Pregenerated sensors for ANKRD45 (Homo sapiens)
Ensembl gene IDs: ENSG00000183831Ensembl transcript IDs: ENST00000333279.3, ENST00000367712.2
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAAGTGCTTTCCTGAAGGAGCACGTGAAACTCACATGGGGCTGTaGTTGGAGGAGCAGAGGCGAGGCCAGAGTCCGGACATAAGCATG | + |
|
Preference number: 1 (lower is better) Translates to: PKCFPEGARETHMGL*LEEQRRGQSPDISM Trigger: CATGCTTATGTCCGGACTCTGGCCTCGCCTCTGCTCCTCCAAGCACAGCCCCATGTGAGTTTCACGTGCTCCTTCAGGAAAGCACTTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGACTCACATGGGGCTGTaGTTGGAGGAGCAGAGGCGA | + |
|
Preference number: 2 (lower is better) Translates to: QPGQERQTLSRRLRGWRETHMGL*LEEQRR Trigger: TCGCCTCTGCTCCTCCAAGCACAGCCCCATGTGAGT...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGTCCATAAACACCCACTaGGTCGGCCAAAAAGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: QPGQERQTLSRRLRGWRESINTH*VGQKGG Trigger: GCCACCTTTTTGGCCGACCCAGTGGGTGTTTATGGA...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| 3UTR CAA 90 bp | AAGTGCTTTCCTGAAGGAGCACGTGAAACTCACATGGGGCTGTGCTaGGAGGAGCAGAGGCGAGGCCAGAGTCCGGACATAAGCATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: KCFPEGARETHMGLC*EEQRRGQSPDISML Trigger: CAGCATGCTTATGTCCGGACTCTGGCCTCGCCTCTGCTCCTCCAAGCACAGCCCCATGTGAGTTTCACGTGCTCCTTCAGGAAAGCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| 3UTR-3UTR TCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGGGCCAAAAAGGTGGCTaGAAGTTATTGCAGTGTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GQERQTLSRRLRGWREREGQKGG*KLLQCS Trigger: AGAACACTGCAATAACTTTCAGCCACCTTTTTGGCC...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGACCCCACCTCACAGGTaGAATTTAATTTTGGACATA | + |
|
Preference number: 2 (lower is better) Translates to: QPGQERQTLSRRLRGWRETPPHR*NLILDI Trigger: TATGTCCAAAATTAAATTTCACCTGTGAGGTGGGGT...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGTCCAAACCACCAATATaGAACCAACTATCGTACTTA | + |
|
Preference number: 2 (lower is better) Translates to: QPGQERQTLSRRLRGWRESKPPI*NQLSYL Trigger: TAAGTACGATAGTTGGTTTCATATTGGTGGTTTGGA...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGCTGACAAAGTATTACTaGATTACCCATTCCTTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: QPGQERQTLSRRLRGWRELTKYY*ITHSFS Trigger: GGAAAAGGAATGGGTAATTCAGTAATACTTTGTCAG...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGGTCTTAATATTTCCTTaGTCCAAGTGTCATTCCATA | + |
|
Preference number: 2 (lower is better) Translates to: GQERQTLSRRLRGWREREVLIFP*SKCHSI Trigger: TATGGAATGACACTTGGAGCAAGGAAATATTAAGAC...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| 3UTR-3UTR CCA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTGAATGGGAGGGGAAATaGTCTTCAGTCCAGTTACAA | + |
|
Preference number: 2 (lower is better) Translates to: KVAGVEREREIREEEEGVEWEGK*SSVQLQ Trigger: TTGTAACTGGACTGAAGACCATTTCCCCTCCCATTC...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| 3UTR CAA 90 bp | AGAATGGGAGGGGAAATGGTCTTCAGTCCAGTTACAATATCTGTATaGCCAGCCTTACAGAATAGGAGAACTCTTCTAAGTATAAAACTA | + |
|
Preference number: 2 (lower is better) Translates to: RMGGEMVFSPVTISV*PALQNRRTLLSIKL Trigger: TAGTTTTATACTTAGAAGAGTTCTCCTATTCTGTAAGGCTGGCAATACAGATATTGTAACTGGACTGAAGACCATTTCCCCTCCCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| 3UTR TCA 72 bp | GGAGGATCACTTGAGTGCAGGAGTTACAGGTTACAGTaGGCTATGATCATGATAACTCCACTGCATTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GGSLECRSYRLQ*AMIMITPLHSS Trigger: GCTGGAATGCAGTGGAGTTATCATGATCATAGCTCACTGTAACCTGTAACTCCTGCACTCAAGTGATCCTCC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTGGTCTTAATATTTCCTaGCTCCAAGTGTCATTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: KVAGVEREREIREEEEGVGLNIS*LQVSFH Trigger: ATGGAATGACACTTGGAGCAAGGAAATATTAAGACC...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGCCTCCCGGGCTCAGGTaGTTCTCCTGCCTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPGQERQTLSRRLRGWREPPGLR*FSCLSL Trigger: GAGGCTGAGGCAGGAGAATCACCTGAGCCCGGGAGG...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGCACTGCATTCCAGCCTaGGCAGGAGAGGCAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWREREHCIPA*AGEADP Trigger: AGGGTCTGCCTCTCCTGCCCAGGCTGGAATGCAGTG...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGGGTGGGAGGATCACTTaGGTGCAGGAGTTACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QPGQERQTLSRRLRGWREGGRIT*VQELQV Trigger: AACCTGTAACTCCTGCACTCAAGTGATCCTCCCACC...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGCACGTGAAACTCACATaGGGCTGTGCTTGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWREREHVKLT*GCAWRS Trigger: GCTCCTCCAAGCACAGCCCCATGTGAGTTTCACGTG...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGTCCATAAACACCCACTaGGTCGGCCAAAAAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWRERESINTH*VGQKGG Trigger: GCCACCTTTTTGGCCGACCCAGTGGGTGTTTATGGA...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR TCA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGTTGCACGGCATGCACTaGGGATGGTATTCTTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QPGQERQTLSRRLRGWRELHGMH*GWYSCL Trigger: AAGACAAGAATACCATCCTCAGTGCATGCCGTGCAA...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGCCCAGCCATGCAAGCTaGATACAACAAATTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWREREPSHAS*IQQISP Trigger: GGGAGAAATTTGTTGTATGCAGCTTGCATGGCTGGG...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGCTAAGAGAAGCTGCATaGCCTGTTCATGATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QPGQERQTLSRRLRGWRELREAA*PVHDED Trigger: ATCCTCATCATGAACAGGCCATGCAGCTTCTCTTAG...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGGGTCGGCCAAAAAGGTaGCTGAAAGTTATTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWREREGRPKR*LKVIAV Trigger: CACTGCAATAACTTTCAGCCACCTTTTTGGCCGACC...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGATTACCCAAGCATGGTaGGAGGATCACTTGAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWREREITQAW*EDHLSA Trigger: TGCACTCAAGTGATCCTCCCACCATGCTTGGGTAAT...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGTTGGAGGTATCATCTTaGCTTCTCTTCTGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWRERELEVSS*LLFWSW Trigger: CCATGACCAGAAGAGAAGTCAAGATGATACCTCCAA...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGCACTTTGCCCAGCCATaGAAGCTGCATACAACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWREREHFAQP*KLHTTN Trigger: ATTTGTTGTATGCAGCTTGCATGGCTGGGCAAAGTG...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGCTTCTCTTCTGGTCATaGCTTGTTACAGATTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWRERELLFWS*LVTDLA Trigger: TGCCAAATCTGTAACAAGCCATGACCAGAAGAGAAG...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR GCA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTTCACCCAGGCTGGAATaGAGTGGTGCGATCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVAGVEREREIREEEEGVSPRLE*SGAISA Trigger: AGCCGAGATCGCACCACTGCATTCCAGCCTGGGTGA...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGGTTTCCTCTGGTTCTTaGGCTTCTTCTTCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWREREVSSGS*ASSSSF Trigger: AAATGAAGAAGAAGAAGCCCAAGAACCAGAGGAAAC...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | TTTATACCCAAGTGCTTTCCTGAAGGAGCACGTGAAACTCACATGGGGCTGTGCCAGGCTGGAATGCAGTaGTGCGATCTCGGCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: FIPKCFPEGARETHMGLCQAGMQ*CDLGSL Trigger: CAGTGAGCCGAGATCGCACCACTGCATTCCAGCCTG...GCACAGCCCCATGTGAGTTTCACGTGCTCCTTCAGGAAAGCACTTGGGTATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGTTGGCACTTTTCACTTaGCATGGTGTAGTCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWRERELALFT*HGVVIF Trigger: AAAAATGACTACACCATGTCAAGTGAAAAGTGCCAA...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGTCCAAACCACCAATATaGAACCAACTATCGTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWRERESKPPI*NQLSYL Trigger: TAAGTACGATAGTTGGTTTCATATTGGTGGTTTGGA...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGCTGACAAAGTATTACTaGATTACCCATTCCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWRERELTKYY*ITHSFS Trigger: GGAAAAGGAATGGGTAATTCAGTAATACTTTGTCAG...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGATTCACACCATATTTTaGCAAAGCTCTAATCACGTC | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWREREIHTIF*QSSNHV Trigger: GACGTGATTAGAGCTTTGGCAAAATATGGTGTGAAT...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGGTCTTAATATTTCCTTaGTCCAAGTGTCATTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: QPGQERQTLSRRLRGWREVLIFP*SKCHSI Trigger: TATGGAATGACACTTGGAGCAAGGAAATATTAAGAC...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGTTACAATATCTGTATTaGCAGCCTTACAGAATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPGQERQTLSRRLRGWRELQYLY*QPYRIG Trigger: TCCTATTCTGTAAGGCTGGCAATACAGATATTGTAA...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGCTTAAAGCCTCCACATaGTCTTCACGAATGATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GQERQTLSRRLRGWRERELKAST*SSRMIY Trigger: ATAAATCATTCGTGAAGACCATGTGGAGGCTTTAAG...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTAGCCTCCCAAGTCACTaGGATTACAGGCACGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KVAGVEREREIREEEEGVSLPSH*DYRHVP Trigger: TGGCACGTGCCTGTAATCCCAGTGACTTGGGAGGCT...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR TCA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTCCTCTACATCCCCTGTaGGAGCAGGTTGTAAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVAGVEREREIREEEEGVPLHPL*EQVVKG Trigger: CCCTTTTACAACCTGCTCTCACAGGGGATGTAGAGG...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR GCA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTCTAATCACGTCACTTTaGCCAGCCATGCAAGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVAGVEREREIREEEEGVLITSL*PAMQAA Trigger: TGCAGCTTGCATGGCTGGGCAAAGTGACGTGATTAG...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTAGGGTTTCACCATGTTaGCCAGGCTTGTCTCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: KVAGVEREREIREEEEGVRVSPC*PGLSQT Trigger: GGTTTGAGACAAGCCTGGCCAACATGGTGAAACCCT...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR GCA 90 bp | TTTATACCCAAGTGCTTTCCTGAAGGAGCACGTGAAACTCACATGGGGCTGTGCGGAGGATCACTTGAGTaGAGGAGTTACAGGTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: FIPKCFPEGARETHMGLCGGSLE*RSYRLQ Trigger: CTGTAACCTGTAACTCCTGCACTCAAGTGATCCTCC...GCACAGCCCCATGTGAGTTTCACGTGCTCCTTCAGGAAAGCACTTGGGTATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR TCA 90 bp | TTTATACCCAAGTGCTTTCCTGAAGGAGCACGTGAAACTCACATGGGGCTGTGCGGCCAAAAAGGTGGCTaGAAGTTATTGCAGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FIPKCFPEGARETHMGLCGQKGG*KLLQCS Trigger: AGAACACTGCAATAACTTTCAGCCACCTTTTTGGCC...GCACAGCCCCATGTGAGTTTCACGTGCTCCTTCAGGAAAGCACTTGGGTATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR GCA 90 bp | TTTATACCCAAGTGCTTTCCTGAAGGAGCACGTGAAACTCACATGGGGCTGTGCAGGTCTTCTTTGTACTaGTCCATAAACACCCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: FIPKCFPEGARETHMGLCRSSLY*SINTHW Trigger: CCAGTGGGTGTTTATGGAGCAGTACAAAGAAGACCT...GCACAGCCCCATGTGAGTTTCACGTGCTCCTTCAGGAAAGCACTTGGGTATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR TCA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTTCAACACACTCAGTCTaGGAATATCTAGCAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KVAGVEREREIREEEEGVSTHSV*EYLAAT Trigger: TGTTGCTGCTAGATATTCTCAGACTGAGTGTGTTGA...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR TCA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTCATGGTCTTCACGAATaGTTTATACCCAAGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KVAGVEREREIREEEEGVHGLHE*FIPKCF Trigger: AAAGCACTTGGGTATAAATCATTCGTGAAGACCATG...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR TCA 90 bp | TTTATACCCAAGTGCTTTCCTGAAGGAGCACGTGAAACTCACATGGGGCTGTGCACCCCACCTCACAGGTaGAATTTAATTTTGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: FIPKCFPEGARETHMGLCTPPHR*NLILDI Trigger: TATGTCCAAAATTAAATTTCACCTGTGAGGTGGGGT...GCACAGCCCCATGTGAGTTTCACGTGCTCCTTCAGGAAAGCACTTGGGTATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTATGGAAGCTTCTGTATaGGTTTCCAACCACTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KVAGVEREREIREEEEGVMEASV*VSNHSF Trigger: AAATGAGTGGTTGGAAACCCATACAGAAGCTTCCAT...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CCA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTGAACGTATGTTCAGTTaGAGGTATCATCTTGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVAGVEREREIREEEEGVERMFS*RYHLDF Trigger: GAAGTCAAGATGATACCTCCAACTGAACATACGTTC...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR GCA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTTCCAGTTGTTGTCTCTaGTCAAAAAGCTCATTAATG | + |
|
Preference number: 4 (lower is better) Translates to: KVAGVEREREIREEEEGVSSCCL*SKSSLM Trigger: CATTAATGAGCTTTTTGAGCAGAGACAACAACTGGA...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGTCTAATCACGTCACTTaGCCCAGCCATGCAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QPGQERQTLSRRLRGWRESNHVT*PSHASC Trigger: GCAGCTTGCATGGCTGGGCAAAGTGACGTGATTAGA...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGTGGTGGGAGGATCACTaGAGTGCAGGAGTTACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QPGQERQTLSRRLRGWREWWEDH*SAGVTG Trigger: ACCTGTAACTCCTGCACTCAAGTGATCCTCCCACCA...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTCACATGGGGCTGTGCTaGGAGGAGCAGAGGCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KVAGVEREREIREEEEGVHMGLC*EEQRRG Trigger: GCCTCGCCTCTGCTCCTCCAAGCACAGCCCCATGTG...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGTGTTTCCTCTGGTTCTaGGGCTTCTTCTTCTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: QPGQERQTLSRRLRGWRECFLWF*GFFFFI Trigger: AATGAAGAAGAAGAAGCCCAAGAACCAGAGGAAACA...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGTCTTCTGGTCATGGCTaGTTACAGATTTGGCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: QPGQERQTLSRRLRGWRESSGHG*LQIWHF Trigger: AAAGTGCCAAATCTGTAACAAGCCATGACCAGAAGA...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGCTGAGGATGGTATTCTaGTCTTCCTTAAGGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GQERQTLSRRLRGWRERELRMVF*SSLRSF Trigger: GAAACTCCTTAAGGAAGACAAGAATACCATCCTCAG...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAATATCTTCCAGTTGTaGTCTCTGCTCAAAAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QPGQERQTLSRRLRGWRENIFQL*SLLKKL Trigger: GAGCTTTTTGAGCAGAGACAACAACTGGAAGATATT...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | CAGCCTGGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGGGTCTTAATATTTCCTaGCTCCAAGTGTCATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QPGQERQTLSRRLRGWREGLNIS*LQVSFH Trigger: ATGGAATGACACTTGGAGCAAGGAAATATTAAGACC...CTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCCAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | GGGCAGGAGAGGCAGACCCTGTCAAGAAGGTTGCGGGGGTGGAGAGAGAGAGAGGTTACAATATCTGTATaGCCAGCCTTACAGAATAGG | + |
|
Preference number: 5 (lower is better) Translates to: GQERQTLSRRLRGWREREVTISV*PALQNR Trigger: CCTATTCTGTAAGGCTGGCAATACAGATATTGTAAC...CTCTCTCTCTCTCCACCCCCGCAACCTTCTTGACAGGGTCTGCCTCTCCTGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTCCATGTTGGCCAGGCTaGTCTCAAACCGCTGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: KVAGVEREREIREEEEGVPCWPG*SQTADL Trigger: GAGGTCAGCGGTTTGAGACAAGCCTGGCCAACATGG...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | TTTATACCCAAGTGCTTTCCTGAAGGAGCACGTGAAACTCACATGGGGCTGTGCTTTTCAGAGTCAGCCTaGCATCTGCCCAGTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FIPKCFPEGARETHMGLCFSESA*HLPSPG Trigger: TCCTGGACTGGGCAGATGCAAGGCTGACTCTGAAAA...GCACAGCCCCATGTGAGTTTCACGTGCTCCTTCAGGAAAGCACTTGGGTATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | TTTATACCCAAGTGCTTTCCTGAAGGAGCACGTGAAACTCACATGGGGCTGTGCCAGGGTTTCACCATGTaGGCCAGGCTTGTCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FIPKCFPEGARETHMGLCQGFTM*ARLVSN Trigger: GTTTGAGACAAGCCTGGCCAACATGGTGAAACCCTG...GCACAGCCCCATGTGAGTTTCACGTGCTCCTTCAGGAAAGCACTTGGGTATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | TTTATACCCAAGTGCTTTCCTGAAGGAGCACGTGAAACTCACATGGGGCTGTGCGTTGGAGGTATCATCTaGACTTCTCTTCTGGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: FIPKCFPEGARETHMGLCVGGII*TSLLVM Trigger: CATGACCAGAAGAGAAGTCAAGATGATACCTCCAAC...GCACAGCCCCATGTGAGTTTCACGTGCTCCTTCAGGAAAGCACTTGGGTATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS-3UTR CAA 90 bp | AAGGTTGCGGGGGTGGAGAGAGAGAGAGAGATAAGAGAGGAAGAAGAAGGAGTTCACAATATCTTCCAGTaGTTGTCTCTGCTCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KVAGVEREREIREEEEGVHNIFQ*LSLLKK Trigger: CTTTTTGAGCAGAGACAACAACTGGAAGATATTGTG...AACTCCTTCTTCTTCCTCTCTTATCTCTCTCTCTCTCTCCACCCCCGCAACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS GCA 90 bp | TTCAGATTCACACCATATTTTGCCAAAGCTCTAATCACGTCACTTTaGCCAGCCATGCAAGCTGCATACAACAAATTTCTCCCAACGATG | + |
|
Preference number: 5 (lower is better) Translates to: FRFTPYFAKALITSL*PAMQAAYNKFLPTM Trigger: CATCGTTGGGAGAAATTTGTTGTATGCAGCTTGCATGGCTGGGCAAAGTGACGTGATTAGAGCTTTGGCAAAATATGGTGTGAATCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333279.3 ENST00000367712.2 |
||
| CDS GCA 90 bp | ATTTTTGTGAAGATAGGAGTCACAATATCTTCCAGTTGTTGTCTCTaGTCAAAAAGCTCATTAATGGAAGCTTCTGTATGGGTTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: IFVKIGVTISSSCCL*SKSSLMEASVWVSN Trigger: GTTGGAAACCCATACAGAAGCTTCCATTAATGAGCTTTTTGAGCAGAGACAACAACTGGAAGATATTGTGACTCCTATCTTCACAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS GCA 72 bp | AGCTCTAATCACGTCACTTTGCCCAGCCATGCAAGCTaGATACAACAAATTTCTCCCAACGATGTCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSNHVTLPSHAS*IQQISPNDVFF Trigger: GAAGAAGACATCGTTGGGAGAAATTTGTTGTATGCAGCTTGCATGGCTGGGCAAAGTGACGTGATTAGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333279.3 ENST00000367712.2 |
||
| CDS GCA 72 bp | GTTCAAAGCTTCTATATCAACATCCAGTTCTACCAGTaGTTTCAAAGTTTCCAAACGACCCCAGGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VQSFYINIQFYQ*FQSFQTTPGCS Trigger: GCTGCAGCCTGGGGTCGTTTGGAAACTTTGAAAGCACTGGTAGAACTGGATGTTGATATAGAAGCTTTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS CCA 72 bp | TTCTCCCAACGATGTCTTCTTCTAAGAGAAGCTGCATaGCCTGTTCATGATGAGGATTCTCAGGATCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: FSQRCLLLREAA*PVHDEDSQDPQ Trigger: TTGAGGATCCTGAGAATCCTCATCATGAACAGGCCATGCAGCTTCTCTTAGAAGAAGACATCGTTGGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000333279.3 ENST00000367712.2 |
||
| CDS GCA 72 bp | ACACCATATTTTGCCAAAGCTCTAATCACGTCACTTTaGCCAGCCATGCAAGCTGCATACAACAAATTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TPYFAKALITSL*PAMQAAYNKFL Trigger: GAGAAATTTGTTGTATGCAGCTTGCATGGCTGGGCAAAGTGACGTGATTAGAGCTTTGGCAAAATATGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333279.3 ENST00000367712.2 |
||
| CDS CAA 90 bp | ATTCAGATTCACACCATATTTTGCCAAAGCTCTAATCACGTCACTTaGCCCAGCCATGCAAGCTGCATACAACAAATTTCTCCCAACGAT | + |
|
Preference number: 6 (lower is better) Translates to: IQIHTIFCQSSNHVT*PSHASCIQQISPND Trigger: ATCGTTGGGAGAAATTTGTTGTATGCAGCTTGCATGGCTGGGCAAAGTGACGTGATTAGAGCTTTGGCAAAATATGGTGTGAATCTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000333279.3 ENST00000367712.2 |
||
| CDS TCA 72 bp | TTTTACAGAACGTATGTTCAGTTGGAGGTATCATCTTaGCTTCTCTTCTGGTCATGGCTTGTTACAGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: FYRTYVQLEVSS*LLFWSWLVTDL Trigger: CAAATCTGTAACAAGCCATGACCAGAAGAGAAGTCAAGATGATACCTCCAACTGAACATACGTTCTGTAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS GCA 72 bp | AAGATAGGAGTCACAATATCTTCCAGTTGTTGTCTCTaGTCAAAAAGCTCATTAATGGAAGCTTCTGTATGG | + |
|
Preference number: 6 (lower is better) Translates to: KIGVTISSSCCL*SKSSLMEASVW Trigger: CCATACAGAAGCTTCCATTAATGAGCTTTTTGAGCAGAGACAACAACTGGAAGATATTGTGACTCCTATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS CAA 72 bp | CTTTTACAGAACGTATGTTCAGTTGGAGGTATCATCTaGACTTCTCTTCTGGTCATGGCTTGTTACAGATTT | + |
|
Preference number: 6 (lower is better) Translates to: LLQNVCSVGGII*TSLLVMACYRF Trigger: AAATCTGTAACAAGCCATGACCAGAAGAGAAGTCAAGATGATACCTCCAACTGAACATACGTTCTGTAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS CAA 90 bp | TGGTGTAGTCATTTTTGTGAAGATAGGAGTCACAATATCTTCCAGTaGTTGTCTCTGCTCAAAAAGCTCATTAATGGAAGCTTCTGTATG | + |
|
Preference number: 6 (lower is better) Translates to: WCSHFCEDRSHNIFQ*LSLLKKLINGSFCM Trigger: CATACAGAAGCTTCCATTAATGAGCTTTTTGAGCAGAGACAACAACTGGAAGATATTGTGACTCCTATCTTCACAAAAATGACTACACCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||
| CDS CAA 72 bp | CATTTTTGTGAAGATAGGAGTCACAATATCTTCCAGTaGTTGTCTCTGCTCAAAAAGCTCATTAATGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HFCEDRSHNIFQ*LSLLKKLINGS Trigger: GCTTCCATTAATGAGCTTTTTGAGCAGAGACAACAACTGGAAGATATTGTGACTCCTATCTTCACAAAAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000333279.3 |
||