RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANKRD13A (Homo sapiens)

Ensembl gene IDs: ENSG00000076513

Ensembl transcript IDs: ENST00000261739.9, ENST00000546476.1, ENST00000547419.6, ENST00000547639.5, ENST00000549826.1, ENST00000550404.1, ENST00000551491.1, ENST00000553025.5, ENST00000553246.1, ENST00000553251.5

Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCCCTGGTTCTGCACCTCTGCATAAAGAAGGGGCAGTTGTTGCCTaGTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: VPGSAPLHKEGAVVA*CMHARCRPLALGPW
Trigger: CCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAACTGCCCCTTCTTTATGCAGAGGTGCAGAACCAGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR TCA 90 bp AGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTaGCAGCCCACAGCCTCTGCTTTGTGCAGAGGCTCACAGGCTGAA +
Preference number: 1 (lower is better)
Translates to: RCRPLALGPWLTQHL*QPTASALCRGSQAE
Trigger: TTCAGCCTGTGAGCCTCTGCACAAAGCAGAGGCTGTGGGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000547419.6
ENST00000551491.1
3UTR GCA 90 bp CCTGGTTCTGCACCTCTGCATAAAGAAGGGGCAGTTGTTGCCTGCTaGATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTG +
Preference number: 1 (lower is better)
Translates to: PGSAPLHKEGAVVAC*MHARCRPLALGPWL
Trigger: CAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAACTGCCCCTTCTTTATGCAGAGGTGCAGAACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR GCA 90 bp AGGGAGCAGCCTGGATGGGCCCAGGAGTCCCTGGTTCTGCACCTCTaGATAAAGAAGGGGCAGTTGTTGCCTGCTGCATGCACGCAAGGT +
Preference number: 1 (lower is better)
Translates to: REQPGWAQESLVLHL*IKKGQLLPAACTQG
Trigger: ACCTTGCGTGCATGCAGCAGGCAACAACTGCCCCTTCTTTATGCAGAGGTGCAGAACCAGGGACTCCTGGGCCCATCCAGGCTGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR GCA 90 bp AGCTCCCATTCCTCCAGCTCTTTGGCAGAGAGCTCCATGGCTAGCTaGAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGG +
Preference number: 1 (lower is better)
Translates to: SSHSSSSLAESSMAS*KSLSKRLVSLRALG
Trigger: CCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAGCTAGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAATGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR CCA 90 bp GGAGCCGGAGCTCCCATTCCTCCAGCTCTTTGGCAGAGAGCTCCATaGCTAGCTGCAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGG +
Preference number: 1 (lower is better)
Translates to: GAGAPIPPALWQRAP*LAASHYQNGLSRSG
Trigger: CCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAGCTAGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAATGGGAGCTCCGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR CCA 90 bp CAGCCTCTTCCTCCTGGAGCCGGAGCTCCCATTCCTCCAGCTCTTTaGCAGAGAGCTCCATGGCTAGCTGCAAGTCATTATCAAAACGGC +
Preference number: 1 (lower is better)
Translates to: QPLPPGAGAPIPPAL*QRAPWLAASHYQNG
Trigger: GCCGTTTTGATAATGACTTGCAGCTAGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAATGGGAGCTCCGGCTCCAGGAGGAAGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR GCA 90 bp TTCAGTGCAGCCTGTGGGAATGAATACACGGGCCACAGTGAGCAGTaGCCTTGGCTGTATTCCCCAGGGTTCTGTATGTTGTGCGATGGT +
Preference number: 1 (lower is better)
Translates to: FSAACGNEYTGHSEQ*PWLYSPGFCMLCDG
Trigger: ACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTGCTCACTGTGGCCCGTGTATTCATTCCCACAGGCTGCACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR GCA 90 bp GCAGCATGGGGCTTGTTAACCTGGGCAGGAAGGCTGGGAGGAGCATaGCACCTTTGCAGTGATGAACTGAGCGAAGTGAGGCATTCTAAT +
Preference number: 1 (lower is better)
Translates to: AAWGLLTWAGRLGGA*HLCSDELSEVRHSN
Trigger: ATTAGAATGCCTCACTTCGCTCAGTTCATCACTGCAAAGGTGGCATGCTCCTCCCAGCCTTCCTGCCCAGGTTAACAAGCCCCATGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 90 bp AGTTGGCTTCAAGGGATAGCATTGATGCAGAGCTTTGATGTTGGCTaGGCTTCCCTTACCCCACAAGAGCCAGTTCCCCTCCAGGAGGAC +
Preference number: 1 (lower is better)
Translates to: SWLQGIALMQSFDVG*ASLTPQEPVPLQED
Trigger: GTCCTCCTGGAGGGGAACTGGCTCTTGTGGGGTAAGGGAAGCCCAGCCAACATCAAAGCTCTGCATCAATGCTATCCCTTGAAGCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 90 bp CCGTGGTTTTCAGCTCCCTTTCTGGTTGCAAATCAATCCTTCCTCTaGAGTGAGTCTAGGGCATGCGGGCTCTTCCTAGGTGTCTACGTG +
Preference number: 1 (lower is better)
Translates to: PWFSAPFLVANQSFL*SESRACGLFLGVYV
Trigger: CACGTAGACACCTAGGAAGAGCCCGCATGCCCTAGACTCACTCCAGAGGAAGGATTGATTTGCAACCAGAAAGGGAGCTGAAAACCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR TCA 90 bp CTCACAAAGCAGTTGGCTTCAAGGGATAGCATTGATGCAGAGCTTTaGTGTTGGCTGGGCTTCCCTTACCCCACAAGAGCCAGTTCCCCT +
Preference number: 1 (lower is better)
Translates to: LTKQLASRDSIDAEL*CWLGFPYPTRASSP
Trigger: AGGGGAACTGGCTCTTGTGGGGTAAGGGAAGCCCAGCCAACATCAAAGCTCTGCATCAATGCTATCCCTTGAAGCCAACTGCTTTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR TCA 90 bp TCTGTGACAGCCCACAGCCTCTGCTTTGTGCAGAGGCTCACAGGCTaGAAGGTCTATTTGTCAGTGAGTGACAGCTGTAAGACTTGCTGG +
Preference number: 1 (lower is better)
Translates to: SVTAHSLCFVQRLTG*KVYLSVSDSCKTCW
Trigger: CCAGCAAGTCTTACAGCTGTCACTCACTGACAAATAGACCTTTCAGCCTGTGAGCCTCTGCACAAAGCAGAGGCTGTGGGCTGTCACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR GCA 90 bp GGCTTGTTAACCTGGGCAGGAAGGCTGGGAGGAGCATGCCACCTTTaGAGTGATGAACTGAGCGAAGTGAGGCATTCTAATGTTCTACTG +
Preference number: 1 (lower is better)
Translates to: GLLTWAGRLGGACHL*SDELSEVRHSNVLL
Trigger: CAGTAGAACATTAGAATGCCTCACTTCGCTCAGTTCATCACTGCAAAGGTGGCATGCTCCTCCCAGCCTTCCTGCCCAGGTTAACAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 90 bp GCAGCCTGTGGGAATGAATACACGGGCCACAGTGAGCAGTGCCCTTaGCTGTATTCCCCAGGGTTCTGTATGTTGTGCGATGGTTATATA +
Preference number: 1 (lower is better)
Translates to: AACGNEYTGHSEQCP*LYSPGFCMLCDGYI
Trigger: TATATAACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTGCTCACTGTGGCCCGTGTATTCATTCCCACAGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR TCA 90 bp TCTGCTTTGTGCAGAGGCTCACAGGCTGAAAGGTCTATTTGTCAGTaGGTGACAGCTGTAAGACTTGCTGGAGCTCAGCCTCTTCCTCCT +
Preference number: 1 (lower is better)
Translates to: SALCRGSQAERSICQ*VTAVRLAGAQPLPP
Trigger: AGGAGGAAGAGGCTGAGCTCCAGCAAGTCTTACAGCTGTCACTCACTGACAAATAGACCTTTCAGCCTGTGAGCCTCTGCACAAAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR GCA 90 bp GACCACAGAGGTGTCAGAACAGCCCAACACTGGCTTGCTTTTAGTTaGCATTTGAAACAAGCAGCATGGGGCTTGTTAACCTGGGCAGGA +
Preference number: 1 (lower is better)
Translates to: DHRGVRTAQHWLAFS*HLKQAAWGLLTWAG
Trigger: TCCTGCCCAGGTTAACAAGCCCCATGCTGCTTGTTTCAAATGGCAACTAAAAGCAAGCCAGTGTTGGGCTGTTCTGACACCTCTGTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR TCA 90 bp TCAGGTTCCCCTAGCTGCTCCTTCAGGGACAGGATTAGCTGCCTTTaGTTTAGCCTGGAGAATCCTGCTCTCAAAAGAATTGCCTTTACA +
Preference number: 1 (lower is better)
Translates to: SGSPSCSFRDRISCL*FSLENPALKRIAFT
Trigger: TGTAAAGGCAATTCTTTTGAGAGCAGGATTCTCCAGGCTAAATCAAAGGCAGCTAATCCTGTCCCTGAAGGAGCAGCTAGGGGAACCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 90 bp GTGTCTACGTGGAAATCCTTCACTCATGCAGGTGTAGAACACACCTaGTTTGGTTCTGTGTGTTCCAATATTTTGGCCAGCTTGCCCACT +
Preference number: 1 (lower is better)
Translates to: VSTWKSFTHAGVEHT*FGSVCSNILASLPT
Trigger: AGTGGGCAAGCTGGCCAAAATATTGGAACACACAGAACCAAACCAGGTGTGTTCTACACCTGCATGAGTGAAGGATTTCCACGTAGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 90 bp TCTTCCTATCCCCAAAGAAGCACAATAGAAGAAATAGACGCAAAATaGAGGAGGGTGTTGTTTACCAGGTTATTTCAGTGCAGCCTGTGG +
Preference number: 1 (lower is better)
Translates to: SSYPQRSTIEEIDAK*RRVLFTRLFQCSLW
Trigger: CCACAGGCTGCACTGAAATAACCTGGTAAACAACACCCTCCTCCATTTTGCGTCTATTTCTTCTATTGTGCTTCTTTGGGGATAGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 90 bp CTAGCTGCTCCTTCAGGGACAGGATTAGCTGCCTTTGATTTAGCCTaGAGAATCCTGCTCTCAAAAGAATTGCCTTTACAAATTCAAATC +
Preference number: 1 (lower is better)
Translates to: LAAPSGTGLAAFDLA*RILLSKELPLQIQI
Trigger: GATTTGAATTTGTAAAGGCAATTCTTTTGAGAGCAGGATTCTCCAGGCTAAATCAAAGGCAGCTAATCCTGTCCCTGAAGGAGCAGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 90 bp GCAGTGCCCTTGGCTGTATTCCCCAGGGTTCTGTATGTTGTGCGATaGTTATATACAAGAGGGTTTGACAAAAGAGAGTTAACTACTAAA +
Preference number: 1 (lower is better)
Translates to: AVPLAVFPRVLYVVR*LYTRGFDKRELTTK
Trigger: TTTAGTAGTTAACTCTCTTTTGTCAAACCCTCTTGTATATAACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR TCA 90 bp AGAATTGCCTTTACAAATTCAAATCAGATCCTTCGATGCGTGCAGTaGGGTGATGTGAAACTATTAGTAATGTTTAAGGCTAAGGCAACA +
Preference number: 1 (lower is better)
Translates to: RIAFTNSNQILRCVQ*GDVKLLVMFKAKAT
Trigger: TGTTGCCTTAGCCTTAAACATTACTAATAGTTTCACATCACCTCACTGCACGCATCGAAGGATCTGATTTGAATTTGTAAAGGCAATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR GCA 90 bp TGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTACAGCCCACAGCCTCTaGTTTGTGCAGAGGCTCACA +
Preference number: 2 (lower is better)
Translates to: CCLLHARKVQALSPRALVTAHSL*FVQRLT
Trigger: TGTGAGCCTCTGCACAAAGCAGAGGCTGTGGGCTGT...AACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
3UTR-3UTR CCA 90 bp AAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTGACAGCCGTGAGGAGGCTCTCCTaGATGGCCCTCTCATACTGG +
Preference number: 2 (lower is better)
Translates to: KVQALSPRALVDTASVTAVRRLS*MALSYW
Trigger: CCAGTATGAGAGGGCCATCCAGGAGAGCCTCCTCAC...GGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR-3UTR GCA 90 bp CTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCAACAGCCTCTGCTTTGTaGAGAGGCTCACAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: LHARKVQALSPRALVDTATASAL*RGSQAE
Trigger: TTCAGCCTGTGAGCCTCTGCACAAAGCAGAGGCTGT...TGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
3UTR-3UTR GCA 90 bp ATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGACAGCCCACAGCCTCTaGTTTGTGCAGAGGCTCACA +
Preference number: 2 (lower is better)
Translates to: MHARCRPLALGPWLTQHLTAHSL*FVQRLT
Trigger: TGTGAGCCTCTGCACAAAGCAGAGGCTGTGGGCTGT...CAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
3UTR-3UTR CCA 90 bp TATTTGTCAGTGAGTGACAGCTGTAAGACTTGCTGGAGCTCAGCCTCTTCCTCCTCTCGCTCAGGGCGCTaGGGCACAGGCCTTCTGTGC +
Preference number: 2 (lower is better)
Translates to: YLSVSDSCKTCWSSASSSSRSGR*GTGLLC
Trigger: GCACAGAAGGCCTGTGCCCCAGCGCCCTGAGCGAGA...GGAGGAAGAGGCTGAGCTCCAGCAAGTCTTACAGCTGTCACTCACTGACAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR CAA 90 bp TCAGCCTCTTCCTCCTGGAGCCGGAGCTCCCATTCCTCCAGCTCTTaGGCAGAGAGCTCCATGGCTAGCTGCAAGTCATTATCAAAACGG +
Preference number: 2 (lower is better)
Translates to: SASSSWSRSSHSSSS*AESSMASCKSLSKR
Trigger: CCGTTTTGATAATGACTTGCAGCTAGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAATGGGAGCTCCGGCTCCAGGAGGAAGAGGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR-3UTR GCA 90 bp GTGAGCAGTGCCCTTGGCTGTATTCCCCAGGGTTCTGTATGTTGTGCGATGGTTAGAAGGGGCAGTTGTTaGCTGCTGCATGCACGCAAG +
Preference number: 2 (lower is better)
Translates to: VSSALGCIPQGSVCCAMVRRGSC*LLHARK
Trigger: CTTGCGTGCATGCAGCAGGCAACAACTGCCCCTTCT...AACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR GCA 90 bp GTGAGCAGTGCCCTTGGCTGTATTCCCCAGGGTTCTGTATGTTGTGCGATGGTTACAGCCTCTGCTTTGTaGAGAGGCTCACAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: VSSALGCIPQGSVCCAMVTASAL*RGSQAE
Trigger: TTCAGCCTGTGAGCCTCTGCACAAAGCAGAGGCTGT...AACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR GCA 90 bp TTCTGTGTGTTCCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGTGCATGCACGCAAGGTaGAGGCCCTTAGCCCTAGGG +
Preference number: 2 (lower is better)
Translates to: FCVFQYFGQLAHFKNKPQCMHAR*RPLALG
Trigger: CCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCA...CTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGGAACACACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CAA 90 bp AGAGGTGTCAGAACAGCCCAACACTGGCTTGCTTTTAGTTGCCATTaGAAACAAGCAGCATGGGGCTTGTTAACCTGGGCAGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: RGVRTAQHWLAFSCH*KQAAWGLLTWAGRL
Trigger: CAGCCTTCCTGCCCAGGTTAACAAGCCCCATGCTGCTTGTTTCAAATGGCAACTAAAAGCAAGCCAGTGTTGGGCTGTTCTGACACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR GCA 90 bp TATTTGTCAGTGAGTGACAGCTGTAAGACTTGCTGGAGCTCAGCCTCTTCCTCCACAGCCTCTGCTTTGTaGAGAGGCTCACAGGCTGAA +
Preference number: 2 (lower is better)
Translates to: YLSVSDSCKTCWSSASSSTASAL*RGSQAE
Trigger: TTCAGCCTGTGAGCCTCTGCACAAAGCAGAGGCTGT...GGAGGAAGAGGCTGAGCTCCAGCAAGTCTTACAGCTGTCACTCACTGACAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR-3UTR CCA 90 bp AAAGCTGGTAGTAAAAATGTGACCTGCAAGCCAATACAGCTAATGGAAAGTGATCCCCAGGGAGCAGCCTaGATGGGCCCAGGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: KAGSKNVTCKPIQLMESDPQGAA*MGPGVP
Trigger: AGGGACTCCTGGGCCCATCCAGGCTGCTCCCTGGGG...ATCACTTTCCATTAGCTGTATTGGCTTGCAGGTCACATTTTTACTACCAGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR GCA 90 bp GTGAGCAGTGCCCTTGGCTGTATTCCCCAGGGTTCTGTATGTTGTGCGATGGTTGAAATCCTTCACTCATaGAGGTGTAGAACACACCTG +
Preference number: 2 (lower is better)
Translates to: VSSALGCIPQGSVCCAMVEILHS*RCRTHL
Trigger: CAGGTGTGTTCTACACCTGCATGAGTGAAGGATTTC...AACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR TCA 90 bp TTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGACAGGATTAGCTCTTCGATGCGTGCAGTaGGGTGATGTGAAACTATTA +
Preference number: 2 (lower is better)
Translates to: FKNKPQVPLAAPSGTGLALRCVQ*GDVKLL
Trigger: TAATAGTTTCACATCACCTCACTGCACGCATCGAAG...AGCTAATCCTGTCCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR CCA 90 bp GTGAGCAGTGCCCTTGGCTGTATTCCCCAGGGTTCTGTATGTTGTGCGATGGTTGCCTTTGATTTAGCCTaGAGAATCCTGCTCTCAAAA +
Preference number: 2 (lower is better)
Translates to: VSSALGCIPQGSVCCAMVAFDLA*RILLSK
Trigger: TTTTGAGAGCAGGATTCTCCAGGCTAAATCAAAGGC...AACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR CCA 90 bp TGTGACGTTGCCTATACTGGCCTCATGTGCAGAAGGAATTTTGGTCAGACAATGAGCCATGGAGCTCCGTaGTTTTCAGCTCCCTTTCTG +
Preference number: 2 (lower is better)
Translates to: CDVAYTGLMCRRNFGQTMSHGAP*FSAPFL
Trigger: CAGAAAGGGAGCTGAAAACCACGGAGCTCCATGGCT...CATTGTCTGACCAAAATTCCTTCTGCACATGAGGCCAGTATAGGCAACGTCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR GCA 90 bp TATTTGTCAGTGAGTGACAGCTGTAAGACTTGCTGGAGCTCAGCCTCTTCCTCCAGCTCCATGGCTAGCTaGAAGTCATTATCAAAACGG +
Preference number: 2 (lower is better)
Translates to: YLSVSDSCKTCWSSASSSSSMAS*KSLSKR
Trigger: CCGTTTTGATAATGACTTGCAGCTAGCCATGGAGCT...GGAGGAAGAGGCTGAGCTCCAGCAAGTCTTACAGCTGTCACTCACTGACAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR-3UTR CCA 90 bp AAAGCTGGTAGTAAAAATGTGACCTGCAAGCCAATACAGCTAATGGAAAGTGATCCCTTAGCCTGGAGATaGGGCCTGCAATCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: KAGSKNVTCKPIQLMESDPLAWR*GLQSLV
Trigger: GACCAGGGATTGCAGGCCCCATCTCCAGGCTAAGGG...ATCACTTTCCATTAGCTGTATTGGCTTGCAGGTCACATTTTTACTACCAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR GCA 90 bp AAAGCTGGTAGTAAAAATGTGACCTGCAAGCCAATACAGCTAATGGAAAGTGATGCAGTTGTTGCCTGCTaGATGCACGCAAGGTGCAGG +
Preference number: 2 (lower is better)
Translates to: KAGSKNVTCKPIQLMESDAVVAC*MHARCR
Trigger: CCTGCACCTTGCGTGCATGCAGCAGGCAACAACTGC...ATCACTTTCCATTAGCTGTATTGGCTTGCAGGTCACATTTTTACTACCAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR GCA 90 bp CACATCCACAACATTGCTTTAAACTTCTGTGTTCTAATCGTCAGCTCTTTCGGCGGTGAGGTCCCCTTGTaGACCAAATTGGTGTTCCAC +
Preference number: 2 (lower is better)
Translates to: HIHNIALNFCVLIVSSFGGEVPL*TKLVFH
Trigger: GTGGAACACCAATTTGGTGCACAAGGGGACCTCACC...GCCGAAAGAGCTGACGATTAGAACACAGAAGTTTAAAGCAATGTTGTGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
3UTR-3UTR CCA 90 bp GTGGTGAGGTCCCCTTGTGCACCAAATTGGTGTTCCACAGTTCCCAGCAAAGATATCAATCCTAAGGAGTaGCTCAATTCTTGCTCAATG +
Preference number: 2 (lower is better)
Translates to: VVRSPCAPNWCSTVPSKDINPKE*LNSCSM
Trigger: CATTGAGCAAGAATTGAGCCACTCCTTAGGATTGAT...ATCTTTGCTGGGAACTGTGGAACACCAATTTGGTGCACAAGGGGACCTCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
3UTR-3UTR GCA 90 bp CTTCAAGGGATAGCATTGATGCAGAGCTTTGATGTTGGCTGGGCTTCCCTTACCTGGCTTGCTTTTAGTTaGCATTTGAAACAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LQGIALMQSFDVGWASLTWLAFS*HLKQAA
Trigger: TGCTGCTTGTTTCAAATGGCAACTAAAAGCAAGCCA...GGTAAGGGAAGCCCAGCCAACATCAAAGCTCTGCATCAATGCTATCCCTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR GCA 90 bp GGTGAGGTCCCCTTGTGCACCAAATTGGTGTTCCACAGTTCCCAGCAAAGATTCTCAATTCTTGCTCAATaGACGACAAGCACACATTTA +
Preference number: 2 (lower is better)
Translates to: GEVPLCTKLVFHSSQQRFSILAQ*TTSTHL
Trigger: TAAATGTGTGCTTGTCGTGCATTGAGCAAGAATTGA...GAATCTTTGCTGGGAACTGTGGAACACCAATTTGGTGCACAAGGGGACCTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
3UTR-3UTR GCA 90 bp GAGGACCACAGAGGTGTCAGAACAGCCCAACACTGGCTTGCTTTTAGTTGCCATATATATGAAAAACACTaGAACAGGTTGACACAATGC +
Preference number: 2 (lower is better)
Translates to: EDHRGVRTAQHWLAFSCHIYEKH*NRLTQC
Trigger: GCATTGTGTCAACCTGTTGCAGTGTTTTTCATATAT...ATGGCAACTAAAAGCAAGCCAGTGTTGGGCTGTTCTGACACCTCTGTGGTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR CCA 90 bp TCCCCAGGGTTCTGTATGTTGTGCGATGGTTATATACAAGAGGGTTTGACAAAAGGTGTAGAACACACCTaGTTTGGTTCTGTGTGTTCC +
Preference number: 2 (lower is better)
Translates to: SPGFCMLCDGYIQEGLTKGVEHT*FGSVCS
Trigger: GGAACACACAGAACCAAACCAGGTGTGTTCTACACC...TTTTGTCAAACCCTCTTGTATATAACCATCGCACAACATACAGAACCCTGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR TCA 90 bp CTGCTCCACCAGAGAGAGGGGAAACTCTTCACACATCCACAACATTGCTTTAAACTGTGCGTATTTTGGTaGTCACATTCACATTGTTTA +
Preference number: 2 (lower is better)
Translates to: LLHQREGKLFTHPQHCFKLCVFW*SHSHCL
Trigger: TAAACAATGTGAATGTGATCACCAAAATACGCACAG...TTTAAAGCAATGTTGTGGATGTGTGAAGAGTTTCCCCTCTCTCTGGTGGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553025.5
3UTR GCA 72 bp GCACCTCTGCATAAAGAAGGGGCAGTTGTTGCCTGCTaGATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGG +
Preference number: 3 (lower is better)
Translates to: APLHKEGAVVAC*MHARCRPLALG
Trigger: CCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAACTGCCCCTTCTTTATGCAGAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 72 bp GAAAGTGATGATGCTCTCCTCCCCTTAGCCTGGAGATaGGGCCTGCAATCCCTGGTCCCTTCTCCACCCCAG +
Preference number: 3 (lower is better)
Translates to: ESDDALLPLAWR*GLQSLVPSPPQ
Trigger: CTGGGGTGGAGAAGGGACCAGGGATTGCAGGCCCCATCTCCAGGCTAAGGGGAGGAGAGCATCATCACTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR GCA 72 bp TCTGCACCTCTGCATAAAGAAGGGGCAGTTGTTGCCTaGTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTA +
Preference number: 3 (lower is better)
Translates to: SAPLHKEGAVVA*CMHARCRPLAL
Trigger: TAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAACTGCCCCTTCTTTATGCAGAGGTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 72 bp CCTCCTGGAGCCGGAGCTCCCATTCCTCCAGCTCTTTaGCAGAGAGCTCCATGGCTAGCTGCAAGTCATTAT +
Preference number: 3 (lower is better)
Translates to: PPGAGAPIPPAL*QRAPWLAASHY
Trigger: ATAATGACTTGCAGCTAGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAATGGGAGCTCCGGCTCCAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR GCA 72 bp GCCTGTGGGAATGAATACACGGGCCACAGTGAGCAGTaGCCTTGGCTGTATTCCCCAGGGTTCTGTATGTTG +
Preference number: 3 (lower is better)
Translates to: ACGNEYTGHSEQ*PWLYSPGFCML
Trigger: CAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTGCTCACTGTGGCCCGTGTATTCATTCCCACAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 72 bp CTAATGGAAAGTGATGATGCTCTCCTCCCCTTAGCCTaGAGATGGGGCCTGCAATCCCTGGTCCCTTCTCCA +
Preference number: 3 (lower is better)
Translates to: LMESDDALLPLA*RWGLQSLVPSP
Trigger: TGGAGAAGGGACCAGGGATTGCAGGCCCCATCTCCAGGCTAAGGGGAGGAGAGCATCATCACTTTCCATTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 72 bp GCACATTCCGTGGTGAGGTCCCCTTGTGCACCAAATTaGTGTTCCACAGTTCCCAGCAAAGATTCCAGCGGG +
Preference number: 3 (lower is better)
Translates to: AHSVVRSPCAPN*CSTVPSKDSSG
Trigger: CCCGCTGGAATCTTTGCTGGGAACTGTGGAACACCAATTTGGTGCACAAGGGGACCTCACCACGGAATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
3UTR GCA 72 bp ACCTGGGCAGGAAGGCTGGGAGGAGCATGCCACCTTTaGAGTGATGAACTGAGCGAAGTGAGGCATTCTAAT +
Preference number: 3 (lower is better)
Translates to: TWAGRLGGACHL*SDELSEVRHSN
Trigger: ATTAGAATGCCTCACTTCGCTCAGTTCATCACTGCAAAGGTGGCATGCTCCTCCCAGCCTTCCTGCCCAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 72 bp GGGAATGAATACACGGGCCACAGTGAGCAGTGCCCTTaGCTGTATTCCCCAGGGTTCTGTATGTTGTGCGAT +
Preference number: 3 (lower is better)
Translates to: GNEYTGHSEQCP*LYSPGFCMLCD
Trigger: ATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTGCTCACTGTGGCCCGTGTATTCATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 72 bp CAAGGGATAGCATTGATGCAGAGCTTTGATGTTGGCTaGGCTTCCCTTACCCCACAAGAGCCAGTTCCCCTC +
Preference number: 3 (lower is better)
Translates to: QGIALMQSFDVG*ASLTPQEPVPL
Trigger: GAGGGGAACTGGCTCTTGTGGGGTAAGGGAAGCCCAGCCAACATCAAAGCTCTGCATCAATGCTATCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR TCA 72 bp GCCCACAGCCTCTGCTTTGTGCAGAGGCTCACAGGCTaGAAGGTCTATTTGTCAGTGAGTGACAGCTGTAAG +
Preference number: 3 (lower is better)
Translates to: AHSLCFVQRLTG*KVYLSVSDSCK
Trigger: CTTACAGCTGTCACTCACTGACAAATAGACCTTTCAGCCTGTGAGCCTCTGCACAAAGCAGAGGCTGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR GCA 72 bp TCCTCCAGCTCTTTGGCAGAGAGCTCCATGGCTAGCTaGAAGTCATTATCAAAACGGCTTGTCTCGCTCAGG +
Preference number: 3 (lower is better)
Translates to: SSSSLAESSMAS*KSLSKRLVSLR
Trigger: CCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAGCTAGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR-3UTR CAA 90 bp TCCCTTTTGAATGAAGAGCCATGGAGCTCCGTGGTTTTCAGCTCCCTTTCTGGTATAAAGAAGGGGCAGTaGTTGCCTGCTGCATGCACG +
Preference number: 3 (lower is better)
Translates to: SLLNEEPWSSVVFSSLSGIKKGQ*LPAACT
Trigger: CGTGCATGCAGCAGGCAACAACTGCCCCTTCTTTAT...ACCAGAAAGGGAGCTGAAAACCACGGAGCTCCATGGCTCTTCATTCAAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR CAA 90 bp TTCTGTGTGTTCCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGAAGAAGGGGCAGTTGTaGCCTGCTGCATGCACGCAA +
Preference number: 3 (lower is better)
Translates to: FCVFQYFGQLAHFKNKPQKKGQL*PAACTQ
Trigger: TTGCGTGCATGCAGCAGGCAACAACTGCCCCTTCTT...CTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGGAACACACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 72 bp CAGGAGGACCACAGAGGTGTCAGAACAGCCCAACACTaGCTTGCTTTTAGTTGCCATTTGAAACAAGCAGCA +
Preference number: 3 (lower is better)
Translates to: QEDHRGVRTAQH*LAFSCHLKQAA
Trigger: TGCTGCTTGTTTCAAATGGCAACTAAAAGCAAGCCAGTGTTGGGCTGTTCTGACACCTCTGTGGTCCTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR GCA 72 bp CTCTTCCTAGGTGTCTACGTGGAAATCCTTCACTCATaGAGGTGTAGAACACACCTGGTTTGGTTCTGTGTG +
Preference number: 3 (lower is better)
Translates to: LFLGVYVEILHS*RCRTHLVWFCV
Trigger: CACACAGAACCAAACCAGGTGTGTTCTACACCTGCATGAGTGAAGGATTTCCACGTAGACACCTAGGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR GCA 72 bp GGTGTCAGAACAGCCCAACACTGGCTTGCTTTTAGTTaGCATTTGAAACAAGCAGCATGGGGCTTGTTAACC +
Preference number: 3 (lower is better)
Translates to: GVRTAQHWLAFS*HLKQAAWGLLT
Trigger: GGTTAACAAGCCCCATGCTGCTTGTTTCAAATGGCAACTAAAAGCAAGCCAGTGTTGGGCTGTTCTGACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR CAA 90 bp CAACATTGCTTTAAACTTCTGTGTTCTAATCGTCAGCTCTTTCGGCCTTCCAATCGTGGTGAGGTCCCCTaGTGCACCAAATTGGTGTTC +
Preference number: 3 (lower is better)
Translates to: QHCFKLLCSNRQLFRPSNRGEVP*CTKLVF
Trigger: GAACACCAATTTGGTGCACAAGGGGACCTCACCACG...ATTGGAAGGCCGAAAGAGCTGACGATTAGAACACAGAAGTTTAAAGCAATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
3UTR TCA 72 bp CCTAGCTGCTCCTTCAGGGACAGGATTAGCTGCCTTTaGTTTAGCCTGGAGAATCCTGCTCTCAAAAGAATT +
Preference number: 3 (lower is better)
Translates to: PSCSFRDRISCL*FSLENPALKRI
Trigger: AATTCTTTTGAGAGCAGGATTCTCCAGGCTAAATCAAAGGCAGCTAATCCTGTCCCTGAAGGAGCAGCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR CAA 90 bp TTCGGCCTTCCAATGTCCCTGTCTTTCAGATCAAACTCTTCATTGAAGTACTCAGGAGTGGCTCAATTCTaGCTCAATGCACGACAAGCA +
Preference number: 3 (lower is better)
Translates to: FGLPMSLSFRSNSSLKYSGVAQF*LNARQA
Trigger: TGCTTGTCGTGCATTGAGCAAGAATTGAGCCACTCC...TGAGTACTTCAATGAAGAGTTTGATCTGAAAGACAGGGACATTGGAAGGCCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
3UTR GCA 72 bp TGCCCTTGGCTGTATTCCCCAGGGTTCTGTATGTTGTaGGATGGTTATATACAAGAGGGTTTGACAAAAGAG +
Preference number: 3 (lower is better)
Translates to: CPWLYSPGFCML*DGYIQEGLTKE
Trigger: CTCTTTTGTCAAACCCTCTTGTATATAACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 72 bp TGGAAATCCTTCACTCATGCAGGTGTAGAACACACCTaGTTTGGTTCTGTGTGTTCCAATATTTTGGCCAGC +
Preference number: 3 (lower is better)
Translates to: WKSFTHAGVEHT*FGSVCSNILAS
Trigger: GCTGGCCAAAATATTGGAACACACAGAACCAAACCAGGTGTGTTCTACACCTGCATGAGTGAAGGATTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CCA 72 bp CCTTCAGGGACAGGATTAGCTGCCTTTGATTTAGCCTaGAGAATCCTGCTCTCAAAAGAATTGCCTTTACAA +
Preference number: 3 (lower is better)
Translates to: PSGTGLAAFDLA*RILLSKELPLQ
Trigger: TTGTAAAGGCAATTCTTTTGAGAGCAGGATTCTCCAGGCTAAATCAAAGGCAGCTAATCCTGTCCCTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR TCA 72 bp CAAAGGCGGCTGCTGCTCTTATATATAAAAGCACCCTaGCTCTGCAATAACTTGTCTTGTTATCACTCCTTG +
Preference number: 3 (lower is better)
Translates to: QRRLLLLYIKAP*LCNNLSCYHSL
Trigger: CAAGGAGTGATAACAAGACAAGTTATTGCAGAGTCAGGGTGCTTTTATATATAAGAGCAGCAGCCGCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR GCA 72 bp GTAGCTGGTATCAATCCTAAGGAGTGGCTCAATTCTTaGTCAATGCACGACAAGCACACATTTAATTCTGAG +
Preference number: 3 (lower is better)
Translates to: VAGINPKEWLNS*SMHDKHTFNSE
Trigger: CTCAGAATTAAATGTGTGCTTGTCGTGCATTGAGCAAGAATTGAGCCACTCCTTAGGATTGATACCAGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
3UTR CCA 72 bp CCCCAAAGAAGCACAATAGAAGAAATAGACGCAAAATaGAGGAGGGTGTTGTTTACCAGGTTATTTCAGTGC +
Preference number: 3 (lower is better)
Translates to: PQRSTIEEIDAK*RRVLFTRLFQC
Trigger: GCACTGAAATAACCTGGTAAACAACACCCTCCTCCATTTTGCGTCTATTTCTTCTATTGTGCTTCTTTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR CAA 90 bp CATCCACAACATTGCTTTAAACTTCTGTGTTCTAATCGTCAGCTCTTTCGGCCTAGATCAAACTCTTCATaGAAGTACTCATCAGGCGTG +
Preference number: 3 (lower is better)
Translates to: HPQHCFKLLCSNRQLFRPRSNSS*KYSSGV
Trigger: CACGCCTGATGAGTACTTCAATGAAGAGTTTGATCT...AGGCCGAAAGAGCTGACGATTAGAACACAGAAGTTTAAAGCAATGTTGTGGATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
3UTR TCA 72 bp TTTCCTCCTCGGTCAGATGTTCTGTGCGTATTTTGGTaGTCACATTCACATTGTTTACTGTGTAAACCTCAC +
Preference number: 3 (lower is better)
Translates to: FPPRSDVLCVFW*SHSHCLLCKPH
Trigger: GTGAGGTTTACACAGTAAACAATGTGAATGTGATCACCAAAATACGCACAGAACATCTGACCGAGGAGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
3UTR GCA 72 bp GTATCAATCCTAAGGAGTGGCTCAATTCTTGCTCAATaGACGACAAGCACACATTTAATTCTGAGCACCATT +
Preference number: 3 (lower is better)
Translates to: VSILRSGSILAQ*TTSTHLILSTI
Trigger: AATGGTGCTCAGAATTAAATGTGTGCTTGTCGTGCATTGAGCAAGAATTGAGCCACTCCTTAGGATTGATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
3UTR CCA 72 bp TTGGCTGTATTCCCCAGGGTTCTGTATGTTGTGCGATaGTTATATACAAGAGGGTTTGACAAAAGAGAGTTA +
Preference number: 3 (lower is better)
Translates to: LAVFPRVLYVVR*LYTRGFDKREL
Trigger: TAACTCTCTTTTGTCAAACCCTCTTGTATATAACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR-3UTR CAA 90 bp AACATTGCTTTAAACTTCTGTGTTCTAATCGTCAGCTCTTTCGGCCTTCCAATGTGTTCTGTGCGTATTTaGGTGATCACATTCACATTG +
Preference number: 3 (lower is better)
Translates to: NIALNFCVLIVSSFGLPMCSVRI*VITFTL
Trigger: CAATGTGAATGTGATCACCAAAATACGCACAGAACA...CATTGGAAGGCCGAAAGAGCTGACGATTAGAACACAGAAGTTTAAAGCAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CCA 90 bp TGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACCCCCAGGGAGCAGCCTaGATGGGCCCAGGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: CLLHARKVQALSPRALVDPQGAA*MGPGVP
Trigger: AGGGACTCCTGGGCCCATCCAGGCTGCTCCCTGGGG...GTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp GCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACATGCATGCACGCAAGGTaGAGGCCCTTAGCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: ACCMHARCRPLALGPWLTCMHAR*RPLALG
Trigger: CCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCA...TGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR CCA 90 bp TGGAGCCGGAGCTCCCATTCCTCCAGCTCTTTGGCAGAGAGCTCCATGGCTAGCTCTCGCTCAGGGCGCTaGGGCACAGGCCTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: WSRSSHSSSSLAESSMASSRSGR*GTGLLC
Trigger: GCACAGAAGGCCTGTGCCCCAGCGCCCTGAGCGAGA...GCTAGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAATGGGAGCTCCGGCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR CCA 90 bp GTTGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGCTCCTCCCCTTAGCCTaGAGATGGGGCCTGCAATCC +
Preference number: 4 (lower is better)
Translates to: VVACCMHARCRPLALGPWLLPLA*RWGLQS
Trigger: GGATTGCAGGCCCCATCTCCAGGCTAAGGGGAGGAG...CCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp GCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACCTGGGCAGGAAGGCTaGGAGGAGCATGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: ACCMHARCRPLALGPWLTPGQEG*EEHATF
Trigger: AAAGGTGGCATGCTCCTCCCAGCCTTCCTGCCCAGG...TGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp GTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGGGCCACAGTGAGCAGTaGCCTTGGCTGTATTCCCCA +
Preference number: 4 (lower is better)
Translates to: VACCMHARCRPLALGPWLGHSEQ*PWLYSP
Trigger: TGGGGAATACAGCCAAGGGCACTGCTCACTGTGGCC...CAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp CAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGGAGGAGGCCGTAACCTaGTCCTCGTCGCCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: QLAHFKNKPQVPLAAPSGEEAVT*SSSPAP
Trigger: TGGGGCGGGCGACGAGGACCAGGTTACGGCCTCCTC...CCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp CATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTTGCATGCACGCAAGGTaGAGGCCCTTAGCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: HARKVQALSPRALVDTASCMHAR*RPLALG
Trigger: CCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCA...AGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR GCA 90 bp GTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGAGTGAGTCTAGGGCATaGGGGCTCTTCCTAGGTGTC +
Preference number: 4 (lower is better)
Translates to: VACCMHARCRPLALGPWLSESRA*GLFLGV
Trigger: GACACCTAGGAAGAGCCCGCATGCCCTAGACTCACT...CAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp TTCAGTGCAGCCTGTGGGAATGAATACACGGGCCACAGTGAGCAGTGCCCTTGGCGCAGGCCGAGGACATaGCGAGGAGGCCGTAACCTG +
Preference number: 4 (lower is better)
Translates to: FSAACGNEYTGHSEQCPWRRPRT*RGGRNL
Trigger: CAGGTTACGGCCTCCTCGCCATGTCCTCGGCCTGCG...CCAAGGGCACTGCTCACTGTGGCCCGTGTATTCATTCCCACAGGCTGCACTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp GTTGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGGTTCCTGGCTCCTGCTaGACTCCAGCAGACTTTGCT +
Preference number: 4 (lower is better)
Translates to: VVACCMHARCRPLALGPWVPGSC*TPADFA
Trigger: AGCAAAGTCTGCTGGAGTCCAGCAGGAGCCAGGAAC...CCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp TGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATGGAGGCTCTCCTGGATaGCCCTCTCATACTGGGCGT +
Preference number: 4 (lower is better)
Translates to: CMHARCRPLALGPWLTQHGGSPG*PSHTGR
Trigger: ACGCCCAGTATGAGAGGGCCATCCAGGAGAGCCTCC...ATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp TGCAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGGCCTGGCCTTCTGTGCTGGTaGGGAGGCTCTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: CKSLSKRLVSLRALGHRPGLLCW*GGSPGW
Trigger: CCATCCAGGAGAGCCTCCTCACCAGCACAGAAGGCC...AGGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR GCA 90 bp GTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGATGATGGGAATGACCTaGTCCACCAGAGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VACCMHARCRPLALGPWLMMGMT*STRERG
Trigger: TCCCCTCTCTCTGGTGGAGCAGGTCATTCCCATCAT...CAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR GCA 90 bp CTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCAAGAAGGGGCAGTTGTTaGCTGCTGCATGCACGCAAG +
Preference number: 4 (lower is better)
Translates to: LHARKVQALSPRALVDTARRGSC*LLHARK
Trigger: CTTGCGTGCATGCAGCAGGCAACAACTGCCCCTTCT...TGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp CTGCAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGGCCGGAGGCTCTCCTGGATaGCCCTCTCATACTGGGCGT +
Preference number: 4 (lower is better)
Translates to: LQVIIKTACLAQGAGAQAGGSPG*PSHTGR
Trigger: ACGCCCAGTATGAGAGGGCCATCCAGGAGAGCCTCC...GGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR CCA 90 bp CTGCAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGGCCTCAGCCTCTTCCTCCTaGAGCCGGAGCTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: LQVIIKTACLAQGAGAQASASSS*SRSSHS
Trigger: GGAATGGGAGCTCCGGCTCCAGGAGGAAGAGGCTGA...GGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR TCA 90 bp GAGGACCACAGAGGTGTCAGAACAGCCCAACACTGGCTTGCTTTTAGTTGCCATCGTTCCCGCCCGCGCTaGCAGCTCGCGGACAGACTT +
Preference number: 4 (lower is better)
Translates to: EDHRGVRTAQHWLAFSCHRSRPR*QLADRL
Trigger: AAGTCTGTCCGCGAGCTGTCAGCGCGGGCGGGAACG...ATGGCAACTAAAAGCAAGCCAGTGTTGGGCTGTTCTGACACCTCTGTGGTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp TGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGGCTGTGGGGTTGTTTaGAGTAGCACATTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: CCLLHARKVQALSPRALVGCGVV*SSTFRG
Trigger: ACCACGGAATGTGCTACTGCAAACAACCCCACAGCC...AACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp TCCTGGAGCCGGAGCTCCCATTCCTCCAGCTCTTTGGCAGAGAGCTCCATGGCTACAGCCCACAGCCTCTaGTTTGTGCAGAGGCTCACA +
Preference number: 4 (lower is better)
Translates to: SWSRSSHSSSSLAESSMATAHSL*FVQRLT
Trigger: TGTGAGCCTCTGCACAAAGCAGAGGCTGTGGGCTGT...AGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAATGGGAGCTCCGGCTCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR CCA 90 bp TGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTAGGCGCTCCATTTCTTaGGAAAGGTCGAAGCGTTCG +
Preference number: 4 (lower is better)
Translates to: CCLLHARKVQALSPRALVRRSIS*ERSKRS
Trigger: CGAACGCTTCGACCTTTCCCAAGAAATGGAGCGCCT...AACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp CTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCAAGCTGTAAGACTTGCTaGAGCTCAGCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LHARKVQALSPRALVDTASCKTC*SSASSS
Trigger: GGAGGAAGAGGCTGAGCTCCAGCAAGTCTTACAGCT...TGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp ATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGAGGGCACCCAGCTGGTaGATTCCCATTTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: MHARCRPLALGPWLTQHLRAPSW*IPISSA
Trigger: TGCAGATGAAATGGGAATTCACCAGCTGGGTGCCCT...CAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp ATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGCGAAGCGTTCGGTGGTaGCCACTTTGTCATCATGGT +
Preference number: 4 (lower is better)
Translates to: MHARCRPLALGPWLTQHLRSVRW*PLCHHG
Trigger: ACCATGATGACAAAGTGGTCACCACCGAACGCTTCG...CAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp AAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTGACAGCCACAGCCTCTGCTTTGTaGAGAGGCTCACAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: KVQALSPRALVDTASVTATASAL*RGSQAE
Trigger: TTCAGCCTGTGAGCCTCTGCACAAAGCAGAGGCTGT...GGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000547419.6
ENST00000551491.1
CDS-3UTR GCA 90 bp TCCTGGAGCCGGAGCTCCCATTCCTCCAGCTCTTTGGCAGAGAGCTCCATGGCTACAGCCTCTGCTTTGTaGAGAGGCTCACAGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SWSRSSHSSSSLAESSMATASAL*RGSQAE
Trigger: TTCAGCCTGTGAGCCTCTGCACAAAGCAGAGGCTGT...AGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAATGGGAGCTCCGGCTCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR CCA 90 bp GCAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGGCCTTGTGAGGAGGCTCTCCTaGATGGCCCTCTCATACTGG +
Preference number: 4 (lower is better)
Translates to: ASHYQNGLSRSGRWGTGLVRRLS*MALSYW
Trigger: CCAGTATGAGAGGGCCATCCAGGAGAGCCTCCTCAC...AAGGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551491.1
3UTR CAA 72 bp TCCCTGGTTCTGCACCTCTGCATAAAGAAGGGGCAGTaGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: SLVLHLCIKKGQ*LPAACTQGAGP
Trigger: AGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAACTGCCCCTTCTTTATGCAGAGGTGCAGAACCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CAA 72 bp GCTCCATGGCTAGCTGCAAGTCATTATCAAAACGGCTaGTCTCGCTCAGGGCGCTGGGGCACAGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: APWLAASHYQNG*SRSGRWGTGLL
Trigger: CAGAAGGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAGCTAGCCATGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR TCA 90 bp GTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGCAACCTCAAAGTTTGTaGTGTGGGAAGCTGAATCAG +
Preference number: 4 (lower is better)
Translates to: VACCMHARCRPLALGPWLQPQSL*CGKLNQ
Trigger: CTGATTCAGCTTCCCACATCACAAACTTTGAGGTTG...CAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR TCA 90 bp TGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCAGAGGCTCACAGGCTaGAAGGTCTATTTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: CMHARCRPLALGPWLTQHQRLTG*KVYLSV
Trigger: CACTGACAAATAGACCTTTCAGCCTGTGAGCCTCTG...ATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR TCA 90 bp AAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTGACAGCCCAGAGGCTCACAGGCTaGAAGGTCTATTTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: KVQALSPRALVDTASVTAQRLTG*KVYLSV
Trigger: CACTGACAAATAGACCTTTCAGCCTGTGAGCCTCTG...GGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000547419.6
ENST00000551491.1
CDS-3UTR TCA 90 bp AAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTGACAGCCATTGATGCAGAGCTTTaGTGTTGGCTGGGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: KVQALSPRALVDTASVTAIDAEL*CWLGFP
Trigger: AGGGAAGCCCAGCCAACATCAAAGCTCTGCATCAAT...GGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp AAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTGACAGCCTATCGACGCGCAGTTTaGCACCACTTTTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: KVQALSPRALVDTASVTAYRRAV*HHFSRC
Trigger: GCATCTGGAAAAGTGGTGCCAAACTGCGCGTCGATA...GGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp GTGAGCAGTGCCCTTGGCTGTATTCCCCAGGGTTCTGTATGTTGTGCGATGGTTTCAGCCTCTTCCTCCTaGAGCCGGAGCTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: VSSALGCIPQGSVCCAMVSASSS*SRSSHS
Trigger: GGAATGGGAGCTCCGGCTCCAGGAGGAAGAGGCTGA...AACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTGCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp TGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTTTGAATGAAGAGCCATaGAGCTCCGTGGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: CCLLHARKVQALSPRALVLNEEP*SSVVFS
Trigger: GCTGAAAACCACGGAGCTCCATGGCTCTTCATTCAA...AACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CAA 72 bp TCCTCCTGGAGCCGGAGCTCCCATTCCTCCAGCTCTTaGGCAGAGAGCTCCATGGCTAGCTGCAAGTCATTA +
Preference number: 4 (lower is better)
Translates to: SSWSRSSHSSSS*AESSMASCKSL
Trigger: TAATGACTTGCAGCTAGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAATGGGAGCTCCGGCTCCAGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR TCA 90 bp CATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTCTCAGTCTTGCAAAATaGGCACTCGTTCGAGCCATT +
Preference number: 4 (lower is better)
Translates to: HARKVQALSPRALVDTASLSLAK*ALVRAI
Trigger: AATGGCTCGAACGAGTGCTCATTTTGCAAGACTGAG...AGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR TCA 90 bp TGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTCAGTCTTGCAAAATaGGCACTCGTTCGAGCCATT +
Preference number: 4 (lower is better)
Translates to: CMHARCRPLALGPWLTQHLSLAK*ALVRAI
Trigger: AATGGCTCGAACGAGTGCTCATTTTGCAAGACTGAG...ATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR TCA 90 bp TGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACGCAACACTAACTGTATaGTACAGACGTTACCTGGAA +
Preference number: 4 (lower is better)
Translates to: CLLHARKVQALSPRALVDATLTV*YRRYLE
Trigger: TTCCAGGTAACGTCTGTATCATACAGTTAGTGTTGC...GTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp ATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTATGAGTCACTTTTGTaGGCCAATGACACGGCCTCA +
Preference number: 4 (lower is better)
Translates to: MHARCRPLALGPWLTQHLYESLL*ANDTAS
Trigger: TGAGGCCGTGTCATTGGCTCACAAAAGTGACTCATA...CAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp CATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTAACACTGCAACAGGTTaGCACAATGCTCAGTCCCTT +
Preference number: 4 (lower is better)
Translates to: HARKVQALSPRALVDTASNTATG*HNAQSL
Trigger: AAGGGACTGAGCATTGTGTCAACCTGTTGCAGTGTT...AGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp ATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTCTCAGGATCGCCAGTaGTCACAGCCTCATGTAAAA +
Preference number: 4 (lower is better)
Translates to: MHARCRPLALGPWLTQHLSQDRQ*SQPHVK
Trigger: TTTTACATGAGGCTGTGAGCACTGGCGATCCTGAGA...CAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp TTCAGTGCAGCCTGTGGGAATGAATACACGGGCCACAGTGAGCAGTGCCCTTGGGGTGAGGTCCCCTTGTaGACCAAATTGGTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: FSAACGNEYTGHSEQCPWGEVPL*TKLVFH
Trigger: GTGGAACACCAATTTGGTGCACAAGGGGACCTCACC...CCAAGGGCACTGCTCACTGTGGCCCGTGTATTCATTCCCACAGGCTGCACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp GCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACAGAAATCTCTCAGTCTTaGAAAATGAGCACTCGTTCG +
Preference number: 4 (lower is better)
Translates to: ACCMHARCRPLALGPWLTEISQS*KMSTRS
Trigger: CGAACGAGTGCTCATTTTGCAAGACTGAGAGATTTC...TGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR GCA 90 bp GTTGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGGAAATCTCTCAGTCTTaGAAAATGAGCACTCGTTCG +
Preference number: 4 (lower is better)
Translates to: VVACCMHARCRPLALGPWEISQS*KMSTRS
Trigger: CGAACGAGTGCTCATTTTGCAAGACTGAGAGATTTC...CCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR GCA 90 bp TGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATATGACACGGCCTCACTaGAGCCATTCCAAGAAGTAT +
Preference number: 4 (lower is better)
Translates to: CMHARCRPLALGPWLTQHMTRPH*SHSKKY
Trigger: ATACTTCTTGGAATGGCTGCAGTGAGGCCGTGTCAT...ATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp CTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCAAAGTTTGTGATGTaGGAAGCTGAATCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: LHARKVQALSPRALVDTASKFVM*EAESAW
Trigger: CCAGGCTGATTCAGCTTCCCACATCACAAACTTTGA...TGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR CCA 90 bp CTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCAGCAGACTTTGCTGGATaGCAAACTGCATTATCTCGT +
Preference number: 4 (lower is better)
Translates to: LHARKVQALSPRALVDTAADFAG*QTALSR
Trigger: ACGAGATAATGCAGTTTGCCATCCAGCAAAGTCTGC...TGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp GCTAGCTGCAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGCTGTAAGACTTGCTaGAGCTCAGCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASCKSLSKRLVSLRALGHSCKTC*SSASSS
Trigger: GGAGGAAGAGGCTGAGCTCCAGCAAGTCTTACAGCT...GTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAGCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR CCA 90 bp GTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGGCCTTTGATTTAGCCTaGAGAATCCTGCTCTCAAAA +
Preference number: 4 (lower is better)
Translates to: VACCMHARCRPLALGPWLAFDLA*RILLSK
Trigger: TTTTGAGAGCAGGATTCTCCAGGCTAAATCAAAGGC...CAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp AAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTGACAGCCGGTGTAGAACACACCTaGTTTGGTTCTGTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: KVQALSPRALVDTASVTAGVEHT*FGSVCS
Trigger: GGAACACACAGAACCAAACCAGGTGTGTTCTACACC...GGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp CAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGCAAATCCCAGCAATGTaGTATCGACGCGCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: QLAHFKNKPQVPLAAPSGQIPAM*YRRAVW
Trigger: CCAAACTGCGCGTCGATATCACATTGCTGGGATTTG...CCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp GCTGTGGGGTTGTTTGCAGTAGCACATTCCGTGGTGAGGTCCCCTTGTGCACCACAAATCCCAGCAATGTaGTATCGACGCGCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: AVGLFAVAHSVVRSPCAPQIPAM*YRRAVW
Trigger: CCAAACTGCGCGTCGATATCACATTGCTGGGATTTG...TGGTGCACAAGGGGACCTCACCACGGAATGTGCTACTGCAAACAACCCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR TCA 90 bp ATGGCTGTGGGGTTGTTTGCAGTAGCACATTCCGTGGTGAGGTCCCCTTGTGCACGAAGCGTTCGGTGGTaGCCACTTTGTCATCATGGT +
Preference number: 4 (lower is better)
Translates to: MAVGLFAVAHSVVRSPCARSVRW*PLCHHG
Trigger: ACCATGATGACAAAGTGGTCACCACCGAACGCTTCG...TGCACAAGGGGACCTCACCACGGAATGTGCTACTGCAAACAACCCCACAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR TCA 90 bp CATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTCCCTTCCACATTTTaGGATACAGATTCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: HARKVQALSPRALVDTASVPSTF*DTDSSA
Trigger: TGCCGAAGAATCTGTATCTCAAAATGTGGAAGGGAC...AGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR TCA 90 bp GTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGGCCTTCTGTCAGAGGCTCACAGGCTaGAAGGTCTATTTGTCAGTG +
Preference number: 4 (lower is better)
Translates to: VIIKTACLAQGAGAQAFCQRLTG*KVYLSV
Trigger: CACTGACAAATAGACCTTTCAGCCTGTGAGCCTCTG...ACAGAAGGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR TCA 90 bp TGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTTCGATGCGTGCAGTaGGGTGATGTGAAACTATTA +
Preference number: 4 (lower is better)
Translates to: CMHARCRPLALGPWLTQHLRCVQ*GDVKLL
Trigger: TAATAGTTTCACATCACCTCACTGCACGCATCGAAG...ATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp CCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCATACACGGGCCACAGTaGGCAGTGCCCTTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PIFWPACPLQEQASGSPSIHGPQ*AVPLAV
Trigger: TACAGCCAAGGGCACTGCTCACTGTGGCCCGTGTAT...GCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp ATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGCAGTCCCTTTTTAAGTaGATTCCTGGGGAGAAAGTC +
Preference number: 4 (lower is better)
Translates to: MHARCRPLALGPWLTQHLQSLFK*IPGEKV
Trigger: GACTTTCTCCCCAGGAATTCACTTAAAAAGGGACTG...CAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp CATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTCTTTTAGTTGCCATTTaGAACAAGCAGCATGGGGCT +
Preference number: 4 (lower is better)
Translates to: HARKVQALSPRALVDTASLLVAI*NKQHGA
Trigger: AGCCCCATGCTGCTTGTTTCAAATGGCAACTAAAAG...AGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp CCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCTCCACATTCTGGCCCTaGAGCTCCTTCTCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: PIFWPACPLQEQASGSPSSTFWP*SSFSSC
Trigger: GCAGCTCGAGAAGGAGCTGCAGGGCCAGAATGTGGA...GCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp CATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGAAATCCTTCACTCATaGAGGTGTAGAACACACCTG +
Preference number: 4 (lower is better)
Translates to: HARKVQALSPRALVDTASEILHS*RCRTHL
Trigger: CAGGTGTGTTCTACACCTGCATGAGTGAAGGATTTC...AGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp GTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGGGGTTCTGTATGTTGTaGGATGGTTATATACAAGAG +
Preference number: 4 (lower is better)
Translates to: VACCMHARCRPLALGPWLGFCML*DGYIQE
Trigger: CTCTTGTATATAACCATCGCACAACATACAGAACCC...CAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp TGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACAGCTGTAAGATTTaGTGGATGGCAAACTGCATT +
Preference number: 4 (lower is better)
Translates to: CCLLHARKVQALSPRALVDSCKI*WMANCI
Trigger: AATGCAGTTTGCCATCCAGCAAATCTTACAGCTGTC...AACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547419.6
CDS-3UTR CCA 90 bp ATGGCTGTGGGGTTGTTTGCAGTAGCACATTCCGTGGTGAGGTCCCCTTGTGCACTCCCTCAAGGGCCATaGATGTGTTGTGGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: MAVGLFAVAHSVVRSPCALPQGP*MCCGSL
Trigger: GAGACTACCACAACACATCCATGGCCCTTGAGGGAG...TGCACAAGGGGACCTCACCACGGAATGTGCTACTGCAAACAACCCCACAGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CCA 90 bp GTTGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGGACAGGAAATCCAGGTaGGAATTCCAATTTGATGAA +
Preference number: 4 (lower is better)
Translates to: VVACCMHARCRPLALGPWDRKSR*EFQFDE
Trigger: TTCATCAAATTGGAATTCCCACCTGGATTTCCTGTC...CCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR CCA 90 bp CCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCGGTCCTGAAAGTTCCTaGCTCCTGCTGGACTCCAGC +
Preference number: 4 (lower is better)
Translates to: PIFWPACPLQEQASGSPSGPESS*LLLDSS
Trigger: GCTGGAGTCCAGCAGGAGCCAGGAACTTTCAGGACC...GCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp TTCTGTGTGTTCCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGTCTCGCTCAGGGCGCTaGGGCACAGGCCTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: FCVFQYFGQLAHFKNKPQSRSGR*GTGLLC
Trigger: GCACAGAAGGCCTGTGCCCCAGCGCCCTGAGCGAGA...CTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGGAACACACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp TGCAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGGCCTATTCCTCCAGCTCTTTaGCAGAGAGCTCCATGGCTA +
Preference number: 4 (lower is better)
Translates to: CKSLSKRLVSLRALGHRPIPPAL*QRAPWL
Trigger: TAGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAAT...AGGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR CCA 90 bp TGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTTCCTCTAACTTTAGCTaGGTGTGGAAGGAATGGAAT +
Preference number: 4 (lower is better)
Translates to: CCLLHARKVQALSPRALVSSNFS*VWKEWN
Trigger: ATTCCATTCCTTCCACACCCAGCTAAAGTTAGAGGA...AACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp CAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGAGCTTTGATGTTGGCTaGGCTTCCCTTACCCCACAA +
Preference number: 4 (lower is better)
Translates to: QLAHFKNKPQVPLAAPSGSFDVG*ASLTPQ
Trigger: TTGTGGGGTAAGGGAAGCCCAGCCAACATCAAAGCT...CCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CAA 72 bp AGCACATTCCGTGGTGAGGTCCCCTTGTGCACCAAATaGGTGTTCCACAGTTCCCAGCAAAGATTCCAGCGG +
Preference number: 4 (lower is better)
Translates to: STFRGEVPLCTK*VFHSSQQRFQR
Trigger: CCGCTGGAATCTTTGCTGGGAACTGTGGAACACCAATTTGGTGCACAAGGGGACCTCACCACGGAATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR TCA 90 bp TGCAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGGCCTCTCAGTCTTGCAAAATaGGCACTCGTTCGAGCCATT +
Preference number: 4 (lower is better)
Translates to: CKSLSKRLVSLRALGHRPLSLAK*ALVRAI
Trigger: AATGGCTCGAACGAGTGCTCATTTTGCAAGACTGAG...AGGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR TCA 90 bp TGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTATGCGTGCAGTGAGGTaGTGTGAAACTATTAGTAAT +
Preference number: 4 (lower is better)
Translates to: CCLLHARKVQALSPRALVMRAVR*CETISN
Trigger: ATTACTAATAGTTTCACATCACCTCACTGCACGCAT...AACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp TGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTCACAGAAATTACCTATaGGTCACTTTTGTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: CCLLHARKVQALSPRALVHRNYL*VTFVSQ
Trigger: TTGGCTCACAAAAGTGACTCATAGGTAATTTCTGTG...AACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp ATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGGCCTTCTGTGCTATTCGAAGCTGGTCCTaGAAGTTCCTGAATCAGCCT +
Preference number: 4 (lower is better)
Translates to: IIKTACLAQGAGAQAFCAIRSWS*KFLNQP
Trigger: AGGCTGATTCAGGAACTTTCAGGACCAGCTTCGAAT...AGCACAGAAGGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR GCA 90 bp GTTGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGAGTAAAAATGTGACCTaGAAGCCAATACAGCTAATG +
Preference number: 4 (lower is better)
Translates to: VVACCMHARCRPLALGPWSKNVT*KPIQLM
Trigger: CATTAGCTGTATTGGCTTGCAGGTCACATTTTTACT...CCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp CATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTTATACTGGCCTCATGTaGAGAAGGAATTTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: HARKVQALSPRALVDTASYTGLM*RRNFGQ
Trigger: CTGACCAAAATTCCTTCTGCACATGAGGCCAGTATA...AGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp ATGGCTGTGGGGTTGTTTGCAGTAGCACATTCCGTGGTGAGGTCCCCTTGTGCATATCGACGCGCAGTTTaGCACCACTTTTCCAGATGC +
Preference number: 4 (lower is better)
Translates to: MAVGLFAVAHSVVRSPCAYRRAV*HHFSRC
Trigger: GCATCTGGAAAAGTGGTGCCAAACTGCGCGTCGATA...TGCACAAGGGGACCTCACCACGGAATGTGCTACTGCAAACAACCCCACAGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CCA 90 bp TGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATAACTTCCCTGCTTTTTaGCTTCATCAAGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: CMHARCRPLALGPWLTQHNFPAF*LHQVQS
Trigger: ACTCTGGACTTGATGAAGCCAAAAAGCAGGGAAGTT...ATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp TCCCTTTTGAATGAAGAGCCATGGAGCTCCGTGGTTTTCAGCTCCCTTTCTGGTGTGAGGAGGCTCTCCTaGATGGCCCTCTCATACTGG +
Preference number: 4 (lower is better)
Translates to: SLLNEEPWSSVVFSSLSGVRRLS*MALSYW
Trigger: CCAGTATGAGAGGGCCATCCAGGAGAGCCTCCTCAC...ACCAGAAAGGGAGCTGAAAACCACGGAGCTCCATGGCTCTTCATTCAAAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp GTGGAAATCCTTCACTCATGCAGGTGTAGAACACACCTGGTTTGGTTCTGTGTGCCCTTAGCCTGGAGATaGGGCCTGCAATCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: VEILHSCRCRTHLVWFCVPLAWR*GLQSLV
Trigger: GACCAGGGATTGCAGGCCCCATCTCCAGGCTAAGGG...CACACAGAACCAAACCAGGTGTGTTCTACACCTGCATGAGTGAAGGATTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp GTTGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGCTAAGGCAACATCCATaGCCATTTGTGTATCTTAAT +
Preference number: 4 (lower is better)
Translates to: VVACCMHARCRPLALGPWLRQHP*PFVYLN
Trigger: ATTAAGATACACAAATGGCCATGGATGTTGCCTTAG...CCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp TGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATTGTGTTCCAATATTTTaGCCAGCTTGCCCACTTCAA +
Preference number: 4 (lower is better)
Translates to: CMHARCRPLALGPWLTQHCVPIF*PACPLQ
Trigger: TTGAAGTGGGCAAGCTGGCCAAAATATTGGAACACA...ATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp GCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACAGATACAGACGTTACCTaGAACAGTAGTTATGTTTCT +
Preference number: 4 (lower is better)
Translates to: ACCMHARCRPLALGPWLTDTDVT*NSSYVS
Trigger: AGAAACATAACTACTGTTCCAGGTAACGTCTGTATC...TGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp CAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGTTGAAACAAGCAGCATaGGGCTTGTTAACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QLAHFKNKPQVPLAAPSGLKQAA*GLLTWA
Trigger: TGCCCAGGTTAACAAGCCCCATGCTGCTTGTTTCAA...CCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp CTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCACTGTGCGTATTTTGGTaGTCACATTCACATTGTTTA +
Preference number: 4 (lower is better)
Translates to: LHARKVQALSPRALVDTALCVFW*SHSHCL
Trigger: TAAACAATGTGAATGTGATCACCAAAATACGCACAG...TGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp ATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGGCCTTCTGTGCTGTCCCTTCCACATTTTaGGATACAGATTCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: IIKTACLAQGAGAQAFCAVPSTF*DTDSSA
Trigger: TGCCGAAGAATCTGTATCTCAAAATGTGGAAGGGAC...AGCACAGAAGGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR TCA 90 bp GCTGCAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGGCAGGTCTATTTGTCAGTaGGTGACAGCTGTAAGACTT +
Preference number: 4 (lower is better)
Translates to: AASHYQNGLSRSGRWGTGRSICQ*VTAVRL
Trigger: AAGTCTTACAGCTGTCACTCACTGACAAATAGACCT...GCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR GCA 90 bp GCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACATACTGTGTAAACCTTTaGTTCGTAACCATTAACAAC +
Preference number: 4 (lower is better)
Translates to: ACCMHARCRPLALGPWLTYCVNL*FVTINN
Trigger: GTTGTTAATGGTTACGAAGCAAAGGTTTACACAGTA...TGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp CTTGTGCACCAAATTGGTGTTCCACAGTTCCCAGCAAAGATTCCAGCGGGTTCCGGCTGTGGGGTTGTTTaGAGTAGCACATTCCGTGGT +
Preference number: 4 (lower is better)
Translates to: LVHQIGVPQFPAKIPAGSGCGVV*SSTFRG
Trigger: ACCACGGAATGTGCTACTGCAAACAACCCCACAGCC...GGAACCCGCTGGAATCTTTGCTGGGAACTGTGGAACACCAATTTGGTGCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR GCA 90 bp GTTGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGACACATCCACAACATTaGTTTAAACTTCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: VVACCMHARCRPLALGPWTHPQH*FKLLCS
Trigger: AGAACACAGAAGTTTAAAGCAATGTTGTGGATGTGT...CCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR GCA 90 bp TGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTTCTTCATCTTGCAAATaGACATTTCTGCCATTGTCT +
Preference number: 4 (lower is better)
Translates to: CCLLHARKVQALSPRALVSSSCK*TFLPLS
Trigger: AGACAATGGCAGAAATGTGCATTTGCAAGATGAAGA...AACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR GCA 90 bp ATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGGCCTTCTGTGCTAGCTCCATGGCTAGCTaGAAGTCATTATCAAAACGG +
Preference number: 4 (lower is better)
Translates to: IIKTACLAQGAGAQAFCASSMAS*KSLSKR
Trigger: CCGTTTTGATAATGACTTGCAGCTAGCCATGGAGCT...AGCACAGAAGGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR GCA 90 bp GGGAATGACCTGCTCCACCAGAGAGAGGGGAAACTCTTCACACATCCACAACATCACCGAGAAACTCAGTaGAGCCCACAGAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: GNDLLHQREGKLFTHPQHHRETQ*SPQNRA
Trigger: AGCTCTGTTCTGTGGGCTGCACTGAGTTTCTCGGTG...ATGTTGTGGATGTGTGAAGAGTTTCCCCTCTCTCTGGTGGAGCAGGTCATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CCA 90 bp CAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGTCAAAGTTTGTGATGTaGGAAGCTGAATCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: QLAHFKNKPQVPLAAPSGSKFVM*EAESAW
Trigger: CCAGGCTGATTCAGCTTCCCACATCACAAACTTTGA...CCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp CAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGTCCAGCAGACTTTGCTaGATGGCAAACTGCATTATC +
Preference number: 4 (lower is better)
Translates to: QLAHFKNKPQVPLAAPSGSSRLC*MANCII
Trigger: GATAATGCAGTTTGCCATCCAGCAAAGTCTGCTGGA...CCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp AAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTGACAGCCAGCTGTAAGATTTGCTaGATGGCAAACTGCATTATC +
Preference number: 4 (lower is better)
Translates to: KVQALSPRALVDTASVTASCKIC*MANCII
Trigger: GATAATGCAGTTTGCCATCCAGCAAATCTTACAGCT...GGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547419.6
CDS-3UTR TCA 90 bp TCCCTTTTGAATGAAGAGCCATGGAGCTCCGTGGTTTTCAGCTCCCTTTCTGGTTCATCAAGTCCAGAGTaGGGCGCTCCATTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLLNEEPWSSVVFSSLSGSSSPE*GAPFLG
Trigger: CCCAAGAAATGGAGCGCCTCACTCTGGACTTGATGA...ACCAGAAAGGGAGCTGAAAACCACGGAGCTCCATGGCTCTTCATTCAAAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp TCCCCAGGGTTCTGTATGTTGTGCGATGGTTATATACAAGAGGGTTTGACAAAAGGCCTTCTGTGCTGGTaGGGAGGCTCTCCTGGATGG +
Preference number: 4 (lower is better)
Translates to: SPGFCMLCDGYIQEGLTKGLLCW*GGSPGW
Trigger: CCATCCAGGAGAGCCTCCTCACCAGCACAGAAGGCC...TTTTGTCAAACCCTCTTGTATATAACCATCGCACAACATACAGAACCCTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp GCTAGCTGCAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACGAAATCTCTCAGTCTTaGAAAATGAGCACTCGTTCG +
Preference number: 4 (lower is better)
Translates to: ASCKSLSKRLVSLRALGHEISQS*KMSTRS
Trigger: CGAACGAGTGCTCATTTTGCAAGACTGAGAGATTTC...GTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAGCTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR GCA 90 bp TATTTGTCAGTGAGTGACAGCTGTAAGACTTGCTGGAGCTCAGCCTCTTCCTCCGACAGCTGTAAGACTTaGTGGAGCTCAGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: YLSVSDSCKTCWSSASSSDSCKT*WSSASS
Trigger: GGAAGAGGCTGAGCTCCAGCAAGTCTTACAGCTGTC...GGAGGAAGAGGCTGAGCTCCAGCAAGTCTTACAGCTGTCACTCACTGACAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR CCA 90 bp TGTGACGTTGCCTATACTGGCCTCATGTGCAGAAGGAATTTTGGTCAGACAATGACAGCCTCCACATTCTaGCCCTGCAGCTCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: CDVAYTGLMCRRNFGQTMTASTF*PCSSFS
Trigger: CGAGAAGGAGCTGCAGGGCCAGAATGTGGAGGCTGT...CATTGTCTGACCAAAATTCCTTCTGCACATGAGGCCAGTATAGGCAACGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp GTGGTGAGGTCCCCTTGTGCACCAAATTGGTGTTCCACAGTTCCCAGCAAAGATCCTTGTGCACCAAATTaGTGTTCCACAGTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: VVRSPCAPNWCSTVPSKDPCAPN*CSTVPS
Trigger: GCTGGGAACTGTGGAACACCAATTTGGTGCACAAGG...ATCTTTGCTGGGAACTGTGGAACACCAATTTGGTGCACAAGGGGACCTCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR GCA 90 bp TGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATACACATCCACAACATTaGTTTAAACTTCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: CMHARCRPLALGPWLTQHTHPQH*FKLLCS
Trigger: AGAACACAGAAGTTTAAAGCAATGTTGTGGATGTGT...ATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR GCA 90 bp GTGGAAATCCTTCACTCATGCAGGTGTAGAACACACCTGGTTTGGTTCTGTGTGATGATGGGAATGACCTaGTCCACCAGAGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VEILHSCRCRTHLVWFCVMMGMT*STRERG
Trigger: TCCCCTCTCTCTGGTGGAGCAGGTCATTCCCATCAT...CACACAGAACCAAACCAGGTGTGTTCTACACCTGCATGAGTGAAGGATTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp GCACATTCCGTGGTGAGGTCCCCTTGTGCACCAAATTGGTGTTCCACAGTTCCCGAAATCTCTCAGTCTTaGAAAATGAGCACTCGTTCG +
Preference number: 4 (lower is better)
Translates to: AHSVVRSPCAPNWCSTVPEISQS*KMSTRS
Trigger: CGAACGAGTGCTCATTTTGCAAGACTGAGAGATTTC...GGGAACTGTGGAACACCAATTTGGTGCACAAGGGGACCTCACCACGGAATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR GCA 90 bp TTCTGTGTGTTCCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGACAGCCCACAGCCTCTaGTTTGTGCAGAGGCTCACA +
Preference number: 4 (lower is better)
Translates to: FCVFQYFGQLAHFKNKPQTAHSL*FVQRLT
Trigger: TGTGAGCCTCTGCACAAAGCAGAGGCTGTGGGCTGT...CTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGGAACACACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp CAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGTGGCTTGCTTTTAGTTaGCATTTGAAACAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QLAHFKNKPQVPLAAPSGWLAFS*HLKQAA
Trigger: TGCTGCTTGTTTCAAATGGCAACTAAAAGCAAGCCA...CCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp TGGCAGAGAGCTCCATGGCTAGCTGCAAGTCATTATCAAAACGGCTTGTCTCGCTGGCAGAGAGCTCCATaGCTAGCTGCAAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: WQRAPWLAASHYQNGLSRWQRAP*LAASHY
Trigger: ATAATGACTTGCAGCTAGCCATGGAGCTCTCTGCCA...GCGAGACAAGCCGTTTTGATAATGACTTGCAGCTAGCCATGGAGCTCTCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR CCA 90 bp CTTCAAGGGATAGCATTGATGCAGAGCTTTGATGTTGGCTGGGCTTCCCTTACCATTCCTCCAGCTCTTTaGCAGAGAGCTCCATGGCTA +
Preference number: 4 (lower is better)
Translates to: LQGIALMQSFDVGWASLTIPPAL*QRAPWL
Trigger: TAGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAAT...GGTAAGGGAAGCCCAGCCAACATCAAAGCTCTGCATCAATGCTATCCCTTGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp GTGGAAATCCTTCACTCATGCAGGTGTAGAACACACCTGGTTTGGTTCTGTGTGAGCCATGGAGCTCCGTaGTTTTCAGCTCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: VEILHSCRCRTHLVWFCVSHGAP*FSAPFL
Trigger: CAGAAAGGGAGCTGAAAACCACGGAGCTCCATGGCT...CACACAGAACCAAACCAGGTGTGTTCTACACCTGCATGAGTGAAGGATTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp TTCTGTGTGTTCCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGAGTGAGCAGTGCCCTTaGCTGTATTCCCCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: FCVFQYFGQLAHFKNKPQSEQCP*LYSPGF
Trigger: GAACCCTGGGGAATACAGCCAAGGGCACTGCTCACT...CTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGGAACACACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp GGTATCAATCCTAAGGAGTGGCTCAATTCTTGCTCAATGCACGACAAGCACACAAGGGCACCCAGCTGGTaGATTCCCATTTCATCTGCA +
Preference number: 4 (lower is better)
Translates to: GINPKEWLNSCSMHDKHTRAPSW*IPISSA
Trigger: TGCAGATGAAATGGGAATTCACCAGCTGGGTGCCCT...TGTGTGCTTGTCGTGCATTGAGCAAGAATTGAGCCACTCCTTAGGATTGATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR TCA 90 bp CAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGTATATAAAAGCACCCTaGCTCTGCAATAACTTGTCT +
Preference number: 4 (lower is better)
Translates to: QLAHFKNKPQVPLAAPSGYIKAP*LCNNLS
Trigger: AGACAAGTTATTGCAGAGTCAGGGTGCTTTTATATA...CCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp CTTCAAGGGATAGCATTGATGCAGAGCTTTGATGTTGGCTGGGCTTCCCTTACCGACTCCAGCAGACTTTaGTGGATGGCAAACTGCATT +
Preference number: 4 (lower is better)
Translates to: LQGIALMQSFDVGWASLTDSSRL*WMANCI
Trigger: AATGCAGTTTGCCATCCAGCAAAGTCTGCTGGAGTC...GGTAAGGGAAGCCCAGCCAACATCAAAGCTCTGCATCAATGCTATCCCTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp TTCTGTGTGTTCCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGTCAGGTTCCCCTAGCTaGTCCTTCAGGGACAGGATT +
Preference number: 4 (lower is better)
Translates to: FCVFQYFGQLAHFKNKPQSGSPS*SFRDRI
Trigger: AATCCTGTCCCTGAAGGAGCAGCTAGGGGAACCTGA...CTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGGAACACACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp GTGGGGTTGTTTGCAGTAGCACATTCCGTGGTGAGGTCCCCTTGTGCACCAAATAACTTCCCTGCTTTTTaGCTTCATCAAGTCCAGAGT +
Preference number: 4 (lower is better)
Translates to: VGLFAVAHSVVRSPCAPNNFPAF*LHQVQS
Trigger: ACTCTGGACTTGATGAAGCCAAAAAGCAGGGAAGTT...ATTTGGTGCACAAGGGGACCTCACCACGGAATGTGCTACTGCAAACAACCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CCA 90 bp CTTCAAGGGATAGCATTGATGCAGAGCTTTGATGTTGGCTGGGCTTCCCTTACCTGGCAGAGAGCTCCATaGCTAGCTGCAAGTCATTAT +
Preference number: 4 (lower is better)
Translates to: LQGIALMQSFDVGWASLTWQRAP*LAASHY
Trigger: ATAATGACTTGCAGCTAGCCATGGAGCTCTCTGCCA...GGTAAGGGAAGCCCAGCCAACATCAAAGCTCTGCATCAATGCTATCCCTTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CAA 72 bp AGAACAGCCCAACACTGGCTTGCTTTTAGTTGCCATTaGAAACAAGCAGCATGGGGCTTGTTAACCTGGGCA +
Preference number: 4 (lower is better)
Translates to: RTAQHWLAFSCH*KQAAWGLLTWA
Trigger: TGCCCAGGTTAACAAGCCCCATGCTGCTTGTTTCAAATGGCAACTAAAAGCAAGCCAGTGTTGGGCTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp GTGAGCAGTGCCCTTGGCTGTATTCCCCAGGGTTCTGTATGTTGTGCGATGGTTTACCCATTTCTTTGGTaGACAGTAAAGAAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VSSALGCIPQGSVCCAMVYPFLW*TVKKCL
Trigger: GAGACACTTCTTTACTGTTCACCAAAGAAATGGGTA...AACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTGCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp TCCCTTTTGAATGAAGAGCCATGGAGCTCCGTGGTTTTCAGCTCCCTTTCTGGTAGGATTAGCTGCCTTTaGTTTAGCCTGGAGAATCCT +
Preference number: 4 (lower is better)
Translates to: SLLNEEPWSSVVFSSLSGRISCL*FSLENP
Trigger: AGGATTCTCCAGGCTAAATCAAAGGCAGCTAATCCT...ACCAGAAAGGGAGCTGAAAACCACGGAGCTCCATGGCTCTTCATTCAAAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp CTTTTCGTAGCTGGTATCAATCCTAAGGAGTGGCTCAATTCTTGCTCAATGCACATGATGGGAATGACCTaGTCCACCAGAGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LFVAGINPKEWLNSCSMHMMGMT*STRERG
Trigger: TCCCCTCTCTCTGGTGGAGCAGGTCATTCCCATCAT...GTGCATTGAGCAAGAATTGAGCCACTCCTTAGGATTGATACCAGCTACGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CCA 90 bp TTCTGTGTGTTCCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGCCTTGTGCACCAAATTaGTGTTCCACAGTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: FCVFQYFGQLAHFKNKPQPCAPN*CSTVPS
Trigger: GCTGGGAACTGTGGAACACCAATTTGGTGCACAAGG...CTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGGAACACACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp AACATTGCTTTAAACTTCTGTGTTCTAATCGTCAGCTCTTTCGGCCTTCCAATGCCCACAGAACAGAGCTaGGGCTCATTCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: NIALNFCVLIVSSFGLPMPTEQS*GSFSWP
Trigger: TGGCCAAGAGAATGAGCCTCAGCTCTGTTCTGTGGG...CATTGGAAGGCCGAAAGAGCTGACGATTAGAACACAGAAGTTTAAAGCAATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR GCA 90 bp GTGAGCAGTGCCCTTGGCTGTATTCCCCAGGGTTCTGTATGTTGTGCGATGGTTTCTTCATCTTGCAAATaGACATTTCTGCCATTGTCT +
Preference number: 4 (lower is better)
Translates to: VSSALGCIPQGSVCCAMVSSSCK*TFLPLS
Trigger: AGACAATGGCAGAAATGTGCATTTGCAAGATGAAGA...AACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTGCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp TCCCCAGGGTTCTGTATGTTGTGCGATGGTTATATACAAGAGGGTTTGACAAAAGACAGCTGTAAGACTTaGTGGAGCTCAGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SPGFCMLCDGYIQEGLTKDSCKT*WSSASS
Trigger: GGAAGAGGCTGAGCTCCAGCAAGTCTTACAGCTGTC...TTTTGTCAAACCCTCTTGTATATAACCATCGCACAACATACAGAACCCTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp GGTATCAATCCTAAGGAGTGGCTCAATTCTTGCTCAATGCACGACAAGCACACAGAGTGGCTCAATTCTTaGTCAATGCACGACAAGCAC +
Preference number: 4 (lower is better)
Translates to: GINPKEWLNSCSMHDKHTEWLNS*SMHDKH
Trigger: GTGCTTGTCGTGCATTGAGCAAGAATTGAGCCACTC...TGTGTGCTTGTCGTGCATTGAGCAAGAATTGAGCCACTCCTTAGGATTGATACC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CCA 90 bp TCCCCAGGGTTCTGTATGTTGTGCGATGGTTATATACAAGAGGGTTTGACAAAACTCCCTCAAGGGCCATaGATGTGTTGTGGTAGTCTC +
Preference number: 4 (lower is better)
Translates to: SPGFCMLCDGYIQEGLTKLPQGP*MCCGSL
Trigger: GAGACTACCACAACACATCCATGGCCCTTGAGGGAG...TTTTGTCAAACCCTCTTGTATATAACCATCGCACAACATACAGAACCCTGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp CTCTTTCGGCCTTCCAATGTCCCTGTCTTTCAGATCAAACTCTTCATTGAAGTAAGGCGCTCCATTTCTTaGGAAAGGTCGAAGCGTTCG +
Preference number: 4 (lower is better)
Translates to: LFRPSNVPVFQIKLFIEVRRSIS*ERSKRS
Trigger: CGAACGCTTCGACCTTTCCCAAGAAATGGAGCGCCT...TACTTCAATGAAGAGTTTGATCTGAAAGACAGGGACATTGGAAGGCCGAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CCA 90 bp TGGCAGAGAGCTCCATGGCTAGCTGCAAGTCATTATCAAAACGGCTTGTCTCGCGACAGGAAATCCAGGTaGGAATTCCAATTTGATGAA +
Preference number: 4 (lower is better)
Translates to: WQRAPWLAASHYQNGLSRDRKSR*EFQFDE
Trigger: TTCATCAAATTGGAATTCCCACCTGGATTTCCTGTC...GCGAGACAAGCCGTTTTGATAATGACTTGCAGCTAGCCATGGAGCTCTCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR CCA 90 bp GTGGTGAGGTCCCCTTGTGCACCAAATTGGTGTTCCACAGTTCCCAGCAAAGATGACAGGAAATCCAGGTaGGAATTCCAATTTGATGAA +
Preference number: 4 (lower is better)
Translates to: VVRSPCAPNWCSTVPSKDDRKSR*EFQFDE
Trigger: TTCATCAAATTGGAATTCCCACCTGGATTTCCTGTC...ATCTTTGCTGGGAACTGTGGAACACCAATTTGGTGCACAAGGGGACCTCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CCA 90 bp CTTCAAGGGATAGCATTGATGCAGAGCTTTGATGTTGGCTGGGCTTCCCTTACCGAAATAGACGCAAAATaGAGGAGGGTGTTGTTTACC +
Preference number: 4 (lower is better)
Translates to: LQGIALMQSFDVGWASLTEIDAK*RRVLFT
Trigger: GGTAAACAACACCCTCCTCCATTTTGCGTCTATTTC...GGTAAGGGAAGCCCAGCCAACATCAAAGCTCTGCATCAATGCTATCCCTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp CTCTTCCTAGGTGTCTACGTGGAAATCCTTCACTCATGCAGGTGTAGAACACACAGAACAGCCCAACACTaGCTTGCTTTTAGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LFLGVYVEILHSCRCRTHRTAQH*LAFSCH
Trigger: ATGGCAACTAAAAGCAAGCCAGTGTTGGGCTGTTCT...GTGTGTTCTACACCTGCATGAGTGAAGGATTTCCACGTAGACACCTAGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp GGTGAGGTCCCCTTGTGCACCAAATTGGTGTTCCACAGTTCCCAGCAAAGATTCATCAATCCTAAGGAGTaGCTCAATTCTTGCTCAATG +
Preference number: 4 (lower is better)
Translates to: GEVPLCTKLVFHSSQQRFINPKE*LNSCSM
Trigger: CATTGAGCAAGAATTGAGCCACTCCTTAGGATTGAT...GAATCTTTGCTGGGAACTGTGGAACACCAATTTGGTGCACAAGGGGACCTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR GCA 90 bp TCCCTTTTGAATGAAGAGCCATGGAGCTCCGTGGTTTTCAGCTCCCTTTCTGGTAAGGAAACAGCAAGATaGAATAATGTTCGACCTCGT +
Preference number: 4 (lower is better)
Translates to: SLLNEEPWSSVVFSSLSGKETAR*NNVRPR
Trigger: ACGAGGTCGAACATTATTGCATCTTGCTGTTTCCTT...ACCAGAAAGGGAGCTGAAAACCACGGAGCTCCATGGCTCTTCATTCAAAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp CTCTTCCTAGGTGTCTACGTGGAAATCCTTCACTCATGCAGGTGTAGAACACACACCATTAACAACTTCTaGTTTATCTGTCCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LFLGVYVEILHSCRCRTHTINNF*FICPPA
Trigger: GGCTGGAGGACAGATAAAGCAGAAGTTGTTAATGGT...GTGTGTTCTACACCTGCATGAGTGAAGGATTTCCACGTAGACACCTAGGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp TCCCCAGGGTTCTGTATGTTGTGCGATGGTTATATACAAGAGGGTTTGACAAAAAAAGTTCCTGGCTCCTaGTGGACTCCAGCAGACTTT +
Preference number: 4 (lower is better)
Translates to: SPGFCMLCDGYIQEGLTKKVPGS*WTPADF
Trigger: AAAGTCTGCTGGAGTCCAGCAGGAGCCAGGAACTTT...TTTTGTCAAACCCTCTTGTATATAACCATCGCACAACATACAGAACCCTGGGGA
46% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp TTCTGTGTGTTCCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGAGCTCCATGGCTAGCTaGAAGTCATTATCAAAACGG +
Preference number: 4 (lower is better)
Translates to: FCVFQYFGQLAHFKNKPQSSMAS*KSLSKR
Trigger: CCGTTTTGATAATGACTTGCAGCTAGCCATGGAGCT...CTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGGAACACACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp TGTGACGTTGCCTATACTGGCCTCATGTGCAGAAGGAATTTTGGTCAGACAATGATATTTTGGCCAGCTTaGCCACTTCAAGAACAAGCC +
Preference number: 4 (lower is better)
Translates to: CDVAYTGLMCRRNFGQTMIFWPA*PLQEQA
Trigger: GGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATAT...CATTGTCTGACCAAAATTCCTTCTGCACATGAGGCCAGTATAGGCAACGTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp TCCCCAGGGTTCTGTATGTTGTGCGATGGTTATATACAAGAGGGTTTGACAAAAGGAGCATGCCACCTTTaGAGTGATGAACTGAGCGAA +
Preference number: 4 (lower is better)
Translates to: SPGFCMLCDGYIQEGLTKGACHL*SDELSE
Trigger: TTCGCTCAGTTCATCACTGCAAAGGTGGCATGCTCC...TTTTGTCAAACCCTCTTGTATATAACCATCGCACAACATACAGAACCCTGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp CTTCAAGGGATAGCATTGATGCAGAGCTTTGATGTTGGCTGGGCTTCCCTTACCGCGACAGACATCATTTaGGCATATTCTAGAAACCAA +
Preference number: 4 (lower is better)
Translates to: LQGIALMQSFDVGWASLTATDII*AYSRNQ
Trigger: TTGGTTTCTAGAATATGCCCAAATGATGTCTGTCGC...GGTAAGGGAAGCCCAGCCAACATCAAAGCTCTGCATCAATGCTATCCCTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CCA 90 bp TTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGACAGGATTAGCTCTGTATGTTGTGCGATaGTTATATACAAGAGGGTTT +
Preference number: 4 (lower is better)
Translates to: FKNKPQVPLAAPSGTGLALYVVR*LYTRGF
Trigger: AAACCCTCTTGTATATAACCATCGCACAACATACAG...AGCTAATCCTGTCCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
3UTR CAA 72 bp CAGTGCCCTTGGCTGTATTCCCCAGGGTTCTGTATGTaGTGCGATGGTTATATACAAGAGGGTTTGACAAAA +
Preference number: 4 (lower is better)
Translates to: QCPWLYSPGFCM*CDGYIQEGLTK
Trigger: TTTTGTCAAACCCTCTTGTATATAACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp AACCTCACATTCAAGAGCAGCTATATTCTTTTCGTAGCTGGTATCAATCCTAAGTCATCAAGTCCAGAGTaGGGCGCTCCATTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: NLTFKSSYILFVAGINPKSSSPE*GAPFLG
Trigger: CCCAAGAAATGGAGCGCCTCACTCTGGACTTGATGA...CTTAGGATTGATACCAGCTACGAAAAGAATATAGCTGCTCTTGAATGTGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR TCA 90 bp CACATCCACAACATTGCTTTAAACTTCTGTGTTCTAATCGTCAGCTCTTTCGGCCTCAGTCTTGCAAAATaGGCACTCGTTCGAGCCATT +
Preference number: 4 (lower is better)
Translates to: HIHNIALNFCVLIVSSFGLSLAK*ALVRAI
Trigger: AATGGCTCGAACGAGTGCTCATTTTGCAAGACTGAG...GCCGAAAGAGCTGACGATTAGAACACAGAAGTTTAAAGCAATGTTGTGGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR TCA 90 bp TTCTGTGTGTTCCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGAGGTCTATTTGTCAGTaGGTGACAGCTGTAAGACTT +
Preference number: 4 (lower is better)
Translates to: FCVFQYFGQLAHFKNKPQRSICQ*VTAVRL
Trigger: AAGTCTTACAGCTGTCACTCACTGACAAATAGACCT...CTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGGAACACACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp AACCTCACATTCAAGAGCAGCTATATTCTTTTCGTAGCTGGTATCAATCCTAAGGGTGAGGTCCCCTTGTaGACCAAATTGGTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: NLTFKSSYILFVAGINPKGEVPL*TKLVFH
Trigger: GTGGAACACCAATTTGGTGCACAAGGGGACCTCACC...CTTAGGATTGATACCAGCTACGAAAAGAATATAGCTGCTCTTGAATGTGAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR GCA 90 bp CTTGTGCACCAAATTGGTGTTCCACAGTTCCCAGCAAAGATTCCAGCGGGTTCCACACATCCACAACATTaGTTTAAACTTCTGTGTTCT +
Preference number: 4 (lower is better)
Translates to: LVHQIGVPQFPAKIPAGSTHPQH*FKLLCS
Trigger: AGAACACAGAAGTTTAAAGCAATGTTGTGGATGTGT...GGAACCCGCTGGAATCTTTGCTGGGAACTGTGGAACACCAATTTGGTGCACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CCA 90 bp GTGGAAATCCTTCACTCATGCAGGTGTAGAACACACCTGGTTTGGTTCTGTGTGACAATTCTTTGTATCTaGGAACGTTTCACTGGCAAC +
Preference number: 4 (lower is better)
Translates to: VEILHSCRCRTHLVWFCVTILCI*ERFTGN
Trigger: GTTGCCAGTGAAACGTTCCCAGATACAAAGAATTGT...CACACAGAACCAAACCAGGTGTGTTCTACACCTGCATGAGTGAAGGATTTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp TCCCCAGGGTTCTGTATGTTGTGCGATGGTTATATACAAGAGGGTTTGACAAAAGTCCCTTCCACATTTTaGGATACAGATTCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: SPGFCMLCDGYIQEGLTKVPSTF*DTDSSA
Trigger: TGCCGAAGAATCTGTATCTCAAAATGTGGAAGGGAC...TTTTGTCAAACCCTCTTGTATATAACCATCGCACAACATACAGAACCCTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR TCA 90 bp TCCCCAGGGTTCTGTATGTTGTGCGATGGTTATATACAAGAGGGTTTGACAAAACAACCTCAAAGTTTGTaGTGTGGGAAGCTGAATCAG +
Preference number: 4 (lower is better)
Translates to: SPGFCMLCDGYIQEGLTKQPQSL*CGKLNQ
Trigger: CTGATTCAGCTTCCCACATCACAAACTTTGAGGTTG...TTTTGTCAAACCCTCTTGTATATAACCATCGCACAACATACAGAACCCTGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp GTAGCTGGTATCAATCCTAAGGAGTGGCTCAATTCTTGCTCAATGCACGACAAGAAGGAAACAGCAAGATaGAATAATGTTCGACCTCGT +
Preference number: 4 (lower is better)
Translates to: VAGINPKEWLNSCSMHDKKETAR*NNVRPR
Trigger: ACGAGGTCGAACATTATTGCATCTTGCTGTTTCCTT...CTTGTCGTGCATTGAGCAAGAATTGAGCCACTCCTTAGGATTGATACCAGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CCA 90 bp TGTGACGTTGCCTATACTGGCCTCATGTGCAGAAGGAATTTTGGTCAGACAATGGACAGGAAATCCAGGTaGGAATTCCAATTTGATGAA +
Preference number: 4 (lower is better)
Translates to: CDVAYTGLMCRRNFGQTMDRKSR*EFQFDE
Trigger: TTCATCAAATTGGAATTCCCACCTGGATTTCCTGTC...CATTGTCTGACCAAAATTCCTTCTGCACATGAGGCCAGTATAGGCAACGTCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp AACCTCACATTCAAGAGCAGCTATATTCTTTTCGTAGCTGGTATCAATCCTAAGTCTCAGGATCGCCAGTaGTCACAGCCTCATGTAAAA +
Preference number: 4 (lower is better)
Translates to: NLTFKSSYILFVAGINPKSQDRQ*SQPHVK
Trigger: TTTTACATGAGGCTGTGAGCACTGGCGATCCTGAGA...CTTAGGATTGATACCAGCTACGAAAAGAATATAGCTGCTCTTGAATGTGAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CCA 90 bp AGCTCTTTCGGCCTTCCAATGTCCCTGTCTTTCAGATCAAACTCTTCATTGAAGGCGACAGACATCATTTaGGCATATTCTAGAAACCAA +
Preference number: 4 (lower is better)
Translates to: SSFGLPMSLSFRSNSSLKATDII*AYSRNQ
Trigger: TTGGTTTCTAGAATATGCCCAAATGATGTCTGTCGC...CTTCAATGAAGAGTTTGATCTGAAAGACAGGGACATTGGAAGGCCGAAAGAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR TCA 90 bp AAAGCTGGTAGTAAAAATGTGACCTGCAAGCCAATACAGCTAATGGAAAGTGATGACTGGAATTTTGTATaGGCACCCTCTAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: KAGSKNVTCKPIQLMESDDWNFV*APSKEA
Trigger: TGCTTCCTTAGAGGGTGCTCATACAAAATTCCAGTC...ATCACTTTCCATTAGCTGTATTGGCTTGCAGGTCACATTTTTACTACCAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp TTCTGTGTGTTCCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGATATATGAAAAACACTaGAACAGGTTGACACAATGC +
Preference number: 4 (lower is better)
Translates to: FCVFQYFGQLAHFKNKPQIYEKH*NRLTQC
Trigger: GCATTGTGTCAACCTGTTGCAGTGTTTTTCATATAT...CTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGGAACACACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR GCA 90 bp CTTTTCGTAGCTGGTATCAATCCTAAGGAGTGGCTCAATTCTTGCTCAATGCACTCAATTCTTGCTCAATaGACGACAAGCACACATTTA +
Preference number: 4 (lower is better)
Translates to: LFVAGINPKEWLNSCSMHSILAQ*TTSTHL
Trigger: TAAATGTGTGCTTGTCGTGCATTGAGCAAGAATTGA...GTGCATTGAGCAAGAATTGAGCCACTCCTTAGGATTGATACCAGCTACGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS CCA 90 bp GGAGGTGCAGGGGGTAGTGGTCGCCCGCGTCGCAGGCCGAGGACATaGCGAGGAGGCCGTAACCTGGTCCTCGTCGCCCGCCCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: GGAGGSGRPRRRPRT*RGGRNLVLVARPKS
Trigger: AGACTTGGGGCGGGCGACGAGGACCAGGTTACGGCCTCCTCGCCATGTCCTCGGCCTGCGACGCGGGCGACCACTACCCCCTGCACCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000550404.1
CDS-3UTR CAA 90 bp GTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGAGCCTCGAGAATTTTTaGGAGCAGCTCAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: VACCMHARCRPLALGPWLSLENF*EQLRNS
Trigger: GGAGTTCCTGAGCTGCTCCAAAAAATTCTCGAGGCT...CAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp TGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACATATCGACGCGCAGTTaGGCACCACTTTTCCAGATG +
Preference number: 5 (lower is better)
Translates to: CLLHARKVQALSPRALVDISTRS*APLFQM
Trigger: CATCTGGAAAAGTGGTGCCAAACTGCGCGTCGATAT...GTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp TGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACTCGGTGGTGACCACTTaGTCATCATGGTTGACTTCC +
Preference number: 5 (lower is better)
Translates to: CLLHARKVQALSPRALVDSVVTT*SSWLTS
Trigger: GGAAGTCAACCATGATGACAAAGTGGTCACCACCGA...GTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp TGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTATAAAGAAGGGGCAGTaGTTGCCTGCTGCATGCACG +
Preference number: 5 (lower is better)
Translates to: CCLLHARKVQALSPRALVIKKGQ*LPAACT
Trigger: CGTGCATGCAGCAGGCAACAACTGCCCCTTCTTTAT...AACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp CATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTTGCAGAGCTTTGATGTaGGCTGGGCTTCCCTTACCC +
Preference number: 5 (lower is better)
Translates to: HARKVQALSPRALVDTASCRALM*AGLPLP
Trigger: GGGTAAGGGAAGCCCAGCCAACATCAAAGCTCTGCA...AGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp ATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGCCCTTGTGCACCAAATaGGTGTTCCACAGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: MHARCRPLALGPWLTQHLPLCTK*VFHSSQ
Trigger: CTGGGAACTGTGGAACACCAATTTGGTGCACAAGGG...CAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp TGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACGCTTTTAGTTGCCATTaGAAACAAGCAGCATGGGGC +
Preference number: 5 (lower is better)
Translates to: CLLHARKVQALSPRALVDAFSCH*KQAAWG
Trigger: GCCCCATGCTGCTTGTTTCAAATGGCAACTAAAAGC...GTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS TCA 90 bp CCTGGATGGCCCTCTCATACTGGGCGTCATAGGTGTTTGTCTGGCTaGTCCCTCCATTCGAAGCTGGTCCTGAAAGTTCCTGGCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PGWPSHTGRHRCLSG*SLHSKLVLKVPGSC
Trigger: GCAGGAGCCAGGAACTTTCAGGACCAGCTTCGAATGGAGGGATCAGCCAGACAAACACCTATGACGCCCAGTATGAGAGGGCCATCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000553251.5
CDS TCA 90 bp ACCTGGCTTCCCTCTCGTGCCATTTTCACCTCTGCCTGTCTCCACTaGGACCACACCAAAGGCCACTTCACAGGCACTGTGTCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: TWLPSRAIFTSACLH*DHTKGHFTGTVSWW
Trigger: CCACCAAGACACAGTGCCTGTGAAGTGGCCTTTGGTGTGGTCTCAGTGGAGACAGGCAGAGGTGAAAATGGCACGAGAGGGAAGCCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550404.1
CDS-3UTR CAA 90 bp CAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGGAGGCGCTCCATTTCTaGGGAAAGGTCGAAGCGTTC +
Preference number: 5 (lower is better)
Translates to: QLAHFKNKPQVPLAAPSGEALHF*GKVEAF
Trigger: GAACGCTTCGACCTTTCCCAAGAAATGGAGCGCCTC...CCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp GCTAGCTGCAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACCATTCCTCCAGCTCTTaGGCAGAGAGCTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: ASCKSLSKRLVSLRALGHHSSSS*AESSMA
Trigger: AGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAATG...GTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAGCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR CAA 90 bp TGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACAATATTTTGGCCAGCTaGCCCACTTCAAGAACAAGC +
Preference number: 5 (lower is better)
Translates to: CLLHARKVQALSPRALVDNILAS*PTSRTS
Trigger: GCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATT...GTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp CTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCAGTGTGTTCCAATATTTaGGCCAGCTTGCCCACTTCA +
Preference number: 5 (lower is better)
Translates to: LHARKVQALSPRALVDTAVCSNI*ASLPTS
Trigger: TGAAGTGGGCAAGCTGGCCAAAATATTGGAACACAC...TGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS TCA 90 bp CTCCAGCTCACACCGAGAAACTCAGTGCAGCCCACAGAACAGAGCTaGGGCTCATTCTCTTGGCCAAAGATCTCCACGCGGAAAGTTCCG +
Preference number: 5 (lower is better)
Translates to: LQLTPRNSVQPTEQS*GSFSWPKISTRKVP
Trigger: CGGAACTTTCCGCGTGGAGATCTTTGGCCAAGAGAATGAGCCTCAGCTCTGTTCTGTGGGCTGCACTGAGTTTCTCGGTGTGAGCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp GCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACCTGGCGATTTTCTTTaGTCACATCTGCTTTATGTC +
Preference number: 5 (lower is better)
Translates to: ACCMHARCRPLALGPWLTPGDFL*SHLLYV
Trigger: GACATAAAGCAGATGTGACAAAAGAAAATCGCCAGG...TGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp AAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTGACAGCCGTGGTAGTCTCGATGTaGGAGAACTGTGTACACCAT +
Preference number: 5 (lower is better)
Translates to: KVQALSPRALVDTASVTAVVVSM*ENCVHH
Trigger: ATGGTGTACACAGTTCTCCAACATCGAGACTACCAC...GGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp GTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGAAGGGAATTTCTATTTaGACAGGAAATCCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: VACCMHARCRPLALGPWLKGISI*TGNPGG
Trigger: CCCACCTGGATTTCCTGTCAAAATAGAAATTCCCTT...CAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR CAA 90 bp ATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGGGTCCCTTCCACATTTaGAGATACAGATTCTTCGGC +
Preference number: 5 (lower is better)
Translates to: MHARCRPLALGPWLTQHLGPFHI*RYRFFG
Trigger: GCCGAAGAATCTGTATCTCAAAATGTGGAAGGGACC...CAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR CAA 90 bp AAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTGACAGCCGGTCCCTTCCACATTTaGAGATACAGATTCTTCGGC +
Preference number: 5 (lower is better)
Translates to: KVQALSPRALVDTASVTAGPFHI*RYRFFG
Trigger: GCCGAAGAATCTGTATCTCAAAATGTGGAAGGGACC...GGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000547419.6
ENST00000551491.1
CDS-3UTR CAA 90 bp CTAGCTGCAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACACATTATCAAAACGGCTaGTCTCGCTCAGGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: LAASHYQNGLSRSGRWGTHYQNG*SRSGRW
Trigger: CCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATG...TGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS TCA 90 bp CCTGGATGGCCCTCTCATACTGGGCGTCATAGGTGTTTGTCTGGCTaGTCCCTCCATTCGAAGCTGGTCCTGAAAGTTCCTGGCAAAGAC +
Preference number: 5 (lower is better)
Translates to: PGWPSHTGRHRCLSG*SLHSKLVLKVPGKD
Trigger: GTCTTTGCCAGGAACTTTCAGGACCAGCTTCGAATGGAGGGATCAGCCAGACAAACACCTATGACGCCCAGTATGAGAGGGCCATCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553246.1
CDS TCA 90 bp CCTGGATGGCCCTCTCATACTGGGCGTCATAGGTGTTTGTCTGGCTaGTCCCTCCATTCGAAGCTGGTCCTGAAAGTTCCTGAATCAGCC +
Preference number: 5 (lower is better)
Translates to: PGWPSHTGRHRCLSG*SLHSKLVLKVPESA
Trigger: GGCTGATTCAGGAACTTTCAGGACCAGCTTCGAATGGAGGGATCAGCCAGACAAACACCTATGACGCCCAGTATGAGAGGGCCATCCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR CAA 90 bp TGTTGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTAAGGGAATTTCTATTTaGACAGGAAATCCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: CCLLHARKVQALSPRALVKGISI*TGNPGG
Trigger: CCCACCTGGATTTCCTGTCAAAATAGAAATTCCCTT...AACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR CAA 90 bp TGCCTGCTGCATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACATTTCTGCCATTGTCTaGAACATAGTAAGATTCGGG +
Preference number: 5 (lower is better)
Translates to: CLLHARKVQALSPRALVDISAIV*NIVRFG
Trigger: CCCGAATCTTACTATGTTCAAGACAATGGCAGAAAT...GTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATGCAGCAGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR CAA 90 bp AAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTGACAGCCCAAACAAATGTGACGTaGCCTATACTGGCCTCATGT +
Preference number: 5 (lower is better)
Translates to: KVQALSPRALVDTASVTAQTNVT*PILASC
Trigger: ACATGAGGCCAGTATAGGCAACGTCACATTTGTTTG...GGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS GCA 90 bp AAGATGATAGAACACCTGGCTTCCCTCTCGTGCCATTTTCACCTCTaGCTGTCTCCACTGAGACCACACCAAAGGCCACTTCACAGGCAC +
Preference number: 5 (lower is better)
Translates to: KMIEHLASLSCHFHL*LSPLRPHQRPLHRH
Trigger: GTGCCTGTGAAGTGGCCTTTGGTGTGGTCTCAGTGGAGACAGGCAGAGGTGAAAATGGCACGAGAGGGAAGCCAGGTGTTCTATCATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550404.1
CDS-3UTR CAA 90 bp GTGGTGAGGTCCCCTTGTGCACCAAATTGGTGTTCCACAGTTCCCAGCAAAGATGAGGCGCTCCATTTCTaGGGAAAGGTCGAAGCGTTC +
Preference number: 5 (lower is better)
Translates to: VVRSPCAPNWCSTVPSKDEALHF*GKVEAF
Trigger: GAACGCTTCGACCTTTCCCAAGAAATGGAGCGCCTC...ATCTTTGCTGGGAACTGTGGAACACCAATTTGGTGCACAAGGGGACCTCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp TTCAGTGCAGCCTGTGGGAATGAATACACGGGCCACAGTGAGCAGTGCCCTTGGCAACTTCCCTGCTTTTaGGCTTCATCAAGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: FSAACGNEYTGHSEQCPWQLPCF*ASSSPE
Trigger: CTCTGGACTTGATGAAGCCAAAAAGCAGGGAAGTTG...CCAAGGGCACTGCTCACTGTGGCCCGTGTATTCATTCCCACAGGCTGCACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp TTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGACAGGATTAGCTCGTGGTGAGGTCCCCTaGTGCACCAAATTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: FKNKPQVPLAAPSGTGLARGEVP*CTKLVF
Trigger: GAACACCAATTTGGTGCACAAGGGGACCTCACCACG...AGCTAATCCTGTCCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp GGGAATGACCTGCTCCACCAGAGAGAGGGGAAACTCTTCACACATCCACAACATCGTGGTGAGGTCCCCTaGTGCACCAAATTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: GNDLLHQREGKLFTHPQHRGEVP*CTKLVF
Trigger: GAACACCAATTTGGTGCACAAGGGGACCTCACCACG...ATGTTGTGGATGTGTGAAGAGTTTCCCCTCTCTCTGGTGGAGCAGGTCATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp GTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGGCCTTCTGTGGTCCCTTCCACATTTaGAGATACAGATTCTTCGGC +
Preference number: 5 (lower is better)
Translates to: VIIKTACLAQGAGAQAFCGPFHI*RYRFFG
Trigger: GCCGAAGAATCTGTATCTCAAAATGTGGAAGGGACC...ACAGAAGGCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR CAA 90 bp CATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTCTCGTAATCTTCATCTaGCAAATGCACATTTCTGCC +
Preference number: 5 (lower is better)
Translates to: HARKVQALSPRALVDTASLVIFI*QMHISA
Trigger: GGCAGAAATGTGCATTTGCAAGATGAAGATTACGAG...AGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547419.6
CDS-3UTR CAA 90 bp GAGGACCACAGAGGTGTCAGAACAGCCCAACACTGGCTTGCTTTTAGTTGCCATCATTATCAAAACGGCTaGTCTCGCTCAGGGCGCTGG +
Preference number: 5 (lower is better)
Translates to: EDHRGVRTAQHWLAFSCHHYQNG*SRSGRW
Trigger: CCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATG...ATGGCAACTAAAAGCAAGCCAGTGTTGGGCTGTTCTGACACCTCTGTGGTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp CAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGCAGCTCCCTTTCTGGTaGCAAATCAATCCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: QLAHFKNKPQVPLAAPSGQLPFW*QINPSS
Trigger: AGAGGAAGGATTGATTTGCAACCAGAAAGGGAGCTG...CCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp ATGCACGCAAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGCCAGGGTTCTGTATGTaGTGCGATGGTTATATACAA +
Preference number: 5 (lower is better)
Translates to: MHARCRPLALGPWLTQHLPGFCM*CDGYIQ
Trigger: TTGTATATAACCATCGCACAACATACAGAACCCTGG...CAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTTGCGTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp GGGAATGACCTGCTCCACCAGAGAGAGGGGAAACTCTTCACACATCCACAACATCTGAGGCTCATTCTCTaGGCCAAAGATCTCCACGCG +
Preference number: 5 (lower is better)
Translates to: GNDLLHQREGKLFTHPQHLRLIL*AKDLHA
Trigger: CGCGTGGAGATCTTTGGCCAAGAGAATGAGCCTCAG...ATGTTGTGGATGTGTGAAGAGTTTCCCCTCTCTCTGGTGGAGCAGGTCATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS CCA 90 bp GTTAATGACAGGGCTTGTGAGCCGCCGCTCAACTTCCCTGCTTTTTaGCTTCATCAAGTCCAGAGTGAGGCGCTCCATTTCTTGGGAAAG +
Preference number: 5 (lower is better)
Translates to: VNDRACEPPLNFPAF*LHQVQSEALHFLGK
Trigger: CTTTCCCAAGAAATGGAGCGCCTCACTCTGGACTTGATGAAGCCAAAAAGCAGGGAAGTTGAGCGGCGGCTCACAAGCCCTGTCATTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000261739.9
ENST00000547639.5
ENST00000550404.1
ENST00000553025.5
CDS-3UTR CAA 90 bp AAGGTGCAGGCCCTTAGCCCTAGGGCCCTGGTTGACACAGCATCTGTGACAGCCTGTTCTGTGCGTATTTaGGTGATCACATTCACATTG +
Preference number: 5 (lower is better)
Translates to: KVQALSPRALVDTASVTACSVRI*VITFTL
Trigger: CAATGTGAATGTGATCACCAAAATACGCACAGAACA...GGCTGTCACAGATGCTGTGTCAACCAGGGCCCTAGGGCTAAGGGCCTGCACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp TTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGACAGGATTAGCTGTGATGGCTGTGGGGTaGTTTGCAGTAGCACATTCC +
Preference number: 5 (lower is better)
Translates to: FKNKPQVPLAAPSGTGLAVMAVG*FAVAHS
Trigger: GGAATGTGCTACTGCAAACAACCCCACAGCCATCAC...AGCTAATCCTGTCCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp GCTGCAAGTCATTATCAAAACGGCTTGTCTCGCTCAGGGCGCTGGGGCACAGGCAAGGGAATTTCTATTTaGACAGGAAATCCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: AASHYQNGLSRSGRWGTGKGISI*TGNPGG
Trigger: CCCACCTGGATTTCCTGTCAAAATAGAAATTCCCTT...GCCTGTGCCCCAGCGCCCTGAGCGAGACAAGCCGTTTTGATAATGACTTGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS-3UTR CAA 90 bp GAGGACCACAGAGGTGTCAGAACAGCCCAACACTGGCTTGCTTTTAGTTGCCATGGACTCCAGCAGACTTaGCTGGATGGCAAACTGCAT +
Preference number: 5 (lower is better)
Translates to: EDHRGVRTAQHWLAFSCHGLQQT*LDGKLH
Trigger: ATGCAGTTTGCCATCCAGCAAAGTCTGCTGGAGTCC...ATGGCAACTAAAAGCAAGCCAGTGTTGGGCTGTTCTGACACCTCTGTGGTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp CTTCAAGGGATAGCATTGATGCAGAGCTTTGATGTTGGCTGGGCTTCCCTTACCCATTCCTCCAGCTCTTaGGCAGAGAGCTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: LQGIALMQSFDVGWASLTHSSSS*AESSMA
Trigger: AGCCATGGAGCTCTCTGCCAAAGAGCTGGAGGAATG...GGTAAGGGAAGCCCAGCCAACATCAAAGCTCTGCATCAATGCTATCCCTTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS CCA 90 bp GACGCGCAGTTTGGCACCACTTTTCCAGATGCGACAGACATCATTTaGGCATATTCTAGAAACCAAGGGCACCCAGCTGGTGAATTCCCA +
Preference number: 5 (lower is better)
Translates to: DAQFGTTFPDATDII*AYSRNQGHPAGEFP
Trigger: TGGGAATTCACCAGCTGGGTGCCCTTGGTTTCTAGAATATGCCCAAATGATGTCTGTCGCATCTGGAAAAGTGGTGCCAAACTGCGCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000550404.1
ENST00000553025.5
CDS CCA 90 bp TCCAAGGGCTTGCCACAAGGTGGTAACCAGGTCAGAGCATTTATCTaGGTCATCTTAACTGGGGACATGCATGTCAATGGTGGGATCTCC +
Preference number: 5 (lower is better)
Translates to: SKGLPQGGNQVRAFI*VILTGDMHVNGGIS
Trigger: GGAGATCCCACCATTGACATGCATGTCCCCAGTTAAGATGACCCAGATAAATGCTCTGACCTGGTTACCACCTTGTGGCAAGCCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS-3UTR CAA 90 bp GGGAATGACCTGCTCCACCAGAGAGAGGGGAAACTCTTCACACATCCACAACATATATCGACGCGCAGTTaGGCACCACTTTTCCAGATG +
Preference number: 5 (lower is better)
Translates to: GNDLLHQREGKLFTHPQHISTRS*APLFQM
Trigger: CATCTGGAAAAGTGGTGCCAAACTGCGCGTCGATAT...ATGTTGTGGATGTGTGAAGAGTTTCCCCTCTCTCTGGTGGAGCAGGTCATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp GCACATTCCGTGGTGAGGTCCCCTTGTGCACCAAATTGGTGTTCCACAGTTCCCACTTTGTCATCATGGTaGACTTCCATTAACTCCGCC +
Preference number: 5 (lower is better)
Translates to: AHSVVRSPCAPNWCSTVPTLSSW*TSINSA
Trigger: GGCGGAGTTAATGGAAGTCAACCATGATGACAAAGT...GGGAACTGTGGAACACCAATTTGGTGCACAAGGGGACCTCACCACGGAATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp TGTGACGTTGCCTATACTGGCCTCATGTGCAGAAGGAATTTTGGTCAGACAATGCAAGCAGCATGGGGCTaGTTAACCTGGGCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: CDVAYTGLMCRRNFGQTMQAAWG*LTWAGR
Trigger: CCTTCCTGCCCAGGTTAACAAGCCCCATGCTGCTTG...CATTGTCTGACCAAAATTCCTTCTGCACATGAGGCCAGTATAGGCAACGTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS GCA 90 bp AGCAGTCCCAAAGAAGTGACTGAAGATGACCAGCATCCAAGGGCTTaGCACAAGGTGGTAACCAGGTCAGAGCATTTATCTGGGTCATCT +
Preference number: 5 (lower is better)
Translates to: SSPKEVTEDDQHPRA*HKVVTRSEHLSGSS
Trigger: AGATGACCCAGATAAATGCTCTGACCTGGTTACCACCTTGTGGCAAGCCCTTGGATGCTGGTCATCTTCAGTCACTTCTTTGGGACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS GCA 90 bp GGTCCTATTGTCCACAGGAGGCGGTTAGCAATGACAGATGGCTTATaGACCCTCCACCCTCCTCCCACAGTTATTAATCAATTTGCCTCA +
Preference number: 5 (lower is better)
Translates to: GPIVHRRRLAMTDGL*TLHPPPTVINQFAS
Trigger: TGAGGCAAATTGATTAATAACTGTGGGAGGAGGGTGGAGGGTGCATAAGCCATCTGTCATTGCTAACCGCCTCCTGTGGACAATAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS-3UTR CAA 90 bp GGGAATGACCTGCTCCACCAGAGAGAGGGGAAACTCTTCACACATCCACAACATGTGGTAGTCTCGATGTaGGAGAACTGTGTACACCAT +
Preference number: 5 (lower is better)
Translates to: GNDLLHQREGKLFTHPQHVVVSM*ENCVHH
Trigger: ATGGTGTACACAGTTCTCCAACATCGAGACTACCAC...ATGTTGTGGATGTGTGAAGAGTTTCCCCTCTCTCTGGTGGAGCAGGTCATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp TGTGACGTTGCCTATACTGGCCTCATGTGCAGAAGGAATTTTGGTCAGACAATGAAGAAGGGGCAGTTGTaGCCTGCTGCATGCACGCAA +
Preference number: 5 (lower is better)
Translates to: CDVAYTGLMCRRNFGQTMKKGQL*PAACTQ
Trigger: TTGCGTGCATGCAGCAGGCAACAACTGCCCCTTCTT...CATTGTCTGACCAAAATTCCTTCTGCACATGAGGCCAGTATAGGCAACGTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS GCA 90 bp AGTAAGACTCGAGCAGATTCCAAATGTCCCAAGGAAACAGCAAGATaGAATAATGTTCGACCTCGTGGGTCCACAGCCTCCACATTCTGG +
Preference number: 5 (lower is better)
Translates to: SKTRADSKCPKETAR*NNVRPRGSTASTFW
Trigger: CCAGAATGTGGAGGCTGTGGACCCACGAGGTCGAACATTATTGCATCTTGCTGTTTCCTTGGGACATTTGGAATCTGCTCGAGTCTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000550404.1
CDS GCA 90 bp AGTCTCGATGTTGGAGAACTGTGTACACCATCTCAGGATCGCCAGTaGTCACAGCCTCATGTAAAACTGTCCATCCCTGGCGATTTTCTT +
Preference number: 5 (lower is better)
Translates to: SLDVGELCTPSQDRQ*SQPHVKLSIPGDFL
Trigger: AAGAAAATCGCCAGGGATGGACAGTTTTACATGAGGCTGTGAGCACTGGCGATCCTGAGATGGTGTACACAGTTCTCCAACATCGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000550404.1
ENST00000553025.5
CDS GCA 90 bp AGTAAGACTCGAGCAGATTCCAAATGTCCCAAGGAAACAGCAAGATaGAATAATGTTCGACCTCGTGGGTCCACAGCCTCCACATTCTCC +
Preference number: 5 (lower is better)
Translates to: SKTRADSKCPKETAR*NNVRPRGSTASTFS
Trigger: GGAGAATGTGGAGGCTGTGGACCCACGAGGTCGAACATTATTGCATCTTGCTGTTTCCTTGGGACATTTGGAATCTGCTCGAGTCTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS GCA 90 bp AGACTGAGGTCATCTCCACCAGATGGGAAAAGGAGATTATTGCTATaGAGTAGGCTAGACAACAGCAGCTTTACTCCACACTCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: RLRSSPPDGKRRLLL*SRLDNSSFTPHSAQ
Trigger: CTGGGCAGAGTGTGGAGTAAAGCTGCTGTTGTCTAGCCTACTGCATAGCAATAATCTCCTTTTCCCATCTGGTGGAGATGACCTCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549826.1
CDS-3UTR CAA 90 bp GTGGGGTTGTTTGCAGTAGCACATTCCGTGGTGAGGTCCCCTTGTGCACCAAATAGATCAAACTCTTCATaGAAGTACTCATCAGGCGTG +
Preference number: 5 (lower is better)
Translates to: VGLFAVAHSVVRSPCAPNRSNSS*KYSSGV
Trigger: CACGCCTGATGAGTACTTCAATGAAGAGTTTGATCT...ATTTGGTGCACAAGGGGACCTCACCACGGAATGTGCTACTGCAAACAACCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp GTGAGCAGTGCCCTTGGCTGTATTCCCCAGGGTTCTGTATGTTGTGCGATGGTTCTCGTAATCTTCATCTaGCAAATGCACATTTCTGCC +
Preference number: 5 (lower is better)
Translates to: VSSALGCIPQGSVCCAMVLVIFI*QMHISA
Trigger: GGCAGAAATGTGCATTTGCAAGATGAAGATTACGAG...AACCATCGCACAACATACAGAACCCTGGGGAATACAGCCAAGGGCACTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS CCA 90 bp TCTTGGGAAAGGTCGAAGCGTTCGGTGGTGACCACTTTGTCATCATaGTTGACTTCCATTAACTCCGCCCAGTTGTCTTCTCCCTTAAAT +
Preference number: 5 (lower is better)
Translates to: SWERSKRSVVTTLSS*LTSINSAQLSSPLN
Trigger: ATTTAAGGGAGAAGACAACTGGGCGGAGTTAATGGAAGTCAACCATGATGACAAAGTGGTCACCACCGAACGCTTCGACCTTTCCCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261739.9
ENST00000547639.5
ENST00000550404.1
ENST00000553025.5
CDS-3UTR CAA 90 bp GTGGTGAGGTCCCCTTGTGCACCAAATTGGTGTTCCACAGTTCCCAGCAAAGATCCTGGCGATTTTCTTTaGTCACATCTGCTTTATGTC +
Preference number: 5 (lower is better)
Translates to: VVRSPCAPNWCSTVPSKDPGDFL*SHLLYV
Trigger: GACATAAAGCAGATGTGACAAAAGAAAATCGCCAGG...ATCTTTGCTGGGAACTGTGGAACACCAATTTGGTGCACAAGGGGACCTCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp CTTCAAGGGATAGCATTGATGCAGAGCTTTGATGTTGGCTGGGCTTCCCTTACCACTTTGTCATCATGGTaGACTTCCATTAACTCCGCC +
Preference number: 5 (lower is better)
Translates to: LQGIALMQSFDVGWASLTTLSSW*TSINSA
Trigger: GGCGGAGTTAATGGAAGTCAACCATGATGACAAAGT...GGTAAGGGAAGCCCAGCCAACATCAAAGCTCTGCATCAATGCTATCCCTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp GTAGCTGGTATCAATCCTAAGGAGTGGCTCAATTCTTGCTCAATGCACGACAAGTCGGTGGTGACCACTTaGTCATCATGGTTGACTTCC +
Preference number: 5 (lower is better)
Translates to: VAGINPKEWLNSCSMHDKSVVTT*SSWLTS
Trigger: GGAAGTCAACCATGATGACAAAGTGGTCACCACCGA...CTTGTCGTGCATTGAGCAAGAATTGAGCCACTCCTTAGGATTGATACCAGCTAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp TTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGACAGGATTAGCTAGATCAAACTCTTCATaGAAGTACTCATCAGGCGTG +
Preference number: 5 (lower is better)
Translates to: FKNKPQVPLAAPSGTGLARSNSS*KYSSGV
Trigger: CACGCCTGATGAGTACTTCAATGAAGAGTTTGATCT...AGCTAATCCTGTCCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp GAGGACCACAGAGGTGTCAGAACAGCCCAACACTGGCTTGCTTTTAGTTGCCATTCAAAGACTGGAATTTaGTATGAGCACCCTCTAAGG +
Preference number: 5 (lower is better)
Translates to: EDHRGVRTAQHWLAFSCHSKTGI*YEHPLR
Trigger: CCTTAGAGGGTGCTCATACAAAATTCCAGTCTTTGA...ATGGCAACTAAAAGCAAGCCAGTGTTGGGCTGTTCTGACACCTCTGTGGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp CCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCCTTCAAGGGATAGCATaGATGCAGAGCTTTGATGTT +
Preference number: 5 (lower is better)
Translates to: PIFWPACPLQEQASGSPSLQGIA*MQSFDV
Trigger: AACATCAAAGCTCTGCATCAATGCTATCCCTTGAAG...GCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp GTAGCTGGTATCAATCCTAAGGAGTGGCTCAATTCTTGCTCAATGCACGACAAGCAACTTCCCTGCTTTTaGGCTTCATCAAGTCCAGAG +
Preference number: 5 (lower is better)
Translates to: VAGINPKEWLNSCSMHDKQLPCF*ASSSPE
Trigger: CTCTGGACTTGATGAAGCCAAAAAGCAGGGAAGTTG...CTTGTCGTGCATTGAGCAAGAATTGAGCCACTCCTTAGGATTGATACCAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp TTTTCCTCCTCGGTCAGATGTTCTGTGCGTATTTTGGTGATCACATTCACATTGGTGATGGCTGTGGGGTaGTTTGCAGTAGCACATTCC +
Preference number: 5 (lower is better)
Translates to: FSSSVRCSVRILVITFTLVMAVG*FAVAHS
Trigger: GGAATGTGCTACTGCAAACAACCCCACAGCCATCAC...CAATGTGAATGTGATCACCAAAATACGCACAGAACATCTGACCGAGGAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp TTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGACAGGATTAGCTATTTCTGCCATTGTCTaGAACATAGTAAGATTCGGG +
Preference number: 5 (lower is better)
Translates to: FKNKPQVPLAAPSGTGLAISAIV*NIVRFG
Trigger: CCCGAATCTTACTATGTTCAAGACAATGGCAGAAAT...AGCTAATCCTGTCCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp TTCAAGAACAAGCCTCAGGTTCCCCTAGCTGCTCCTTCAGGGACAGGATTAGCTTCATTATTTTCCCTTTaGAATGAAGAGCCATGGAGC +
Preference number: 5 (lower is better)
Translates to: FKNKPQVPLAAPSGTGLASLFSL*NEEPWS
Trigger: GCTCCATGGCTCTTCATTCAAAAGGGAAAATAATGA...AGCTAATCCTGTCCCTGAAGGAGCAGCTAGGGGAACCTGAGGCTTGTTCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp CCAATATTTTGGCCAGCTTGCCCACTTCAAGAACAAGCCTCAGGTTCCCCTAGCTTCCAAGAAGTATCTTaGCTCACGGTAAATGCAAAG +
Preference number: 5 (lower is better)
Translates to: PIFWPACPLQEQASGSPSFQEVS*LTVNAK
Trigger: CTTTGCATTTACCGTGAGCAAAGATACTTCTTGGAA...GCTAGGGGAACCTGAGGCTTGTTCTTGAAGTGGGCAAGCTGGCCAAAATATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS GCA 90 bp CTGCTCCACCAGAGAGAGGGGAAACTCTTCACACATCCACAACATTaGTTTAAACCTGCAGAATTCAACCAAGAAAAGACTGAGGTCATC +
Preference number: 5 (lower is better)
Translates to: LLHQREGKLFTHPQH*FKPAEFNQEKTEVI
Trigger: GATGACCTCAGTCTTTTCTTGGTTGAATTCTGCAGGTTTAAAGCAATGTTGTGGATGTGTGAAGAGTTTCCCCTCTCTCTGGTGGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549826.1
CDS-3UTR CAA 90 bp GTGGAAATCCTTCACTCATGCAGGTGTAGAACACACCTGGTTTGGTTCTGTGTGAAATGGAGGAGGGTGTaGTTTACCAGGTTATTTCAG +
Preference number: 5 (lower is better)
Translates to: VEILHSCRCRTHLVWFCVKWRRV*FTRLFQ
Trigger: CTGAAATAACCTGGTAAACAACACCCTCCTCCATTT...CACACAGAACCAAACCAGGTGTGTTCTACACCTGCATGAGTGAAGGATTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS TCA 90 bp ATTCACATCACCCTAAAATCTGGCAATAAAGGCAAGCGACCTGCATaGCAACCTGCCACGATCAAAGCCTTAATTGACAGCAAGCATGAA +
Preference number: 5 (lower is better)
Translates to: IHITLKSGNKGKRPA*QPATIKALIDSKHE
Trigger: TTCATGCTTGCTGTCAATTAAGGCTTTGATCGTGGCAGGTTGTCATGCAGGTCGCTTGCCTTTATTGCCAGATTTTAGGGTGATGTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549826.1
CDS-3UTR CAA 90 bp CTTCAAGGGATAGCATTGATGCAGAGCTTTGATGTTGGCTGGGCTTCCCTTACCATGTATAACCTTGTATaGCTACTGATGGGAGTTGTT +
Preference number: 5 (lower is better)
Translates to: LQGIALMQSFDVGWASLTMYNLV*LLMGVV
Trigger: AACAACTCCCATCAGTAGCAATACAAGGTTATACAT...GGTAAGGGAAGCCCAGCCAACATCAAAGCTCTGCATCAATGCTATCCCTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp CAACATTGCTTTAAACTTCTGTGTTCTAATCGTCAGCTCTTTCGGCCTTCCAATGGAGTGGCTCAATTCTaGCTCAATGCACGACAAGCA +
Preference number: 5 (lower is better)
Translates to: QHCFKLLCSNRQLFRPSNGVAQF*LNARQA
Trigger: TGCTTGTCGTGCATTGAGCAAGAATTGAGCCACTCC...ATTGGAAGGCCGAAAGAGCTGACGATTAGAACACAGAAGTTTAAAGCAATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp CTTTTCGTAGCTGGTATCAATCCTAAGGAGTGGCTCAATTCTTGCTCAATGCACAAGGGAATTTCTATTTaGACAGGAAATCCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: LFVAGINPKEWLNSCSMHKGISI*TGNPGG
Trigger: CCCACCTGGATTTCCTGTCAAAATAGAAATTCCCTT...GTGCATTGAGCAAGAATTGAGCCACTCCTTAGGATTGATACCAGCTACGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp GTGGAAATCCTTCACTCATGCAGGTGTAGAACACACCTGGTTTGGTTCTGTGTGAGATTACCCATTTCTTaGGTGAACAGTAAAGAAGTG +
Preference number: 5 (lower is better)
Translates to: VEILHSCRCRTHLVWFCVRLPIS*VNSKEV
Trigger: CACTTCTTTACTGTTCACCAAAGAAATGGGTAATCT...CACACAGAACCAAACCAGGTGTGTTCTACACCTGCATGAGTGAAGGATTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261739.9
CDS-3UTR CAA 90 bp GGTATCAATCCTAAGGAGTGGCTCAATTCTTGCTCAATGCACGACAAGCACACATGCAAAAGAGTTAGCTaGAGAACTCTGAAAACCCTT +
Preference number: 5 (lower is better)
Translates to: GINPKEWLNSCSMHDKHTCKRVS*RTLKTL
Trigger: AAGGGTTTTCAGAGTTCTCAAGCTAACTCTTTTGCA...TGTGTGCTTGTCGTGCATTGAGCAAGAATTGAGCCACTCCTTAGGATTGATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS-3UTR CAA 90 bp ATTGTTTACTGTGTAAACCTCACATTCAAGAGCAGCTATATTCTTTTCGTAGCTCCCTTGTGCACCAAATaGGTGTTCCACAGTTCCCAG +
Preference number: 5 (lower is better)
Translates to: IVYCVNLTFKSSYILFVAPLCTK*VFHSSQ
Trigger: CTGGGAACTGTGGAACACCAATTTGGTGCACAAGGG...AGCTACGAAAAGAATATAGCTGCTCTTGAATGTGAGGTTTACACAGTAAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS TCA 90 bp GTTTCCCTGTCTAGCTTTGATAGTGGAAAGGTAATTTCATTTTTCTaGCCCGCAGGGACATCCACTGTACCAAGTTCATATAGTTACTGT +
Preference number: 5 (lower is better)
Translates to: VSLSSFDSGKVISFF*PAGTSTVPSSYSYC
Trigger: ACAGTAACTATATGAACTTGGTACAGTGGATGTCCCTGCGGGTCAGAAAAATGAAATTACCTTTCCACTATCAAAGCTAGACAGGGAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553251.5
CDS-3UTR CAA 90 bp AAGGAGTGGCTCAATTCTTGCTCAATGCACGACAAGCACACATTTAATTCTGAGTGTTCTGTGCGTATTTaGGTGATCACATTCACATTG +
Preference number: 5 (lower is better)
Translates to: KEWLNSCSMHDKHTFNSECSVRI*VITFTL
Trigger: CAATGTGAATGTGATCACCAAAATACGCACAGAACA...CTCAGAATTAAATGTGTGCTTGTCGTGCATTGAGCAAGAATTGAGCCACTCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS GCA 90 bp ATTGTTTACTGTGTAAACCTTTGCTTCGTAACCATTAACAACTTCTaGTTTATCTGTCCTCCAGCCCCAGAATCCGGATTTAGTTCTTTC +
Preference number: 5 (lower is better)
Translates to: IVYCVNLCFVTINNF*FICPPAPESGFSSF
Trigger: GAAAGAACTAAATCCGGATTCTGGGGCTGGAGGACAGATAAAGCAGAAGTTGTTAATGGTTACGAAGCAAAGGTTTACACAGTAAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000547639.5
CDS GCA 90 bp ATTGTTTACTGTGTAAACCTTTGCTTCGTAACCATTAACAACTTCTaGTTTATCTGTCCTCCAGCCCCAGAATCCGGATTTAGTTCTGAT +
Preference number: 5 (lower is better)
Translates to: IVYCVNLCFVTINNF*FICPPAPESGFSSD
Trigger: ATCAGAACTAAATCCGGATTCTGGGGCTGGAGGACAGATAAAGCAGAAGTTGTTAATGGTTACGAAGCAAAGGTTTACACAGTAAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS TCA 90 bp ATCTGTCCTCCAGCCCCAGAATCCGGATTTAGTTCTGATAAAAAGTaGACACCACAAATTTCTACATGTACAATATGCCATTCAGATTTA +
Preference number: 5 (lower is better)
Translates to: ICPPAPESGFSSDKK*TPQISTCTICHSDL
Trigger: TAAATCTGAATGGCATATTGTACATGTAGAAATTTGTGGTGTTCACTTTTTATCAGAACTAAATCCGGATTCTGGGGCTGGAGGACAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS CCA 72 bp GTCGCAGGCCGAGGACATGGCGAGGAGGCCGTAACCTaGTCCTCGTCGCCCGCCCCAAGTCTCGGCCCCGGC +
Preference number: 6 (lower is better)
Translates to: VAGRGHGEEAVT*SSSPAPSLGPG
Trigger: GCCGGGGCCGAGACTTGGGGCGGGCGACGAGGACCAGGTTACGGCCTCCTCGCCATGTCCTCGGCCTGCGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000550404.1
CDS CCA 72 bp GGGGGTAGTGGTCGCCCGCGTCGCAGGCCGAGGACATaGCGAGGAGGCCGTAACCTGGTCCTCGTCGCCCGC +
Preference number: 6 (lower is better)
Translates to: GGSGRPRRRPRT*RGGRNLVLVAR
Trigger: GCGGGCGACGAGGACCAGGTTACGGCCTCCTCGCCATGTCCTCGGCCTGCGACGCGGGCGACCACTACCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261739.9
ENST00000550404.1
CDS TCA 72 bp CCCTCTCGTGCCATTTTCACCTCTGCCTGTCTCCACTaGGACCACACCAAAGGCCACTTCACAGGCACTGTG +
Preference number: 6 (lower is better)
Translates to: PSRAIFTSACLH*DHTKGHFTGTV
Trigger: CACAGTGCCTGTGAAGTGGCCTTTGGTGTGGTCTCAGTGGAGACAGGCAGAGGTGAAAATGGCACGAGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550404.1
CDS TCA 72 bp ACACCGAGAAACTCAGTGCAGCCCACAGAACAGAGCTaGGGCTCATTCTCTTGGCCAAAGATCTCCACGCGG +
Preference number: 6 (lower is better)
Translates to: TPRNSVQPTEQS*GSFSWPKISTR
Trigger: CCGCGTGGAGATCTTTGGCCAAGAGAATGAGCCTCAGCTCTGTTCTGTGGGCTGCACTGAGTTTCTCGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS GCA 72 bp GAACACCTGGCTTCCCTCTCGTGCCATTTTCACCTCTaGCTGTCTCCACTGAGACCACACCAAAGGCCACTT +
Preference number: 6 (lower is better)
Translates to: EHLASLSCHFHL*LSPLRPHQRPL
Trigger: AAGTGGCCTTTGGTGTGGTCTCAGTGGAGACAGGCAGAGGTGAAAATGGCACGAGAGGGAAGCCAGGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550404.1
CDS CAA 90 bp GAGAAACTCAGTGCAGCCCACAGAACAGAGCTGAGGCTCATTCTCTaGGCCAAAGATCTCCACGCGGAAAGTTCCGTCTACCTGTCCCCA +
Preference number: 6 (lower is better)
Translates to: EKLSAAHRTELRLIL*AKDLHAESSVYLSP
Trigger: TGGGGACAGGTAGACGGAACTTTCCGCGTGGAGATCTTTGGCCAAGAGAATGAGCCTCAGCTCTGTTCTGTGGGCTGCACTGAGTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS CAA 72 bp AGTGCAGCCCACAGAACAGAGCTGAGGCTCATTCTCTaGGCCAAAGATCTCCACGCGGAAAGTTCCGTCTAC +
Preference number: 6 (lower is better)
Translates to: SAAHRTELRLIL*AKDLHAESSVY
Trigger: GTAGACGGAACTTTCCGCGTGGAGATCTTTGGCCAAGAGAATGAGCCTCAGCTCTGTTCTGTGGGCTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553025.5
CDS CAA 90 bp AGGAACTCCCTCAAGGGCCATGGATGTGTTGTGGTAGTCTCGATGTaGGAGAACTGTGTACACCATCTCAGGATCGCCAGTGCTCACAGC +
Preference number: 6 (lower is better)
Translates to: RNSLKGHGCVVVVSM*ENCVHHLRIASAHS
Trigger: GCTGTGAGCACTGGCGATCCTGAGATGGTGTACACAGTTCTCCAACATCGAGACTACCACAACACATCCATGGCCCTTGAGGGAGTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000550404.1
ENST00000553025.5
CDS TCA 72 bp CCCTCTCATACTGGGCGTCATAGGTGTTTGTCTGGCTaGTCCCTCCATTCGAAGCTGGTCCTGAAAGTTCCT +
Preference number: 6 (lower is better)
Translates to: PSHTGRHRCLSG*SLHSKLVLKVP
Trigger: AGGAACTTTCAGGACCAGCTTCGAATGGAGGGATCAGCCAGACAAACACCTATGACGCCCAGTATGAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261739.9
ENST00000551491.1
ENST00000553246.1
ENST00000553251.5
CDS CCA 72 bp TCCTATTGTCCACAGGAGGCGGTTAGCAATGACAGATaGCTTATGCACCCTCCACCCTCCTCCCACAGTTAT +
Preference number: 6 (lower is better)
Translates to: SYCPQEAVSNDR*LMHPPPSSHSY
Trigger: ATAACTGTGGGAGGAGGGTGGAGGGTGCATAAGCCATCTGTCATTGCTAACCGCCTCCTGTGGACAATAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS GCA 72 bp CGAGCAGATTCCAAATGTCCCAAGGAAACAGCAAGATaGAATAATGTTCGACCTCGTGGGTCCACAGCCTCC +
Preference number: 6 (lower is better)
Translates to: RADSKCPKETAR*NNVRPRGSTAS
Trigger: GGAGGCTGTGGACCCACGAGGTCGAACATTATTGCATCTTGCTGTTTCCTTGGGACATTTGGAATCTGCTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000550404.1
ENST00000553025.5
CDS GCA 72 bp GTCCACAGGAGGCGGTTAGCAATGACAGATGGCTTATaGACCCTCCACCCTCCTCCCACAGTTATTAATCAA +
Preference number: 6 (lower is better)
Translates to: VHRRRLAMTDGL*TLHPPPTVINQ
Trigger: TTGATTAATAACTGTGGGAGGAGGGTGGAGGGTGCATAAGCCATCTGTCATTGCTAACCGCCTCCTGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS GCA 72 bp CCAAAGGCCACTTCACAGGCACTGTGTCTTGGTGGTTaGTACACAATCAGGAGAAAGGCTATGAAGGTGGCA +
Preference number: 6 (lower is better)
Translates to: PKATSQALCLGG*YTIRRKAMKVA
Trigger: TGCCACCTTCATAGCCTTTCTCCTGATTGTGTAGCAACCACCAAGACACAGTGCCTGTGAAGTGGCCTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550404.1
CDS CAA 72 bp TCGAAGCGTTCGGTGGTGACCACTTTGTCATCATGGTaGACTTCCATTAACTCCGCCCAGTTGTCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: SKRSVVTTLSSW*TSINSAQLSSP
Trigger: GGGAGAAGACAACTGGGCGGAGTTAATGGAAGTCAACCATGATGACAAAGTGGTCACCACCGAACGCTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261739.9
ENST00000547639.5
ENST00000550404.1
ENST00000553025.5
CDS CAA 72 bp TCTTGGGAAAGGTCGAAGCGTTCGGTGGTGACCACTTaGTCATCATGGTTGACTTCCATTAACTCCGCCCAG +
Preference number: 6 (lower is better)
Translates to: SWERSKRSVVTT*SSWLTSINSAQ
Trigger: CTGGGCGGAGTTAATGGAAGTCAACCATGATGACAAAGTGGTCACCACCGAACGCTTCGACCTTTCCCAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261739.9
ENST00000547639.5
ENST00000550404.1
ENST00000553025.5
CDS CAA 72 bp GCACCCTCCACCCTCCTCCCACAGTTATTAATCAATTaGCCTCACCCCAGGCATAGAAAGCCTCCAATCTTG +
Preference number: 6 (lower is better)
Translates to: APSTLLPQLLIN*PHPRHRKPPIL
Trigger: CAAGATTGGAGGCTTTCTATGCCTGGGGTGAGGCAAATTGATTAATAACTGTGGGAGGAGGGTGGAGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS CAA 72 bp ACCAAAGGCCACTTCACAGGCACTGTGTCTTGGTGGTaGCTACACAATCAGGAGAAAGGCTATGAAGGTGGC +
Preference number: 6 (lower is better)
Translates to: TKGHFTGTVSWW*LHNQEKGYEGG
Trigger: GCCACCTTCATAGCCTTTCTCCTGATTGTGTAGCAACCACCAAGACACAGTGCCTGTGAAGTGGCCTTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550404.1
CDS CAA 90 bp CGCTCCATTTCTTGGGAAAGGTCGAAGCGTTCGGTGGTGACCACTTaGTCATCATGGTTGACTTCCATTAACTCCGCCCAGTTGTCTTCT +
Preference number: 6 (lower is better)
Translates to: RSISWERSKRSVVTT*SSWLTSINSAQLSS
Trigger: AGAAGACAACTGGGCGGAGTTAATGGAAGTCAACCATGATGACAAAGTGGTCACCACCGAACGCTTCGACCTTTCCCAAGAAATGGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261739.9
ENST00000547639.5
ENST00000550404.1
ENST00000553025.5
CDS CCA 72 bp AGGTCGAAGCGTTCGGTGGTGACCACTTTGTCATCATaGTTGACTTCCATTAACTCCGCCCAGTTGTCTTCT +
Preference number: 6 (lower is better)
Translates to: RSKRSVVTTLSS*LTSINSAQLSS
Trigger: AGAAGACAACTGGGCGGAGTTAATGGAAGTCAACCATGATGACAAAGTGGTCACCACCGAACGCTTCGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261739.9
ENST00000547639.5
ENST00000550404.1
ENST00000553025.5
CDS CCA 72 bp CCTGGCTCCTGCTGGACTCCAGCAGACTTTGCTGGATaGCAAACTGCATTATCTCGTAATCTTCATCTTGCA +
Preference number: 6 (lower is better)
Translates to: PGSCWTPADFAG*QTALSRNLHLA
Trigger: TGCAAGATGAAGATTACGAGATAATGCAGTTTGCCATCCAGCAAAGTCTGCTGGAGTCCAGCAGGAGCCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000549826.1
ENST00000553251.5
CDS CCA 72 bp CACACCAAAGGCCACTTCACAGGCACTGTGTCTTGGTaGTTGCTACACAATCAGGAGAAAGGCTATGAAGGT +
Preference number: 6 (lower is better)
Translates to: HTKGHFTGTVSW*LLHNQEKGYEG
Trigger: ACCTTCATAGCCTTTCTCCTGATTGTGTAGCAACCACCAAGACACAGTGCCTGTGAAGTGGCCTTTGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550404.1
CDS CCA 72 bp CAGAAATGCCAAATGATGTTCACAAGTGAAGGCCTGTaGCACTCAGTGTCTGAGGTGGACGTGTTAACCAGC +
Preference number: 6 (lower is better)
Translates to: QKCQMMFTSEGL*HSVSEVDVLTS
Trigger: GCTGGTTAACACGTCCACCTCAGACACTGAGTGCCACAGGCCTTCACTTGTGAACATCATTTGGCATTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553251.5
CDS TCA 72 bp TGGGAAGCTGAATCAGCCTGGGTCCCTTCCACATTTTaGGATACAGATTCTTCGGCAGTGCTACAGCCATTA +
Preference number: 6 (lower is better)
Translates to: WEAESAWVPSTF*DTDSSAVLQPL
Trigger: TAATGGCTGTAGCACTGCCGAAGAATCTGTATCTCAAAATGTGGAAGGGACCCAGGCTGATTCAGCTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000261739.9
ENST00000547419.6
ENST00000549826.1
ENST00000553251.5
CDS CCA 72 bp TTTGGCACCACTTTTCCAGATGCGACAGACATCATTTaGGCATATTCTAGAAACCAAGGGCACCCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: FGTTFPDATDII*AYSRNQGHPAG
Trigger: ACCAGCTGGGTGCCCTTGGTTTCTAGAATATGCCCAAATGATGTCTGTCGCATCTGGAAAAGTGGTGCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000550404.1
ENST00000553025.5
CDS CCA 72 bp CCCCAGCTTAAGTTAGTGAAGGACACTTGGAAATCATaGTCCTATTGTCCACAGGAGGCGGTTAGCAATGAC +
Preference number: 6 (lower is better)
Translates to: PQLKLVKDTWKS*SYCPQEAVSND
Trigger: GTCATTGCTAACCGCCTCCTGTGGACAATAGGACCATGATTTCCAAGTGTCCTTCACTAACTTAAGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS CAA 90 bp ATGGCTTATGCACCCTCCACCCTCCTCCCACAGTTATTAATCAATTaGCCTCACCCCAGGCATAGAAAGCCTCCAATCTTGGCTTCTTTA +
Preference number: 6 (lower is better)
Translates to: MAYAPSTLLPQLLIN*PHPRHRKPPILASL
Trigger: TAAAGAAGCCAAGATTGGAGGCTTTCTATGCCTGGGGTGAGGCAAATTGATTAATAACTGTGGGAGGAGGGTGGAGGGTGCATAAGCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS CAA 90 bp TGGGAAAGGTCGAAGCGTTCGGTGGTGACCACTTTGTCATCATGGTaGACTTCCATTAACTCCGCCCAGTTGTCTTCTCCCTTAAATATA +
Preference number: 6 (lower is better)
Translates to: WERSKRSVVTTLSSW*TSINSAQLSSPLNI
Trigger: TATATTTAAGGGAGAAGACAACTGGGCGGAGTTAATGGAAGTCAACCATGATGACAAAGTGGTCACCACCGAACGCTTCGACCTTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000261739.9
ENST00000547639.5
ENST00000550404.1
ENST00000553025.5
CDS TCA 72 bp GTTTGTCTGGCTGATCCCTCCATTCGAAGCTGGTCCTaGAAGTTCCTGGCAAAGACAAATGTGATAGACATG +
Preference number: 6 (lower is better)
Translates to: VCLADPSIRSWS*KFLAKTNVIDM
Trigger: CATGTCTATCACATTTGTCTTTGCCAGGAACTTTCAGGACCAGCTTCGAATGGAGGGATCAGCCAGACAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553246.1
CDS TCA 72 bp ACCCTAAAATCTGGCAATAAAGGCAAGCGACCTGCATaGCAACCTGCCACGATCAAAGCCTTAATTGACAGC +
Preference number: 6 (lower is better)
Translates to: TLKSGNKGKRPA*QPATIKALIDS
Trigger: GCTGTCAATTAAGGCTTTGATCGTGGCAGGTTGTCATGCAGGTCGCTTGCCTTTATTGCCAGATTTTAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549826.1
CDS GCA 72 bp AAAGAAGTGACTGAAGATGACCAGCATCCAAGGGCTTaGCACAAGGTGGTAACCAGGTCAGAGCATTTATCT +
Preference number: 6 (lower is better)
Translates to: KEVTEDDQHPRA*HKVVTRSEHLS
Trigger: AGATAAATGCTCTGACCTGGTTACCACCTTGTGGCAAGCCCTTGGATGCTGGTCATCTTCAGTCACTTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS CCA 72 bp TTGCCACAAGGTGGTAACCAGGTCAGAGCATTTATCTaGGTCATCTTAACTGGGGACATGCATGTCAATGGT +
Preference number: 6 (lower is better)
Translates to: LPQGGNQVRAFI*VILTGDMHVNG
Trigger: ACCATTGACATGCATGTCCCCAGTTAAGATGACCCAGATAAATGCTCTGACCTGGTTACCACCTTGTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS CAA 90 bp CAGCTCATGTTTTCAAATCCCAGCAATGTGATATCGACGCGCAGTTaGGCACCACTTTTCCAGATGCGACAGACATCATTTGGGCATATT +
Preference number: 6 (lower is better)
Translates to: QLMFSNPSNVISTRS*APLFQMRQTSFGHI
Trigger: AATATGCCCAAATGATGTCTGTCGCATCTGGAAAAGTGGTGCCAAACTGCGCGTCGATATCACATTGCTGGGATTTGAAAACATGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000550404.1
ENST00000553025.5
CDS TCA 72 bp AAAGTTCCTGAATCAGCCTGGGTCCCTTCCACATTTTaGGATACAGATTCTTCGGCAGTGCTACAGCCATTA +
Preference number: 6 (lower is better)
Translates to: KVPESAWVPSTF*DTDSSAVLQPL
Trigger: TAATGGCTGTAGCACTGCCGAAGAATCTGTATCTCAAAATGTGGAAGGGACCCAGGCTGATTCAGGAACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551491.1
CDS CAA 72 bp GCCTCCAATCTTGGCTTCTTTACAAAACTGCCAGCATaGAGGACAAAGGTGGTGACATTTATTGGACAGCAG +
Preference number: 6 (lower is better)
Translates to: ASNLGFFTKLPA*RTKVVTFIGQQ
Trigger: CTGCTGTCCAATAAATGTCACCACCTTTGTCCTCAATGCTGGCAGTTTTGTAAAGAAGCCAAGATTGGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS CAA 72 bp TTTTCAAATCCCAGCAATGTGATATCGACGCGCAGTTaGGCACCACTTTTCCAGATGCGACAGACATCATTT +
Preference number: 6 (lower is better)
Translates to: FSNPSNVISTRS*APLFQMRQTSF
Trigger: AAATGATGTCTGTCGCATCTGGAAAAGTGGTGCCAAACTGCGCGTCGATATCACATTGCTGGGATTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000550404.1
ENST00000553025.5
CDS GCA 72 bp TGTGTAAACCTTTGCTTCGTAACCATTAACAACTTCTaGTTTATCTGTCCTCCAGCCCCAGAATCCGGATTT +
Preference number: 6 (lower is better)
Translates to: CVNLCFVTINNF*FICPPAPESGF
Trigger: AAATCCGGATTCTGGGGCTGGAGGACAGATAAAGCAGAAGTTGTTAATGGTTACGAAGCAAAGGTTTACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000546476.1
ENST00000547639.5
CDS GCA 72 bp CAGAGAGAGGGGAAACTCTTCACACATCCACAACATTaGTTTAAACCTGCAGAATTCAACCAAGAAAAGACT +
Preference number: 6 (lower is better)
Translates to: QREGKLFTHPQH*FKPAEFNQEKT
Trigger: AGTCTTTTCTTGGTTGAATTCTGCAGGTTTAAAGCAATGTTGTGGATGTGTGAAGAGTTTCCCCTCTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000549826.1
CDS TCA 72 bp TTTCCTCCTCGGTCAGATGTTCTGTGCGTATTTTGGTaGTCACATTCACATTGTTTACTGTGTAAACCTTTG +
Preference number: 6 (lower is better)
Translates to: FPPRSDVLCVFW*SHSHCLLCKPL
Trigger: CAAAGGTTTACACAGTAAACAATGTGAATGTGATCACCAAAATACGCACAGAACATCTGACCGAGGAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000546476.1
ENST00000547639.5
CDS TCA 72 bp TCTAGCTTTGATAGTGGAAAGGTAATTTCATTTTTCTaGCCCGCAGGGACATCCACTGTACCAAGTTCATAT +
Preference number: 6 (lower is better)
Translates to: SSFDSGKVISFF*PAGTSTVPSSY
Trigger: ATATGAACTTGGTACAGTGGATGTCCCTGCGGGTCAGAAAAATGAAATTACCTTTCCACTATCAAAGCTAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553251.5
CDS CAA 90 bp CAGACTTTGCTGGATGGCAAACTGCATTATCTCGTAATCTTCATCTaGCAAATGCACATTTCTGCCATTGTCTTGAACATAGTAAGATTC +
Preference number: 6 (lower is better)
Translates to: QTLLDGKLHYLVIFI*QMHISAIVLNIVRF
Trigger: GAATCTTACTATGTTCAAGACAATGGCAGAAATGTGCATTTGCAAGATGAAGATTACGAGATAATGCAGTTTGCCATCCAGCAAAGTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000261739.9
ENST00000549826.1
ENST00000553251.5
CDS TCA 72 bp CCAGCCCCAGAATCCGGATTTAGTTCTGATAAAAAGTaGACACCACAAATTTCTACATGTACAATATGCCAT +
Preference number: 6 (lower is better)
Translates to: PAPESGFSSDKK*TPQISTCTICH
Trigger: ATGGCATATTGTACATGTAGAAATTTGTGGTGTTCACTTTTTATCAGAACTAAATCCGGATTCTGGGGCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546476.1
CDS GCA 72 bp AGGGAAAAATTCAAACTGCAACCACAGTGTATATACTaGAGGCCAAAAATTCATCAGGGCAGGGTATTAATT +
Preference number: 6 (lower is better)
Translates to: REKFKLQPQCIY*RPKIHQGRVLI
Trigger: AATTAATACCCTGCCCTGATGAATTTTTGGCCTGCAGTATATACACTGTGGTTGCAGTTTGAATTTTTCCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550404.1
CDS CAA 72 bp CAGCTAAAGACCGGGAAGTTCTATTCACTAACTTTTTaGCATGGAACAAGAAAATCTATGAGGATATCACCA +
Preference number: 6 (lower is better)
Translates to: QLKTGKFYSLTF*HGTRKSMRISP
Trigger: TGGTGATATCCTCATAGATTTTCTTGTTCCATGCAAAAAAGTTAGTGAATAGAACTTCCCGGTCTTTAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553251.5