RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD18B (Homo sapiens)

Ensembl gene IDs: ENSG00000230453

Ensembl transcript IDs: ENST00000290943.10, ENST00000357927.7

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATGGGCTTTCTGGTGGAGGGGATACATAGGTTGATGACTGAAGGATaGGGAAAATCTTGCCAGAAAGAGGGAAGAGGCGAAGGCAAAGAT +
Preference number: 1 (lower is better)
Translates to: MGFLVEGIHRLMTEG*GKSCQKEGRGEGKD
Trigger: ATCTTTGCCTTCGCCTCTTCCCTCTTTCTGGCAAGATTTTCCTCATCCTTCAGTCATCAACCTATGTATCCCCTCCACCAGAAAGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357927.7
3UTR-3UTR TCA 90 bp AGATATCATGACAGGTATACAGCGGGGCACTACTGGAACACACAGAAGGGACATTTGATGACTGAAGGATaGGGAAAATCTTGCCAGAAA +
Preference number: 2 (lower is better)
Translates to: RYHDRYTAGHYWNTQKGHLMTEG*GKSCQK
Trigger: TTTCTGGCAAGATTTTCCTCATCCTTCAGTCATCAA...ATGTCCCTTCTGTGTGTTCCAGTAGTGCCCCGCTGTATACCTGTCATGATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357927.7
3UTR-3UTR TCA 90 bp CCAGCACTGGAATTACAAGATGAAGATGGCATGGTCCACCTCCCAATAGTCATAAACACAAGTCATCCATaGAATGCTAAATCTAGTGGG +
Preference number: 2 (lower is better)
Translates to: PALELQDEDGMVHLPIVINTSHP*NAKSSG
Trigger: CCCACTAGATTTAGCATTTCATGGATGACTTGTGTT...TATGACTATTGGGAGGTGGACCATGCCATCTTCATCTTGTAATTCCAGTGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357927.7
3UTR-3UTR CCA 90 bp CCAGCACTGGAATTACAAGATGAAGATGGCATGGTCCACCTCCCAATAGTCATAATCATAACACTAGTATaGACAAACCTGGCAGATACT +
Preference number: 2 (lower is better)
Translates to: PALELQDEDGMVHLPIVIIITLV*TNLADT
Trigger: AGTATCTGCCAGGTTTGTCCATACTAGTGTTATGAT...TATGACTATTGGGAGGTGGACCATGCCATCTTCATCTTGTAATTCCAGTGCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357927.7
3UTR-3UTR GCA 90 bp TTGAGGAGTAACCAGATATTTACAGAGCTTCAAAGTATCTCCACACAAAATACTGGTAACAAAGAGCCCTaGGGAGTTCTACTCTGTCCA +
Preference number: 2 (lower is better)
Translates to: LRSNQIFTELQSISTQNTGNKEP*GVLLCP
Trigger: TGGACAGAGTAGAACTCCGCAGGGCTCTTTGTTACC...AGTATTTTGTGTGGAGATACTTTGAAGCTCTGTAAATATCTGGTTACTCCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357927.7
3UTR-3UTR TCA 90 bp TTGAGGAGTAACCAGATATTTACAGAGCTTCAAAGTATCTCCACACAAAATACTACTGGAATTACAAGATaGAGATGGCATGGTCCACCT +
Preference number: 2 (lower is better)
Translates to: LRSNQIFTELQSISTQNTTGITR*RWHGPP
Trigger: AGGTGGACCATGCCATCTTCATCTTGTAATTCCAGT...AGTATTTTGTGTGGAGATACTTTGAAGCTCTGTAAATATCTGGTTACTCCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357927.7
3UTR-3UTR CCA 90 bp GTTTTGAGGAGTAACCAGATATTTACAGAGCTTCAAAGTATCTCCACACAAAATATCATAACACTAGTATaGACAAACCTGGCAGATACT +
Preference number: 2 (lower is better)
Translates to: VLRSNQIFTELQSISTQNIITLV*TNLADT
Trigger: AGTATCTGCCAGGTTTGTCCATACTAGTGTTATGAT...ATTTTGTGTGGAGATACTTTGAAGCTCTGTAAATATCTGGTTACTCCTCAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290943.10
ENST00000357927.7
3UTR TCA 72 bp TTGCCAGAAAGAGGGAAGAGGCGAAGGCAAAGATCCTaGGGTAACAAAGAGCCCTGCGGAGTTCTACTCTGT +
Preference number: 3 (lower is better)
Translates to: LPERGKRRRQRS*GNKEPCGVLLC
Trigger: ACAGAGTAGAACTCCGCAGGGCTCTTTGTTACCTCAGGATCTTTGCCTTCGCCTCTTCCCTCTTTCTGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357927.7
3UTR CCA 72 bp CATAGATATCATGACAGGTATACAGCGGGGCACTACTaGAACACACAGAAGGGACATCTATCCCACTTTTGT +
Preference number: 3 (lower is better)
Translates to: HRYHDRYTAGHY*NTQKGHLSHFC
Trigger: ACAAAAGTGGGATAGATGTCCCTTCTGTGTGTTCCAGTAGTGCCCCGCTGTATACCTGTCATGATATCTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357927.7
3UTR-3UTR CAA 90 bp TTGAGGAGTAACCAGATATTTACAGAGCTTCAAAGTATCTCCACACAAAATACTACAGATGTAAGCCAATaGATGCTTTTGTTTTTGGAG +
Preference number: 3 (lower is better)
Translates to: LRSNQIFTELQSISTQNTTDVSQ*MLLFLE
Trigger: CTCCAAAAACAAAAGCATCAATTGGCTTACATCTGT...AGTATTTTGTGTGGAGATACTTTGAAGCTCTGTAAATATCTGGTTACTCCTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357927.7
CDS-3UTR TCA 90 bp GAGCCAGCACTGGAATTACAAGATGAAGATGGCATGGTCCACCTCCCAATAGTCCGAAGGCAAAGATCCTaGGGTAACAAAGAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: EPALELQDEDGMVHLPIVRRQRS*GNKEPC
Trigger: GCAGGGCTCTTTGTTACCTCAGGATCTTTGCCTTCG...GACTATTGGGAGGTGGACCATGCCATCTTCATCTTGTAATTCCAGTGCTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357927.7
CDS-3UTR CCA 90 bp AGATATCATGACAGGTATACAGCGGGGCACTACTGGAACACACAGAAGGGACATACAGCGGGGCACTACTaGAACACACAGAAGGGACAT +
Preference number: 4 (lower is better)
Translates to: RYHDRYTAGHYWNTQKGHTAGHY*NTQKGH
Trigger: ATGTCCCTTCTGTGTGTTCCAGTAGTGCCCCGCTGT...ATGTCCCTTCTGTGTGTTCCAGTAGTGCCCCGCTGTATACCTGTCATGATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357927.7
CDS-3UTR GCA 90 bp AGATATCATGACAGGTATACAGCGGGGCACTACTGGAACACACAGAAGGGACATGGTAACAAAGAGCCCTaGGGAGTTCTACTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RYHDRYTAGHYWNTQKGHGNKEP*GVLLCP
Trigger: TGGACAGAGTAGAACTCCGCAGGGCTCTTTGTTACC...ATGTCCCTTCTGTGTGTTCCAGTAGTGCCCCGCTGTATACCTGTCATGATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357927.7
3UTR CAA 72 bp CTACTGGAACACACAGAAGGGACATCTATCCCACTTTaGTGTCAATATCATGGGCTTTCTGGTGGAGGGGAT +
Preference number: 4 (lower is better)
Translates to: LLEHTEGTSIPL*CQYHGLSGGGD
Trigger: ATCCCCTCCACCAGAAAGCCCATGATATTGACACAAAAGTGGGATAGATGTCCCTTCTGTGTGTTCCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357927.7
CDS-3UTR TCA 90 bp CCAGCACTGGAATTACAAGATGAAGATGGCATGGTCCACCTCCCAATAGTCATAACTGGAATTACAAGATaGAGATGGCATGGTCCACCT +
Preference number: 4 (lower is better)
Translates to: PALELQDEDGMVHLPIVITGITR*RWHGPP
Trigger: AGGTGGACCATGCCATCTTCATCTTGTAATTCCAGT...TATGACTATTGGGAGGTGGACCATGCCATCTTCATCTTGTAATTCCAGTGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357927.7
CDS-3UTR TCA 90 bp TTGAGGAGTAACCAGATATTTACAGAGCTTCAAAGTATCTCCACACAAAATACTAACACAAGTCATCCATaGAATGCTAAATCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: LRSNQIFTELQSISTQNTNTSHP*NAKSSG
Trigger: CCCACTAGATTTAGCATTTCATGGATGACTTGTGTT...AGTATTTTGTGTGGAGATACTTTGAAGCTCTGTAAATATCTGGTTACTCCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290943.10
ENST00000357927.7
CDS-3UTR TCA 90 bp GTTTTGAGGAGTAACCAGATATTTACAGAGCTTCAAAGTATCTCCACACAAAATAACACAAGTCATCCATaGAATGCTAAATCTAGTGGG +
Preference number: 4 (lower is better)
Translates to: VLRSNQIFTELQSISTQNNTSHP*NAKSSG
Trigger: CCCACTAGATTTAGCATTTCATGGATGACTTGTGTT...ATTTTGTGTGGAGATACTTTGAAGCTCTGTAAATATCTGGTTACTCCTCAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290943.10
ENST00000357927.7
CDS-3UTR TCA 90 bp GTTTTGAGGAGTAACCAGATATTTACAGAGCTTCAAAGTATCTCCACACAAAATTTGATGACTGAAGGATaGGGAAAATCTTGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: VLRSNQIFTELQSISTQNLMTEG*GKSCQK
Trigger: TTTCTGGCAAGATTTTCCTCATCCTTCAGTCATCAA...ATTTTGTGTGGAGATACTTTGAAGCTCTGTAAATATCTGGTTACTCCTCAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357927.7
CDS-3UTR GCA 90 bp AGTATGGACAAACCTGGCAGATACTCTTTAAGTCTCCTACTATATATGGTAATATTCAGGCTTCATAGCTaGTGTTTCTTGATTGTCATT +
Preference number: 4 (lower is better)
Translates to: SMDKPGRYSLSLLLYMVIFRLHS*CFLIVI
Trigger: AATGACAATCAAGAAACAGCAGCTATGAAGCCTGAA...TATTACCATATATAGTAGGAGACTTAAAGAGTATCTGCCAGGTTTGTCCATACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290943.10
CDS-3UTR CAA 90 bp AGATATCATGACAGGTATACAGCGGGGCACTACTGGAACACACAGAAGGGACATAGGATGAGGAAAATCTaGCCAGAAAGAGGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: RYHDRYTAGHYWNTQKGHRMRKI*PERGKR
Trigger: CCTCTTCCCTCTTTCTGGCAAGATTTTCCTCATCCT...ATGTCCCTTCTGTGTGTTCCAGTAGTGCCCCGCTGTATACCTGTCATGATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357927.7
CDS-3UTR CAA 90 bp AGATATCATGACAGGTATACAGCGGGGCACTACTGGAACACACAGAAGGGACATACAGATGTAAGCCAATaGATGCTTTTGTTTTTGGAG +
Preference number: 5 (lower is better)
Translates to: RYHDRYTAGHYWNTQKGHTDVSQ*MLLFLE
Trigger: CTCCAAAAACAAAAGCATCAATTGGCTTACATCTGT...ATGTCCCTTCTGTGTGTTCCAGTAGTGCCCCGCTGTATACCTGTCATGATATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357927.7
CDS-3UTR CAA 90 bp TTGAGGAGTAACCAGATATTTACAGAGCTTCAAAGTATCTCCACACAAAATACTATGAGGGCTGTTCTTTaGAAATTGTCAACGGCATGT +
Preference number: 5 (lower is better)
Translates to: LRSNQIFTELQSISTQNTMRAVL*KLSTAC
Trigger: ACATGCCGTTGACAATTTCAAAAGAACAGCCCTCAT...AGTATTTTGTGTGGAGATACTTTGAAGCTCTGTAAATATCTGGTTACTCCTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290943.10
CDS-3UTR CAA 90 bp AGTATGGACAAACCTGGCAGATACTCTTTAAGTCTCCTACTATATATGGTAATAGGAGTGTTTCCCTCCTaGTTTAGTGCTTCAATATTT +
Preference number: 5 (lower is better)
Translates to: SMDKPGRYSLSLLLYMVIGVFPS*FSASIF
Trigger: AAATATTGAAGCACTAAACAAGGAGGGAAACACTCC...TATTACCATATATAGTAGGAGACTTAAAGAGTATCTGCCAGGTTTGTCCATACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290943.10
CDS-3UTR CAA 90 bp TTGAGGAGTAACCAGATATTTACAGAGCTTCAAAGTATCTCCACACAAAATACTCATAGCTGCTGTTTCTaGATTGTCATTTCGAAGATG +
Preference number: 5 (lower is better)
Translates to: LRSNQIFTELQSISTQNTHSCCF*IVISKM
Trigger: CATCTTCGAAATGACAATCAAGAAACAGCAGCTATG...AGTATTTTGTGTGGAGATACTTTGAAGCTCTGTAAATATCTGGTTACTCCTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290943.10