAGCTGAACCCGAG +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKGHDWT*CRAEPE
Trigger: CTCGGGTTCAGCTCTGCACCAAGTCCAGTCGTGGCC...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCCTTGGAGGACTGGATTaGGAGCCACTCAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: WVLNHPTTFREGLICSGFLGGLD*EPLRKG
Trigger: GCCTTTCCTGAGTGGCTCCCAATCCAGTCCTCCAAG...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTTCTCATTTTGGCTTCTaGGACACAGTCTGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSSHFGF*DTVCPW
Trigger: CCAAGGACAGACTGTGTCCCAGAAGCCAAAATGAGA...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGACTCTCTCTCTCATTTTaGCTTCTGGGACACAGTCTG +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGLSLSF*LLGHSL
Trigger: CAGACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAG...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGTTTGGGAAGCCAAGGTaGGCGGATCACATAAGGCCA +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLFGKPR*ADHIRP
Trigger: TGGCCTTATGTGATCCGCCCACCTTGGCTTCCCAAA...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGGATGAGGAAGCCACGTaGGCCAAAGAAGACGATGAA +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLDEEAT*AKEDDE
Trigger: TTCATCGTCTTCTTTGGCTCACGTGGCTTCCTCATC...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAGGTCAGCAGAGATCTTaGGGTCGTGGCCACGACTGG +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQGQQRS*GRGHDW
Trigger: CCAGTCGTGGCCACGACCTCAAGATCTCTGCTGACC...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGCGTTCAGAGAAGGGCTaGTTTGCTCTGGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLRSEKG*FALDSG
Trigger: TCCAGAATCCAGAGCAAATCAGCCCTTCTCTGAACG...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGGTCCTCTCTGGGTTCTaGACCATCCTACAACGTTCA +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLVLSGF*TILQRS
Trigger: TGAACGTTGTAGGATGGTTCAGAACCCAGAGAGGAC...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp AGTAAACTCCAACCCAGAATGGGGAAGAATACTGAATTAGCTGAGCACATTCTGTGCCGCCATCTTGTGTaGGGTCTCCGGAAGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SKLQPRMGKNTELAEHILCRHLV*GLRKWV
Trigger: GACCCACTTCCGGAGACCTCACACAAGATGGCGGCA...CAGAATGTGCTCAGCTAATTCAGTATTCTTCCCCATTCTGGGTTGGAGTTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR TCA 90 bp AATCTGGATCTTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAAGGAGGGGGATGGCAGTaGAGCCAAGATTTCGCAGTA +
Preference number: 4 (lower is better)
Translates to: NLDLGGFCPSQLVTSFTQGGGWQ*SQDFAV
Trigger: TACTGCGAAATCTTGGCTTCACTGCCATCCCCCTCC...TTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR TCA 90 bp TTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACACATCTGTCCCTAGGCGCTTACTCTaGCTCATTTGTCCATGGAGG +
Preference number: 4 (lower is better)
Translates to: LVGFVHPNWSQASHNTSVPRRLL*LICPWR
Trigger: CCTCCATGGACAAATGAGTCAGAGTAAGCGCCTAGG...GACAGATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR GCA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAACACGACTGGACTTGGTaGAGAGCTGAACCCGAGACT +
Preference number: 4 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKHDWTW*RAEPET
Trigger: AGTCTCGGGTTCAGCTCTGCACCAAGTCCAGTCGTG...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCTCAGAAAAACAGCCCTaGACGCTGGTCAGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFSEKQP*TLVSRD
Trigger: ATCTCTGCTGACCAGCGTGCAGGGCTGTTTTTCTGA...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTAGAGAAGGGCTGATTTaGTCTGGATTCTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSREGLI*SGFWSS
Trigger: AGAACTCCAGAATCCAGAGCAAATCAGCCCTTCTCT...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCTGTTTAAACTCAGGTTaGTGGGCCCCACAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: WVLNHPTTFREGLICSGFCLNSG*WAPQPE
Trigger: CTCTGGCTGTGGGGCCCAGCAACCTGAGTTTAAACA...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCCTCAGCTCCTGGTCTTaGCATTCAAGACTCTCCACA +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFLSSWS*HSRLST
Trigger: TGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAG...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGGGAAAAGAAGGGCTTTaGGGACCTGCCCACTTCAAA +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLGKEGL*GPAHFK
Trigger: TTTGAAGTGGGCAGGTCCCCAAAGCCCTTCTTTTCC...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCCACCAGGGTCCTCTCTaGGTTCTGAACCATCCTACA +
Preference number: 4 (lower is better)
Translates to: WVLNHPTTFREGLICSGFHQGPL*VLNHPT
Trigger: TGTAGGATGGTTCAGAACCCAGAGAGGACCCTGGTG...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CAA 72 bp GGTGCTCGTTGCAGTTTTATTCCTGAGGATGGGAAGTaGGGGGCAATCTGGTGTCCGTCACCAGAAATCAAA +
Preference number: 4 (lower is better)
Translates to: GARCSFIPEDGK*GAIWCPSPEIK
Trigger: TTTGATTTCTGGTGACGGACACCAGATTGCCCCCAACTTCCCATCCTCAGGAATAAAACTGCAACGAGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR TCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCCGTTCAGAGAAGGGCTaGTTTGCTCTGGATTCTGGA +
Preference number: 4 (lower is better)
Translates to: WVLNHPTTFREGLICSGFRSEKG*FALDSG
Trigger: TCCAGAATCCAGAGCAAATCAGCCCTTCTCTGAACG...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCTCCCTAGAGAAGCCGTaGGACTTCGTGAAAGCTCAT +
Preference number: 4 (lower is better)
Translates to: WVLNHPTTFREGLICSGFSLEKP*DFVKAH
Trigger: ATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGA...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGACTTTTCCAGGTCAAGTaGTACCTTCTGGCAAAATAC +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGLFQVK*YLLAKY
Trigger: GTATTTTGCCAGAAGGTATCACTTGACCTGGAAAAG...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCATGCTAGCATCTGGGTaGAACAGTCTAGGAGATGAC +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFMLASG*NSLGDD
Trigger: GTCATCTCCTAGACTGTTTCACCCAGATGCTAGCAT...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTACAGAACAATTCAAATaGTTGCAAGCCCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSTEQFK*LQAPEP
Trigger: AGGTTCTGGGGCTTGCAATCATTTGAATTGTTCTGT...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACATACACCACGTTGGCTaGTTGCTTGACATGTCTGAT +
Preference number: 4 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNIHHVG*LLDMSD
Trigger: ATCAGACATGTCAAGCAATCAGCCAACGTGGTGTAT...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTTTGCGCTCAGCGAGCTaGCGGCCACGTTGGCTACGA +
Preference number: 4 (lower is better)
Translates to: FNGAVLLNPENAEPSESPLRSAS*RPRWLR
Trigger: TCGTAGCCAACGTGGCCGGCAGCTCGCTGAGCGCAA...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAACCCGAGACTCCAGCTaGTCGCTGAGTTCGTCCAGA +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQTRDSS*SLSSSR
Trigger: TCTGGACGAACTCAGCGAGCAGCTGGAGTCTCGGGT...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCAGGGCTTTGGGGACCTaGCCACTTCAAAAACAGTTT +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFRALGT*PLQKQF
Trigger: AAACTGTTTTTGAAGTGGGCAGGTCCCCAAAGCCCT...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGATGGGTGATGTTAATTTaGCATTCCAGGGACTACACT +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGWVMLI*HSRDYT
Trigger: AGTGTAGTCCCTGGAATGGCAAATTAACATCACCCA...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGACTTAATCTCATCTCTTaGAAAGAGCCTCAGCAGTCT +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGLNLIS*KEPQQS
Trigger: AGACTGCTGAGGCTCTTTGCAAGAGATGAGATTAAG...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCCTCAGCTCCTGGTCTTaGCATTCAAGACTCTCCACA +
Preference number: 4 (lower is better)
Translates to: WVLNHPTTFREGLICSGFLSSWS*HSRLST
Trigger: TGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAG...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTAATTGTACAGGGCGATaGAGGCGTTCCTCCCGCACT +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMINCTGR*RRSSRT
Trigger: AGTGCGGGAGGAACGCCTCCATCGCCCTGTACAATT...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGCCAGTTTCTGAATCTTaGCCTTCAGCACGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKPVSES*PSARPG
Trigger: GCCAGGCCGTGCTGAAGGCCAAGATTCAGAAACTGG...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGAACAGCCCTGCACGCTaGTCAGCAGAGATCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKNSPAR*SAEILR
Trigger: CCTCAAGATCTCTGCTGACCAGCGTGCAGGGCTGTT...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCATGAGGATGATTTGCTaGCCTCGGTCATTAGGGGGA +
Preference number: 4 (lower is better)
Translates to: WVLNHPTTFREGLICSGFMRMIC*PRSLGG
Trigger: TCCCCCTAATGACCGAGGCCAGCAAATCATCCTCAT...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCGCTCCTAACCCAGCTTaGTGTTTTCCTAAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: WVLNHPTTFREGLICSGFAPNPA*CFPKGA
Trigger: AGCTCCCTTAGGAAAACACCAAGCTGGGTTAGGAGC...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTAGGGCTGATTTGCTCTaGATTCTGGAGTTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSRADLL*ILEFFV
Trigger: TACAAAGAACTCCAGAATCCAGAGCAAATCAGCCCT...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGCTTGGAGGACTGGATTaGGAGCCACTCAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKLGGLD*EPLRKG
Trigger: GCCTTTCCTGAGTGGCTCCCAATCCAGTCCTCCAAG...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCCTCTCTCTCTCATTTTaGCTTCTGGGACACAGTCTG +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFLSLSF*LLGHSL
Trigger: CAGACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAG...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACCTTAAACTCAGCTCCTaGTCTTGCCATTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNLKLSS*SCHSRL
Trigger: GAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAATTTGGGAAGCCAAGGTaGGCGGATCACATAAGGCCA +
Preference number: 4 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKFGKPR*ADHIRP
Trigger: TGGCCTTATGTGATCCGCCCACCTTGGCTTCCCAAA...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAAGATGAGGAAGCCACGTaGGCCAAAGAAGACGATGAA +
Preference number: 4 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKDEEAT*AKEDDE
Trigger: TTCATCGTCTTCTTTGGCTCACGTGGCTTCCTCATC...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCCTCACGCACATTTTaGGGACTTCAAAGACTAGTA +
Preference number: 4 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNSSRTF*GLQRLV
Trigger: TACTAGTCTTTGAAGTCCTCAAAATGTGCGTGAGGA...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCAATGATGTCGGGAAATaGAGTTGGCAGTCGCTCCAT +
Preference number: 4 (lower is better)
Translates to: WVLNHPTTFREGLICSGFNDVGK*SWQSLH
Trigger: ATGGAGCGACTGCCAACTTCATTTCCCGACATCATT...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAAAGCCGTGAGACTTCGTaGAAGCTCATCAAGGGGATT +
Preference number: 4 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKSRETS*KLIKGI
Trigger: AATCCCCTTGATGAGCTTTCACGAAGTCTCACGGCT...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGAAAACAGTCTAGGAGATaGCACCAGCTTGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGKQSRR*HQLEKK
Trigger: TTTCTTTTCAAGCTGGTGTCATCTCCTAGACTGTTT...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp ATGGTGGCAGAGAAGAGGAATGTTTTCCGATCTCGAGGAATCACTTTGAGGATCGGCAAAAGGTCTGTGTaGAGTGACAGAAGAGCACAC +
Preference number: 4 (lower is better)
Translates to: MVAEKRNVFRSRGITLRIGKRSV*SDRRAH
Trigger: GTGTGCTCTTCTGTCACTTCACACAGACCTTTTGCC...GATCCTCAAAGTGATTCCTCGAGATCGGAAAACATTCCTCTTCTCTGCCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR GCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCCAGAGGCACCGTTTTTaGATGTATGGTCCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: WVLNHPTTFREGLICSGFQRHRF*MYGPKD
Trigger: GTCTTTGGGACCATACATGCAAAAACGGTGCCTCTG...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTCTTCCTCAGACATACTaGCCCATCACTGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMILPQTY*PITGKG
Trigger: ACCCTTCCCAGTGATGGGGCAGTATGTCTGAGGAAG...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGAATCCCCATTTATCTCTaGACGATGTCTTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGIPIYL*TMSLSQ
Trigger: CTGAGATAAAGACATCGTGCAGAGATAAATGGGGAT...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAAGAGGACCCAGAGGATaGCACTCTCTCCAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQRGPRG*HSLQSQ
Trigger: CTGAGACTGGAGAGAGTGCCATCCTCTGGGTCCTCT...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGGAGTACTTGGAGGACTaGATTGGGAGCCACTCAGGA +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKEYLED*IGSHSG
Trigger: TCCTGAGTGGCTCCCAATCCAGTCCTCCAAGTACTC...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTCCGTTTTTGCATGTATaGTCCCAAAGACTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSPFLHV*SQRLFN
Trigger: GTTGAAAAGTCTTTGGGACCATACATGCAAAAACGG...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp AGTAAACTCCAACCCAGAATGGGGAAGAATACTGAATTAGCTGAGCACATTCTGCTGAGGATGGGAAGTTaGGGGCAATCTGGTGTCCGT +
Preference number: 4 (lower is better)
Translates to: SKLQPRMGKNTELAEHILLRMGS*GQSGVR
Trigger: ACGGACACCAGATTGCCCCCAACTTCCCATCCTCAG...CAGAATGTGCTCAGCTAATTCAGTATTCTTCCCCATTCTGGGTTGGAGTTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR TCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACAGCCAAAGAAGACGATaGAGTAGACAGAATTGTACA +
Preference number: 4 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNSQRRR*SRQNCT
Trigger: TGTACAATTCTGTCTACTTCATCGTCTTCTTTGGCT...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTCCTCACGCACATTTTaGGGACTTCAAAGACTAGTA +
Preference number: 4 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLSSRTF*GLQRLV
Trigger: TACTAGTCTTTGAAGTCCTCAAAATGTGCGTGAGGA...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCGAAAAAGAATCTCCCTaGAGGAGAGAGACAATCAAG +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFEKESP*RRETIK
Trigger: CTTGATTGTCTCTCTCCTTCAGGGAGATTCTTTTTC...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAGGCAGAAGAATTGCTTaGACCCAGGAGTCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQGRRIA*TQESEV
Trigger: AACCTCCGACTCCTGGGTTCAAGCAATTCTTCTGCC...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCTGGGTGATGTTAATTTaGCATTCCAGGGACTACACT +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFWVMLI*HSRDYT
Trigger: AGTGTAGTCCCTGGAATGGCAAATTAACATCACCCA...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGATTGTGTCCAAGAATTTaGCTTTCTAACAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGLCPRI*LSNKFL
Trigger: CAGGAACTTGTTAGAAAGGCAAATTCTTGGACACAA...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGCATCACTGGGAAGGGTaGGGACAGATTGGGTACATT +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKHHWEG*GQIGYI
Trigger: AATGTACCCAATCTGTCCGCACCCTTCCCAGTGATG...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGATCAAGTGATACCTTCTaGCAAAATACCTTCAGGATA +
Preference number: 4 (lower is better)
Translates to: DHGVPREAVRLRESSSRGSSDTF*QNTFRI
Trigger: TATCCTGAAGGTATTTTGCCAGAAGGTATCACTTGA...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CAA 72 bp CCTTGTAAGGCCAAAGGAATAGCTTCAATCTGGATCTaGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCT +
Preference number: 4 (lower is better)
Translates to: PCKAKGIASIWI*VGFVHPNWSQA
Trigger: AGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCAGATTGAAGCTATTCCTTTGGCCTTACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR TCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGAGCCAAAGAAGACGATaGAGTAGACAGAATTGTACA +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLSQRRR*SRQNCT
Trigger: TGTACAATTCTGTCTACTTCATCGTCTTCTTTGGCT...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCACAGAACAATTCAAATaGTTGCAAGCCCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: WVLNHPTTFREGLICSGFTEQFK*LQAPEP
Trigger: AGGTTCTGGGGCTTGCAATCATTTGAATTGTTCTGT...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACAAATGCAGAACCCAGTaGATCTCCTTTATTGTGAAA +
Preference number: 4 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNKCRTQ*ISFIVK
Trigger: TTTCACAATAAAGGAGATTCACTGGGTTCTGCATTT...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGGTTTTTCTCATCCTTTaGCTTCGGCTCCTAACCCAG +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKVFLIL*LRLLTQ
Trigger: CTGGGTTAGGAGCCGAAGGCAAAGGATGAGAAAAAC...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCCTTGCAAGTTCTAAGTaGTTCCTTCACATACCTCTA +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFLASSK*FLHIPL
Trigger: TAGAGGTATGTGAAGGAAGCACTTAGAACTTGCAAG...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGCTTGCAAGTTCTAAGTaGTTCCTTCACATACCTCTA +
Preference number: 4 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLLASSK*FLHIPL
Trigger: TAGAGGTATGTGAAGGAAGCACTTAGAACTTGCAAG...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAATTGGAAATGACAGGTaGCCGAGGGCAAGTGCATCA +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQIGNDR*PRASAS
Trigger: TGATGCACTTGCCCTCGGGCACCTGTCATTTCCAAT...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTCCAGTTTCTGAATCTTaGCCTTCAGCACGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: FNGAVLLNPENAEPSESPPVSES*PSARPG
Trigger: GCCAGGCCGTGCTGAAGGCCAAGATTCAGAAACTGG...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGCCGTTTTTGCATGTATaGTCCCAAAGACTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLPFLHV*SQRLFN
Trigger: GTTGAAAAGTCTTTGGGACCATACATGCAAAAACGG...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCGATGGAGTTAGGGAATaGTTGTACCTTTATGCCATA +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFDGVRE*LYLYAI
Trigger: TATGGCATAAAGGTACAACCATTCCCTAACTCCATC...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAACACAGCCAGAGTTTCTaGTTCCATAAATCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQHSQSF*FHKSGG
Trigger: CCCTCCTGATTTATGGAATCAGAAACTCTGGCTGTG...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGATACACCACGTTGGCTaGTTGCTTGACATGTCTGAT +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKIHHVG*LLDMSD
Trigger: ATCAGACATGTCAAGCAATCAGCCAACGTGGTGTAT...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTCCCATGAGGATGATTTaGTGGCCTCGGTCATTAGGG +
Preference number: 4 (lower is better)
Translates to: FNGAVLLNPENAEPSESPPMRMI*WPRSLG
Trigger: CCCTAATGACCGAGGCCAGCAAATCATCCTCATGGG...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAACAGAGGCACCGTTTTTaGATGTATGGTCCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQQRHRF*MYGPKD
Trigger: GTCTTTGGGACCATACATGCAAAAACGGTGCCTCTG...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTCTTCCTCAGACATACTaGCCCATCACTGGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: FNGAVLLNPENAEPSESPLPQTY*PITGKG
Trigger: ACCCTTCCCAGTGATGGGGCAGTATGTCTGAGGAAG...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAAATGAGAGGAAAAGTTTaGTGCTGCTGTTACTGTTGC +
Preference number: 4 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKMRGKV*CCCYCC
Trigger: GCAACAGTAACAGCAGCAGCAAACTTTTCCTCTCAT...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAAAGGGCTGATTTGCTCTaGATTCTGGAGTTCTTTGTA +
Preference number: 4 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKRADLL*ILEFFV
Trigger: TACAAAGAACTCCAGAATCCAGAGCAAATCAGCCCT...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGCTTAAACTCAGCTCCTaGTCTTGCCATTCAAGACTC +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKLKLSS*SCHSRL
Trigger: GAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCTCAAGTGATACCTTCTaGCAAAATACCTTCAGGATA +
Preference number: 4 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFSSDTF*QNTFRI
Trigger: TATCCTGAAGGTATTTTGCCAGAAGGTATCACTTGA...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp CACAACACATCTGTCACACCCAGGTCTTTAAATGTTTTAGTTTCCTCCTCTTCCTTTCTGCAAGCCCAATaGTATCACGACCTTGTAAGG +
Preference number: 4 (lower is better)
Translates to: HNTSVTPRSLNVLVSSSSFLQAQ*YHDLVR
Trigger: CCTTACAAGGTCGTGATATCATTGGGCTTGCAGAAA...GGAAGAGGAGGAAACTAAAACATTTAAAGACCTGGGTGTGACAGATGTGTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR TCA 90 bp CCAATTAAGTGTTCTATGCGCTGGAAGAGTTCCACATCATACTGTGTGACAAAAACAACCACATCTACATaGGGTATGTCCAAACCTCGG +
Preference number: 4 (lower is better)
Translates to: PIKCSMRWKSSTSYCVTKTTTST*GMSKPR
Trigger: CCGAGGTTTGGACATACCTCATGTAGATGTGGTTGT...TTTTGTCACACAGTATGATGTGGAACTCTTCCAGCGCATAGAACACTTAATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR GCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAGCTATTTCCAGCTCATaGCCTGCCTTAGAAACTCAA +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQAISSS*PALETQ
Trigger: TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGC...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGAATCAAGGAAAGCAATaGTATTTCCAGCTCATGCCC +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKNQGKQ*YFQLMP
Trigger: GGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATT...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGTTATATATCCCACAATaGAAGCTTCCATTACAAGCT +
Preference number: 4 (lower is better)
Translates to: NDRCPRASASKQLGFECLLYIPQ*KLPLQA
Trigger: AGCTTGTAATGGAAGCTTGCATTGTGGGATATATAA...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGATGAGAGGAAAAGTTTaGTGCTGCTGTTACTGTTGC +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKMRGKV*CCCYCC
Trigger: GCAACAGTAACAGCAGCAGCAAACTTTTCCTCTCAT...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCAACAATTCAAATGATTaGAAGCCCCAGAACCTAACA +
Preference number: 4 (lower is better)
Translates to: WVLNHPTTFREGLICSGFNNSND*KPQNLT
Trigger: TGTTAGGTTCTGGGGCTTGCAATCATTTGAATTGTT...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTCCATTCACTTCTGTCTaGCTCCAGGAAAGTAAAATC +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMIPFTSV*LQESKI
Trigger: GATTTTACTTTCCTGGAGGCAGACAGAAGTGAATGG...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356591.5
3UTR CAA 72 bp AGAGAAGGGCTGATTTGCTCTGGATTCTGGAGTTCTTaGTATCAGAAATTCTGGAATAGAGGCAAACGCCTT +
Preference number: 4 (lower is better)
Translates to: REGLICSGFWSS*YQKFWNRGKRL
Trigger: AAGGCGTTTGCCTCTATTCCAGAATTTCTGATACAAAGAACTCCAGAATCCAGAGCAAATCAGCCCTTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTCACAGCCAGAGTTTCTaGTTCCATAAATCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: FNGAVLLNPENAEPSESPHSQSF*FHKSGG
Trigger: CCCTCCTGATTTATGGAATCAGAAACTCTGGCTGTG...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAGAAAAAGAATCTCCCTaGAGGAGAGAGACAATCAAG +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQEKESP*RRETIK
Trigger: CTTGATTGTCTCTCTCCTTCAGGGAGATTCTTTTTC...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAATTCCAGCTCATGCCCTaGCTTAGAAACTCAAACTTA +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQFQLMP*LRNSNL
Trigger: TAAGTTTGAGTTTCTAAGGCAGGGCATGAGCTGGAA...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTATCCCCATTTATCTCTaGACGATGTCTTTATCTCAG +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMIIPIYL*TMSLSQ
Trigger: CTGAGATAAAGACATCGTGCAGAGATAAATGGGGAT...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGAAAAATGCTAGCATCTaGGTGAAACAGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKKNASI*VKQSRR
Trigger: TCTCCTAGACTGTTTCACCCAGATGCTAGCATTTTT...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CAA 72 bp TCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTaGCTCTGGATTCTGGAGTTCTTTGTATCAGAAATT +
Preference number: 4 (lower is better)
Translates to: SEPSYNVQRRAD*LWILEFFVSEI
Trigger: AATTTCTGATACAAAGAACTCCAGAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CAA 72 bp GAGAAGAGGAATGTTTTCCGATCTCGAGGAATCACTTaGAGGATCTTGTCAACCTCTGTCTCAAAATCCATA +
Preference number: 4 (lower is better)
Translates to: EKRNVFRSRGIT*RILSTSVSKSI
Trigger: TATGGATTTTGAGACAGAGGTTGACAAGATCCTCAAAGTGATTCCTCGAGATCGGAAAACATTCCTCTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR TCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAAAACAGTCTAGGAGATaGCACCAGCTTGAAAAGAAA +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQKQSRR*HQLEKK
Trigger: TTTCTTTTCAAGCTGGTGTCATCTCCTAGACTGTTT...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTAAATGCAGAACCCAGTaGATCTCCTTTATTGTGAAA +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMIKCRTQ*ISFIVK
Trigger: TTTCACAATAAAGGAGATTCACTGGGTTCTGCATTT...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTAGAGAAGGGCTGATTTaGTCTGGATTCTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: FNGAVLLNPENAEPSESPREGLI*SGFWSS
Trigger: AGAACTCCAGAATCCAGAGCAAATCAGCCCTTCTCT...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGAACAATTCAAATGATTaGAAGCCCCAGAACCTAACA +
Preference number: 4 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKNNSND*KPQNLT
Trigger: TGTTAGGTTCTGGGGCTTGCAATCATTTGAATTGTT...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAAAAAATGCTAGCATCTaGGTGAAACAGTCTAGGAGA +
Preference number: 4 (lower is better)
Translates to: TIKESNAISSSCPALETQKNASI*VKQSRR
Trigger: TCTCCTAGACTGTTTCACCCAGATGCTAGCATTTTT...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR TCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTCTTTTCCAGGTCAAGTaGTACCTTCTGGCAAAATAC +
Preference number: 4 (lower is better)
Translates to: FNGAVLLNPENAEPSESPLFQVK*YLLAKY
Trigger: GTATTTTGCCAGAAGGTATCACTTGACCTGGAAAAG...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTTTATATATCCCACAATaGAAGCTTCCATTACAAGCT +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMILYIPQ*KLPLQA
Trigger: AGCTTGTAATGGAAGCTTGCATTGTGGGATATATAA...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTTTTCTAACAAGTTCCTaGGTGATGTTAATTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LGVFLRELQILEHPMRMIFLTSS*VMLICH
Trigger: ATGGCAAATTAACATCACCCAGGAACTTGTTAGAAA...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTGATGGAGTTAGGGAATaGTTGTACCTTTATGCCATA +
Preference number: 4 (lower is better)
Translates to: FNGAVLLNPENAEPSESPDGVRE*LYLYAI
Trigger: TATGGCATAAAGGTACAACCATTCCCTAACTCCATC...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR GCA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTTTGTGTCCAAGAATTTaGCTTTCTAACAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: FNGAVLLNPENAEPSESPLCPRI*LSNKFL
Trigger: CAGGAACTTGTTAGAAAGGCAAATTCTTGGACACAA...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
3UTR CAA 72 bp TTTAATATCTCACAACAGGGTGAGATTTTATCATCTTaGTTTTACACAGTCTCAGAGAGATTAGGTGGCTAC +
Preference number: 4 (lower is better)
Translates to: FNISQQGEILSS*FYTVSERLGGY
Trigger: GTAGCCACCTAATCTCTCTGAGACTGTGTAAAACAAAGATGATAAAATCTCACCCTGTTGTGAGATATTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS GCA 90 bp AGAGCCCCACGATGGCGGCGAGGGCGCCCGTTGCGCTCAGCGAGCTaGCGGCCACGTTGGCTACGAGGGAGCGCCTGCGCAGGCGCTCCA +
Preference number: 5 (lower is better)
Translates to: RAPRWRRGRPLRSAS*RPRWLRGSACAGAP
Trigger: TGGAGCGCCTGCGCAGGCGCTCCCTCGTAGCCAACGTGGCCGGCAGCTCGCTGAGCGCAACGGGCGCCCTCGCCGCCATCGTGGGGCTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS GCA 90 bp GACCGGGCTGAGCGAGAGCCCCACGATGGCGGCGAGGGCGCCCGTTaGGCTCAGCGAGCTGCCGGCCACGTTGGCTACGAGGGAGCGCCT +
Preference number: 5 (lower is better)
Translates to: DRAEREPHDGGEGAR*AQRAAGHVGYEGAP
Trigger: AGGCGCTCCCTCGTAGCCAACGTGGCCGGCAGCTCGCTGAGCGCAACGGGCGCCCTCGCCGCCATCGTGGGGCTCTCGCTCAGCCCGGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS GCA 90 bp CGGTCCAGCAGCAGTCCCTGGAAGCGCCGCAGCGCGTCGGGCCCATaGGGCTCCCGGGCCGCCGGCCTCTCCATTCCCTTTCCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: RSSSSPWKRRSASGP*GSRAAGLSIPFPRQ
Trigger: CTGCCTTGGAAAGGGAATGGAGAGGCCGGCGGCCCGGGAGCCGCATGGGCCCGACGCGCTGCGGCGCTTCCAGGGACTGCTGCTGGACCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000326765.10
CDS GCA 90 bp CGGTCCAGCAGCAGTCCCTGGAAGCGCCGCAGCGCGTCGGGCCCATaGGGCTCCCGGGCCGCCGGCCTCTCCATTCCCATTCACTTCTGT +
Preference number: 5 (lower is better)
Translates to: RSSSSPWKRRSASGP*GSRAAGLSIPIHFC
Trigger: ACAGAAGTGAATGGGAATGGAGAGGCCGGCGGCCCGGGAGCCGCATGGGCCCGACGCGCTGCGGCGCTTCCAGGGACTGCTGCTGGACCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356591.5
CDS CCA 90 bp AGGTGCATCCTCGCCAGGCTCCTGCCCGCGCCTTCCGAGTACCCCTaGCCCGCAGCCGGTGACACGGCGCGCGGAACATCCGTGAACGAG +
Preference number: 5 (lower is better)
Translates to: RCILARLLPAPSEYP*PAAGDTARGTSVNE
Trigger: CTCGTTCACGGATGTTCCGCGCGCCGTGTCACCGGCTGCGGGCCAGGGGTACTCGGAAGGCGCGGGCAGGAGCCTGGCGAGGATGCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326765.10
ENST00000534843.1
ENST00000540583.5
CDS TCA 90 bp CAGGCTCCTGCCCGCGCCTTCCGAGTACCCCTGGCCCGCAGCCGGTaGCACGGCGCGCGGAACATCCGTGAACGAGTTGGGTTACATCTC +
Preference number: 5 (lower is better)
Translates to: QAPARAFRVPLARSR*HGARNIRERVGLHL
Trigger: GAGATGTAACCCAACTCGTTCACGGATGTTCCGCGCGCCGTGTCACCGGCTGCGGGCCAGGGGTACTCGGAAGGCGCGGGCAGGAGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326765.10
ENST00000534843.1
ENST00000540583.5
CDS GCA 90 bp GAGGCGTTCCTCCCGCACTGCAGCAGCTGGCGGTCCCCGCAGCCCTaGCAGCGGCAGAAAAACTCGAGGCAGCTCAGGATCTCTCGCATC +
Preference number: 5 (lower is better)
Translates to: EAFLPHCSSWRSPQP*QRQKNSRQLRISRI
Trigger: GATGCGAGAGATCCTGAGCTGCCTCGAGTTTTTCTGCCGCTGGCAGGGCTGCGGGGACCGCCAGCTGCTGCAGTGCGGGAGGAACGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CCA 90 bp CGGCAGAAAAACTCGAGGCAGCTCAGGATCTCTCGCATCTGGTCCTaGCAGGTGGCCGCGATCTCCTGCACCCTCCGCAGCTCCCGGGAG +
Preference number: 5 (lower is better)
Translates to: RQKNSRQLRISRIWS*QVAAISCTLRSSRE
Trigger: CTCCCGGGAGCTGCGGAGGGTGCAGGAGATCGCGGCCACCTGCCAGGACCAGATGCGAGAGATCCTGAGCTGCCTCGAGTTTTTCTGCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CCA 90 bp GAATTGTACAGGGCGATGGAGGCGTTCCTCCCGCACTGCAGCAGCTaGCGGTCCCCGCAGCCCTGCCAGCGGCAGAAAAACTCGAGGCAG +
Preference number: 5 (lower is better)
Translates to: ELYRAMEAFLPHCSS*RSPQPCQRQKNSRQ
Trigger: CTGCCTCGAGTTTTTCTGCCGCTGGCAGGGCTGCGGGGACCGCCAGCTGCTGCAGTGCGGGAGGAACGCCTCCATCGCCCTGTACAATTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp TCCTCGGGTGCCGCCATCTTGTGTGAGGTCTCCGGAAGTGGGTCTGCGGCGCGCTCGGGTGCCGCCATCTaGTGTGAGGTCTCCGGAAGT +
Preference number: 5 (lower is better)
Translates to: SSGAAILCEVSGSGSAARSGAAI*CEVSGS
Trigger: ACTTCCGGAGACCTCACACAAGATGGCGGCACCCGA...GCGCGCCGCAGACCCACTTCCGGAGACCTCACACAAGATGGCGGCACCCGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS TCA 90 bp AGTACCCCTGGCCCGCAGCCGGTGACACGGCGCGCGGAACATCCGTaGACGAGTTGGGTTACATCTCTGTCCCCGCGAAGCTGCAGATCG +
Preference number: 5 (lower is better)
Translates to: STPGPQPVTRRAEHP*TSWVTSLSPRSCRS
Trigger: CGATCTGCAGCTTCGCGGGGACAGAGATGTAACCCAACTCGTTCACGGATGTTCCGCGCGCCGTGTCACCGGCTGCGGGCCAGGGGTACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326765.10
ENST00000534843.1
ENST00000540583.5
CDS TCA 90 bp GACTGGACTTGGTGCAGAGCTGAACCCGAGACTCCAGCTGCTCGCTaGGTTCGTCCAGAGCCCCGGTGCAGGACTCCAGGCTCTCGGCCA +
Preference number: 5 (lower is better)
Translates to: DWTWCRAEPETPAAR*VRPEPRCRTPGSRP
Trigger: TGGCCGAGAGCCTGGAGTCCTGCACCGGGGCTCTGGACGAACTCAGCGAGCAGCTGGAGTCTCGGGTTCAGCTCTGCACCAAGTCCAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CCA 90 bp TGCCAGCGGCAGAAAAACTCGAGGCAGCTCAGGATCTCTCGCATCTaGTCCTGGCAGGTGGCCGCGATCTCCTGCACCCTCCGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CQRQKNSRQLRISRI*SWQVAAISCTLRSS
Trigger: GGAGCTGCGGAGGGTGCAGGAGATCGCGGCCACCTGCCAGGACCAGATGCGAGAGATCCTGAGCTGCCTCGAGTTTTTCTGCCGCTGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp GGATTGCACCCGTCCGCTAGGCAGGTGGGGCCCAGTGAATATGGGCGCGTAGGCCCTGAGGATGGGAAGTaGGGGGCAATCTGGTGTCCG +
Preference number: 5 (lower is better)
Translates to: GLHPSARQVGPSEYGRVGPEDGK*GAIWCP
Trigger: CGGACACCAGATTGCCCCCAACTTCCCATCCTCAGG...GCCTACGCGCCCATATTCACTGGGCCCCACCTGCCTAGCGGACGGGTGCAATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS CCA 90 bp AAAACTCGAGGCAGCTCAGGATCTCTCGCATCTGGTCCTGGCAGGTaGCCGCGATCTCCTGCACCCTCCGCAGCTCCCGGGAGTTGCAGA +
Preference number: 5 (lower is better)
Translates to: KTRGSSGSLASGPGR*PRSPAPSAAPGSCR
Trigger: TCTGCAACTCCCGGGAGCTGCGGAGGGTGCAGGAGATCGCGGCCACCTGCCAGGACCAGATGCGAGAGATCCTGAGCTGCCTCGAGTTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTGAGCTGCCGGCCACGTaGGCTACGAGGGAGCGCCTG +
Preference number: 5 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSELPAT*ATRERL
Trigger: CAGGCGCTCCCTCGTAGCCAACGTGGCCGGCAGCTC...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp TCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGTGAGGTCTCCGGAAGTGCCTGTGGCCTGTCACTaGGGTCTCACACTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SENRVPRVPPSCVRSPEVPVACH*GLTLRR
Trigger: CCTGCGCAGTGTGAGACCCAAGTGACAGGCCACAGG...CACTTCCGGAGACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CAA 90 bp CCACAATCGGCTGGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCAATTCAGAGCTGTATGTaGCATGCCCCATGGCCAGCG +
Preference number: 5 (lower is better)
Translates to: PQSAGTLRSENRVPRVPPIQSCM*HAPWPA
Trigger: CGCTGGCCATGGGGCATGCAACATACAGCTCTGAAT...TGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCGATTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CAA 90 bp GGATCTTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACACATGCGCCCCCTGCGGGCTaGCCGGGGATTGCACCCGTC +
Preference number: 5 (lower is better)
Translates to: GSWWVLSIPTGHKLHTTHAPPAG*PGIAPV
Trigger: GACGGGTGCAATCCCCGGCAAGCCCGCAGGGGGCGC...ATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR CAA 90 bp CCACAATCGGCTGGGACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCAGGATCTTGGTGGGTTTaGTCCATCCCAACTGGTCAC +
Preference number: 5 (lower is better)
Translates to: PQSAGTLRSENRVPRVPPGSWWV*SIPTGH
Trigger: GTGACCAGTTGGGATGGACAAAACCCACCAAGATCC...TGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTCCCAGCCGATTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR CAA 90 bp ATCTTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACACATCTGCGCCCCCTGCGGGCTaGCCGGGGATTGCACCCGTC +
Preference number: 5 (lower is better)
Translates to: ILVGFVHPNWSQASHNTSAPPAG*PGIAPV
Trigger: GACGGGTGCAATCCCCGGCAAGCCCGCAGGGGGCGC...AGATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR CAA 90 bp GACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGTGAGGTCGGCTGGCAACGTCAGTaGCTAGAAGAATGGAACGGG +
Preference number: 5 (lower is better)
Translates to: DASVGESCSSGAAILCEVGWQRQ*LEEWNG
Trigger: CCCGTTCCATTCTTCTAGCAACTGACGTTGCCAGCC...GACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CAA 90 bp CGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGTGAGGTCTCCGGAAACATCCGTGAACGAGTaGGGTTACATCTCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: RSENRVPRVPPSCVRSPETSVNE*GYISVP
Trigger: GGGGACAGAGATGTAACCCAACTCGTTCACGGATGT...TTCCGGAGACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR CAA 90 bp ATCTGGATCTTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACCGGGCTTGCCGGGGATaGCACCCGTCCGCTAGGCAG +
Preference number: 5 (lower is better)
Translates to: IWILVGFVHPNWSQASHNRACRG*HPSARQ
Trigger: CTGCCTAGCGGACGGGTGCAATCCCCGGCAAGCCCG...GTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAAGATCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS TCA 90 bp AACCTTGGTGTCCCCCTCCGCCCGCCTGGGGATGAGGAAGCCACGTaGGCCAAAGAAGACGATGAAGTAGACAGAATTGTACAGGGCGAT +
Preference number: 5 (lower is better)
Translates to: NLGVPLRPPGDEEAT*AKEDDEVDRIVQGD
Trigger: ATCGCCCTGTACAATTCTGTCTACTTCATCGTCTTCTTTGGCTCACGTGGCTTCCTCATCCCCAGGCGGGCGGAGGGGGACACCAAGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS TCA 90 bp GATGTTCTCAGAAAAACAGCCCTGCACGCTGGTCAGCAGAGATCTTaGGGTCGTGGCCACGACTGGACTTGGTGCAGAGCTGAACCCGAG +
Preference number: 5 (lower is better)
Translates to: DVLRKTALHAGQQRS*GRGHDWTWCRAEPE
Trigger: CTCGGGTTCAGCTCTGCACCAAGTCCAGTCGTGGCCACGACCTCAAGATCTCTGCTGACCAGCGTGCAGGGCTGTTTTTCTGAGAACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp TCCTCGGGTGCCGCCATCTTGTGTGAGGTCTCCGGAAGTGGGTCTGCGGCGCGCTCAGTCGACCAGGAGTaGCTATTATTATATGTGGTT +
Preference number: 5 (lower is better)
Translates to: SSGAAILCEVSGSGSAARSVDQE*LLLYVV
Trigger: AACCACATATAATAATAGCAACTCCTGGTCGACTGA...GCGCGCCGCAGACCCACTTCCGGAGACCTCACACAAGATGGCGGCACCCGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS CCA 90 bp GTCATTAGGGGGAAAGGATGTTCTCAGAAAAACAGCCCTGCACGCTaGTCAGCAGAGATCTTGAGGTCGTGGCCACGACTGGACTTGGTG +
Preference number: 5 (lower is better)
Translates to: VIRGKGCSQKNSPAR*SAEILRSWPRLDLV
Trigger: CACCAAGTCCAGTCGTGGCCACGACCTCAAGATCTCTGCTGACCAGCGTGCAGGGCTGTTTTTCTGAGAACATCCTTTCCCCCTAATGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAGAGCTGCCGGCCACGTaGGCTACGAGGGAGCGCCTG +
Preference number: 5 (lower is better)
Translates to: TIKESNAISSSCPALETQELPAT*ATRERL
Trigger: CAGGCGCTCCCTCGTAGCCAACGTGGCCGGCAGCTC...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGAACTTGGAGGACTGGATaGGGAGCCACTCAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: DHGVPREAVRLRESSSRGTWRTG*GATQER
Trigger: CCTTTCCTGAGTGGCTCCCAATCCAGTCCTCCAAGT...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp CACAACACATCTGTCACACCCAGGTCTTTAAATGTTTTAGTTTCCTCCTCTTCCCGGGCTTGCCGGGGATaGCACCCGTCCGCTAGGCAG +
Preference number: 5 (lower is better)
Translates to: HNTSVTPRSLNVLVSSSSRACRG*HPSARQ
Trigger: CTGCCTAGCGGACGGGTGCAATCCCCGGCAAGCCCG...GGAAGAGGAGGAAACTAAAACATTTAAAGACCTGGGTGTGACAGATGTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534843.1
ENST00000540583.5
CDS-3UTR CAA 90 bp GACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGTGAGGTCTCTCGAGGAATCACTTaGAGGATCTTGTCAACCTCT +
Preference number: 5 (lower is better)
Translates to: DASVGESCSSGAAILCEVSRGIT*RILSTS
Trigger: AGAGGTTGACAAGATCCTCAAAGTGATTCCTCGAGA...GACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CAA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGTGGTCAGCAGAGATCTaGAGGTCGTGGCCACGACTG +
Preference number: 5 (lower is better)
Translates to: NDRCPRASASKQLGFECLWSAEI*RSWPRL
Trigger: CAGTCGTGGCCACGACCTCAAGATCTCTGCTGACCA...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp GACCATGGAGTCCCTAGAGAAGCCGTGAGACTTCGTGAAAGCTCATCAAGGGGAGGACACAGTCTGTCCTaGGTCATCTGTGAACGACTC +
Preference number: 5 (lower is better)
Translates to: DHGVPREAVRLRESSSRGGHSLS*VICERL
Trigger: GAGTCGTTCACAGATGACCAAGGACAGACTGTGTCC...TCCCCTTGATGAGCTTTCACGAAGTCTCACGGCTTCTCTAGGGACTCCATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCCCATGAGGATGATTaGCTGGCCTCGGTCATTAGG +
Preference number: 5 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNSHEDD*LASVIR
Trigger: CCTAATGACCGAGGCCAGCAAATCATCCTCATGGGA...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTCAGAGAAGGGCTGATTaGCTCTGGATTCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSQRRAD*LWILEF
Trigger: GAACTCCAGAATCCAGAGCAAATCAGCCCTTCTCTG...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp GACGCTTCGGTCGGAGAATCGTGTTCCTCGGGTGCCGCCATCTTGTGTGAGGTCCCAAAGATTGAGACATaGAATCAATTCCACCTACAA +
Preference number: 5 (lower is better)
Translates to: DASVGESCSSGAAILCEVPKIET*NQFHLQ
Trigger: TTGTAGGTGGAATTGATTCAATGTCTCAATCTTTGG...GACCTCACACAAGATGGCGGCACCCGAGGAACACGATTCTCCGACCGAAGCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CAA 90 bp CGGTCGGCTTCATCCATGACCAAGTATTTGAGAGCTCTCAAGTTGAAACCTTTCCATTCGGGCAAACCTTaGGGCTTCAGCGACGCGTTC +
Preference number: 5 (lower is better)
Translates to: RSASSMTKYLRALKLKPFHSGKP*GFSDAF
Trigger: GAACGCGTCGCTGAAGCCCAAAGGTTTGCCCGAATG...GAAAGGTTTCAACTTGAGAGCTCTCAAATACTTGGTCATGGATGAAGCCGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CAA 90 bp GTGTCATCATTATCTCCAGCATCCTCTCGCGAGCGTTTCTTCTTTTCTCCATGCACATCCGTGAACGAGTaGGGTTACATCTCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: VSSLSPASSRERFFFSPCTSVNE*GYISVP
Trigger: GGGGACAGAGATGTAACCCAACTCGTTCACGGATGT...GCATGGAGAAAAGAAGAAACGCTCGCGAGAGGATGCTGGAGATAATGATGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CAA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCGGACACAGTCTGTCCTaGGTCATCTGTGAACGACTC +
Preference number: 5 (lower is better)
Translates to: WVLNHPTTFREGLICSGFGHSLS*VICERL
Trigger: GAGTCGTTCACAGATGACCAAGGACAGACTGTGTCC...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACCCCAGAAGACATAACTaGATAGGACATCAGGCTTGC +
Preference number: 5 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNPRRHN*IGHQAC
Trigger: GCAAGCCTGATGTCCTATCAAGTTATGTCTTCTGGG...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CCA 90 bp CTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTTGCTaGCCTCGGTCATTAGGGGGAAAGGATGTTCTCAGAAAAACAGCC +
Preference number: 5 (lower is better)
Translates to: LRELQILEHPMRMIC*PRSLGGKDVLRKTA
Trigger: GGCTGTTTTTCTGAGAACATCCTTTCCCCCTAATGACCGAGGCCAGCAAATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CCA 90 bp GGCAACAGAGTGAAACCCTGTTCACATAAAAATTACAGAGTAACCTaGGGAGGGTGGGTTGTGGGGATAACTGTGAGATTGGGAAGGCCT +
Preference number: 5 (lower is better)
Translates to: GNRVKPCSHKNYRVT*GGWVVGITVRLGRP
Trigger: AGGCCTTCCCAATCTCACAGTTATCCCCACAACCCACCCTCCCCAGGTTACTCTGTAATTTTTATGTGAACAGGGTTTCACTCTGTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588943.1
CDS-3UTR CAA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAATGGTCAGCAGAGATCTaGAGGTCGTGGCCACGACTG +
Preference number: 5 (lower is better)
Translates to: TIKESNAISSSCPALETQWSAEI*RSWPRL
Trigger: CAGTCGTGGCCACGACCTCAAGATCTCTGCTGACCA...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAATCCCATGAGGATGATTaGCTGGCCTCGGTCATTAGG +
Preference number: 5 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKSHEDD*LASVIR
Trigger: CCTAATGACCGAGGCCAGCAAATCATCCTCATGGGA...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGGGGAAAAGAAGGGCTTaGGGGACCTGCCCACTTCAA +
Preference number: 5 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKGKRRA*GTCPLQ
Trigger: TTGAAGTGGGCAGGTCCCCAAAGCCCTTCTTTTCCC...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGACTTGGAGGACTGGATaGGGAGCCACTCAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKTWRTG*GATQER
Trigger: CCTTTCCTGAGTGGCTCCCAATCCAGTCCTCCAAGT...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGTCTCTCTCTCTCATTTaGGCTTCTGGGACACAGTCT +
Preference number: 5 (lower is better)
Translates to: NDRCPRASASKQLGFECLSLSLI*ASGTQS
Trigger: AGACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGA...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTCTCTCTCTCTCATTTaGGCTTCTGGGACACAGTCT +
Preference number: 5 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLSLSLI*ASGTQS
Trigger: AGACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGA...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGCCCAGAAGACATAACTaGATAGGACATCAGGCTTGC +
Preference number: 5 (lower is better)
Translates to: NDRCPRASASKQLGFECLPRRHN*IGHQAC
Trigger: GCAAGCCTGATGTCCTATCAAGTTATGTCTTCTGGG...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCACAGAGGCACCGTTTTaGCATGTATGGTCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFTEAPF*HVWSQR
Trigger: TCTTTGGGACCATACATGCAAAAACGGTGCCTCTGT...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp GCACGTACGCGTGCTCTCTCTCTCTCTCTCTCATTTTGGCTTCTGGGACACAGTTATGAGAGGAAAAGTTaGCTGCTGCTGTTACTGTTG +
Preference number: 5 (lower is better)
Translates to: ARTRALSLSLSFWLLGHSYERKS*LLLLLL
Trigger: CAACAGTAACAGCAGCAGCAAACTTTTCCTCTCATA...ACTGTGTCCCAGAAGCCAAAATGAGAGAGAGAGAGAGAGAGCACGCGTACGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGTTGACACCTACCATATaGGAAATGACAGGTGCCCGA +
Preference number: 5 (lower is better)
Translates to: NDRCPRASASKQLGFECLLTPTI*EMTGAR
Trigger: TCGGGCACCTGTCATTTCCAATATGGTAGGTGTCAA...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCTTGACACCTACCATATaGGAAATGACAGGTGCCCGA +
Preference number: 5 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFLTPTI*EMTGAR
Trigger: TCGGGCACCTGTCATTTCCAATATGGTAGGTGTCAA...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp ATGGTGGCAGAGAAGAGGAATGTTTTCCGATCTCGAGGAATCACTTTGAGGATCGGATCTTGGTGGGTTTaGTCCATCCCAACTGGTCAC +
Preference number: 5 (lower is better)
Translates to: MVAEKRNVFRSRGITLRIGSWWV*SIPTGH
Trigger: GTGACCAGTTGGGATGGACAAAACCCACCAAGATCC...GATCCTCAAAGTGATTCCTCGAGATCGGAAAACATTCCTCTTCTCTGCCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CAA 90 bp GGCAGAGAAGAGGAATGTTTTCCGATCTCGAGGAATCACTTTGAGGATCTTGTCCTTACTCTGACTCATTaGTCCATGGAGGGGGATGGC +
Preference number: 5 (lower is better)
Translates to: GREEECFPISRNHFEDLVLTLTH*SMEGDG
Trigger: GCCATCCCCCTCCATGGACAAATGAGTCAGAGTAAG...GACAAGATCCTCAAAGTGATTCCTCGAGATCGGAAAACATTCCTCTTCTCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CAA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTTCCTCACGCACATTTaGAGGACTTCAAAGACTAGT +
Preference number: 5 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNFLTHI*RTSKTS
Trigger: ACTAGTCTTTGAAGTCCTCAAAATGTGCGTGAGGAA...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTACTCAGCTCCTGGTCTaGCCATTCAAGACTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LGVFLRELQILEHPMRMITQLLV*PFKTLH
Trigger: GTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGT...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp AATGACAGGTGCCCGAGGGCAAGTGCATCAAAGCAGTTAGGATTCGAATGCTTGGAGAAATACACCACGTaGGCTGATTGCTTGACATGT +
Preference number: 5 (lower is better)
Translates to: NDRCPRASASKQLGFECLEKYTT*ADCLTC
Trigger: ACATGTCAAGCAATCAGCCAACGTGGTGTATTTCTC...CAAGCATTCGAATCCTAACTGCTTTGATGCACTTGCCCTCGGGCACCTGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp ATGGTGGCAGAGAAGAGGAATGTTTTCCGATCTCGAGGAATCACTTTGAGGATCGCTTCAATCTGGATCTaGGTGGGTTTTGTCCATCCC +
Preference number: 5 (lower is better)
Translates to: MVAEKRNVFRSRGITLRIASIWI*VGFVHP
Trigger: GGGATGGACAAAACCCACCAAGATCCAGATTGAAGC...GATCCTCAAAGTGATTCCTCGAGATCGGAAAACATTCCTCTTCTCTGCCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS GCA 90 bp TTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTTaGTGGCCTCGGTCATTAGGGGGAAAGGATGTTCTCAGAAAAACA +
Preference number: 5 (lower is better)
Translates to: FLRELQILEHPMRMI*WPRSLGGKDVLRKT
Trigger: TGTTTTTCTGAGAACATCCTTTCCCCCTAATGACCGAGGCCAGCAAATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAAAGTTTTTCTCATCCTTaGCCTTCGGCTCCTAACCCA +
Preference number: 5 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKSFSHP*PSAPNP
Trigger: TGGGTTAGGAGCCGAAGGCAAAGGATGAGAAAAACT...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGCAGAGAAGGGCTGATTaGCTCTGGATTCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKQRRAD*LWILEF
Trigger: GAACTCCAGAATCCAGAGCAAATCAGCCCTTCTCTG...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAAACTCAGCTCCTGGTCTaGCCATTCAAGACTCTCCAC +
Preference number: 5 (lower is better)
Translates to: TIKESNAISSSCPALETQTQLLV*PFKTLH
Trigger: GTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGT...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGATAAGACAAGCGATTTaGTCTGTCACCCAGAAGACA +
Preference number: 5 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLIRQAI*SVTQKT
Trigger: TGTCTTCTGGGTGACAGACAAAATCGCTTGTCTTAT...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp GGCTACACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACAAGGGTGCGGACAGATaGGGTACATTTATAGAATAT +
Preference number: 5 (lower is better)
Translates to: GYTHTVVTKPVSSPGLSNKGADR*GTFIEY
Trigger: ATATTCTATAAATGTACCCAATCTGTCCGCACCCTT...GTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGTGTAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp TACAACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTATGAGAGGAAAAGTTaGCTGCTGCTGTTACTGTTG +
Preference number: 5 (lower is better)
Translates to: YNRRETLPPNGLLVLHPLYERKS*LLLLLL
Trigger: CAACAGTAACAGCAGCAGCAAACTTTTCCTCTCATA...CAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp ACAATCAAGGAAAGCAATGCTATTTCCAGCTCATGCCCTGCCTTAGAAACTCAATGTCGGGAAATGAAGTaGGCAGTCGCTCCATCTATC +
Preference number: 5 (lower is better)
Translates to: TIKESNAISSSCPALETQCREMK*AVAPSI
Trigger: GATAGATGGAGCGACTGCCAACTTCATTTCCCGACA...TTGAGTTTCTAAGGCAGGGCATGAGCTGGAAATAGCATTGCTTTCCTTGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGGATAGGACATCAGGCTaGCAAGTTCTAAGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKDRTSG*QVLSAS
Trigger: GGAAGCACTTAGAACTTGCAAGCCTGATGTCCTATC...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp TGGGTTCTGAACCATCCTACAACGTTCAGAGAAGGGCTGATTTGCTCTGGATTCATAAGACAAGCGATTTaGTCTGTCACCCAGAAGACA +
Preference number: 5 (lower is better)
Translates to: WVLNHPTTFREGLICSGFIRQAI*SVTQKT
Trigger: TGTCTTCTGGGTGACAGACAAAATCGCTTGTCTTAT...GAATCCAGAGCAAATCAGCCCTTCTCTGAACGTTGTAGGATGGTTCAGAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp CTTAAACTCAGCTCCTGGTCTTGCCATTCAAGACTCTCCACACTTACTTCAAAGACAGAGGCACCGTTTTaGCATGTATGGTCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: LKLSSWSCHSRLSTLTSKTEAPF*HVWSQR
Trigger: TCTTTGGGACCATACATGCAAAAACGGTGCCTCTGT...CTTTGAAGTAAGTGTGGAGAGTCTTGAATGGCAAGACCAGGAGCTGAGTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAAGAGAAATACACCACGTaGGCTGATTGCTTGACATGT +
Preference number: 5 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKEKYTT*ADCLTC
Trigger: ACATGTCAAGCAATCAGCCAACGTGGTGTATTTCTC...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp CAGAAGAGCACACCCTACTCATGTCATGAGCAAGGAATCAAAGTCGAAGAACAGTGCTCGCTGAAGTTTTaGAACCTTCTTGGTCATGGT +
Preference number: 5 (lower is better)
Translates to: QKSTPYSCHEQGIKVEEQCSLKF*NLLGHG
Trigger: ACCATGACCAAGAAGGTTCAAAAACTTCAGCGAGCA...CTGTTCTTCGACTTTGATTCCTTGCTCATGACATGAGTAGGGTGTGCTCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CAA 90 bp CGGTCGGCTTCATCCATGACCAAGTATTTGAGAGCTCTCAAGTTGAAACCTTTCCCTCATCATCCTGTGTaGGAAAACCTGGTAGTTTCT +
Preference number: 5 (lower is better)
Translates to: RSASSMTKYLRALKLKPFPHHPV*ENLVVS
Trigger: AGAAACTACCAGGTTTTCCAACACAGGATGATGAGG...GAAAGGTTTCAACTTGAGAGCTCTCAAATACTTGGTCATGGATGAAGCCGACCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CAA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTACATCCGTGAACGAGTaGGGTTACATCTCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: FNGAVLLNPENAEPSESPTSVNE*GYISVP
Trigger: GGGGACAGAGATGTAACCCAACTCGTTCACGGATGT...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000326765.10
CDS-3UTR CAA 90 bp AACAGGCGGGAAACACTGCCCCCTAATGGGCTTTTAGTGTTACATCCCTTGTTCGGATTCTGGAGTTCTTaGTATCAGAAATTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: NRRETLPPNGLLVLHPLFGFWSS*YQKFWN
Trigger: ATTCCAGAATTTCTGATACAAAGAACTCCAGAATCC...GAACAAGGGATGTAACACTAAAAGCCCATTAGGGGGCAGTGTTTCCCGCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTTTGTTTAAACTCAGGTaGCTGGGCCCCACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: FNGAVLLNPENAEPSESPLFKLR*LGPTAR
Trigger: TCTGGCTGTGGGGCCCAGCAACCTGAGTTTAAACAA...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAAAACCACCCAGAGAAATaGTTTAAACTCAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKNHPEK*FKLRLL
Trigger: CAGCAACCTGAGTTTAAACAATTTCTCTGGGTGGTT...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTCTGCTGCTGTTACTGTaGCTGCTTCCAAAAGTGCCC +
Preference number: 5 (lower is better)
Translates to: FNGAVLLNPENAEPSESPLLLLL*LLPKVP
Trigger: GGGCACTTTTGGAAGCAGCAACAGTAACAGCAGCAG...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp TTGGTGGGTTTTGTCCATCCCAACTGGTCACAAGCTTCACACAACACATCTGTCATCACTTTGAGGATCTaGTCAACCTCTGTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: LVGFVHPNWSQASHNTSVITLRI*STSVSK
Trigger: TTTTGAGACAGAGGTTGACAAGATCCTCAAAGTGAT...GACAGATGTGTTGTGTGAAGCTTGTGACCAGTTGGGATGGACAAAACCCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS TCA 90 bp GAAGGCCTCTCTGAGACAGTGATATTTGAGTTAAGACCTCACTGTTaGGCAGGAGAAAACGCTTTAAGATCCCAGGAGATAATCATTCCA +
Preference number: 5 (lower is better)
Translates to: EGLSETVIFELRPHC*AGENALRSQEIIIP
Trigger: TGGAATGATTATCTCCTGGGATCTTAAAGCGTTTTCTCCTGCTCAACAGTGAGGTCTTAACTCAAATATCACTGTCTCAGAGAGGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588943.1
CDS-3UTR CAA 90 bp CTTGGTGTTTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTTTCCTCACGCACATTTaGAGGACTTCAAAGACTAGT +
Preference number: 5 (lower is better)
Translates to: LGVFLRELQILEHPMRMIFLTHI*RTSKTS
Trigger: ACTAGTCTTTGAAGTCCTCAAAATGTGCGTGAGGAA...AATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAAACACCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTTGTCGGGAAATGAAGTaGGCAGTCGCTCCATCTATC +
Preference number: 5 (lower is better)
Translates to: FNGAVLLNPENAEPSESPCREMK*AVAPSI
Trigger: GATAGATGGAGCGACTGCCAACTTCATTTCCCGACA...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp ACTCACACAGTAGTGACAAAGCCTGTCTCAAGCCCAGGACTGTCTAACTCAAAAAAGGGTGCGGACAGATaGGGTACATTTATAGAATAT +
Preference number: 5 (lower is better)
Translates to: THTVVTKPVSSPGLSNSKKGADR*GTFIEY
Trigger: ATATTCTATAAATGTACCCAATCTGTCCGCACCCTT...TTTTGAGTTAGACAGTCCTGGGCTTGAGACAGGCTTTGTCACTACTGTGTGAGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS TCA 90 bp GCAGGAGAAAACGCTTTAAGATCCCAGGAGATAATCATTCCAGAGTaGGAGAATTCCAAGTACCAAGACTGTGAAGCTACTAAGGCTATT +
Preference number: 5 (lower is better)
Translates to: AGENALRSQEIIIPE*ENSKYQDCEATKAI
Trigger: AATAGCCTTAGTAGCTTCACAGTCTTGGTACTTGGAATTCTCTCACTCTGGAATGATTATCTCCTGGGATCTTAAAGCGTTTTCTCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588943.1
CDS-3UTR CAA 90 bp TTTAATGGAGCAGTTCTATTGAATCCTGAAAATGCAGAACCCAGTGAATCTCCTGATAGGACATCAGGCTaGCAAGTTCTAAGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: FNGAVLLNPENAEPSESPDRTSG*QVLSAS
Trigger: GGAAGCACTTAGAACTTGCAAGCCTGATGTCCTATC...AGGAGATTCACTGGGTTCTGCATTTTCAGGATTCAATAGAACTGCTCCATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS-3UTR CAA 90 bp TATTTTCCAAGTGGTCAATCAGTCGACCAGGAGTTGCTATTATTATATGTGGTTTTTCCTCCAGCCACCTaGTTCCTGACACCAATAGCA +
Preference number: 5 (lower is better)
Translates to: YFPSGQSVDQELLLLYVVFPPAT*FLTPIA
Trigger: TGCTATTGGTGTCAGGAACAAGGTGGCTGGAGGAAA...AACCACATATAATAATAGCAACTCCTGGTCGACTGATTGACCACTTGGAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CAA 90 bp AATTCTCTTTTACAGAACAGCAGAACTCGAGCCTTCATAAAAGTGATTAACGGCTTGAGAGCTCTCAAGTaGAAACCTTTCGTATTTTCC +
Preference number: 5 (lower is better)
Translates to: NSLLQNSRTRAFIKVINGLRALK*KPFVFS
Trigger: GGAAAATACGAAAGGTTTCAACTTGAGAGCTCTCAA...GCCGTTAATCACTTTTATGAAGGCTCGAGTTCTGCTGTTCTGTAAAAGAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS-3UTR CAA 90 bp ATTAAGTGTTCTATGCGCTGGAAGAGTTCCACATCATACTGTGTGACAAAAGTATCCATGACCAAGTATTaGAGAGCTCTCAAGTTGAAA +
Preference number: 5 (lower is better)
Translates to: IKCSMRWKSSTSYCVTKVSMTKY*RALKLK
Trigger: TTTCAACTTGAGAGCTCTCAAATACTTGGTCATGGA...TACTTTTGTCACACAGTATGATGTGGAACTCTTCCAGCGCATAGAACACTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534843.1
CDS GCA 72 bp CGATGGCGGCGAGGGCGCCCGTTGCGCTCAGCGAGCTaGCGGCCACGTTGGCTACGAGGGAGCGCCTGCGCA +
Preference number: 6 (lower is better)
Translates to: RWRRGRPLRSAS*RPRWLRGSACA
Trigger: TGCGCAGGCGCTCCCTCGTAGCCAACGTGGCCGGCAGCTCGCTGAGCGCAACGGGCGCCCTCGCCGCCATCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS GCA 72 bp GAGCGAGAGCCCCACGATGGCGGCGAGGGCGCCCGTTaGGCTCAGCGAGCTGCCGGCCACGTTGGCTACGAG +
Preference number: 6 (lower is better)
Translates to: EREPHDGGEGAR*AQRAAGHVGYE
Trigger: CTCGTAGCCAACGTGGCCGGCAGCTCGCTGAGCGCAACGGGCGCCCTCGCCGCCATCGTGGGGCTCTCGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS TCA 72 bp GCCCGCGCCTTCCGAGTACCCCTGGCCCGCAGCCGGTaGCACGGCGCGCGGAACATCCGTGAACGAGTTGGG +
Preference number: 6 (lower is better)
Translates to: ARAFRVPLARSR*HGARNIRERVG
Trigger: CCCAACTCGTTCACGGATGTTCCGCGCGCCGTGTCACCGGCTGCGGGCCAGGGGTACTCGGAAGGCGCGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326765.10
ENST00000534843.1
ENST00000540583.5
CDS GCA 72 bp GAATTGTACAGGGCGATGGAGGCGTTCCTCCCGCACTaGAGCAGCTGGCGGTCCCCGCAGCCCTGCCAGCGG +
Preference number: 6 (lower is better)
Translates to: ELYRAMEAFLPH*SSWRSPQPCQR
Trigger: CCGCTGGCAGGGCTGCGGGGACCGCCAGCTGCTGCAGTGCGGGAGGAACGCCTCCATCGCCCTGTACAATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CCA 72 bp GGCAGCTCAGGATCTCTCGCATCTGGTCCTGGCAGGTaGCCGCGATCTCCTGCACCCTCCGCAGCTCCCGGG +
Preference number: 6 (lower is better)
Translates to: GSSGSLASGPGR*PRSPAPSAAPG
Trigger: CCCGGGAGCTGCGGAGGGTGCAGGAGATCGCGGCCACCTGCCAGGACCAGATGCGAGAGATCCTGAGCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CCA 72 bp AGGGCGATGGAGGCGTTCCTCCCGCACTGCAGCAGCTaGCGGTCCCCGCAGCCCTGCCAGCGGCAGAAAAAC +
Preference number: 6 (lower is better)
Translates to: RAMEAFLPHCSS*RSPQPCQRQKN
Trigger: GTTTTTCTGCCGCTGGCAGGGCTGCGGGGACCGCCAGCTGCTGCAGTGCGGGAGGAACGCCTCCATCGCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS GCA 72 bp CTCCCGCACTGCAGCAGCTGGCGGTCCCCGCAGCCCTaGCAGCGGCAGAAAAACTCGAGGCAGCTCAGGATC +
Preference number: 6 (lower is better)
Translates to: LPHCSSWRSPQP*QRQKNSRQLRI
Trigger: GATCCTGAGCTGCCTCGAGTTTTTCTGCCGCTGGCAGGGCTGCGGGGACCGCCAGCTGCTGCAGTGCGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS TCA 72 bp GGCCCGCAGCCGGTGACACGGCGCGCGGAACATCCGTaGACGAGTTGGGTTACATCTCTGTCCCCGCGAAGC +
Preference number: 6 (lower is better)
Translates to: GPQPVTRRAEHP*TSWVTSLSPRS
Trigger: GCTTCGCGGGGACAGAGATGTAACCCAACTCGTTCACGGATGTTCCGCGCGCCGTGTCACCGGCTGCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326765.10
ENST00000534843.1
ENST00000540583.5
CDS CAA 90 bp TGGCCCGCAGCCGGTGACACGGCGCGCGGAACATCCGTGAACGAGTaGGGTTACATCTCTGTCCCCGCGAAGCTGCAGATCGCTGACCGC +
Preference number: 6 (lower is better)
Translates to: WPAAGDTARGTSVNE*GYISVPAKLQIADR
Trigger: GCGGTCAGCGATCTGCAGCTTCGCGGGGACAGAGATGTAACCCAACTCGTTCACGGATGTTCCGCGCGCCGTGTCACCGGCTGCGGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326765.10
ENST00000534843.1
ENST00000540583.5
CDS CAA 90 bp TGGCAGGTGGCCGCGATCTCCTGCACCCTCCGCAGCTCCCGGGAGTaGCAGAAGATCAGCGAGAGATCGGACGTGATGGTGACGGCCCCT +
Preference number: 6 (lower is better)
Translates to: WQVAAISCTLRSSRE*QKISERSDVMVTAP
Trigger: AGGGGCCGTCACCATCACGTCCGATCTCTCGCTGATCTTCTGCAACTCCCGGGAGCTGCGGAGGGTGCAGGAGATCGCGGCCACCTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS TCA 72 bp TGGTGCAGAGCTGAACCCGAGACTCCAGCTGCTCGCTaGGTTCGTCCAGAGCCCCGGTGCAGGACTCCAGGC +
Preference number: 6 (lower is better)
Translates to: WCRAEPETPAAR*VRPEPRCRTPG
Trigger: GCCTGGAGTCCTGCACCGGGGCTCTGGACGAACTCAGCGAGCAGCTGGAGTCTCGGGTTCAGCTCTGCACCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CAA 72 bp GCCGGTGACACGGCGCGCGGAACATCCGTGAACGAGTaGGGTTACATCTCTGTCCCCGCGAAGCTGCAGATC +
Preference number: 6 (lower is better)
Translates to: AGDTARGTSVNE*GYISVPAKLQI
Trigger: GATCTGCAGCTTCGCGGGGACAGAGATGTAACCCAACTCGTTCACGGATGTTCCGCGCGCCGTGTCACCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000326765.10
ENST00000534843.1
ENST00000540583.5
CDS CCA 72 bp CAGAAAAACTCGAGGCAGCTCAGGATCTCTCGCATCTaGTCCTGGCAGGTGGCCGCGATCTCCTGCACCCTC +
Preference number: 6 (lower is better)
Translates to: QKNSRQLRISRI*SWQVAAISCTL
Trigger: GAGGGTGCAGGAGATCGCGGCCACCTGCCAGGACCAGATGCGAGAGATCCTGAGCTGCCTCGAGTTTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CAA 72 bp CAGAAAAACAGCCCTGCACGCTGGTCAGCAGAGATCTaGAGGTCGTGGCCACGACTGGACTTGGTGCAGAGC +
Preference number: 6 (lower is better)
Translates to: QKNSPARWSAEI*RSWPRLDLVQS
Trigger: GCTCTGCACCAAGTCCAGTCGTGGCCACGACCTCAAGATCTCTGCTGACCAGCGTGCAGGGCTGTTTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS TCA 72 bp GTCCCCCTCCGCCCGCCTGGGGATGAGGAAGCCACGTaGGCCAAAGAAGACGATGAAGTAGACAGAATTGTA +
Preference number: 6 (lower is better)
Translates to: VPLRPPGDEEAT*AKEDDEVDRIV
Trigger: TACAATTCTGTCTACTTCATCGTCTTCTTTGGCTCACGTGGCTTCCTCATCCCCAGGCGGGCGGAGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS TCA 72 bp AGAAAAACAGCCCTGCACGCTGGTCAGCAGAGATCTTaGGGTCGTGGCCACGACTGGACTTGGTGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: RKTALHAGQQRS*GRGHDWTWCRA
Trigger: AGCTCTGCACCAAGTCCAGTCGTGGCCACGACCTCAAGATCTCTGCTGACCAGCGTGCAGGGCTGTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CCA 72 bp GGGAAAGGATGTTCTCAGAAAAACAGCCCTGCACGCTaGTCAGCAGAGATCTTGAGGTCGTGGCCACGACTG +
Preference number: 6 (lower is better)
Translates to: GKGCSQKNSPAR*SAEILRSWPRL
Trigger: CAGTCGTGGCCACGACCTCAAGATCTCTGCTGACCAGCGTGCAGGGCTGTTTTTCTGAGAACATCCTTTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CCA 72 bp GTGCTCGTTGCAGTTTTATTCCTGAGGATGGGAAGTTaGGGGCAATCTGGTGTCCGTCACTTTCCAAGGCAG +
Preference number: 6 (lower is better)
Translates to: VLVAVLFLRMGS*GQSGVRHFPRQ
Trigger: CTGCCTTGGAAAGTGACGGACACCAGATTGCCCCCAACTTCCCATCCTCAGGAATAAAACTGCAACGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588943.1
CDS CAA 72 bp GGTGCTCGTTGCAGTTTTATTCCTGAGGATGGGAAGTaGGGGGCAATCTGGTGTCCGTCACTTTCCAAGGCA +
Preference number: 6 (lower is better)
Translates to: GARCSFIPEDGK*GAIWCPSLSKA
Trigger: TGCCTTGGAAAGTGACGGACACCAGATTGCCCCCAACTTCCCATCCTCAGGAATAAAACTGCAACGAGCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588943.1
CDS GCA 72 bp GAGCTACAAATTCTGGAGCATCCCATGAGGATGATTTaGTGGCCTCGGTCATTAGGGGGAAAGGATGTTCTC +
Preference number: 6 (lower is better)
Translates to: ELQILEHPMRMI*WPRSLGGKDVL
Trigger: GAGAACATCCTTTCCCCCTAATGACCGAGGCCAGCAAATCATCCTCATGGGATGCTCCAGAATTTGTAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CAA 72 bp GGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTaGCTGGCCTCGGTCATTAGGGGGAAAGGATGTTCT +
Preference number: 6 (lower is better)
Translates to: GATNSGASHEDD*LASVIRGKGCS
Trigger: AGAACATCCTTTCCCCCTAATGACCGAGGCCAGCAAATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CCA 72 bp CTACAAATTCTGGAGCATCCCATGAGGATGATTTGCTaGCCTCGGTCATTAGGGGGAAAGGATGTTCTCAGA +
Preference number: 6 (lower is better)
Translates to: LQILEHPMRMIC*PRSLGGKDVLR
Trigger: TCTGAGAACATCCTTTCCCCCTAATGACCGAGGCCAGCAAATCATCCTCATGGGATGCTCCAGAATTTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CAA 90 bp TTTCCTAAGGGAGCTACAAATTCTGGAGCATCCCATGAGGATGATTaGCTGGCCTCGGTCATTAGGGGGAAAGGATGTTCTCAGAAAAAC +
Preference number: 6 (lower is better)
Translates to: FPKGATNSGASHEDD*LASVIRGKGCSQKN
Trigger: GTTTTTCTGAGAACATCCTTTCCCCCTAATGACCGAGGCCAGCAAATCATCCTCATGGGATGCTCCAGAATTTGTAGCTCCCTTAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326765.10
ENST00000356591.5
CDS CCA 72 bp GTGAAACCCTGTTCACATAAAAATTACAGAGTAACCTaGGGAGGGTGGGTTGTGGGGATAACTGTGAGATTG +
Preference number: 6 (lower is better)
Translates to: VKPCSHKNYRVT*GGWVVGITVRL
Trigger: CAATCTCACAGTTATCCCCACAACCCACCCTCCCCAGGTTACTCTGTAATTTTTATGTGAACAGGGTTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588943.1
CDS TCA 72 bp AACGCTTTAAGATCCCAGGAGATAATCATTCCAGAGTaGGAGAATTCCAAGTACCAAGACTGTGAAGCTACT +
Preference number: 6 (lower is better)
Translates to: NALRSQEIIIPE*ENSKYQDCEAT
Trigger: AGTAGCTTCACAGTCTTGGTACTTGGAATTCTCTCACTCTGGAATGATTATCTCCTGGGATCTTAAAGCGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588943.1
CDS TCA 72 bp TCTGAGACAGTGATATTTGAGTTAAGACCTCACTGTTaGGCAGGAGAAAACGCTTTAAGATCCCAGGAGATA +
Preference number: 6 (lower is better)
Translates to: SETVIFELRPHC*AGENALRSQEI
Trigger: TATCTCCTGGGATCTTAAAGCGTTTTCTCCTGCTCAACAGTGAGGTCTTAACTCAAATATCACTGTCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588943.1