RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ANAPC7 (Homo sapiens)

Ensembl gene IDs: ENSG00000196510

Ensembl transcript IDs: ENST00000450008.3, ENST00000452721.2, ENST00000455511.8, ENST00000455511.9, ENST00000464697.1, ENST00000471602.6, ENST00000481473.5, ENST00000486321.1, ENST00000546720.5, ENST00000547199.3, ENST00000548234.1, ENST00000552087.1, ENST00000552170.2

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCCTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCACGGAAGTaGTCAGAGCAGGGCAGGCCACTGCGGCCATGGAGCTGCCGCCCC +
Preference number: 1 (lower is better)
Translates to: VLLRAGSYGSFSPRK*SEQGRPLRPWSCRP
Trigger: GGGGCGGCAGCTCCATGGCCGCAGTGGCCTGCCCTGCTCTGAGCACTTCCGTGGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR CCA 90 bp CAACATGTGCGTGGGTCTCGGGGCACTCCCTCAGTCCTCCCTGGCTaGAGCAGGGGAGGATGGAGATACATGGAAGGTTGGTCAGGCTCT +
Preference number: 1 (lower is better)
Translates to: QHVRGSRGTPSVLPG*SRGGWRYMEGWSGS
Trigger: AGAGCCTGACCAACCTTCCATGTATCTCCATCCTCCCCTGCTCCAGCCAGGGAGGACTGAGGGAGTGCCCCGAGACCCACGCACATGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR TCA 90 bp AACTCCCAGCCCCAGAGCTCAGGGTGTGATACTCAGGCTGACCAGTaGCAGACTGCTGGAACCAGACCCCAATCTCACAGCTGCAGCAAA +
Preference number: 1 (lower is better)
Translates to: NSQPQSSGCDTQADQ*QTAGTRPQSHSCSK
Trigger: TTTGCTGCAGCTGTGAGATTGGGGTCTGGTTCCAGCAGTCTGTCACTGGTCAGCCTGAGTATCACACCCTGAGCTCTGGGGCTGGGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR TCA 90 bp GGGCAGAGACCCCTGCTGCAATCACATGCTGAATCATTGTCCTTCTaGGAGCAGGCTCCTACGGTTCCTTCAGTCCACGGAAGTGCTCAG +
Preference number: 1 (lower is better)
Translates to: GQRPLLQSHAESLSF*EQAPTVPSVHGSAQ
Trigger: CTGAGCACTTCCGTGGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAGGACAATGATTCAGCATGTGATTGCAGCAGGGGTCTCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR GCA 90 bp GAAGTCACGACTAGGAATTGGGAGCGAGGGGGCAGAGACCCCTGCTaGAATCACATGCTGAATCATTGTCCTTCTGAGAGCAGGCTCCTA +
Preference number: 1 (lower is better)
Translates to: EVTTRNWERGGRDPC*NHMLNHCPSESRLL
Trigger: TAGGAGCCTGCTCTCAGAAGGACAATGATTCAGCATGTGATTGCAGCAGGGGTCTCTGCCCCCTCGCTCCCAATTCCTAGTCGTGACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR GCA 90 bp ACAATGACTTCTGGGAACAGGAAGCTCCCTAGGGCCAGATCGTGCTaGCATCCAACTTGGGAGATGACATTATCGTGCTGGGATGGTGGG +
Preference number: 1 (lower is better)
Translates to: TMTSGNRKLPRARSC*HPTWEMTLSCWDGG
Trigger: CCCACCATCCCAGCACGATAATGTCATCTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAGGGAGCTTCCTGTTCCCAGAAGTCATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR TCA 90 bp GGAAGCTCCCTAGGGCCAGATCGTGCTGCCATCCAACTTGGGAGATaGCATTATCGTGCTGGGATGGTGGGTAACTCCTTCAAACCAATC +
Preference number: 1 (lower is better)
Translates to: GSSLGPDRAAIQLGR*HYRAGMVGNSFKPI
Trigger: GATTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAATGTCATCTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAGGGAGCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR TCA 90 bp GACCCCAATCTCACAGCTGCAGCAAAAGAGCCAGGCAGACGCAGCTaGAATCTGGCCAAAGACTCTCAGGCTCCAGGGAAATTAACCTAC +
Preference number: 1 (lower is better)
Translates to: DPNLTAAAKEPGRRS*NLAKDSQAPGKLTY
Trigger: GTAGGTTAATTTCCCTGGAGCCTGAGAGTCTTTGGCCAGATTTCAGCTGCGTCTGCCTGGCTCTTTTGCTGCAGCTGTGAGATTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR GCA 90 bp AATGAAGTCACGACTAGGAATTGGGAGCGAGGGGGCAGAGACCCCTaGTGCAATCACATGCTGAATCATTGTCCTTCTGAGAGCAGGCTC +
Preference number: 1 (lower is better)
Translates to: NEVTTRNWERGGRDP*CNHMLNHCPSESRL
Trigger: GAGCCTGCTCTCAGAAGGACAATGATTCAGCATGTGATTGCAGCAGGGGTCTCTGCCCCCTCGCTCCCAATTCCTAGTCGTGACTTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR GCA 90 bp AGGACAATGACTTCTGGGAACAGGAAGCTCCCTAGGGCCAGATCGTaGTGCCATCCAACTTGGGAGATGACATTATCGTGCTGGGATGGT +
Preference number: 1 (lower is better)
Translates to: RTMTSGNRKLPRARS*CHPTWEMTLSCWDG
Trigger: ACCATCCCAGCACGATAATGTCATCTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAGGGAGCTTCCTGTTCCCAGAAGTCATTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR GCA 90 bp AAACCAGTTTTATTAGGGAACTGCCCCAGGTGCACCTCTGGTTCATaGTCTTGTCACACCTGTTTCTCAGATCAGCCCAGGCTCAGAGGC +
Preference number: 1 (lower is better)
Translates to: KPVLLGNCPRCTSGS*SCHTCFSDQPRLRG
Trigger: GCCTCTGAGCCTGGGCTGATCTGAGAAACAGGTGTGACAAGAGCATGAACCAGAGGTGCACCTGGGGCAGTTCCCTAATAAAACTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR GCA 90 bp CTGGCCAAAGACTCTCAGGCTCCAGGGAAATTAACCTACCCAATATaGAAACAGATGAACCAGCTCAGGGTTCCTGAGCTTTCCAACCCT +
Preference number: 1 (lower is better)
Translates to: LAKDSQAPGKLTYPI*KQMNQLRVPELSNP
Trigger: AGGGTTGGAAAGCTCAGGAACCCTGAGCTGGTTCATCTGTTTGCATATTGGGTAGGTTAATTTCCCTGGAGCCTGAGAGTCTTTGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR CCA 90 bp ACTGTACAAACCAGTTTTATTAGGGAACTGCCCCAGGTGCACCTCTaGTTCATGCTCTTGTCACACCTGTTTCTCAGATCAGCCCAGGCT +
Preference number: 1 (lower is better)
Translates to: TVQTSFIRELPQVHL*FMLLSHLFLRSAQA
Trigger: AGCCTGGGCTGATCTGAGAAACAGGTGTGACAAGAGCATGAACCAGAGGTGCACCTGGGGCAGTTCCCTAATAAAACTGGTTTGTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR CCA 90 bp ATCGTGCTGCCATCCAACTTGGGAGATGACATTATCGTGCTGGGATaGTGGGTAACTCCTTCAAACCAATCCATGTCACAGAACACTGTC +
Preference number: 1 (lower is better)
Translates to: IVLPSNLGDDIIVLG*WVTPSNQSMSQNTV
Trigger: GACAGTGTTCTGTGACATGGATTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAATGTCATCTCCCAAGTTGGATGGCAGCACGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR CCA 90 bp TACGCTTTGATCCACACAGAGAGCCAGTCCAAGTTAGGCACGGTTTaGATCACATTCATTGTCATGGATGCCACCTCTGCCCCTTTTACA +
Preference number: 1 (lower is better)
Translates to: YALIHTESQSKLGTV*ITFIVMDATSAPFT
Trigger: TGTAAAAGGGGCAGAGGTGGCATCCATGACAATGAATGTGATCCAAACCGTGCCTAACTTGGACTGGCTCTCTGTGTGGATCAAAGCGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
3UTR CCA 90 bp GTGCTGCCATCCAACTTGGGAGATGACATTATCGTGCTGGGATGGTaGGTAACTCCTTCAAACCAATCCATGTCACAGAACACTGTCTAT +
Preference number: 1 (lower is better)
Translates to: VLPSNLGDDIIVLGW*VTPSNQSMSQNTVY
Trigger: ATAGACAGTGTTCTGTGACATGGATTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAATGTCATCTCCCAAGTTGGATGGCAGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR GCA 90 bp TCTAGTGAACAGATGGTACTGATTGCTCTTGAGTTGTCACCAGTGTaGACAAAAGCATACGCTTTGATCCACACAGAGAGCCAGTCCAAG +
Preference number: 1 (lower is better)
Translates to: SSEQMVLIALELSPV*TKAYALIHTESQSK
Trigger: CTTGGACTGGCTCTCTGTGTGGATCAAAGCGTATGCTTTTGTGCACACTGGTGACAACTCAAGAGCAATCAGTACCATCTGTTCACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
3UTR CCA 90 bp TCCAACCCTCCTGGCTCCCAACACCAGGGGAAGAAAGTCTATTTCTaGCAAATAATTCTGGGGCTGAATCAATGCATTGCGAATAAGACA +
Preference number: 1 (lower is better)
Translates to: SNPPGSQHQGKKVYF*QIILGLNQCIANKT
Trigger: TGTCTTATTCGCAATGCATTGATTCAGCCCCAGAATTATTTGCCAGAAATAGACTTTCTTCCCCTGGTGTTGGGAGCCAGGAGGGTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR-3UTR GCA 90 bp CCCAGAAGCCCCAACATGTGCGTGGGTCTCGGGGCACTCCCTCAGTCCTCCCTGGGCAGAGACCCCTGCTaGAATCACATGCTGAATCAT +
Preference number: 2 (lower is better)
Translates to: PRSPNMCVGLGALPQSSLGRDPC*NHMLNH
Trigger: ATGATTCAGCATGTGATTGCAGCAGGGGTCTCTGCC...CAGGGAGGACTGAGGGAGTGCCCCGAGACCCACGCACATGTTGGGGCTTCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR-3UTR GCA 90 bp CTTCTGGGAACAGGAAGCTCCCTAGGGCCAGATCGTGCTGCCATCCAACTTGGGGGGGGCAGAGACCCCTaGTGCAATCACATGCTGAAT +
Preference number: 2 (lower is better)
Translates to: LLGTGSSLGPDRAAIQLGGGRDP*CNHMLN
Trigger: ATTCAGCATGTGATTGCAGCAGGGGTCTCTGCCCCC...CCCAAGTTGGATGGCAGCACGATCTGGCCCTAGGGAGCTTCCTGTTCCCAGAAG
58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR-3UTR GCA 90 bp AGCCATCGCAACTTAAGGCACAAGGGAGAGGGTGTGGGAAGAAACTCCCAGCCCGGGAACTGCCCCAGGTaGACCTCTGGTTCATGCTCT +
Preference number: 2 (lower is better)
Translates to: SHRNLRHKGEGVGRNSQPGNCPR*TSGSCS
Trigger: AGAGCATGAACCAGAGGTGCACCTGGGGCAGTTCCC...GGGCTGGGAGTTTCTTCCCACACCCTCTCCCTTGTGCCTTAAGTTGCGATGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR-3UTR CCA 90 bp CTCCCTAGGGCCAGATCGTGCTGCCATCCAACTTGGGAGATGACATTATCGTGCGTCACGACTAGGAATTaGGAGCGAGGGGGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: LPRARSCCHPTWEMTLSCVTTRN*ERGGRD
Trigger: GTCTCTGCCCCCTCGCTCCCAATTCCTAGTCGTGAC...GCACGATAATGTCATCTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR-3UTR TCA 90 bp GAAAGGGACAACAAGCCTAGAATGGCATCAAGGGCTAATGGGCACTGCCTCAGCCCTCCTTATAGCTGGTaGCTGAAGGGCGCTCCTGAC +
Preference number: 2 (lower is better)
Translates to: ERDNKPRMASRANGHCLSPPYSW*LKGAPD
Trigger: GTCAGGAGCGCCCTTCAGTCACCAGCTATAAGGAGG...GCTGAGGCAGTGCCCATTAGCCCTTGATGCCATTCTAGGCTTGTTGTCCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552170.2
3UTR-3UTR TCA 90 bp CCAGTCCAAGTTAGGCACGGTTTGGATCACATTCATTGTCATGGATGCCACCTCACTGAAGGGCGCTCCTaGCCAGCCTTCTTGTACAGG +
Preference number: 2 (lower is better)
Translates to: PVQVRHGLDHIHCHGCHLTEGRS*PAFLYR
Trigger: CCTGTACAAGAAGGCTGGTCAGGAGCGCCCTTCAGT...GAGGTGGCATCCATGACAATGAATGTGATCCAAACCGTGCCTAACTTGGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552170.2
3UTR-3UTR TCA 90 bp GAAACTCCCAGCCCCAGAGCTCAGGGTGTGATACTCAGGCTGACCAGTGACAGAGCTGCAATCACATGCTaGATCATTGTCCTTCTGAGA +
Preference number: 2 (lower is better)
Translates to: ETPSPRAQGVILRLTSDRAAITC*IIVLLR
Trigger: TCTCAGAAGGACAATGATTCAGCATGTGATTGCAGC...TCTGTCACTGGTCAGCCTGAGTATCACACCCTGAGCTCTGGGGCTGGGAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR-3UTR GCA 90 bp GGAGATGACATTATCGTGCTGGGATGGTGGGTAACTCCTTCAAACCAATCCATGTTCAGTCCACGGAAGTaGTCAGAGCAGGGCAGGCCA +
Preference number: 2 (lower is better)
Translates to: GDDIIVLGWWVTPSNQSMFSPRK*SEQGRP
Trigger: TGGCCTGCCCTGCTCTGAGCACTTCCGTGGACTGAA...CATGGATTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAATGTCATCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR-3UTR GCA 90 bp AACTTGGGAGATGACATTATCGTGCTGGGATGGTGGGTAACTCCTTCAAACCAAAGAAGCCCCAACATGTaGGTGGGTCTCGGGGCACTC +
Preference number: 2 (lower is better)
Translates to: NLGDDIIVLGWWVTPSNQRSPNM*VGLGAL
Trigger: GAGTGCCCCGAGACCCACGCACATGTTGGGGCTTCT...TTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAATGTCATCTCCCAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR CAA 90 bp AGTTTTATTAGGGAACTGCCCCAGGTGCACCTCTGGTTCATGCTCTaGTCACACCTGTTTCTCAGATCAGCCCAGGCTCAGAGGCAAGTT +
Preference number: 2 (lower is better)
Translates to: SFIRELPQVHLWFML*SHLFLRSAQAQRQV
Trigger: AACTTGCCTCTGAGCCTGGGCTGATCTGAGAAACAGGTGTGACAAGAGCATGAACCAGAGGTGCACCTGGGGCAGTTCCCTAATAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR-3UTR TCA 90 bp AGGGACAACAAGCCTAGAATGGCATCAAGGGCTAATGGGCACTGCCTCAGCACCGGGAGTTCTTTGTCTTaGAGGGATCCCATCAAGTAT +
Preference number: 2 (lower is better)
Translates to: RDNKPRMASRANGHCLSTGSSLS*RDPIKY
Trigger: ATACTTGATGGGATCCCTTCAAGACAAAGAACTCCC...GGTGCTGAGGCAGTGCCCATTAGCCCTTGATGCCATTCTAGGCTTGTTGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552170.2
3UTR-3UTR CCA 90 bp AACTTGGGAGATGACATTATCGTGCTGGGATGGTGGGTAACTCCTTCAAACCAAGTCACGACTAGGAATTaGGAGCGAGGGGGCAGAGAC +
Preference number: 2 (lower is better)
Translates to: NLGDDIIVLGWWVTPSNQVTTRN*ERGGRD
Trigger: GTCTCTGCCCCCTCGCTCCCAATTCCTAGTCGTGAC...TTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAATGTCATCTCCCAAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR-3UTR CCA 90 bp GGTTCATGCTCTTGTCACACCTGTTTCTCAGATCAGCCCAGGCTCAGAGGCAAGATCGTGCTGGGATGGTaGGTAACTCCTTCAAACCAA +
Preference number: 2 (lower is better)
Translates to: GSCSCHTCFSDQPRLRGKIVLGW*VTPSNQ
Trigger: TTGGTTTGAAGGAGTTACCCACCATCCCAGCACGAT...CTTGCCTCTGAGCCTGGGCTGATCTGAGAAACAGGTGTGACAAGAGCATGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR-3UTR CCA 90 bp AGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACCTCTCTACCCTCCTCAGTaGCCTTCCCCCAAGGGAGGC +
Preference number: 2 (lower is better)
Translates to: SNLPKITGGEGSIQNFRPLYPPQ*PSPKGG
Trigger: GCCTCCCTTGGGGGAAGGCCACTGAGGAGGGTAGAG...AGGTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450008.3
3UTR CAA 90 bp ATACGCTTTGATCCACACAGAGAGCCAGTCCAAGTTAGGCACGGTTaGGATCACATTCATTGTCATGGATGCCACCTCTGCCCCTTTTAC +
Preference number: 2 (lower is better)
Translates to: IRFDPHREPVQVRHG*DHIHCHGCHLCPFY
Trigger: GTAAAAGGGGCAGAGGTGGCATCCATGACAATGAATGTGATCCAAACCGTGCCTAACTTGGACTGGCTCTCTGTGTGGATCAAAGCGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
3UTR CAA 90 bp CTGATTGCTCTTGAGTTGTCACCAGTGTGCACAAAAGCATACGCTTaGATCCACACAGAGAGCCAGTCCAAGTTAGGCACGGTTTGGATC +
Preference number: 2 (lower is better)
Translates to: LIALELSPVCTKAYA*IHTESQSKLGTVWI
Trigger: GATCCAAACCGTGCCTAACTTGGACTGGCTCTCTGTGTGGATCAAAGCGTATGCTTTTGTGCACACTGGTGACAACTCAAGAGCAATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
3UTR-3UTR CCA 90 bp CCAGTTTTATTAGGGAACTGCCCCAGGTGCACCTCTGGTTCATGCTCTTGTCACTTTACTAGGGACATCTaGATAGCCCAGGACAATGAC +
Preference number: 2 (lower is better)
Translates to: PVLLGNCPRCTSGSCSCHFTRDI*IAQDND
Trigger: GTCATTGTCCTGGGCTATCCAGATGTCCCTAGTAAA...GTGACAAGAGCATGAACCAGAGGTGCACCTGGGGCAGTTCCCTAATAAAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR-3UTR TCA 90 bp AACTTGGGAGATGACATTATCGTGCTGGGATGGTGGGTAACTCCTTCAAACCAAGAATCATTGTCCTTCTaGGAGCAGGCTCCTACGGTT +
Preference number: 2 (lower is better)
Translates to: NLGDDIIVLGWWVTPSNQESLSF*EQAPTV
Trigger: AACCGTAGGAGCCTGCTCTCAGAAGGACAATGATTC...TTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAATGTCATCTCCCAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR-3UTR GCA 90 bp CTCCGATTAATTGTATACTCAGAGCCATCGCAACTTAAGGCACAAGGGAGAGGGTGCACCTCTGGTTCATaGTCTTGTCACACCTGTTTC +
Preference number: 2 (lower is better)
Translates to: LRLIVYSEPSQLKAQGRGCTSGS*SCHTCF
Trigger: GAAACAGGTGTGACAAGAGCATGAACCAGAGGTGCA...CCCTCTCCCTTGTGCCTTAAGTTGCGATGGCTCTGAGTATACAATTAATCGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR-3UTR CCA 90 bp CTGGGATGGTGGGTAACTCCTTCAAACCAATCCATGTCACAGAACACTGTCTATGAGGATGGAGATACATaGAAGGTTGGTCAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: LGWWVTPSNQSMSQNTVYEDGDT*KVGQAL
Trigger: CAGAGCCTGACCAACCTTCCATGTATCTCCATCCTC...ATAGACAGTGTTCTGTGACATGGATTGGTTTGAAGGAGTTACCCACCATCCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR-3UTR CCA 90 bp ATTATCGTGCTGGGATGGTGGGTAACTCCTTCAAACCAATCCATGTCACAGAACGAGGATGGAGATACATaGAAGGTTGGTCAGGCTCTG +
Preference number: 2 (lower is better)
Translates to: IIVLGWWVTPSNQSMSQNEDGDT*KVGQAL
Trigger: CAGAGCCTGACCAACCTTCCATGTATCTCCATCCTC...GTTCTGTGACATGGATTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR-3UTR TCA 90 bp ATTATCGTGCTGGGATGGTGGGTAACTCCTTCAAACCAATCCATGTCACAGAACGCTGCAATCACATGCTaGATCATTGTCCTTCTGAGA +
Preference number: 2 (lower is better)
Translates to: IIVLGWWVTPSNQSMSQNAAITC*IIVLLR
Trigger: TCTCAGAAGGACAATGATTCAGCATGTGATTGCAGC...GTTCTGTGACATGGATTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR-3UTR GCA 90 bp GGTAACTCCTTCAAACCAATCCATGTCACAGAACACTGTCTATTCCTTGAGCTTGGCAGAGACCCCTGCTaGAATCACATGCTGAATCAT +
Preference number: 2 (lower is better)
Translates to: GNSFKPIHVTEHCLFLELGRDPC*NHMLNH
Trigger: ATGATTCAGCATGTGATTGCAGCAGGGGTCTCTGCC...AAGCTCAAGGAATAGACAGTGTTCTGTGACATGGATTGGTTTGAAGGAGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR CAA 90 bp ACTGTTCTGCAAAATAGCAACTGTCAGCTTAAGGCATTACTAACATaGCAGAAGGAAGCAAGATTTACTAGGGACATCTGGATAGCCCAG +
Preference number: 2 (lower is better)
Translates to: TVLQNSNCQLKALLT*QKEARFTRDIWIAQ
Trigger: CTGGGCTATCCAGATGTCCCTAGTAAATCTTGCTTCCTTCTGCAATGTTAGTAATGCCTTAAGCTGACAGTTGCTATTTTGCAGAACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR-3UTR TCA 90 bp AGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACCTGGTGTGGGATGGTTATaGGTGAAACAGTTCTCTAAT +
Preference number: 2 (lower is better)
Translates to: SNLPKITGGEGSIQNFRPGVGWL*VKQFSN
Trigger: ATTAGAGAACTGTTTCACTCATAACCATCCCACACC...AGGTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
3UTR-3UTR TCA 90 bp AGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAATGGGATGGTTATGAGTaGAACAGTTCTCTAATGTTG +
Preference number: 2 (lower is better)
Translates to: RKCVSNLPKITGGEGSIQWDGYE*NSSLML
Trigger: CAACATTAGAGAACTGTTTCACTCATAACCATCCCA...TTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAACACATTTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
3UTR TCA 72 bp CCCCAGAGCTCAGGGTGTGATACTCAGGCTGACCAGTaGCAGACTGCTGGAACCAGACCCCAATCTCACAGC +
Preference number: 3 (lower is better)
Translates to: PQSSGCDTQADQ*QTAGTRPQSHS
Trigger: GCTGTGAGATTGGGGTCTGGTTCCAGCAGTCTGTCACTGGTCAGCCTGAGTATCACACCCTGAGCTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR TCA 72 bp CTCACAGCTGCAGCAAAAGAGCCAGGCAGACGCAGCTaGAATCTGGCCAAAGACTCTCAGGCTCCAGGGAAA +
Preference number: 3 (lower is better)
Translates to: LTAAAKEPGRRS*NLAKDSQAPGK
Trigger: TTTCCCTGGAGCCTGAGAGTCTTTGGCCAGATTTCAGCTGCGTCTGCCTGGCTCTTTTGCTGCAGCTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR GCA 72 bp TCTGGGAACAGGAAGCTCCCTAGGGCCAGATCGTGCTaGCATCCAACTTGGGAGATGACATTATCGTGCTGG +
Preference number: 3 (lower is better)
Translates to: SGNRKLPRARSC*HPTWEMTLSCW
Trigger: CCAGCACGATAATGTCATCTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAGGGAGCTTCCTGTTCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR-3UTR CAA 90 bp AGCCATCGCAACTTAAGGCACAAGGGAGAGGGTGTGGGAAGAAACTCCCAGCCCGTGCTGCCATCCAACTaGGGAGATGACATTATCGTG +
Preference number: 3 (lower is better)
Translates to: SHRNLRHKGEGVGRNSQPVLPSN*GDDIIV
Trigger: CACGATAATGTCATCTCCCAAGTTGGATGGCAGCAC...GGGCTGGGAGTTTCTTCCCACACCCTCTCCCTTGTGCCTTAAGTTGCGATGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR TCA 72 bp CTAGGGCCAGATCGTGCTGCCATCCAACTTGGGAGATaGCATTATCGTGCTGGGATGGTGGGTAACTCCTTC +
Preference number: 3 (lower is better)
Translates to: LGPDRAAIQLGR*HYRAGMVGNSF
Trigger: GAAGGAGTTACCCACCATCCCAGCACGATAATGTCATCTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR GCA 72 bp ACTAGGAATTGGGAGCGAGGGGGCAGAGACCCCTGCTaGAATCACATGCTGAATCATTGTCCTTCTGAGAGC +
Preference number: 3 (lower is better)
Translates to: TRNWERGGRDPC*NHMLNHCPSES
Trigger: GCTCTCAGAAGGACAATGATTCAGCATGTGATTGCAGCAGGGGTCTCTGCCCCCTCGCTCCCAATTCCTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR GCA 72 bp ACGACTAGGAATTGGGAGCGAGGGGGCAGAGACCCCTaGTGCAATCACATGCTGAATCATTGTCCTTCTGAG +
Preference number: 3 (lower is better)
Translates to: TTRNWERGGRDP*CNHMLNHCPSE
Trigger: CTCAGAAGGACAATGATTCAGCATGTGATTGCAGCAGGGGTCTCTGCCCCCTCGCTCCCAATTCCTAGTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR GCA 72 bp ACTTCTGGGAACAGGAAGCTCCCTAGGGCCAGATCGTaGTGCCATCCAACTTGGGAGATGACATTATCGTGC +
Preference number: 3 (lower is better)
Translates to: TSGNRKLPRARS*CHPTWEMTLSC
Trigger: GCACGATAATGTCATCTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAGGGAGCTTCCTGTTCCCAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR GCA 72 bp TTATTAGGGAACTGCCCCAGGTGCACCTCTGGTTCATaGTCTTGTCACACCTGTTTCTCAGATCAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: LLGNCPRCTSGS*SCHTCFSDQPR
Trigger: CCTGGGCTGATCTGAGAAACAGGTGTGACAAGAGCATGAACCAGAGGTGCACCTGGGGCAGTTCCCTAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR CCA 72 bp ATCCACACAGAGAGCCAGTCCAAGTTAGGCACGGTTTaGATCACATTCATTGTCATGGATGCCACCTCTGCC +
Preference number: 3 (lower is better)
Translates to: IHTESQSKLGTV*ITFIVMDATSA
Trigger: GGCAGAGGTGGCATCCATGACAATGAATGTGATCCAAACCGTGCCTAACTTGGACTGGCTCTCTGTGTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552170.2
3UTR GCA 72 bp CTGTACAAACCAGTTTTATTAGGGAACTGCCCCAGGTaGACCTCTGGTTCATGCTCTTGTCACACCTGTTTC +
Preference number: 3 (lower is better)
Translates to: LYKPVLLGNCPR*TSGSCSCHTCF
Trigger: GAAACAGGTGTGACAAGAGCATGAACCAGAGGTGCACCTGGGGCAGTTCCCTAATAAAACTGGTTTGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR GCA 72 bp GACTCTCAGGCTCCAGGGAAATTAACCTACCCAATATaGAAACAGATGAACCAGCTCAGGGTTCCTGAGCTT +
Preference number: 3 (lower is better)
Translates to: DSQAPGKLTYPI*KQMNQLRVPEL
Trigger: AAGCTCAGGAACCCTGAGCTGGTTCATCTGTTTGCATATTGGGTAGGTTAATTTCCCTGGAGCCTGAGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR CCA 72 bp CCATCCAACTTGGGAGATGACATTATCGTGCTGGGATaGTGGGTAACTCCTTCAAACCAATCCATGTCACAG +
Preference number: 3 (lower is better)
Translates to: PSNLGDDIIVLG*WVTPSNQSMSQ
Trigger: CTGTGACATGGATTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAATGTCATCTCCCAAGTTGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR CCA 72 bp ACCAGTTTTATTAGGGAACTGCCCCAGGTGCACCTCTaGTTCATGCTCTTGTCACACCTGTTTCTCAGATCA +
Preference number: 3 (lower is better)
Translates to: TSFIRELPQVHL*FMLLSHLFLRS
Trigger: TGATCTGAGAAACAGGTGTGACAAGAGCATGAACCAGAGGTGCACCTGGGGCAGTTCCCTAATAAAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR CCA 72 bp CCTGGCTCCCAACACCAGGGGAAGAAAGTCTATTTCTaGCAAATAATTCTGGGGCTGAATCAATGCATTGCG +
Preference number: 3 (lower is better)
Translates to: PGSQHQGKKVYF*QIILGLNQCIA
Trigger: CGCAATGCATTGATTCAGCCCCAGAATTATTTGCCAGAAATAGACTTTCTTCCCCTGGTGTTGGGAGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR-3UTR CAA 90 bp CCACCTCTGCCCCTTTTACAGAAAGGGACAACAAGCCTAGAATGGCATCAAGGGCCTTCTTGTACAGGTTaGCCAGCATCATGTTTATTT +
Preference number: 3 (lower is better)
Translates to: PPLPLLQKGTTSLEWHQGPSCTG*PASCLF
Trigger: AAATAAACATGATGCTGGCAAACCTGTACAAGAAGG...CCCTTGATGCCATTCTAGGCTTGTTGTCCCTTTCTGTAAAAGGGGCAGAGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
3UTR GCA 72 bp GTTAGGCACGGTTTGGATCACATTCATTGTCATGGATaGCACCTCTGCCCCTTTTACAGAAAGGGACAACAA +
Preference number: 3 (lower is better)
Translates to: VRHGLDHIHCHG*HLCPFYRKGQQ
Trigger: TTGTTGTCCCTTTCTGTAAAAGGGGCAGAGGTGGCATCCATGACAATGAATGTGATCCAAACCGTGCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
3UTR GCA 72 bp CAGATGGTACTGATTGCTCTTGAGTTGTCACCAGTGTaGACAAAAGCATACGCTTTGATCCACACAGAGAGC +
Preference number: 3 (lower is better)
Translates to: QMVLIALELSPV*TKAYALIHTES
Trigger: GCTCTCTGTGTGGATCAAAGCGTATGCTTTTGTGCACACTGGTGACAACTCAAGAGCAATCAGTACCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
3UTR CCA 72 bp TCCAACTTGGGAGATGACATTATCGTGCTGGGATGGTaGGTAACTCCTTCAAACCAATCCATGTCACAGAAC +
Preference number: 3 (lower is better)
Translates to: SNLGDDIIVLGW*VTPSNQSMSQN
Trigger: GTTCTGTGACATGGATTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAATGTCATCTCCCAAGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455511.8
ENST00000552087.1
3UTR CCA 72 bp ACATTGCAGAAGGAAGCAAGATTTACTAGGGACATCTaGATAGCCCAGGACAATGACTTCTGGGAACAGGAA +
Preference number: 3 (lower is better)
Translates to: TLQKEARFTRDI*IAQDNDFWEQE
Trigger: TTCCTGTTCCCAGAAGTCATTGTCCTGGGCTATCCAGATGTCCCTAGTAAATCTTGCTTCCTTCTGCAATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455511.8
3UTR TCA 72 bp TGCCAGCATCATGTTTATTTTGGGAGTTCTTTGTCTTaGAGGGATCCCATCAAGTATAGCAATGGCATCTTT +
Preference number: 3 (lower is better)
Translates to: CQHHVYFGSSLS*RDPIKYSNGIF
Trigger: AAAGATGCCATTGCTATACTTGATGGGATCCCTTCAAGACAAAGAACTCCCAAAATAAACATGATGCTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
3UTR GCA 72 bp GTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTaGCCAAGATCACAGGTGGTGAAGGTAGTATTCAAA +
Preference number: 3 (lower is better)
Translates to: VARYRQGNVLVT*PRSQVVKVVFK
Trigger: TTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
3UTR TCA 72 bp TTACTATGTACCAGGCACAGGGCTAAGAGCTTTACATaGAATAATCATTTAACCCTCATTCGATCATTTAAT +
Preference number: 3 (lower is better)
Translates to: LLCTRHRAKSFT*NNHLTLIRSFN
Trigger: ATTAAATGATCGAATGAGGGTTAAATGATTATTTCATGTAAAGCTCTTAGCCCTGTGCCTGGTACATAGTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp CCCAGAAGCCCCAACATGTGCGTGGGTCTCGGGGCACTCCCTCAGTCCTCCCTGAGGCCACTGCGGCCATaGAGCTGCCGCCCCCTCACT +
Preference number: 4 (lower is better)
Translates to: PRSPNMCVGLGALPQSSLRPLRP*SCRPLT
Trigger: AGTGAGGGGGCGGCAGCTCCATGGCCGCAGTGGCCT...CAGGGAGGACTGAGGGAGTGCCCCGAGACCCACGCACATGTTGGGGCTTCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp GCCCAGAAGCCCCAACATGTGCGTGGGTCTCGGGGCACTCCCTCAGTCCTCCCTCGCCCCCTCACTGCATaGCGAACCACTGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: AQKPQHVRGSRGTPSVLPRPLTA*RTTAPG
Trigger: ACCAGGAGCAGTGGTTCGGCATGCAGTGAGGGGGCG...AGGGAGGACTGAGGGAGTGCCCCGAGACCCACGCACATGTTGGGGCTTCTGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp CCCAGAAGCCCCAACATGTGCGTGGGTCTCGGGGCACTCCCTCAGTCCTCCCTGGGGGGCAGAGACCCCTaGTGCAATCACATGCTGAAT +
Preference number: 4 (lower is better)
Translates to: PRSPNMCVGLGALPQSSLGGRDP*CNHMLN
Trigger: ATTCAGCATGTGATTGCAGCAGGGGTCTCTGCCCCC...CAGGGAGGACTGAGGGAGTGCCCCGAGACCCACGCACATGTTGGGGCTTCTGGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp CTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCACGGAAGTGCTCAGAGCAGCTGCCGCCCCCTCACTaGATGCCGAACCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLRAGSYGSFSPRKCSEQLPPPH*MPNHCS
Trigger: GGAGCAGTGGTTCGGCATGCAGTGAGGGGGCGGCAG...CTGCTCTGAGCACTTCCGTGGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp GCCACCTCTGCCCCTTTTACAGAAAGGGACAACAAGCCTAGAATGGCATCAAGGAGCCGCACGTTGGAGTaGAGCCCCGCGGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: ATSAPFTERDNKPRMASRSRTLE*SPAAAM
Trigger: CATGGCGGCCGCGGGGCTGCACTCCAACGTGCGGCT...CCTTGATGCCATTCTAGGCTTGTTGTCCCTTTCTGTAAAAGGGGCAGAGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR GCA 90 bp ATCATTGTCCTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCACGGAAGTGCCTGCGGCCATGGAGCTaGCGCCCCCTCACTGCATGC +
Preference number: 4 (lower is better)
Translates to: IIVLLRAGSYGSFSPRKCLRPWS*RPLTAC
Trigger: GCATGCAGTGAGGGGGCGGCAGCTCCATGGCCGCAG...GCACTTCCGTGGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAGGACAATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp GCCCAGAAGCCCCAACATGTGCGTGGGTCTCGGGGCACTCCCTCAGTCCTCCCTGGCAGAGACCCCTGCTaGAATCACATGCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: AQKPQHVRGSRGTPSVLPGRDPC*NHMLNH
Trigger: ATGATTCAGCATGTGATTGCAGCAGGGGTCTCTGCC...AGGGAGGACTGAGGGAGTGCCCCGAGACCCACGCACATGTTGGGGCTTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp TCTGGGAACAGGAAGCTCCCTAGGGCCAGATCGTGCTGCCATCCAACTTGGGAGAGAAGCCCCAACATGTaGGTGGGTCTCGGGGCACTC +
Preference number: 4 (lower is better)
Translates to: SGNRKLPRARSCCHPTWERSPNM*VGLGAL
Trigger: GAGTGCCCCGAGACCCACGCACATGTTGGGGCTTCT...CTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAGGGAGCTTCCTGTTCCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CCA 90 bp ATCATTGTCCTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCACGGAAGTGCTCCTGGTCAGCCCACTaGGCCGCCTCACTGTCGCTG +
Preference number: 4 (lower is better)
Translates to: IIVLLRAGSYGSFSPRKCSWSAH*AASLSL
Trigger: CAGCGACAGTGAGGCGGCCCAGTGGGCTGACCAGGA...GCACTTCCGTGGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAGGACAATGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CCA 90 bp CACATGCTGAATCATTGTCCTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCCCGAACCACTGCTCCTaGTCAGCCCACTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HMLNHCPSESRLLRFLQSPNHCS*SAHWAA
Trigger: GGCGGCCCAGTGGGCTGACCAGGAGCAGTGGTTCGG...GGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAGGACAATGATTCAGCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp CTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCACGGAAGTGCTCAGAGCAGTTCAGTCCACGGAAGTaGTCAGAGCAGGGCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLRAGSYGSFSPRKCSEQFSPRK*SEQGRP
Trigger: TGGCCTGCCCTGCTCTGAGCACTTCCGTGGACTGAA...CTGCTCTGAGCACTTCCGTGGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CCA 90 bp CCCAGAAGCCCCAACATGTGCGTGGGTCTCGGGGCACTCCCTCAGTCCTCCCTGATGGCCTCCCGAAAGTaGATTATTGCTTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: PRSPNMCVGLGALPQSSLMASRK*IIASWT
Trigger: AGTCCAAGAAGCAATAATCCACTTTCGGGAGGCCAT...CAGGGAGGACTGAGGGAGTGCCCCGAGACCCACGCACATGTTGGGGCTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CCA 90 bp GCCCAGAAGCCCCAACATGTGCGTGGGTCTCGGGGCACTCCCTCAGTCCTCCCTATTATCGTGCTGGGATaGTGGGTAACTCCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: AQKPQHVRGSRGTPSVLPIIVLG*WVTPSN
Trigger: GTTTGAAGGAGTTACCCACCATCCCAGCACGATAAT...AGGGAGGACTGAGGGAGTGCCCCGAGACCCACGCACATGTTGGGGCTTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR TCA 90 bp TCTGGGAACAGGAAGCTCCCTAGGGCCAGATCGTGCTGCCATCCAACTTGGGAGAGGACACAGTCACTCTaGTTAGCCAGTGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SGNRKLPRARSCCHPTWERTQSL*LASAFL
Trigger: GAGGAACGCACTGGCTAATCAGAGTGACTGTGTCCT...CTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAGGGAGCTTCCTGTTCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR TCA 90 bp AGGGACAACAAGCCTAGAATGGCATCAAGGGCTAATGGGCACTGCCTCAGCACCCCTCCTTATAGCTGGTaGCTGAAGGGCGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: RDNKPRMASRANGHCLSTPPYSW*LKGAPD
Trigger: GTCAGGAGCGCCCTTCAGTCACCAGCTATAAGGAGG...GGTGCTGAGGCAGTGCCCATTAGCCCTTGATGCCATTCTAGGCTTGTTGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR GCA 90 bp CTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCACGGAAGTGCTCAGAGCAGAGGGCCAGATCGTGCTaGCATCCAACTTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LLRAGSYGSFSPRKCSEQRARSC*HPTWEM
Trigger: CATCTCCCAAGTTGGATGGCAGCACGATCTGGCCCT...CTGCTCTGAGCACTTCCGTGGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp CTCCCTAGGGCCAGATCGTGCTGCCATCCAACTTGGGAGATGACATTATCGTGCCCTAGGGCCAGATCGTaGTGCCATCCAACTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPRARSCCHPTWEMTLSCPRARS*CHPTWE
Trigger: CTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAGG...GCACGATAATGTCATCTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CCA 90 bp CCCAGAAGCCCCAACATGTGCGTGGGTCTCGGGGCACTCCCTCAGTCCTCCCTGTATAAAAAGTACTCTTaGCCCAGAAGCCCCAACATG +
Preference number: 4 (lower is better)
Translates to: PRSPNMCVGLGALPQSSLYKKYS*PRSPNM
Trigger: CATGTTGGGGCTTCTGGGCCAAGAGTACTTTTTATA...CAGGGAGGACTGAGGGAGTGCCCCGAGACCCACGCACATGTTGGGGCTTCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CCA 90 bp GCTCCTACGGTTCCTTCAGTCCACGGAAGTGCTCAGAGCAGGGCAGGCCACTGCATCGTGCTGGGATGGTaGGTAACTCCTTCAAACCAA +
Preference number: 4 (lower is better)
Translates to: APTVPSVHGSAQSRAGHCIVLGW*VTPSNQ
Trigger: TTGGTTTGAAGGAGTTACCCACCATCCCAGCACGAT...GCAGTGGCCTGCCCTGCTCTGAGCACTTCCGTGGACTGAAGGAACCGTAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
3UTR CAA 72 bp AGGGAACTGCCCCAGGTGCACCTCTGGTTCATGCTCTaGTCACACCTGTTTCTCAGATCAGCCCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: RELPQVHLWFML*SHLFLRSAQAQ
Trigger: CTGAGCCTGGGCTGATCTGAGAAACAGGTGTGACAAGAGCATGAACCAGAGGTGCACCTGGGGCAGTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455511.8
CDS-3UTR TCA 90 bp CACATGCTGAATCATTGTCCTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCTCCACATCCTCCTCCTaGGTGGCATCCGTGGGACTC +
Preference number: 4 (lower is better)
Translates to: HMLNHCPSESRLLRFLQSSTSSS*VASVGL
Trigger: GAGTCCCACGGATGCCACTCAGGAGGAGGATGTGGA...GGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAGGACAATGATTCAGCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp GCCACCTCTGCCCCTTTTACAGAAAGGGACAACAAGCCTAGAATGGCATCAAGGACATTCATCCTGCTCTaGAAAGCCGCGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: ATSAPFTERDNKPRMASRTFILL*KAAGSG
Trigger: GCCGCTGCCCGCGGCTTTGCAGAGCAGGATGAATGT...CCTTGATGCCATTCTAGGCTTGTTGTCCCTTTCTGTAAAAGGGGCAGAGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR GCA 90 bp CACATGCTGAATCATTGTCCTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCTGCATGCCGAACCACTaGTCCTGGTCAGCCCACTGG +
Preference number: 4 (lower is better)
Translates to: HMLNHCPSESRLLRFLQSCMPNH*SWSAHW
Trigger: CCAGTGGGCTGACCAGGAGCAGTGGTTCGGCATGCA...GGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAGGACAATGATTCAGCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CCA 90 bp CTCCTACGGTTCCTTCAGTCCACGGAAGTGCTCAGAGCAGGGCAGGCCACTGCGGAGACTTCTGGTCATTaGGGTCCAAACTTAGTGCTA +
Preference number: 4 (lower is better)
Translates to: LLRFLQSTEVLRAGQATAETSGH*GPNLVL
Trigger: TAGCACTAAGTTTGGACCCCAATGACCAGAAGTCTC...CGCAGTGGCCTGCCCTGCTCTGAGCACTTCCGTGGACTGAAGGAACCGTAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CCA 90 bp AGGGCCAGATCGTGCTGCCATCCAACTTGGGAGATGACATTATCGTGCTGGGATCCTGAGTGGCATCCGTaGGACTCTCCTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RARSCCHPTWEMTLSCWDPEWHP*DSPPSP
Trigger: TGGAGAAGGAGGAGAGTCCCACGGATGCCACTCAGG...ATCCCAGCACGATAATGTCATCTCCCAAGTTGGATGGCAGCACGATCTGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CCA 90 bp AGGAAGCTCCCTAGGGCCAGATCGTGCTGCCATCCAACTTGGGAGATGACATTAGTCACGACTAGGAATTaGGAGCGAGGGGGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RKLPRARSCCHPTWEMTLVTTRN*ERGGRD
Trigger: GTCTCTGCCCCCTCGCTCCCAATTCCTAGTCGTGAC...TAATGTCATCTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAGGGAGCTTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR TCA 90 bp CCACCTCTGCCCCTTTTACAGAAAGGGACAACAAGCCTAGAATGGCATCAAGGGCTTATAGCTGGTGACTaGAGGGCGCTCCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: PPLPLLQKGTTSLEWHQGLIAGD*RALLTS
Trigger: GCTGGTCAGGAGCGCCCTTCAGTCACCAGCTATAAG...CCCTTGATGCCATTCTAGGCTTGTTGTCCCTTTCTGTAAAAGGGGCAGAGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR GCA 90 bp GCTCCTACGGTTCCTTCAGTCCACGGAAGTGCTCAGAGCAGGGCAGGCCACTGCACTATACTGGTCCATTaGCTCCTGATACTCATTGAC +
Preference number: 4 (lower is better)
Translates to: APTVPSVHGSAQSRAGHCTILVH*LLILID
Trigger: GTCAATGAGTATCAGGAGGCAATGGACCAGTATAGT...GCAGTGGCCTGCCCTGCTCTGAGCACTTCCGTGGACTGAAGGAACCGTAGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp GGAGATGACATTATCGTGCTGGGATGGTGGGTAACTCCTTCAAACCAATCCATGCCGCCTCACTGTCGCTaGCCTCCAGGTCCCCTTCTT +
Preference number: 4 (lower is better)
Translates to: GDDIIVLGWWVTPSNQSMPPHCR*PPGPLL
Trigger: AAGAAGGGGACCTGGAGGGCAGCGACAGTGAGGCGG...CATGGATTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAATGTCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CCA 90 bp ATTATCGTGCTGGGATGGTGGGTAACTCCTTCAAACCAATCCATGTCACAGAACGCCCCAACATGTGCGTaGGTCTCGGGGCACTCCCTC +
Preference number: 4 (lower is better)
Translates to: IIVLGWWVTPSNQSMSQNAPTCA*VSGHSL
Trigger: GAGGGAGTGCCCCGAGACCCACGCACATGTTGGGGC...GTTCTGTGACATGGATTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR TCA 90 bp CGCTTTGATCCACACAGAGAGCCAGTCCAAGTTAGGCACGGTTTGGATCACATTACTGAAGGGCGCTCCTaGCCAGCCTTCTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: RFDPHREPVQVRHGLDHITEGRS*PAFLYR
Trigger: CCTGTACAAGAAGGCTGGTCAGGAGCGCCCTTCAGT...AATGTGATCCAAACCGTGCCTAACTTGGACTGGCTCTCTGTGTGGATCAAAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR TCA 90 bp ATTGTCCTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCACGGAAGTGCTCAGAATCATTGTCCTTCTaGGAGCAGGCTCCTACGGTT +
Preference number: 4 (lower is better)
Translates to: IVLLRAGSYGSFSPRKCSESLSF*EQAPTV
Trigger: AACCGTAGGAGCCTGCTCTCAGAAGGACAATGATTC...TGAGCACTTCCGTGGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAGGACAAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp ATGAAGTCACGACTAGGAATTGGGAGCGAGGGGGCAGAGACCCCTGCTGCAATCACTCTGATTAGCCAGTaGGTTCCTCAGCAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: MKSRLGIGSEGAETPAAITLISQ*VPQQSN
Trigger: ATTGCTTTGCTGAGGAACGCACTGGCTAATCAGAGT...GATTGCAGCAGGGGTCTCTGCCCCCTCGCTCCCAATTCCTAGTCGTGACTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR TCA 90 bp CCACCTCTGCCCCTTTTACAGAAAGGGACAACAAGCCTAGAATGGCATCAAGGGGGTACTGATTGCTCTTaGGTTGTCACCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: PPLPLLQKGTTSLEWHQGGTDCS*VVTSVH
Trigger: GTGCACACTGGTGACAACTCAAGAGCAATCAGTACC...CCCTTGATGCCATTCTAGGCTTGTTGTCCCTTTCTGTAAAAGGGGCAGAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR TCA 90 bp AGGAAGCTCCCTAGGGCCAGATCGTGCTGCCATCCAACTTGGGAGATGACATTAATCCAACTTGGGAGATaGCATTATCGTGCTGGGATG +
Preference number: 4 (lower is better)
Translates to: RKLPRARSCCHPTWEMTLIQLGR*HYRAGM
Trigger: CATCCCAGCACGATAATGTCATCTCCCAAGTTGGAT...TAATGTCATCTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAGGGAGCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp ACCTCTGCCCCTTTTACAGAAAGGGACAACAAGCCTAGAATGGCATCAAGGGCTCTATCACATTCATCCTaGTCTGCAAAGCCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: TSAPFTERDNKPRMASRALSHSS*SAKPRA
Trigger: TGCCCGCGGCTTTGCAGAGCAGGATGAATGTGATAG...AGCCCTTGATGCCATTCTAGGCTTGTTGTCCCTTTCTGTAAAAGGGGCAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR GCA 90 bp AGGAAGCTCCCTAGGGCCAGATCGTGCTGCCATCCAACTTGGGAGATGACATTATCCTTCTCCATCTTCTaGATCCCCTCTAGAGACTTC +
Preference number: 4 (lower is better)
Translates to: RKLPRARSCCHPTWEMTLSFSIF*IPSRDF
Trigger: GAAGTCTCTAGAGGGGATGCAGAAGATGGAGAAGGA...TAATGTCATCTCCCAAGTTGGATGGCAGCACGATCTGGCCCTAGGGAGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CCA 90 bp TACGCTTTGATCCACACAGAGAGCCAGTCCAAGTTAGGCACGGTTTGGATCACAGCCATGTCCCGCACGTaGTCTATCACATTCATCCTG +
Preference number: 4 (lower is better)
Translates to: YALIHTESQSKLGTVWITAMSRT*SITFIL
Trigger: CAGGATGAATGTGATAGACCACGTGCGGGACATGGC...TGTGATCCAAACCGTGCCTAACTTGGACTGGCTCTCTGTGTGGATCAAAGCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR CCA 90 bp CTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCACGGAAGTGCTCAGAGCAGTGGATTATTGCTTCTTaGACTCTGCCCATGTTCCTA +
Preference number: 4 (lower is better)
Translates to: LLRAGSYGSFSPRKCSEQWIIAS*TLPMFL
Trigger: TAGGAACATGGGCAGAGTCCAAGAAGCAATAATCCA...CTGCTCTGAGCACTTCCGTGGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
3UTR CAA 72 bp GATCCACACAGAGAGCCAGTCCAAGTTAGGCACGGTTaGGATCACATTCATTGTCATGGATGCCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: DPHREPVQVRHG*DHIHCHGCHLC
Trigger: GCAGAGGTGGCATCCATGACAATGAATGTGATCCAAACCGTGCCTAACTTGGACTGGCTCTCTGTGTGGATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR TCA 90 bp GAAAGGGACAACAAGCCTAGAATGGCATCAAGGGCTAATGGGCACTGCCTCAGCGTGAACAGATGGTACTaGTTGCTCTTGAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: ERDNKPRMASRANGHCLSVNRWY*LLLSCH
Trigger: GTGACAACTCAAGAGCAATCAGTACCATCTGTTCAC...GCTGAGGCAGTGCCCATTAGCCCTTGATGCCATTCTAGGCTTGTTGTCCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR GCA 90 bp ATTACTATTATTATTCTGCTTTCAACCATGGACACAAAGTGTGTGTGTGTTTCCAGCCGCACGTTGGAGTaGAGCCCCGCGGCCGCCATG +
Preference number: 4 (lower is better)
Translates to: ITIIILLSTMDTKCVCVSSRTLE*SPAAAM
Trigger: CATGGCGGCCGCGGGGCTGCACTCCAACGTGCGGCT...GGAAACACACACACACTTTGTGTCCATGGTTGAAAGCAGAATAATAATAGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp ATTGTCCTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCACGGAAGTGCTCACCGAAAGTGGATTATTaGTTCTTGGACTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: IVLLRAGSYGSFSPRKCSPKVDY*FLDSAH
Trigger: ATGGGCAGAGTCCAAGAAGCAATAATCCACTTTCGG...TGAGCACTTCCGTGGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAGGACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
3UTR CAA 72 bp CTTGAGTTGTCACCAGTGTGCACAAAAGCATACGCTTaGATCCACACAGAGAGCCAGTCCAAGTTAGGCACG +
Preference number: 4 (lower is better)
Translates to: LELSPVCTKAYA*IHTESQSKLGT
Trigger: CGTGCCTAACTTGGACTGGCTCTCTGTGTGGATCAAAGCGTATGCTTTTGTGCACACTGGTGACAACTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR TCA 90 bp AGCATACGCTTTGATCCACACAGAGAGCCAGTCCAAGTTAGGCACGGTTTGGATCAAAAGCATACGCTTTaGTCCACACAGAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SIRFDPHREPVQVRHGLDQKHTL*STQRAS
Trigger: ACTGGCTCTCTGTGTGGATCAAAGCGTATGCTTTTG...ATCCAAACCGTGCCTAACTTGGACTGGCTCTCTGTGTGGATCAAAGCGTATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR TCA 90 bp AACTTGGGAGATGACATTATCGTGCTGGGATGGTGGGTAACTCCTTCAAACCAAGATAGCCCAGGACAATaGCTTCTGGGAACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: NLGDDIIVLGWWVTPSNQDSPGQ*LLGTGS
Trigger: GCTTCCTGTTCCCAGAAGTCATTGTCCTGGGCTATC...TTGGTTTGAAGGAGTTACCCACCATCCCAGCACGATAATGTCATCTCCCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp AGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAACATTCATCCTGCTCTaGAAAGCCGCGGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: RKCVSNLPKITGGEGSIQTFILL*KAAGSG
Trigger: GCCGCTGCCCGCGGCTTTGCAGAGCAGGATGAATGT...TTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAACACATTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp CCAGTCCAAGTTAGGCACGGTTTGGATCACATTCATTGTCATGGATGCCACCTCTCACATTCATTGTCATaGATGCCACCTCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: PVQVRHGLDHIHCHGCHLSHSLS*MPPLPL
Trigger: AAGGGGCAGAGGTGGCATCCATGACAATGAATGTGA...GAGGTGGCATCCATGACAATGAATGTGATCCAAACCGTGCCTAACTTGGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
3UTR CAA 72 bp CTGAAGGGCGCTCCTGACCAGCCTTCTTGTACAGGTTaGCCAGCATCATGTTTATTTTGGGAGTTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: LKGAPDQPSCTG*PASCLFWEFFV
Trigger: GACAAAGAACTCCCAAAATAAACATGATGCTGGCAAACCTGTACAAGAAGGCTGGTCAGGAGCGCCCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR TCA 90 bp CGCTTTGATCCACACAGAGAGCCAGTCCAAGTTAGGCACGGTTTGGATCACATTGGGAGTTCTTTGTCTTaGAGGGATCCCATCAAGTAT +
Preference number: 4 (lower is better)
Translates to: RFDPHREPVQVRHGLDHIGSSLS*RDPIKY
Trigger: ATACTTGATGGGATCCCTTCAAGACAAAGAACTCCC...AATGTGATCCAAACCGTGCCTAACTTGGACTGGCTCTCTGTGTGGATCAAAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR TCA 90 bp ATATGTGTGTGTGGGCAAGGACAGAAGATGAGCTATACAAATGAACACAGATGTCCTCCTTATAGCTGGTaGCTGAAGGGCGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: ICVCGQGQKMSYTNEHRCPPYSW*LKGAPD
Trigger: GTCAGGAGCGCCCTTCAGTCACCAGCTATAAGGAGG...ACATCTGTGTTCATTTGTATAGCTCATCTTCTGTCCTTGCCCACACACACATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp TACGCTTTGATCCACACAGAGAGCCAGTCCAAGTTAGGCACGGTTTGGATCACAATTCATTGTCATGGATaGCACCTCTGCCCCTTTTAC +
Preference number: 4 (lower is better)
Translates to: YALIHTESQSKLGTVWITIHCHG*HLCPFY
Trigger: GTAAAAGGGGCAGAGGTGGCATCCATGACAATGAAT...TGTGATCCAAACCGTGCCTAACTTGGACTGGCTCTCTGTGTGGATCAAAGCGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR TCA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGACAGCGGCGGCAGCACTaGCTCGAAAAGCCGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRQRRQH*LEKPVE
Trigger: CTCTACCGGCTTTTCGAGTCAGTGCTGCCGCCGCTG...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp AGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACCTCTATCACATTCATCCTaGTCTGCAAAGCCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SNLPKITGGEGSIQNFRPLSHSS*SAKPRA
Trigger: TGCCCGCGGCTTTGCAGAGCAGGATGAATGTGATAG...AGGTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp TCAGACCTCAAGTTCTTAATGACTACAGTAGATAGAAACATGGGAAAGTACTTACTCTACCCTCCTCAGTaGCCTTCCCCCAAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SDLKFLMTTVDRNMGKYLLYPPQ*PSPKGG
Trigger: GCCTCCCTTGGGGGAAGGCCACTGAGGAGGGTAGAG...TAAGTACTTTCCCATGTTTCTATCTACTGTAGTCATTAAGAACTTGAGGTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp TCAGACCTCAAGTTCTTAATGACTACAGTAGATAGAAACATGGGAAAGTACTTAGGGAAGACTCCAAAATaGCGGCGTCGCCGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SDLKFLMTTVDRNMGKYLGKTPK*RRRRGP
Trigger: TGGACCCCGGCGACGCCGCCATTTTGGAGTCTTCCC...TAAGTACTTTCCCATGTTTCTATCTACTGTAGTCATTAAGAACTTGAGGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp GCCACCTCTGCCCCTTTTACAGAAAGGGACAACAAGCCTAGAATGGCATCAAGGAAGTTAGGCACGGTTTaGATCACATTCATTGTCATG +
Preference number: 4 (lower is better)
Translates to: ATSAPFTERDNKPRMASRKLGTV*ITFIVM
Trigger: CATGACAATGAATGTGATCCAAACCGTGCCTAACTT...CCTTGATGCCATTCTAGGCTTGTTGTCCCTTTCTGTAAAAGGGGCAGAGGTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR CCA 90 bp TGGTGGGTAACTCCTTCAAACCAATCCATGTCACAGAACACTGTCTATTCCTTGGAGGATGGAGATACATaGAAGGTTGGTCAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WWVTPSNQSMSQNTVYSLEDGDT*KVGQAL
Trigger: CAGAGCCTGACCAACCTTCCATGTATCTCCATCCTC...CAAGGAATAGACAGTGTTCTGTGACATGGATTGGTTTGAAGGAGTTACCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR TCA 90 bp TTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACAGGACACAGTCACTCTaGTTAGCCAGTGCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LVTCPRSQVVKVVFKTSDRTQSL*LASAFL
Trigger: GAGGAACGCACTGGCTAATCAGAGTGACTGTGTCCT...GTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp TGGTGGGTAACTCCTTCAAACCAATCCATGTCACAGAACACTGTCTATTCCTTGTGGTCCATTGCCTCCTaGTACTCATTGACAGCTACA +
Preference number: 4 (lower is better)
Translates to: WWVTPSNQSMSQNTVYSLWSIAS*YSLTAT
Trigger: TGTAGCTGTCAATGAGTATCAGGAGGCAATGGACCA...CAAGGAATAGACAGTGTTCTGTGACATGGATTGGTTTGAAGGAGTTACCCACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR TCA 90 bp CTGGGATGGTGGGTAACTCCTTCAAACCAATCCATGTCACAGAACACTGTCTATGCTGCAATCACATGCTaGATCATTGTCCTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LGWWVTPSNQSMSQNTVYAAITC*IIVLLR
Trigger: TCTCAGAAGGACAATGATTCAGCATGTGATTGCAGC...ATAGACAGTGTTCTGTGACATGGATTGGTTTGAAGGAGTTACCCACCATCCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR GCA 90 bp ACCAGCCTTCTTGTACAGGTTTGCCAGCATCATGTTTATTTTGGGAGTTCTTTGCATGGATGCCACCTCTaGCCCTTTTACAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: TSLLVQVCQHHVYFGSSLHGCHL*PFYRKG
Trigger: TCCCTTTCTGTAAAAGGGGCAGAGGTGGCATCCATG...CAAAGAACTCCCAAAATAAACATGATGCTGGCAAACCTGTACAAGAAGGCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR CCA 90 bp AGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAATCAGCTGAATGGCCTTaGCTCCTAAATAGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: RKCVSNLPKITGGEGSIQSAEWP*LLNRGP
Trigger: GGGCCCTCTATTTAGGAGCCAAGGCCATTCAGCTGA...TTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAACACATTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGAACTGAAGGGCGCTCCTaGCCAGCCTTCTTGTACAGG +
Preference number: 4 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRTEGRS*PAFLYR
Trigger: CCTGTACAAGAAGGCTGGTCAGGAGCGCCCTTCAGT...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGACTTATAGCTGGTGACTaGAGGGCGCTCCTGACCAGC +
Preference number: 4 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRLIAGD*RALLTS
Trigger: GCTGGTCAGGAGCGCCCTTCAGTCACCAGCTATAAG...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp GTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGCATGGATGCCACCTCTaGCCCTTTTACAGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: VARYRQGNVLVTCPRSQVHGCHL*PFYRKG
Trigger: TCCCTTTCTGTAAAAGGGGCAGAGGTGGCATCCATG...CACCTGTGATCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp ATTATTCTGCTTTCAACCATGGACACAAAGTGTGTGTGTGTTTCCATAACTCCTCCCGGGAGTAGCGTTTaGTATAGAAGCTGTGACAGC +
Preference number: 4 (lower is better)
Translates to: IILLSTMDTKCVCVSITPPGSSV*YRSCDS
Trigger: GCTGTCACAGCTTCTATAGCAAACGCTACTCCCGGG...AGGAGTTATGGAAACACACACACACTTTGTGTCCATGGTTGAAAGCAGAATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp GCCAGCATCATGTTTATTTTGGGAGTTCTTTGTCTTGAAGGGATCCCATCAAGTACAACAAGCCTAGAATaGCATCAAGGGCTAATGGGC +
Preference number: 4 (lower is better)
Translates to: ASIMFILGVLCLEGIPSSTTSLE*HQGLMG
Trigger: GCCCATTAGCCCTTGATGCCATTCTAGGCTTGTTGT...ACTTGATGGGATCCCTTCAAGACAAAGAACTCCCAAAATAAACATGATGCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR CCA 90 bp AGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACCTTCACATTCATTGTCATaGATGCCACCTCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SNLPKITGGEGSIQNFRPSHSLS*MPPLPL
Trigger: AAGGGGCAGAGGTGGCATCCATGACAATGAATGTGA...AGGTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp GGTAACTCCTTCAAACCAATCCATGTCACAGAACACTGTCTATTCCTTGAGCTTCCCTCTAGAGACTTCTaGTCATTGGGGTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: GNSFKPIHVTEHCLFLELPSRDF*SLGSKL
Trigger: AAGTTTGGACCCCAATGACCAGAAGTCTCTAGAGGG...AAGCTCAAGGAATAGACAGTGTTCTGTGACATGGATTGGTTTGAAGGAGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CCA 90 bp GGTAACTCCTTCAAACCAATCCATGTCACAGAACACTGTCTATTCCTTGAGCTTTGCTGCCATCCAACTTaGGAGATGACATTATCGTGC +
Preference number: 4 (lower is better)
Translates to: GNSFKPIHVTEHCLFLELCCHPT*EMTLSC
Trigger: GCACGATAATGTCATCTCCCAAGTTGGATGGCAGCA...AAGCTCAAGGAATAGACAGTGTTCTGTGACATGGATTGGTTTGAAGGAGTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR TCA 90 bp ATATGTGTGTGTGGGCAAGGACAGAAGATGAGCTATACAAATGAACACAGATGTTGGTCCATTGCCTCCTaGTACTCATTGACAGCTACA +
Preference number: 4 (lower is better)
Translates to: ICVCGQGQKMSYTNEHRCWSIAS*YSLTAT
Trigger: TGTAGCTGTCAATGAGTATCAGGAGGCAATGGACCA...ACATCTGTGTTCATTTGTATAGCTCATCTTCTGTCCTTGCCCACACACACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp ATATGTGTGTGTGGGCAAGGACAGAAGATGAGCTATACAAATGAACACAGATGTTATTGTCTCCAGCTCTaGAGTACAGATCTGCCAAGC +
Preference number: 4 (lower is better)
Translates to: ICVCGQGQKMSYTNEHRCYCLQL*STDLPS
Trigger: GCTTGGCAGATCTGTACTTCAGAGCTGGAGACAATA...ACATCTGTGTTCATTTGTATAGCTCATCTTCTGTCCTTGCCCACACACACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp ATATGTGTGTGTGGGCAAGGACAGAAGATGAGCTATACAAATGAACACAGATGTGCTGATCAGAGATATTaGAAAGGCGGCATCCAAGGT +
Preference number: 4 (lower is better)
Translates to: ICVCGQGQKMSYTNEHRCADQRY*KGGIQG
Trigger: ACCTTGGATGCCGCCTTTTCAATATCTCTGATCAGC...ACATCTGTGTTCATTTGTATAGCTCATCTTCTGTCCTTGCCCACACACACATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp AGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACCTACTCTGATTAGCCAGTaGGTTCCTCAGCAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: SNLPKITGGEGSIQNFRPTLISQ*VPQQSN
Trigger: ATTGCTTTGCTGAGGAACGCACTGGCTAATCAGAGT...AGGTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp GTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGACAACAAGCCTAGAATaGCATCAAGGGCTAATGGGC +
Preference number: 4 (lower is better)
Translates to: VARYRQGNVLVTCPRSQVTTSLE*HQGLMG
Trigger: GCCCATTAGCCCTTGATGCCATTCTAGGCTTGTTGT...CACCTGTGATCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
3UTR CAA 72 bp TTCTCTAGTGAACAGATGGTACTGATTGCTCTTGAGTaGTCACCAGTGTGCACAAAAGCATACGCTTTGATC +
Preference number: 4 (lower is better)
Translates to: FSSEQMVLIALE*SPVCTKAYALI
Trigger: GATCAAAGCGTATGCTTTTGTGCACACTGGTGACAACTCAAGAGCAATCAGTACCATCTGTTCACTAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR TCA 90 bp TTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACAAAAGCTGGTACTTCTaGGGTGGGGAGAATAACTCA +
Preference number: 4 (lower is better)
Translates to: LVTCPRSQVVKVVFKTSDKSWYF*GGENNS
Trigger: TGAGTTATTCTCCCCACCTCAGAAGTACCAGCTTTT...GTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp ATTATTCTGCTTTCAACCATGGACACAAAGTGTGTGTGTGTTTCCATAACTCCTCAAAAGCATACGCTTTaGTCCACACAGAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: IILLSTMDTKCVCVSITPQKHTL*STQRAS
Trigger: ACTGGCTCTCTGTGTGGATCAAAGCGTATGCTTTTG...AGGAGTTATGGAAACACACACACACTTTGTGTCCATGGTTGAAAGCAGAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp ATATGTGTGTGTGGGCAAGGACAGAAGATGAGCTATACAAATGAACACAGATGTGTGAACAGATGGTACTaGTTGCTCTTGAGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: ICVCGQGQKMSYTNEHRCVNRWY*LLLSCH
Trigger: GTGACAACTCAAGAGCAATCAGTACCATCTGTTCAC...ACATCTGTGTTCATTTGTATAGCTCATCTTCTGTCCTTGCCCACACACACATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp GTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGCTATTACTGTTCAGCTaGATGGCCTTGGCTCCTAAA +
Preference number: 4 (lower is better)
Translates to: VARYRQGNVLVTCPRSQVLLLFS*MALAPK
Trigger: TTTAGGAGCCAAGGCCATTCAGCTGAACAGTAATAG...CACCTGTGATCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp ATATGTGTGTGTGGGCAAGGACAGAAGATGAGCTATACAAATGAACACAGATGTAAGGGTAAGGGTCTGTaGATTTGCTCCCAGAGTTTT +
Preference number: 4 (lower is better)
Translates to: ICVCGQGQKMSYTNEHRCKGKGL*ICSQSF
Trigger: AAAACTCTGGGAGCAAATGCACAGACCCTTACCCTT...ACATCTGTGTTCATTTGTATAGCTCATCTTCTGTCCTTGCCCACACACACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp GTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGAGGATCCAACATCTGTaGCTGTTCAAACTTGAGGAC +
Preference number: 4 (lower is better)
Translates to: VARYRQGNVLVTCPRSQVRIQHL*LFKLED
Trigger: GTCCTCAAGTTTGAACAGGCACAGATGTTGGATCCT...CACCTGTGATCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp AGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAATTTCTCCTGTGTCACTaGGTCTTCAAGACAAACGGT +
Preference number: 4 (lower is better)
Translates to: RKCVSNLPKITGGEGSIQFLLCH*VFKTNG
Trigger: ACCGTTTGTCTTGAAGACCCAGTGACACAGGAGAAA...TTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAACACATTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGAGCCATGTCCCGCACGTaGTCTATCACATTCATCCTG +
Preference number: 4 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRAMSRT*SITFIL
Trigger: CAGGATGAATGTGATAGACCACGTGCGGGACATGGC...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp AGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAATGGCCTCCCGAAAGTaGATTATTGCTTCTTGGACT +
Preference number: 4 (lower is better)
Translates to: RKCVSNLPKITGGEGSIQMASRK*IIASWT
Trigger: AGTCCAAGAAGCAATAATCCACTTTCGGGAGGCCAT...TTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAACACATTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGAGGTACTGATTGCTCTTaGGTTGTCACCAGTGTGCAC +
Preference number: 4 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRGTDCS*VVTSVH
Trigger: GTGCACACTGGTGACAACTCAAGAGCAATCAGTACC...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp AGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACCTTTAAGTAGCAGAGCTTaGACACTATTACTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: SNLPKITGGEGSIQNFRPLSSRA*TLLLFS
Trigger: GCTGAACAGTAATAGTGTTCAAGCTCTGCTACTTAA...AGGTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp ATATGTGTGTGTGGGCAAGGACAGAAGATGAGCTATACAAATGAACACAGATGTAAGGGTCTGTGCATTTaGTCCCAGAGTTTTGTAAAC +
Preference number: 4 (lower is better)
Translates to: ICVCGQGQKMSYTNEHRCKGLCI*SQSFVN
Trigger: GTTTACAAAACTCTGGGAGCAAATGCACAGACCCTT...ACATCTGTGTTCATTTGTATAGCTCATCTTCTGTCCTTGCCCACACACACATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp AGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAACTATACTGGTCCATTaGCTCCTGATACTCATTGAC +
Preference number: 4 (lower is better)
Translates to: RKCVSNLPKITGGEGSIQTILVH*LLILID
Trigger: GTCAATGAGTATCAGGAGGCAATGGACCAGTATAGT...TTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAACACATTTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp GTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGAATGTGTTAGTAACTTaGCCAAGATCACAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VARYRQGNVLVTCPRSQVNVLVT*PRSQVV
Trigger: CACCACCTGTGATCTTGGGCAAGTTACTAACACATT...CACCTGTGATCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp ATTATTCTGCTTTCAACCATGGACACAAAGTGTGTGTGTGTTTCCATAACTCCTCCGAAAGTGGATTATTaGTTCTTGGACTCTGCCCAT +
Preference number: 4 (lower is better)
Translates to: IILLSTMDTKCVCVSITPPKVDY*FLDSAH
Trigger: ATGGGCAGAGTCCAAGAAGCAATAATCCACTTTCGG...AGGAGTTATGGAAACACACACACACTTTGTGTCCATGGTTGAAAGCAGAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp TTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACTACTGTTCAGCTGAATaGCCTTGGCTCCTAAATAGA +
Preference number: 4 (lower is better)
Translates to: LVTCPRSQVVKVVFKTSDYCSAE*PWLLNR
Trigger: TCTATTTAGGAGCCAAGGCCATTCAGCTGAACAGTA...GTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp ATTATTCTGCTTTCAACCATGGACACAAAGTGTGTGTGTGTTTCCATAACTCCTAAGAGAGAATCTGCATaGTACACCAAAAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: IILLSTMDTKCVCVSITPKRESA*YTKSWY
Trigger: GTACCAGCTTTTGGTGTATCATGCAGATTCTCTCTT...AGGAGTTATGGAAACACACACACACTTTGTGTCCATGGTTGAAAGCAGAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp GTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGGTGCCTGTTCAAACTTaGGGACAGAGTTTTTATTGT +
Preference number: 4 (lower is better)
Translates to: VARYRQGNVLVTCPRSQVVPVQT*GQSFYC
Trigger: ACAATAAAAACTCTGTCCTCAAGTTTGAACAGGCAC...CACCTGTGATCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp ATCATGTTTATTTTGGGAGTTCTTTGTCTTGAAGGGATCCCATCAAGTATAGCAGAGTTGTCACCAGTGTaGACAAAAGCATACGCTTTG +
Preference number: 4 (lower is better)
Translates to: IMFILGVLCLEGIPSSIAELSPV*TKAYAL
Trigger: CAAAGCGTATGCTTTTGTGCACACTGGTGACAACTC...TGCTATACTTGATGGGATCCCTTCAAGACAAAGAACTCCCAAAATAAACATGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR GCA 90 bp TGGTGGGTAACTCCTTCAAACCAATCCATGTCACAGAACACTGTCTATTCCTTGCATATTTCTGTTCTCTaGCTTCATAACAATCTAAGC +
Preference number: 4 (lower is better)
Translates to: WWVTPSNQSMSQNTVYSLHISVL*LHNNLS
Trigger: GCTTAGATTGTTATGAAGGCAGAGAACAGAAATATG...CAAGGAATAGACAGTGTTCTGTGACATGGATTGGTTTGAAGGAGTTACCCACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CCA 90 bp GTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGTCTGCTGTAAAGCCATaGTATACTTACTCACAGCAT +
Preference number: 4 (lower is better)
Translates to: VARYRQGNVLVTCPRSQVSAVKP*YTYSQH
Trigger: ATGCTGTGAGTAAGTATACCATGGCTTTACAGCAGA...CACCTGTGATCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp TTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACAAGACACTGACTTTGTaGAGTAGATGCAGAATTTCC +
Preference number: 4 (lower is better)
Translates to: LVTCPRSQVVKVVFKTSDKTLTL*SRCRIS
Trigger: GGAAATTCTGCATCTACTCCACAAAGTCAGTGTCTT...GTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
3UTR CAA 72 bp CAAAATAGCAACTGTCAGCTTAAGGCATTACTAACATaGCAGAAGGAAGCAAGATTTACTAGGGACATCTGG +
Preference number: 4 (lower is better)
Translates to: QNSNCQLKALLT*QKEARFTRDIW
Trigger: CCAGATGTCCCTAGTAAATCTTGCTTCCTTCTGCAATGTTAGTAATGCCTTAAGCTGACAGTTGCTATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455511.8
CDS-3UTR TCA 90 bp ATTACTATTATTATTCTGCTTTCAACCATGGACACAAAGTGTGTGTGTGTTTCCGGGAGTTCTTTGTCTTaGAGGGATCCCATCAAGTAT +
Preference number: 4 (lower is better)
Translates to: ITIIILLSTMDTKCVCVSGSSLS*RDPIKY
Trigger: ATACTTGATGGGATCCCTTCAAGACAAAGAACTCCC...GGAAACACACACACACTTTGTGTCCATGGTTGAAAGCAGAATAATAATAGTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp TCAGACCTCAAGTTCTTAATGACTACAGTAGATAGAAACATGGGAAAGTACTTACACGGTTCTGCATGCTaGTCAGAGATATTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SDLKFLMTTVDRNMGKYLHGSAC*SEILKR
Trigger: CCTTTTCAATATCTCTGATCAGCATGCAGAACCGTG...TAAGTACTTTCCCATGTTTCTATCTACTGTAGTCATTAAGAACTTGAGGTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp ATTACTATTATTATTCTGCTTTCAACCATGGACACAAAGTGTGTGTGTGTTTCCATTCATTGTCATGGATaGCACCTCTGCCCCTTTTAC +
Preference number: 4 (lower is better)
Translates to: ITIIILLSTMDTKCVCVSIHCHG*HLCPFY
Trigger: GTAAAAGGGGCAGAGGTGGCATCCATGACAATGAAT...GGAAACACACACACACTTTGTGTCCATGGTTGAAAGCAGAATAATAATAGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp TCAGACCTCAAGTTCTTAATGACTACAGTAGATAGAAACATGGGAAAGTACTTAGAGTTGTCACCAGTGTaGACAAAAGCATACGCTTTG +
Preference number: 4 (lower is better)
Translates to: SDLKFLMTTVDRNMGKYLELSPV*TKAYAL
Trigger: CAAAGCGTATGCTTTTGTGCACACTGGTGACAACTC...TAAGTACTTTCCCATGTTTCTATCTACTGTAGTCATTAAGAACTTGAGGTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGAAACCACCCACGGTTCTaGATGCTGATCAGAGATATT +
Preference number: 4 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRNHPRF*MLIRDI
Trigger: AATATCTCTGATCAGCATGCAGAACCGTGGGTGGTT...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp TCAGACCTCAAGTTCTTAATGACTACAGTAGATAGAAACATGGGAAAGTACTTAAGCCTTAATGTAATCTaGCCTTTGGGTCAGGGCTTT +
Preference number: 4 (lower is better)
Translates to: SDLKFLMTTVDRNMGKYLSLNVI*PLGQGF
Trigger: AAAGCCCTGACCCAAAGGCCAGATTACATTAAGGCT...TAAGTACTTTCCCATGTTTCTATCTACTGTAGTCATTAAGAACTTGAGGTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGAGGTGTGGGATGGTTATaGGTGAAACAGTTCTCTAAT +
Preference number: 4 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRGVGWL*VKQFSN
Trigger: ATTAGAGAACTGTTTCACTCATAACCATCCCACACC...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp TCAGACCTCAAGTTCTTAATGACTACAGTAGATAGAAACATGGGAAAGTACTTACTTAGCGCTTTCTTCTaGTGTAAAGCCATGGTATAC +
Preference number: 4 (lower is better)
Translates to: SDLKFLMTTVDRNMGKYLLSAFF*CKAMVY
Trigger: GTATACCATGGCTTTACAGCAGAAGAAAGCGCTAAG...TAAGTACTTTCCCATGTTTCTATCTACTGTAGTCATTAAGAACTTGAGGTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGATTCTGCTTTCAACCATaGACACAAAGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRFCFQP*TQSVCV
Trigger: CACACACACACTTTGTGTCCATGGTTGAAAGCAGAA...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp TCAGACCTCAAGTTCTTAATGACTACAGTAGATAGAAACATGGGAAAGTACTTATGGATTATTGCTTCTTaGACTCTGCCCATGTTCCTA +
Preference number: 4 (lower is better)
Translates to: SDLKFLMTTVDRNMGKYLWIIAS*TLPMFL
Trigger: TAGGAACATGGGCAGAGTCCAAGAAGCAATAATCCA...TAAGTACTTTCCCATGTTTCTATCTACTGTAGTCATTAAGAACTTGAGGTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR TCA 90 bp ATTACTATTATTATTCTGCTTTCAACCATGGACACAAAGTGTGTGTGTGTTTCCTGGGATGGTTATGAGTaGAACAGTTCTCTAATGTTG +
Preference number: 4 (lower is better)
Translates to: ITIIILLSTMDTKCVCVSWDGYE*NSSLML
Trigger: CAACATTAGAGAACTGTTTCACTCATAACCATCCCA...GGAAACACACACACACTTTGTGTCCATGGTTGAAAGCAGAATAATAATAGTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp ATTACTATTATTATTCTGCTTTCAACCATGGACACAAAGTGTGTGTGTGTTTCCGTTAGCCATTACCATTaGTTCTCGAATACTGTTGGA +
Preference number: 4 (lower is better)
Translates to: ITIIILLSTMDTKCVCVSVSHYH*FSNTVG
Trigger: TCCAACAGTATTCGAGAAGCAATGGTAATGGCTAAC...GGAAACACACACACACTTTGTGTCCATGGTTGAAAGCAGAATAATAATAGTAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGACTTCTCGAATACTGTTaGAGGCTAAGTAACATTCGA +
Preference number: 4 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRLLEYC*RLSNIR
Trigger: TCGAATGTTACTTAGCCTCCAACAGTATTCGAGAAG...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp ATTATTCTGCTTTCAACCATGGACACAAAGTGTGTGTGTGTTTCCATAACTCCTTATCTAATAATGTTTTaGCTTTCTCCTGTGTCACTG +
Preference number: 4 (lower is better)
Translates to: IILLSTMDTKCVCVSITPYLIMF*LSPVSL
Trigger: CAGTGACACAGGAGAAAGCCAAAACATTATTAGATA...AGGAGTTATGGAAACACACACACACTTTGTGTCCATGGTTGAAAGCAGAATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGAAAGTTAGGCACGGTTTaGATCACATTCATTGTCATG +
Preference number: 4 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRKLGTV*ITFIVM
Trigger: CATGACAATGAATGTGATCCAAACCGTGCCTAACTT...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR GCA 90 bp TCAGACCTCAAGTTCTTAATGACTACAGTAGATAGAAACATGGGAAAGTACTTAATGAAAGAGAGAATCTaGATGATACACCAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SDLKFLMTTVDRNMGKYLMKERI*MIHQKL
Trigger: CAGCTTTTGGTGTATCATGCAGATTCTCTCTTTCAT...TAAGTACTTTCCCATGTTTCTATCTACTGTAGTCATTAAGAACTTGAGGTCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CCA 90 bp ATCATGTTTATTTTGGGAGTTCTTTGTCTTGAAGGGATCCCATCAAGTATAGCACACTTCAATTTCAGATaGAAGACAGGGTTGTTATTA +
Preference number: 4 (lower is better)
Translates to: IMFILGVLCLEGIPSSIAHFNFR*KTGLLL
Trigger: TAATAACAACCCTGTCTTCCATCTGAAATTGAAGTG...TGCTATACTTGATGGGATCCCTTCAAGACAAAGAACTCCCAAAATAAACATGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS GCA 90 bp CAGGGCAGGCCACTGCGGCCATGGAGCTGCCGCCCCCTCACTGCATaGCGAACCACTGCTCCTGGTCAGCCCACTGGGCCGCCTCACTGT +
Preference number: 5 (lower is better)
Translates to: QGRPLRPWSCRPLTA*RTTAPGQPTGPPHC
Trigger: ACAGTGAGGCGGCCCAGTGGGCTGACCAGGAGCAGTGGTTCGGCATGCAGTGAGGGGGCGGCAGCTCCATGGCCGCAGTGGCCTGCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000552087.1
CDS GCA 90 bp AGAGCAGGGCAGGCCACTGCGGCCATGGAGCTGCCGCCCCCTCACTaGATGCCGAACCACTGCTCCTGGTCAGCCCACTGGGCCGCCTCA +
Preference number: 5 (lower is better)
Translates to: RAGQATAAMELPPPH*MPNHCSWSAHWAAS
Trigger: TGAGGCGGCCCAGTGGGCTGACCAGGAGCAGTGGTTCGGCATGCAGTGAGGGGGCGGCAGCTCCATGGCCGCAGTGGCCTGCCCTGCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000552087.1
CDS GCA 90 bp CCACGGAAGTGCTCAGAGCAGGGCAGGCCACTGCGGCCATGGAGCTaGCGCCCCCTCACTGCATGCCGAACCACTGCTCCTGGTCAGCCC +
Preference number: 5 (lower is better)
Translates to: PRKCSEQGRPLRPWS*RPLTACRTTAPGQP
Trigger: GGGCTGACCAGGAGCAGTGGTTCGGCATGCAGTGAGGGGGCGGCAGCTCCATGGCCGCAGTGGCCTGCCCTGCTCTGAGCACTTCCGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000552087.1
CDS CCA 90 bp AGCCGCACGTTGGAGTGCAGCCCCGCGGCCGCCATGTCCCGCACGTaGTCTATCACATTCATCCTGCTCTGCAAAGCCGCGGGCAGCGGC +
Preference number: 5 (lower is better)
Translates to: SRTLECSPAAAMSRT*SITFILLCKAAGSG
Trigger: GCCGCTGCCCGCGGCTTTGCAGAGCAGGATGAATGTGATAGACCACGTGCGGGACATGGCGGCCGCGGGGCTGCACTCCAACGTGCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000464697.1
ENST00000552170.2
CDS GCA 90 bp GCCCCGCGGCCGCCATGTCCCGCACGTGGTCTATCACATTCATCCTaGTCTGCAAAGCCGCGGGCAGCGGCGGCAGCACTGACTCGAAAA +
Preference number: 5 (lower is better)
Translates to: APRPPCPARGLSHSS*SAKPRAAAAALTRK
Trigger: TTTTCGAGTCAGTGCTGCCGCCGCTGCCCGCGGCTTTGCAGAGCAGGATGAATGTGATAGACCACGTGCGGGACATGGCGGCCGCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000464697.1
CDS GCA 90 bp TTACTCATTGTAAGTAACAAGCTGCTGAGGAGCCGCACGTTGGAGTaGAGCCCCGCGGCCGCCATGTCCCGCACGTGGTCTATCACATTC +
Preference number: 5 (lower is better)
Translates to: LLIVSNKLLRSRTLE*SPAAAMSRTWSITF
Trigger: GAATGTGATAGACCACGTGCGGGACATGGCGGCCGCGGGGCTGCACTCCAACGTGCGGCTCCTCAGCAGCTTGTTACTTACAATGAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000464697.1
ENST00000552170.2
CDS CCA 90 bp CTTCTTCCCCACTCCCTTCCATGTCGTCCACATCCTCCTCCTGAGTaGCATCCGTGGGACTCTCCTCCTTCTCCATCTTCTGCATCCCCT +
Preference number: 5 (lower is better)
Translates to: LLPHSLPCRPHPPPE*HPWDSPPSPSSASP
Trigger: AGGGGATGCAGAAGATGGAGAAGGAGGAGAGTCCCACGGATGCCACTCAGGAGGAGGATGTGGACGACATGGAAGGGAGTGGGGAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000552087.1
CDS TCA 90 bp ACTGGCAGCCCTTGCCTCTTTCCACACCCACAGCGAGACGCCCTATaGGGAGGCCACCTTGAGAAGAGTCAACTCTCAACTCTTCATGCC +
Preference number: 5 (lower is better)
Translates to: TGSPCLFPHPQRDAL*GGHLEKSQLSTLHA
Trigger: GGCATGAAGAGTTGAGAGTTGACTCTTCTCAAGGTGGCCTCCTCATAGGGCGTCTCGCTGTGGGTGTGGAAAGAGGCAAGGGCTGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481473.5
CDS-3UTR CAA 90 bp GCCAGCATCATGTTTATTTTGGGAGTTCTTTGTCTTGAAGGGATCCCATCAAGTCTGAGGAGCCGCACGTaGGAGTGCAGCCCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: ASIMFILGVLCLEGIPSSLRSRT*ECSPAA
Trigger: GGCCGCGGGGCTGCACTCCAACGTGCGGCTCCTCAG...ACTTGATGGGATCCCTTCAAGACAAAGAACTCCCAAAATAAACATGATGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR CAA 90 bp TTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACCTGAGGAGCCGCACGTaGGAGTGCAGCCCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: LVTCPRSQVVKVVFKTSDLRSRT*ECSPAA
Trigger: GGCCGCGGGGCTGCACTCCAACGTGCGGCTCCTCAG...GTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CAA 90 bp ATGAAGTCACGACTAGGAATTGGGAGCGAGGGGGCAGAGACCCCTGCTGCAATCCCCGAAAGTGGATTATaGCTTCTTGGACTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: MKSRLGIGSEGAETPAAIPESGL*LLGLCP
Trigger: TGGGCAGAGTCCAAGAAGCAATAATCCACTTTCGGG...GATTGCAGCAGGGGTCTCTGCCCCCTCGCTCCCAATTCCTAGTCGTGACTTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS-3UTR CAA 90 bp CTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCACGGAAGTGCTCAGAGCAGGTGGATTATTGCTTCTaGGACTCTGCCCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: LLRAGSYGSFSPRKCSEQVDYCF*DSAHVP
Trigger: AGGAACATGGGCAGAGTCCAAGAAGCAATAATCCAC...CTGCTCTGAGCACTTCCGTGGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS TCA 90 bp GACAGCCAGAAACCACCCACGGTTCTGCATGCTGATCAGAGATATTaGAAAGGCGGCATCCAAGGTTCTCAACATCCTCTAGCCGCCCTT +
Preference number: 5 (lower is better)
Translates to: DSQKPPTVLHADQRY*KGGIQGSQHPLAAL
Trigger: AAGGGCGGCTAGAGGATGTTGAGAACCTTGGATGCCGCCTTTTCAATATCTCTGATCAGCATGCAGAACCGTGGGTGGTTTCTGGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000471602.6
ENST00000548234.1
CDS-3UTR CAA 90 bp ATGCTGAATCATTGTCCTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCACGGTGCTGCCATCCAACTaGGGAGATGACATTATCGTG +
Preference number: 5 (lower is better)
Translates to: MLNHCPSESRLLRFLQSTVLPSN*GDDIIV
Trigger: CACGATAATGTCATCTCCCAAGTTGGATGGCAGCAC...CGTGGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAGGACAATGATTCAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS GCA 90 bp GGCTCTCACCAGATGGTACTGATTGCTCTTGAGTTGTCACCAGTGTaGACAAAAGCATACGCTTTGATCCACACAGAGAGCCAGTCCAAG +
Preference number: 5 (lower is better)
Translates to: GSHQMVLIALELSPV*TKAYALIHTESQSK
Trigger: CTTGGACTGGCTCTCTGTGTGGATCAAAGCGTATGCTTTTGTGCACACTGGTGACAACTCAAGAGCAATCAGTACCATCTGGTGAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464697.1
CDS-3UTR CAA 90 bp ATGCTGAATCATTGTCCTTCTGAGAGCAGGCTCCTACGGTTCCTTCAGTCCACGAGAGACTTCTGGTCATaGGGGTCCAAACTTAGTGCT +
Preference number: 5 (lower is better)
Translates to: MLNHCPSESRLLRFLQSTRDFWS*GSKLSA
Trigger: AGCACTAAGTTTGGACCCCAATGACCAGAAGTCTCT...CGTGGACTGAAGGAACCGTAGGAGCCTGCTCTCAGAAGGACAATGATTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552087.1
CDS GCA 90 bp CCAGTCCAAGTTAGGCACGGTTTGGATCACATTCATTGTCATGGATaGCACCTCTGCCCCTTTTACAGAAAGGGACAACAAGCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: PVQVRHGLDHIHCHG*HLCPFYRKGQQALG
Trigger: TCCCAAAGCTTGTTGTCCCTTTCTGTAAAAGGGGCAGAGGTGGCATCCATGACAATGAATGTGATCCAAACCGTGCCTAACTTGGACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464697.1
CDS-3UTR CAA 90 bp CCACCTCTGCCCCTTTTACAGAAAGGGACAACAAGCCTAGAATGGCATCAAGGGTGGGAGTTCTTTGTCTaGAAGGGATCCCATCAAGTA +
Preference number: 5 (lower is better)
Translates to: PPLPLLQKGTTSLEWHQGWEFFV*KGSHQV
Trigger: TACTTGATGGGATCCCTTCAAGACAAAGAACTCCCA...CCCTTGATGCCATTCTAGGCTTGTTGTCCCTTTCTGTAAAAGGGGCAGAGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR CAA 90 bp AGGGACAACAAGCCTAGAATGGCATCAAGGGCTAATGGGCACTGCCTCAGCACCCCTTCTTGTACAGGTTaGCCAGCATCATGTTTATTT +
Preference number: 5 (lower is better)
Translates to: RDNKPRMASRANGHCLSTPSCTG*PASCLF
Trigger: AAATAAACATGATGCTGGCAAACCTGTACAAGAAGG...GGTGCTGAGGCAGTGCCCATTAGCCCTTGATGCCATTCTAGGCTTGTTGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR CAA 90 bp CACAAAAGCATACGCTTTGATCCACACAGAGAGCCAGTCCAAGTTAGGCACGGTTTTGGATCACATTCATaGTCATGGATGCCACCTCTG +
Preference number: 5 (lower is better)
Translates to: HKSIRFDPHREPVQVRHGFGSHS*SWMPPL
Trigger: CAGAGGTGGCATCCATGACAATGAATGTGATCCAAA...ACCGTGCCTAACTTGGACTGGCTCTCTGTGTGGATCAAAGCGTATGCTTTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS TCA 90 bp GCTACAAGGAAATCTCCTAGGATCCGATGCAGGACACAGTCACTCTaGTTAGCCAGTGCGTTCCTCAGCAAAGCAATTCCATCTTCATAT +
Preference number: 5 (lower is better)
Translates to: ATRKSPRIRCRTQSL*LASAFLSKAIPSSY
Trigger: ATATGAAGATGGAATTGCTTTGCTGAGGAACGCACTGGCTAATCAGAGTGACTGTGTCCTGCATCGGATCCTAGGAGATTTCCTTGTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450008.3
ENST00000452721.2
ENST00000455511.9
ENST00000481473.5
ENST00000486321.1
ENST00000552087.1
CDS TCA 90 bp GCTAGTGCCTACCTTAGTGCTATACTATACTGGTCCATTGCCTCCTaGTACTCATTGACAGCTACAAGGAAATCTCCTAGGATCCGATGC +
Preference number: 5 (lower is better)
Translates to: ASAYLSAILYWSIAS*YSLTATRKSPRIRC
Trigger: GCATCGGATCCTAGGAGATTTCCTTGTAGCTGTCAATGAGTATCAGGAGGCAATGGACCAGTATAGTATAGCACTAAGGTAGGCACTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450008.3
ENST00000452721.2
CDS GCA 90 bp AAACCCAAGGTTTTGCTGCCTCTTAACAAGCAGTTATTCTCCAGCTaGATTCGGTCACCTGTAGGGCTAGGTTTAAGATGGAAGACTCCT +
Preference number: 5 (lower is better)
Translates to: KPKVLLPLNKQLFSS*IRSPVGLGLRWKTP
Trigger: AGGAGTCTTCCATCTTAAACCTAGCCCTACAGGTGACCGAATGCAGCTGGAGAATAACTGCTTGTTAAGAGGCAGCAAAACCTTGGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452721.2
CDS GCA 90 bp GTTAGGCACGGTTTGGATCACATTCATTGTCATGGATGCCACCTCTaGCCCTTTTACAGAAAGGGACAACAAGCTTTGGGAGTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: VRHGLDHIHCHGCHL*PFYRKGQQALGVLC
Trigger: ACAAAGAACTCCCAAAGCTTGTTGTCCCTTTCTGTAAAAGGGGCAGAGGTGGCATCCATGACAATGAATGTGATCCAAACCGTGCCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464697.1
CDS TCA 90 bp TTGGGGTCCAAACTTAGTGCTATACTATACTGGTCCATTGCCTCCTaGTACTCATTGACAGCTACAAGGAAATCTCCTAGGATCCGATGC +
Preference number: 5 (lower is better)
Translates to: LGSKLSAILYWSIAS*YSLTATRKSPRIRC
Trigger: GCATCGGATCCTAGGAGATTTCCTTGTAGCTGTCAATGAGTATCAGGAGGCAATGGACCAGTATAGTATAGCACTAAGTTTGGACCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000486321.1
ENST00000552087.1
CDS TCA 90 bp ACTGAATTAACTTTGTGGCTCTCACCAGATGGTACTGATTGCTCTTaGGTTGTCACCAGTGTGCACAAAAGCATACGCTTTGATCCACAC +
Preference number: 5 (lower is better)
Translates to: TELTLWLSPDGTDCS*VVTSVHKSIRFDPH
Trigger: GTGTGGATCAAAGCGTATGCTTTTGTGCACACTGGTGACAACTCAAGAGCAATCAGTACCATCTGGTGAGAGCCACAAAGTTAATTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464697.1
CDS GCA 90 bp AAGAAGTGCTCTTCCCCAGAGAACTTGATGGATGTAGAAAAAGACTaGCTTCAAAGGCACCTTCAGTTTAGGGAAGGAAACAAGCACATG +
Preference number: 5 (lower is better)
Translates to: KKCSSPENLMDVEKD*LQRHLQFREGNKHM
Trigger: CATGTGCTTGTTTCCTTCCCTAAACTGAAGGTGCCTTTGAAGGCAGTCTTTTTCTACATCCATCAAGTTCTCTGGGGAAGAGCACTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452721.2
ENST00000486321.1
ENST00000547199.3
CDS-3UTR CAA 90 bp TTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACCCCGAAAGTGGATTATaGCTTCTTGGACTCTGCCCA +
Preference number: 5 (lower is better)
Translates to: LVTCPRSQVVKVVFKTSDPESGL*LLGLCP
Trigger: TGGGCAGAGTCCAAGAAGCAATAATCCACTTTCGGG...GTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CAA 90 bp ATATGTGTGTGTGGGCAAGGACAGAAGATGAGCTATACAAATGAACACAGATGTACAAAAGCATACGCTTaGATCCACACAGAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: ICVCGQGQKMSYTNEHRCTKAYA*IHTESQ
Trigger: CTGGCTCTCTGTGTGGATCAAAGCGTATGCTTTTGT...ACATCTGTGTTCATTTGTATAGCTCATCTTCTGTCCTTGCCCACACACACATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CAA 90 bp GCCAGCATCATGTTTATTTTGGGAGTTCTTTGTCTTGAAGGGATCCCATCAAGTCTGATTGCTCTTGAGTaGTCACCAGTGTGCACAAAA +
Preference number: 5 (lower is better)
Translates to: ASIMFILGVLCLEGIPSSLIALE*SPVCTK
Trigger: TTTTGTGCACACTGGTGACAACTCAAGAGCAATCAG...ACTTGATGGGATCCCTTCAAGACAAAGAACTCCCAAAATAAACATGATGCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR CAA 90 bp TTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACGTGGATTATTGCTTCTaGGACTCTGCCCATGTTCCT +
Preference number: 5 (lower is better)
Translates to: LVTCPRSQVVKVVFKTSDVDYCF*DSAHVP
Trigger: AGGAACATGGGCAGAGTCCAAGAAGCAATAATCCAC...GTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CAA 90 bp AGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAATGGGAGTTCTTTGTCTaGAAGGGATCCCATCAAGTA +
Preference number: 5 (lower is better)
Translates to: RKCVSNLPKITGGEGSIQWEFFV*KGSHQV
Trigger: TACTTGATGGGATCCCTTCAAGACAAAGAACTCCCA...TTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAACACATTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CAA 90 bp GTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGTTTGGATCACATTCATaGTCATGGATGCCACCTCTG +
Preference number: 5 (lower is better)
Translates to: VARYRQGNVLVTCPRSQVFGSHS*SWMPPL
Trigger: CAGAGGTGGCATCCATGACAATGAATGTGATCCAAA...CACCTGTGATCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CAA 90 bp GTTCTTTGTCTTGAAGGGATCCCATCAAGTATAGCAATGGCATCTTTATCTTGTACAAAAGCATACGCTTaGATCCACACAGAGAGCCAG +
Preference number: 5 (lower is better)
Translates to: VLCLEGIPSSIAMASLSCTKAYA*IHTESQ
Trigger: CTGGCTCTCTGTGTGGATCAAAGCGTATGCTTTTGT...ACAAGATAAAGATGCCATTGCTATACTTGATGGGATCCCTTCAAGACAAAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS GCA 90 bp CCAGTTGAAGGTCTCACTTTTGAAGTTTTACTTAGCGCTTTCTTCTaGTGTAAAGCCATGGTATACTTACTCACAGCATTCCGATATTCC +
Preference number: 5 (lower is better)
Translates to: PVEGLTFEVLLSAFF*CKAMVYLLTAFRYS
Trigger: GGAATATCGGAATGCTGTGAGTAAGTATACCATGGCTTTACAGCAGAAGAAAGCGCTAAGTAAAACTTCAAAAGTGAGACCTTCAACTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000464697.1
ENST00000546720.5
CDS GCA 90 bp GCCATATACATCCATTCCTTTTATCAGATAAGGATCCAACATCTGTaGCTGTTCAAACTTGAGGACAGAGTTTTTATTGTCTCCAGCTCT +
Preference number: 5 (lower is better)
Translates to: AIYIHSFYQIRIQHL*LFKLEDRVFIVSSS
Trigger: AGAGCTGGAGACAATAAAAACTCTGTCCTCAAGTTTGAACAGGCACAGATGTTGGATCCTTATCTGATAAAAGGAATGGATGTATATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000548234.1
CDS-3UTR CAA 90 bp AGGAAATGTGTTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAATGCAGAATTTCCAGTaGAAGGTCTCACTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: RKCVSNLPKITGGEGSIQMQNFQ*KVSLLK
Trigger: CTTCAAAAGTGAGACCTTCAACTGGAAATTCTGCAT...TTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAACACATTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CAA 90 bp TTAGTAACTTGCCCAAGATCACAGGTGGTGAAGGTAGTATTCAAAACTTCAGACTGTGCCTGTTCAAACTaGAGGACAGAGTTTTTATTG +
Preference number: 5 (lower is better)
Translates to: LVTCPRSQVVKVVFKTSDCACSN*RTEFLL
Trigger: CAATAAAAACTCTGTCCTCAAGTTTGAACAGGCACA...GTCTGAAGTTTTGAATACTACCTTCACCACCTGTGATCTTGGGCAAGTTACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CAA 90 bp ATGTTTATTTTGGGAGTTCTTTGTCTTGAAGGGATCCCATCAAGTATAGCAATGCAAGTTAGGCACGGTTaGGATCACATTCATTGTCAT +
Preference number: 5 (lower is better)
Translates to: MFILGVLCLEGIPSSIAMQVRHG*DHIHCH
Trigger: ATGACAATGAATGTGATCCAAACCGTGCCTAACTTG...CATTGCTATACTTGATGGGATCCCTTCAAGACAAAGAACTCCCAAAATAAACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR CAA 90 bp TCAGACCTCAAGTTCTTAATGACTACAGTAGATAGAAACATGGGAAAGTACTTACTGATTGCTCTTGAGTaGTCACCAGTGTGCACAAAA +
Preference number: 5 (lower is better)
Translates to: SDLKFLMTTVDRNMGKYLLIALE*SPVCTK
Trigger: TTTTGTGCACACTGGTGACAACTCAAGAGCAATCAG...TAAGTACTTTCCCATGTTTCTATCTACTGTAGTCATTAAGAACTTGAGGTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS CCA 90 bp ACAAAGAATAAAGCAGAAGTCTCTCAGTACCAACAAATAACTCTGTaGTTGCAGTTCTTCAGAACACAACATACGCTACATGGTGTTAAA +
Preference number: 5 (lower is better)
Translates to: TKNKAEVSQYQQITL*LQFFRTQHTLHGVK
Trigger: TTTAACACCATGTAGCGTATGTTGTGTTCTGAAGAACTGCAACCACAGAGTTATTTGTTGGTACTGAGAGACTTCTGCTTTATTCTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548234.1
CDS-3UTR CAA 90 bp ATTACTATTATTATTCTGCTTTCAACCATGGACACAAAGTGTGTGTGTGTTTCCAAATGTGTTAGTAACTaGCCCAAGATCACAGGTGGT +
Preference number: 5 (lower is better)
Translates to: ITIIILLSTMDTKCVCVSKCVSN*PKITGG
Trigger: ACCACCTGTGATCTTGGGCAAGTTACTAACACATTT...GGAAACACACACACACTTTGTGTCCATGGTTGAAAGCAGAATAATAATAGTAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CAA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGATGGAAGACACTGACTTaGTGGAGTAGATGCAGAATT +
Preference number: 5 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRWKTLT*WSRCRI
Trigger: AATTCTGCATCTACTCCACAAAGTCAGTGTCTTCCA...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CAA 90 bp TCAGACCTCAAGTTCTTAATGACTACAGTAGATAGAAACATGGGAAAGTACTTACAAGTTAGGCACGGTTaGGATCACATTCATTGTCAT +
Preference number: 5 (lower is better)
Translates to: SDLKFLMTTVDRNMGKYLQVRHG*DHIHCH
Trigger: ATGACAATGAATGTGATCCAAACCGTGCCTAACTTG...TAAGTACTTTCCCATGTTTCTATCTACTGTAGTCATTAAGAACTTGAGGTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CAA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGAAGGACAGAGTTTTTATaGTCTCCAGCTCTGAAGTAC +
Preference number: 5 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRRTEFL*SPALKY
Trigger: GTACTTCAGAGCTGGAGACAATAAAAACTCTGTCCT...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS CCA 90 bp TCACTTTTGAAGTTTTACTTAGCGCTTTCTTCTGCTGTAAAGCCATaGTATACTTACTCACAGCATTCCGATATTCCTTATCATGAAAGA +
Preference number: 5 (lower is better)
Translates to: SLLKFYLALSSAVKP*YTYSQHSDIPYHER
Trigger: TCTTTCATGATAAGGAATATCGGAATGCTGTGAGTAAGTATACCATGGCTTTACAGCAGAAGAAAGCGCTAAGTAAAACTTCAAAAGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000464697.1
ENST00000546720.5
CDS-3UTR CAA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGACCTTCTTGTACAGGTTaGCCAGCATCATGTTTATTT +
Preference number: 5 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRPSCTG*PASCLF
Trigger: AAATAAACATGATGCTGGCAAACCTGTACAAGAAGG...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS-3UTR CAA 90 bp ATCATGTTTATTTTGGGAGTTCTTTGTCTTGAAGGGATCCCATCAAGTATAGCAAGATGGAAGACAGGGTaGTTATTACTCATTGTAAGT +
Preference number: 5 (lower is better)
Translates to: IMFILGVLCLEGIPSSIARWKTG*LLLIVS
Trigger: ACTTACAATGAGTAATAACAACCCTGTCTTCCATCT...TGCTATACTTGATGGGATCCCTTCAAGACAAAGAACTCCCAAAATAAACATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552170.2
CDS-3UTR CAA 90 bp TCTAATAAGGTAGCTAGATATAGACAAGGAAATGTGTTAGTAACTTGCCCAAGATTGAAGGTCTCACTTTaGAAGTTTTACTTAGCGCTT +
Preference number: 5 (lower is better)
Translates to: SNKVARYRQGNVLVTCPRLKVSL*KFYLAL
Trigger: AAGCGCTAAGTAAAACTTCAAAAGTGAGACCTTCAA...TCTTGGGCAAGTTACTAACACATTTCCTTGTCTATATCTAGCTACCTTATTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000450008.3
CDS GCA 72 bp CCACTGCGGCCATGGAGCTGCCGCCCCCTCACTGCATaGCGAACCACTGCTCCTGGTCAGCCCACTGGGCCG +
Preference number: 6 (lower is better)
Translates to: PLRPWSCRPLTA*RTTAPGQPTGP
Trigger: CGGCCCAGTGGGCTGACCAGGAGCAGTGGTTCGGCATGCAGTGAGGGGGCGGCAGCTCCATGGCCGCAGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000552087.1
CDS GCA 72 bp CAGGCCACTGCGGCCATGGAGCTGCCGCCCCCTCACTaGATGCCGAACCACTGCTCCTGGTCAGCCCACTGG +
Preference number: 6 (lower is better)
Translates to: QATAAMELPPPH*MPNHCSWSAHW
Trigger: CCAGTGGGCTGACCAGGAGCAGTGGTTCGGCATGCAGTGAGGGGGCGGCAGCTCCATGGCCGCAGTGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000552087.1
CDS GCA 72 bp TGCTCAGAGCAGGGCAGGCCACTGCGGCCATGGAGCTaGCGCCCCCTCACTGCATGCCGAACCACTGCTCCT +
Preference number: 6 (lower is better)
Translates to: CSEQGRPLRPWS*RPLTACRTTAP
Trigger: AGGAGCAGTGGTTCGGCATGCAGTGAGGGGGCGGCAGCTCCATGGCCGCAGTGGCCTGCCCTGCTCTGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000552087.1
CDS GCA 72 bp CCGCCATGTCCCGCACGTGGTCTATCACATTCATCCTaGTCTGCAAAGCCGCGGGCAGCGGCGGCAGCACTG +
Preference number: 6 (lower is better)
Translates to: PPCPARGLSHSS*SAKPRAAAAAL
Trigger: CAGTGCTGCCGCCGCTGCCCGCGGCTTTGCAGAGCAGGATGAATGTGATAGACCACGTGCGGGACATGGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000464697.1
CDS GCA 72 bp GTAAGTAACAAGCTGCTGAGGAGCCGCACGTTGGAGTaGAGCCCCGCGGCCGCCATGTCCCGCACGTGGTCT +
Preference number: 6 (lower is better)
Translates to: VSNKLLRSRTLE*SPAAAMSRTWS
Trigger: AGACCACGTGCGGGACATGGCGGCCGCGGGGCTGCACTCCAACGTGCGGCTCCTCAGCAGCTTGTTACTTAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000464697.1
ENST00000552170.2
CDS CCA 72 bp TTGGAGTGCAGCCCCGCGGCCGCCATGTCCCGCACGTaGTCTATCACATTCATCCTGCTCTGCAAAGCCGCG +
Preference number: 6 (lower is better)
Translates to: LECSPAAAMSRT*SITFILLCKAA
Trigger: CGCGGCTTTGCAGAGCAGGATGAATGTGATAGACCACGTGCGGGACATGGCGGCCGCGGGGCTGCACTCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000464697.1
ENST00000552170.2
CDS CAA 72 bp CTCATTGTAAGTAACAAGCTGCTGAGGAGCCGCACGTaGGAGTGCAGCCCCGCGGCCGCCATGTCCCGCACG +
Preference number: 6 (lower is better)
Translates to: LIVSNKLLRSRT*ECSPAAAMSRT
Trigger: CGTGCGGGACATGGCGGCCGCGGGGCTGCACTCCAACGTGCGGCTCCTCAGCAGCTTGTTACTTACAATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000464697.1
ENST00000552170.2
CDS TCA 72 bp TCCCCACTCCCTTCCATGTCGTCCACATCCTCCTCCTaGGTGGCATCCGTGGGACTCTCCTCCTTCTCCATC +
Preference number: 6 (lower is better)
Translates to: SPLPSMSSTSSS*VASVGLSSFSI
Trigger: GATGGAGAAGGAGGAGAGTCCCACGGATGCCACTCAGGAGGAGGATGTGGACGACATGGAAGGGAGTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000552087.1
CDS CAA 90 bp TTGTTATTACTCATTGTAAGTAACAAGCTGCTGAGGAGCCGCACGTaGGAGTGCAGCCCCGCGGCCGCCATGTCCCGCACGTGGTCTATC +
Preference number: 6 (lower is better)
Translates to: LLLLIVSNKLLRSRT*ECSPAAAMSRTWSI
Trigger: GATAGACCACGTGCGGGACATGGCGGCCGCGGGGCTGCACTCCAACGTGCGGCTCCTCAGCAGCTTGTTACTTACAATGAGTAATAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000464697.1
ENST00000552170.2
CDS GCA 72 bp GTGGCATCCGTGGGACTCTCCTCCTTCTCCATCTTCTaGATCCCCTCTAGAGACTTCTGGTCATTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: VASVGLSSFSIF*IPSRDFWSLGS
Trigger: GGACCCCAATGACCAGAAGTCTCTAGAGGGGATGCAGAAGATGGAGAAGGAGGAGAGTCCCACGGATGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000486321.1
ENST00000552087.1
CDS CCA 72 bp CACTCCCTTCCATGTCGTCCACATCCTCCTCCTGAGTaGCATCCGTGGGACTCTCCTCCTTCTCCATCTTCT +
Preference number: 6 (lower is better)
Translates to: HSLPCRPHPPPE*HPWDSPPSPSS
Trigger: AGAAGATGGAGAAGGAGGAGAGTCCCACGGATGCCACTCAGGAGGAGGATGTGGACGACATGGAAGGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000552087.1
CDS GCA 72 bp CCTTGGCTCCTAAATAGAGGGCCCGGGAGTAGCGTTTaGTATAGAAGCTGTGACAGCCAGAAACCACCCACG +
Preference number: 6 (lower is better)
Translates to: PWLLNRGPGSSV*YRSCDSQKPPT
Trigger: CGTGGGTGGTTTCTGGCTGTCACAGCTTCTATAGCAAACGCTACTCCCGGGCCCTCTATTTAGGAGCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000471602.6
ENST00000548234.1
CDS CAA 72 bp CACACCCACAGCGAGACGCCCTATGAGGAGGCCACCTaGAGAAGAGTCAACTCTCAACTCTTCATGCCAGTA +
Preference number: 6 (lower is better)
Translates to: HTHSETPYEEAT*RRVNSQLFMPV
Trigger: TACTGGCATGAAGAGTTGAGAGTTGACTCTTCTCAAGGTGGCCTCCTCATAGGGCGTCTCGCTGTGGGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481473.5
CDS CCA 72 bp AAGCGACAAGGTGCGAGCCGTATGGCCTCCCGAAAGTaGATTATTGCTTCTTGGACTCTGCCCATGTTCCTA +
Preference number: 6 (lower is better)
Translates to: KRQGASRMASRK*IIASWTLPMFL
Trigger: TAGGAACATGGGCAGAGTCCAAGAAGCAATAATCCACTTTCGGGAGGCCATACGGCTCGCACCTTGTCGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000471602.6
ENST00000548234.1
ENST00000552087.1
CDS CCA 72 bp GTAGCAGAGCTTGAACACTATTACTGTTCAGCTGAATaGCCTTGGCTCCTAAATAGAGGGCCCGGGAGTAGC +
Preference number: 6 (lower is better)
Translates to: VAELEHYYCSAE*PWLLNRGPGSS
Trigger: GCTACTCCCGGGCCCTCTATTTAGGAGCCAAGGCCATTCAGCTGAACAGTAATAGTGTTCAAGCTCTGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000471602.6
ENST00000548234.1
CDS GCA 72 bp ATAGAAGCTGTGACAGCCAGAAACCACCCACGGTTCTaGATGCTGATCAGAGATATTGAAAAGGCGGCATCC +
Preference number: 6 (lower is better)
Translates to: IEAVTARNHPRF*MLIRDIEKAAS
Trigger: GGATGCCGCCTTTTCAATATCTCTGATCAGCATGCAGAACCGTGGGTGGTTTCTGGCTGTCACAGCTTCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000471602.6
ENST00000548234.1
CDS TCA 72 bp AAATCTCCTAGGATCCGATGCAGGACACAGTCACTCTaGTTAGCCAGTGCGTTCCTCAGCAAAGCAATTCCA +
Preference number: 6 (lower is better)
Translates to: KSPRIRCRTQSL*LASAFLSKAIP
Trigger: TGGAATTGCTTTGCTGAGGAACGCACTGGCTAATCAGAGTGACTGTGTCCTGCATCGGATCCTAGGAGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450008.3
ENST00000452721.2
ENST00000455511.9
ENST00000481473.5
ENST00000486321.1
ENST00000552087.1
CDS TCA 72 bp AAACCACCCACGGTTCTGCATGCTGATCAGAGATATTaGAAAGGCGGCATCCAAGGTTCTCAACATCCTCTA +
Preference number: 6 (lower is better)
Translates to: KPPTVLHADQRY*KGGIQGSQHPL
Trigger: TAGAGGATGTTGAGAACCTTGGATGCCGCCTTTTCAATATCTCTGATCAGCATGCAGAACCGTGGGTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000471602.6
ENST00000548234.1
CDS CAA 72 bp TCCATCTTCTGCATCCCCTCTAGAGACTTCTGGTCATaGGGGTCCAAACTTAGTGCTATACTATACTGGTCC +
Preference number: 6 (lower is better)
Translates to: SIFCIPSRDFWS*GSKLSAILYWS
Trigger: GGACCAGTATAGTATAGCACTAAGTTTGGACCCCAATGACCAGAAGTCTCTAGAGGGGATGCAGAAGATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000486321.1
ENST00000552087.1
CDS CAA 72 bp TGTGGCTCTCACCAGATGGTACTGATTGCTCTTGAGTaGTCACCAGTGTGCACAAAAGCATACGCTTTGATC +
Preference number: 6 (lower is better)
Translates to: CGSHQMVLIALE*SPVCTKAYALI
Trigger: GATCAAAGCGTATGCTTTTGTGCACACTGGTGACAACTCAAGAGCAATCAGTACCATCTGGTGAGAGCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464697.1
CDS CAA 90 bp GGATCCAACATCTGTGCCTGTTCAAACTTGAGGACAGAGTTTTTATaGTCTCCAGCTCTGAAGTACAGATCTGCCAAGCTTCCCAATAGG +
Preference number: 6 (lower is better)
Translates to: GSNICACSNLRTEFL*SPALKYRSAKLPNR
Trigger: CCTATTGGGAAGCTTGGCAGATCTGTACTTCAGAGCTGGAGACAATAAAAACTCTGTCCTCAAGTTTGAACAGGCACAGATGTTGGATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000546720.5
ENST00000548234.1
CDS TCA 72 bp ACTTTGTGGCTCTCACCAGATGGTACTGATTGCTCTTaGGTTGTCACCAGTGTGCACAAAAGCATACGCTTT +
Preference number: 6 (lower is better)
Translates to: TLWLSPDGTDCS*VVTSVHKSIRF
Trigger: AAAGCGTATGCTTTTGTGCACACTGGTGACAACTCAAGAGCAATCAGTACCATCTGGTGAGAGCCACAAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464697.1
CDS GCA 72 bp GATCCGATGCAGGACACAGTCACTCTGATTAGCCAGTaGGTTCCTCAGCAAAGCAATTCCATCTTCATATTT +
Preference number: 6 (lower is better)
Translates to: DPMQDTVTLISQ*VPQQSNSIFIF
Trigger: AAATATGAAGATGGAATTGCTTTGCTGAGGAACGCACTGGCTAATCAGAGTGACTGTGTCCTGCATCGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000450008.3
ENST00000452721.2
ENST00000455511.9
ENST00000471602.6
ENST00000481473.5
ENST00000486321.1
ENST00000552087.1
CDS CCA 72 bp TCCTTCTCCATCTTCTGCATCCCCTCTAGAGACTTCTaGTCATTGGGGTCCAAACTTAGTGCTATACTATAC +
Preference number: 6 (lower is better)
Translates to: SFSIFCIPSRDF*SLGSKLSAILY
Trigger: GTATAGTATAGCACTAAGTTTGGACCCCAATGACCAGAAGTCTCTAGAGGGGATGCAGAAGATGGAGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000486321.1
ENST00000552087.1
CDS TCA 72 bp TCTGTCATATGGCCAAGAGATCAAAGTAGTGAGAGATaGTGTTCCCAACAAAACCCAAGGTTTTGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: SVIWPRDQSSER*CSQQNPRFCCL
Trigger: GAGGCAGCAAAACCTTGGGTTTTGTTGGGAACATCATCTCTCACTACTTTGATCTCTTGGCCATATGACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000452721.2
ENST00000547199.3
CDS GCA 72 bp TCTTCCCCAGAGAACTTGATGGATGTAGAAAAAGACTaGCTTCAAAGGCACCTTCAGTTTAGGGAAGGAAAC +
Preference number: 6 (lower is better)
Translates to: SSPENLMDVEKD*LQRHLQFREGN
Trigger: GTTTCCTTCCCTAAACTGAAGGTGCCTTTGAAGGCAGTCTTTTTCTACATCCATCAAGTTCTCTGGGGAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000452721.2
ENST00000486321.1
ENST00000547199.3
CDS TCA 72 bp TCAATGCCATTACCATTCCAACCCATGCTTCCACTCTaGCAGCTCTCCAAATTGCTAACCTTCAAAGTTTCA +
Preference number: 6 (lower is better)
Translates to: SMPLPFQPMLPL*QLSKLLTFKVS
Trigger: TGAAACTTTGAAGGTTAGCAATTTGGAGAGCTGTCAGAGTGGAAGCATGGGTTGGAATGGTAATGGCATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000452721.2
ENST00000486321.1
CDS TCA 72 bp TACCTTAGTGCTATACTATACTGGTCCATTGCCTCCTaGTACTCATTGACAGCTACAAGGAAATCTCCTAGG +
Preference number: 6 (lower is better)
Translates to: YLSAILYWSIAS*YSLTATRKSPR
Trigger: CCTAGGAGATTTCCTTGTAGCTGTCAATGAGTATCAGGAGGCAATGGACCAGTATAGTATAGCACTAAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450008.3
ENST00000452721.2
CDS TCA 72 bp CAGAAAGGGACAACAAGCTTTGGGAGTTCTTTGTCTTaGAGGGATCCCATCAAGTATAGCAATGGCATCTTT +
Preference number: 6 (lower is better)
Translates to: QKGTTSFGSSLS*RDPIKYSNGIF
Trigger: AAAGATGCCATTGCTATACTTGATGGGATCCCTTCAAGACAAAGAACTCCCAAAGCTTGTTGTCCCTTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464697.1
CDS CAA 72 bp ATCTGTGCCTGTTCAAACTTGAGGACAGAGTTTTTATaGTCTCCAGCTCTGAAGTACAGATCTGCCAAGCTT +
Preference number: 6 (lower is better)
Translates to: ICACSNLRTEFL*SPALKYRSAKL
Trigger: AAGCTTGGCAGATCTGTACTTCAGAGCTGGAGACAATAAAAACTCTGTCCTCAAGTTTGAACAGGCACAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000546720.5
ENST00000548234.1
CDS TCA 72 bp AAACTTAGTGCTATACTATACTGGTCCATTGCCTCCTaGTACTCATTGACAGCTACAAGGAAATCTCCTAGG +
Preference number: 6 (lower is better)
Translates to: KLSAILYWSIAS*YSLTATRKSPR
Trigger: CCTAGGAGATTTCCTTGTAGCTGTCAATGAGTATCAGGAGGCAATGGACCAGTATAGTATAGCACTAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000455511.9
ENST00000481473.5
ENST00000486321.1
ENST00000552087.1
CDS GCA 72 bp AGCATTCCGATATTCCTTATCATGAAAGAGAGAATCTaGATGATACACCAAAAGCTGGTACTTCTGAGGTGG +
Preference number: 6 (lower is better)
Translates to: SIPIFLIMKERI*MIHQKLVLLRW
Trigger: CCACCTCAGAAGTACCAGCTTTTGGTGTATCATGCAGATTCTCTCTTTCATGATAAGGAATATCGGAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000464697.1
ENST00000546720.5
CDS CCA 72 bp AAAGCAGAAGTCTCTCAGTACCAACAAATAACTCTGTaGTTGCAGTTCTTCAGAACACAACATACGCTACAT +
Preference number: 6 (lower is better)
Translates to: KAEVSQYQQITL*LQFFRTQHTLH
Trigger: ATGTAGCGTATGTTGTGTTCTGAAGAACTGCAACCACAGAGTTATTTGTTGGTACTGAGAGACTTCTGCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548234.1
CDS GCA 72 bp ATCCATTCCTTTTATCAGATAAGGATCCAACATCTGTaGCTGTTCAAACTTGAGGACAGAGTTTTTATTGTC +
Preference number: 6 (lower is better)
Translates to: IHSFYQIRIQHL*LFKLEDRVFIV
Trigger: GACAATAAAAACTCTGTCCTCAAGTTTGAACAGGCACAGATGTTGGATCCTTATCTGATAAAAGGAATGGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000548234.1
CDS CCA 72 bp AAGTTTTACTTAGCGCTTTCTTCTGCTGTAAAGCCATaGTATACTTACTCACAGCATTCCGATATTCCTTAT +
Preference number: 6 (lower is better)
Translates to: KFYLALSSAVKP*YTYSQHSDIPY
Trigger: ATAAGGAATATCGGAATGCTGTGAGTAAGTATACCATGGCTTTACAGCAGAAGAAAGCGCTAAGTAAAACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450008.3
ENST00000455511.9
ENST00000464697.1
ENST00000546720.5
CDS TCA 72 bp ACGCTACATGGTGTTAAAGGTAATGTCATTCACAAGTaGCACCTATTTATTACTCAAGTAAACGACTTTGCA +
Preference number: 6 (lower is better)
Translates to: TLHGVKGNVIHK*HLFITQVNDFA
Trigger: TGCAAAGTCGTTTACTTGAGTAATAAATAGGTGTCACTTGTGAATGACATTACCTTTAACACCATGTAGCGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548234.1