Pregenerated sensors for AOC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000131480

Ensembl transcript IDs: ENST00000253799.8, ENST00000452774.2

Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	AGTCCGGGACACAGGCTGCCAGGTCGGGGAGGCAGGCCACAGGATTaGTGCTGCAGAGCCCAGCATCCTGGCCCTTCTCAAAGTAGACAC	+
Preference number: 5 (lower is better) Translates to: SPGHRLPGRGGRPQD*CCRAQHPGPSQSRH Trigger: GTGTCTACTTTGAGAAGGGCCAGGATGCTGGGCTCTGCAGCATCAATCCTGTGGCCTGCCTCCCCGACCTGGCAGCCTGTGTCCCGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS GCA 90 bp	TCCTTTCCCAGGACCTGCCGAGTCAGCTGTGGGCGCTGTAGCCAGTaGTCCGGGTTCCAGGGGGCAGCCACAGGTTTAAACACCACGTCT	+
Preference number: 5 (lower is better) Translates to: SFPRTCRVSCGRCSQ*SGFQGAATGLNTTS Trigger: AGACGTGGTGTTTAAACCTGTGGCTGCCCCCTGGAACCCGGAGCACTGGCTACAGCGCCCACAGCTGACTCGGCAGGTCCTGGGAAAGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS GCA 90 bp	GGGCTTCCCAAGGAAAAAGCTGTCAGGTCCTCCTTTCCCAGGACCTaGCGAGTCAGCTGTGGGCGCTGTAGCCAGTGCTCCGGGTTCCAG	+
Preference number: 5 (lower is better) Translates to: GLPKEKAVRSSFPRT*RVSCGRCSQCSGFQ Trigger: CTGGAACCCGGAGCACTGGCTACAGCGCCCACAGCTGACTCGGCAGGTCCTGGGAAAGGAGGACCTGACAGCTTTTTCCTTGGGAAGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS GCA 90 bp	CCACTCCCCGCACCAAGCCTCGGCTGTTACGGCCGAGTCCAAAGCTaGTATCCAAATAGCGAGTCAGCATCGTCTTGGGTGAATCGGCAC	+
Preference number: 5 (lower is better) Translates to: PLPAPSLGCYGRVQS*YPNSESASSWVNRH Trigger: GTGCCGATTCACCCAAGACGATGCTGACTCGCTATTTGGATAGCAGCTTTGGACTCGGCCGTAACAGCCGAGGCTTGGTGCGGGGAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS GCA 90 bp	GACGACAGGAAGATGGGTGCCTTGGGTAGCTCCACCTCTTTCAGATaGCTCCACATCTGTGTAAACTCAGCTCTCAGCACCGGGCGACGG	+
Preference number: 5 (lower is better) Translates to: DDRKMGALGSSTSFR*LHICVNSALSTGRR Trigger: CCGTCGCCCGGTGCTGAGAGCTGAGTTTACACAGATGTGGAGGCATCTGAAAGAGGTGGAGCTACCCAAGGCACCCATCTTCCTGTCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS TCA 90 bp	TCCCAAAGAGGAGGCCCTCCTCTCCCCCTTTCAGGAAAGCTGTGTTaGTATAACCCGTGGCATGGACCCGCCCTTCAAGTGCCCCATTTG	+
Preference number: 5 (lower is better) Translates to: SQRGGPPLPLSGKLC*YNPWHGPALQVPHL Trigger: CAAATGGGGCACTTGAAGGGCGGGTCCATGCCACGGGTTATATCAACACAGCTTTCCTGAAAGGGGGAGAGGAGGGCCTCCTCTTTGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS GCA 90 bp	TTCCAACCGGCCAGACTTAAACTCCCGTTCCAACTGGCCCAAGTCTaGATAGTAGTGCCCAAGGTAGAAGACCTGCTGGACAGTCCAGTG	+
Preference number: 5 (lower is better) Translates to: FQPARLKLPFQLAQV*IVVPKVEDLLDSPV Trigger: CACTGGACTGTCCAGCAGGTCTTCTACCTTGGGCACTACTATGCAGACTTGGGCCAGTTGGAACGGGAGTTTAAGTCTGGCCGGTTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS CCA 90 bp	CCCTGGAACCGAACATCAAAAATCCTCAGGCCGCTGAACACCCCATaGCCAAAGGTAAATGACCAGAGGGAGGATACCACCAGGTTTCCT	+
Preference number: 5 (lower is better) Translates to: PWNRTSKILRPLNTP*PKVNDQREDTTRFP Trigger: AGGAAACCTGGTGGTATCCTCCCTCTGGTCATTTACCTTTGGCCATGGGGTGTTCAGCGGCCTGAGGATTTTTGATGTTCGGTTCCAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS TCA 90 bp	ATCAAAAATCCTCAGGCCGCTGAACACCCCATGGCCAAAGGTAAATaGCCAGAGGGAGGATACCACCAGGTTTCCTTGCACACTGTACTG	+
Preference number: 5 (lower is better) Translates to: IKNPQAAEHPMAKGK*PEGGYHQVSLHTVL Trigger: CAGTACAGTGTGCAAGGAAACCTGGTGGTATCCTCCCTCTGGTCATTTACCTTTGGCCATGGGGTGTTCAGCGGCCTGAGGATTTTTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS GCA 90 bp	ATAAAAACACGGAGAATAGAAAGTAGAAACAGGGAAAAGTACATGTaGCTAACCACGCCGCCCGCCACACCCTCAGGACTAGAAGCCGTG	+
Preference number: 5 (lower is better) Translates to: IKTRRIESRNREKYM*LTTPPATPSGLEAV Trigger: CACGGCTTCTAGTCCTGAGGGTGTGGCGGGCGGCGTGGTTAGGCACATGTACTTTTCCCTGTTTCTACTTTCTATTCTCCGTGTTTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS TCA 90 bp	GAGTCCAAAGCTGCTATCCAAATAGCGAGTCAGCATCGTCTTGGGTaGATCGGCACCATAGATAGATACACACTCCTGGACACTGACTTC	+
Preference number: 5 (lower is better) Translates to: ESKAAIQIASQHRLG*IGTIDRYTLLDTDF Trigger: GAAGTCAGTGTCCAGGAGTGTGTATCTATCTATGGTGCCGATTCACCCAAGACGATGCTGACTCGCTATTTGGATAGCAGCTTTGGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS GCA 72 bp	AGGACCTGCCGAGTCAGCTGTGGGCGCTGTAGCCAGTaGTCCGGGTTCCAGGGGGCAGCCACAGGTTTAAAC	+
Preference number: 6 (lower is better) Translates to: RTCRVSCGRCSQ*SGFQGAATGLN Trigger: GTTTAAACCTGTGGCTGCCCCCTGGAACCCGGAGCACTGGCTACAGCGCCCACAGCTGACTCGGCAGGTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS CAA 72 bp	ACACAGGCTGCCAGGTCGGGGAGGCAGGCCACAGGATaGATGCTGCAGAGCCCAGCATCCTGGCCCTTCTCA	+
Preference number: 6 (lower is better) Translates to: TQAARSGRQATG*MLQSPASWPFS Trigger: TGAGAAGGGCCAGGATGCTGGGCTCTGCAGCATCAATCCTGTGGCCTGCCTCCCCGACCTGGCAGCCTGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS GCA 72 bp	AAGGAAAAAGCTGTCAGGTCCTCCTTTCCCAGGACCTaGCGAGTCAGCTGTGGGCGCTGTAGCCAGTGCTCC	+
Preference number: 6 (lower is better) Translates to: KEKAVRSSFPRT*RVSCGRCSQCS Trigger: GGAGCACTGGCTACAGCGCCCACAGCTGACTCGGCAGGTCCTGGGAAAGGAGGACCTGACAGCTTTTTCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS TCA 72 bp	GGAGGCCCTCCTCTCCCCCTTTCAGGAAAGCTGTGTTaGTATAACCCGTGGCATGGACCCGCCCTTCAAGTG	+
Preference number: 6 (lower is better) Translates to: GGPPLPLSGKLC*YNPWHGPALQV Trigger: CACTTGAAGGGCGGGTCCATGCCACGGGTTATATCAACACAGCTTTCCTGAAAGGGGGAGAGGAGGGCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS TCA 72 bp	CCTCAGGCCGCTGAACACCCCATGGCCAAAGGTAAATaGCCAGAGGGAGGATACCACCAGGTTTCCTTGCAC	+
Preference number: 6 (lower is better) Translates to: PQAAEHPMAKGK*PEGGYHQVSLH Trigger: GTGCAAGGAAACCTGGTGGTATCCTCCCTCTGGTCATTTACCTTTGGCCATGGGGTGTTCAGCGGCCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS GCA 72 bp	GCACCAAGCCTCGGCTGTTACGGCCGAGTCCAAAGCTaGTATCCAAATAGCGAGTCAGCATCGTCTTGGGTG	+
Preference number: 6 (lower is better) Translates to: APSLGCYGRVQS*YPNSESASSWV Trigger: CACCCAAGACGATGCTGACTCGCTATTTGGATAGCAGCTTTGGACTCGGCCGTAACAGCCGAGGCTTGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS GCA 72 bp	AGAGCCCAGCATCCTGGCCCTTCTCAAAGTAGACACTaGCAGGGGAGAAGATGGAGGGGTCCTCATCAAAGA	+
Preference number: 6 (lower is better) Translates to: RAQHPGPSQSRH*QGRRWRGPHQR Trigger: TCTTTGATGAGGACCCCTCCATCTTCTCCCCTGGCAGTGTCTACTTTGAGAAGGGCCAGGATGCTGGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS GCA 72 bp	GCCAGACTTAAACTCCCGTTCCAACTGGCCCAAGTCTaGATAGTAGTGCCCAAGGTAGAAGACCTGCTGGAC	+
Preference number: 6 (lower is better) Translates to: ARLKLPFQLAQV*IVVPKVEDLLD Trigger: GTCCAGCAGGTCTTCTACCTTGGGCACTACTATGCAGACTTGGGCCAGTTGGAACGGGAGTTTAAGTCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS GCA 72 bp	AAGATGGGTGCCTTGGGTAGCTCCACCTCTTTCAGATaGCTCCACATCTGTGTAAACTCAGCTCTCAGCACC	+
Preference number: 6 (lower is better) Translates to: KMGALGSSTSFR*LHICVNSALST Trigger: GGTGCTGAGAGCTGAGTTTACACAGATGTGGAGGCATCTGAAAGAGGTGGAGCTACCCAAGGCACCCATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS TCA 72 bp	GCTGCTATCCAAATAGCGAGTCAGCATCGTCTTGGGTaGATCGGCACCATAGATAGATACACACTCCTGGAC	+
Preference number: 6 (lower is better) Translates to: AAIQIASQHRLG*IGTIDRYTLLD Trigger: GTCCAGGAGTGTGTATCTATCTATGGTGCCGATTCACCCAAGACGATGCTGACTCGCTATTTGGATAGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2
CDS TCA 72 bp	AAATGTAGTCATAGTTGCCCACAGATGACACAGACCTaGCCACAAGGGCTGAGCTGGCCAAACCACCATAGA	+
Preference number: 6 (lower is better) Translates to: KCSHSCPQMTQT*PQGLSWPNHHR Trigger: TCTATGGTGGTTTGGCCAGCTCAGCCCTTGTGGTCAGGTCTGTGTCATCTGTGGGCAACTATGACTACATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000253799.8 ENST00000452774.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu