RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for APBB3 (Homo sapiens)

Ensembl gene IDs: ENSG00000113108

Ensembl transcript IDs: ENST00000354402.9, ENST00000356738.6, ENST00000357560.9, ENST00000358580.9, ENST00000412920.7, ENST00000467078.5, ENST00000503850.1, ENST00000503979.1, ENST00000505617.5, ENST00000506165.1, ENST00000506289.5, ENST00000506958.5, ENST00000509914.5, ENST00000510241.5, ENST00000511201.2, ENST00000511459.1, ENST00000511463.1, ENST00000511896.5, ENST00000513507.5, ENST00000515056.5

Found 683 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTaGGCACCCCAGGCCTTGCCTCGAGCTGCAGAGGCCACAAGACAC +
Preference number: 1 (lower is better)
Translates to: ESMELVRLSRRRARA*APQALPRAAEATRH
Trigger: GTGTCTTGTGGCCTCTGCAGCTCGAGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR TCA 90 bp CCCCCTGCATGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTaGCGGCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGG +
Preference number: 1 (lower is better)
Translates to: PPAWGWHQKAAHWKL*RPRSAMRPKVCGSR
Trigger: CCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR GCA 90 bp CCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCTCGAGCTaGAGAGGCCACAAGACACTTCTGGTACTGAACCATACAGGCAGC +
Preference number: 1 (lower is better)
Translates to: PQAGTGLGTPGLASS*RGHKTLLVLNHTGS
Trigger: GCTGCCTGTATGGTTCAGTACCAGAAGTGTCTTGTGGCCTCTGCAGCTCGAGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR GCA 90 bp CACAGCTTCAGAGAGTCCCCCTGCATGGGGCTGGCACCAGAAGGCTaGGCACTGGAAGCTCTGACGGCCCAGGTCAGCGATGAGGCCAAA +
Preference number: 1 (lower is better)
Translates to: HSFRESPCMGLAPEG*ALEALTAQVSDEAK
Trigger: TTTGGCCTCATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGGGGACTCTCTGAAGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR CCA 90 bp CTGGAAGCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTGTGTaGGTCGCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCA +
Preference number: 1 (lower is better)
Translates to: LEALTAQVSDEAKGV*VAANTNKCHKAHRA
Trigger: TGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGCTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR TCA 90 bp GCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTCTaGGCAGCTTGGCTTACCGCATCCAGCAGCTCCACTTGCCGTGGC +
Preference number: 1 (lower is better)
Translates to: ALVTGSVPIYSASYF*AAWLTASSSSTCRG
Trigger: GCCACGGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR GCA 90 bp ATCCATGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTaGCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAGCTC +
Preference number: 1 (lower is better)
Translates to: IHAHGLGDWQCPHIQ*LVLLSSLAYRIQQL
Trigger: GAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCATGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR CCA 90 bp CAGGATACCTGGTTTTCACTCACCTGTCACTGTTCCGGAAGCATGTaGGAGCACAGAAGGGAATCAGCCCAGCCTCTCGGACTCTCCCCA +
Preference number: 1 (lower is better)
Translates to: QDTWFSLTCHCSGSM*EHRRESAQPLGLSP
Trigger: TGGGGAGAGTCCGAGAGGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACAGTGACAGGTGAGTGAAAACCAGGTATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511896.5
3UTR TCA 90 bp CTTCAGGAGAGATGGGGTCTGGGGAGCAGCAAGAGGCATCACCACTaGCCTCTACTCGCTCTGACAAGATCTGGGCACAAAGCCCATGTA +
Preference number: 1 (lower is better)
Translates to: LQERWGLGSSKRHHH*PLLALTRSGHKAHV
Trigger: TACATGGGCTTTGTGCCCAGATCTTGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGACCCCATCTCTCCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR TCA 90 bp AGGGACAGGCAGAGAAGGCTTCAAGGAGTGACAGGCTATAGGCCTTaGGGAATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTAC +
Preference number: 1 (lower is better)
Translates to: RDRQRRLQGVTGYRP*GIKRYRVRHGPRAY
Trigger: GTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTATTCCTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTCTCTGCCTGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR TCA 90 bp TGGCAATGGCCTTGGCAGGGACATCACAGCAAAACACATGGCACTTaGGCATACAGCTATCTTTGTCACTTGCCACAAAAGCGAAGTCCC +
Preference number: 1 (lower is better)
Translates to: WQWPWQGHHSKTHGT*AYSYLCHLPQKRSP
Trigger: GGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTTGCTGTGATGTCCCTGCCAAGGCCATTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp GCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCAGGCGGGCACGGGCCTaGGCACCCCAGGCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: AGPLEPQAGTGLGTPGLARRARA*APQALP
Trigger: AGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCT...GGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp GCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCCTGGCACCAGAAGGCTaGGCACTGGAAGCTCTGACG +
Preference number: 2 (lower is better)
Translates to: AGPLEPQAGTGLGTPGLALAPEG*ALEALT
Trigger: CGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAG...GGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp GTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCTCGAGGTCCTACGTTGTGGTaGAGTGCCTCCCAGTCATCC +
Preference number: 2 (lower is better)
Translates to: VRLSRRRARAWAPQALPRGPTLW*SASQSS
Trigger: GGATGACTGGGAGGCACTGCACCACAACGTAGGACC...TCGAGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR GCA 90 bp GAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGTTCAGAGAGTCCCCCTaGATGGGGCTGGCACCAGAA +
Preference number: 2 (lower is better)
Translates to: ELVRLSRRRARAWAPQALFRESP*MGLAPE
Trigger: TTCTGGTGCCAGCCCCATGCAGGGGGACTCTCTGAA...CAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp TGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCGGGCAGGGGACCTCCTaGGGAATCCATGGAGCTGGT +
Preference number: 2 (lower is better)
Translates to: WGIHGAGPLEPQAGTGLGGQGTS*GIHGAG
Trigger: ACCAGCTCCATGGATTCCCCAGGAGGTCCCCTGCCC...GCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp GAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCGGCCTTGCCTCGAGCTaGAGAGGCCACAAGACACTT +
Preference number: 2 (lower is better)
Translates to: ESMELVRLSRRRARAWAPGLASS*RGHKTL
Trigger: AAGTGTCTTGTGGCCTCTGCAGCTCGAGGCAAGGCC...GGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp GTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCTCGACACTGGCAATGGCCTTaGCAGGGACATCACAGCAAA +
Preference number: 2 (lower is better)
Translates to: VRLSRRRARAWAPQALPRHWQWP*QGHHSK
Trigger: TTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTG...TCGAGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp GTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCTCGACGCTCTGACAAGATCTaGGCACAAAGCCCATGTAGG +
Preference number: 2 (lower is better)
Translates to: VRLSRRRARAWAPQALPRRSDKI*AQSPCR
Trigger: CCTACATGGGCTTTGTGCCCAGATCTTGTCAGAGCG...TCGAGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp GAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGTGCCTGAATGGGGTGTaGAGTCATGAGAGAGTCAGA +
Preference number: 2 (lower is better)
Translates to: ELVRLSRRRARAWAPQALCLNGV*SHERVR
Trigger: TCTGACTCTCTCATGACTGCACACCCCATTCAGGCA...CAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp TGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCCGCTCTGACAAGATCTaGGCACAAAGCCCATGTAGG +
Preference number: 2 (lower is better)
Translates to: WGIHGAGPLEPQAGTGLGRSDKI*AQSPCR
Trigger: CCTACATGGGCTTTGTGCCCAGATCTTGTCAGAGCG...GCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp CCTGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGCATGGCCTTGGTGACTaGCAGTGTCCCCATATACAG +
Preference number: 2 (lower is better)
Translates to: PGESMELVRLSRRRARAWHGLGD*QCPHIQ
Trigger: CTGTATATGGGGACACTGCCAGTCACCAAGGCCATG...CCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp TGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCCATGGCCTTGGTGACTaGCAGTGTCCCCATATACAG +
Preference number: 2 (lower is better)
Translates to: WGIHGAGPLEPQAGTGLGHGLGD*QCPHIQ
Trigger: CTGTATATGGGGACACTGCCAGTCACCAAGGCCATG...GCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp GGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTACAGGCTATAGGCCTTaGGGAATAAAACGGTACAGA +
Preference number: 2 (lower is better)
Translates to: GAGPLEPQAGTGLGTPGLTGYRP*GIKRYR
Trigger: TCTGTACCGTTTTATTCCTCAAGGCCTATAGCCTGT...AAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATGGAGCTGGTCCGCTTaGGCCGCAGGCGGGCACGGG +
Preference number: 2 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRWSWSA*AAGGHG
Trigger: CCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCA...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp CATGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTTGGAGCTGGTCCGCTTaGGCCGCAGGCGGGCACGGG +
Preference number: 2 (lower is better)
Translates to: HAHGLGDWQCPHIQCLVLWSWSA*AAGGHG
Trigger: CCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCA...AAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp TGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGACACCCCGCTGGAGCTGGTCCGCTTaGGCCGCAGGCGGGCACGGG +
Preference number: 2 (lower is better)
Translates to: WSREGFSRKASRKEKTPRWSWSA*AAGGHG
Trigger: CCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCA...GCGGGGTGTCTTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp GAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGGCTATCTTTGTCACTTaGCACAAAAGCGAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: ELVRLSRRRARAWAPQALAIFVT*HKSEVP
Trigger: AGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC...CAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp GTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAGCTCCACTTGCCCCCCCTGCATGGGGCTaGCACCAGAAGGCTGCGCAC +
Preference number: 2 (lower is better)
Translates to: VPRTSEQLGLPHPAAPLAPPAWG*HQKAAH
Trigger: GTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGGGG...GGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCAC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp CATGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTAGGCGGGCACGGGCCTaGGCACCCCAGGCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: HAHGLGDWQCPHIQCLVLRRARA*APQALP
Trigger: AGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCT...AAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp GCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCAAAACACATGGCACTTaGGCATACAGCTATCTTTGT +
Preference number: 2 (lower is better)
Translates to: AGPLEPQAGTGLGTPGLAKTHGT*AYSYLC
Trigger: ACAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTT...GGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp GAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTGAGAGTCAGACACACTaGGCATGGTGGGGACCCAGG +
Preference number: 2 (lower is better)
Translates to: EGCALEALTAQVSDEAKGESQTH*AWWGPR
Trigger: CCTGGGTCCCCACCATGCTCAGTGTGTCTGACTCTC...ACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCCCCCTGCATGGGGCTaGCACCAGAAGGCTGCGCAC +
Preference number: 2 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTPPAWG*HQKAAH
Trigger: GTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGGGG...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR CCA 90 bp TCCCCATATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAAGGCGGGCACGGGCCTaGGCACCCCAGGCCTTGCCT +
Preference number: 2 (lower is better)
Translates to: SPYTVPRTSEQLGLPHPARRARA*APQALP
Trigger: AGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCT...TGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp CCTGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGACAGGCTATAGGCCTTaGGGAATAAAACGGTACAGA +
Preference number: 2 (lower is better)
Translates to: PGESMELVRLSRRRARAWTGYRP*GIKRYR
Trigger: TCTGTACCGTTTTATTCCTCAAGGCCTATAGCCTGT...CCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp CTGCATGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGGTAGACACTTCTGGTACTaGACCATACAGGCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: LHGAGTRRLRTGSSDGPGRHFWY*TIQAAC
Trigger: GCAGGCTGCCTGTATGGTTCAGTACCAGAAGTGTCT...ACCTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp TGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGACACCCCGCCCGCTTTCGAGGGGTTaGCCCTGCACCGCCAACCCC +
Preference number: 2 (lower is better)
Translates to: WSREGFSRKASRKEKTPRPLSRG*PCTANP
Trigger: GGGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGG...GCGGGGTGTCTTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp CATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCCCGCTTTCGAGGGGTTaGCCCTGCACCGCCAACCCC +
Preference number: 2 (lower is better)
Translates to: HGLGDWQCPHIQCLVLLSPLSRG*PCTANP
Trigger: GGGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGG...GCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp GAGCACAGAAGGGAATCAGCCCAGCCTCTCGGACTCTCCCCAAACTGTCCCTGCGTGGGGATCACAGCCTaGAGCCGGGAGGGAGAAGTA +
Preference number: 2 (lower is better)
Translates to: EHRRESAQPLGLSPNCPCVGITA*SREGEV
Trigger: TACTTCTCCCTCCCGGCTGCAGGCTGTGATCCCCAC...GCAGGGACAGTTTGGGGAGAGTCCGAGAGGCTGGGCTGATTCCCTTCTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511896.5
3UTR-3UTR TCA 90 bp AGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGATGGAGCTGGTCCGCTTaGGCCGCAGGCGGGCACGGG +
Preference number: 2 (lower is better)
Translates to: RAYGAERVSAGRHQEKRRWSWSA*AAGGHG
Trigger: CCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCA...TCTTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCCCCCCTGCATGGGGCTaGCACCAGAAGGCTGCGCAC +
Preference number: 2 (lower is better)
Translates to: WAINRRWTRIGGTGREGFPPAWG*HQKAAH
Trigger: GTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGGGG...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp CCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCCCCCCTGCATGGGGCTaGCACCAGAAGGCTGCGCAC +
Preference number: 2 (lower is better)
Translates to: PSQISLGHMEQRGFQPEGPPAWG*HQKAAH
Trigger: GTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGGGG...GCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp GAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTGACCTCTACTCGCTCTaGCAAGATCTGGGCACAAAG +
Preference number: 2 (lower is better)
Translates to: EGCALEALTAQVSDEAKGDLYSL*QDLGTK
Trigger: CTTTGTGCCCAGATCTTGTCAGAGCGAGTAGAGGTC...ACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp CAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGACTGGCACCAGAAGGCTaGGCACTGGAAGCTCTGACG +
Preference number: 2 (lower is better)
Translates to: QLSRVGQGQGTQGPKERGLAPEG*ALEALT
Trigger: CGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAG...TCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR CCA 90 bp CAGCACATCCATGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCGCCCATGTAGGGCACTaGCAATGGCCTTGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: QHIHAHGLGDWQCPHIQCAHVGH*QWPWQG
Trigger: TCCCTGCCAAGGCCATTGCCAGTGCCCTACATGGGC...GCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCATGGATGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR CAA 90 bp GACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCAGCTaGGCTTACCGCATCCAGCAGCTCCACTTGCCGTGGCAGGTCTTC +
Preference number: 2 (lower is better)
Translates to: DWQCPHIQCLVLLSS*AYRIQQLHLPWQVF
Trigger: GAAGACCTGCCACGGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp GCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACGCTATAAAGTGTTACTaGGGTAGAGCCAACTGTCCA +
Preference number: 2 (lower is better)
Translates to: ALTAQVSDEAKGVWVAANAIKCY*GRANCP
Trigger: TGGACAGTTGGCTCTACCTCAGTAACACTTTATAGC...GTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR TCA 90 bp GCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATGGCTCTGCCCATGGCCTTGGTaGCTGGCAGTGTCCCCATAT +
Preference number: 2 (lower is better)
Translates to: AANTNKCHKAHRALPQWLCPWPW*LAVSPY
Trigger: ATATGGGGACACTGCCAGTCACCAAGGCCATGGGCA...GAGCCATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp GCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATGGCTCGGTCCTACGTTGTGGTaGAGTGCCTCCCAGTCATCC +
Preference number: 2 (lower is better)
Translates to: AANTNKCHKAHRALPQWLGPTLW*SASQSS
Trigger: GGATGACTGGGAGGCACTGCACCACAACGTAGGACC...GAGCCATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR CCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAGGGTCCTACGTTGTaGTGCAGTGCCTCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTQGPTL*CSASQS
Trigger: TGACTGGGAGGCACTGCACCACAACGTAGGACCCTG...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR CCA 90 bp GCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGGGGCAGGGGACCTCCTaGGGAATCCATGGAGCTGGT +
Preference number: 2 (lower is better)
Translates to: AFPDKFRAYGAERVSAGRGQGTS*GIHGAG
Trigger: ACCAGCTCCATGGATTCCCCAGGAGGTCCCCTGCCC...CCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp GGGTCGCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATGTAGGGCACTGGCAATaGCCTTGGCAGGGACATCAC +
Preference number: 2 (lower is better)
Translates to: GSRPTPINVTRRTGHCHNVGHWQ*PWQGHH
Trigger: GTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTAC...ATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGCGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp CAGCACATCCATGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCGTAGGGCACTGGCAATaGCCTTGGCAGGGACATCAC +
Preference number: 2 (lower is better)
Translates to: QHIHAHGLGDWQCPHIQCVGHWQ*PWQGHH
Trigger: GTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTAC...GCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCATGGATGTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp TCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCTCTGACAAGATCGGGGATCAGCATCAGTaGGGATCACAGCCTGCAGCC +
Preference number: 2 (lower is better)
Translates to: SGEQQEASPLTSTRSDKIGDQHQ*GSQPAA
Trigger: GGCTGCAGGCTGTGATCCCCACTGATGCTGATCCCC...GATCTTGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511896.5
3UTR-3UTR GCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCCTGGCACCAGAAGGCTaGGCACTGGAAGCTCTGACG +
Preference number: 2 (lower is better)
Translates to: WAINRRWTRIGGTGREGFLAPEG*ALEALT
Trigger: CGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAG...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp CATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCTTCAGAGAGTCCCCCTaGATGGGGCTGGCACCAGAA +
Preference number: 2 (lower is better)
Translates to: HGLGDWQCPHIQCLVLLSFRESP*MGLAPE
Trigger: TTCTGGTGCCAGCCCCATGCAGGGGGACTCTCTGAA...GCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp GCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATGCCCATGTAGGGCACTaGCAATGGCCTTGGCAGGGA +
Preference number: 2 (lower is better)
Translates to: AVSPYTVPRTSEQLGLPHAHVGH*QWPWQG
Trigger: TCCCTGCCAAGGCCATTGCCAGTGCCCTACATGGGC...ATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGACACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp GCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACACCAATAAACATGGCCTTGGTGACTaGCAGTGTCCCCATATACAG +
Preference number: 2 (lower is better)
Translates to: AQVSDEAKGVWVAANTNKHGLGD*QCPHIQ
Trigger: CTGTATATGGGGACACTGCCAGTCACCAAGGCCATG...TTTATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp CAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGAAGGCTTCAAGGAGTaGCAGGCTATAGGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: QLSRVGQGQGTQGPKERGEGFKE*QAIGLE
Trigger: CTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTC...TCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR TCA 90 bp GGGTCGCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATAAGAGGCATCACCACTaGCCTCTACTCGCTCTGACA +
Preference number: 2 (lower is better)
Translates to: GSRPTPINVTRRTGHCHNKRHHH*PLLALT
Trigger: TGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTT...ATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGCGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp GACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCATTCAGAGAGTCCCCCTaGATGGGGCTGGCACCAGAA +
Preference number: 2 (lower is better)
Translates to: DPEPTSPAFPDKFRAYGAFRESP*MGLAPE
Trigger: TTCTGGTGCCAGCCCCATGCAGGGGGACTCTCTGAA...TGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp AGCCCATGTAGGGCACTGGCAATGGCCTTGGCAGGGACATCACAGCAAAACACAACCATACAGGCAGCCTaGACAGCTTCAGAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: SPCRALAMALAGTSQQNTTIQAA*TASESP
Trigger: GGGACTCTCTGAAGCTGTGCAGGCTGCCTGTATGGT...TGTGTTTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTACATGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp GCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGGGCCTTGCCTCGAGCTaGAGAGGCCACAAGACACTT +
Preference number: 2 (lower is better)
Translates to: AFPDKFRAYGAERVSAGRGLASS*RGHKTL
Trigger: AAGTGTCTTGTGGCCTCTGCAGCTCGAGGCAAGGCC...CCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGCACTGGCAATGGCCTTaGCAGGGACATCACAGCAAA +
Preference number: 2 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKHWQWP*QGHHSK
Trigger: TTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTG...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR CCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCGCTCTGACAAGATCTaGGCACAAAGCCCATGTAGG +
Preference number: 2 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTRSDKI*AQSPCR
Trigger: CCTACATGGGCTTTGTGCCCAGATCTTGTCAGAGCG...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR TCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGACAGGCTATAGGCCTTaGGGAATAAAACGGTACAGA +
Preference number: 2 (lower is better)
Translates to: SRVGQGQGTQGPKERGARTGYRP*GIKRYR
Trigger: TCTGTACCGTTTTATTCCTCAAGGCCTATAGCCTGT...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR TCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAGAAGGCTTCAAGGAGTaGCAGGCTATAGGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPREGFKE*QAIGLE
Trigger: CTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTC...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGGAAGGCTTCAAGGAGTaGCAGGCTATAGGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: VTEVEPTVQGWTGARNTREGFKE*QAIGLE
Trigger: CTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTC...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR TCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAGACCTCTACTCGCTCTaGCAAGATCTGGGCACAAAG +
Preference number: 2 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRDLYSL*QDLGTK
Trigger: CTTTGTGCCCAGATCTTGTCAGAGCGAGTAGAGGTC...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp GTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGATACGTTGTGGTGCAGTaGCTCCCAGTCATCCGTATA +
Preference number: 2 (lower is better)
Translates to: VEPTVQGWTGARNTRTQGYVVVQ*LPVIRI
Trigger: TATACGGATGACTGGGAGGCACTGCACCACAACGTA...TCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR GCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGTACGTTGTGGTGCAGTaGCTCCCAGTCATCCGTATA +
Preference number: 2 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEYVVVQ*LPVIRI
Trigger: TATACGGATGACTGGGAGGCACTGCACCACAACGTA...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR GCA 90 bp GCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGACCATACAGGCAGCCTaGACAGCTTCAGAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: AWTQSLLPQPSQISLGHMTIQAA*TASESP
Trigger: GGGACTCTCTGAAGCTGTGCAGGCTGCCTGTATGGT...CATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp TCCCCATATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAACCATACAGGCAGCCTaGACAGCTTCAGAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: SPYTVPRTSEQLGLPHPATIQAA*TASESP
Trigger: GGGACTCTCTGAAGCTGTGCAGGCTGCCTGTATGGT...TGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGGCTATCTTTGTCACTTaGCACAAAAGCGAAGTCCCT +
Preference number: 2 (lower is better)
Translates to: SRVGQGQGTQGPKERGARAIFVT*HKSEVP
Trigger: AGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR TCA 90 bp TTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCAGAAGGCTTCAAGGAGTaGCAGGCTATAGGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: LGMDPEPTSPAFPDKFRAEGFKE*QAIGLE
Trigger: CTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTC...TGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp TATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAGCTCCAGAAGGCTTCAAGGAGTaGCAGGCTATAGGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: YTVPRTSEQLGLPHPAAPEGFKE*QAIGLE
Trigger: CTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTC...TGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp GCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACACCAATAAAGCTATAAAGTGTTACTaGGGTAGAGCCAACTGTCCA +
Preference number: 2 (lower is better)
Translates to: AQVSDEAKGVWVAANTNKAIKCY*GRANCP
Trigger: TGGACAGTTGGCTCTACCTCAGTAACACTTTATAGC...TTTATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR TCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAGACACTTCTGGTACTaGACCATACAGGCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNRHFWY*TIQAAC
Trigger: GCAGGCTGCCTGTATGGTTCAGTACCAGAAGTGTCT...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR TCA 90 bp TTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGAGAGTCAGACACACTaGGCATGGTGGGGACCCAGG +
Preference number: 2 (lower is better)
Translates to: LGHMEQRGFQPEGIKKREESQTH*AWWGPR
Trigger: CCTGGGTCCCCACCATGCTCAGTGTGTCTGACTCTC...TTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp TTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCAGGGAGAAGTAGCTCTTaGTTGGGGGATGTAGGCATC +
Preference number: 2 (lower is better)
Translates to: LGMDPEPTSPAFPDKFRAGRSSS*LGDVGI
Trigger: GATGCCTACATCCCCCAAGCAAGAGCTACTTCTCCC...TGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511896.5
3UTR-3UTR CCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCGCAATAAATAGACGGTaGACAAGGATCGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTAINRR*TRIGGT
Trigger: TGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR CCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGCAATAAATAGACGGTaGACAAGGATCGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKAINRR*TRIGGT
Trigger: TGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR CCA 90 bp GCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGCACTGGCAATGGCCTTaGCAGGGACATCACAGCAAA +
Preference number: 2 (lower is better)
Translates to: AWTQSLLPQPSQISLGHMHWQWP*QGHHSK
Trigger: TTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTG...CATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp TCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCTCTGACAAGATCTGTTCCGGAAGCATGTaGGAGCACAGAAGGGAATCA +
Preference number: 2 (lower is better)
Translates to: SGEQQEASPLTSTRSDKICSGSM*EHRRES
Trigger: TGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACA...GATCTTGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp CTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGAGACACTTCTGGTACTaGACCATACAGGCAGCCTGC +
Preference number: 2 (lower is better)
Translates to: LPQPSQISLGHMEQRGFQRHFWY*TIQAAC
Trigger: GCAGGCTGCCTGTATGGTTCAGTACCAGAAGTGTCT...CTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp GACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCATACGTTGTGGTGCAGTaGCTCCCAGTCATCCGTATA +
Preference number: 2 (lower is better)
Translates to: DPEPTSPAFPDKFRAYGAYVVVQ*LPVIRI
Trigger: TATACGGATGACTGGGAGGCACTGCACCACAACGTA...TGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp TGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGTACGTTGTGGTGCAGTaGCTCCCAGTCATCCGTATA +
Preference number: 2 (lower is better)
Translates to: WTQSLLPQPSQISLGHMEYVVVQ*LPVIRI
Trigger: TATACGGATGACTGGGAGGCACTGCACCACAACGTA...CTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp GCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGTGTCCCCATATACAGTaGCTCGTACTTCTGAGCAGC +
Preference number: 2 (lower is better)
Translates to: AFPDKFRAYGAERVSAGRCPHIQ*LVLLSS
Trigger: GCTGCTCAGAAGTACGAGGCACTGTATATGGGGACA...CCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp TCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCTCTGACAAGATCACAGGCTATAGGCCTTaGGGAATAAAACGGTACAGA +
Preference number: 2 (lower is better)
Translates to: SGEQQEASPLTSTRSDKITGYRP*GIKRYR
Trigger: TCTGTACCGTTTTATTCCTCAAGGCCTATAGCCTGT...GATCTTGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp AGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGAGAAGGCTTCAAGGAGTaGCAGGCTATAGGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: RAYGAERVSAGRHQEKRREGFKE*QAIGLE
Trigger: CTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTC...TCTTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR TCA 90 bp ACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGAAGGCTTCAAGGAGTaGCAGGCTATAGGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: TSPAFPDKFRAYGAERVSEGFKE*QAIGLE
Trigger: CTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTC...TGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATGCAATAAATAGACGGTaGACAAGGATCGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNAINRR*TRIGGT
Trigger: TGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR CAA 90 bp CTGGCAATGGCCTTGGCAGGGACATCACAGCAAAACACATGGCACTaGAGCATACAGCTATCTTTGTCACTTGCCACAAAAGCGAAGTCC +
Preference number: 2 (lower is better)
Translates to: LAMALAGTSQQNTWH*SIQLSLSLATKAKS
Trigger: GGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR GCA 90 bp AGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGATACGTTGTGGTGCAGTaGCTCCCAGTCATCCGTATA +
Preference number: 2 (lower is better)
Translates to: RAYGAERVSAGRHQEKRRYVVVQ*LPVIRI
Trigger: TATACGGATGACTGGGAGGCACTGCACCACAACGTA...TCTTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CCA 90 bp TACCTGGTTTTCACTCACCTGTCACTGTTCCGGAAGCATGTGGGAGCACAGAAGGCAATAAATAGACGGTaGACAAGGATCGGAGGGACA +
Preference number: 2 (lower is better)
Translates to: YLVFTHLSLFRKHVGAQKAINRR*TRIGGT
Trigger: TGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC...CTTCTGTGCTCCCACATGCTTCCGGAACAGTGACAGGTGAGTGAAAACCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511896.5
3UTR-3UTR TCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAACAGGCTATAGGCCTTaGGGAATAAAACGGTACAGA +
Preference number: 2 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKTGYRP*GIKRYR
Trigger: TCTGTACCGTTTTATTCCTCAAGGCCTATAGCCTGT...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CAA 90 bp TGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCCCCGCTTTCGAGGGGTaGCCCCTGCACCGCCAACCC +
Preference number: 3 (lower is better)
Translates to: WGIHGAGPLEPQAGTGLGPAFEG*PLHRQP
Trigger: GGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGGG...GCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CAA 90 bp GAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGAGCCAGGGTCCTACGTaGTGGTGCAGTGCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: ELVRLSRRRARAWAPQALSQGPT*WCSASQ
Trigger: CTGGGAGGCACTGCACCACAACGTAGGACCCTGGCT...CAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR CAA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGTGGGCACCCCAGGCCTaGCCTCGAGCTGCAGAGGCC +
Preference number: 3 (lower is better)
Translates to: SRVGQGQGTQGPKERGARWAPQA*PRAAEA
Trigger: GGCCTCTGCAGCTCGAGGCAAGGCCTGGGGTGCCCA...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR CAA 90 bp GCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACACCAATAAAATGGAGCTGGTCCGCTaGAGCCGCAGGCGGGCACGG +
Preference number: 3 (lower is better)
Translates to: AQVSDEAKGVWVAANTNKMELVR*SRRRAR
Trigger: CCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCAT...TTTATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR TCA 72 bp CTGCGCACTGGAAGCTCTGACGGCCCAGGTCAGCGATaGGGCCAAAGGTGTGTGGGTCGCGGCCAACACCAA +
Preference number: 3 (lower is better)
Translates to: LRTGSSDGPGQR*GQRCVGRGQHQ
Trigger: TTGGTGTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR TCA 72 bp TGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTaGCGGCCCAGGTCAGCGATGAGGCCAAAGGTGTGT +
Preference number: 3 (lower is better)
Translates to: WGWHQKAAHWKL*RPRSAMRPKVC
Trigger: ACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CAA 90 bp GCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATGGCTCTGGGCACCCCAGGCCTaGCCTCGAGCTGCAGAGGCC +
Preference number: 3 (lower is better)
Translates to: AANTNKCHKAHRALPQWLWAPQA*PRAAEA
Trigger: GGCCTCTGCAGCTCGAGGCAAGGCCTGGGGTGCCCA...GAGCCATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CAA 90 bp GGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTAGCATACAGCTATCTTaGTCACTTGCCACAAAAGCG +
Preference number: 3 (lower is better)
Translates to: GAGPLEPQAGTGLGTPGLSIQLS*SLATKA
Trigger: CGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCT...AAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CAA 90 bp GTAGGGCACTGGCAATGGCCTTGGCAGGGACATCACAGCAAAACACATGGCACTATGGAGCTGGTCCGCTaGAGCCGCAGGCGGGCACGG +
Preference number: 3 (lower is better)
Translates to: VGHWQWPWQGHHSKTHGTMELVR*SRRRAR
Trigger: CCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCAT...AGTGCCATGTGTTTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CAA 90 bp CATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCCCCGCTTTCGAGGGGTaGCCCCTGCACCGCCAACCC +
Preference number: 3 (lower is better)
Translates to: HGLGDWQCPHIQCLVLLSPAFEG*PLHRQP
Trigger: GGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGGG...GCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CAA 90 bp GACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAATGGAGCTGGTCCGCTaGAGCCGCAGGCGGGCACGG +
Preference number: 3 (lower is better)
Translates to: DPEPTSPAFPDKFRAYGAMELVR*SRRRAR
Trigger: CCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCAT...TGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CAA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCAGCCAGGGTCCTACGTaGTGGTGCAGTGCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTSQGPT*WCSASQ
Trigger: CTGGGAGGCACTGCACCACAACGTAGGACCCTGGCT...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR CAA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGAGCCAGGGTCCTACGTaGTGGTGCAGTGCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKSQGPT*WCSASQ
Trigger: CTGGGAGGCACTGCACCACAACGTAGGACCCTGGCT...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR CAA 90 bp CTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGATGGAGCTGGTCCGCTaGAGCCGCAGGCGGGCACGG +
Preference number: 3 (lower is better)
Translates to: LPQPSQISLGHMEQRGFQMELVR*SRRRAR
Trigger: CCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCAT...CTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR GCA 72 bp AAGTACTGGGGATCAGCATCAGTGGGGATCACAGCCTaGAGCCGGGAGGGAGAAGTAGCTCTTGCTTGGGGG +
Preference number: 3 (lower is better)
Translates to: KYWGSASVGITA*SREGEVALAWG
Trigger: CCCCCAAGCAAGAGCTACTTCTCCCTCCCGGCTGCAGGCTGTGATCCCCACTGATGCTGATCCCCAGTACTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511896.5
3UTR CCA 72 bp CTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTGTGTaGGTCGCGGCCAACACCAATAAATGTCACAAGGCG +
Preference number: 3 (lower is better)
Translates to: LTAQVSDEAKGV*VAANTNKCHKA
Trigger: CGCCTTGTGACATTTATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CAA 90 bp CATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCATCCAGCAGCTCCACTaGCCGTGGCAGGTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: HGLGDWQCPHIQCLVLLSIQQLH*PWQVFR
Trigger: CCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGAT...GCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CAA 90 bp TCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCTCTGACAAGATCATCCAGCAGCTCCACTaGCCGTGGCAGGTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: SGEQQEASPLTSTRSDKIIQQLH*PWQVFR
Trigger: CCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGAT...GATCTTGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR GCA 72 bp CCAACACCAATAAATGTCACAAGGCGCACAGGGCACTaGCACAATGGCTCCTCCTCTGTACTGGCCTCTGCC +
Preference number: 3 (lower is better)
Translates to: PTPINVTRRTGH*HNGSSSVLASA
Trigger: GGCAGAGGCCAGTACAGAGGAGGAGCCATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR CCA 72 bp CAAAAGCGAAGTCCCTGTCACTGTTCCGGAAGCATGTaGGAGCACAGAAGGGAATCAGCCCAGCCTCTCGGA +
Preference number: 3 (lower is better)
Translates to: QKRSPCHCSGSM*EHRRESAQPLG
Trigger: TCCGAGAGGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACAGTGACAGGGACTTCGCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509914.5
3UTR TCA 72 bp AGATGGGGTCTGGGGAGCAGCAAGAGGCATCACCACTaGCCTCTACTCGCTCTGACAAGATCTGGGCACAAA +
Preference number: 3 (lower is better)
Translates to: RWGLGSSKRHHH*PLLALTRSGHK
Trigger: TTTGTGCCCAGATCTTGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGACCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR TCA 72 bp ACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTCTaGGCAGCTTGGCTTACCGCATCCAGCAGCTCCACT +
Preference number: 3 (lower is better)
Translates to: TGSVPIYSASYF*AAWLTASSSST
Trigger: AGTGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR GCA 72 bp CATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTaGCTCGTACTTCTGAGCAGCTTGGCTTACCGCATC +
Preference number: 3 (lower is better)
Translates to: HGLGDWQCPHIQ*LVLLSSLAYRI
Trigger: GATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR CCA 72 bp TGGTTTTCACTCACCTGTCACTGTTCCGGAAGCATGTaGGAGCACAGAAGGGAATCAGCCCAGCCTCTCGGA +
Preference number: 3 (lower is better)
Translates to: WFSLTCHCSGSM*EHRRESAQPLG
Trigger: TCCGAGAGGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACAGTGACAGGTGAGTGAAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511896.5
3UTR-3UTR CAA 90 bp GCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACACCAATAAAAGCTATCTTTGTCACTaGCCACAAAAGCGAAGTCCC +
Preference number: 3 (lower is better)
Translates to: AQVSDEAKGVWVAANTNKSYLCH*PQKRSP
Trigger: GGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCT...TTTATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CAA 90 bp GGAGAGATGGGGTCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCAGCATACAGCTATCTTaGTCACTTGCCACAAAAGCG +
Preference number: 3 (lower is better)
Translates to: GEMGSGEQQEASPLTSTRSIQLS*SLATKA
Trigger: CGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCT...GCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGACCCCATCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CAA 90 bp GCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGAGCTATCTTTGTCACTaGCCACAAAAGCGAAGTCCC +
Preference number: 3 (lower is better)
Translates to: AFPDKFRAYGAERVSAGRSYLCH*PQKRSP
Trigger: GGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCT...CCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR-3UTR CAA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGAGCTATCTTTGTCACTaGCCACAAAAGCGAAGTCCC +
Preference number: 3 (lower is better)
Translates to: AINRRWTRIGGTGREGFKSYLCH*PQKRSP
Trigger: GGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCT...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR TCA 72 bp CAGAGAAGGCTTCAAGGAGTGACAGGCTATAGGCCTTaGGGAATAAAACGGTACAGAGTTAGGCATGGACCC +
Preference number: 3 (lower is better)
Translates to: QRRLQGVTGYRP*GIKRYRVRHGP
Trigger: GGGTCCATGCCTAACTCTGTACCGTTTTATTCCTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
3UTR GCA 72 bp CACATGGCACTTGAGCATACAGCTATCTTTGTCACTTaGCACAAAAGCGAAGTCCCTAGCAGGGGCAGAGAT +
Preference number: 3 (lower is better)
Translates to: HMALEHTAIFVT*HKSEVPSRGRD
Trigger: ATCTCTGCCCCTGCTAGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCTCAAGTGCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511896.5
3UTR GCA 72 bp CACATGGCACTTGAGCATACAGCTATCTTTGTCACTTaGCACAAAAGCGAAGTCCCTGTCACTGTTCCGGAA +
Preference number: 3 (lower is better)
Translates to: HMALEHTAIFVT*HKSEVPVTVPE
Trigger: TTCCGGAACAGTGACAGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCTCAAGTGCCATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR CAA 90 bp TATCTTTGTCACTTGCCACAAAAGCGAAGTCCCTGTCACTGTTCCGGAAGCATGCAAAACACATGGCACTaGAGCATACAGCTATCTTTG +
Preference number: 3 (lower is better)
Translates to: YLCHLPQKRSPCHCSGSMQNTWH*SIQLSL
Trigger: CAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTTG...CATGCTTCCGGAACAGTGACAGGGACTTCGCTTTTGTGGCAAGTGACAAAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
3UTR-3UTR CAA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAACAAAACACATGGCACTaGAGCATACAGCTATCTTTG +
Preference number: 3 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKQNTWH*SIQLSL
Trigger: CAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTTG...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp CCTGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGTGGAGCTGGTCCGCTTaGGCCGCAGGCGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: PGESMELVRLSRRRARAWWSWSA*AAGGHG
Trigger: CCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCA...CCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp CCTGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGAGGCTGGCTCCGGCTaGGGGTCTGGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PGESMELVRLSRRRARAWEAGSG*GSGPAA
Trigger: AGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTC...CCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCGCCCAGAGAGCGGACTaGAAAGCACTTAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: AGPLEPQAGTGLGTPGLAAQRAD*KALSPW
Trigger: CCAGGGGCTAAGTGCTTTGCAGTCCGCTCTCTGGGC...GGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCCAGAGAGCGGACTaGAAAGCACGTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GAGPLEPQAGTGLGTPGLAQRAD*KARAWV
Trigger: GACCCAGGCACGTGCTTTGCAGTCCGCTCTCTGGGC...AAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR CCA 90 bp TGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCGCACCATCTGGAGGCTaGCTCCGGCTGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: WGIHGAGPLEPQAGTGLGAPSGG*LRLRVW
Trigger: CCAGACCCGCAGCCGGAGCCAGCCTCCAGATGGTGC...GCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGGGCAGGGGACCTCCTaGGGAATCCATGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GAGPLEPQAGTGLGTPGLGQGTS*GIHGAG
Trigger: ACCAGCTCCATGGATTCCCCAGGAGGTCCCCTGCCC...AAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp TGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCGCGCACTGGAAGCTCTaGCGGCCCAGGTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: WGIHGAGPLEPQAGTGLGAHWKL*RPRSAM
Trigger: CATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGC...GCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCTCGACTGGCACCAGAAGGCTaGGCACTGGAAGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: VRLSRRRARAWAPQALPRLAPEG*ALEALT
Trigger: CGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAG...TCGAGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCCAGGGTCCTACGTTGTaGTGCAGTGCCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: AGPLEPQAGTGLGTPGLAQGPTL*CSASQS
Trigger: TGACTGGGAGGCACTGCACCACAACGTAGGACCCTG...GGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp GCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCGTTACTCCGGTCCAGTaGACTCTCCAGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: AGPLEPQAGTGLGTPGLAVTPVQ*TLQAGE
Trigger: TTCTCCAGCCTGGAGAGTTCACTGGACCGGAGTAAC...GGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp GAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGTGCCCATGGCCTTGGTaGCTGGCAGTGTCCCCATAT +
Preference number: 4 (lower is better)
Translates to: ELVRLSRRRARAWAPQALCPWPW*LAVSPY
Trigger: ATATGGGGACACTGCCAGTCACCAAGGCCATGGGCA...CAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCATCATCAGCATGTTCTaGCCCTCACCCCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: AGPLEPQAGTGLGTPGLAIISMF*PSPQAP
Trigger: TGGTGCCTGGGGTGAGGGCCAGAACATGCTGATGAT...GGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGTTACTCCGGTCCAGTaGACTCTCCAGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GAGPLEPQAGTGLGTPGLVTPVQ*TLQAGE
Trigger: TTCTCCAGCCTGGAGAGTTCACTGGACCGGAGTAAC...AAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp TGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCAGGCGCACAGGGCACTaGCACAATGGCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: WGIHGAGPLEPQAGTGLGRRTGH*HNGSSS
Trigger: AGAGGAGGAGCCATTGTGGCAGTGCCCTGTGCGCCT...GCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CCCTGCATGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGCTCCGGCTGCGGGTCTaGGCCAGCTGCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: PCMGLAPEGCALEALTAQLRLRV*ASCWIQ
Trigger: CTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAG...CTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCGCCCATGTAGGGCACTaGCAATGGCCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: WGIHGAGPLEPQAGTGLGAHVGH*QWPWQG
Trigger: TCCCTGCCAAGGCCATTGCCAGTGCCCTACATGGGC...GCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCCGCTCTGACAAGATCTaGGCACAAAGCCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: AGPLEPQAGTGLGTPGLARSDKI*AQSPCR
Trigger: CCTACATGGGCTTTGTGCCCAGATCTTGTCAGAGCG...GGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCTCGAGACCTCTACTCGCTCTaGCAAGATCTGGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: VRLSRRRARAWAPQALPRDLYSL*QDLGTK
Trigger: CTTTGTGCCCAGATCTTGTCAGAGCGAGTAGAGGTC...TCGAGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp CAGCTTGGCTTACCGCATCCAGCAGCTCCACTTGCCGTGGCAGGTCTTCAGGAGTGGAGCTGGTCCGCTTaGGCCGCAGGCGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: QLGLPHPAAPLAVAGLQEWSWSA*AAGGHG
Trigger: CCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCA...CTCCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCGGGTCTGGGCCAGCTaGTGGATACAGTTATTGACT +
Preference number: 4 (lower is better)
Translates to: ELVRLSRRRARAWAPQALRVWAS*WIQLLT
Trigger: AGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCG...CAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCGGTCCTACGTTGTGGTaGAGTGCCTCCCAGTCATCC +
Preference number: 4 (lower is better)
Translates to: ESMELVRLSRRRARAWAPGPTLW*SASQSS
Trigger: GGATGACTGGGAGGCACTGCACCACAACGTAGGACC...GGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGTGAACTCTCCAGGCTaGAGAAGGATCTCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: GAGPLEPQAGTGLGTPGLVNSPG*RRISLW
Trigger: CCAAAGGGAGATCCTTCTCCAGCCTGGAGAGTTCAC...AAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCTCGAGTGAACTCTCCAGGCTaGAGAAGGATCTCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: VRLSRRRARAWAPQALPRVNSPG*RRISLW
Trigger: CCAAAGGGAGATCCTTCTCCAGCCTGGAGAGTTCAC...TCGAGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp CCCTGCATGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGGGGCAGGGGACCTCCTaGGGAATCCATGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PCMGLAPEGCALEALTAQGQGTS*GIHGAG
Trigger: ACCAGCTCCATGGATTCCCCAGGAGGTCCCCTGCCC...CTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp TCTGGGCACAAAGCCCATGTAGGGCACTGGCAATGGCCTTGGCAGGGACATCACTGGAGCTGGTCCGCTTaGGCCGCAGGCGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: SGHKAHVGHWQWPWQGHHWSWSA*AAGGHG
Trigger: CCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCA...GTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTACATGGGCTTTGTGCCCAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACTCCCCTCCGTTCCCGTaGCTGGGTCCTCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: ALTAQVSDEAKGVWVAANSPPFP*LGPLHL
Trigger: GAGATGCAGAGGACCCAGGCACGGGAACGGAGGGGA...GTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGGAGGCTGGCTCCGGCTaGGGGTCTGGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGAREAGSG*GSGPAA
Trigger: AGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTC...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp CAGCTTGGCTTACCGCATCCAGCAGCTCCACTTGCCGTGGCAGGTCTTCAGGAGGAGGCTGGCTCCGGCTaGGGGTCTGGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLGLPHPAAPLAVAGLQEEAGSG*GSGPAA
Trigger: AGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTC...CTCCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp CCCTGCATGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGCTGGCACCAGAAGGCTaGGCACTGGAAGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: PCMGLAPEGCALEALTAQLAPEG*ALEALT
Trigger: CGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAG...CTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CTGCATGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGGTGTTGGGCGCTGCCACTaGGTGCTACCGCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: LHGAGTRRLRTGSSDGPGVGRCH*VLPLGT
Trigger: TGTACCCAGCGGTAGCACCCAGTGGCAGCGCCCAAC...ACCTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTACCCCAGGCACCATCTaGAGGCTGGCTCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: EGCALEALTAQVSDEAKGTPGTI*RLAPAA
Trigger: CGCAGCCGGAGCCAGCCTCCAGATGGTGCCTGGGGT...ACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCATCATCAGCATGTTCTaGCCCTCACCCCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: ESMELVRLSRRRARAWAPIISMF*PSPQAP
Trigger: TGGTGCCTGGGGTGAGGGCCAGAACATGCTGATGAT...GGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CCTGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGATGTGCACCAGAGGCTaGCAGTGGATCAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: PGESMELVRLSRRRARAWMCTRG*QWIRLW
Trigger: CCACAGTCTGATCCACTGCCAGCCTCTGGTGCACAT...CCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGTGTTCCGGAAGCATGTaGGAGCACAGAAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: ELVRLSRRRARAWAPQALCSGSM*EHRRES
Trigger: TGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACA...CAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCTGGAGCTGGTCCGCTTaGGCCGCAGGCGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTWSWSA*AAGGHG
Trigger: CCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCA...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp CAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGACTCCCCGCCAGCCTCTaGCGGCCCGCACTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: QLSRVGQGQGTQGPKERGLPASL*RPALSA
Trigger: GGCTGAGAGTGCGGGCCGGCAGAGGCTGGCGGGGAG...TCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000509914.5
CDS-3UTR GCA 90 bp CCCTGCATGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGACTGCTCTTCCCCGGTaGCAGGTCCTCTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: PCMGLAPEGCALEALTAQTALPR*QVLFRY
Trigger: GTACCTGAAGAGGACCTGGCACCGGGGAAGAGCAGT...CTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCGGGTCTGGGCCAGCTaGTGGATACAGTTATTGACT +
Preference number: 4 (lower is better)
Translates to: ESMELVRLSRRRARAWAPRVWAS*WIQLLT
Trigger: AGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCG...GGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCGGGAGAAGTAGCTCTTaGTTGGGGGATGTAGGCATC +
Preference number: 4 (lower is better)
Translates to: ESMELVRLSRRRARAWAPGRSSS*LGDVGI
Trigger: GATGCCTACATCCCCCAAGCAAGAGCTACTTCTCCC...GGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR CCA 90 bp CCGGAAGCATGTGGGAGCACAGAAGGGAATCAGCCCAGCCTCTCGGACTCTCCCGCCCAGCGCGACCTCTaGAGCTACTGCGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PEACGSTEGNQPSLSDSPAQRDL*SYCACK
Trigger: CTTGCAGGCGCAGTAGCTCCAGAGGTCGCGCTGGGC...GGGAGAGTCCGAGAGGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CCTGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGACTGGGTGCTACCGCTaGGTACATGCCAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: PGESMELVRLSRRRARAWTGCYR*VHASSK
Trigger: CTTACTACTGGCATGTACCCAGCGGTAGCACCCAGT...CCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CAGCTTGGCTTACCGCATCCAGCAGCTCCACTTGCCGTGGCAGGTCTTCAGGAGGCACCATCTGGAGGCTaGCTCCGGCTGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QLGLPHPAAPLAVAGLQEAPSGG*LRLRVW
Trigger: CCAGACCCGCAGCCGGAGCCAGCCTCCAGATGGTGC...CTCCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGCCCTGTCACGGCCCTTaGAGCTCCCCACGCCCCACA +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGARPCHGP*SSPRPT
Trigger: TGTGGGGCGTGGGGAGCTCCAAGGGCCGTGACAGGG...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR CCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGAGGCGGGCACGGGCCTaGGCACCCCAGGCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKRRARA*APQALP
Trigger: AGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCT...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp AGTCATGAGAGAGTCAGACACACTGAGCATGGTGGGGACCCAGGCATTCCGGTCAGGCGGGCACGGGCCTaGGCACCCCAGGCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SHERVRHTEHGGDPGIPVRRARA*APQALP
Trigger: AGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCT...GACCGGAATGCCTGGGTCCCCACCATGCTCAGTGTGTCTGACTCTCTCATGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CCGGAAGCATGTGGGAGCACAGAAGGGAATCAGCCCAGCCTCTCGGACTCTCCCATCCTCACCGGCCCTTaGAGCTCCCCACGCCCCACA +
Preference number: 4 (lower is better)
Translates to: PEACGSTEGNQPSLSDSPILTGP*SSPRPT
Trigger: TGTGGGGCGTGGGGAGCTCCAAGGGCCGGTGAGGAT...GGGAGAGTCCGAGAGGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR TCA 90 bp CCCTGCATGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGAGTGCCTCGTACTTCTaGGCAGCTTGGCTTACCGCA +
Preference number: 4 (lower is better)
Translates to: PCMGLAPEGCALEALTAQSASYF*AAWLTA
Trigger: TGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACT...CTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp TCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCTCTGACAAGATCTGGAGCTGGTCCGCTTaGGCCGCAGGCGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: SGEQQEASPLTSTRSDKIWSWSA*AAGGHG
Trigger: CCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCA...GATCTTGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGACAGGCTATAGGCCTTaGGGAATAAAACGGTACAGA +
Preference number: 4 (lower is better)
Translates to: ELVRLSRRRARAWAPQALTGYRP*GIKRYR
Trigger: TCTGTACCGTTTTATTCCTCAAGGCCTATAGCCTGT...CAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp TGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGACACCCCGCCTCCCCGCCAGCCTCTaGCGGCCCGCACTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WSREGFSRKASRKEKTPRLPASL*RPALSA
Trigger: GGCTGAGAGTGCGGGCCGGCAGAGGCTGGCGGGGAG...GCGGGGTGTCTTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GTAGGGCACTGGCAATGGCCTTGGCAGGGACATCACAGCAAAACACATGGCACTCTCCCCGCCAGCCTCTaGCGGCCCGCACTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VGHWQWPWQGHHSKTHGTLPASL*RPALSA
Trigger: GGCTGAGAGTGCGGGCCGGCAGAGGCTGGCGGGGAG...AGTGCCATGTGTTTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GAGCACAGAAGGGAATCAGCCCAGCCTCTCGGACTCTCCCCAAACTGTCCCTGCTCCCAGGTTGGGCGCTaGCACTGGGTGCTACCGCTG +
Preference number: 4 (lower is better)
Translates to: EHRRESAQPLGLSPNCPCSQVGR*HWVLPL
Trigger: CAGCGGTAGCACCCAGTGGCAGCGCCCAACCTGGGA...GCAGGGACAGTTTGGGGAGAGTCCGAGAGGCTGGGCTGATTCCCTTCTGTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGATACAGTTATTGACTaGAATACTGCTCTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: GAGPLEPQAGTGLGTPGLDTVID*NTALPR
Trigger: CCGGGGAAGAGCAGTATTGCAGTCAATAACTGTATC...AAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGAGGCTGGCTCCGGCTaGGGGTCTGGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKEAGSG*GSGPAA
Trigger: AGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTC...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp CCCTGCATGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGACCATACAGGCAGCCTaGACAGCTTCAGAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PCMGLAPEGCALEALTAQTIQAA*TASESP
Trigger: GGGACTCTCTGAAGCTGTGCAGGCTGCCTGTATGGT...CTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACGGCCTTGCCTCGAGCTaGAGAGGCCACAAGACACTT +
Preference number: 4 (lower is better)
Translates to: ALTAQVSDEAKGVWVAANGLASS*RGHKTL
Trigger: AAGTGTCTTGTGGCCTCTGCAGCTCGAGGCAAGGCC...GTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGCTGCGGGGCCAGCTaGCGCCGCACAAATACGGGG +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKGCGAS*RRTNTG
Trigger: CCCCGTATTTGTGCGGCGCCAGCTGGCCCCGCAGCC...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR CCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGCTCCGGCTGCGGGTCTaGGCCAGCTGCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGARLRLRV*ASCWIQ
Trigger: CTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAG...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp CCCTGTCACTGTTCCGGAAGCATGTGGGAGCACAGAAGGGAATCAGCCCAGCCTACCCCAGGCACCATCTaGAGGCTGGCTCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: PCHCSGSMWEHRRESAQPTPGTI*RLAPAA
Trigger: CGCAGCCGGAGCCAGCCTCCAGATGGTGCCTGGGGT...AGGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACAGTGACAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509914.5
CDS-3UTR CCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAAGGCGGGCACGGGCCTaGGCACCCCAGGCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRRRARA*APQALP
Trigger: AGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCT...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCTCTGACAAGATCAGGCGGGCACGGGCCTaGGCACCCCAGGCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: SGEQQEASPLTSTRSDKIRRARA*APQALP
Trigger: AGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCT...GATCTTGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGGGCCCAGGTCAGCGATaGGGCCAAAGGTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGARGPGQR*GQRCVG
Trigger: ACCCACACACCTTTGGCCTCATCGCTGACCTGGGCC...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GTCACTGTTCCGGAAGCATGTGGGAGCACAGAAGGGAATCAGCCCAGCCTCTCGGGCGCTGCCACTGGGTaGTACCGCTGGGTACATGCC +
Preference number: 4 (lower is better)
Translates to: VTVPEACGSTEGNQPSLSGAATG*YRWVHA
Trigger: GGCATGTACCCAGCGGTAGCACCCAGTGGCAGCGCC...CGAGAGGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACAGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGTCCCCTCCGTTCCCGTaGCTGGGTCCTCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGARSPPFP*LGPLHL
Trigger: GAGATGCAGAGGACCCAGGCACGGGAACGGAGGGGA...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGGAGGCTGGCTCCGGCTaGGGGTCTGGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKEAGSG*GSGPAA
Trigger: AGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTC...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGCCGCTTTCGAGGGGTTaGCCCTGCACCGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKPLSRG*PCTANP
Trigger: GGGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGG...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp CACCTGTCACTGTTCCGGAAGCATGTGGGAGCACAGAAGGGAATCAGCCCAGCCGCCCAGCGCGACCTCTaGAGCTACTGCGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: HLSLFRKHVGAQKGISPAAQRDL*SYCACK
Trigger: CTTGCAGGCGCAGTAGCTCCAGAGGTCGCGCTGGGC...GGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACAGTGACAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR CCA 90 bp GCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACGTACCTGCAGCATCGTaGATCTTCCTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ALTAQVSDEAKGVWVAANVPAAS*IFLQPG
Trigger: TCCTGGCTGGAGGAAGATCCACGATGCTGCAGGTAC...GTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCACCATCTGGAGGCTaGCTCCGGCTGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QLSRVGQGQGTQGPKERGAPSGG*LRLRVW
Trigger: CCAGACCCGCAGCCGGAGCCAGCCTCCAGATGGTGC...TCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp CAGCACATCCATGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCGCACCATCTGGAGGCTaGCTCCGGCTGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: QHIHAHGLGDWQCPHIQCAPSGG*LRLRVW
Trigger: CCAGACCCGCAGCCGGAGCCAGCCTCCAGATGGTGC...GCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCATGGATGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGACCCCAGGCACCATCTaGAGGCTGGCTCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGETPGTI*RLAPAA
Trigger: CGCAGCCGGAGCCAGCCTCCAGATGGTGCCTGGGGT...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAACCCCAGGCACCATCTaGAGGCTGGCTCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: VEPTVQGWTGARNTRTQGTPGTI*RLAPAA
Trigger: CGCAGCCGGAGCCAGCCTCCAGATGGTGCCTGGGGT...TCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGACCCCAGGCACCATCTaGAGGCTGGCTCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKTPGTI*RLAPAA
Trigger: CGCAGCCGGAGCCAGCCTCCAGATGGTGCCTGGGGT...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGACCCCCTGCATGGGGCTaGCACCAGAAGGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: VEPTVQGWTGARNTRTQGPPAWG*HQKAAH
Trigger: GTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGGGG...TCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAGGCGGGCACGGGCCTaGGCACCCCAGGCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNRRARA*APQALP
Trigger: AGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCT...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp GGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTAAAACACATGGCACTTaGGCATACAGCTATCTTTGT +
Preference number: 4 (lower is better)
Translates to: GAGPLEPQAGTGLGTPGLKTHGT*AYSYLC
Trigger: ACAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTT...AAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACGACCTCTACTCGCTCTaGCAAGATCTGGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: ALTAQVSDEAKGVWVAANDLYSL*QDLGTK
Trigger: CTTTGTGCCCAGATCTTGTCAGAGCGAGTAGAGGTC...GTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTTGCCCATGGCCTTGGTaGCTGGCAGTGTCCCCATAT +
Preference number: 4 (lower is better)
Translates to: EGCALEALTAQVSDEAKGCPWPW*LAVSPY
Trigger: ATATGGGGACACTGCCAGTCACCAAGGCCATGGGCA...ACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAGCTCCACTTGCCGACCTCTGGAGCTACTaGGCCTGCAAGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VPRTSEQLGLPHPAAPLADLWSY*ACKPSL
Trigger: GAGGCTGGGCTTGCAGGCGCAGTAGCTCCAGAGGTC...GGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR GCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGCGCTGCCACTGGGTaGTACCGCTGGGTACATGCC +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKGAATG*YRWVHA
Trigger: GGCATGTACCCAGCGGTAGCACCCAGTGGCAGCGCC...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGGGCGCTGCCACTGGGTaGTACCGCTGGGTACATGCC +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEGAATG*YRWVHA
Trigger: GGCATGTACCCAGCGGTAGCACCCAGTGGCAGCGCC...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp CAGCACATCCATGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCGGCGCTGCCACTGGGTaGTACCGCTGGGTACATGCC +
Preference number: 4 (lower is better)
Translates to: QHIHAHGLGDWQCPHIQCGAATG*YRWVHA
Trigger: GGCATGTACCCAGCGGTAGCACCCAGTGGCAGCGCC...GCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCATGGATGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GGGTCGCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATGGCGCTGCCACTGGGTaGTACCGCTGGGTACATGCC +
Preference number: 4 (lower is better)
Translates to: GSRPTPINVTRRTGHCHNGAATG*YRWVHA
Trigger: GGCATGTACCCAGCGGTAGCACCCAGTGGCAGCGCC...ATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGCGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGATCCCAGGTTGGGCGCTaGCACTGGGTGCTACCGCTG +
Preference number: 4 (lower is better)
Translates to: VEPTVQGWTGARNTRTQGSQVGR*HWVLPL
Trigger: CAGCGGTAGCACCCAGTGGCAGCGCCCAACCTGGGA...TCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGTCCCAGGTTGGGCGCTaGCACTGGGTGCTACCGCTG +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKSQVGR*HWVLPL
Trigger: CAGCGGTAGCACCCAGTGGCAGCGCCCAACCTGGGA...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATGAGGCTGGCTCCGGCTaGGGGTCTGGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNEAGSG*GSGPAA
Trigger: AGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTC...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GTTCAAGTACTGGGGATCAGCATCAGTGGGGATCACAGCCTGCAGCCGGGAGGGAGGCGCACAGGGCACTaGCACAATGGCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VQVLGISISGDHSLQPGGRRTGH*HNGSSS
Trigger: AGAGGAGGAGCCATTGTGGCAGTGCCCTGTGCGCCT...CCCTCCCGGCTGCAGGCTGTGATCCCCACTGATGCTGATCCCCAGTACTTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGGCGTGTTTCCGTGTGTaGGTCCGGGGGAGGCCCACG +
Preference number: 4 (lower is better)
Translates to: VTEVEPTVQGWTGARNTRACFRV*VRGRPT
Trigger: CGTGGGCCTCCCCCGGACCCACACACGGAAACACGC...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR CCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGGCCCAGCGCGACCTCTaGAGCTACTGCGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEAQRDL*SYCACK
Trigger: CTTGCAGGCGCAGTAGCTCCAGAGGTCGCGCTGGGC...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000509914.5
CDS-3UTR CCA 90 bp CAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCCAGCGCGACCTCTaGAGCTACTGCGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: QLSRVGQGQGTQGPKERGAQRDL*SYCACK
Trigger: CTTGCAGGCGCAGTAGCTCCAGAGGTCGCGCTGGGC...TCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000509914.5
CDS-3UTR CCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAGCACCATCTGGAGGCTaGCTCCGGCTGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRAPSGG*LRLRVW
Trigger: CCAGACCCGCAGCCGGAGCCAGCCTCCAGATGGTGC...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGACCCCAGGCACCATCTaGAGGCTGGCTCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKTPGTI*RLAPAA
Trigger: CGCAGCCGGAGCCAGCCTCCAGATGGTGCCTGGGGT...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CCTGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGATTCACTAGGCTCATaGCATCCTTCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: PGESMELVRLSRRRARAWDSLGS*HPSSGS
Trigger: TGATCCTGAAGAAGGATGCCATGAGCCTAGTGAATC...CCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACCACTGGCAATGGCCTTaGCAGGGACATCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: ALTAQVSDEAKGVWVAANHWQWP*QGHHSK
Trigger: TTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTG...GTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGCCCCCTGCATGGGGCTaGCACCAGAAGGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKPPAWG*HQKAAH
Trigger: GTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGGGG...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGACCCCCTGCATGGGGCTaGCACCAGAAGGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRPPAWG*HQKAAH
Trigger: GTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGGGG...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACACCAATAAAGGGCAGGGGACCTCCTaGGGAATCCATGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: AQVSDEAKGVWVAANTNKGQGTS*GIHGAG
Trigger: ACCAGCTCCATGGATTCCCCAGGAGGTCCCCTGCCC...TTTATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGTGCCCATGGCCTTGGTaGCTGGCAGTGTCCCCATAT +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGARCPWPW*LAVSPY
Trigger: ATATGGGGACACTGCCAGTCACCAAGGCCATGGGCA...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGGGCCCAGGTCAGCGATaGGGCCAAAGGTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEGPGQR*GQRCVG
Trigger: ACCCACACACCTTTGGCCTCATCGCTGACCTGGGCC...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp AGTCATGAGAGAGTCAGACACACTGAGCATGGTGGGGACCCAGGCATTCCGGTCGGCCCAGGTCAGCGATaGGGCCAAAGGTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SHERVRHTEHGGDPGIPVGPGQR*GQRCVG
Trigger: ACCCACACACCTTTGGCCTCATCGCTGACCTGGGCC...GACCGGAATGCCTGGGTCCCCACCATGCTCAGTGTGTCTGACTCTCTCATGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAGCGCACTGGAAGCTCTaGCGGCCCAGGTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRAHWKL*RPRSAM
Trigger: CATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGC...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATGGAGCTGGTCCGCTTaGGCCGCAGGCGGGCACGGG +
Preference number: 4 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKWSWSA*AAGGHG
Trigger: CCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCA...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGACCTCTGGAGCTACTaGGCCTGCAAGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKDLWSY*ACKPSL
Trigger: GAGGCTGGGCTTGCAGGCGCAGTAGCTCCAGAGGTC...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR GCA 90 bp CATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCTCCCAGGTTGGGCGCTaGCACTGGGTGCTACCGCTG +
Preference number: 4 (lower is better)
Translates to: HGLGDWQCPHIQCLVLLSSQVGR*HWVLPL
Trigger: CAGCGGTAGCACCCAGTGGCAGCGCCCAACCTGGGA...GCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTCCCAGGTTGGGCGCTaGCACTGGGTGCTACCGCTG +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKSQVGR*HWVLPL
Trigger: CAGCGGTAGCACCCAGTGGCAGCGCCCAACCTGGGA...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGTCCCCTCCGTTCCCGTaGCTGGGTCCTCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGESPPFP*LGPLHL
Trigger: GAGATGCAGAGGACCCAGGCACGGGAACGGAGGGGA...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGACTGCTCTTCCCCGGTaGCAGGTCCTCTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGARTALPR*QVLFRY
Trigger: GTACCTGAAGAGGACCTGGCACCGGGGAAGAGCAGT...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp TACCTGGTTTTCACTCACCTGTCACTGTTCCGGAAGCATGTGGGAGCACAGAAGGAGGCTGGCTCCGGCTaGGGGTCTGGGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: YLVFTHLSLFRKHVGAQKEAGSG*GSGPAA
Trigger: AGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTC...CTTCTGTGCTCCCACATGCTTCCGGAACAGTGACAGGTGAGTGAAAACCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR GCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCCCCACACACGGATGTaGACCAGAGGCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTPHTRM*TRGWQW
Trigger: CCACTGCCAGCCTCTGGTGCACATCCGTGTGTGGGG...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
CDS-3UTR GCA 90 bp GCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACTGTCCCCATATACAGTaGCTCGTACTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: ALTAQVSDEAKGVWVAANCPHIQ*LVLLSS
Trigger: GCTGCTCAGAAGTACGAGGCACTGTATATGGGGACA...GTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GGATCAGCATCAGTGGGGATCACAGCCTGCAGCCGGGAGGGAGAAGTAGCTCTTCTGGCACCAGAAGGCTaGGCACTGGAAGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: GSASVGITACSREGEVALLAPEG*ALEALT
Trigger: CGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAG...AAGAGCTACTTCTCCCTCCCGGCTGCAGGCTGTGATCCCCACTGATGCTGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR GCA 90 bp CCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCCCGCTTTCGAGGGGTTaGCCCTGCACCGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: PSQISLGHMEQRGFQPEGPLSRG*PCTANP
Trigger: GGGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGG...GCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGCGTGTTTCCGTGTGTaGGTCCGGGGGAGGCCCACG +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPACFRV*VRGRPT
Trigger: CGTGGGCCTCCCCCGGACCCACACACGGAAACACGC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR CCA 90 bp CCGGAAGCATGTGGGAGCACAGAAGGGAATCAGCCCAGCCTCTCGGACTCTCCCGTACCTGCAGCATCGTaGATCTTCCTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PEACGSTEGNQPSLSDSPVPAAS*IFLQPG
Trigger: TCCTGGCTGGAGGAAGATCCACGATGCTGCAGGTAC...GGGAGAGTCCGAGAGGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGACTCCGGCTGCGGGTCTaGGCCAGCTGCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRLRLRV*ASCWIQ
Trigger: CTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAG...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCCCCTGTCACGGCCCTTaGAGCTCCCCACGCCCCACA +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFPCHGP*SSPRPT
Trigger: TGTGGGGCGTGGGGAGCTCCAAGGGCCGTGACAGGG...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR CCA 90 bp TCCCCATATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCACCCCCTGCATGGGGCTaGCACCAGAAGGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: SPYTVPRTSEQLGLPHPAPPAWG*HQKAAH
Trigger: GTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGGGG...TGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCACCCCCTGCATGGGGCTaGCACCAGAAGGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: LGMDPEPTSPAFPDKFRAPPAWG*HQKAAH
Trigger: GTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGGGG...TGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAGGGCAGGGGACCTCCTaGGGAATCCATGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VEPTVQGWTGARNTRTQGGQGTS*GIHGAG
Trigger: ACCAGCTCCATGGATTCCCCAGGAGGTCCCCTGCCC...TCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATGGCTGTCACGGCCCTTaGAGCTCCCCACGCCCCACA +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNGCHGP*SSPRPT
Trigger: TGTGGGGCGTGGGGAGCTCCAAGGGCCGTGACAGCC...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354402.9
CDS-3UTR CCA 90 bp GGAGAGATGGGGTCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCGGGCAGAGATGGGGCTaGGGTAGAAGCTGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: GEMGSGEQQEASPLTSTRGQRWG*GRSWLE
Trigger: CTCTAACCAGCTTCTACCCCAGCCCCATCTCTGCCC...GCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGACCCCATCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR TCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGACGCCAGCGAAACCGCTaGCACCACCGCCCAACTATG +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRRQRNR*HHRPTM
Trigger: CATAGTTGGGCGGTGGTGTCAGCGGTTTCGCTGGCG...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR TCA 90 bp CCTGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGAAAACACATGGCACTTaGGCATACAGCTATCTTTGT +
Preference number: 4 (lower is better)
Translates to: PGESMELVRLSRRRARAWKTHGT*AYSYLC
Trigger: ACAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTT...CCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCGCGCACTGGAAGCTCTaGCGGCCCAGGTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFAHWKL*RPRSAM
Trigger: CATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGC...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATGGAGCTACTGCGCCTaGAAGCCCAGCCTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRWSYCA*KPSLSA
Trigger: CGCAGAGAGGCTGGGCTTGCAGGCGCAGTAGCTCCA...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000511896.5
CDS-3UTR GCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGGCGCTGCCACTGGGTaGTACCGCTGGGTACATGCC +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPGAATG*YRWVHA
Trigger: GGCATGTACCCAGCGGTAGCACCCAGTGGCAGCGCC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGGGCGCTGCCACTGGGTaGTACCGCTGGGTACATGCC +
Preference number: 4 (lower is better)
Translates to: AFPDKFRAYGAERVSAGRGAATG*YRWVHA
Trigger: GGCATGTACCCAGCGGTAGCACCCAGTGGCAGCGCC...CCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCTCCCAGGTTGGGCGCTaGCACTGGGTGCTACCGCTG +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFSQVGR*HWVLPL
Trigger: CAGCGGTAGCACCCAGTGGCAGCGCCCAACCTGGGA...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGTCCCCTCCGTTCCCGTaGCTGGGTCCTCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: VTEVEPTVQGWTGARNTRSPPFP*LGPLHL
Trigger: GAGATGCAGAGGACCCAGGCACGGGAACGGAGGGGA...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCGCCCAGAGAGCGGACTaGAAAGCACTTAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTAQRAD*KALSPW
Trigger: CCAGGGGCTAAGTGCTTTGCAGTCCGCTCTCTGGGC...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp CAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCCAGAGAGCGGACTaGAAAGCACTTAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: QLSRVGQGQGTQGPKERGAQRAD*KALSPW
Trigger: CCAGGGGCTAAGTGCTTTGCAGTCCGCTCTCTGGGC...TCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAGCTCCACTTGCCACTGCTCTTCCCCGGTaGCAGGTCCTCTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: VPRTSEQLGLPHPAAPLATALPR*QVLFRY
Trigger: GTACCTGAAGAGGACCTGGCACCGGGGAAGAGCAGT...GGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp CCCTGCATGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGGATACAGTTATTGACTaGAATACTGCTCTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: PCMGLAPEGCALEALTAQDTVID*NTALPR
Trigger: CCGGGGAAGAGCAGTATTGCAGTCAATAACTGTATC...CTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGCCCCACACACGGATGTaGACCAGAGGCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKPHTRM*TRGWQW
Trigger: CCACTGCCAGCCTCTGGTGCACATCCGTGTGTGGGG...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000511896.5
CDS-3UTR GCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCAGGCGCACAGGGCACTaGCACAATGGCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTRRTGH*HNGSSS
Trigger: AGAGGAGGAGCCATTGTGGCAGTGCCCTGTGCGCCT...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp CAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAAGGCGCACAGGGCACTaGCACAATGGCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QLSRVGQGQGTQGPKERGRRTGH*HNGSSS
Trigger: AGAGGAGGAGCCATTGTGGCAGTGCCCTGTGCGCCT...TCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGACCATACAGGCAGCCTaGACAGCTTCAGAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGARTIQAA*TASESP
Trigger: GGGACTCTCTGAAGCTGTGCAGGCTGCCTGTATGGT...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGCCGCTTTCGAGGGGTTaGCCCTGCACCGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: AINRRWTRIGGTGREGFKPLSRG*PCTANP
Trigger: GGGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGG...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGGTTGGGCGCTGCCACTaGGTGCTACCGCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: VTEVEPTVQGWTGARNTRVGRCH*VLPLGT
Trigger: TGTACCCAGCGGTAGCACCCAGTGGCAGCGCCCAAC...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGGTTGGGCGCTGCCACTaGGTGCTACCGCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKVGRCH*VLPLGT
Trigger: TGTACCCAGCGGTAGCACCCAGTGGCAGCGCCCAAC...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGAGAAGGATCTCCCTTTaGGGGGCCGCAGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKRRISL*GAAVPR
Trigger: TCTGGGGACTGCGGCCCCCCAAAGGGAGATCCTTCT...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCCTCCGGCTGCGGGTCTaGGCCAGCTGCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFLRLRV*ASCWIQ
Trigger: CTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAG...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCTCCGGCTGCGGGTCTaGGCCAGCTGCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: AVSPYTVPRTSEQLGLPHLRLRV*ASCWIQ
Trigger: CTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAG...ATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGACACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAGCTCCACTCCGGCTGCGGGTCTaGGCCAGCTGCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: YTVPRTSEQLGLPHPAAPLRLRV*ASCWIQ
Trigger: CTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAG...TGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GGAGAGATGGGGTCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCATCATCAGCATGTTCTaGCCCTCACCCCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: GEMGSGEQQEASPLTSTRIISMF*PSPQAP
Trigger: TGGTGCCTGGGGTGAGGGCCAGAACATGCTGATGAT...GCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGACCCCATCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCGCCCATGTAGGGCACTaGCAATGGCCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTAHVGH*QWPWQG
Trigger: TCCCTGCCAAGGCCATTGCCAGTGCCCTACATGGGC...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp TTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAAGGCGGGCACGGGCCTaGGCACCCCAGGCCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LGHMEQRGFQPEGIKKRERRARA*APQALP
Trigger: AGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCT...TTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCAGAGGATCGGCCCTTaGAGCTCCCCACGCCCCACA +
Preference number: 4 (lower is better)
Translates to: AFPDKFRAYGAERVSAGRQRIGP*SSPRPT
Trigger: TGTGGGGCGTGGGGAGCTCCAAGGGCCGATCCTCTG...CCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467078.5
CDS-3UTR TCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGAAGAGGCATCACCACTaGCCTCTACTCGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGARKRHHH*PLLALT
Trigger: TGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTT...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp CAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGATGCCCATGGCCTTGGTaGCTGGCAGTGTCCCCATAT +
Preference number: 4 (lower is better)
Translates to: QLSRVGQGQGTQGPKERGCPWPW*LAVSPY
Trigger: ATATGGGGACACTGCCAGTCACCAAGGCCATGGGCA...TCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp CCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCGGCCCAGGTCAGCGATaGGGCCAAAGGTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: PSQISLGHMEQRGFQPEGGPGQR*GQRCVG
Trigger: ACCCACACACCTTTGGCCTCATCGCTGACCTGGGCC...GCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGGCCCAGGTCAGCGATaGGGCCAAAGGTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPGPGQR*GQRCVG
Trigger: ACCCACACACCTTTGGCCTCATCGCTGACCTGGGCC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGAGACACTTCTGGTACTaGACCATACAGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGARRHFWY*TIQAAC
Trigger: GCAGGCTGCCTGTATGGTTCAGTACCAGAAGTGTCT...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGGAAGGCTTCAAGGAGTaGCAGGCTATAGGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGAREGFKE*QAIGLE
Trigger: CTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTC...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGGAGAGTCAGACACACTaGGCATGGTGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKESQTH*AWWGPR
Trigger: CCTGGGTCCCCACCATGCTCAGTGTGTCTGACTCTC...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp TCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCTCTGACAAGATCGAGAGTCAGACACACTaGGCATGGTGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: SGEQQEASPLTSTRSDKIESQTH*AWWGPR
Trigger: CCTGGGTCCCCACCATGCTCAGTGTGTCTGACTCTC...GATCTTGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp TTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATGGAGCTACTGCGCCTaGAAGCCCAGCCTCTCTGCG +
Preference number: 4 (lower is better)
Translates to: LGMDPEPTSPAFPDKFRAWSYCA*KPSLSA
Trigger: CGCAGAGAGGCTGGGCTTGCAGGCGCAGTAGCTCCA...TGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358580.9
ENST00000511896.5
CDS-3UTR GCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCGACCTCTGGAGCTACTaGGCCTGCAAGCCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFDLWSY*ACKPSL
Trigger: GAGGCTGGGCTTGCAGGCGCAGTAGCTCCAGAGGTC...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000511896.5
CDS-3UTR GCA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGTCCCAGGTTGGGCGCTaGCACTGGGTGCTACCGCTG +
Preference number: 4 (lower is better)
Translates to: AINRRWTRIGGTGREGFKSQVGR*HWVLPL
Trigger: CAGCGGTAGCACCCAGTGGCAGCGCCCAACCTGGGA...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCATCCCCTCCGTTCCCGTaGCTGGGTCCTCTGCATCTC +
Preference number: 4 (lower is better)
Translates to: DPEPTSPAFPDKFRAYGASPPFP*LGPLHL
Trigger: GAGATGCAGAGGACCCAGGCACGGGAACGGAGGGGA...TGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAGCCCAGAGAGCGGACTaGAAAGCACTTAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRAQRAD*KALSPW
Trigger: CCAGGGGCTAAGTGCTTTGCAGTCCGCTCTCTGGGC...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp CATGTAGGGCACTGGCAATGGCCTTGGCAGGGACATCACAGCAAAACACATGGCGCCCAGAGAGCGGACTaGAAAGCACTTAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: HVGHWQWPWQGHHSKTHGAQRAD*KALSPW
Trigger: CCAGGGGCTAAGTGCTTTGCAGTCCGCTCTCTGGGC...GCCATGTGTTTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGACTGCTCTTCCCCGGTaGCAGGTCCTCTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKTALPR*QVLFRY
Trigger: GTACCTGAAGAGGACCTGGCACCGGGGAAGAGCAGT...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCCCCCACACACGGATGTaGACCAGAGGCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPPHTRM*TRGWQW
Trigger: CCACTGCCAGCCTCTGGTGCACATCCGTGTGTGGGG...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCCCACACACGGATGTaGACCAGAGGCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: AVSPYTVPRTSEQLGLPHPHTRM*TRGWQW
Trigger: CCACTGCCAGCCTCTGGTGCACATCCGTGTGTGGGG...ATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGACACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACGCTATCTTTGTCACTTaGCACAAAAGCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: ALTAQVSDEAKGVWVAANAIFVT*HKSEVP
Trigger: AGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC...GTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAAGGCGCACAGGGCACTaGCACAATGGCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRRRTGH*HNGSSS
Trigger: AGAGGAGGAGCCATTGTGGCAGTGCCCTGTGCGCCT...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp TCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCTCTGACAAGATCAGGCGCACAGGGCACTaGCACAATGGCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SGEQQEASPLTSTRSDKIRRTGH*HNGSSS
Trigger: AGAGGAGGAGCCATTGTGGCAGTGCCCTGTGCGCCT...GATCTTGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGCTGGCACCAGAAGGCTaGGCACTGGAAGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: VTEVEPTVQGWTGARNTRLAPEG*ALEALT
Trigger: CGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAG...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGCTGGCACCAGAAGGCTaGGCACTGGAAGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKLAPEG*ALEALT
Trigger: CGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAG...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp CATGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTCTGGCACCAGAAGGCTaGGCACTGGAAGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: HAHGLGDWQCPHIQCLVLLAPEG*ALEALT
Trigger: CGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAG...AAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGGGCCTTGCCTCGAGCTaGAGAGGCCACAAGACACTT +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEGLASS*RGHKTL
Trigger: AAGTGTCTTGTGGCCTCTGCAGCTCGAGGCAAGGCC...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCGGCCTTGCCTCGAGCTaGAGAGGCCACAAGACACTT +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTGLASS*RGHKTL
Trigger: AAGTGTCTTGTGGCCTCTGCAGCTCGAGGCAAGGCC...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAACCGCTTTCGAGGGGTTaGCCCTGCACCGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKPLSRG*PCTANP
Trigger: GGGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGG...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GCTATCTTTGTCACTTGCCACAAAAGCGAAGTCCCTGTCACTGTTCCGGAAGCACCGCTTTCGAGGGGTTaGCCCTGCACCGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: AIFVTCHKSEVPVTVPEAPLSRG*PCTANP
Trigger: GGGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGG...TGCTTCCGGAACAGTGACAGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGGGTCCTACGTTGTGGTaGAGTGCCTCCCAGTCATCC +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEGPTLW*SASQSS
Trigger: GGATGACTGGGAGGCACTGCACCACAACGTAGGACC...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp CCGGAAGCATGTGGGAGCACAGAAGGGAATCAGCCCAGCCTCTCGGACTCTCCCTGCCTGAATGGGGTGTaGAGTCATGAGAGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: PEACGSTEGNQPSLSDSPCLNGV*SHERVR
Trigger: TCTGACTCTCTCATGACTGCACACCCCATTCAGGCA...GGGAGAGTCCGAGAGGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp CATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCGTGGGGATCACAGCCTaGAGCCGGGAGGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: HGLGDWQCPHIQCLVLLSVGITA*SREGEV
Trigger: TACTTCTCCCTCCCGGCTGCAGGCTGTGATCCCCAC...GCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR CCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGACTGGGTGCTACCGCTaGGTACATGCCAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGARTGCYR*VHASSK
Trigger: CTTACTACTGGCATGTACCCAGCGGTAGCACCCAGT...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCGTTGGGCGCTGCCACTaGGTGCTACCGCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFVGRCH*VLPLGT
Trigger: TGTACCCAGCGGTAGCACCCAGTGGCAGCGCCCAAC...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATGTTGGGCGCTGCCACTaGGTGCTACCGCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNVGRCH*VLPLGT
Trigger: TGTACCCAGCGGTAGCACCCAGTGGCAGCGCCCAAC...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp TGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGGTTGGGCGCTGCCACTaGGTGCTACCGCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: WTQSLLPQPSQISLGHMEVGRCH*VLPLGT
Trigger: TGTACCCAGCGGTAGCACCCAGTGGCAGCGCCCAAC...CTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGAGAAGGATCTCCCTTTaGGGGGCCGCAGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKRRISL*GAAVPR
Trigger: TCTGGGGACTGCGGCCCCCCAAAGGGAGATCCTTCT...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp AGCTATCTTTGTCACTTGCCACAAAAGCGAAGTCCCTGTCACTGTTCCGGAAGCACCCCAGGCACCATCTaGAGGCTGGCTCCGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SYLCHLPQKRSPCHCSGSTPGTI*RLAPAA
Trigger: CGCAGCCGGAGCCAGCCTCCAGATGGTGCCTGGGGT...GCTTCCGGAACAGTGACAGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATGGCTCGTAGGGCACTGGCAATaGCCTTGGCAGGGACATCAC +
Preference number: 4 (lower is better)
Translates to: AANTNKCHKAHRALPQWLVGHWQ*PWQGHH
Trigger: GTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTAC...GAGCCATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGGCCCATGTAGGGCACTaGCAATGGCCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VTEVEPTVQGWTGARNTRAHVGH*QWPWQG
Trigger: TCCCTGCCAAGGCCATTGCCAGTGCCCTACATGGGC...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp CATGTAGGGCACTGGCAATGGCCTTGGCAGGGACATCACAGCAAAACACATGGCGCCCATGTAGGGCACTaGCAATGGCCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HVGHWQWPWQGHHSKTHGAHVGH*QWPWQG
Trigger: TCCCTGCCAAGGCCATTGCCAGTGCCCTACATGGGC...GCCATGTGTTTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp ATCAGTGGGGATCACAGCCTGCAGCCGGGAGGGAGAAGTAGCTCTTGCTTGGGGCATGGCCTTGGTGACTaGCAGTGTCCCCATATACAG +
Preference number: 4 (lower is better)
Translates to: ISGDHSLQPGGRSSSCLGHGLGD*QCPHIQ
Trigger: CTGTATATGGGGACACTGCCAGTCACCAAGGCCATG...CCCCAAGCAAGAGCTACTTCTCCCTCCCGGCTGCAGGCTGTGATCCCCACTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR CCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGAGGGCACTGCCACAATaGCTCCTCCTCTGTACTGGC +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKRALPQ*LLLCTG
Trigger: GCCAGTACAGAGGAGGAGCCATTGTGGCAGTGCCCT...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp CAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAAGGGCACTGCCACAATaGCTCCTCCTCTGTACTGGC +
Preference number: 4 (lower is better)
Translates to: QLSRVGQGQGTQGPKERGRALPQ*LLLCTG
Trigger: GCCAGTACAGAGGAGGAGCCATTGTGGCAGTGCCCT...TCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATGGCTCAGGGCACTGCCACAATaGCTCCTCCTCTGTACTGGC +
Preference number: 4 (lower is better)
Translates to: AANTNKCHKAHRALPQWLRALPQ*LLLCTG
Trigger: GCCAGTACAGAGGAGGAGCCATTGTGGCAGTGCCCT...GAGCCATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAACCCCCTGCATGGGGCTaGCACCAGAAGGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKPPAWG*HQKAAH
Trigger: GTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGGGG...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATGGGCAGGGGACCTCCTaGGGAATCCATGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNGQGTS*GIHGAG
Trigger: ACCAGCTCCATGGATTCCCCAGGAGGTCCCCTGCCC...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCAGGGTCCTACGTTGTaGTGCAGTGCCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEQGPTL*CSASQS
Trigger: TGACTGGGAGGCACTGCACCACAACGTAGGACCCTG...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GGATCAGCATCAGTGGGGATCACAGCCTGCAGCCGGGAGGGAGAAGTAGCTCTTGAGCCTGCAGGAGGCTaGAAAGTCAGGCTAGGGATA +
Preference number: 4 (lower is better)
Translates to: GSASVGITACSREGEVALEPAGG*KVRLGI
Trigger: TATCCCTAGCCTGACTTTCCAGCCTCCTGCAGGCTC...AAGAGCTACTTCTCCCTCCCGGCTGCAGGCTGTGATCCCCACTGATGCTGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR CCA 90 bp CACCTGTCACTGTTCCGGAAGCATGTGGGAGCACAGAAGGGAATCAGCCCAGCCCAGGGGTTCAAGTACTaGGGATCAGCATCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: HLSLFRKHVGAQKGISPAQGFKY*GSASVG
Trigger: CCCCACTGATGCTGATCCCCAGTACTTGAACCCCTG...GGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACAGTGACAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR TCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAAACTCATCAGGCGCCTaGAGACCGACACGCCGAACA +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRNSSGA*RPTRRT
Trigger: TGTTCGGCGTGTCGGTCTTCAGGCGCCTGATGAGTT...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR TCA 90 bp GTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAGTTACTCCGGTCCAGTaGACTCTCCAGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: VEPTVQGWTGARNTRTQGVTPVQ*TLQAGE
Trigger: TTCTCCAGCCTGGAGAGTTCACTGGACCGGAGTAAC...TCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGAGTGCCTCGTACTTCTaGGCAGCTTGGCTTACCGCA +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKSASYF*AAWLTA
Trigger: TGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACT...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATGCCCATGGCCTTGGTaGCTGGCAGTGTCCCCATAT +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRCPWPW*LAVSPY
Trigger: ATATGGGGACACTGCCAGTCACCAAGGCCATGGGCA...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp CTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGGGCCCAGGTCAGCGATaGGGCCAAAGGTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: LPQPSQISLGHMEQRGFQGPGQR*GQRCVG
Trigger: ACCCACACACCTTTGGCCTCATCGCTGACCTGGGCC...CTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAAGCGCACTGGAAGCTCTaGCGGCCCAGGTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKAHWKL*RPRSAM
Trigger: CATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGC...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp ACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCGCACTGGAAGCTCTaGCGGCCCAGGTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: TSPAFPDKFRAYGAERVSAHWKL*RPRSAM
Trigger: CATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGC...TGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGAGAGTCAGACACACTaGGCATGGTGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPESQTH*AWWGPR
Trigger: CCTGGGTCCCCACCATGCTCAGTGTGTCTGACTCTC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGGAGAGTCAGACACACTaGGCATGGTGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: AFPDKFRAYGAERVSAGRESQTH*AWWGPR
Trigger: CCTGGGTCCCCACCATGCTCAGTGTGTCTGACTCTC...CCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGACTGCTCTTCCCCGGTaGCAGGTCCTCTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKTALPR*QVLFRY
Trigger: GTACCTGAAGAGGACCTGGCACCGGGGAAGAGCAGT...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GGGTCCACATCAGAGGATCTGTGTCCAGGGGTTCAAGTACTGGGGATCAGCATCACTGCTCTTCCCCGGTaGCAGGTCCTCTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: GSTSEDLCPGVQVLGISITALPR*QVLFRY
Trigger: GTACCTGAAGAGGACCTGGCACCGGGGAAGAGCAGT...GATGCTGATCCCCAGTACTTGAACCCCTGGACACAGATCCTCTGATGTGGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR GCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTCAGAGAGTCCCCCTaGATGGGGCTGGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKFRESP*MGLAPE
Trigger: TTCTGGTGCCAGCCCCATGCAGGGGGACTCTCTGAA...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp AGTCATGAGAGAGTCAGACACACTGAGCATGGTGGGGACCCAGGCATTCCGGTCACCATACAGGCAGCCTaGACAGCTTCAGAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SHERVRHTEHGGDPGIPVTIQAA*TASESP
Trigger: GGGACTCTCTGAAGCTGTGCAGGCTGCCTGTATGGT...GACCGGAATGCCTGGGTCCCCACCATGCTCAGTGTGTCTGACTCTCTCATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GTTCAAGTACTGGGGATCAGCATCAGTGGGGATCACAGCCTGCAGCCGGGAGGGTACGTTGTGGTGCAGTaGCTCCCAGTCATCCGTATA +
Preference number: 4 (lower is better)
Translates to: VQVLGISISGDHSLQPGGYVVVQ*LPVIRI
Trigger: TATACGGATGACTGGGAGGCACTGCACCACAACGTA...CCCTCCCGGCTGCAGGCTGTGATCCCCACTGATGCTGATCCCCAGTACTTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR GCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGGGTCCTACGTTGTGGTaGAGTGCCTCCCAGTCATCC +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKGPTLW*SASQSS
Trigger: GGATGACTGGGAGGCACTGCACCACAACGTAGGACC...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGTGCCTGAATGGGGTGTaGAGTCATGAGAGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGARCLNGV*SHERVR
Trigger: TCTGACTCTCTCATGACTGCACACCCCATTCAGGCA...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp CAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGTACCTGCAGCATCGTaGATCTTCCTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QLSRVGQGQGTQGPKERGVPAAS*IFLQPG
Trigger: TCCTGGCTGGAGGAAGATCCACGATGCTGCAGGTAC...TCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp TCTGGGCACAAAGCCCATGTAGGGCACTGGCAATGGCCTTGGCAGGGACATCACACTGGGTGCTACCGCTaGGTACATGCCAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: SGHKAHVGHWQWPWQGHHTGCYR*VHASSK
Trigger: CTTACTACTGGCATGTACCCAGCGGTAGCACCCAGT...GTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTACATGGGCTTTGTGCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp AACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATGGCTCCTCCTCAGAAGGATCTCCCTTTaGGGGGCCGCAGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: NTNKCHKAHRALPQWLLLRRISL*GAAVPR
Trigger: TCTGGGGACTGCGGCCCCCCAAAGGGAGATCCTTCT...GAGGAGGAGCCATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAAGAAGGATCTCCCTTTaGGGGGCCGCAGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: DPEPTSPAFPDKFRAYGARRISL*GAAVPR
Trigger: TCTGGGGACTGCGGCCCCCCAAAGGGAGATCCTTCT...TGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGGTCTGGGCCAGCTGCTaGATACAGTTATTGACTGCA +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGARVWASC*IQLLTA
Trigger: TGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGAC...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp AGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGACTCCGGCTGCGGGTCTaGGCCAGCTGCTGGATACAG +
Preference number: 4 (lower is better)
Translates to: RAYGAERVSAGRHQEKRRLRLRV*ASCWIQ
Trigger: CTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAG...TCTTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCATCATCAGCATGTTCTaGCCCTCACCCCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTIISMF*PSPQAP
Trigger: TGGTGCCTGGGGTGAGGGCCAGAACATGCTGATGAT...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGATCATCAGCATGTTCTaGCCCTCACCCCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEIISMF*PSPQAP
Trigger: TGGTGCCTGGGGTGAGGGCCAGAACATGCTGATGAT...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAGCTCCACTTGCCGTGGCAGCAGTGGATCAGACTGTaGTCCAGGGGATTCACTAGG +
Preference number: 4 (lower is better)
Translates to: VLLSSLAYRIQQLHLPWQQWIRL*SRGFTR
Trigger: CCTAGTGAATCCCCTGGACCACAGTCTGATCCACTG...CTGCCACGGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGATGTGCACCAGAGGCTaGCAGTGGATCAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEMCTRG*QWIRLW
Trigger: CCACAGTCTGATCCACTGCCAGCCTCTGGTGCACAT...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
CDS-3UTR CCA 90 bp GCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACACCAATAAACACTGGCAATGGCCTTaGCAGGGACATCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: AQVSDEAKGVWVAANTNKHWQWP*QGHHSK
Trigger: TTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTG...TTTATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAGTAGGGCACTGGCAATaGCCTTGGCAGGGACATCAC +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRVGHWQ*PWQGHH
Trigger: GTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTAC...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGCCCATGTAGGGCACTaGCAATGGCCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPAHVGH*QWPWQG
Trigger: TCCCTGCCAAGGCCATTGCCAGTGCCCTACATGGGC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGGCCCATGTAGGGCACTaGCAATGGCCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: WTQSLLPQPSQISLGHMEAHVGH*QWPWQG
Trigger: TCCCTGCCAAGGCCATTGCCAGTGCCCTACATGGGC...CTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGGAGGCCAAAGGTGTGTaGGTCGCGGCCAACACCAAT +
Preference number: 4 (lower is better)
Translates to: VTEVEPTVQGWTGARNTREAKGV*VAANTN
Trigger: ATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTC...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp CATGTAGGGCACTGGCAATGGCCTTGGCAGGGACATCACAGCAAAACACATGGCCAGGGTCCTACGTTGTaGTGCAGTGCCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: HVGHWQWPWQGHHSKTHGQGPTL*CSASQS
Trigger: TGACTGGGAGGCACTGCACCACAACGTAGGACCCTG...GCCATGTGTTTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGGGGGATCAGCATCAGTaGGGATCACAGCCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKGDQHQ*GSQPEA
Trigger: AGCCTCTGGCTGTGATCCCCACTGATGCTGATCCCC...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509914.5
3UTR CAA 72 bp TGTCCCCATATACAGTGCCTCGTACTTCTGAGCAGCTaGGCTTACCGCATCCAGCAGCTCCACTTGCCGTGG +
Preference number: 4 (lower is better)
Translates to: CPHIQCLVLLSS*AYRIQQLHLPW
Trigger: CCACGGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGACCTCTACTCGCTCTaGCAAGATCTGGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKDLYSL*QDLGTK
Trigger: CTTTGTGCCCAGATCTTGTCAGAGCGAGTAGAGGTC...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp GGGTCGCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATGACCTCTACTCGCTCTaGCAAGATCTGGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: GSRPTPINVTRRTGHCHNDLYSL*QDLGTK
Trigger: CTTTGTGCCCAGATCTTGTCAGAGCGAGTAGAGGTC...ATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGCGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAAGTGCCTCGTACTTCTaGGCAGCTTGGCTTACCGCA +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRSASYF*AAWLTA
Trigger: TGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACT...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp CATGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTAGTGCCTCGTACTTCTaGGCAGCTTGGCTTACCGCA +
Preference number: 4 (lower is better)
Translates to: HAHGLGDWQCPHIQCLVLSASYF*AAWLTA
Trigger: TGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACT...AAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATTGCCCATGGCCTTGGTaGCTGGCAGTGTCCCCATAT +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNCPWPW*LAVSPY
Trigger: ATATGGGGACACTGCCAGTCACCAAGGCCATGGGCA...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGGAAGGCTTCAAGGAGTaGCAGGCTATAGGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEEGFKE*QAIGLE
Trigger: CTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTC...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAACTGCTCTTCCCCGGTaGCAGGTCCTCTTCAGGTAC +
Preference number: 4 (lower is better)
Translates to: DPEPTSPAFPDKFRAYGATALPR*QVLFRY
Trigger: GTACCTGAAGAGGACCTGGCACCGGGGAAGAGCAGT...TGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAACCCCACACACGGATGTaGACCAGAGGCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKPHTRM*TRGWQW
Trigger: CCACTGCCAGCCTCTGGTGCACATCCGTGTGTGGGG...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
CDS-3UTR GCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCTTCAGAGAGTCCCCCTaGATGGGGCTGGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFFRESP*MGLAPE
Trigger: TTCTGGTGCCAGCCCCATGCAGGGGGACTCTCTGAA...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATTTCAGAGAGTCCCCCTaGATGGGGCTGGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: AVSPYTVPRTSEQLGLPHFRESP*MGLAPE
Trigger: TTCTGGTGCCAGCCCCATGCAGGGGGACTCTCTGAA...ATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGACACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGTTCAGAGAGTCCCCCTaGATGGGGCTGGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: AFPDKFRAYGAERVSAGRFRESP*MGLAPE
Trigger: TTCTGGTGCCAGCCCCATGCAGGGGGACTCTCTGAA...CCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATGGCCTTGCCTCGAGCTaGAGAGGCCACAAGACACTT +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNGLASS*RGHKTL
Trigger: AAGTGTCTTGTGGCCTCTGCAGCTCGAGGCAAGGCC...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACACCAATAAATACGTTGTGGTGCAGTaGCTCCCAGTCATCCGTATA +
Preference number: 4 (lower is better)
Translates to: AQVSDEAKGVWVAANTNKYVVVQ*LPVIRI
Trigger: TATACGGATGACTGGGAGGCACTGCACCACAACGTA...TTTATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGGTCCTACGTTGTGGTaGAGTGCCTCCCAGTCATCC +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPGPTLW*SASQSS
Trigger: GGATGACTGGGAGGCACTGCACCACAACGTAGGACC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp TATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAGCTCCAGGTCCTACGTTGTGGTaGAGTGCCTCCCAGTCATCC +
Preference number: 4 (lower is better)
Translates to: YTVPRTSEQLGLPHPAAPGPTLW*SASQSS
Trigger: GGATGACTGGGAGGCACTGCACCACAACGTAGGACC...TGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCGTCTGGATCCCCGAATaGTTGCGTGTTTCCGTGTGT +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTVWIPE*LRVSVC
Trigger: ACACACGGAAACACGCAACCATTCGGGGATCCAGAC...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR CCA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGGTACCTGCAGCATCGTaGATCTTCCTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VTEVEPTVQGWTGARNTRVPAAS*IFLQPG
Trigger: TCCTGGCTGGAGGAAGATCCACGATGCTGCAGGTAC...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCGTGAACTCTCCAGGCTaGAGAAGGATCTCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTVNSPG*RRISLW
Trigger: CCAAAGGGAGATCCTTCTCCAGCCTGGAGAGTTCAC...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGGTGAACTCTCCAGGCTaGAGAAGGATCTCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEVNSPG*RRISLW
Trigger: CCAAAGGGAGATCCTTCTCCAGCCTGGAGAGTTCAC...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAGCTCCACTTGCCGTGGCAGGTCTGGGCCAGCTGCTaGATACAGTTATTGACTGCA +
Preference number: 4 (lower is better)
Translates to: VLLSSLAYRIQQLHLPWQVWASC*IQLLTA
Trigger: TGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGAC...CTGCCACGGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCAGTGGATCAGACTGTaGTCCAGGGGATTCACTAGG +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEQWIRL*SRGFTR
Trigger: CCTAGTGAATCCCCTGGACCACAGTCTGATCCACTG...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGCAGTGGATCAGACTGTaGTCCAGGGGATTCACTAGG +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKQWIRL*SRGFTR
Trigger: CCTAGTGAATCCCCTGGACCACAGTCTGATCCACTG...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATGTAGGGCACTGGCAATaGCCTTGGCAGGGACATCAC +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNVGHWQ*PWQGHH
Trigger: GTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTAC...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGTAGGGCACTGGCAATaGCCTTGGCAGGGACATCAC +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPVGHWQ*PWQGHH
Trigger: GTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTAC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp AACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATGGCTCCTCCTCGTAGGGCACTGGCAATaGCCTTGGCAGGGACATCAC +
Preference number: 4 (lower is better)
Translates to: NTNKCHKAHRALPQWLLLVGHWQ*PWQGHH
Trigger: GTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTAC...GAGGAGGAGCCATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCGCTCTGACAAGATCTaGGCACAAAGCCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGERSDKI*AQSPCR
Trigger: CCTACATGGGCTTTGTGCCCAGATCTTGTCAGAGCG...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp TGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGAGGGCACTGCCACAATaGCTCCTCCTCTGTACTGGC +
Preference number: 4 (lower is better)
Translates to: WTQSLLPQPSQISLGHMERALPQ*LLLCTG
Trigger: GCCAGTACAGAGGAGGAGCCATTGTGGCAGTGCCCT...CTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGGAGGCCAAAGGTGTGTaGGTCGCGGCCAACACCAAT +
Preference number: 4 (lower is better)
Translates to: AFPDKFRAYGAERVSAGREAKGV*VAANTN
Trigger: ATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTC...CCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp AACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATGGCTCCTCCTCGAGGCCAAAGGTGTGTaGGTCGCGGCCAACACCAAT +
Preference number: 4 (lower is better)
Translates to: NTNKCHKAHRALPQWLLLEAKGV*VAANTN
Trigger: ATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTC...GAGGAGGAGCCATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGAGGCCAAAGGTGTGTaGGTCGCGGCCAACACCAAT +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPEAKGV*VAANTN
Trigger: ATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATCAGGGTCCTACGTTGTaGTGCAGTGCCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNQGPTL*CSASQS
Trigger: TGACTGGGAGGCACTGCACCACAACGTAGGACCCTG...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGGGGGATCAGCATCAGTaGGGATCACAGCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: AINRRWTRIGGTGREGFKGDQHQ*GSQPAA
Trigger: GGCTGCAGGCTGTGATCCCCACTGATGCTGATCCCC...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR CCA 90 bp TGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGACACCCCGCATCACAGCCAGAGGCTaGCAGTGGATCAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: WSREGFSRKASRKEKTPRITARG*QWIRLW
Trigger: CCACAGTCTGATCCACTGCCAGCCTCTGGCTGTGAT...GCGGGGTGTCTTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509914.5
CDS-3UTR TCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCACCACCGCCCAACTATaGACTCATCAGGCGCCTGAA +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFTTAQL*THQAPE
Trigger: TTCAGGCGCCTGATGAGTTCATAGTTGGGCGGTGGT...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR TCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATGTTACTCCGGTCCAGTaGACTCTCCAGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNVTPVQ*TLQAGE
Trigger: TTCTCCAGCCTGGAGAGTTCACTGGACCGGAGTAAC...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGTTACTCCGGTCCAGTaGACTCTCCAGGCTGGAGAA +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPVTPVQ*TLQAGE
Trigger: TTCTCCAGCCTGGAGAGTTCACTGGACCGGAGTAAC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp GTTCAAGTACTGGGGATCAGCATCAGTGGGGATCACAGCCTGCAGCCGGGAGGGGCTGGATACAGTTATTaGCTGCAATACTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VQVLGISISGDHSLQPGGAGYSY*LQYCSS
Trigger: GGAAGAGCAGTATTGCAGTCAATAACTGTATCCAGC...CCCTCCCGGCTGCAGGCTGTGATCCCCACTGATGCTGATCCCCAGTACTTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR TCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGAAGAGGCATCACCACTaGCCTCTACTCGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKKRHHH*PLLALT
Trigger: TGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTT...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAGTGCCTCGTACTTCTaGGCAGCTTGGCTTACCGCA +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNSASYF*AAWLTA
Trigger: TGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACT...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp TTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCAAGTGCCTCGTACTTCTaGGCAGCTTGGCTTACCGCA +
Preference number: 4 (lower is better)
Translates to: LGMDPEPTSPAFPDKFRASASYF*AAWLTA
Trigger: TGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACT...TGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAAGAGAGTCAGACACACTaGGCATGGTGGGGACCCAGG +
Preference number: 4 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKESQTH*AWWGPR
Trigger: CCTGGGTCCCCACCATGCTCAGTGTGTCTGACTCTC...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGGATACAGTTATTGACTaGAATACTGCTCTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: SRVGQGQGTQGPKERGARDTVID*NTALPR
Trigger: CCGGGGAAGAGCAGTATTGCAGTCAATAACTGTATC...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGCGGGTCTGGGCCAGCTaGTGGATACAGTTATTGACT +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKRVWAS*WIQLLT
Trigger: AGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCG...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGCGGGTCTGGGCCAGCTaGTGGATACAGTTATTGACT +
Preference number: 4 (lower is better)
Translates to: VTEVEPTVQGWTGARNTRRVWAS*WIQLLT
Trigger: AGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCG...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGACGGGTCTGGGCCAGCTaGTGGATACAGTTATTGACT +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRRVWAS*WIQLLT
Trigger: AGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCG...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGTGTCCCCATATACAGTaGCTCGTACTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKCPHIQ*LVLLSS
Trigger: GCTGCTCAGAAGTACGAGGCACTGTATATGGGGACA...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCTGTCCCCATATACAGTaGCTCGTACTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTCPHIQ*LVLLSS
Trigger: GCTGCTCAGAAGTACGAGGCACTGTATATGGGGACA...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGTGTCCCCATATACAGTaGCTCGTACTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGECPHIQ*LVLLSS
Trigger: GCTGCTCAGAAGTACGAGGCACTGTATATGGGGACA...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GGGTCGCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATTGTCCCCATATACAGTaGCTCGTACTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSRPTPINVTRRTGHCHNCPHIQ*LVLLSS
Trigger: GCTGCTCAGAAGTACGAGGCACTGTATATGGGGACA...ATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGCGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp CACTCACCTGTCACTGTTCCGGAAGCATGTGGGAGCACAGAAGGGAATCAGCCCTGTCCCCATATACAGTaGCTCGTACTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HSPVTVPEACGSTEGNQPCPHIQ*LVLLSS
Trigger: GCTGCTCAGAAGTACGAGGCACTGTATATGGGGACA...GGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACAGTGACAGGTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR GCA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAACTGGCACCAGAAGGCTaGGCACTGGAAGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKLAPEG*ALEALT
Trigger: CGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAG...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp CTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGGGTCCTACGTTGTGGTaGAGTGCCTCCCAGTCATCC +
Preference number: 4 (lower is better)
Translates to: LPQPSQISLGHMEQRGFQGPTLW*SASQSS
Trigger: GGATGACTGGGAGGCACTGCACCACAACGTAGGACC...CTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGATGCCTGAATGGGGTGTaGAGTCATGAGAGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VEPTVQGWTGARNTRTQGCLNGV*SHERVR
Trigger: TCTGACTCTCTCATGACTGCACACCCCATTCAGGCA...TCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGTACCTGCAGCATCGTaGATCTTCCTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPVPAAS*IFLQPG
Trigger: TCCTGGCTGGAGGAAGATCCACGATGCTGCAGGTAC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCGTACCTGCAGCATCGTaGATCTTCCTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSQISLGHMEQRGFQPEGVPAAS*IFLQPG
Trigger: TCCTGGCTGGAGGAAGATCCACGATGCTGCAGGTAC...GCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAACTGGGTGCTACCGCTaGGTACATGCCAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRTGCYR*VHASSK
Trigger: CTTACTACTGGCATGTACCCAGCGGTAGCACCCAGT...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGACTGGGTGCTACCGCTaGGTACATGCCAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKTGCYR*VHASSK
Trigger: CTTACTACTGGCATGTACCCAGCGGTAGCACCCAGT...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAAAGAAGGATCTCCCTTTaGGGGGCCGCAGTCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKRRISL*GAAVPR
Trigger: TCTGGGGACTGCGGCCCCCCAAAGGGAGATCCTTCT...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGAAAGCACTTAGCCCCTaGCTCCATGCTCTGGATGTA +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKKALSP*LHALDV
Trigger: TACATCCAGAGCATGGAGCCAGGGGCTAAGTGCTTT...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GGGTCGCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATAAAGCACTTAGCCCCTaGCTCCATGCTCTGGATGTA +
Preference number: 4 (lower is better)
Translates to: GSRPTPINVTRRTGHCHNKALSP*LHALDV
Trigger: TACATCCAGAGCATGGAGCCAGGGGCTAAGTGCTTT...ATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGCGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp CAGCTTGGCTTACCGCATCCAGCAGCTCCACTTGCCGTGGCAGGTCTTCAGGAGGATTCACTAGGCTCATaGCATCCTTCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: QLGLPHPAAPLAVAGLQEDSLGS*HPSSGS
Trigger: TGATCCTGAAGAAGGATGCCATGAGCCTAGTGAATC...CTCCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGACACCCCGCCAGTGGATCAGACTGTaGTCCAGGGGATTCACTAGG +
Preference number: 4 (lower is better)
Translates to: WSREGFSRKASRKEKTPRQWIRL*SRGFTR
Trigger: CCTAGTGAATCCCCTGGACCACAGTCTGATCCACTG...GCGGGGTGTCTTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATATGTGCACCAGAGGCTaGCAGTGGATCAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNMCTRG*QWIRLW
Trigger: CCACAGTCTGATCCACTGCCAGCCTCTGGTGCACAT...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
CDS-3UTR CCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCATGTGCACCAGAGGCTaGCAGTGGATCAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFMCTRG*QWIRLW
Trigger: CCACAGTCTGATCCACTGCCAGCCTCTGGTGCACAT...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGATGTGCACCAGAGGCTaGCAGTGGATCAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: WTQSLLPQPSQISLGHMEMCTRG*QWIRLW
Trigger: CCACAGTCTGATCCACTGCCAGCCTCTGGTGCACAT...CTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCATGTGCACCAGAGGCTaGCAGTGGATCAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: PSQISLGHMEQRGFQPEGMCTRG*QWIRLW
Trigger: CCACAGTCTGATCCACTGCCAGCCTCTGGTGCACAT...GCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCTCTGACAAGATCCACTGGCAATGGCCTTaGCAGGGACATCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: SGEQQEASPLTSTRSDKIHWQWP*QGHHSK
Trigger: TTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTG...GATCTTGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCTCTGACAAGATCCGCTCTGACAAGATCTaGGCACAAAGCCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: SGEQQEASPLTSTRSDKIRSDKI*AQSPCR
Trigger: CCTACATGGGCTTTGTGCCCAGATCTTGTCAGAGCG...GATCTTGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGCATGGCCTTGGTGACTaGCAGTGTCCCCATATACAG +
Preference number: 4 (lower is better)
Translates to: VTEVEPTVQGWTGARNTRHGLGD*QCPHIQ
Trigger: CTGTATATGGGGACACTGCCAGTCACCAAGGCCATG...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp CATGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTCATGGCCTTGGTGACTaGCAGTGTCCCCATATACAG +
Preference number: 4 (lower is better)
Translates to: HAHGLGDWQCPHIQCLVLHGLGD*QCPHIQ
Trigger: CTGTATATGGGGACACTGCCAGTCACCAAGGCCATG...AAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGAGGGCACTGCCACAATaGCTCCTCCTCTGTACTGGC +
Preference number: 4 (lower is better)
Translates to: AINRRWTRIGGTGREGFKRALPQ*LLLCTG
Trigger: GCCAGTACAGAGGAGGAGCCATTGTGGCAGTGCCCT...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGAGGGCACTGCCACAATaGCTCCTCCTCTGTACTGGC +
Preference number: 4 (lower is better)
Translates to: LPQPSQISLGHMEQRGFQRALPQ*LLLCTG
Trigger: GCCAGTACAGAGGAGGAGCCATTGTGGCAGTGCCCT...CTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGCAGGGTCCTACGTTGTaGTGCAGTGCCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: AINRRWTRIGGTGREGFKQGPTL*CSASQS
Trigger: TGACTGGGAGGCACTGCACCACAACGTAGGACCCTG...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp TTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCACAGGGGTTCAAGTACTaGGGATCAGCATCAGTGGGG +
Preference number: 4 (lower is better)
Translates to: LGMDPEPTSPAFPDKFRAQGFKY*GSASVG
Trigger: CCCCACTGATGCTGATCCCCAGTACTTGAACCCCTG...TGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp CTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAGCTCCACTTGCCGTGGGCTGGATACAGTTATTaGCTGCAATACTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LVLLSSLAYRIQQLHLPWAGYSY*LQYCSS
Trigger: GGAAGAGCAGTATTGCAGTCAATAACTGTATCCAGC...CCACGGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATGACCTCTACTCGCTCTaGCAAGATCTGGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNDLYSL*QDLGTK
Trigger: CTTTGTGCCCAGATCTTGTCAGAGCGAGTAGAGGTC...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp TTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCAGACCTCTACTCGCTCTaGCAAGATCTGGGCACAAAG +
Preference number: 4 (lower is better)
Translates to: LGMDPEPTSPAFPDKFRADLYSL*QDLGTK
Trigger: CTTTGTGCCCAGATCTTGTCAGAGCGAGTAGAGGTC...TGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAAGAGGCATCACCACTaGCCTCTACTCGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPKRHHH*PLLALT
Trigger: TGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTT...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGAGGCATCACCACTaGCCTCTACTCGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFKRHHH*PLLALT
Trigger: TGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTT...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GCTATCTTTGTCACTTGCCACAAAAGCGAAGTCCCTGTCACTGTTCCGGAAGCATGCCCATGGCCTTGGTaGCTGGCAGTGTCCCCATAT +
Preference number: 4 (lower is better)
Translates to: AIFVTCHKSEVPVTVPEACPWPW*LAVSPY
Trigger: ATATGGGGACACTGCCAGTCACCAAGGCCATGGGCA...TGCTTCCGGAACAGTGACAGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGACACTTCTGGTACTaGACCATACAGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPRHFWY*TIQAAC
Trigger: GCAGGCTGCCTGTATGGTTCAGTACCAGAAGTGTCT...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGAGACACTTCTGGTACTaGACCATACAGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: AFPDKFRAYGAERVSAGRRHFWY*TIQAAC
Trigger: GCAGGCTGCCTGTATGGTTCAGTACCAGAAGTGTCT...CCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp TGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGGAAGGCTTCAAGGAGTaGCAGGCTATAGGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: WTQSLLPQPSQISLGHMEEGFKE*QAIGLE
Trigger: CTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTC...CTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp CAGCACATCCATGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCCAGTAGTAAGTACCTaGAGCATCGTGGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: QHIHAHGLGDWQCPHIQCPVVST*SIVDLP
Trigger: AGGAAGATCCACGATGCTGCAGGTACTTACTACTGG...GCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCATGGATGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp TGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCGGGTCTGGGCCAGCTaGTGGATACAGTTATTGACT +
Preference number: 4 (lower is better)
Translates to: WTQSLLPQPSQISLGHMERVWAS*WIQLLT
Trigger: AGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCG...CTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGACCATACAGGCAGCCTaGACAGCTTCAGAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: AINRRWTRIGGTGREGFKTIQAA*TASESP
Trigger: GGGACTCTCTGAAGCTGTGCAGGCTGCCTGTATGGT...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAACCGCTTTCGAGGGGTTaGCCCTGCACCGCCAACCCC +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKPLSRG*PCTANP
Trigger: GGGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGG...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGTACGTTGTGGTGCAGTaGCTCCCAGTCATCCGTATA +
Preference number: 4 (lower is better)
Translates to: VTEVEPTVQGWTGARNTRYVVVQ*LPVIRI
Trigger: TATACGGATGACTGGGAGGCACTGCACCACAACGTA...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATACGTTGTGGTGCAGTaGCTCCCAGTCATCCGTATA +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRYVVVQ*LPVIRI
Trigger: TATACGGATGACTGGGAGGCACTGCACCACAACGTA...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTACGTTGTGGTGCAGTaGCTCCCAGTCATCCGTATA +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKYVVVQ*LPVIRI
Trigger: TATACGGATGACTGGGAGGCACTGCACCACAACGTA...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTGCCTGAATGGGGTGTaGAGTCATGAGAGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKCLNGV*SHERVR
Trigger: TCTGACTCTCTCATGACTGCACACCCCATTCAGGCA...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp CATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCTGCCTGAATGGGGTGTaGAGTCATGAGAGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: HGLGDWQCPHIQCLVLLSCLNGV*SHERVR
Trigger: TCTGACTCTCTCATGACTGCACACCCCATTCAGGCA...GCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGTGAACTCTCCAGGCTaGAGAAGGATCTCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPVNSPG*RRISLW
Trigger: CCAAAGGGAGATCCTTCTCCAGCCTGGAGAGTTCAC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATGTGAACTCTCCAGGCTaGAGAAGGATCTCCCTTTGG +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNVNSPG*RRISLW
Trigger: CCAAAGGGAGATCCTTCTCCAGCCTGGAGAGTTCAC...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGAAAGCACTTAGCCCCTaGCTCCATGCTCTGGATGTA +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKKALSP*LHALDV
Trigger: TACATCCAGAGCATGGAGCCAGGGGCTAAGTGCTTT...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GTAGGGCACTGGCAATGGCCTTGGCAGGGACATCACAGCAAAACACATGGCACTAAAGCACTTAGCCCCTaGCTCCATGCTCTGGATGTA +
Preference number: 4 (lower is better)
Translates to: VGHWQWPWQGHHSKTHGTKALSP*LHALDV
Trigger: TACATCCAGAGCATGGAGCCAGGGGCTAAGTGCTTT...AGTGCCATGTGTTTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGGTCTGGGCCAGCTGCTaGATACAGTTATTGACTGCA +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKVWASC*IQLLTA
Trigger: TGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGAC...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAGCACCATCTGGAGGCTaGCTCCGGCTGCGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKAPSGG*LRLRVW
Trigger: CCAGACCCGCAGCCGGAGCCAGCCTCCAGATGGTGC...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCAGTGGATCAGACTGTaGTCCAGGGGATTCACTAGG +
Preference number: 4 (lower is better)
Translates to: AFPDKFRAYGAERVSAGRQWIRL*SRGFTR
Trigger: CCTAGTGAATCCCCTGGACCACAGTCTGATCCACTG...CCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATCACTGGCAATGGCCTTaGCAGGGACATCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNHWQWP*QGHHSK
Trigger: TTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTG...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp TTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGCCCATGTAGGGCACTaGCAATGGCCTTGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LGHMEQRGFQPEGIKKREAHVGH*QWPWQG
Trigger: TCCCTGCCAAGGCCATTGCCAGTGCCCTACATGGGC...TTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATCGCTCTGACAAGATCTaGGCACAAAGCCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNRSDKI*AQSPCR
Trigger: CCTACATGGGCTTTGTGCCCAGATCTTGTCAGAGCG...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp TTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCACGCTCTGACAAGATCTaGGCACAAAGCCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: LGMDPEPTSPAFPDKFRARSDKI*AQSPCR
Trigger: CCTACATGGGCTTTGTGCCCAGATCTTGTCAGAGCG...TGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCCATGGCCTTGGTGACTaGCAGTGTCCCCATATACAG +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFHGLGD*QCPHIQ
Trigger: CTGTATATGGGGACACTGCCAGTCACCAAGGCCATG...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp ACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAAGGGCACTGCCACAATaGCTCCTCCTCTGTACTGGC +
Preference number: 4 (lower is better)
Translates to: TSPAFPDKFRAYGAERVSRALPQ*LLLCTG
Trigger: GCCAGTACAGAGGAGGAGCCATTGTGGCAGTGCCCT...TGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAAGAGGCCAAAGGTGTGTaGGTCGCGGCCAACACCAAT +
Preference number: 4 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKEAKGV*VAANTN
Trigger: ATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTC...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GCTATCTTTGTCACTTGCCACAAAAGCGAAGTCCCTGTCACTGTTCCGGAAGCAGAGGCCAAAGGTGTGTaGGTCGCGGCCAACACCAAT +
Preference number: 4 (lower is better)
Translates to: AIFVTCHKSEVPVTVPEAEAKGV*VAANTN
Trigger: ATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTC...TGCTTCCGGAACAGTGACAGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAACCCCCTGCATGGGGCTaGCACCAGAAGGCTGCGCAC +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKPPAWG*HQKAAH
Trigger: GTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGGGG...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATGGCTCGCAATAAATAGACGGTaGACAAGGATCGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: AANTNKCHKAHRALPQWLAINRR*TRIGGT
Trigger: TGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC...GAGCCATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp AACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATGGCTCCTCCTCGGGGCTCAGGATACCTaGTTTTCACTCACCTGTCAC +
Preference number: 4 (lower is better)
Translates to: NTNKCHKAHRALPQWLLLGAQDT*FSLTCH
Trigger: GTGACAGGTGAGTGAAAACCAGGTATCCTGAGCCCC...GAGGAGGAGCCATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR TCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCGCTGGATACAGTTATTaGCTGCAATACTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTAGYSY*LQYCSS
Trigger: GGAAGAGCAGTATTGCAGTCAATAACTGTATCCAGC...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAGCGCACTGGAAGCTCTaGCGGCCCAGGTCAGCGATG +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKAHWKL*RPRSAM
Trigger: CATCGCTGACCTGGGCCGTCAGAGCTTCCAGTGCGC...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp CAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAACAGGCTATAGGCCTTaGGGAATAAAACGGTACAGA +
Preference number: 4 (lower is better)
Translates to: QLSRVGQGQGTQGPKERGTGYRP*GIKRYR
Trigger: TCTGTACCGTTTTATTCCTCAAGGCCTATAGCCTGT...TCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGACAGGCTATAGGCCTTaGGGAATAAAACGGTACAGA +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKTGYRP*GIKRYR
Trigger: TCTGTACCGTTTTATTCCTCAAGGCCTATAGCCTGT...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp CTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGGAAGGCTTCAAGGAGTaGCAGGCTATAGGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LPQPSQISLGHMEQRGFQEGFKE*QAIGLE
Trigger: CTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTC...CTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp TACCTGGTTTTCACTCACCTGTCACTGTTCCGGAAGCATGTGGGAGCACAGAAGGAAGGCTTCAAGGAGTaGCAGGCTATAGGCCTTGAG +
Preference number: 4 (lower is better)
Translates to: YLVFTHLSLFRKHVGAQKEGFKE*QAIGLE
Trigger: CTCAAGGCCTATAGCCTGTCACTCCTTGAAGCCTTC...CTTCTGTGCTCCCACATGCTTCCGGAACAGTGACAGGTGAGTGAAAACCAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR TCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGGCTATAAAGTGTTACTaGGGTAGAGCCAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEAIKCY*GRANCP
Trigger: TGGACAGTTGGCTCTACCTCAGTAACACTTTATAGC...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCGCTATAAAGTGTTACTaGGGTAGAGCCAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTAIKCY*GRANCP
Trigger: TGGACAGTTGGCTCTACCTCAGTAACACTTTATAGC...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGCCAGTAGTAAGTACCTaGAGCATCGTGGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKPVVST*SIVDLP
Trigger: AGGAAGATCCACGATGCTGCAGGTACTTACTACTGG...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp CATGTAGGGCACTGGCAATGGCCTTGGCAGGGACATCACAGCAAAACACATGGCCCAGTAGTAAGTACCTaGAGCATCGTGGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: HVGHWQWPWQGHHSKTHGPVVST*SIVDLP
Trigger: AGGAAGATCCACGATGCTGCAGGTACTTACTACTGG...GCCATGTGTTTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGGCTATCTTTGTCACTTaGCACAAAAGCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEAIFVT*HKSEVP
Trigger: AGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCGCTATCTTTGTCACTTaGCACAAAAGCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTAIFVT*HKSEVP
Trigger: AGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp CAGCACATCCATGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCGCTATCTTTGTCACTTaGCACAAAAGCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: QHIHAHGLGDWQCPHIQCAIFVT*HKSEVP
Trigger: AGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC...GCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCATGGATGTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GCTATCTTTGTCACTTGCCACAAAAGCGAAGTCCCTGTCACTGTTCCGGAAGCAACCATACAGGCAGCCTaGACAGCTTCAGAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: AIFVTCHKSEVPVTVPEATIQAA*TASESP
Trigger: GGGACTCTCTGAAGCTGTGCAGGCTGCCTGTATGGT...TGCTTCCGGAACAGTGACAGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCGTCTGGGCCAGCTGCTaGATACAGTTATTGACTGCA +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFVWASC*IQLLTA
Trigger: TGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGAC...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGTCTGGGCCAGCTGCTaGATACAGTTATTGACTGCA +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPVWASC*IQLLTA
Trigger: TGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGAC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCAGTCTGGGCCAGCTGCTaGATACAGTTATTGACTGCA +
Preference number: 4 (lower is better)
Translates to: LGMDPEPTSPAFPDKFRAVWASC*IQLLTA
Trigger: TGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGAC...TGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp ACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAATCATCAGCATGTTCTaGCCCTCACCCCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: TSPAFPDKFRAYGAERVSIISMF*PSPQAP
Trigger: TGGTGCCTGGGGTGAGGGCCAGAACATGCTGATGAT...TGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCGATTCACTAGGCTCATaGCATCCTTCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTDSLGS*HPSSGS
Trigger: TGATCCTGAAGAAGGATGCCATGAGCCTAGTGAATC...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGGATTCACTAGGCTCATaGCATCCTTCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEDSLGS*HPSSGS
Trigger: TGATCCTGAAGAAGGATGCCATGAGCCTAGTGAATC...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGCAGTGGATCAGACTGTaGTCCAGGGGATTCACTAGG +
Preference number: 4 (lower is better)
Translates to: AINRRWTRIGGTGREGFKQWIRL*SRGFTR
Trigger: CCTAGTGAATCCCCTGGACCACAGTCTGATCCACTG...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGCACTGGCAATGGCCTTaGCAGGGACATCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: AINRRWTRIGGTGREGFKHWQWP*QGHHSK
Trigger: TTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTG...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCATGTTCCGGAAGCATGTaGGAGCACAGAAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: DPEPTSPAFPDKFRAYGACSGSM*EHRRES
Trigger: TGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACA...TGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAGCTGGATACAGTTATTaGCTGCAATACTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRAGYSY*LQYCSS
Trigger: GGAAGAGCAGTATTGCAGTCAATAACTGTATCCAGC...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGGCTGGATACAGTTATTaGCTGCAATACTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: VTEVEPTVQGWTGARNTRAGYSY*LQYCSS
Trigger: GGAAGAGCAGTATTGCAGTCAATAACTGTATCCAGC...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp CATGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTGCTGGATACAGTTATTaGCTGCAATACTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HAHGLGDWQCPHIQCLVLAGYSY*LQYCSS
Trigger: GGAAGAGCAGTATTGCAGTCAATAACTGTATCCAGC...AAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp TATCTTTGTCACTTGCCACAAAAGCGAAGTCCCTGTCACTGTTCCGGAAGCATGAGTGCCTCGTACTTCTaGGCAGCTTGGCTTACCGCA +
Preference number: 4 (lower is better)
Translates to: YLCHLPQKRSPCHCSGSMSASYF*AAWLTA
Trigger: TGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACT...CATGCTTCCGGAACAGTGACAGGGACTTCGCTTTTGTGGCAAGTGACAAAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp ACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAAGACACTTCTGGTACTaGACCATACAGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: TSPAFPDKFRAYGAERVSRHFWY*TIQAAC
Trigger: GCAGGCTGCCTGTATGGTTCAGTACCAGAAGTGTCT...TGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAACAGGCTATAGGCCTTaGGGAATAAAACGGTACAGA +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRTGYRP*GIKRYR
Trigger: TCTGTACCGTTTTATTCCTCAAGGCCTATAGCCTGT...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGGCTATAAAGTGTTACTaGGGTAGAGCCAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKAIKCY*GRANCP
Trigger: TGGACAGTTGGCTCTACCTCAGTAACACTTTATAGC...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAGCTATAAAGTGTTACTaGGGTAGAGCCAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRAIKCY*GRANCP
Trigger: TGGACAGTTGGCTCTACCTCAGTAACACTTTATAGC...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATCCAGTAGTAAGTACCTaGAGCATCGTGGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNPVVST*SIVDLP
Trigger: AGGAAGATCCACGATGCTGCAGGTACTTACTACTGG...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCCCAGTAGTAAGTACCTaGAGCATCGTGGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFPVVST*SIVDLP
Trigger: AGGAAGATCCACGATGCTGCAGGTACTTACTACTGG...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGGATACAGTTATTGACTaGAATACTGCTCTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: VTEVEPTVQGWTGARNTRDTVID*NTALPR
Trigger: CCGGGGAAGAGCAGTATTGCAGTCAATAACTGTATC...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAACCCCACACACGGATGTaGACCAGAGGCTGGCAGTGG +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKPHTRM*TRGWQW
Trigger: CCACTGCCAGCCTCTGGTGCACATCCGTGTGTGGGG...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000511896.5
CDS-3UTR GCA 90 bp AGCCCATGTAGGGCACTGGCAATGGCCTTGGCAGGGACATCACAGCAAAACACAGCTATCTTTGTCACTTaGCACAAAAGCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SPCRALAMALAGTSQQNTAIFVT*HKSEVP
Trigger: AGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC...TGTGTTTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTACATGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGTGTCCCCATATACAGTaGCTCGTACTTCTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: AINRRWTRIGGTGREGFKCPHIQ*LVLLSS
Trigger: GCTGCTCAGAAGTACGAGGCACTGTATATGGGGACA...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp CTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGTACGTTGTGGTGCAGTaGCTCCCAGTCATCCGTATA +
Preference number: 4 (lower is better)
Translates to: LPQPSQISLGHMEQRGFQYVVVQ*LPVIRI
Trigger: TATACGGATGACTGGGAGGCACTGCACCACAACGTA...CTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAAGTCTGGATCCCCGAATaGTTGCGTGTTTCCGTGTGT +
Preference number: 4 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKVWIPE*LRVSVC
Trigger: ACACACGGAAACACGCAACCATTCGGGGATCCAGAC...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR CCA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGAAAGCACTTAGCCCCTaGCTCCATGCTCTGGATGTA +
Preference number: 4 (lower is better)
Translates to: AINRRWTRIGGTGREGFKKALSP*LHALDV
Trigger: TACATCCAGAGCATGGAGCCAGGGGCTAAGTGCTTT...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGGATTCACTAGGCTCATaGCATCCTTCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKDSLGS*HPSSGS
Trigger: TGATCCTGAAGAAGGATGCCATGAGCCTAGTGAATC...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAACGCTCTGACAAGATCTaGGCACAAAGCCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKRSDKI*AQSPCR
Trigger: CCTACATGGGCTTTGTGCCCAGATCTTGTCAGAGCG...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp AGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGACATGGCCTTGGTGACTaGCAGTGTCCCCATATACAG +
Preference number: 4 (lower is better)
Translates to: RAYGAERVSAGRHQEKRRHGLGD*QCPHIQ
Trigger: CTGTATATGGGGACACTGCCAGTCACCAAGGCCATG...TCTTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAGGGCAGGGGACCTCCTaGGGAATCCATGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKGQGTS*GIHGAG
Trigger: ACCAGCTCCATGGATTCCCCAGGAGGTCCCCTGCCC...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGCAATAAATAGACGGTaGACAAGGATCGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPAINRR*TRIGGT
Trigger: TGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCGCAATAAATAGACGGTaGACAAGGATCGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: WAINRRWTRIGGTGREGFAINRR*TRIGGT
Trigger: TGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGCTGGATACAGTTATTaGCTGCAATACTGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPAGYSY*LQYCSS
Trigger: GGAAGAGCAGTATTGCAGTCAATAACTGTATCCAGC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGAAAACACATGGCACTTaGGCATACAGCTATCTTTGT +
Preference number: 4 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKKTHGT*AYSYLC
Trigger: ACAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTT...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGAAAACACATGGCACTTaGGCATACAGCTATCTTTGT +
Preference number: 4 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEKTHGT*AYSYLC
Trigger: ACAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTT...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp TTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAAGACACTTCTGGTACTaGACCATACAGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LGHMEQRGFQPEGIKKRERHFWY*TIQAAC
Trigger: GCAGGCTGCCTGTATGGTTCAGTACCAGAAGTGTCT...TTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGACAGGCTATAGGCCTTaGGGAATAAAACGGTACAGA +
Preference number: 4 (lower is better)
Translates to: AFPDKFRAYGAERVSAGRTGYRP*GIKRYR
Trigger: TCTGTACCGTTTTATTCCTCAAGGCCTATAGCCTGT...CCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATGATACAGTTATTGACTaGAATACTGCTCTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNDTVID*NTALPR
Trigger: CCGGGGAAGAGCAGTATTGCAGTCAATAACTGTATC...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATGATACAGTTATTGACTaGAATACTGCTCTTCCCCGG +
Preference number: 4 (lower is better)
Translates to: AVSPYTVPRTSEQLGLPHDTVID*NTALPR
Trigger: CCGGGGAAGAGCAGTATTGCAGTCAATAACTGTATC...ATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGACACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGGCTATCTTTGTCACTTaGCACAAAAGCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: AFPDKFRAYGAERVSAGRAIFVT*HKSEVP
Trigger: AGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC...CCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAAGGCGCACAGGGCACTaGCACAATGGCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKRRTGH*HNGSSS
Trigger: AGAGGAGGAGCCATTGTGGCAGTGCCCTGTGCGCCT...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAACAGTGGATCAGACTGTaGTCCAGGGGATTCACTAGG +
Preference number: 4 (lower is better)
Translates to: LGHMEQRGFQPEGIKKREQWIRL*SRGFTR
Trigger: CCTAGTGAATCCCCTGGACCACAGTCTGATCCACTG...TTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp TTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAACATGGCCTTGGTGACTaGCAGTGTCCCCATATACAG +
Preference number: 4 (lower is better)
Translates to: LGHMEQRGFQPEGIKKREHGLGD*QCPHIQ
Trigger: CTGTATATGGGGACACTGCCAGTCACCAAGGCCATG...TTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGGCAATAAATAGACGGTaGACAAGGATCGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: AINRRWTRIGGTGREGFKAINRR*TRIGGT
Trigger: TGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAAACTCATCAGGCGCCTaGAGACCGACACGCCGAACA +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKNSSGA*RPTRRT
Trigger: TGTTCGGCGTGTCGGTCTTCAGGCGCCTGATGAGTT...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR GCA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAACCAGTAGTAAGTACCTaGAGCATCGTGGATCTTCCT +
Preference number: 4 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKPVVST*SIVDLP
Trigger: AGGAAGATCCACGATGCTGCAGGTACTTACTACTGG...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAATTCAGAGAGTCCCCCTaGATGGGGCTGGCACCAGAA +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKFRESP*MGLAPE
Trigger: TTCTGGTGCCAGCCCCATGCAGGGGGACTCTCTGAA...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp CTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGGATTCACTAGGCTCATaGCATCCTTCTTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: LPQPSQISLGHMEQRGFQDSLGS*HPSSGS
Trigger: TGATCCTGAAGAAGGATGCCATGAGCCTAGTGAATC...CTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAGTAGGGCACTGGCAATaGCCTTGGCAGGGACATCAC +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKVGHWQ*PWQGHH
Trigger: GTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTAC...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAGAGGCCAAAGGTGTGTaGGTCGCGGCCAACACCAAT +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKEAKGV*VAANTN
Trigger: ATTGGTGTTGGCCGCGACCCACACACCTTTGGCCTC...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp ACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCAATAAATAGACGGTaGACAAGGATCGGAGGGACA +
Preference number: 4 (lower is better)
Translates to: TSPAFPDKFRAYGAERVSAINRR*TRIGGT
Trigger: TGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC...TGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAACAGGGTCCTACGTTGTaGTGCAGTGCCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKQGPTL*CSASQS
Trigger: TGACTGGGAGGCACTGCACCACAACGTAGGACCCTG...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp TATCTTTGTCACTTGCCACAAAAGCGAAGTCCCTGTCACTGTTCCGGAAGCATGTGTTCCGGAAGCATGTaGGAGCACAGAAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: YLCHLPQKRSPCHCSGSMCSGSM*EHRRES
Trigger: TGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACA...CATGCTTCCGGAACAGTGACAGGGACTTCGCTTTTGTGGCAAGTGACAAAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAACCACCGCCCAACTATaGACTCATCAGGCGCCTGAA +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKTTAQL*THQAPE
Trigger: TTCAGGCGCCTGATGAGTTCATAGTTGGGCGGTGGT...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR TCA 90 bp TATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAGCTCCAAAAACACATGGCACTTaGGCATACAGCTATCTTTGT +
Preference number: 4 (lower is better)
Translates to: YTVPRTSEQLGLPHPAAPKTHGT*AYSYLC
Trigger: ACAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTT...TGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAAACAGGCTATAGGCCTTaGGGAATAAAACGGTACAGA +
Preference number: 4 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKTGYRP*GIKRYR
Trigger: TCTGTACCGTTTTATTCCTCAAGGCCTATAGCCTGT...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR TCA 90 bp ACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCTATAAAGTGTTACTaGGGTAGAGCCAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: TSPAFPDKFRAYGAERVSAIKCY*GRANCP
Trigger: TGGACAGTTGGCTCTACCTCAGTAACACTTTATAGC...TGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAGTACCTGCAGCATCGTaGATCTTCCTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKVPAAS*IFLQPG
Trigger: TCCTGGCTGGAGGAAGATCCACGATGCTGCAGGTAC...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAATCATCAGCATGTTCTaGCCCTCACCCCAGGCACCA +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKIISMF*PSPQAP
Trigger: TGGTGCCTGGGGTGAGGGCCAGAACATGCTGATGAT...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAAAGAGGCATCACCACTaGCCTCTACTCGCTCTGACA +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKKRHHH*PLLALT
Trigger: TGTCAGAGCGAGTAGAGGTCAGTGGTGATGCCTCTT...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAAGACACTTCTGGTACTaGACCATACAGGCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKRHFWY*TIQAAC
Trigger: GCAGGCTGCCTGTATGGTTCAGTACCAGAAGTGTCT...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAACTGGGTGCTACCGCTaGGTACATGCCAGTAGTAAG +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKTGCYR*VHASSK
Trigger: CTTACTACTGGCATGTACCCAGCGGTAGCACCCAGT...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAACACTGGCAATGGCCTTaGCAGGGACATCACAGCAAA +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKHWQWP*QGHHSK
Trigger: TTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTG...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAACGCTCTGACAAGATCTaGGCACAAAGCCCATGTAGG +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKRSDKI*AQSPCR
Trigger: CCTACATGGGCTTTGTGCCCAGATCTTGTCAGAGCG...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR GCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAATGCCTGAATGGGGTGTaGAGTCATGAGAGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKCLNGV*SHERVR
Trigger: TCTGACTCTCTCATGACTGCACACCCCATTCAGGCA...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAGCTATAAAGTGTTACTaGGGTAGAGCCAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKAIKCY*GRANCP
Trigger: TGGACAGTTGGCTCTACCTCAGTAACACTTTATAGC...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR GCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAGCTATCTTTGTCACTTaGCACAAAAGCGAAGTCCCT +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKAIFVT*HKSEVP
Trigger: AGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR TCA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAAAAACACATGGCACTTaGGCATACAGCTATCTTTGT +
Preference number: 4 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKKTHGT*AYSYLC
Trigger: ACAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTT...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS GCA 90 bp CGGCCCGCACTCTCAGCCCAGCGCGACCTCTGGAGCTACTGCGCCTaGAAGCCCAGCCTCTCTGCGCCGCAGGCTGCGGGGCCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: RPALSAQRDLWSYCA*KPSLSAPQAAGPAG
Trigger: GCCAGCTGGCCCCGCAGCCTGCGGCGCAGAGAGGCTGGGCTTGCAGGCGCAGTAGCTCCAGAGGTCGCGCTGGGCTGAGAGTGCGGGCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000503850.1
ENST00000506165.1
ENST00000506958.5
ENST00000510241.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTATGGAGCTGGTCCGCTaGAGCCGCAGGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: GAGPLEPQAGTGLGTPGLMELVR*SRRRAR
Trigger: CCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCAT...AAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCTCGACCCGCTTTCGAGGGGTaGCCCCTGCACCGCCAACCC +
Preference number: 5 (lower is better)
Translates to: VRLSRRRARAWAPQALPRPAFEG*PLHRQP
Trigger: GGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGGG...TCGAGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS GCA 90 bp CTGGAGCTACTGCGCCTGCAAGCCCAGCCTCTCTGCGCCGCAGGCTaGGGGGCCAGCTGGCGCCGCACAAATACGGGGCGGGACACGGGG +
Preference number: 5 (lower is better)
Translates to: LELLRLQAQPLCAAG*GASWRRTNTGRDTG
Trigger: CCCCGTGTCCCGCCCCGTATTTGTGCGGCGCCAGCTGGCCCCGCAGCCTGCGGCGCAGAGAGGCTGGGCTTGCAGGCGCAGTAGCTCCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000506958.5
ENST00000510241.5
CDS GCA 90 bp CTCTGCCGGCCCGCACTCTCAGCCCAGCGCGACCTCTGGAGCTACTaGGCCTGCAAGCCCAGCCTCTCTGCGCCGCAGGCTGCGGGGCCA +
Preference number: 5 (lower is better)
Translates to: LCRPALSAQRDLWSY*ACKPSLSAPQAAGP
Trigger: TGGCCCCGCAGCCTGCGGCGCAGAGAGGCTGGGCTTGCAGGCGCAGTAGCTCCAGAGGTCGCGCTGGGCTGAGAGTGCGGGCCGGCAGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000503850.1
ENST00000506165.1
ENST00000506958.5
ENST00000510241.5
ENST00000511896.5
CDS CCA 90 bp CCCGCCAGCCTCTGCCGGCCCGCACTCTCAGCCCAGCGCGACCTCTaGAGCTACTGCGCCTGCAAGCCCAGCCTCTCTGCGCCGCAGGCT +
Preference number: 5 (lower is better)
Translates to: PASLCRPALSAQRDL*SYCACKPSLSAPQA
Trigger: AGCCTGCGGCGCAGAGAGGCTGGGCTTGCAGGCGCAGTAGCTCCAGAGGTCGCGCTGGGCTGAGAGTGCGGGCCGGCAGAGGCTGGCGGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000503850.1
ENST00000506165.1
ENST00000506958.5
ENST00000510241.5
ENST00000511896.5
CDS GCA 90 bp CCAGCGCGACCTCTGGAGCTACTGCGCCTGCAAGCCCAGCCTCTCTaGGCCGCAGGCTGCGGGGCCAGCTGGCGCCGCACAAATACGGGG +
Preference number: 5 (lower is better)
Translates to: PARPLELLRLQAQPL*AAGCGASWRRTNTG
Trigger: CCCCGTATTTGTGCGGCGCCAGCTGGCCCCGCAGCCTGCGGCGCAGAGAGGCTGGGCTTGCAGGCGCAGTAGCTCCAGAGGTCGCGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000503850.1
ENST00000506958.5
ENST00000510241.5
CDS-3UTR CAA 90 bp GTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCTCGACTCCTAGTTCCCAGGTaGGGCGCTGCCACTGGGTGC +
Preference number: 5 (lower is better)
Translates to: VRLSRRRARAWAPQALPRLLVPR*GAATGC
Trigger: GCACCCAGTGGCAGCGCCCAACCTGGGAACTAGGAG...TCGAGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCCCGCTTTCGAGGGGTaGCCCCTGCACCGCCAACCC +
Preference number: 5 (lower is better)
Translates to: ESMELVRLSRRRARAWAPPAFEG*PLHRQP
Trigger: GGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGGG...GGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp CTGCATGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGGTTGGGCACCCCAGGCCTaGCCTCGAGCTGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LHGAGTRRLRTGSSDGPGWAPQA*PRAAEA
Trigger: GGCCTCTGCAGCTCGAGGCAAGGCCTGGGGTGCCCA...ACCTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp CCTGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGAGCCAGGGTCCTACGTaGTGGTGCAGTGCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: PGESMELVRLSRRRARAWSQGPT*WCSASQ
Trigger: CTGGGAGGCACTGCACCACAACGTAGGACCCTGGCT...CCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp GCTCTGACGGCCCAGGTCAGCGATGAGGCCAAAGGTGTGTGGGTCGCGGCCAACCTCCTAGTTCCCAGGTaGGGCGCTGCCACTGGGTGC +
Preference number: 5 (lower is better)
Translates to: ALTAQVSDEAKGVWVAANLLVPR*GAATGC
Trigger: GCACCCAGTGGCAGCGCCCAACCTGGGAACTAGGAG...GTTGGCCGCGACCCACACACCTTTGGCCTCATCGCTGACCTGGGCCGTCAGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp CTGCATGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGGTCTCCTAGTTCCCAGGTaGGGCGCTGCCACTGGGTGC +
Preference number: 5 (lower is better)
Translates to: LHGAGTRRLRTGSSDGPGLLVPR*GAATGC
Trigger: GCACCCAGTGGCAGCGCCCAACCTGGGAACTAGGAG...ACCTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp TGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCGTACTTCTGAGCAGCTaGGCTTACCGCATCCAGCAG +
Preference number: 5 (lower is better)
Translates to: WGIHGAGPLEPQAGTGLGVLLSS*AYRIQQ
Trigger: CTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTAC...GCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS CCA 90 bp GTAAACGGGCGTCTGGATCCCCGAATGGTTGCGTGTTTCCGTGTGTaGGTCCGGGGGAGGCCCACGAACGCCAGCGAAACCGCTGACACC +
Preference number: 5 (lower is better)
Translates to: VNGRLDPRMVACFRV*VRGRPTNASETADT
Trigger: GGTGTCAGCGGTTTCGCTGGCGTTCGTGGGCCTCCCCCGGACCCACACACGGAAACACGCAACCATTCGGGGATCCAGACGCCCGTTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000510241.5
CDS CCA 90 bp AGCCCCAGAGTAGCCTTTCGGATTCCCTCGTCCTCCCTCAGCTCCTaGTCTTCCCACCGGGCCCCTCCGTGCACACCATCGCAGTTGACC +
Preference number: 5 (lower is better)
Translates to: SPRVAFRIPSSSLSS*SSHRAPPCTPSQLT
Trigger: GGTCAACTGCGATGGTGTGCACGGAGGGGCCCGGTGGGAAGACCAGGAGCTGAGGGAGGACGAGGGAATCCGAAAGGCTACTCTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506958.5
ENST00000510241.5
CDS-3UTR CAA 90 bp GTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTGCCTCGAAGCTATCTTTGTCACTaGCCACAAAAGCGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: VRLSRRRARAWAPQALPRSYLCH*PQKRSP
Trigger: GGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCT...TCGAGGCAAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GGATCAGCATCAGTGGGGATCACAGCCTGCAGCCGGGAGGGAGAAGTAGCTCTTTGGGCACCCCAGGCCTaGCCTCGAGCTGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: GSASVGITACSREGEVALWAPQA*PRAAEA
Trigger: GGCCTCTGCAGCTCGAGGCAAGGCCTGGGGTGCCCA...AAGAGCTACTTCTCCCTCCCGGCTGCAGGCTGTGATCCCCACTGATGCTGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR CAA 90 bp CACCTGTCACTGTTCCGGAAGCATGTGGGAGCACAGAAGGGAATCAGCCCAGCCATGGAGCTGGTCCGCTaGAGCCGCAGGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: HLSLFRKHVGAQKGISPAMELVR*SRRRAR
Trigger: CCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCAT...GGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACAGTGACAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS TCA 90 bp AGGCCCACGAACGCCAGCGAAACCGCTGACACCACCGCCCAACTATaGACTCATCAGGCGCCTGAAGACCGACACGCCGAACATGCGCCG +
Preference number: 5 (lower is better)
Translates to: RPTNASETADTTAQL*THQAPEDRHAEHAP
Trigger: CGGCGCATGTTCGGCGTGTCGGTCTTCAGGCGCCTGATGAGTTCATAGTTGGGCGGTGGTGTCAGCGGTTTCGCTGGCGTTCGTGGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358580.9
CDS-3UTR CAA 90 bp GTTCAAGTACTGGGGATCAGCATCAGTGGGGATCACAGCCTGCAGCCGGGAGGGCTCCTAGTTCCCAGGTaGGGCGCTGCCACTGGGTGC +
Preference number: 5 (lower is better)
Translates to: VQVLGISISGDHSLQPGGLLVPR*GAATGC
Trigger: GCACCCAGTGGCAGCGCCCAACCTGGGAACTAGGAG...CCCTCCCGGCTGCAGGCTGTGATCCCCACTGATGCTGATCCCCAGTACTTGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR CAA 90 bp GAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGATGGAGCTGGTCCGCTaGAGCCGCAGGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: EPTVQGWTGARNTRTQGKMELVR*SRRRAR
Trigger: CCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCAT...CTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp AGTCATGAGAGAGTCAGACACACTGAGCATGGTGGGGACCCAGGCATTCCGGTCATGGAGCTGGTCCGCTaGAGCCGCAGGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: SHERVRHTEHGGDPGIPVMELVR*SRRRAR
Trigger: CCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCAT...GACCGGAATGCCTGGGTCCCCACCATGCTCAGTGTGTCTGACTCTCTCATGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp CAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGACCCGCTTTCGAGGGGTaGCCCCTGCACCGCCAACCC +
Preference number: 5 (lower is better)
Translates to: QLSRVGQGQGTQGPKERGPAFEG*PLHRQP
Trigger: GGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGGG...TCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp GGGTCGCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTGCCACAATCCCGCTTTCGAGGGGTaGCCCCTGCACCGCCAACCC +
Preference number: 5 (lower is better)
Translates to: GSRPTPINVTRRTGHCHNPAFEG*PLHRQP
Trigger: GGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGGG...ATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGCGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS GCA 90 bp CAGGCACCATCTGGAGGCTGGCTCCGGCTGCGGGTCTGGGCCAGCTaGTGGATACAGTTATTGACTGCAATACTGCTCTTCCCCGGTGCC +
Preference number: 5 (lower is better)
Translates to: QAPSGGWLRLRVWAS*WIQLLTAILLFPGA
Trigger: GGCACCGGGGAAGAGCAGTATTGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTCCAGATGGTGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503979.1
ENST00000505617.5
ENST00000506289.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511463.1
ENST00000511896.5
ENST00000513507.5
ENST00000515056.5
CDS GCA 90 bp GGTCCACACATGGGCTCAGACCTCCTCCTCACACTCTACCTACCGTaGCTGGGTCCTCTGCATCTCCTAGTTCCCAGGTTGGGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: GPHMGSDLLLTLYLP*LGPLHLLVPRLGAA
Trigger: GGCAGCGCCCAACCTGGGAACTAGGAGATGCAGAGGACCCAGGCACGGTAGGTAGAGTGTGAGGAGGAGGTCTGAGCCCATGTGTGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506165.1
ENST00000511459.1
CDS CCA 90 bp GCACCATCTGGAGGCTGGCTCCGGCTGCGGGTCTGGGCCAGCTGCTaGATACAGTTATTGACTGCAATACTGCTCTTCCCCGGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: APSGGWLRLRVWASC*IQLLTAILLFPGAR
Trigger: CCTGGCACCGGGGAAGAGCAGTATTGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTCCAGATGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503979.1
ENST00000505617.5
ENST00000506289.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511463.1
ENST00000511896.5
ENST00000513507.5
ENST00000515056.5
CDS-3UTR CAA 90 bp GGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGGCACCCCAGGCCTTTGCTGGATACAGTTATaGACTGCAATACTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GAGPLEPQAGTGLGTPGLCWIQL*TAILLF
Trigger: GAAGAGCAGTATTGCAGTCAATAACTGTATCCAGCA...AAGGCCTGGGGTGCCCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp TGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGACACCCCGCATGGAGCTGGTCCGCTaGAGCCGCAGGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: WSREGFSRKASRKEKTPRMELVR*SRRRAR
Trigger: CCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCAT...GCGGGGTGTCTTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGAGCCAGGGTCCTACGTaGTGGTGCAGTGCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: SRVGQGQGTQGPKERGARSQGPT*WCSASQ
Trigger: CTGGGAGGCACTGCACCACAACGTAGGACCCTGGCT...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS CCA 90 bp CCCTCACCCCAGGCACCATCTGGAGGCTGGCTCCGGCTGCGGGTCTaGGCCAGCTGCTGGATACAGTTATTGACTGCAATACTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PSPQAPSGGWLRLRV*ASCWIQLLTAILLF
Trigger: GAAGAGCAGTATTGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTCCAGATGGTGCCTGGGGTGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503979.1
ENST00000505617.5
ENST00000506289.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511463.1
ENST00000511896.5
ENST00000513507.5
ENST00000515056.5
CDS CCA 90 bp ATCATCAGCATGTTCTGGCCCTCACCCCAGGCACCATCTGGAGGCTaGCTCCGGCTGCGGGTCTGGGCCAGCTGCTGGATACAGTTATTG +
Preference number: 5 (lower is better)
Translates to: IISMFWPSPQAPSGG*LRLRVWASCWIQLL
Trigger: CAATAACTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTCCAGATGGTGCCTGGGGTGAGGGCCAGAACATGCTGATGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503979.1
ENST00000505617.5
ENST00000506289.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511463.1
ENST00000511896.5
ENST00000513507.5
ENST00000515056.5
CDS-3UTR CAA 90 bp GGAGAGATGGGGTCTGGGGAGCAGCAAGAGGCATCACCACTGACCTCTACTCGCATCCAGCAGCTCCACTaGCCGTGGCAGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GEMGSGEQQEASPLTSTRIQQLH*PWQVFR
Trigger: CCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGAT...GCGAGTAGAGGTCAGTGGTGATGCCTCTTGCTGCTCCCCAGACCCCATCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCTGGGCACCCCAGGCCTaGCCTCGAGCTGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: WAINRRWTRIGGTGREGFWAPQA*PRAAEA
Trigger: GGCCTCTGCAGCTCGAGGCAAGGCCTGGGGTGCCCA...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS GCA 90 bp GGGTCGCGGCCAACACCAATAAATGTCACAAGGCGCACAGGGCACTaGCACAATGGCTCCTCCTCTGTACTGGCCTCTGCCCATGGCCTT +
Preference number: 5 (lower is better)
Translates to: GSRPTPINVTRRTGH*HNGSSSVLASAHGL
Trigger: AAGGCCATGGGCAGAGGCCAGTACAGAGGAGGAGCCATTGTGGCAGTGCCCTGTGCGCCTTGTGACATTTATTGGTGTTGGCCGCGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358580.9
ENST00000511201.2
CDS-3UTR CAA 90 bp CCCTGCATGGGGCTGGCACCAGAAGGCTGCGCACTGGAAGCTCTGACGGCCCAGAGCTATCTTTGTCACTaGCCACAAAAGCGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: PCMGLAPEGCALEALTAQSYLCH*PQKRSP
Trigger: GGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCT...CTGGGCCGTCAGAGCTTCCAGTGCGCAGCCTTCTGGTGCCAGCCCCATGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp CCTGGGGAATCCATGGAGCTGGTCCGCTTGAGCCGCAGGCGGGCACGGGCCTGGCAAAACACATGGCACTaGAGCATACAGCTATCTTTG +
Preference number: 5 (lower is better)
Translates to: PGESMELVRLSRRRARAWQNTWH*SIQLSL
Trigger: CAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTTG...CCAGGCCCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCATGGATTCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGATGGAGCTGGTCCGCTaGAGCCGCAGGCGGGCACGG +
Preference number: 5 (lower is better)
Translates to: AINRRWTRIGGTGREGFKMELVR*SRRRAR
Trigger: CCGTGCCCGCCTGCGGCTCAAGCGGACCAGCTCCAT...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS GCA 90 bp GGTCCTCTGCATCTCCTAGTTCCCAGGTTGGGCGCTGCCACTGGGTaGTACCGCTGGGTACATGCCAGTAGTAAGTACCTGCAGCATCGT +
Preference number: 5 (lower is better)
Translates to: GPLHLLVPRLGAATG*YRWVHASSKYLQHR
Trigger: ACGATGCTGCAGGTACTTACTACTGGCATGTACCCAGCGGTAGCACCCAGTGGCAGCGCCCAACCTGGGAACTAGGAGATGCAGAGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503850.1
ENST00000505617.5
ENST00000506165.1
ENST00000506289.5
ENST00000506958.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511459.1
ENST00000511896.5
ENST00000513507.5
CDS GCA 90 bp GCCTCTGCCCATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTaGCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: ASAHGLGDWQCPHIQ*LVLLSSLAYRIQQL
Trigger: GAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATGGGCAGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358580.9
ENST00000511201.2
CDS CCA 90 bp TGGGACCTCCCAATGCCCTCAGGCCCAAGTCACTACCTTAGCCCCTaGCTCCATGCTCTGGATGTAGGATTCCCCACCATACCAGGACAG +
Preference number: 5 (lower is better)
Translates to: WDLPMPSGPSHYLSP*LHALDVGFPTIPGQ
Trigger: CTGTCCTGGTATGGTGGGGAATCCTACATCCAGAGCATGGAGCCAGGGGCTAAGGTAGTGACTTGGGCCTGAGGGCATTGGGAGGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503979.1
CDS-3UTR CAA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCCTCCTAGTTCCCAGGTaGGGCGCTGCCACTGGGTGC +
Preference number: 5 (lower is better)
Translates to: WAINRRWTRIGGTGREGFLLVPR*GAATGC
Trigger: GCACCCAGTGGCAGCGCCCAACCTGGGAACTAGGAG...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATCCTCTGCCCATGGCCTaGGTGACTGGCAGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNPLPMA*VTGSVP
Trigger: GGGGACACTGCCAGTCACCAAGGCCATGGGCAGAGG...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358580.9
CDS-3UTR CAA 90 bp ACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCACCCGCTTTCGAGGGGTaGCCCCTGCACCGCCAACCC +
Preference number: 5 (lower is better)
Translates to: TSPAFPDKFRAYGAERVSPAFEG*PLHRQP
Trigger: GGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGGG...TGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS GCA 90 bp TGTTCAGTCCAATCCCACCCTTGTCTTTCCCTTGGGACCTCCCAATaGCCTCAGGCCCAAGTCACTACCTTAGCCCCTGGCTCCATGCTC +
Preference number: 5 (lower is better)
Translates to: CSVQSHPCLSLGTSQ*PQAQVTTLAPGSML
Trigger: GAGCATGGAGCCAGGGGCTAAGGTAGTGACTTGGGCCTGAGGGCATTGGGAGGTCCCAAGGGAAAGACAAGGGTGGGATTGGACTGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503979.1
CDS CCA 90 bp CATCTCCTAGTTCCCAGGTTGGGCGCTGCCACTGGGTGCTACCGCTaGGTACATGCCAGTAGTAAGTACCTGCAGCATCGTGGATCTTCC +
Preference number: 5 (lower is better)
Translates to: HLLVPRLGAATGCYR*VHASSKYLQHRGSS
Trigger: GGAAGATCCACGATGCTGCAGGTACTTACTACTGGCATGTACCCAGCGGTAGCACCCAGTGGCAGCGCCCAACCTGGGAACTAGGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503850.1
ENST00000505617.5
ENST00000506165.1
ENST00000506289.5
ENST00000506958.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511459.1
ENST00000511896.5
ENST00000513507.5
CDS CCA 90 bp CCCCACACACGGATGTGCACCAGAGGCTGGCAGTGGATCAGACTGTaGTCCAGGGGATTCACTAGGCTCATGGCATCCTTCTTCAGGATC +
Preference number: 5 (lower is better)
Translates to: PHTRMCTRGWQWIRL*SRGFTRLMASFFRI
Trigger: GATCCTGAAGAAGGATGCCATGAGCCTAGTGAATCCCCTGGACCACAGTCTGATCCACTGCCAGCCTCTGGTGCACATCCGTGTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503979.1
ENST00000506289.5
ENST00000510241.5
ENST00000511201.2
ENST00000511463.1
ENST00000511896.5
ENST00000513507.5
ENST00000515056.5
CDS-3UTR CAA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGATCCAGCAGCTCCACTaGCCGTGGCAGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKIQQLH*PWQVFR
Trigger: CCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGAT...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp CATGTAGGGCACTGGCAATGGCCTTGGCAGGGACATCACAGCAAAACACATGGCATCCAGCAGCTCCACTaGCCGTGGCAGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: HVGHWQWPWQGHHSKTHGIQQLH*PWQVFR
Trigger: CCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGAT...GCCATGTGTTTTGCTGTGATGTCCCTGCCAAGGCCATTGCCAGTGCCCTACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GTCACTGTTCCGGAAGCATGTGGGAGCACAGAAGGGAATCAGCCCAGCCTCTCGGTACTTCTGAGCAGCTaGGCTTACCGCATCCAGCAG +
Preference number: 5 (lower is better)
Translates to: VTVPEACGSTEGNQPSLSVLLSS*AYRIQQ
Trigger: CTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTAC...CGAGAGGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp TTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAATGGGCACCCCAGGCCTaGCCTCGAGCTGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: LGHMEQRGFQPEGIKKREWAPQA*PRAAEA
Trigger: GGCCTCTGCAGCTCGAGGCAAGGCCTGGGGTGCCCA...TTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGCCAGGGTCCTACGTaGTGGTGCAGTGCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPSQGPT*WCSASQ
Trigger: CTGGGAGGCACTGCACCACAACGTAGGACCCTGGCT...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp TTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTTTAGGGCAAGCCAGGGTCCTACGTaGTGGTGCAGTGCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: LGMDPEPTSPAFPDKFRASQGPT*WCSASQ
Trigger: CTGGGAGGCACTGCACCACAACGTAGGACCCTGGCT...TGCCCTAAACTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS CCA 90 bp GCATCAGTGGGGATCACAGCCAGAGGCTGGCAGTGGATCAGACTGTaGTCCAGGGGATTCACTAGGCTCATGGCATCCTTCTTCAGGATC +
Preference number: 5 (lower is better)
Translates to: ASVGITARGWQWIRL*SRGFTRLMASFFRI
Trigger: GATCCTGAAGAAGGATGCCATGAGCCTAGTGAATCCCCTGGACCACAGTCTGATCCACTGCCAGCCTCTGGCTGTGATCCCCACTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509914.5
CDS-3UTR CAA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGTGGATCCCCGAATGGTaGCGTGTTTCCGTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKWIPEW*RVSVCG
Trigger: CCCACACACGGAAACACGCAACCATTCGGGGATCCA...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR CAA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGTGGATCCCCGAATGGTaGCGTGTTTCCGTGTGTGGG +
Preference number: 5 (lower is better)
Translates to: VTEVEPTVQGWTGARNTRWIPEW*RVSVCG
Trigger: CCCACACACGGAAACACGCAACCATTCGGGGATCCA...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS-3UTR CAA 90 bp TCCCCATATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAATCCAGCAGCTCCACTaGCCGTGGCAGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SPYTVPRTSEQLGLPHPAIQQLH*PWQVFR
Trigger: CCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGAT...TGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGAGCTATCTTTGTCACTaGCCACAAAAGCGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: SRVGQGQGTQGPKERGARSYLCH*PQKRSP
Trigger: GGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCT...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp GCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCAAGATCCAGCAGCTCCACTaGCCGTGGCAGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: AINRRWTRIGGTGREGFKIQQLH*PWQVFR
Trigger: CCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGAT...CTTGAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp CTTCCCCAGCCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGATCCAGCAGCTCCACTaGCCGTGGCAGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LPQPSQISLGHMEQRGFQIQQLH*PWQVFR
Trigger: CCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGAT...CTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGGCTGGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp AAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGAGTACTTCTGAGCAGCTaGGCTTACCGCATCCAGCAG +
Preference number: 5 (lower is better)
Translates to: KRYRVRHGPRAYFPSLPRVLLSS*AYRIQQ
Trigger: CTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTAC...TCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGTCATCATCGCAGTaGACCAGAATGATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VEPTVQGWTGARNTRTQGKSSSQ*TRMMAS
Trigger: GCTGGCCATCATTCTGGTCAACTGCGATGATGACTT...TCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCAAGTCATCATCGCAGTaGACCAGAATGATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTKSSSQ*TRMMAS
Trigger: GCTGGCCATCATTCTGGTCAACTGCGATGATGACTT...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAAATCCAGCAGCTCCACTaGCCGTGGCAGGTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKIQQLH*PWQVFR
Trigger: CCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGAT...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp TGGGCAATAAATAGACGGTGGACAAGGATCGGAGGGACAGGCAGAGAAGGCTTCGTACTTCTGAGCAGCTaGGCTTACCGCATCCAGCAG +
Preference number: 5 (lower is better)
Translates to: WAINRRWTRIGGTGREGFVLLSS*AYRIQQ
Trigger: CTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTAC...GAAGCCTTCTCTGCCTGTCCCTCCGATCCTTGTCCACCGTCTATTTATTGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCGTACTTCTGAGCAGCTaGGCTTACCGCATCCAGCAG +
Preference number: 5 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPVLLSS*AYRIQQ
Trigger: CTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTAC...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp TATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAGCTCCAGTACTTCTGAGCAGCTaGGCTTACCGCATCCAGCAG +
Preference number: 5 (lower is better)
Translates to: YTVPRTSEQLGLPHPAAPVLLSS*AYRIQQ
Trigger: CTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTAC...TGGAGCTGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAATGGGCACCCCAGGCCTaGCCTCGAGCTGCAGAGGCC +
Preference number: 5 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKWAPQA*PRAAEA
Trigger: GGCCTCTGCAGCTCGAGGCAAGGCCTGGGGTGCCCA...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAACCCGCTTTCGAGGGGTaGCCCCTGCACCGCCAACCC +
Preference number: 5 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKPAFEG*PLHRQP
Trigger: GGGTTGGCGGTGCAGGGGCAACCCCTCGAAAGCGGG...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCAGCTATCTTTGTCACTaGCCACAAAAGCGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTSYLCH*PQKRSP
Trigger: GGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCT...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp CACTCACCTGTCACTGTTCCGGAAGCATGTGGGAGCACAGAAGGGAATCAGCCCAGCTATCTTTGTCACTaGCCACAAAAGCGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: HSPVTVPEACGSTEGNQPSYLCH*PQKRSP
Trigger: GGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCT...GGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACAGTGACAGGTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR CAA 90 bp CACCTGTCACTGTTCCGGAAGCATGTGGGAGCACAGAAGGGAATCAGCCCAGCCAGCATACAGCTATCTTaGTCACTTGCCACAAAAGCG +
Preference number: 5 (lower is better)
Translates to: HLSLFRKHVGAQKGISPASIQLS*SLATKA
Trigger: CGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCT...GGCTGGGCTGATTCCCTTCTGTGCTCCCACATGCTTCCGGAACAGTGACAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS-3UTR CAA 90 bp TCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCCAGGCAAAACACATGGCACTaGAGCATACAGCTATCTTTG +
Preference number: 5 (lower is better)
Translates to: SRVGQGQGTQGPKERGARQNTWH*SIQLSL
Trigger: CAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTTG...CCTGGCTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp CAGCTTGGCTTACCGCATCCAGCAGCTCCACTTGCCGTGGCAGGTCTTCAGGAGCAAAACACATGGCACTaGAGCATACAGCTATCTTTG +
Preference number: 5 (lower is better)
Translates to: QLGLPHPAAPLAVAGLQEQNTWH*SIQLSL
Trigger: CAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTTG...CTCCTGAAGACCTGCCACGGCAAGTGGAGCTGCTGGATGCGGTAAGCCAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp TCCCCATATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATCCAGCAAGAAGTAGCTCTTGCTaGGGGGATGTAGGCATCCTC +
Preference number: 5 (lower is better)
Translates to: SPYTVPRTSEQLGLPHPARSSSC*GDVGIL
Trigger: GAGGATGCCTACATCCCCCAAGCAAGAGCTACTTCT...TGCTGGATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511896.5
CDS TCA 90 bp AGTAGGGTGGCAGGTGCCACAATACATACTCCCTGTCTTCACCCTTaGTCACCTCTGTTCAGTCCAATCCCACCCTTGTCTTTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: SRVAGATIHTPCLHP*SPLFSPIPPLSFPW
Trigger: CCAAGGGAAAGACAAGGGTGGGATTGGACTGAACAGAGGTGATCAAGGGTGAAGACAGGGAGTATGTATTGTGGCACCTGCCACCCTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503979.1
CDS-3UTR CAA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAACTCCTAGTTCCCAGGTaGGGCGCTGCCACTGGGTGC +
Preference number: 5 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKLLVPR*GAATGC
Trigger: GCACCCAGTGGCAGCGCCCAACCTGGGAACTAGGAG...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCAGATAAGAGCTATCTTTGTCACTaGCCACAAAAGCGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: GTELGMDPEPTSPAFPDKSYLCH*PQKRSP
Trigger: GGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCT...CTTATCTGGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCAGCATACAGCTATCTTaGTCACTTGCCACAAAAGCG +
Preference number: 5 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTSIQLS*SLATKA
Trigger: CGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCT...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp GTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAGCATACAGCTATCTTaGTCACTTGCCACAAAAGCG +
Preference number: 5 (lower is better)
Translates to: VEPTVQGWTGARNTRTQGSIQLS*SLATKA
Trigger: CGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCT...TCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS TCA 90 bp AAGAACCTGGGACAGAGCCAAGAACGTAACAGAACCCAAAACATGTaGCAGAATCCAGAACCTGGGCTGGAAAGCAGACCATGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: KNLGQSQERNRTQNM*QNPEPGLESRPWVQ
Trigger: CTGGACCCATGGTCTGCTTTCCAGCCCAGGTTCTGGATTCTGTCACATGTTTTGGGTTCTGTTACGTTCTTGGCTCTGTCCCAGGTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503850.1
ENST00000511459.1
CDS CCA 90 bp GACAGGTTGGGGGAAGGGACAGGAATTAATAAGGATGGAGTAGGGTaGCAGGTGCCACAATACATACTCCCTGTCTTCACCCTTGATCAC +
Preference number: 5 (lower is better)
Translates to: DRLGEGTGINKDGVG*QVPQYILPVFTLDH
Trigger: GTGATCAAGGGTGAAGACAGGGAGTATGTATTGTGGCACCTGCCACCCTACTCCATCCTTATTAATTCCTGTCCCTTCCCCCAACCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503979.1
CDS-3UTR CAA 90 bp CAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGATGCTGGATACAGTTATaGACTGCAATACTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: QLSRVGQGQGTQGPKERGCWIQL*TAILLF
Trigger: GAAGAGCAGTATTGCAGTCAATAACTGTATCCAGCA...TCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp ACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCTGCTGGATACAGTTATaGACTGCAATACTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: TEVEPTVQGWTGARNTRTCWIQL*TAILLF
Trigger: GAAGAGCAGTATTGCAGTCAATAACTGTATCCAGCA...GGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp TGGAGCAGAGAGGGTTTCAGCCGGAAGGCATCAAGAAAAGAGAAGACACCCCGCAGCATACAGCTATCTTaGTCACTTGCCACAAAAGCG +
Preference number: 5 (lower is better)
Translates to: WSREGFSRKASRKEKTPRSIQLS*SLATKA
Trigger: CGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCT...GCGGGGTGTCTTCTCTTTTCTTGATGCCTTCCGGCTGAAACCCTCTCTGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp AACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGACCCAAGGAAAGGGGAGCAAAACACATGGCACTaGAGCATACAGCTATCTTTG +
Preference number: 5 (lower is better)
Translates to: NCPGLDRGKEHKDPRKGEQNTWH*SIQLSL
Trigger: CAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTTG...CTCCCCTTTCCTTGGGTCCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp GTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAATTGGGCAATAAAAGCCAGGGTCCTACGTaGTGGTGCAGTGCCTCCCAG +
Preference number: 5 (lower is better)
Translates to: VVVQCLPVIRINNKLGNKSQGPT*WCSASQ
Trigger: CTGGGAGGCACTGCACCACAACGTAGGACCCTGGCT...TTTATTGCCCAATTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp CCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAAAAAGTCATCATCGCAGTaGACCAGAATGATGGCCAGC +
Preference number: 5 (lower is better)
Translates to: PGSYVVVQCLPVIRINNKKSSSQ*TRMMAS
Trigger: GCTGGCCATCATTCTGGTCAACTGCGATGATGACTT...TTTATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp GAGCCAGGGTCCTACGTTGTGGTGCAGTGCCTCCCAGTCATCCGTATAAACAATAGCATACAGCTATCTTaGTCACTTGCCACAAAAGCG +
Preference number: 5 (lower is better)
Translates to: EPGSYVVVQCLPVIRINNSIQLS*SLATKA
Trigger: CGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCT...ATTGTTTATACGGATGACTGGGAGGCACTGCACCACAACGTAGGACCCTGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp GCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCAGCTTGGCTTACCGCATAGCATACAGCTATCTTaGTCACTTGCCACAAAAGCG +
Preference number: 5 (lower is better)
Translates to: AVSPYTVPRTSEQLGLPHSIQLS*SLATKA
Trigger: CGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCT...ATGCGGTAAGCCAAGCTGCTCAGAAGTACGAGGCACTGTATATGGGGACACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GTTACTGAGGTAGAGCCAACTGTCCAGGGTTGGACAGGGGCAAGGAACACAAGGCAAAACACATGGCACTaGAGCATACAGCTATCTTTG +
Preference number: 5 (lower is better)
Translates to: VTEVEPTVQGWTGARNTRQNTWH*SIQLSL
Trigger: CAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTTG...CCTTGTGTTCCTTGCCCCTGTCCAACCCTGGACAGTTGGCTCTACCTCAGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp CATGGCCTTGGTGACTGGCAGTGTCCCCATATACAGTGCCTCGTACTTCTGAGCCAAAACACATGGCACTaGAGCATACAGCTATCTTTG +
Preference number: 5 (lower is better)
Translates to: HGLGDWQCPHIQCLVLLSQNTWH*SIQLSL
Trigger: CAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTTG...GCTCAGAAGTACGAGGCACTGTATATGGGGACACTGCCAGTCACCAAGGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp CCTTCCCAGATAAGTTTAGGGCATATGGAGCAGAGAGGGTTTCAGCCGGAAGGCTGCTGGATACAGTTATaGACTGCAATACTGCTCTTC +
Preference number: 5 (lower is better)
Translates to: PSQISLGHMEQRGFQPEGCWIQL*TAILLF
Trigger: GAAGAGCAGTATTGCAGTCAATAACTGTATCCAGCA...GCCTTCCGGCTGAAACCCTCTCTGCTCCATATGCCCTAAACTTATCTGGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GCTATCTTTGTCACTTGCCACAAAAGCGAAGTCCCTGTCACTGTTCCGGAAGCAAGCTATCTTTGTCACTaGCCACAAAAGCGAAGTCCC +
Preference number: 5 (lower is better)
Translates to: AIFVTCHKSEVPVTVPEASYLCH*PQKRSP
Trigger: GGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCT...TGCTTCCGGAACAGTGACAGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS-3UTR CAA 90 bp ATAAAACGGTACAGAGTTAGGCATGGACCCAGAGCCTACTTCCCCAGCCTTCCCCAAAACACATGGCACTaGAGCATACAGCTATCTTTG +
Preference number: 5 (lower is better)
Translates to: IKRYRVRHGPRAYFPSLPQNTWH*SIQLSL
Trigger: CAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTTG...GGGAAGGCTGGGGAAGTAGGCTCTGGGTCCATGCCTAACTCTGTACCGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000467078.5
ENST00000509914.5
ENST00000511896.5
CDS-3UTR CAA 90 bp GCTATCTTTGTCACTTGCCACAAAAGCGAAGTCCCTGTCACTGTTCCGGAAGCAAGCATACAGCTATCTTaGTCACTTGCCACAAAAGCG +
Preference number: 5 (lower is better)
Translates to: AIFVTCHKSEVPVTVPEASIQLS*SLATKA
Trigger: CGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCT...TGCTTCCGGAACAGTGACAGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467078.5
ENST00000509914.5
CDS GCA 72 bp CTGCGCCTGCAAGCCCAGCCTCTCTGCGCCGCAGGCTaGGGGGCCAGCTGGCGCCGCACAAATACGGGGCGG +
Preference number: 6 (lower is better)
Translates to: LRLQAQPLCAAG*GASWRRTNTGR
Trigger: CCGCCCCGTATTTGTGCGGCGCCAGCTGGCCCCGCAGCCTGCGGCGCAGAGAGGCTGGGCTTGCAGGCGCAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000503850.1
ENST00000506958.5
ENST00000510241.5
CDS GCA 72 bp CCCGCACTCTCAGCCCAGCGCGACCTCTGGAGCTACTaGGCCTGCAAGCCCAGCCTCTCTGCGCCGCAGGCT +
Preference number: 6 (lower is better)
Translates to: PALSAQRDLWSY*ACKPSLSAPQA
Trigger: AGCCTGCGGCGCAGAGAGGCTGGGCTTGCAGGCGCAGTAGCTCCAGAGGTCGCGCTGGGCTGAGAGTGCGGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000503850.1
ENST00000506165.1
ENST00000506958.5
ENST00000510241.5
ENST00000511896.5
CDS CCA 72 bp CTCTGCCGGCCCGCACTCTCAGCCCAGCGCGACCTCTaGAGCTACTGCGCCTGCAAGCCCAGCCTCTCTGCG +
Preference number: 6 (lower is better)
Translates to: LCRPALSAQRDL*SYCACKPSLSA
Trigger: CGCAGAGAGGCTGGGCTTGCAGGCGCAGTAGCTCCAGAGGTCGCGCTGGGCTGAGAGTGCGGGCCGGCAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000503850.1
ENST00000506165.1
ENST00000506958.5
ENST00000510241.5
ENST00000511896.5
CDS TCA 72 bp GGTCCGGGGGAGGCCCACGAACGCCAGCGAAACCGCTaGCACCACCGCCCAACTATGAACTCATCAGGCGCC +
Preference number: 6 (lower is better)
Translates to: GPGEAHERQRNR*HHRPTMNSSGA
Trigger: GGCGCCTGATGAGTTCATAGTTGGGCGGTGGTGTCAGCGGTTTCGCTGGCGTTCGTGGGCCTCCCCCGGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000510241.5
CDS CCA 72 bp ATGTTCTGGCCCTCACCCCAGGCACCATCTGGAGGCTaGCTCCGGCTGCGGGTCTGGGCCAGCTGCTGGATA +
Preference number: 6 (lower is better)
Translates to: MFWPSPQAPSGG*LRLRVWASCWI
Trigger: TATCCAGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTCCAGATGGTGCCTGGGGTGAGGGCCAGAACAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503979.1
ENST00000505617.5
ENST00000506289.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511463.1
ENST00000511896.5
ENST00000513507.5
ENST00000515056.5
CDS GCA 72 bp GGTGCGTGTAAACGGGCGTCTGGATCCCCGAATGGTTaGGTGTTTCCGTGTGTGGGTCCGGGGGAGGCCCAC +
Preference number: 6 (lower is better)
Translates to: GACKRASGSPNG*VFPCVGPGEAH
Trigger: GTGGGCCTCCCCCGGACCCACACACGGAAACACGCAACCATTCGGGGATCCAGACGCCCGTTTACACGCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000510241.5
CDS CCA 72 bp CGTCTGGATCCCCGAATGGTTGCGTGTTTCCGTGTGTaGGTCCGGGGGAGGCCCACGAACGCCAGCGAAACC +
Preference number: 6 (lower is better)
Translates to: RLDPRMVACFRV*VRGRPTNASET
Trigger: GGTTTCGCTGGCGTTCGTGGGCCTCCCCCGGACCCACACACGGAAACACGCAACCATTCGGGGATCCAGACG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000510241.5
CDS GCA 72 bp TCCCTCAGCTCCTGGTCTTCCCACCGGGCCCCTCCGTaGACACCATCGCAGTTGACCAGAATGATGGCCAGC +
Preference number: 6 (lower is better)
Translates to: SLSSWSSHRAPP*TPSQLTRMMAS
Trigger: GCTGGCCATCATTCTGGTCAACTGCGATGGTGTGCACGGAGGGGCCCGGTGGGAAGACCAGGAGCTGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506958.5
ENST00000510241.5
CDS CAA 72 bp CACAGCCTGCAGCCGGGAGGGAGAAGTAGCTCTTGCTaGGGGGATGTAGGCATCCTCACCGGCCCTTGGAGC +
Preference number: 6 (lower is better)
Translates to: HSLQPGGRSSSC*GDVGILTGPWS
Trigger: GCTCCAAGGGCCGGTGAGGATGCCTACATCCCCCAAGCAAGAGCTACTTCTCCCTCCCGGCTGCAGGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000503979.1
ENST00000510241.5
ENST00000511896.5
ENST00000513507.5
ENST00000515056.5
CDS CAA 90 bp CCTCCGTTCCCGTGCCTGGGTCCTCTGCATCTCCTAGTTCCCAGGTaGGGCGCTGCCACTGGGTGCTACCGCTGGGTACATGCCAGTAGT +
Preference number: 6 (lower is better)
Translates to: PPFPCLGPLHLLVPR*GAATGCYRWVHASS
Trigger: ACTACTGGCATGTACCCAGCGGTAGCACCCAGTGGCAGCGCCCAACCTGGGAACTAGGAGATGCAGAGGACCCAGGCACGGGAACGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503850.1
ENST00000505617.5
ENST00000506289.5
ENST00000506958.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000513507.5
CDS CAA 90 bp CTCTACCTACCGTGCCTGGGTCCTCTGCATCTCCTAGTTCCCAGGTaGGGCGCTGCCACTGGGTGCTACCGCTGGGTACATGCCAGTAGT +
Preference number: 6 (lower is better)
Translates to: LYLPCLGPLHLLVPR*GAATGCYRWVHASS
Trigger: ACTACTGGCATGTACCCAGCGGTAGCACCCAGTGGCAGCGCCCAACCTGGGAACTAGGAGATGCAGAGGACCCAGGCACGGTAGGTAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506165.1
ENST00000511459.1
CDS CCA 72 bp GGAGGCTGGCTCCGGCTGCGGGTCTGGGCCAGCTGCTaGATACAGTTATTGACTGCAATACTGCTCTTCCCC +
Preference number: 6 (lower is better)
Translates to: GGWLRLRVWASC*IQLLTAILLFP
Trigger: GGGGAAGAGCAGTATTGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503979.1
ENST00000505617.5
ENST00000506289.5
ENST00000506958.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511463.1
ENST00000511896.5
ENST00000513507.5
ENST00000515056.5
CDS CAA 72 bp CGGCTGCGGGTCTGGGCCAGCTGCTGGATACAGTTATaGACTGCAATACTGCTCTTCCCCGGTGCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: RLRVWASCWIQL*TAILLFPGARS
Trigger: GGACCTGGCACCGGGGAAGAGCAGTATTGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCGCAGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503979.1
ENST00000505617.5
ENST00000506289.5
ENST00000506958.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511463.1
ENST00000511896.5
ENST00000513507.5
ENST00000515056.5
CDS TCA 72 bp AACGCCAGCGAAACCGCTGACACCACCGCCCAACTATaGACTCATCAGGCGCCTGAAGACCGACACGCCGAA +
Preference number: 6 (lower is better)
Translates to: NASETADTTAQL*THQAPEDRHAE
Trigger: TTCGGCGTGTCGGTCTTCAGGCGCCTGATGAGTTCATAGTTGGGCGGTGGTGTCAGCGGTTTCGCTGGCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357560.9
ENST00000358580.9
ENST00000510241.5
CDS TCA 72 bp GGCTGCGGGTCTGGGCCAGCTGCTGGATACAGTTATTaGCTGCAATACTGCTCTTCCCCGGTGCCAGGTCCT +
Preference number: 6 (lower is better)
Translates to: GCGSGPAAGYSY*LQYCSSPVPGP
Trigger: AGGACCTGGCACCGGGGAAGAGCAGTATTGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503979.1
ENST00000505617.5
ENST00000506289.5
ENST00000506958.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511463.1
ENST00000511896.5
ENST00000513507.5
ENST00000515056.5
CDS CCA 72 bp GTTCCCAGGTTGGGCGCTGCCACTGGGTGCTACCGCTaGGTACATGCCAGTAGTAAGTACCTGCAGCATCGT +
Preference number: 6 (lower is better)
Translates to: VPRLGAATGCYR*VHASSKYLQHR
Trigger: ACGATGCTGCAGGTACTTACTACTGGCATGTACCCAGCGGTAGCACCCAGTGGCAGCGCCCAACCTGGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503850.1
ENST00000505617.5
ENST00000506165.1
ENST00000506289.5
ENST00000506958.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511459.1
ENST00000511896.5
ENST00000513507.5
CDS CCA 72 bp CAGGCACCATCTGGAGGCTGGCTCCGGCTGCGGGTCTaGGCCAGCTGCTGGATACAGTTATTGACTGCAATA +
Preference number: 6 (lower is better)
Translates to: QAPSGGWLRLRV*ASCWIQLLTAI
Trigger: TATTGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTCCAGATGGTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503979.1
ENST00000505617.5
ENST00000506289.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511463.1
ENST00000511896.5
ENST00000513507.5
ENST00000515056.5
CDS CAA 72 bp CCTGGTCCCTACACAGAGAGGTATCCCCCACCGTCTTaGAGCCCCAGAGTAGCCTTTCGGATTCCCTCGTCC +
Preference number: 6 (lower is better)
Translates to: PGPYTERYPPPS*SPRVAFRIPSS
Trigger: GGACGAGGGAATCCGAAAGGCTACTCTGGGGCTCAAAGACGGTGGGGGATACCTCTCTGTGTAGGGACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506958.5
ENST00000510241.5
CDS TCA 72 bp TCATTTTGCCTGGGCCACCCGTTACCTCCGGTCCAGTaGACTCTCCAGGCTGGAGAAGGATCTCCCTTTGGG +
Preference number: 6 (lower is better)
Translates to: SFCLGHPLPPVQ*TLQAGEGSPFG
Trigger: CCCAAAGGGAGATCCTTCTCCAGCCTGGAGAGTTCACTGGACCGGAGGTAACGGGTGGCCCAGGCAAAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503850.1
ENST00000506165.1
ENST00000511459.1
CDS GCA 72 bp GGTGCTACCGCTGGGTACATGCCAGTAGTAAGTACCTaGAGCATCGTGGATCTTCCTCCAGCCAGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: GATAGYMPVVST*SIVDLPPARRQ
Trigger: CTGCCTCCTGGCTGGAGGAAGATCCACGATGCTGCAGGTACTTACTACTGGCATGTACCCAGCGGTAGCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503850.1
ENST00000505617.5
ENST00000506165.1
ENST00000506289.5
ENST00000506958.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511459.1
ENST00000511896.5
ENST00000513507.5
CDS GCA 72 bp CATCTCCTAGTTCCCAGGTTGGGCGCTGCCACTGGGTaGTACCGCTGGGTACATGCCAGTAGTAAGTACCTG +
Preference number: 6 (lower is better)
Translates to: HLLVPRLGAATG*YRWVHASSKYL
Trigger: CAGGTACTTACTACTGGCATGTACCCAGCGGTAGCACCCAGTGGCAGCGCCCAACCTGGGAACTAGGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503850.1
ENST00000505617.5
ENST00000506165.1
ENST00000506289.5
ENST00000506958.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511459.1
ENST00000511896.5
ENST00000513507.5
CDS GCA 72 bp TCTGGAGGCTGGCTCCGGCTGCGGGTCTGGGCCAGCTaGTGGATACAGTTATTGACTGCAATACTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: SGGWLRLRVWAS*WIQLLTAILLF
Trigger: GAAGAGCAGTATTGCAGTCAATAACTGTATCCAGCAGCTGGCCCAGACCCGCAGCCGGAGCCAGCCTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503979.1
ENST00000505617.5
ENST00000506289.5
ENST00000506958.5
ENST00000509914.5
ENST00000510241.5
ENST00000511201.2
ENST00000511463.1
ENST00000511896.5
ENST00000513507.5
ENST00000515056.5
CDS CCA 72 bp CGGATGTGCACCAGAGGCTGGCAGTGGATCAGACTGTaGTCCAGGGGATTCACTAGGCTCATGGCATCCTTC +
Preference number: 6 (lower is better)
Translates to: RMCTRGWQWIRL*SRGFTRLMASF
Trigger: GAAGGATGCCATGAGCCTAGTGAATCCCCTGGACCACAGTCTGATCCACTGCCAGCCTCTGGTGCACATCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000354402.9
ENST00000356738.6
ENST00000357560.9
ENST00000358580.9
ENST00000412920.7
ENST00000467078.5
ENST00000503979.1
ENST00000506289.5
ENST00000510241.5
ENST00000511201.2
ENST00000511463.1
ENST00000511896.5
ENST00000513507.5
ENST00000515056.5
CDS CCA 72 bp GGGATCACAGCCAGAGGCTGGCAGTGGATCAGACTGTaGTCCAGGGGATTCACTAGGCTCATGGCATCCTTC +
Preference number: 6 (lower is better)
Translates to: GITARGWQWIRL*SRGFTRLMASF
Trigger: GAAGGATGCCATGAGCCTAGTGAATCCCCTGGACCACAGTCTGATCCACTGCCAGCCTCTGGCTGTGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509914.5
CDS CCA 72 bp GTGTCCAGGGGTTCAAGTACTGGGGATCAGCATCAGTaGGGATCACAGCCAGAGGCTGGCAGTGGATCAGAC +
Preference number: 6 (lower is better)
Translates to: VSRGSSTGDQHQ*GSQPEAGSGSD
Trigger: GTCTGATCCACTGCCAGCCTCTGGCTGTGATCCCCACTGATGCTGATCCCCAGTACTTGAACCCCTGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509914.5
CDS CCA 72 bp CCAATGCCCTCAGGCCCAAGTCACTACCTTAGCCCCTaGCTCCATGCTCTGGATGTAGGATTCCCCACCATA +
Preference number: 6 (lower is better)
Translates to: PMPSGPSHYLSP*LHALDVGFPTI
Trigger: TATGGTGGGGAATCCTACATCCAGAGCATGGAGCCAGGGGCTAAGGTAGTGACTTGGGCCTGAGGGCATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503979.1
CDS GCA 72 bp CACATGGCACTTGAGCATACAGCTATCTTTGTCACTTaGCACAAAAGCGAAGTCCCGGCCCTTGGAGCTCCC +
Preference number: 6 (lower is better)
Translates to: HMALEHTAIFVT*HKSEVPALGAP
Trigger: GGGAGCTCCAAGGGCCGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCTCAAGTGCCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412920.7
ENST00000506289.5
ENST00000511201.2
CDS GCA 72 bp CAGAACCTGGGCTGGAAAGCAGACCATGGGTCCAGCTaGATTTTTGAACACCATGGAACCCCAAGCCTTTCA +
Preference number: 6 (lower is better)
Translates to: QNLGWKADHGSS*IFEHHGTPSLS
Trigger: TGAAAGGCTTGGGGTTCCATGGTGTTCAAAAATGCAGCTGGACCCATGGTCTGCTTTCCAGCCCAGGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503850.1
ENST00000511459.1
CDS CAA 72 bp GGCAGGTGCCACAATACATACTCCCTGTCTTCACCCTaGATCACCTCTGTTCAGTCCAATCCCACCCTTGTC +
Preference number: 6 (lower is better)
Translates to: GRCHNTYSLSSP*ITSVQSNPTLV
Trigger: GACAAGGGTGGGATTGGACTGAACAGAGGTGATCAAGGGTGAAGACAGGGAGTATGTATTGTGGCACCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503979.1
CDS TCA 72 bp GCAGGTGCCACAATACATACTCCCTGTCTTCACCCTTaGTCACCTCTGTTCAGTCCAATCCCACCCTTGTCT +
Preference number: 6 (lower is better)
Translates to: AGATIHTPCLHP*SPLFSPIPPLS
Trigger: AGACAAGGGTGGGATTGGACTGAACAGAGGTGATCAAGGGTGAAGACAGGGAGTATGTATTGTGGCACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503979.1
CDS GCA 72 bp CACATGGCACTTGAGCATACAGCTATCTTTGTCACTTaGCACAAAAGCGAAGTCCCTGTCACGGCCCTTGGA +
Preference number: 6 (lower is better)
Translates to: HMALEHTAIFVT*HKSEVPVTALG
Trigger: TCCAAGGGCCGTGACAGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCTCAAGTGCCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357560.9
ENST00000358580.9
CDS CCA 72 bp GGGGAAGGGACAGGAATTAATAAGGATGGAGTAGGGTaGCAGGTGCCACAATACATACTCCCTGTCTTCACC +
Preference number: 6 (lower is better)
Translates to: GEGTGINKDGVG*QVPQYILPVFT
Trigger: GGTGAAGACAGGGAGTATGTATTGTGGCACCTGCCACCCTACTCCATCCTTATTAATTCCTGTCCCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503979.1
CDS CAA 72 bp CAGCAAAACACATGGCACTTGAGCATACAGCTATCTTaGTCACTTGCCACAAAAGCGAAGTCCCGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: QQNTWHLSIQLS*SLATKAKSRPL
Trigger: CAAGGGCCGGGACTTCGCTTTTGTGGCAAGTGACAAAGATAGCTGTATGCTCAAGTGCCATGTGTTTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412920.7
ENST00000506289.5
ENST00000511201.2
CDS CCA 72 bp GAACCCAAAACATGTGACAGAATCCAGAACCTGGGCTaGAAAGCAGACCATGGGTCCAGCTGCATTTTTGAA +
Preference number: 6 (lower is better)
Translates to: EPKTCDRIQNLG*KADHGSSCIFE
Trigger: TTCAAAAATGCAGCTGGACCCATGGTCTGCTTTCCAGCCCAGGTTCTGGATTCTGTCACATGTTTTGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000503850.1
ENST00000511459.1
CDS TCA 72 bp TGTAGGATTCCCCACCATACCAGGACAGAGAGTTACTaGAACAGAGCAGAGCTGTTAAGAGGACCACATTTC +
Preference number: 6 (lower is better)
Translates to: CRIPHHTRTESY*NRAELLRGPHF
Trigger: GAAATGTGGTCCTCTTAACAGCTCTGCTCTGTTTCAGTAACTCTCTGTCCTGGTATGGTGGGGAATCCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503979.1
ENST00000515056.5