RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMFR (Homo sapiens)

Ensembl gene IDs: ENSG00000159461

Ensembl transcript IDs: ENST00000290649.10, ENST00000492830.5, ENST00000563285.1, ENST00000563664.1, ENST00000564283.1, ENST00000565445.5, ENST00000566334.1, ENST00000566757.1, ENST00000567738.1, ENST00000568325.1, ENST00000568657.1, ENST00000568762.1

Found 348 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTaGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGC +
Preference number: 1 (lower is better)
Translates to: SGNAVKPAFPWSGQN*DRPPPVSRAQGAGG
Trigger: GCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CCA 90 bp GCGGGCTCACACTGTGCGCCTCCCCCACACTCTTCCCACTGGGTGTaGTGCTCAGGACACCTGCATTTGTGGGACGTACGCATGAGGCAG +
Preference number: 1 (lower is better)
Translates to: AGSHCAPPPHSSHWV*CSGHLHLWDVRMRQ
Trigger: CTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCACACCCAGTGGGAAGAGTGTGGGGGAGGCGCACAGTGTGAGCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR GCA 90 bp GCATTTGTGGGACGTACGCATGAGGCAGGAGTAGAAGCTGCCTGCTaGAGGCAGGCGACTGCTCACTTCCTCCTGATCGTCCCCCACCCC +
Preference number: 1 (lower is better)
Translates to: AFVGRTHEAGVEAAC*RQATAHFLLIVPHP
Trigger: GGGGTGGGGGACGATCAGGAGGAAGTGAGCAGTCGCCTGCCTGCAGCAGGCAGCTTCTACTCCTGCCTCATGCGTACGTCCCACAAATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR GCA 90 bp GGCTCACACTGTGCGCCTCCCCCACACTCTTCCCACTGGGTGTGGTaGTCAGGACACCTGCATTTGTGGGACGTACGCATGAGGCAGGAG +
Preference number: 1 (lower is better)
Translates to: GSHCAPPPHSSHWVW*SGHLHLWDVRMRQE
Trigger: CTCCTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCACACCCAGTGGGAAGAGTGTGGGGGAGGCGCACAGTGTGAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR GCA 90 bp CCTGCATTTGTGGGACGTACGCATGAGGCAGGAGTAGAAGCTGCCTaGTGCAGGCAGGCGACTGCTCACTTCCTCCTGATCGTCCCCCAC +
Preference number: 1 (lower is better)
Translates to: PAFVGRTHEAGVEAA*CRQATAHFLLIVPH
Trigger: GTGGGGGACGATCAGGAGGAAGTGAGCAGTCGCCTGCCTGCAGCAGGCAGCTTCTACTCCTGCCTCATGCGTACGTCCCACAAATGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR TCA 90 bp ACTGGGTGTGGTGCTCAGGACACCTGCATTTGTGGGACGTACGCATaGGGCAGGAGTAGAAGCTGCCTGCTGCAGGCAGGCGACTGCTCA +
Preference number: 1 (lower is better)
Translates to: TGCGAQDTCICGTYA*GRSRSCLLQAGDCS
Trigger: TGAGCAGTCGCCTGCCTGCAGCAGGCAGCTTCTACTCCTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCACACCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR GCA 90 bp CCCTCCTCTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATaGCCTGCTGGCTCAGGGGTGCATGAGCCCGTGGGTCTGGCCTCT +
Preference number: 1 (lower is better)
Translates to: PSSAPGIEPRVPFPR*PAGSGVHEPVGLAS
Trigger: AGAGGCCAGACCCACGGGCTCATGCACCCCTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAGAGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CCA 90 bp TTCCAAGATGCCCTGCTGGCTCAGGGGTGCATGAGCCCGTGGGTCTaGCCTCTGGCACAGTCTACATGCTTCCACAACAACGACAGCAGT +
Preference number: 1 (lower is better)
Translates to: FQDALLAQGCMSPWV*PLAQSTCFHNNDSS
Trigger: ACTGCTGTCGTTGTTGTGGAAGCATGTAGACTGTGCCAGAGGCCAGACCCACGGGCTCATGCACCCCTGAGCCAGCAGGGCATCTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR TCA 90 bp ACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGGGGTGCATaGGCCCGTGGGTCTGGCCTCTGGCACAGTCTACATGCTTCCACA +
Preference number: 1 (lower is better)
Translates to: TKSSFSKMPCWLRGA*ARGSGLWHSLHAST
Trigger: TGTGGAAGCATGTAGACTGTGCCAGAGGCCAGACCCACGGGCTCATGCACCCCTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR GCA 90 bp TCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGGGGTaGATGAGCCCGTGGGTCTGGCCTCTGGCACAGTCTACATGCTTC +
Preference number: 1 (lower is better)
Translates to: SNQEFLFQDALLAQG*MSPWVWPLAQSTCF
Trigger: GAAGCATGTAGACTGTGCCAGAGGCCAGACCCACGGGCTCATGCACCCCTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CCA 90 bp CCACATGCTTTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATaGAGCGGGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCA +
Preference number: 1 (lower is better)
Translates to: PHALYSGNAVKPAFP*SGQNWDRPPPVSRA
Trigger: TGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAAAGCATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CCA 90 bp TTCCTTTTCCAAGATGCCCTGCTGGCTCAGGGGTGCATGAGCCCGTaGGTCTGGCCTCTGGCACAGTCTACATGCTTCCACAACAACGAC +
Preference number: 1 (lower is better)
Translates to: FLFQDALLAQGCMSP*VWPLAQSTCFHNND
Trigger: GTCGTTGTTGTGGAAGCATGTAGACTGTGCCAGAGGCCAGACCCACGGGCTCATGCACCCCTGAGCCAGCAGGGCATCTTGGAAAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CCA 90 bp CAGGTCCAGACGGGACAAGGAAATGCTGAGAGGGGAGGGGACCCATaGGGCACACTCATGAGATGCAGGAGCACCAGAGTTCACGGAAAT +
Preference number: 1 (lower is better)
Translates to: QVQTGQGNAERGGDP*GTLMRCRSTRVHGN
Trigger: ATTTCCGTGAACTCTGGTGCTCCTGCATCTCATGAGTGTGCCCCATGGGTCCCCTCCCCTCTCAGCATTTCCTTGTCCCGTCTGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CCA 90 bp GATGCAGGAGCACCAGAGTTCACGGAAATCAAGCCGGCTTTGGACTaGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGACAGAAAGGG +
Preference number: 1 (lower is better)
Translates to: DAGAPEFTEIKPALD*RLGKSVPDVVGQKG
Trigger: CCCTTTCTGTCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCCAAAGCCGGCTTGATTTCCGTGAACTCTGGTGCTCCTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR GCA 90 bp CAGGGGTGCATGAGCCCGTGGGTCTGGCCTCTGGCACAGTCTACATaGTTCCACAACAACGACAGCAGTTTGATAACAGATGTTACCCCA +
Preference number: 1 (lower is better)
Translates to: QGCMSPWVWPLAQST*FHNNDSSLITDVTP
Trigger: TGGGGTAACATCTGTTATCAAACTGCTGTCGTTGTTGTGGAAGCATGTAGACTGTGCCAGAGGCCAGACCCACGGGCTCATGCACCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR TCA 90 bp TGGGCCCTCTCCAAGGCAGGTAGGTTCACACCTTACCTTCTCTGCTaGATTAAACCAGGAATAACACAGCTAGGAAAACGCAGTGCTCCC +
Preference number: 1 (lower is better)
Translates to: WALSKAGRFTPYLLC*IKPGITQLGKRSAP
Trigger: GGGAGCACTGCGTTTTCCTAGCTGTGTTATTCCTGGTTTAATTCAGCAGAGAAGGTAAGGTGTGAACCTACCTGCCTTGGAGAGGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR GCA 90 bp CAGCTGTCCAAACACTATAAGACCACATGCTTTATACAGCGGCAATaGAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGGACAG +
Preference number: 1 (lower is better)
Translates to: QLSKHYKTTCFIQRQ*SQARFSMERAELGQ
Trigger: CTGTCCCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAAAGCATGTGGTCTTATAGTGTTTGGACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CAA 90 bp CAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATaGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: QRQCSQARFSMERAE*GQASSSQSGTGRRR
Trigger: CCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp ATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCCCCGGAGTAGAAGCTGCCTaGTGCAGGCAGGCGACTGCT +
Preference number: 2 (lower is better)
Translates to: ITDVTPRRGGGLTLCASPGVEAA*CRQATA
Trigger: AGCAGTCGCCTGCCTGCAGCAGGCAGCTTCTACTCC...GGGGGAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CCA 90 bp GGACTGGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGACAGAAAGGGGTGACTGTTACCCCACGACGTaGGGGCGGGCTCACACTGTG +
Preference number: 2 (lower is better)
Translates to: GLEARKVSPRCSGTERGDCYPTT*GRAHTV
Trigger: CACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACA...GTCACCCCTTTCTGTCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CCA 90 bp CATGAGATGCAGGAGCACCAGAGTTCACGGAAATCAAGCCGGCTTTGGACTGGAGGGTGCATGAGCCCGTaGGTCTGGCCTCTGGCACAG +
Preference number: 2 (lower is better)
Translates to: HEMQEHQSSRKSSRLWTGGCMSP*VWPLAQ
Trigger: CTGTGCCAGAGGCCAGACCCACGGGCTCATGCACCC...TCCAGTCCAAAGCCGGCTTGATTTCCGTGAACTCTGGTGCTCCTGCATCTCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR TCA 90 bp AGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACTGGCTCAGGGGTGCATaGGCCCGTGGGTCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: RFTLPSCKAHILFKDQTHWLRGA*ARGSGL
Trigger: GAGGCCAGACCCACGGGCTCATGCACCCCTGAGCCA...GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp AAGAATTTGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTCACACTGCTGGCTCAGGGGTaGATGAGCCCGTGGGTCTGG +
Preference number: 2 (lower is better)
Translates to: KNLKRFGTWALSKAGRFTLLAQG*MSPWVW
Trigger: CCAGACCCACGGGCTCATGCACCCCTGAGCCAGCAG...TGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CCA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTGGAGCGGGCAGAATTaGGACAGGCCTCCTCCAGTC +
Preference number: 2 (lower is better)
Translates to: LARPTSCSRTKPTGFSTAWSGQN*DRPPPV
Trigger: GACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCA...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CAA 90 bp TGGCCTCTGGCACAGTCTACATGCTTCCACAACAACGACAGCAGTTaGATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTG +
Preference number: 2 (lower is better)
Translates to: WPLAQSTCFHNNDSS*ITDVTPRRGGGLTL
Trigger: CAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTATCAAACTGCTGTCGTTGTTGTGGAAGCATGTAGACTGTGCCAGAGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp ATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCCCCCACTATAAGACCACATaGTTTATACAGCGGCAATGC +
Preference number: 2 (lower is better)
Translates to: ITDVTPRRGGGLTLCASPHYKTT*FIQRQC
Trigger: GCATTGCCGCTGTATAAAGCATGTGGTCTTATAGTG...GGGGGAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTAT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CCA 90 bp AGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACTGTTACCCCACGACGTaGGGGCGGGCTCACACTGTG +
Preference number: 2 (lower is better)
Translates to: RFTLPSCKAHILFKDQTHCYPTT*GRAHTV
Trigger: CACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACA...GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp TTCCCCTCCTCTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTCTGCAGGCAGGCGACTaGTCACTTCCTCCTGATCGT +
Preference number: 2 (lower is better)
Translates to: FPSSAPGIEPRVPFPRCPLQAGD*SLPPDR
Trigger: ACGATCAGGAGGAAGTGAGCAGTCGCCTGCCTGCAG...AGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAGAGGAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCGGTGCTCAGGACACCTaGATTTGTGGGACGTACGCA +
Preference number: 2 (lower is better)
Translates to: LARPTSCSRTKPTGFSTAGAQDT*ICGTYA
Trigger: TGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACC...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CCA 90 bp AAGAATTTGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTCACATGGAGCGGGCAGAATTaGGACAGGCCTCCTCCAGTC +
Preference number: 2 (lower is better)
Translates to: KNLKRFGTWALSKAGRFTWSGQN*DRPPPV
Trigger: GACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCA...TGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CCA 90 bp CATGAGATGCAGGAGCACCAGAGTTCACGGAAATCAAGCCGGCTTTGGACTGGAGGACACCTGCATTTGTaGGACGTACGCATGAGGCAG +
Preference number: 2 (lower is better)
Translates to: HEMQEHQSSRKSSRLWTGGHLHL*DVRMRQ
Trigger: CTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCC...TCCAGTCCAAAGCCGGCTTGATTTCCGTGAACTCTGGTGCTCCTGCATCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CCA 90 bp TTCCCCTCCTCTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTCGTGGGTCTGGCCTCTaGCACAGTCTACATGCTTCC +
Preference number: 2 (lower is better)
Translates to: FPSSAPGIEPRVPFPRCPRGSGL*HSLHAS
Trigger: GGAAGCATGTAGACTGTGCCAGAGGCCAGACCCACG...AGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAGAGGAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CCA 90 bp AAGAATTTGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTCACAAGGGGAGGGGACCCATaGGGCACACTCATGAGATGC +
Preference number: 2 (lower is better)
Translates to: KNLKRFGTWALSKAGRFTRGGDP*GTLMRC
Trigger: GCATCTCATGAGTGTGCCCCATGGGTCCCCTCCCCT...TGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp CCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTAATTTACTTGGCGGGCTCACACTGTaGGCCTCCCCCACACTCTTC +
Preference number: 2 (lower is better)
Translates to: PHLVQGPNPQALALPNLLGGLTL*ASPTLF
Trigger: GAAGAGTGTGGGGGAGGCGCACAGTGTGAGCCCGCC...AAGTAAATTAGGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CCA 90 bp AGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACATGAGCCCGTGGGTCTaGCCTCTGGCACAGTCTACA +
Preference number: 2 (lower is better)
Translates to: SPSRFTLPSCKAHILFKDMSPWV*PLAQST
Trigger: TGTAGACTGTGCCAGAGGCCAGACCCACGGGCTCAT...GTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp AGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACTCCCACTGGGTGTGGTaGTCAGGACACCTGCATTTG +
Preference number: 2 (lower is better)
Translates to: SPSRFTLPSCKAHILFKDSHWVW*SGHLHL
Trigger: CAAATGCAGGTGTCCTGAGCACCACACCCAGTGGGA...GTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp AGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACGGCACACTCATGAGATaGAGGAGCACCAGAGTTCAC +
Preference number: 2 (lower is better)
Translates to: RFTLPSCKAHILFKDQTHGTLMR*RSTRVH
Trigger: GTGAACTCTGGTGCTCCTGCATCTCATGAGTGTGCC...GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp AGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACGGCACACTCATGAGATaGAGGAGCACCAGAGTTCAC +
Preference number: 2 (lower is better)
Translates to: SPSRFTLPSCKAHILFKDGTLMR*RSTRVH
Trigger: GTGAACTCTGGTGCTCCTGCATCTCATGAGTGTGCC...GTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CCA 90 bp CCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTAATTTACTTAGGGGAGGGGACCCATaGGGCACACTCATGAGATGC +
Preference number: 2 (lower is better)
Translates to: PHLVQGPNPQALALPNLLRGGDP*GTLMRC
Trigger: GCATCTCATGAGTGTGCCCCATGGGTCCCCTCCCCT...AAGTAAATTAGGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp GTGGTGCTCAGGACACCTGCATTTGTGGGACGTACGCATGAGGCAGGAGTAGAACACTATAAGACCACATaGTTTATACAGCGGCAATGC +
Preference number: 2 (lower is better)
Translates to: VVLRTPAFVGRTHEAGVEHYKTT*FIQRQC
Trigger: GCATTGCCGCTGTATAAAGCATGTGGTCTTATAGTG...TTCTACTCCTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp AGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCTGGCACAGTCTACATaGTTCCACAACAACGACAGC +
Preference number: 2 (lower is better)
Translates to: SPSRFTLPSCKAHILFKDLAQST*FHNNDS
Trigger: GCTGTCGTTGTTGTGGAAGCATGTAGACTGTGCCAG...GTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CCA 90 bp AAGAATTTGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTCACAAAATCAAGCCGGCTTTaGACTGGAGGCTCGGAAAGT +
Preference number: 2 (lower is better)
Translates to: KNLKRFGTWALSKAGRFTKSSRL*TGGSES
Trigger: ACTTTCCGAGCCTCCAGTCCAAAGCCGGCTTGATTT...TGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp CCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTAATTTACTTCTGGCACAGTCTACATaGTTCCACAACAACGACAGC +
Preference number: 2 (lower is better)
Translates to: PHLVQGPNPQALALPNLLLAQST*FHNNDS
Trigger: GCTGTCGTTGTTGTGGAAGCATGTAGACTGTGCCAG...AAGTAAATTAGGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR TCA 90 bp ATTGTGGATAATACTGGATTCTTCCCAAAAGGACTACCACAAAACAAAGCTTTCTGTGGGACGTACGCATaGGGCAGGAGTAGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: IVDNTGFFPKGLPQNKAFCGTYA*GRSRSC
Trigger: GCAGCTTCTACTCCTGCCTCATGCGTACGTCCCACA...GAAAGCTTTGTTTTGTGGTAGTCCTTTTGGGAAGAATCCAGTATTATCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR TCA 90 bp AAGAATTTGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTCACACCTTACCTTCTCTGCTaGATTAAACCAGGAATAACA +
Preference number: 2 (lower is better)
Translates to: KNLKRFGTWALSKAGRFTPYLLC*IKPGIT
Trigger: TGTTATTCCTGGTTTAATTCAGCAGAGAAGGTAAGG...TGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp AGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACCCTACAGTTAAAATTTaGAGTGTTTCTAAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: RFTLPSCKAHILFKDQTHPTVKI*SVSKGK
Trigger: CTTCCCCTTAGAAACACTGCAAATTTTAACTGTAGG...GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CAA 90 bp TATGACTTCATGGTTCAAATCCTTAAAGTTAAACATGTGAAGAATTaGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTC +
Preference number: 2 (lower is better)
Translates to: YDFMVQILKVKHVKN*KRFGTWALSKAGRF
Trigger: GAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTTCACATGTTTAACTTTAAGGATTTGAACCATGAAGTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp ATTGTGGATAATACTGGATTCTTCCCAAAAGGACTACCACAAAACAAAGCTTTCTTTATACAGCGGCAATaGAGTCAAGCCCGCTTTTCC +
Preference number: 2 (lower is better)
Translates to: IVDNTGFFPKGLPQNKAFFIQRQ*SQARFS
Trigger: GGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAAA...GAAAGCTTTGTTTTGTGGTAGTCCTTTTGGGAAGAATCCAGTATTATCCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR GCA 90 bp ATTGTGGATAATACTGGATTCTTCCCAAAAGGACTACCACAAAACAAAGCTTTCTTTACTCTCCCATCTTaGAAGGCCCACATCTTGTTC +
Preference number: 2 (lower is better)
Translates to: IVDNTGFFPKGLPQNKAFFTLPS*KAHILF
Trigger: GAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAA...GAAAGCTTTGTTTTGTGGTAGTCCTTTTGGGAAGAATCCAGTATTATCCACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CCA 72 bp GCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTaGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGC +
Preference number: 3 (lower is better)
Translates to: AVKPAFPWSGQN*DRPPPVSRAQG
Trigger: GCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CCA 72 bp GCCCTGCTGGCTCAGGGGTGCATGAGCCCGTGGGTCTaGCCTCTGGCACAGTCTACATGCTTCCACAACAAC +
Preference number: 3 (lower is better)
Translates to: ALLAQGCMSPWV*PLAQSTCFHNN
Trigger: GTTGTTGTGGAAGCATGTAGACTGTGCCAGAGGCCAGACCCACGGGCTCATGCACCCCTGAGCCAGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR GCA 72 bp TGTGCGCCTCCCCCACACTCTTCCCACTGGGTGTGGTaGTCAGGACACCTGCATTTGTGGGACGTACGCATG +
Preference number: 3 (lower is better)
Translates to: CAPPPHSSHWVW*SGHLHLWDVRM
Trigger: CATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCACACCCAGTGGGAAGAGTGTGGGGGAGGCGCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR GCA 72 bp GAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGGGGTaGATGAGCCCGTGGGTCTGGCCTCTGGCACAGTCT +
Preference number: 3 (lower is better)
Translates to: EFLFQDALLAQG*MSPWVWPLAQS
Trigger: AGACTGTGCCAGAGGCCAGACCCACGGGCTCATGCACCCCTGAGCCAGCAGGGCATCTTGGAAAAGGAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR GCA 72 bp GCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATaGCCTGCTGGCTCAGGGGTGCATGAGCCCGTGGGT +
Preference number: 3 (lower is better)
Translates to: APGIEPRVPFPR*PAGSGVHEPVG
Trigger: ACCCACGGGCTCATGCACCCCTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CCA 72 bp ACGGGACAAGGAAATGCTGAGAGGGGAGGGGACCCATaGGGCACACTCATGAGATGCAGGAGCACCAGAGTT +
Preference number: 3 (lower is better)
Translates to: TGQGNAERGGDP*GTLMRCRSTRV
Trigger: AACTCTGGTGCTCCTGCATCTCATGAGTGTGCCCCATGGGTCCCCTCCCCTCTCAGCATTTCCTTGTCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CCA 72 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATaGAGCGGGCAGAATTGGGACAGGCCTCCTCCAGTC +
Preference number: 3 (lower is better)
Translates to: LYSGNAVKPAFP*SGQNWDRPPPV
Trigger: GACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CCA 72 bp GCACCAGAGTTCACGGAAATCAAGCCGGCTTTGGACTaGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGA +
Preference number: 3 (lower is better)
Translates to: APEFTEIKPALD*RLGKSVPDVVG
Trigger: TCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCCAAAGCCGGCTTGATTTCCGTGAACTCTGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CAA 90 bp AAGAATTTGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTCACATCAGGACACCTGCATTaGTGGGACGTACGCATGAGG +
Preference number: 3 (lower is better)
Translates to: KNLKRFGTWALSKAGRFTSGHLH*WDVRMR
Trigger: CCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGA...TGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR GCA 72 bp ATGAGCCCGTGGGTCTGGCCTCTGGCACAGTCTACATaGTTCCACAACAACGACAGCAGTTTGATAACAGAT +
Preference number: 3 (lower is better)
Translates to: MSPWVWPLAQST*FHNNDSSLITD
Trigger: ATCTGTTATCAAACTGCTGTCGTTGTTGTGGAAGCATGTAGACTGTGCCAGAGGCCAGACCCACGGGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CAA 90 bp CATGAGATGCAGGAGCACCAGAGTTCACGGAAATCAAGCCGGCTTTGGACTGGAAACAACGACAGCAGTTaGATAACAGATGTTACCCCA +
Preference number: 3 (lower is better)
Translates to: HEMQEHQSSRKSSRLWTGNNDSS*ITDVTP
Trigger: TGGGGTAACATCTGTTATCAAACTGCTGTCGTTGTT...TCCAGTCCAAAGCCGGCTTGATTTCCGTGAACTCTGGTGCTCCTGCATCTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR GCA 72 bp AAACACTATAAGACCACATGCTTTATACAGCGGCAATaGAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAA +
Preference number: 3 (lower is better)
Translates to: KHYKTTCFIQRQ*SQARFSMERAE
Trigger: TTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAAAGCATGTGGTCTTATAGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR-3UTR CAA 90 bp AAGAATTTGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTCACAAACAACGACAGCAGTTaGATAACAGATGTTACCCCA +
Preference number: 3 (lower is better)
Translates to: KNLKRFGTWALSKAGRFTNNDSS*ITDVTP
Trigger: TGGGGTAACATCTGTTATCAAACTGCTGTCGTTGTT...TGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR TCA 72 bp TCCAAGGCAGGTAGGTTCACACCTTACCTTCTCTGCTaGATTAAACCAGGAATAACACAGCTAGGAAAACGC +
Preference number: 3 (lower is better)
Translates to: SKAGRFTPYLLC*IKPGITQLGKR
Trigger: GCGTTTTCCTAGCTGTGTTATTCCTGGTTTAATTCAGCAGAGAAGGTAAGGTGTGAACCTACCTGCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp TTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGCTGAGGCTGCTGGCTCAGGGGTaGATGAGCCCGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LGQASSSQSGTGRRRQLRLLAQG*MSPWVW
Trigger: CCAGACCCACGGGCTCATGCACCCCTGAGCCAGCAG...CCTCAGCTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp GGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCACCTCCAGGCGAGGACTaGGGTCCAGTGGCACACGCT +
Preference number: 4 (lower is better)
Translates to: GRIGTGLLQSVGHRAQEAPPGED*GPVAHA
Trigger: AGCGTGTGCCACTGGACCTCAGTCCTCGCCTGGAGG...TGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp ATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCCCCGGAAGAGCAGCGGCATaGCGGCAGCGGCGACCTCTG +
Preference number: 4 (lower is better)
Translates to: ITDVTPRRGGGLTLCASPGRAAA*RQRRPL
Trigger: CAGAGGTCGCCGCTGCCGCCATGCCGCTGCTCTTCC...GGGGGAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR CCA 90 bp GGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGGGTGCATGAGCCCGTaGGTCTGGCCTCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: GRIGTGLLQSVGHRAQEAGCMSP*VWPLAQ
Trigger: CTGTGCCAGAGGCCAGACCCACGGGCTCATGCACCC...TGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp ATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCCCCGGCGGGCTCACACTGTaGGCCTCCCCCACACTCTTC +
Preference number: 4 (lower is better)
Translates to: ITDVTPRRGGGLTLCASPGGLTL*ASPTLF
Trigger: GAAGAGTGTGGGGGAGGCGCACAGTGTGAGCCCGCC...GGGGGAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp TTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGCTGAGGAGGACTGAGGTCCAGTaGCACACGCTCGGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LGQASSSQSGTGRRRQLRRTEVQ*HTLGLS
Trigger: GCTCAGACCGAGCGTGTGCCACTGGACCTCAGTCCT...CCTCAGCTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp GGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCATGTTACCCCACGACGTaGGGGCGGGCTCACACTGTG +
Preference number: 4 (lower is better)
Translates to: GRIGTGLLQSVGHRAQEACYPTT*GRAHTV
Trigger: CACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACA...TGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp GGACTGGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGACAGAAAGGGGTGACAGCGAGGCCGTTAGCTaGTCCGGCTCGCCGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GLEARKVSPRCSGTERGDSEAVS*SGSPGP
Trigger: CGGCCCCGGCGAGCCGGACCAGCTAACGGCCTCGCT...GTCACCCCTTTCTGTCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR CCA 90 bp TTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGCTGAGGCGTGGGTCTGGCCTCTaGCACAGTCTACATGCTTCC +
Preference number: 4 (lower is better)
Translates to: LGQASSSQSGTGRRRQLRRGSGL*HSLHAS
Trigger: GGAAGCATGTAGACTGTGCCAGAGGCCAGACCCACG...CCTCAGCTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp GCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGTGTGGGACGTACGCATaGGGCAGGAGTAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: AELGQASSSQSGTGRRRQCGTYA*GRSRSC
Trigger: GCAGCTTCTACTCCTGCCTCATGCGTACGTCCCACA...CTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp GGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCACATGGGGCACACTCATaGGATGCAGGAGCACCAGAG +
Preference number: 4 (lower is better)
Translates to: GRIGTGLLQSVGHRAQEAHGAHS*DAGAPE
Trigger: CTCTGGTGCTCCTGCATCTCATGAGTGTGCCCCATG...TGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCACTGCAGGCAGGCGACTaGTCACTTCCTCCTGATCGT +
Preference number: 4 (lower is better)
Translates to: GRIGTGLLQSVGHRAQEALQAGD*SLPPDR
Trigger: ACGATCAGGAGGAAGTGAGCAGTCGCCTGCCTGCAG...TGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp GCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGGGCTGCTCATCGGCGTaGTGGGCGAGAAGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: AELGQASSSQSGTGRRRQGCSSA*WARRKD
Trigger: ATCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCC...CTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR CCA 90 bp ATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCCCCAGGGGAGGGGACCCATaGGGCACACTCATGAGATGC +
Preference number: 4 (lower is better)
Translates to: ITDVTPRRGGGLTLCASPRGGDP*GTLMRC
Trigger: GCATCTCATGAGTGTGCCCCATGGGTCCCCTCCCCT...GGGGGAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp CTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGGCAGGGCCAGGCCGCTaGGGCCCGTGTAGGTGCGGA +
Preference number: 4 (lower is better)
Translates to: LLQVSNQEFLFQDALLAQAGPGR*GPCRCG
Trigger: TCCGCACCTACACGGGCCTCAGCGGCCTGGCCCTGC...CTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR TCA 90 bp GGACTGGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGACAGAAAGGGGTGACTGGCTCAGGGGTGCATaGGCCCGTGGGTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLEARKVSPRCSGTERGDWLRGA*ARGSGL
Trigger: GAGGCCAGACCCACGGGCTCATGCACCCCTGAGCCA...GTCACCCCTTTCTGTCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCACCTCTTCCTGGTCACTaGTTGGCCTTTCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: GRIGTGLLQSVGHRAQEAPLPGH*LAFPQD
Trigger: GTCCTGTGGAAAGGCCAAGCAGTGACCAGGAAGAGG...TGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGTACGCTGCACCAGCATaGGCTGTCTCTCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: AELGQASSSQSGTGRRRQYAAPA*AVSHQQ
Trigger: CTGCTGATGAGAGACAGCGCATGCTGGTGCAGCGTA...CTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp TTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGCTGAGGGACTTTCCCCTCCTCTaGTCCAGGTATCGAACCAAG +
Preference number: 4 (lower is better)
Translates to: LGQASSSQSGTGRRRQLRDFPLL*SRYRTK
Trigger: CTTGGTTCGATACCTGGAGCAGAGGAGGGGAAAGTC...CCTCAGCTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp TTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGCTGAGGGGCACACTCATGAGATaGAGGAGCACCAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LGQASSSQSGTGRRRQLRGTLMR*RSTRVH
Trigger: GTGAACTCTGGTGCTCCTGCATCTCATGAGTGTGCC...CCTCAGCTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp TTTGATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCTGTAGGTGCGGAGGCTaGGCCAGGGGAAGCGCTCGA +
Preference number: 4 (lower is better)
Translates to: FDNRCYPTTWGRAHTVRLCRCGG*ARGSAR
Trigger: TCGAGCGCTTCCCCTGGCCCAGCCTCCGCACCTACA...GAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTATCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR CCA 90 bp GCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGTCTCATCAGCAGACTTaGAGAAGCGGCTCCCACGAG +
Preference number: 4 (lower is better)
Translates to: AELGQASSSQSGTGRRRQSHQQT*RSGSHE
Trigger: CTCGTGGGAGCCGCTTCTCCAAGTCTGCTGATGAGA...CTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp ATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCCCCATGAGCCCGTGGGTCTaGCCTCTGGCACAGTCTACA +
Preference number: 4 (lower is better)
Translates to: ITDVTPRRGGGLTLCASPMSPWV*PLAQST
Trigger: TGTAGACTGTGCCAGAGGCCAGACCCACGGGCTCAT...GGGGGAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CAA 72 bp TGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATaGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: CSQARFSMERAE*GQASSSQSGTG
Trigger: CCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp GCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGCGATCCTTGCAGAGCTaGACCATCAGGTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: AELGQASSSQSGTGRRRQRSLQS*TIRCRK
Trigger: CTTTCTGCACCTGATGGTTCAGCTCTGCAAGGATCG...CTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR TCA 90 bp GGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCATGTGAATATGGTGCATaGGGTCCAGGGACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: GRIGTGLLQSVGHRAQEACEYGA*GPGTGE
Trigger: CTCTCCTGTCCCTGGACCTCATGCACCATATTCACA...TGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR TCA 90 bp ATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCCCCGATGAGCCATTGCATTaGGCTGGGAGTTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: ITDVTPRRGGGLTLCASPDEPLH*AGSCWP
Trigger: AGGCCAGCAACTCCCAGCTCAATGCAATGGCTCATC...GGGGGAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GTGGTGCTCAGGACACCTGCATTTGTGGGACGTACGCATGAGGCAGGAGTAGAAGGACTCGACCGTGGCTaGTCATCGGCGTGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: VVLRTPAFVGRTHEAGVEGLDRG*SSAWWA
Trigger: CGCCCACCACGCCGATGAGCAGCCACGGTCGAGTCC...TTCTACTCCTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR GCA 90 bp TTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGCTGAGGCTCTGGAGTTGCAACTaGAAACCTGGCCTCCATGTT +
Preference number: 4 (lower is better)
Translates to: LGQASSSQSGTGRRRQLRLWSCN*KPGLHV
Trigger: AACATGGAGGCCAGGTTTGCAGTTGCAACTCCAGAG...CCTCAGCTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp ATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCCCCCGTTTGCGAGCTTGCTaGAGGAGTTCGTCCTTACGC +
Preference number: 4 (lower is better)
Translates to: ITDVTPRRGGGLTLCASPRLRAC*RSSSLR
Trigger: GCGTAAGGACGAACTCCTCCAGCAAGCTCGCAAACG...GGGGGAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTAT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp GCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGGGCCTCCAGGCGAGGACTaGGGTCCAGTGGCACACGCT +
Preference number: 4 (lower is better)
Translates to: APGIEPRVPFPRCPAGSGPPGED*GPVAHA
Trigger: AGCGTGTGCCACTGGACCTCAGTCCTCGCCTGGAGG...CCCTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp TTTCCATGGAGCGGGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGTGTGGGACGTACGCATaGGGCAGGAGTAGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: FPWSGQNWDRPPPVSRAQCGTYA*GRSRSC
Trigger: GCAGCTTCTACTCCTGCCTCATGCGTACGTCCCACA...CTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCATGGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp CTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGTGGCTCAGGGGTGCATaGGCCCGTGGGTCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LLQVSNQEFLFQDALLAQWLRGA*ARGSGL
Trigger: GAGGCCAGACCCACGGGCTCATGCACCCCTGAGCCA...CTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCACTCTGGAGTTGCAACTaGAAACCTGGCCTCCATGTT +
Preference number: 4 (lower is better)
Translates to: GRIGTGLLQSVGHRAQEALWSCN*KPGLHV
Trigger: AACATGGAGGCCAGGTTTGCAGTTGCAACTCCAGAG...TGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGCTGGCACAGTCTACATaGTTCCACAACAACGACAGC +
Preference number: 4 (lower is better)
Translates to: AELGQASSSQSGTGRRRQLAQST*FHNNDS
Trigger: GCTGTCGTTGTTGTGGAAGCATGTAGACTGTGCCAG...CTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp ATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCCCCGACTTTCCCCTCCTCTaGTCCAGGTATCGAACCAAG +
Preference number: 4 (lower is better)
Translates to: ITDVTPRRGGGLTLCASPDFPLL*SRYRTK
Trigger: CTTGGTTCGATACCTGGAGCAGAGGAGGGGAAAGTC...GGGGGAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp AAGAATTTGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTCACAGGCAGCGGCGACCTCTaGCCCCCAGGCTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: KNLKRFGTWALSKAGRFTGSGDL*PPGFPA
Trigger: CGCAGGGAAGCCTGGGGGCCAGAGGTCGCCGCTGCC...TGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR CCA 90 bp GGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCACGAAGACAGGAGTTGTaGAAAAGATGTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: GRIGTGLLQSVGHRAQEARRQEL*KRCPQG
Trigger: GCCCTGTGGACATCTTTTCCACAACTCCTGTCTTCG...TGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR TCA 90 bp TTTGATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCATGGGGCACACTCATaGGATGCAGGAGCACCAGAG +
Preference number: 4 (lower is better)
Translates to: FDNRCYPTTWGRAHTVRLHGAHS*DAGAPE
Trigger: CTCTGGTGCTCCTGCATCTCATGAGTGTGCCCCATG...GAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTATCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp AGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACGCCGGCGGCTCAGGCTaGAGCGAGGCCGTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: RFTLPSCKAHILFKDQTHAGGSG*SEAVSW
Trigger: CCAGCTAACGGCCTCGCTGCAGCCTGAGCCGCCGGC...GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR GCA 90 bp CATGAGATGCAGGAGCACCAGAGTTCACGGAAATCAAGCCGGCTTTGGACTGGACTGCTGGCTCAGGGGTaGATGAGCCCGTGGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HEMQEHQSSRKSSRLWTGLLAQG*MSPWVW
Trigger: CCAGACCCACGGGCTCATGCACCCCTGAGCCAGCAG...TCCAGTCCAAAGCCGGCTTGATTTCCGTGAACTCTGGTGCTCCTGCATCTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp TTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGCTGAGGTTTACTCTCCCATCTTaGAAGGCCCACATCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LGQASSSQSGTGRRRQLRFTLPS*KAHILF
Trigger: GAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAA...CCTCAGCTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp GGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCATGCCAAGAATGTTGGTaGTGTGCATCACTTCAACCG +
Preference number: 4 (lower is better)
Translates to: GRIGTGLLQSVGHRAQEACQECW*CASLQP
Trigger: CGGTTGAAGTGATGCACACCACCAACATTCTTGGCA...TGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp TTTCCATGGAGCGGGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGCCATTGCATTGAGCTaGGAGTTGCTGGCCTGCGTA +
Preference number: 4 (lower is better)
Translates to: FPWSGQNWDRPPPVSRAQAIALS*ELLACV
Trigger: TACGCAGGCCAGCAACTCCCAGCTCAATGCAATGGC...CTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCATGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCGGGTGCATGAGCCCGTaGGTCTGGCCTCTGGCACAG +
Preference number: 4 (lower is better)
Translates to: LARPTSCSRTKPTGFSTAGCMSP*VWPLAQ
Trigger: CTGTGCCAGAGGCCAGACCCACGGGCTCATGCACCC...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp GCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGGAATTTGAAGAGATTTaGGACCTGGGCCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: AELGQASSSQSGTGRRRQEFEEI*DLGPLQ
Trigger: TTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTC...CTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp GGACTGGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGACAGAAAGGGGTGACGGCACACGCTCGGTCTaGGCAGAAGTTTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GLEARKVSPRCSGTERGDGTRSV*AEVSPS
Trigger: AGAGGGAGAAACTTCTGCTCAGACCGAGCGTGTGCC...GTCACCCCTTTCTGTCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp TTCCCCTCCTCTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGAGGTCTGCTGCTTCTaGAGCCTCCGTTCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: FPSSAPGIEPRVPFPRCPEVCCF*SLRSAA
Trigger: CGCCGCGGAACGGAGGCTTCAGAAGCAGCAGACCTC...AGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAGAGGAGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GGACTGGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGACAGAAAGGGGTGACCTGCAGGCAGGCGACTaGTCACTTCCTCCTGATCGT +
Preference number: 4 (lower is better)
Translates to: GLEARKVSPRCSGTERGDLQAGD*SLPPDR
Trigger: ACGATCAGGAGGAAGTGAGCAGTCGCCTGCCTGCAG...GTCACCCCTTTCTGTCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCGGCAGGAGTAGAAGCTaGCTGCTGCAGGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: LARPTSCSRTKPTGFSTAGRSRS*LLQAGD
Trigger: GTCGCCTGCCTGCAGCAGGCAGCTTCTACTCCTGCC...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGTTTACTCTCCCATCTTaGAAGGCCCACATCTTGTTC +
Preference number: 4 (lower is better)
Translates to: AELGQASSSQSGTGRRRQFTLPS*KAHILF
Trigger: GAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAA...CTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGGACAGGACTCGACCGTaGCTGCTCATCGGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LYSGNAVKPAFPWSGQNWDRTRP*LLIGVV
Trigger: CACCACGCCGATGAGCAGCCACGGTCGAGTCCTGTC...CCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR CCA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTGTTACCCCACGACGTaGGGGCGGGCTCACACTGTG +
Preference number: 4 (lower is better)
Translates to: LARPTSCSRTKPTGFSTACYPTT*GRAHTV
Trigger: CACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACA...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GGACTGGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGACAGAAAGGGGTGACCAGCTCCTCTGGAGTTaGAACTGCAAACCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GLEARKVSPRCSGTERGDQLLWS*NCKPGL
Trigger: GAGGCCAGGTTTGCAGTTGCAACTCCAGAGGAGCTG...GTCACCCCTTTCTGTCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGGGAGTAGAAGCTGCCTaGTGCAGGCAGGCGACTGCT +
Preference number: 4 (lower is better)
Translates to: LYSGNAVKPAFPWSGQNWGVEAA*CRQATA
Trigger: AGCAGTCGCCTGCCTGCAGCAGGCAGCTTCTACTCC...CCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GGACTGGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGACAGAAAGGGGTGACGGTGCTCAGGACACCTaGATTTGTGGGACGTACGCA +
Preference number: 4 (lower is better)
Translates to: GLEARKVSPRCSGTERGDGAQDT*ICGTYA
Trigger: TGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACC...GTCACCCCTTTCTGTCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp TTTGATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCGGCACACTCATGAGATaGAGGAGCACCAGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: FDNRCYPTTWGRAHTVRLGTLMR*RSTRVH
Trigger: GTGAACTCTGGTGCTCCTGCATCTCATGAGTGTGCC...GAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTATCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp ATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCCCCCCAAACACAATACACTaGATGAGCTTAGCCACCAAC +
Preference number: 4 (lower is better)
Translates to: ITDVTPRRGGGLTLCASPPNTIH*MSLATN
Trigger: GTTGGTGGCTAAGCTCATCCAGTGTATTGTGTTTGG...GGGGGAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTAT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR CCA 90 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGAGGACTGAGGTCCAGTaGCACACGCTCGGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: LYSGNAVKPAFPWSGQNWRTEVQ*HTLGLS
Trigger: GCTCAGACCGAGCGTGTGCCACTGGACCTCAGTCCT...CCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGAGGGGAGGGGACCCATaGGGCACACTCATGAGATGC +
Preference number: 4 (lower is better)
Translates to: LYSGNAVKPAFPWSGQNWRGGDP*GTLMRC
Trigger: GCATCTCATGAGTGTGCCCCATGGGTCCCCTCCCCT...CCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp ATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCCCCTTGAGGTCCCAGAGGTaGATTACGTATCGTAAAATC +
Preference number: 4 (lower is better)
Translates to: ITDVTPRRGGGLTLCASPLRSQR*ITYRKI
Trigger: GATTTTACGATACGTAATTCACCTCTGGGACCTCAA...GGGGGAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR TCA 90 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGGGCACACGCTCGGTCTaGGCAGAAGTTTCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: LYSGNAVKPAFPWSGQNWGTRSV*AEVSPS
Trigger: AGAGGGAGAAACTTCTGCTCAGACCGAGCGTGTGCC...CCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GTGGTGCTCAGGACACCTGCATTTGTGGGACGTACGCATGAGGCAGGAGTAGAAAGTTTCCGCGCAGCCTaGATGGAGTCCCAACAGATG +
Preference number: 4 (lower is better)
Translates to: VVLRTPAFVGRTHEAGVESFRAA*MESQQM
Trigger: CATCTGTTGGGACTCCATGCAGGCTGCGCGGAAACT...TTCTACTCCTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGAGAATGTTGGTGGTGTaGATCACTTCAACCGAAAAA +
Preference number: 4 (lower is better)
Translates to: AELGQASSSQSGTGRRRQRMLVV*ITSTEK
Trigger: TTTTTCGGTTGAAGTGATGCACACCACCAACATTCT...CTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GTGGTGCTCAGGACACCTGCATTTGTGGGACGTACGCATGAGGCAGGAGTAGAACCTCTTCCTGGTCACTaGTTGGCCTTTCCACAGGAC +
Preference number: 4 (lower is better)
Translates to: VVLRTPAFVGRTHEAGVEPLPGH*LAFPQD
Trigger: GTCCTGTGGAAAGGCCAAGCAGTGACCAGGAAGAGG...TTCTACTCCTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GTGGTGCTCAGGACACCTGCATTTGTGGGACGTACGCATGAGGCAGGAGTAGAATACGCTGCACCAGCATaGGCTGTCTCTCATCAGCAG +
Preference number: 4 (lower is better)
Translates to: VVLRTPAFVGRTHEAGVEYAAPA*AVSHQQ
Trigger: CTGCTGATGAGAGACAGCGCATGCTGGTGCAGCGTA...TTCTACTCCTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGGGAGTTCGTCCTTACGCTaGACCAGCATGCGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: APGIEPRVPFPRCPAGSGSSSLR*TSMRCL
Trigger: GAGACAGCGCATGCTGGTGCAGCGTAAGGACGAACT...CCCTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp TTTCCATGGAGCGGGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGTTTATACAGCGGCAATaGAGTCAAGCCCGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: FPWSGQNWDRPPPVSRAQFIQRQ*SQARFS
Trigger: GGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAAA...CTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCATGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGGGTCCCACTGGGTGTGGTaGTCAGGACACCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: APGIEPRVPFPRCPAGSGSHWVW*SGHLHL
Trigger: CAAATGCAGGTGTCCTGAGCACCACACCCAGTGGGA...CCCTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp GGACTGGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGACAGAAAGGGGTGACGTTTCTCCCTCTTCCTaGTCACTGCTTGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GLEARKVSPRCSGTERGDVSPSS*SLLGLS
Trigger: GGAAAGGCCAAGCAGTGACCAGGAAGAGGGAGAAAC...GTCACCCCTTTCTGTCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGAGTCTTCCACCTCACTaGGCTCCACTTCCACCTCGC +
Preference number: 4 (lower is better)
Translates to: LLQVSNQEFLFQDALLAQSLPPH*APLPPR
Trigger: GCGAGGTGGAAGTGGAGCCCAGTGAGGTGGAAGACT...CTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CAA 72 bp GCAGGAGCACCAGAGTTCACGGAAATCAAGCCGGCTTaGGACTGGAGGCTCGGAAAGTCAGTCCCAGATGTA +
Preference number: 4 (lower is better)
Translates to: AGAPEFTEIKPA*DWRLGKSVPDV
Trigger: TACATCTGGGACTGACTTTCCGAGCCTCCAGTCCAAAGCCGGCTTGATTTCCGTGAACTCTGGTGCTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp AGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCACGAAGAGGCTGTCTaGGAGCAGGTACTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: SPSRFTLPSCKAHILFKDHEEAV*EQVLGH
Trigger: GTGGCCCAGTACCTGCTCTCAGACAGCCTCTTCGTG...GTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR TCA 90 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGCACAGTCGTCATTGTTaGCAGCCAGCTCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LYSGNAVKPAFPWSGQNWHSRHC*QPAPLE
Trigger: CTCCAGAGGAGCTGGCTGTCAACAATGACGACTGTG...CCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp CATGAGATGCAGGAGCACCAGAGTTCACGGAAATCAAGCCGGCTTTGGACTGGACACAGTCGTCATTGTTaGCAGCCAGCTCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: HEMQEHQSSRKSSRLWTGHSRHC*QPAPLE
Trigger: CTCCAGAGGAGCTGGCTGTCAACAATGACGACTGTG...TCCAGTCCAAAGCCGGCTTGATTTCCGTGAACTCTGGTGCTCCTGCATCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp CATGAGATGCAGGAGCACCAGAGTTCACGGAAATCAAGCCGGCTTTGGACTGGAGATGAGCCATTGCATTaGGCTGGGAGTTGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HEMQEHQSSRKSSRLWTGDEPLH*AGSCWP
Trigger: AGGCCAGCAACTCCCAGCTCAATGCAATGGCTCATC...TCCAGTCCAAAGCCGGCTTGATTTCCGTGAACTCTGGTGCTCCTGCATCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp GGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGTAGGAAAAGGTACTTaGATCCGTCCTTCTAAAATA +
Preference number: 4 (lower is better)
Translates to: GRIGTGLLQSVGHRAQEAVGKGT*IRPSKI
Trigger: TATTTTAGAAGGACGGATTCAAGTACCTTTTCCTAC...TGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp ATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCCCCCCTTACCTTCTCTGCTaGATTAAACCAGGAATAACA +
Preference number: 4 (lower is better)
Translates to: ITDVTPRRGGGLTLCASPPYLLC*IKPGIT
Trigger: TGTTATTCCTGGTTTAATTCAGCAGAGAAGGTAAGG...GGGGGAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTAT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp TTTGATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCAAACGTTTGCGAGCTTaGTGGAGGAGTTCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: FDNRCYPTTWGRAHTVRLKRLRA*WRSSSL
Trigger: TAAGGACGAACTCCTCCAGCAAGCTCGCAAACGTTT...GAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTATCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp CCCCACCCCAAGCAGTCCAGTCAACACCAGAAGAGATCATACCTACAGTTAAAAGGCAGGAGTAGAAGCTaGCTGCTGCAGGCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: PHPKQSSQHQKRSYLQLKGRSRS*LLQAGD
Trigger: GTCGCCTGCCTGCAGCAGGCAGCTTCTACTCCTGCC...TTTTAACTGTAGGTATGATCTCTTCTGGTGTTGACTGGACTGCTTGGGGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp GCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGGGGACAGCCAGCTCCTCTaGAGTTGCAACTGCAAACCT +
Preference number: 4 (lower is better)
Translates to: APGIEPRVPFPRCPAGSGDSQLL*SCNCKP
Trigger: AGGTTTGCAGTTGCAACTCCAGAGGAGCTGGCTGTC...CCCTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp AAGAATTTGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTCACATCCGCGCAGCCTGCATaGAGTCCCAACAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: KNLKRFGTWALSKAGRFTSAQPA*SPNRWH
Trigger: GTGCCATCTGTTGGGACTCCATGCAGGCTGCGCGGA...TGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCGCCATTGCATTGAGCTaGGAGTTGCTGGCCTGCGTA +
Preference number: 4 (lower is better)
Translates to: LARPTSCSRTKPTGFSTAAIALS*ELLACV
Trigger: TACGCAGGCCAGCAACTCCCAGCTCAATGCAATGGC...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGACTGAGCGTGTCAGCTaGAGGTCCTGCAGTACCAGA +
Preference number: 4 (lower is better)
Translates to: LLQVSNQEFLFQDALLAQTERVS*RSCSTR
Trigger: TCTGGTACTGCAGGACCTCCAGCTGACACGCTCAGT...CTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CATGAGATGCAGGAGCACCAGAGTTCACGGAAATCAAGCCGGCTTTGGACTGGAACTGAGCGTGTCAGCTaGAGGTCCTGCAGTACCAGA +
Preference number: 4 (lower is better)
Translates to: HEMQEHQSSRKSSRLWTGTERVS*RSCSTR
Trigger: TCTGGTACTGCAGGACCTCCAGCTGACACGCTCAGT...TCCAGTCCAAAGCCGGCTTGATTTCCGTGAACTCTGGTGCTCCTGCATCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGCGTTTGCGAGCTTGCTaGAGGAGTTCGTCCTTACGC +
Preference number: 4 (lower is better)
Translates to: LYSGNAVKPAFPWSGQNWRLRAC*RSSSLR
Trigger: GCGTAAGGACGAACTCCTCCAGCAAGCTCGCAAACG...CCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGAAGAGATTTGGGACCTaGGCCCTCTCCAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LLQVSNQEFLFQDALLAQKRFGT*ALSKAG
Trigger: ACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTT...CTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
3UTR CAA 72 bp GCACAGTCTACATGCTTCCACAACAACGACAGCAGTTaGATAACAGATGTTACCCCACGACGTGGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: AQSTCFHNNDSS*ITDVTPRRGGG
Trigger: CCCGCCCCCACGTCGTGGGGTAACATCTGTTATCAAACTGCTGTCGTTGTTGTGGAAGCATGTAGACTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp CTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGGAGACTCTGCAGCCATaGAAGCCAAGGTGTGCATTC +
Preference number: 4 (lower is better)
Translates to: LLQVSNQEFLFQDALLAQETLQP*KPRCAF
Trigger: GAATGCACACCTTGGCTTTCATGGCTGCAGAGTCTC...CTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR TCA 90 bp CCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTAATTTACTTGAGGTCTGCTGCTTCTaGAGCCTCCGTTCCGCGGCG +
Preference number: 4 (lower is better)
Translates to: PHLVQGPNPQALALPNLLEVCCF*SLRSAA
Trigger: CGCCGCGGAACGGAGGCTTCAGAAGCAGCAGACCTC...AAGTAAATTAGGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp TTCCCCTCCTCTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTAGTTTCCGCGCAGCCTaGATGGAGTCCCAACAGATG +
Preference number: 4 (lower is better)
Translates to: FPSSAPGIEPRVPFPRCPSFRAA*MESQQM
Trigger: CATCTGTTGGGACTCCATGCAGGCTGCGCGGAAACT...AGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAGAGGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GTGGTGCTCAGGACACCTGCATTTGTGGGACGTACGCATGAGGCAGGAGTAGAAAGGTCTCCCTTCGGCTaGTGCTACAGGAACCAAATT +
Preference number: 4 (lower is better)
Translates to: VVLRTPAFVGRTHEAGVERSPFG*CYRNQI
Trigger: AATTTGGTTCCTGTAGCAGCAGCCGAAGGGAGACCT...TTCTACTCCTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR GCA 90 bp TTCCCCTCCTCTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGGTGCTCAGGACACCTaGATTTGTGGGACGTACGCA +
Preference number: 4 (lower is better)
Translates to: FPSSAPGIEPRVPFPRCPGAQDT*ICGTYA
Trigger: TGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACC...AGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAGAGGAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCGTTTCTCCCTCTTCCTaGTCACTGCTTGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LARPTSCSRTKPTGFSTAVSPSS*SLLGLS
Trigger: GGAAAGGCCAAGCAGTGACCAGGAAGAGGGAGAAAC...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp GCAGTCCAGTCAACACCAGAAGAGATCATACCTACAGTTAAAATTTGCAGTGTTCGTGGGTGTAGCCGGTaGTGGAGCAGACGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: AVQSTPEEIIPTVKICSVRGCSR*WSRRPP
Trigger: TGGCGGCCGTCTGCTCCATCACCGGCTACACCCACG...AACACTGCAAATTTTAACTGTAGGTATGATCTCTTCTGGTGTTGACTGGACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR TCA 90 bp GGACTGGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGACAGAAAGGGGTGACCTTGATGTTCTTCCCTaGCACGATTATTGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: GLEARKVSPRCSGTERGDLDVLP*HDYCRQ
Trigger: TTGCCGACAATAATCGTGTCAGGGAAGAACATCAAG...GTCACCCCTTTCTGTCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR TCA 90 bp CATGAGATGCAGGAGCACCAGAGTTCACGGAAATCAAGCCGGCTTTGGACTGGATGTTCAATGCAGGTCTaGTGCTATCTGACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: HEMQEHQSSRKSSRLWTGCSMQV*CYLTAV
Trigger: CACAGCGGTCAGATAGCATCAGACCTGCATTGAACA...TCCAGTCCAAAGCCGGCTTGATTTCCGTGAACTCTGGTGCTCCTGCATCTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp ATTGTGGATAATACTGGATTCTTCCCAAAAGGACTACCACAAAACAAAGCTTTCCGCTGCTCCCGCTGCTaGCCCTGCCGGCGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: IVDNTGFFPKGLPQNKAFRCSRC*PCRRGR
Trigger: TCTTCCGCGCCGGCAGGGGCAGCAGCGGGAGCAGCG...GAAAGCTTTGTTTTGTGGTAGTCCTTTTGGGAAGAATCCAGTATTATCCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR GCA 90 bp AGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACCAGCTCCTCTGGAGTTaGAACTGCAAACCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RFTLPSCKAHILFKDQTHQLLWS*NCKPGL
Trigger: GAGGCCAGGTTTGCAGTTGCAACTCCAGAGGAGCTG...GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp AGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACAGTTCGTCCTTACGCTaGACCAGCATGCGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: SPSRFTLPSCKAHILFKDSSSLR*TSMRCL
Trigger: GAGACAGCGCATGCTGGTGCAGCGTAAGGACGAACT...GTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GTGGTGCTCAGGACACCTGCATTTGTGGGACGTACGCATGAGGCAGGAGTAGAAAAACGTTTGCGAGCTTaGTGGAGGAGTTCGTCCTTA +
Preference number: 4 (lower is better)
Translates to: VVLRTPAFVGRTHEAGVEKRLRA*WRSSSL
Trigger: TAAGGACGAACTCCTCCAGCAAGCTCGCAAACGTTT...TTCTACTCCTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp AAGAATTTGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTCACATCCCACTGGGTGTGGTaGTCAGGACACCTGCATTTG +
Preference number: 4 (lower is better)
Translates to: KNLKRFGTWALSKAGRFTSHWVW*SGHLHL
Trigger: CAAATGCAGGTGTCCTGAGCACCACACCCAGTGGGA...TGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCCTGGCACAGTCTACATaGTTCCACAACAACGACAGC +
Preference number: 4 (lower is better)
Translates to: LARPTSCSRTKPTGFSTALAQST*FHNNDS
Trigger: GCTGTCGTTGTTGTGGAAGCATGTAGACTGTGCCAG...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp AGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACGTTCCTTTTCCAAGATaGCCTGCTGGCTCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SPSRFTLPSCKAHILFKDVPFPR*PAGSGV
Trigger: CACCCCTGAGCCAGCAGGGCATCTTGGAAAAGGAAC...GTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp GCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGGGACCTCTTCCACTGTCTaGACATTCAGCACACCAAAG +
Preference number: 4 (lower is better)
Translates to: APGIEPRVPFPRCPAGSGTSSTV*TFSTPK
Trigger: CTTTGGTGTGCTGAATGTCCAGACAGTGGAAGAGGT...CCCTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR CCA 90 bp TTCCCCTCCTCTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGACAGCCAGCTCCTCTaGAGTTGCAACTGCAAACCT +
Preference number: 4 (lower is better)
Translates to: FPSSAPGIEPRVPFPRCPDSQLL*SCNCKP
Trigger: AGGTTTGCAGTTGCAACTCCAGAGGAGCTGGCTGTC...AGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAGAGGAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp GTGGTGCTCAGGACACCTGCATTTGTGGGACGTACGCATGAGGCAGGAGTAGAATGCCAAGAATGTTGGTaGTGTGCATCACTTCAACCG +
Preference number: 4 (lower is better)
Translates to: VVLRTPAFVGRTHEAGVECQECW*CASLQP
Trigger: CGGTTGAAGTGATGCACACCACCAACATTCTTGGCA...TTCTACTCCTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CATGAGATGCAGGAGCACCAGAGTTCACGGAAATCAAGCCGGCTTTGGACTGGATTCCTGGTCACTGCTTaGCCTTTCCACAGGACTGTT +
Preference number: 4 (lower is better)
Translates to: HEMQEHQSSRKSSRLWTGFLVTA*PFHRTV
Trigger: AACAGTCCTGTGGAAAGGCCAAGCAGTGACCAGGAA...TCCAGTCCAAAGCCGGCTTGATTTCCGTGAACTCTGGTGCTCCTGCATCTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CCCCACCCCAAGCAGTCCAGTCAACACCAGAAGAGATCATACCTACAGTTAAAAAGTCTTCCACCTCACTaGGCTCCACTTCCACCTCGC +
Preference number: 4 (lower is better)
Translates to: PHPKQSSQHQKRSYLQLKSLPPH*APLPPR
Trigger: GCGAGGTGGAAGTGGAGCCCAGTGAGGTGGAAGACT...TTTTAACTGTAGGTATGATCTCTTCTGGTGTTGACTGGACTGCTTGGGGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CCCCACCCCAAGCAGTCCAGTCAACACCAGAAGAGATCATACCTACAGTTAAAAATGAGCCCGTGGGTCTaGCCTCTGGCACAGTCTACA +
Preference number: 4 (lower is better)
Translates to: PHPKQSSQHQKRSYLQLKMSPWV*PLAQST
Trigger: TGTAGACTGTGCCAGAGGCCAGACCCACGGGCTCAT...TTTTAACTGTAGGTATGATCTCTTCTGGTGTTGACTGGACTGCTTGGGGTGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCAAATCAAGCCGGCTTTaGACTGGAGGCTCGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LARPTSCSRTKPTGFSTAKSSRL*TGGSES
Trigger: ACTTTCCGAGCCTCCAGTCCAAAGCCGGCTTGATTT...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGAAATCAAGCCGGCTTTaGACTGGAGGCTCGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LYSGNAVKPAFPWSGQNWKSSRL*TGGSES
Trigger: ACTTTCCGAGCCTCCAGTCCAAAGCCGGCTTGATTT...CCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp AAGAATTTGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTCACAACGTCCCTTCGTGGTTaGGGTCCCAGAGGTGAATTA +
Preference number: 4 (lower is better)
Translates to: KNLKRFGTWALSKAGRFTTSLRG*GPRGEL
Trigger: TAATTCACCTCTGGGACCTCAACCACGAAGGGACGT...TGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR TCA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTGTTGTTATTTCAACTaGGCGTGTCAGCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: LARPTSCSRTKPTGFSTACCYFN*ACQLEV
Trigger: GACCTCCAGCTGACACGCTCAGTTGAAATAACAACA...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp TTCCCCTCCTCTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTTGTTCAATGCAGGTCTaGTGCTATCTGACCGCTGTG +
Preference number: 4 (lower is better)
Translates to: FPSSAPGIEPRVPFPRCPCSMQV*CYLTAV
Trigger: CACAGCGGTCAGATAGCATCAGACCTGCATTGAACA...AGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAGAGGAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp GGACTGGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGACAGAAAGGGGTGACCACTATAAGACCACATaGTTTATACAGCGGCAATGC +
Preference number: 4 (lower is better)
Translates to: GLEARKVSPRCSGTERGDHYKTT*FIQRQC
Trigger: GCATTGCCGCTGTATAAAGCATGTGGTCTTATAGTG...GTCACCCCTTTCTGTCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp AGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGCAGGAAAGCAGCATaGCAACCAACAGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: RFTLPSCKAHILFKDQTHSRKAA*QPTGTG
Trigger: TCCTGTCCCTGTTGGTTGCCATGCTGCTTTCCTGCT...GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR CCA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTTGCAACTGCAAACCTaGCCTCCATGTTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: LARPTSCSRTKPTGFSTALQLQT*PPCFQP
Trigger: TGGTTGGAAACATGGAGGCCAGGTTTGCAGTTGCAA...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCCAGTACCAGATGGTATaGAACCTGGGGAAACATCTC +
Preference number: 4 (lower is better)
Translates to: LARPTSCSRTKPTGFSTAQYQMV*NLGKHL
Trigger: GAGATGTTTCCCCAGGTTCCATACCATCTGGTACTG...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGCAGTACCAGATGGTATaGAACCTGGGGAAACATCTC +
Preference number: 4 (lower is better)
Translates to: LYSGNAVKPAFPWSGQNWQYQMV*NLGKHL
Trigger: GAGATGTTTCCCCAGGTTCCATACCATCTGGTACTG...CCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp GGACTGGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGACAGAAAGGGGTGACTCCAAAATTTGTCTTTaGGATGCTGTCTCTCACTCA +
Preference number: 4 (lower is better)
Translates to: GLEARKVSPRCSGTERGDSKICL*DAVSHS
Trigger: TGAGTGAGAGACAGCATCTCAAAGACAAATTTTGGA...GTCACCCCTTTCTGTCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR GCA 90 bp AGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACTCTCCCTTCGGCTGCTaGTACAGGAACCAAATTCTC +
Preference number: 4 (lower is better)
Translates to: SPSRFTLPSCKAHILFKDSPFGC*YRNQIL
Trigger: GAGAATTTGGTTCCTGTAGCAGCAGCCGAAGGGAGA...GTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR GCA 90 bp AGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACTGGGAGTTGCTGGCCTaGGTAATGCCAAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: RFTLPSCKAHILFKDQTHWELLA*VMPRML
Trigger: CAACATTCTTGGCATTACGCAGGCCAGCAACTCCCA...GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp CTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGAATCTGATGAGCCATTaGATTGAGCTGGGAGTTGCT +
Preference number: 4 (lower is better)
Translates to: LLQVSNQEFLFQDALLAQNLMSH*IELGVA
Trigger: AGCAACTCCCAGCTCAATGCAATGGCTCATCAGATT...CTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp AGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACTGCTCATCGGCGTGGTaGGCGAGAAGGAAAGATATT +
Preference number: 4 (lower is better)
Translates to: SPSRFTLPSCKAHILFKDCSSAW*ARRKDI
Trigger: AATATCTTTCCTTCTCGCCCACCACGCCGATGAGCA...GTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR CCA 90 bp CCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTAATTTACTTCGTGGGTCTGGCCTCTaGCACAGTCTACATGCTTCC +
Preference number: 4 (lower is better)
Translates to: PHLVQGPNPQALALPNLLRGSGL*HSLHAS
Trigger: GGAAGCATGTAGACTGTGCCAGAGGCCAGACCCACG...AAGTAAATTAGGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGATTCAAATCGATCCTTaGAGAGCTGAACCATCAGGT +
Preference number: 4 (lower is better)
Translates to: LYSGNAVKPAFPWSGQNWIQIDP*RAEPSG
Trigger: ACCTGATGGTTCAGCTCTGCAAGGATCGATTTGAAT...CCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR GCA 90 bp AAGAATTTGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTCACACACAAGAAGAGACTCTaGAGCCATGAAAGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: KNLKRFGTWALSKAGRFTHKKRL*SHESQG
Trigger: ACCTTGGCTTTCATGGCTGCAGAGTCTCTTCTTGTG...TGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR GCA 90 bp GCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGGGAGAATGTTGGTGGTGTaGATCACTTCAACCGAAAAA +
Preference number: 4 (lower is better)
Translates to: APGIEPRVPFPRCPAGSGRMLVV*ITSTEK
Trigger: TTTTTCGGTTGAAGTGATGCACACCACCAACATTCT...CCCTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp AGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACTTTATACAGCGGCAATaGAGTCAAGCCCGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: RFTLPSCKAHILFKDQTHFIQRQ*SQARFS
Trigger: GGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAAA...GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp AGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACGAATTTGAAGAGATTTaGGACCTGGGCCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: RFTLPSCKAHILFKDQTHEFEEI*DLGPLQ
Trigger: TTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTC...GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp TTTATTTCTTTAATAAAGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCATGGAGCGGGCAGAATTaGGACAGGCCTCCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: FISLIKPFKVYSPILQGPWSGQN*DRPPPV
Trigger: GACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCA...TGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCTTTATTAAAGAAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp CTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGGTAGGAAAAGGTACTTaGATCCGTCCTTCTAAAATA +
Preference number: 4 (lower is better)
Translates to: LLQVSNQEFLFQDALLAQVGKGT*IRPSKI
Trigger: TATTTTAGAAGGACGGATTCAAGTACCTTTTCCTAC...CTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp CCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTAATTTACTTAGGTCTGATGCTATCTaGCCGCTGTGTAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: PHLVQGPNPQALALPNLLRSDAI*PLCRKR
Trigger: CCTTTTCCTACACAGCGGTCAGATAGCATCAGACCT...AAGTAAATTAGGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGCCTACAGTTAAAATTTaGAGTGTTTCTAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LYSGNAVKPAFPWSGQNWPTVKI*SVSKGK
Trigger: CTTCCCCTTAGAAACACTGCAAATTTTAACTGTAGG...CCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp ATTGTGGATAATACTGGATTCTTCCCAAAAGGACTACCACAAAACAAAGCTTTCGGAGTAGAAGCTGCCTaGTGCAGGCAGGCGACTGCT +
Preference number: 4 (lower is better)
Translates to: IVDNTGFFPKGLPQNKAFGVEAA*CRQATA
Trigger: AGCAGTCGCCTGCCTGCAGCAGGCAGCTTCTACTCC...GAAAGCTTTGTTTTGTGGTAGTCCTTTTGGGAAGAATCCAGTATTATCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp ATTGTGGATAATACTGGATTCTTCCCAAAAGGACTACCACAAAACAAAGCTTTCTCCGCGCAGCCTGCATaGAGTCCCAACAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: IVDNTGFFPKGLPQNKAFSAQPA*SPNRWH
Trigger: GTGCCATCTGTTGGGACTCCATGCAGGCTGCGCGGA...GAAAGCTTTGTTTTGTGGTAGTCCTTTTGGGAAGAATCCAGTATTATCCACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTAATTTACTTTTCCTGGTCACTGCTTaGCCTTTCCACAGGACTGTT +
Preference number: 4 (lower is better)
Translates to: PHLVQGPNPQALALPNLLFLVTA*PFHRTV
Trigger: AACAGTCCTGTGGAAAGGCCAAGCAGTGACCAGGAA...AAGTAAATTAGGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp GCAGTCCAGTCAACACCAGAAGAGATCATACCTACAGTTAAAATTTGCAGTGTTGGACACCTGCATTTGTaGGACGTACGCATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AVQSTPEEIIPTVKICSVGHLHL*DVRMRQ
Trigger: CTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCC...AACACTGCAAATTTTAACTGTAGGTATGATCTCTTCTGGTGTTGACTGGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp GCAGTCCAGTCAACACCAGAAGAGATCATACCTACAGTTAAAATTTGCAGTGTTAAGCCGGCTTTGGACTaGAGGCTCGGAAAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: AVQSTPEEIIPTVKICSVKPALD*RLGKSV
Trigger: GACTGACTTTCCGAGCCTCCAGTCCAAAGCCGGCTT...AACACTGCAAATTTTAACTGTAGGTATGATCTCTTCTGGTGTTGACTGGACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp AGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACTCGAAATGGAAGAAGTaGTTGTGTTGGTTTAAGCGA +
Preference number: 4 (lower is better)
Translates to: RFTLPSCKAHILFKDQTHSKWKK*LCWFKR
Trigger: TCGCTTAAACCAACACAATCACTTCTTCCATTTCGA...GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR GCA 90 bp TTCCCCTCCTCTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTCCTACAGTTAAAATTTaGAGTGTTTCTAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FPSSAPGIEPRVPFPRCPPTVKI*SVSKGK
Trigger: CTTCCCCTTAGAAACACTGCAAATTTTAACTGTAGG...AGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAGAGGAGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp TTTATTTCTTTAATAAAGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCATCTCATCAGCAGACTTaGAGAAGCGGCTCCCACGAG +
Preference number: 4 (lower is better)
Translates to: FISLIKPFKVYSPILQGPSHQQT*RSGSHE
Trigger: CTCGTGGGAGCCGCTTCTCCAAGTCTGCTGATGAGA...TGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCTTTATTAAAGAAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp TTTATTTCTTTAATAAAGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCAGGACACCTGCATTTGTaGGACGTACGCATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FISLIKPFKVYSPILQGPGHLHL*DVRMRQ
Trigger: CTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCC...TGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCTTTATTAAAGAAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp TTTATTTCTTTAATAAAGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCAAAGCCGGCTTTGGACTaGAGGCTCGGAAAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: FISLIKPFKVYSPILQGPKPALD*RLGKSV
Trigger: GACTGACTTTCCGAGCCTCCAGTCCAAAGCCGGCTT...TGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCTTTATTAAAGAAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp CCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTAATTTACTTAGACATTCTGCATGTTaGACAGGAGGTGTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: PHLVQGPNPQALALPNLLRHSAC*TGGVLF
Trigger: GAACAAGACACCTCCTGTCCAACATGCAGAATGTCT...AAGTAAATTAGGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
3UTR CAA 72 bp TCTTTAATAAAGCCCTTCAAGGTTTACTCTCCCATCTaGCAAGGCCCACATCTTGTTCAAGGACCAAACCCA +
Preference number: 4 (lower is better)
Translates to: SLIKPFKVYSPI*QGPHLVQGPNP
Trigger: TGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCTTTATTAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp GCAGTCCAGTCAACACCAGAAGAGATCATACCTACAGTTAAAATTTGCAGTGTTTGTTGTTATTTCAACTaGGCGTGTCAGCTGGAGGTC +
Preference number: 4 (lower is better)
Translates to: AVQSTPEEIIPTVKICSVCCYFN*ACQLEV
Trigger: GACCTCCAGCTGACACGCTCAGTTGAAATAACAACA...AACACTGCAAATTTTAACTGTAGGTATGATCTCTTCTGGTGTTGACTGGACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp TTTATTTCTTTAATAAAGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCAAGGTCTGATGCTATCTaGCCGCTGTGTAGGAAAAGG +
Preference number: 4 (lower is better)
Translates to: FISLIKPFKVYSPILQGPRSDAI*PLCRKR
Trigger: CCTTTTCCTACACAGCGGTCAGATAGCATCAGACCT...TGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCTTTATTAAAGAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp GCAGTCCAGTCAACACCAGAAGAGATCATACCTACAGTTAAAATTTGCAGTGTTTTGCAACTGCAAACCTaGCCTCCATGTTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: AVQSTPEEIIPTVKICSVLQLQT*PPCFQP
Trigger: TGGTTGGAAACATGGAGGCCAGGTTTGCAGTTGCAA...AACACTGCAAATTTTAACTGTAGGTATGATCTCTTCTGGTGTTGACTGGACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp TTTATTTCTTTAATAAAGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCATCCTGCAGTACCAGATaGTATGGAACCTGGGGAAAC +
Preference number: 4 (lower is better)
Translates to: FISLIKPFKVYSPILQGPSCSTR*YGTWGN
Trigger: GTTTCCCCAGGTTCCATACCATCTGGTACTGCAGGA...TGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCTTTATTAAAGAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp CCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTAATTTACTTCCTTACCTTCTCTGCTaGATTAAACCAGGAATAACA +
Preference number: 4 (lower is better)
Translates to: PHLVQGPNPQALALPNLLPYLLC*IKPGIT
Trigger: TGTTATTCCTGGTTTAATTCAGCAGAGAAGGTAAGG...AAGTAAATTAGGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR GCA 90 bp ATTGTGGATAATACTGGATTCTTCCCAAAAGGACTACCACAAAACAAAGCTTTCTGGGAGTTGCTGGCCTaGGTAATGCCAAGAATGTTG +
Preference number: 4 (lower is better)
Translates to: IVDNTGFFPKGLPQNKAFWELLA*VMPRML
Trigger: CAACATTCTTGGCATTACGCAGGCCAGCAACTCCCA...GAAAGCTTTGTTTTGTGGTAGTCCTTTTGGGAAGAATCCAGTATTATCCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CCA 90 bp ATTGTGGATAATACTGGATTCTTCCCAAAAGGACTACCACAAAACAAAGCTTTCCAATCCGAGACCTTGTaGAAAAGATGTCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: IVDNTGFFPKGLPQNKAFQSETL*KRCPQG
Trigger: GCCCTGTGGACATCTTTTCCACAAGGTCTCGGATTG...GAAAGCTTTGTTTTGTGGTAGTCCTTTTGGGAAGAATCCAGTATTATCCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000492830.5
CDS-3UTR GCA 90 bp GCAGTCCAGTCAACACCAGAAGAGATCATACCTACAGTTAAAATTTGCAGTGTTCACTATAAGACCACATaGTTTATACAGCGGCAATGC +
Preference number: 4 (lower is better)
Translates to: AVQSTPEEIIPTVKICSVHYKTT*FIQRQC
Trigger: GCATTGCCGCTGTATAAAGCATGTGGTCTTATAGTG...AACACTGCAAATTTTAACTGTAGGTATGATCTCTTCTGGTGTTGACTGGACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR TCA 90 bp TTTATTTCTTTAATAAAGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCATATCGTAAAATCACATaGGCAGTCCTCACTGTCACA +
Preference number: 4 (lower is better)
Translates to: FISLIKPFKVYSPILQGPYRKIT*AVLTVT
Trigger: TGTGACAGTGAGGACTGCTCATGTGATTTTACGATA...TGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCTTTATTAAAGAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS CCA 90 bp GTATTTACTAGAACCCACACGAAGAGGCTGTCTGAGAGCAGGTACTaGGCCACATCGCGGGCCCGGGGTCCCCCGGCGCTCGGCCGGGCG +
Preference number: 5 (lower is better)
Translates to: VFTRTHTKRLSESRY*ATSRARGPPALGRA
Trigger: CGCCCGGCCGAGCGCCGGGGGACCCCGGGCCCGCGATGTGGCCCAGTACCTGCTCTCAGACAGCCTCTTCGTGTGGGTTCTAGTAAATAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS TCA 90 bp GACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGCTaGGGAAGGCAAGGGAGCGCTAGGAGGTCTGCTGCTTCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: DRPPPVSRAQGAGGS*GRQGSARRSAASEA
Trigger: GGCTTCAGAAGCAGCAGACCTCCTAGCGCTCCCTTGCCTTCCTCAGCTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000566757.1
ENST00000568325.1
CDS CCA 90 bp ACTTGGAGAAGCGGCTCCCACGAGCCTCGAAGTCTTCCACCTCACTaGGCTCCACTTCCACCTCGCCGAAGTCCAGCGTCTCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: TWRSGSHEPRSLPPH*APLPPRRSPASPPG
Trigger: GCCTGGAGGAGACGCTGGACTTCGGCGAGGTGGAAGTGGAGCCCAGTGAGGTGGAAGACTTCGAGGCTCGTGGGAGCCGCTTCTCCAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
ENST00000568325.1
CDS-3UTR CAA 90 bp TTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGCTGAGGTCAGGACACCTGCATTaGTGGGACGTACGCATGAGG +
Preference number: 5 (lower is better)
Translates to: LGQASSSQSGTGRRRQLRSGHLH*WDVRMR
Trigger: CCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGA...CCTCAGCTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS TCA 90 bp CCACTTCCACCTCGCCGAAGTCCAGCGTCTCCTCCAGGCGAGGACTaGGGTCCAGTGGCACACGCTCGGTCTGAGCAGAAGTTTCTCCCT +
Preference number: 5 (lower is better)
Translates to: PLPPRRSPASPPGED*GPVAHARSEQKFLP
Trigger: AGGGAGAAACTTCTGCTCAGACCGAGCGTGTGCCACTGGACCTCAGTCCTCGCCTGGAGGAGACGCTGGACTTCGGCGAGGTGGAAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
CDS-3UTR CAA 90 bp ATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCCCCCCAGCTCCTCTGGAGTaGCAACTGCAAACCTGGCCT +
Preference number: 5 (lower is better)
Translates to: ITDVTPRRGGGLTLCASPPAPLE*QLQTWP
Trigger: AGGCCAGGTTTGCAGTTGCAACTCCAGAGGAGCTGG...GGGGGAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTAT
62% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp GGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCATCAGGACACCTGCATTaGTGGGACGTACGCATGAGG +
Preference number: 5 (lower is better)
Translates to: GRIGTGLLQSVGHRAQEASGHLH*WDVRMR
Trigger: CCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGA...TGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp TTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGCTGAGGCCGACGAATTCGACGTaGCACCTCATGAAACAGGTA +
Preference number: 5 (lower is better)
Translates to: LGQASSSQSGTGRRRQLRPTNST*HLMKQV
Trigger: TACCTGTTTCATGAGGTGCAACGTCGAATTCGTCGG...CCTCAGCTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp GCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGATGGCACAGTCGTCATaGTTGACAGCCAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: AELGQASSSQSGTGRRRQMAQSS*LTASSS
Trigger: AGAGGAGCTGGCTGTCAACAATGACGACTGTGCCAT...CTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp GCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGGAAACGTTTGCGAGCTaGCTGGAGGAGTTCGTCCTT +
Preference number: 5 (lower is better)
Translates to: AELGQASSSQSGTGRRRQETFAS*LEEFVL
Trigger: AAGGACGAACTCCTCCAGCAAGCTCGCAAACGTTTC...CTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp TTTCCATGGAGCGGGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGATGGAGCGGGCAGAATaGGGACAGGCCTCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: FPWSGQNWDRPPPVSRAQMERAE*GQASSS
Trigger: ACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCAT...CTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCATGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS GCA 90 bp CCTCCACCCACAGACACAGCACAGAACTCCCACAATCACAGGGTCTaGCAGGGCCCAAACCCACTTGAGGAACACAGTGCTGGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: PPPTDTAQNSHNHRV*QGPNPLEEHSAGPV
Trigger: GACAGGGCCAGCACTGTGTTCCTCAAGTGGGTTTGGGCCCTGGCAGACCCTGTGATTGTGGGAGTTCTGTGCTGTGTCTGTGGGTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566757.1
CDS CCA 90 bp CGTCCTTACGCTGCACCAGCATGCGCTGTCTCTCATCAGCAGACTTaGAGAAGCGGCTCCCACGAGCCTCGAAGTCTTCCACCTCACTGG +
Preference number: 5 (lower is better)
Translates to: RPYAAPACAVSHQQT*RSGSHEPRSLPPHW
Trigger: CCAGTGAGGTGGAAGACTTCGAGGCTCGTGGGAGCCGCTTCTCCAAGTCTGCTGATGAGAGACAGCGCATGCTGGTGCAGCGTAAGGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
ENST00000568325.1
CDS GCA 90 bp GTTTGCGAGCTTGCTGGAGGAGTTCGTCCTTACGCTGCACCAGCATaGGCTGTCTCTCATCAGCAGACTTGGAGAAGCGGCTCCCACGAG +
Preference number: 5 (lower is better)
Translates to: VCELAGGVRPYAAPA*AVSHQQTWRSGSHE
Trigger: CTCGTGGGAGCCGCTTCTCCAAGTCTGCTGATGAGAGACAGCGCATGCTGGTGCAGCGTAAGGACGAACTCCTCCAGCAAGCTCGCAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
ENST00000568325.1
CDS-3UTR CAA 90 bp TTTCCATGGAGCGGGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGCACAGTCGTCATTGTaGACAGCCAGCTCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: FPWSGQNWDRPPPVSRAQAQSSL*TASSSG
Trigger: TCCAGAGGAGCTGGCTGTCAACAATGACGACTGTGC...CTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCCCGCTCCATGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS GCA 90 bp AGGAAAGCAGCATGGCAACCAACAGGGACAGGACTCGACCGTGGCTaGTCATCGGCGTGGTGGGCGAGAAGGAAAGCTGAAATGCACACA +
Preference number: 5 (lower is better)
Translates to: RKAAWQPTGTGLDRG*SSAWWARRKAEMHT
Trigger: TGTGTGCATTTCAGCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCCACGGTCGAGTCCTGTCCCTGTTGGTTGCCATGCTGCTTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568657.1
CDS-3UTR CAA 90 bp TTTGATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCTTCCTGGTCACTGCTaGGCCTTTCCACAGGACTGT +
Preference number: 5 (lower is better)
Translates to: FDNRCYPTTWGRAHTVRLLPGHC*AFPQDC
Trigger: ACAGTCCTGTGGAAAGGCCAAGCAGTGACCAGGAAG...GAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTATCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS GCA 90 bp CAGGAGTTGTGGAAAAGATGTCCACAGGGCAGTTTCCGCGCAGCCTaGATGGAGTCCCAACAGATGGCACAGTCGTCATTGTTGACAGCC +
Preference number: 5 (lower is better)
Translates to: QELWKRCPQGSFRAA*MESQQMAQSSLLTA
Trigger: GGCTGTCAACAATGACGACTGTGCCATCTGTTGGGACTCCATGCAGGCTGCGCGGAAACTGCCCTGTGGACATCTTTTCCACAACTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000567738.1
CDS GCA 90 bp GAGACCTTGTGGAAAAGATGTCCACAGGGCAGTTTCCGCGCAGCCTaGATGGAGTCCCAACAGATGGCACAGTCGTCATTGTTGACAGCC +
Preference number: 5 (lower is better)
Translates to: ETLWKRCPQGSFRAA*MESQQMAQSSLLTA
Trigger: GGCTGTCAACAATGACGACTGTGCCATCTGTTGGGACTCCATGCAGGCTGCGCGGAAACTGCCCTGTGGACATCTTTTCCACAAGGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492830.5
CDS GCA 90 bp ACACCTGCTGTAGCTGCCACCAACCATGGGTGTGTGACGCACAGATaGGCTGAGTGTGTGTACAATGCTCAGCTGAAAGGCAGAGTGGTC +
Preference number: 5 (lower is better)
Translates to: TPAVAATNHGCVTHR*AECVYNAQLKGRVV
Trigger: GACCACTCTGCCTTTCAGCTGAGCATTGTACACACACTCAGCGCATCTGTGCGTCACACACCCATGGTTGGTGGCAGCTACAGCAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566757.1
CDS GCA 90 bp ATGACCAAGACATCCAGCCCCCAACAGATGGGCGCAAATTCTCTCTaGACCAGGGAGGAACCCTTCAGTGCTGTTCCCTGCTGTCTCTTC +
Preference number: 5 (lower is better)
Translates to: MTKTSSPQQMGANSL*TREEPFSAVPCCLF
Trigger: GAAGAGACAGCAGGGAACAGCACTGAAGGGTTCCTCCCTGGTGCAGAGAGAATTTGCGCCCATCTGTTGGGGGCTGGATGTCTTGGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566757.1
CDS CCA 90 bp CAGCAGGAAAGCAGCATGGCAACCAACAGGGACAGGACTCGACCGTaGCTGCTCATCGGCGTGGTGGGCGAGAAGGAAAGATATTCAAAT +
Preference number: 5 (lower is better)
Translates to: QQESSMATNRDRTRP*LLIGVVGEKERYSN
Trigger: ATTTGAATATCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCCACGGTCGAGTCCTGTCCCTGTTGGTTGCCATGCTGCTTTCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
CDS-3UTR CAA 90 bp GGCAGAATTGGGACAGGCCTCCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAAAACATGTGAAGAATTaGAAGAGATTTGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: GRIGTGLLQSVGHRAQEAKHVKN*KRFGTW
Trigger: CCAGGTCCCAAATCTCTTCAAATTCTTCACATGTTT...TGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGGAGGCCTGTCCCAATTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS TCA 90 bp CAGTTTCTTTTGTACTCGTGCCCTAAGCCTTGCAAGCTTCAGGACTaGGGAAGACCACTGTCGGGACCACATTCCCCCTCCACAGCTCCA +
Preference number: 5 (lower is better)
Translates to: QFLLYSCPKPCKLQD*GRPLSGPHSPSTAP
Trigger: TGGAGCTGTGGAGGGGGAATGTGGTCCCGACAGTGGTCTTCCTCAGTCCTGAAGCTTGCAAGGCTTAGGGCACGAGTACAAAAGAAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566334.1
CDS GCA 90 bp AGGAAAGCAGCATGGCAACCAACAGGGACAGGACTCGACCGTGGCTaGTCATCGGCGTGGTGGGCGAGAAGGAAAGATATTCAAATCGAT +
Preference number: 5 (lower is better)
Translates to: RKAAWQPTGTGLDRG*SSAWWARRKDIQID
Trigger: ATCGATTTGAATATCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCCACGGTCGAGTCCTGTCCCTGTTGGTTGCCATGCTGCTTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
CDS GCA 90 bp AGCTGGGAGTTGCTGGCCTGCGTAATGCCAAGAATGTTGGTGGTGTaGATCACTTCAACCGAAAAACTCGGCAGCCAGCTCGCAATCCGA +
Preference number: 5 (lower is better)
Translates to: SWELLACVMPRMLVV*ITSTEKLGSQLAIR
Trigger: TCGGATTGCGAGCTGGCTGCCGAGTTTTTCGGTTGAAGTGATGCACACCACCAACATTCTTGGCATTACGCAGGCCAGCAACTCCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000567738.1
ENST00000568762.1
CDS GCA 90 bp TTCAAGAAACGTTTGCGAGCTTGCTGGAGGAGTTCGTCCTTACGCTaGACCAGCATGCGCTGTCTCTCATCAGCAGACTTGGAGAAGCGG +
Preference number: 5 (lower is better)
Translates to: FKKRLRACWRSSSLR*TSMRCLSSADLEKR
Trigger: CCGCTTCTCCAAGTCTGCTGATGAGAGACAGCGCATGCTGGTGCAGCGTAAGGACGAACTCCTCCAGCAAGCTCGCAAACGTTTCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
ENST00000568325.1
CDS-3UTR CAA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCGCACAGTCGTCATTGTaGACAGCCAGCTCCTCTGGA +
Preference number: 5 (lower is better)
Translates to: LARPTSCSRTKPTGFSTAAQSSL*TASSSG
Trigger: TCCAGAGGAGCTGGCTGTCAACAATGACGACTGTGC...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp TTTGATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCCTGGGGAAACATCTCTaGAATCTGATGAGCCATTGC +
Preference number: 5 (lower is better)
Translates to: FDNRCYPTTWGRAHTVRLLGKHL*NLMSHC
Trigger: GCAATGGCTCATCAGATTCAAGAGATGTTTCCCCAG...GAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTATCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGCTTCCTGGTCACTGCTaGGCCTTTCCACAGGACTGT +
Preference number: 5 (lower is better)
Translates to: LYSGNAVKPAFPWSGQNWLPGHC*AFPQDC
Trigger: ACAGTCCTGTGGAAAGGCCAAGCAGTGACCAGGAAG...CCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp GTGGTGCTCAGGACACCTGCATTTGTGGGACGTACGCATGAGGCAGGAGTAGAAGAAACGTTTGCGAGCTaGCTGGAGGAGTTCGTCCTT +
Preference number: 5 (lower is better)
Translates to: VVLRTPAFVGRTHEAGVEETFAS*LEEFVL
Trigger: AAGGACGAACTCCTCCAGCAAGCTCGCAAACGTTTC...TTCTACTCCTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp TTATACAGCGGCAATGCAGTCAAGCCCGCTTTTCCATGGAGCGGGCAGAATTGGTGCAAGGCCCACATCTaGTTCAAGGACCAAACCCAC +
Preference number: 5 (lower is better)
Translates to: LYSGNAVKPAFPWSGQNWCKAHI*FKDQTH
Trigger: GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCA...CCAATTCTGCCCGCTCCATGGAAAAGCGGGCTTGACTGCATTGCCGCTGTATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS TCA 90 bp ACTCGACCGTGGCTGCTCATCGGCGTGGTGGGCGAGAAGGAAAGCTaGAATGCACACAGTAGGAAACTGCTCATTCTTCTTCATGGAAGT +
Preference number: 5 (lower is better)
Translates to: TRPWLLIGVVGEKES*NAHSRKLLILLHGS
Trigger: ACTTCCATGAAGAAGAATGAGCAGTTTCCTACTGTGTGCATTTCAGCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCCACGGTCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568657.1
CDS-3UTR CAA 90 bp TTCCCCTCCTCTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTATGGCACAGTCGTCATaGTTGACAGCCAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: FPSSAPGIEPRVPFPRCPMAQSS*LTASSS
Trigger: AGAGGAGCTGGCTGTCAACAATGACGACTGTGCCAT...AGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAGAGGAGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp GTGGTGCTCAGGACACCTGCATTTGTGGGACGTACGCATGAGGCAGGAGTAGAAATCCAAGTTCTCTCCTaGATGTTCTTCCCTGACACG +
Preference number: 5 (lower is better)
Translates to: VVLRTPAFVGRTHEAGVEIQVLS*MFFPDT
Trigger: CGTGTCAGGGAAGAACATCAAGGAGAGAACTTGGAT...TTCTACTCCTGCCTCATGCGTACGTCCCACAAATGCAGGTGTCCTGAGCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR CAA 90 bp CCCCACCCCAAGCAGTCCAGTCAACACCAGAAGAGATCATACCTACAGTTAAAAGCATTGAGCTGGGAGTaGCTGGCCTGCGTAATGCCA +
Preference number: 5 (lower is better)
Translates to: PHPKQSSQHQKRSYLQLKALSWE*LACVMP
Trigger: TGGCATTACGCAGGCCAGCAACTCCCAGCTCAATGC...TTTTAACTGTAGGTATGATCTCTTCTGGTGTTGACTGGACTGCTTGGGGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp AGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACGAAATCAAGCCGGCTTaGGACTGGAGGCTCGGAAAG +
Preference number: 5 (lower is better)
Translates to: RFTLPSCKAHILFKDQTHEIKPA*DWRLGK
Trigger: CTTTCCGAGCCTCCAGTCCAAAGCCGGCTTGATTTC...GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS TCA 90 bp GTGGTGGGCGAGAAGGAAAGATATTCAAATCGATCCTTGCAGAGCTaGACCATCAGGTGCAGAAAGACAAGTCCGGCAAACCAGAGGCAC +
Preference number: 5 (lower is better)
Translates to: VVGEKERYSNRSLQS*TIRCRKTSPANQRH
Trigger: GTGCCTCTGGTTTGCCGGACTTGTCTTTCTGCACCTGATGGTTCAGCTCTGCAAGGATCGATTTGAATATCTTTCCTTCTCGCCCACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
CDS GCA 90 bp CAGCTAGCAGACCTTACCATTGCATTGAGCTGGGAGTTGCTGGCCTaGGTAATGCCAAGAATGTTGGTGGTGTGCATCACTTCAACCGAA +
Preference number: 5 (lower is better)
Translates to: QLADLTIALSWELLA*VMPRMLVVCITSTE
Trigger: TTCGGTTGAAGTGATGCACACCACCAACATTCTTGGCATTACGCAGGCCAGCAACTCCCAGCTCAATGCAATGGTAAGGTCTGCTAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568762.1
CDS-3UTR CAA 90 bp CTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCCTGGGGAAACATCTCTaGAATCTGATGAGCCATTGC +
Preference number: 5 (lower is better)
Translates to: LARPTSCSRTKPTGFSTALGKHL*NLMSHC
Trigger: GCAATGGCTCATCAGATTCAAGAGATGTTTCCCCAG...GGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp TTCCCCTCCTCTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTACCATAAACCAAAGCTaGCTGCCTAACCACTCCCCA +
Preference number: 5 (lower is better)
Translates to: FPSSAPGIEPRVPFPRCPTINQS*LPNHSP
Trigger: TGGGGAGTGGTTAGGCAGCAAGCTTTGGTTTATGGT...AGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAGAGGAGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp AGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACCAAACCCACTGCAAGGCCCACATCTaGTTCAAGGACCAAACCCAC +
Preference number: 5 (lower is better)
Translates to: RFTLPSCKAHILFKDQTHCKAHI*FKDQTH
Trigger: GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCA...GTGGGTTTGGTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS TCA 90 bp CCTGGTCACTGCTTGGCCTTTCCACAGGACTGTTCAATGCAGGTCTaGTGCTATCTGACCGCTGGAAGAGAAACAGTACCAAAAACAGTC +
Preference number: 5 (lower is better)
Translates to: PGHCLAFPQDCSMQV*CYLTAGRETVPKTV
Trigger: GACTGTTTTTGGTACTGTTTCTCTTCCAGCGGTCAGATAGCATCAGACCTGCATTGAACAGTCCTGTGGAAAGGCCAAGCAGTGACCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563285.1
CDS TCA 90 bp GCAGTAACACGCATGGAGCTGTCATCTCCATCGAAATGGAAGAAGTaGTTGTGTTGGTTTAAGCGAGGTCTCCCTTCGGCTGCTGCTACA +
Preference number: 5 (lower is better)
Translates to: AVTRMELSSPSKWKK*LCWFKRGLPSAAAT
Trigger: TGTAGCAGCAGCCGAAGGGAGACCTCGCTTAAACCAACACAATCACTTCTTCCATTTCGATGGAGATGACAGCTCCATGCGTGTTACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567738.1
CDS-3UTR CAA 90 bp AAGAATTTGAAGAGATTTGGGACCTGGGCCCTCTCCAAGGCAGGTAGGTTCACACCGACGAATTCGACGTaGCACCTCATGAAACAGGTA +
Preference number: 5 (lower is better)
Translates to: KNLKRFGTWALSKAGRFTPTNST*HLMKQV
Trigger: TACCTGTTTCATGAGGTGCAACGTCGAATTCGTCGG...TGTGAACCTACCTGCCTTGGAGAGGGCCCAGGTCCCAAATCTCTTCAAATTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp TTTGATAACAGATGTTACCCCACGACGTGGGGGCGGGCTCACACTGTGCGCCTCTCATCTTCAGAACTTTaGTTCAAGAAACGTTTGCGA +
Preference number: 5 (lower is better)
Translates to: FDNRCYPTTWGRAHTVRLSSSEL*FKKRLR
Trigger: TCGCAAACGTTTCTTGAACAAAAGTTCTGAAGATGA...GAGGCGCACAGTGTGAGCCCGCCCCCACGTCGTGGGGTAACATCTGTTATCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp GCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGGGAACAACGACAGCAGTTaGATAACAGATGTTACCCCA +
Preference number: 5 (lower is better)
Translates to: APGIEPRVPFPRCPAGSGNNDSS*ITDVTP
Trigger: TGGGGTAACATCTGTTATCAAACTGCTGTCGTTGTT...CCCTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp GGACTGGAGGCTCGGAAAGTCAGTCCCAGATGTAGTGGGACAGAAAGGGGTGACAAACATGTGAAGAATTaGAAGAGATTTGGGACCTGG +
Preference number: 5 (lower is better)
Translates to: GLEARKVSPRCSGTERGDKHVKN*KRFGTW
Trigger: CCAGGTCCCAAATCTCTTCAAATTCTTCACATGTTT...GTCACCCCTTTCTGTCCCACTACATCTGGGACTGACTTTCCGAGCCTCCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS TCA 90 bp GCTTGGCCTTTCCACAGGACTGTTCAATGCAGGTCTGATGCTATCTaGCCGCTGGAAGAGAAACAGTACCAAAAACAGTCCAGAGTCACA +
Preference number: 5 (lower is better)
Translates to: AWPFHRTVQCRSDAI*PLEEKQYQKQSRVT
Trigger: TGTGACTCTGGACTGTTTTTGGTACTGTTTCTCTTCCAGCGGTCAGATAGCATCAGACCTGCATTGAACAGTCCTGTGGAAAGGCCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563285.1
CDS-3UTR CAA 90 bp AGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCACATCTTGTTCAAGGACTTGTTCAAGAAACGTTaGCGAGCTTGCTGGAGGAGT +
Preference number: 5 (lower is better)
Translates to: SPSRFTLPSCKAHILFKDLFKKR*RACWRS
Trigger: ACTCCTCCAGCAAGCTCGCAAACGTTTCTTGAACAA...GTCCTTGAACAAGATGTGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp CCACATCTTGTTCAAGGACCAAACCCACAGGCTTTAGCACTGCCTAATTTACTTGAAATCAAGCCGGCTTaGGACTGGAGGCTCGGAAAG +
Preference number: 5 (lower is better)
Translates to: PHLVQGPNPQALALPNLLEIKPA*DWRLGK
Trigger: CTTTCCGAGCCTCCAGTCCAAAGCCGGCTTGATTTC...AAGTAAATTAGGCAGTGCTAAAGCCTGTGGGTTTGGTCCTTGAACAAGATGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS TCA 90 bp TGTAATAGACATACGTCCCCTTTCCTTCCCACGTCCCTTCGTGGTTaGGGTCCCAGAGGTGAATTACGTATCGTAAAATCACATGAGCAG +
Preference number: 5 (lower is better)
Translates to: CNRHTSPFLPTSLRG*GPRGELRIVKSHEQ
Trigger: CTGCTCATGTGATTTTACGATACGTAATTCACCTCTGGGACCTCAACCACGAAGGGACGTGGGAAGGAAAGGGGACGTATGTCTATTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
CDS-3UTR CAA 90 bp CCCCACCCCAAGCAGTCCAGTCAACACCAGAAGAGATCATACCTACAGTTAAAAGAACGAAGACAGGAGTaGTGGAAAAGATGTCCACAG +
Preference number: 5 (lower is better)
Translates to: PHPKQSSQHQKRSYLQLKERRQE*WKRCPQ
Trigger: CTGTGGACATCTTTTCCACAACTCCTGTCTTCGTTC...TTTTAACTGTAGGTATGATCTCTTCTGGTGTTGACTGGACTGCTTGGGGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR CAA 90 bp GCAGTCCAGTCAACACCAGAAGAGATCATACCTACAGTTAAAATTTGCAGTGTTCTCTCATCAGCAGACTaGGAGAAGCGGCTCCCACGA +
Preference number: 5 (lower is better)
Translates to: AVQSTPEEIIPTVKICSVLSSAD*EKRLPR
Trigger: TCGTGGGAGCCGCTTCTCCAAGTCTGCTGATGAGAG...AACACTGCAAATTTTAACTGTAGGTATGATCTCTTCTGGTGTTGACTGGACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp CCCCACCCCAAGCAGTCCAGTCAACACCAGAAGAGATCATACCTACAGTTAAAATTGTTCAAGAAACGTTaGCGAGCTTGCTGGAGGAGT +
Preference number: 5 (lower is better)
Translates to: PHPKQSSQHQKRSYLQLKLFKKR*RACWRS
Trigger: ACTCCTCCAGCAAGCTCGCAAACGTTTCTTGAACAA...TTTTAACTGTAGGTATGATCTCTTCTGGTGTTGACTGGACTGCTTGGGGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS CCA 90 bp AGATGCTGTCTCTCACTCACTCGAAGAGGGCCAAACACAATACACTaGATGAGCTTAGCCACCAACATCAAAACACAGCAAGCGGTATTT +
Preference number: 5 (lower is better)
Translates to: RCCLSLTRRGPNTIH*MSLATNIKTQQAVF
Trigger: AAATACCGCTTGCTGTGTTTTGATGTTGGTGGCTAAGCTCATCCAGTGTATTGTGTTTGGCCCTCTTCGAGTGAGTGAGAGACAGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
ENST00000568657.1
CDS-3UTR CAA 90 bp TTTATTTCTTTAATAAAGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCAGCATTGAGCTGGGAGTaGCTGGCCTGCGTAATGCCA +
Preference number: 5 (lower is better)
Translates to: FISLIKPFKVYSPILQGPALSWE*LACVMP
Trigger: TGGCATTACGCAGGCCAGCAACTCCCAGCTCAATGC...TGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCTTTATTAAAGAAATAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp CTGCTCCAGGTATCGAACCAAGAGTTCCTTTTCCAAGATGCCCTGCTGGCTCAGTCATCTTCAGAACTTTaGTTCAAGAAACGTTTGCGA +
Preference number: 5 (lower is better)
Translates to: LLQVSNQEFLFQDALLAQSSSEL*FKKRLR
Trigger: TCGCAAACGTTTCTTGAACAAAAGTTCTGAAGATGA...CTGAGCCAGCAGGGCATCTTGGAAAAGGAACTCTTGGTTCGATACCTGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS CCA 90 bp CCTTCTAAAATATTGTCTGTTGTTATTTCAACTGAGCGTGTCAGCTaGAGGTCCTGCAGTACCAGATGGTATGGAACCTGGGGAAACATC +
Preference number: 5 (lower is better)
Translates to: PSKILSVVISTERVS*RSCSTRWYGTWGNI
Trigger: GATGTTTCCCCAGGTTCCATACCATCTGGTACTGCAGGACCTCCAGCTGACACGCTCAGTTGAAATAACAACAGACAATATTTTAGAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000566334.1
ENST00000567738.1
CDS CCA 90 bp CTTTCCACAGGACTGTTCAATGCAGGTCTGATGCTATCTGACCGCTaGAAGAGAAACAGTACCAAAAACAGTCCAGAGTCACACAGAAAT +
Preference number: 5 (lower is better)
Translates to: LSTGLFNAGLMLSDR*KRNSTKNSPESHRN
Trigger: ATTTCTGTGTGACTCTGGACTGTTTTTGGTACTGTTTCTCTTCCAGCGGTCAGATAGCATCAGACCTGCATTGAACAGTCCTGTGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563285.1
CDS-3UTR CAA 90 bp ATTGTGGATAATACTGGATTCTTCCCAAAAGGACTACCACAAAACAAAGCTTTCCCAGCTCCTCTGGAGTaGCAACTGCAAACCTGGCCT +
Preference number: 5 (lower is better)
Translates to: IVDNTGFFPKGLPQNKAFPAPLE*QLQTWP
Trigger: AGGCCAGGTTTGCAGTTGCAACTCCAGAGGAGCTGG...GAAAGCTTTGTTTTGTGGTAGTCCTTTTGGGAAGAATCCAGTATTATCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp ATTGTGGATAATACTGGATTCTTCCCAAAAGGACTACCACAAAACAAAGCTTTCCTCTCATCAGCAGACTaGGAGAAGCGGCTCCCACGA +
Preference number: 5 (lower is better)
Translates to: IVDNTGFFPKGLPQNKAFLSSAD*EKRLPR
Trigger: TCGTGGGAGCCGCTTCTCCAAGTCTGCTGATGAGAG...GAAAGCTTTGTTTTGTGGTAGTCCTTTTGGGAAGAATCCAGTATTATCCACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp TTTATTTCTTTAATAAAGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCATCGCAATCCGAGACCTaGTGGAAAAGATGTCCACAG +
Preference number: 5 (lower is better)
Translates to: FISLIKPFKVYSPILQGPSQSET*WKRCPQ
Trigger: CTGTGGACATCTTTTCCACAAGGTCTCGGATTGCGA...TGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCTTTATTAAAGAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492830.5
CDS-3UTR CAA 90 bp ATTGTGGATAATACTGGATTCTTCCCAAAAGGACTACCACAAAACAAAGCTTTCACCATAAACCAAAGCTaGCTGCCTAACCACTCCCCA +
Preference number: 5 (lower is better)
Translates to: IVDNTGFFPKGLPQNKAFTINQS*LPNHSP
Trigger: TGGGGAGTGGTTAGGCAGCAAGCTTTGGTTTATGGT...GAAAGCTTTGTTTTGTGGTAGTCCTTTTGGGAAGAATCCAGTATTATCCACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS TCA 90 bp GAACATGCAAGGAGACAAGATCCAAGAAGCCATATTAAATCCAAGTaGGGCTTTAAATCCTGGAGAAACTTTTCTGATCACTGCGGGATT +
Preference number: 5 (lower is better)
Translates to: EHARRQDPRSHIKSK*GFKSWRNFSDHCGI
Trigger: AATCCCGCAGTGATCAGAAAAGTTTCTCCAGGATTTAAAGCCTCACTTGGATTTAATATGGCTTCTTGGATCTTGTCTCCTTGCATGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564283.1
CDS-3UTR CAA 90 bp TTTATTTCTTTAATAAAGCCCTTCAAGGTTTACTCTCCCATCTTGCAAGGCCCATCCCTGACACGATTATaGTCGGCAATATTAAGAGAC +
Preference number: 5 (lower is better)
Translates to: FISLIKPFKVYSPILQGPSLTRL*SAILRD
Trigger: GTCTCTTAATATTGCCGACAATAATCGTGTCAGGGA...TGGGCCTTGCAAGATGGGAGAGTAAACCTTGAAGGGCTTTATTAAAGAAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS-3UTR CAA 90 bp ATTGTGGATAATACTGGATTCTTCCCAAAAGGACTACCACAAAACAAAGCTTTCAACAACGACAGCAGTTaGATAACAGATGTTACCCCA +
Preference number: 5 (lower is better)
Translates to: IVDNTGFFPKGLPQNKAFNNDSS*ITDVTP
Trigger: TGGGGTAACATCTGTTATCAAACTGCTGTCGTTGTT...GAAAGCTTTGTTTTGTGGTAGTCCTTTTGGGAAGAATCCAGTATTATCCACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290649.10
ENST00000492830.5
CDS-3UTR CAA 90 bp ATTGTGGATAATACTGGATTCTTCCCAAAAGGACTACCACAAAACAAAGCTTTCTTCCAAAATTTGTCTTaGAGATGCTGTCTCTCACTC +
Preference number: 5 (lower is better)
Translates to: IVDNTGFFPKGLPQNKAFFQNLS*RCCLSL
Trigger: GAGTGAGAGACAGCATCTCAAAGACAAATTTTGGAA...GAAAGCTTTGTTTTGTGGTAGTCCTTTTGGGAAGAATCCAGTATTATCCACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS CCA 90 bp GTGGGACTAATTATAACAAATGAGTTGCATATCATACTATCAACTTaGAATATTAATCTCTCAGTCATTTACAGCCCACTTTCAACCCCA +
Preference number: 5 (lower is better)
Translates to: VGLIITNELHIILST*NINLSVIYSPLSTP
Trigger: TGGGGTTGAAAGTGGGCTGTAAATGACTGAGAGATTAATATTCCAAGTTGATAGTATGATATGCAACTCATTTGTTATAATTAGTCCCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564283.1
CDS TCA 72 bp CCTCGCCGAAGTCCAGCGTCTCCTCCAGGCGAGGACTaGGGTCCAGTGGCACACGCTCGGTCTGGACACGGG +
Preference number: 6 (lower is better)
Translates to: PRRSPASPPGED*GPVAHARSGHG
Trigger: CCCGTGTCCAGACCGAGCGTGTGCCACTGGACCTCAGTCCTCGCCTGGAGGAGACGCTGGACTTCGGCGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568325.1
CDS TCA 72 bp CCTCCAGTCAGTCGGGCACAGGGCGCAGGAGGCAGCTaGGGAAGGCAAGGGAGCGCTAGGAGGTCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: PPVSRAQGAGGS*GRQGSARRSAA
Trigger: AGCAGCAGACCTCCTAGCGCTCCCTTGCCTTCCTCAGCTGCCTCCTGCGCCCTGTGCCCGACTGACTGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000566757.1
ENST00000568325.1
CDS TCA 72 bp CCTCGCCGAAGTCCAGCGTCTCCTCCAGGCGAGGACTaGGGTCCAGTGGCACACGCTCGGTCTGAGCAGAAG +
Preference number: 6 (lower is better)
Translates to: PRRSPASPPGED*GPVAHARSEQK
Trigger: CTTCTGCTCAGACCGAGCGTGTGCCACTGGACCTCAGTCCTCGCCTGGAGGAGACGCTGGACTTCGGCGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
CDS CCA 72 bp AGCAGACGGCCGCCAGTCCACAGCAGGAAAGCAGCATaGCAACCAACAGGGACAGGACTCGACCGTGGCTGC +
Preference number: 6 (lower is better)
Translates to: SRRPPVHSRKAA*QPTGTGLDRGC
Trigger: GCAGCCACGGTCGAGTCCTGTCCCTGTTGGTTGCCATGCTGCTTTCCTGCTGTGGACTGGCGGCCGTCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
ENST00000568657.1
CDS CCA 72 bp AGCGGCTCCCACGAGCCTCGAAGTCTTCCACCTCACTaGGCTCCACTTCCACCTCGCCGAAGTCCAGCGTCT +
Preference number: 6 (lower is better)
Translates to: SGSHEPRSLPPH*APLPPRRSPAS
Trigger: AGACGCTGGACTTCGGCGAGGTGGAAGTGGAGCCCAGTGAGGTGGAAGACTTCGAGGCTCGTGGGAGCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
ENST00000568325.1
CDS CCA 72 bp GTCCAGCGTCTCCTCCAGGCGAGGACTGAGGTCCAGTaGCACACGCTCGGTCTGAGCAGAAGTTTCTCCCTC +
Preference number: 6 (lower is better)
Translates to: VQRLLQARTEVQ*HTLGLSRSFSL
Trigger: GAGGGAGAAACTTCTGCTCAGACCGAGCGTGTGCCACTGGACCTCAGTCCTCGCCTGGAGGAGACGCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
CDS CCA 72 bp AGCAGCATGGCAACCAACAGGGACAGGACTCGACCGTaGCTGCTCATCGGCGTGGTGGGCGAGAAGGAAAGC +
Preference number: 6 (lower is better)
Translates to: SSMATNRDRTRP*LLIGVVGEKES
Trigger: GCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCCACGGTCGAGTCCTGTCCCTGTTGGTTGCCATGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568657.1
CDS GCA 72 bp GCATGGCAACCAACAGGGACAGGACTCGACCGTGGCTaGTCATCGGCGTGGTGGGCGAGAAGGAAAGCTGAA +
Preference number: 6 (lower is better)
Translates to: AWQPTGTGLDRG*SSAWWARRKAE
Trigger: TTCAGCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCCACGGTCGAGTCCTGTCCCTGTTGGTTGCCATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568657.1
CDS CCA 72 bp AGCAGCATGGCAACCAACAGGGACAGGACTCGACCGTaGCTGCTCATCGGCGTGGTGGGCGAGAAGGAAAGA +
Preference number: 6 (lower is better)
Translates to: SSMATNRDRTRP*LLIGVVGEKER
Trigger: TCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCCACGGTCGAGTCCTGTCCCTGTTGGTTGCCATGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
CDS CCA 72 bp GGGACAGGACTCGACCGTGGCTGCTCATCGGCGTGGTaGGCGAGAAGGAAAGCTGAAATGCACACAGTAGGA +
Preference number: 6 (lower is better)
Translates to: GTGLDRGCSSAW*ARRKAEMHTVG
Trigger: TCCTACTGTGTGCATTTCAGCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCCACGGTCGAGTCCTGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568657.1
CDS CAA 90 bp CGCGCAGCCTGCATGGAGTCCCAACAGATGGCACAGTCGTCATTGTaGACAGCCAGCTCCTCTGGAGTTGCAACTGCAAACCTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: RAACMESQQMAQSSL*TASSSGVATANLAS
Trigger: GGAGGCCAGGTTTGCAGTTGCAACTCCAGAGGAGCTGGCTGTCAACAATGACGACTGTGCCATCTGTTGGGACTCCATGCAGGCTGCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000567738.1
CDS CAA 90 bp TCGTCCTTACGCTGCACCAGCATGCGCTGTCTCTCATCAGCAGACTaGGAGAAGCGGCTCCCACGAGCCTCGAAGTCTTCCACCTCACTG +
Preference number: 6 (lower is better)
Translates to: SSLRCTSMRCLSSAD*EKRLPRASKSSTSL
Trigger: CAGTGAGGTGGAAGACTTCGAGGCTCGTGGGAGCCGCTTCTCCAAGTCTGCTGATGAGAGACAGCGCATGCTGGTGCAGCGTAAGGACGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
ENST00000568325.1
CDS CAA 90 bp TTCCGCGCAGCCTGCATGGAGTCCCAACAGATGGCACAGTCGTCATaGTTGACAGCCAGCTCCTCTGGAGTTGCAACTGCAAACCTGGCC +
Preference number: 6 (lower is better)
Translates to: FRAACMESQQMAQSS*LTASSSGVATANLA
Trigger: GGCCAGGTTTGCAGTTGCAACTCCAGAGGAGCTGGCTGTCAACAATGACGACTGTGCCATCTGTTGGGACTCCATGCAGGCTGCGCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000567738.1
CDS GCA 72 bp GCATGGCAACCAACAGGGACAGGACTCGACCGTGGCTaGTCATCGGCGTGGTGGGCGAGAAGGAAAGATATT +
Preference number: 6 (lower is better)
Translates to: AWQPTGTGLDRG*SSAWWARRKDI
Trigger: AATATCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCCACGGTCGAGTCCTGTCCCTGTTGGTTGCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
CDS GCA 72 bp CTTGCTGGAGGAGTTCGTCCTTACGCTGCACCAGCATaGGCTGTCTCTCATCAGCAGACTTGGAGAAGCGGC +
Preference number: 6 (lower is better)
Translates to: LAGGVRPYAAPA*AVSHQQTWRSG
Trigger: GCCGCTTCTCCAAGTCTGCTGATGAGAGACAGCGCATGCTGGTGCAGCGTAAGGACGAACTCCTCCAGCAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
ENST00000568325.1
CDS CCA 72 bp ACAGGGACAGGACTCGACCGTGGCTGCTCATCGGCGTaGTGGGCGAGAAGGAAAGCTGAAATGCACACAGTA +
Preference number: 6 (lower is better)
Translates to: TGTGLDRGCSSA*WARRKAEMHTV
Trigger: TACTGTGTGCATTTCAGCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCCACGGTCGAGTCCTGTCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568657.1
CDS CAA 72 bp CCCACAATCACAGGGTCTGCCAGGGCCCAAACCCACTaGAGGAACACAGTGCTGGCCCTGTCCTTAAGAGCT +
Preference number: 6 (lower is better)
Translates to: PTITGSARAQTH*RNTVLALSLRA
Trigger: AGCTCTTAAGGACAGGGCCAGCACTGTGTTCCTCAAGTGGGTTTGGGCCCTGGCAGACCCTGTGATTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566757.1
CDS TCA 72 bp TTGTACTCGTGCCCTAAGCCTTGCAAGCTTCAGGACTaGGGAAGACCACTGTCGGGACCACATTCCCCCTCC +
Preference number: 6 (lower is better)
Translates to: LYSCPKPCKLQD*GRPLSGPHSPS
Trigger: GGAGGGGGAATGTGGTCCCGACAGTGGTCTTCCTCAGTCCTGAAGCTTGCAAGGCTTAGGGCACGAGTACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566334.1
CDS TCA 72 bp CGCACAGATGCGCTGAGTGTGTGTACAATGCTCAGCTaGAAGGCAGAGTGGTCAACAGGGAGGACCTGGGAG +
Preference number: 6 (lower is better)
Translates to: RTDALSVCTMLS*KAEWSTGRTWE
Trigger: CTCCCAGGTCCTCCCTGTTGACCACTCTGCCTTTCAGCTGAGCATTGTACACACACTCAGCGCATCTGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566757.1
CDS GCA 72 bp CGTTTGCGAGCTTGCTGGAGGAGTTCGTCCTTACGCTaGACCAGCATGCGCTGTCTCTCATCAGCAGACTTG +
Preference number: 6 (lower is better)
Translates to: RLRACWRSSSLR*TSMRCLSSADL
Trigger: CAAGTCTGCTGATGAGAGACAGCGCATGCTGGTGCAGCGTAAGGACGAACTCCTCCAGCAAGCTCGCAAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
ENST00000568325.1
CDS GCA 72 bp GCTGGAACAAAACCCCCTCTATCCACAGGACACACCTaGTGTAGCTGCCACCAACCATGGGTGTGTGACGCA +
Preference number: 6 (lower is better)
Translates to: AGTKPPLSTGHT*CSCHQPWVCDA
Trigger: TGCGTCACACACCCATGGTTGGTGGCAGCTACAGCAGGTGTGTCCTGTGGATAGAGGGGGTTTTGTTCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566757.1
CDS CCA 72 bp GGGACAGGACTCGACCGTGGCTGCTCATCGGCGTGGTaGGCGAGAAGGAAAGATATTCAAATCGATCCTTGC +
Preference number: 6 (lower is better)
Translates to: GTGLDRGCSSAW*ARRKDIQIDPC
Trigger: GCAAGGATCGATTTGAATATCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCCACGGTCGAGTCCTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
CDS GCA 72 bp ACAGACACAGCACAGAACTCCCACAATCACAGGGTCTaGCAGGGCCCAAACCCACTTGAGGAACACAGTGCT +
Preference number: 6 (lower is better)
Translates to: TDTAQNSHNHRV*QGPNPLEEHSA
Trigger: AGCACTGTGTTCCTCAAGTGGGTTTGGGCCCTGGCAGACCCTGTGATTGTGGGAGTTCTGTGCTGTGTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566757.1
CDS CCA 72 bp ACAGGGACAGGACTCGACCGTGGCTGCTCATCGGCGTaGTGGGCGAGAAGGAAAGATATTCAAATCGATCCT +
Preference number: 6 (lower is better)
Translates to: TGTGLDRGCSSA*WARRKDIQIDP
Trigger: AGGATCGATTTGAATATCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCCACGGTCGAGTCCTGTCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
CDS CAA 72 bp GCCTGCATGGAGTCCCAACAGATGGCACAGTCGTCATaGTTGACAGCCAGCTCCTCTGGAGTTGCAACTGCA +
Preference number: 6 (lower is better)
Translates to: ACMESQQMAQSS*LTASSSGVATA
Trigger: TGCAGTTGCAACTCCAGAGGAGCTGGCTGTCAACAATGACGACTGTGCCATCTGTTGGGACTCCATGCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000567738.1
CDS CAA 90 bp CACAGAACTCCCACAATCACAGGGTCTGCCAGGGCCCAAACCCACTaGAGGAACACAGTGCTGGCCCTGTCCTTAAGAGCTGGAACAAAA +
Preference number: 6 (lower is better)
Translates to: HRTPTITGSARAQTH*RNTVLALSLRAGTK
Trigger: TTTTGTTCCAGCTCTTAAGGACAGGGCCAGCACTGTGTTCCTCAAGTGGGTTTGGGCCCTGGCAGACCCTGTGATTGTGGGAGTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566757.1
CDS GCA 72 bp CGGTCTGAGCAGAAGTTTCTCCCTCTTCCTGGTCACTaGTTGGCCTTTCCACAGGACTGTTCAATGCAGGTC +
Preference number: 6 (lower is better)
Translates to: RSEQKFLPLPGH*LAFPQDCSMQV
Trigger: GACCTGCATTGAACAGTCCTGTGGAAAGGCCAAGCAGTGACCAGGAAGAGGGAGAAACTTCTGCTCAGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
ENST00000567738.1
CDS CCA 72 bp GATGGCACAGTCGTCATTGTTGACAGCCAGCTCCTCTaGAGTTGCAACTGCAAACCTGGCCTCCATGTTTCC +
Preference number: 6 (lower is better)
Translates to: DGTVVIVDSQLL*SCNCKPGLHVS
Trigger: GGAAACATGGAGGCCAGGTTTGCAGTTGCAACTCCAGAGGAGCTGGCTGTCAACAATGACGACTGTGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000567738.1
CDS CCA 72 bp CTTGAGGAACACAGTGCTGGCCCTGTCCTTAAGAGCTaGAACAAAACCCCCTCTATCCACAGGACACACCTG +
Preference number: 6 (lower is better)
Translates to: LEEHSAGPVLKS*NKTPSIHRTHL
Trigger: CAGGTGTGTCCTGTGGATAGAGGGGGTTTTGTTCCAGCTCTTAAGGACAGGGCCAGCACTGTGTTCCTCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566757.1
CDS TCA 72 bp GTCAGAGGACGCACCTTCCGAGGGGAGGAAGCTCTCTaGGGCCGCATCATCTTCAGAACTTTTGTTCAAGAA +
Preference number: 6 (lower is better)
Translates to: VRGRTFRGEEAL*GRIIFRTFVQE
Trigger: TTCTTGAACAAAAGTTCTGAAGATGATGCGGCCTCAGAGAGCTTCCTCCCCTCGGAAGGTGCGTCCTCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
ENST00000566757.1
ENST00000568325.1
CDS GCA 72 bp TTGCTGGCCTGCGTAATGCCAAGAATGTTGGTGGTGTaGATCACTTCAACCGAAAAACTCGGCAGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: LLACVMPRMLVV*ITSTEKLGSQL
Trigger: GAGCTGGCTGCCGAGTTTTTCGGTTGAAGTGATGCACACCACCAACATTCTTGGCATTACGCAGGCCAGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000567738.1
ENST00000568762.1
CDS CCA 72 bp GCGTGTCAGCTGGAGGTCCTGCAGTACCAGATGGTATaGAACCTGGGGAAACATCTCTTGAATCTGATGAGC +
Preference number: 6 (lower is better)
Translates to: ACQLEVLQYQMV*NLGKHLLNLMS
Trigger: GCTCATCAGATTCAAGAGATGTTTCCCCAGGTTCCATACCATCTGGTACTGCAGGACCTCCAGCTGACACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000566334.1
ENST00000567738.1
CDS CAA 72 bp TGCATGGAGTCCCAACAGATGGCACAGTCGTCATTGTaGACAGCCAGCTCCTCTGGAGTTGCAACTGCAAAC +
Preference number: 6 (lower is better)
Translates to: CMESQQMAQSSL*TASSSGVATAN
Trigger: GTTTGCAGTTGCAACTCCAGAGGAGCTGGCTGTCAACAATGACGACTGTGCCATCTGTTGGGACTCCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000567738.1
CDS CAA 72 bp AGCTGGGAGTTGCTGGCCTGCGTAATGCCAAGAATGTaGGTGGTGTGCATCACTTCAACCGAAAAACTCGGC +
Preference number: 6 (lower is better)
Translates to: SWELLACVMPRM*VVCITSTEKLG
Trigger: GCCGAGTTTTTCGGTTGAAGTGATGCACACCACCAACATTCTTGGCATTACGCAGGCCAGCAACTCCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000567738.1
ENST00000568762.1
CDS CAA 72 bp CAGCTAGCAGACCTTACCATTGCATTGAGCTGGGAGTaGCTGGCCTGCGTAATGCCAAGAATGTTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: QLADLTIALSWE*LACVMPRMLVV
Trigger: CACCACCAACATTCTTGGCATTACGCAGGCCAGCAACTCCCAGCTCAATGCAATGGTAAGGTCTGCTAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568762.1
CDS CAA 90 bp ATTGCATTGAGCTGGGAGTTGCTGGCCTGCGTAATGCCAAGAATGTaGGTGGTGTGCATCACTTCAACCGAAAAACTCGGCAGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: IALSWELLACVMPRM*VVCITSTEKLGSQL
Trigger: GAGCTGGCTGCCGAGTTTTTCGGTTGAAGTGATGCACACCACCAACATTCTTGGCATTACGCAGGCCAGCAACTCCCAGCTCAATGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000567738.1
ENST00000568762.1
CDS TCA 72 bp CAGCTCGCAATCCGAGACCCATCGAAATGGAAGAAGTaGTTGTGTTGGTTTAAGCGAGGTCTCCCTTCGGCT +
Preference number: 6 (lower is better)
Translates to: QLAIRDPSKWKK*LCWFKRGLPSA
Trigger: AGCCGAAGGGAGACCTCGCTTAAACCAACACAATCACTTCTTCCATTTCGATGGGTCTCGGATTGCGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290649.10
CDS TCA 72 bp TGGCTGCTCATCGGCGTGGTGGGCGAGAAGGAAAGCTaGAATGCACACAGTAGGAAACTGCTCATTCTTCTT +
Preference number: 6 (lower is better)
Translates to: WLLIGVVGEKES*NAHSRKLLILL
Trigger: AAGAAGAATGAGCAGTTTCCTACTGTGTGCATTTCAGCTTTCCTTCTCGCCCACCACGCCGATGAGCAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568657.1
CDS GCA 72 bp TTACCTGAGCAGAAGTTTCTCCCTCTTCCTGGTCACTaGTTGGCCTTTCCACAGGACTGTTCAATGCAGGTC +
Preference number: 6 (lower is better)
Translates to: LPEQKFLPLPGH*LAFPQDCSMQV
Trigger: GACCTGCATTGAACAGTCCTGTGGAAAGGCCAAGCAGTGACCAGGAAGAGGGAGAAACTTCTGCTCAGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566334.1
CDS GCA 72 bp GACCTTACCATTGCATTGAGCTGGGAGTTGCTGGCCTaGGTAATGCCAAGAATGTTGGTGGTGTGCATCACT +
Preference number: 6 (lower is better)
Translates to: DLTIALSWELLA*VMPRMLVVCIT
Trigger: AGTGATGCACACCACCAACATTCTTGGCATTACGCAGGCCAGCAACTCCCAGCTCAATGCAATGGTAAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568762.1
CDS CCA 72 bp CTGAGCAGAAGTTTCTCCCTCTTCCTGGTCACTGCTTaGCCTTTCCACAGGACTGTTCAATGCAGGTCTGAT +
Preference number: 6 (lower is better)
Translates to: LSRSFSLFLVTA*PFHRTVQCRSD
Trigger: ATCAGACCTGCATTGAACAGTCCTGTGGAAAGGCCAAGCAGTGACCAGGAAGAGGGAGAAACTTCTGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
ENST00000566334.1
ENST00000567738.1
CDS CCA 72 bp TCAGAACTTTTGTTCAAGAAACGTTTGCGAGCTTGCTaGAGGAGTTCGTCCTTACGCTGCACCAGCATGCGC +
Preference number: 6 (lower is better)
Translates to: SELLFKKRLRAC*RSSSLRCTSMR
Trigger: GCGCATGCTGGTGCAGCGTAAGGACGAACTCCTCCAGCAAGCTCGCAAACGTTTCTTGAACAAAAGTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
ENST00000568325.1
CDS TCA 72 bp CATACGTCCCCTTTCCTTCCCACGTCCCTTCGTGGTTaGGGTCCCAGAGGTGAATTACGTATCGTAAAATCA +
Preference number: 6 (lower is better)
Translates to: HTSPFLPTSLRG*GPRGELRIVKS
Trigger: TGATTTTACGATACGTAATTCACCTCTGGGACCTCAACCACGAAGGGACGTGGGAAGGAAAGGGGACGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
CDS TCA 72 bp TGCTTGGCCTTTCCACAGGACTGTTCAATGCAGGTCTaGTGCTATCTGACCGCTGGAAGAGAAACAGTACCA +
Preference number: 6 (lower is better)
Translates to: CLAFPQDCSMQV*CYLTAGRETVP
Trigger: TGGTACTGTTTCTCTTCCAGCGGTCAGATAGCATCAGACCTGCATTGAACAGTCCTGTGGAAAGGCCAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563285.1
CDS TCA 72 bp CGCATGGAGCTGTCATCTCCATCGAAATGGAAGAAGTaGTTGTGTTGGTTTAAGCGAGGTCTCCCTTCGGCT +
Preference number: 6 (lower is better)
Translates to: RMELSSPSKWKK*LCWFKRGLPSA
Trigger: AGCCGAAGGGAGACCTCGCTTAAACCAACACAATCACTTCTTCCATTTCGATGGAGATGACAGCTCCATGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567738.1
CDS CCA 72 bp TTAAAGCAGCTAGCAGACCTTACCATTGCATTGAGCTaGGAGTTGCTGGCCTGCGTAATGCCAAGAATGTTG +
Preference number: 6 (lower is better)
Translates to: LKQLADLTIALS*ELLACVMPRML
Trigger: CAACATTCTTGGCATTACGCAGGCCAGCAACTCCCAGCTCAATGCAATGGTAAGGTCTGCTAGCTGCTTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568762.1
CDS CAA 72 bp AGGAAGCTCTCTGAGGCCGCATCATCTTCAGAACTTTaGTTCAAGAAACGTTTGCGAGCTTGCTGGAGGAGT +
Preference number: 6 (lower is better)
Translates to: RKLSEAASSSEL*FKKRLRACWRS
Trigger: ACTCCTCCAGCAAGCTCGCAAACGTTTCTTGAACAAAAGTTCTGAAGATGATGCGGCCTCAGAGAGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000563285.1
ENST00000568325.1
CDS TCA 72 bp TTCCACAGGACTGTTCAATGCAGGTCTGATGCTATCTaGCCGCTGGAAGAGAAACAGTACCAAAAACAGTCC +
Preference number: 6 (lower is better)
Translates to: FHRTVQCRSDAI*PLEEKQYQKQS
Trigger: GGACTGTTTTTGGTACTGTTTCTCTTCCAGCGGTCAGATAGCATCAGACCTGCATTGAACAGTCCTGTGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563285.1
CDS GCA 72 bp TGGTGGGCGAGAAGGAAAGATATTCAAATCGATCCTTaGAGAGCTGAACCATCAGGTGCAGAAAGACAAGTC +
Preference number: 6 (lower is better)
Translates to: WWARRKDIQIDP*RAEPSGAERQV
Trigger: GACTTGTCTTTCTGCACCTGATGGTTCAGCTCTGCAAGGATCGATTTGAATATCTTTCCTTCTCGCCCACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
CDS CCA 72 bp CTCTCACTCACTCGAAGAGGGCCAAACACAATACACTaGATGAGCTTAGCCACCAACATCAAAACACAGCAA +
Preference number: 6 (lower is better)
Translates to: LSLTRRGPNTIH*MSLATNIKTQQ
Trigger: TTGCTGTGTTTTGATGTTGGTGGCTAAGCTCATCCAGTGTATTGTGTTTGGCCCTCTTCGAGTGAGTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
ENST00000568657.1
CDS CCA 72 bp ATATTGTCTGTTGTTATTTCAACTGAGCGTGTCAGCTaGAGGTCCTGCAGTACCAGATGGTATGGAACCTGG +
Preference number: 6 (lower is better)
Translates to: ILSVVISTERVS*RSCSTRWYGTW
Trigger: CCAGGTTCCATACCATCTGGTACTGCAGGACCTCCAGCTGACACGCTCAGTTGAAATAACAACAGACAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000566334.1
ENST00000567738.1
CDS CCA 72 bp GGACTGTTCAATGCAGGTCTGATGCTATCTGACCGCTaGAAGAGAAACAGTACCAAAAACAGTCCAGAGTCA +
Preference number: 6 (lower is better)
Translates to: GLFNAGLMLSDR*KRNSTKNSPES
Trigger: TGACTCTGGACTGTTTTTGGTACTGTTTCTCTTCCAGCGGTCAGATAGCATCAGACCTGCATTGAACAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563285.1
CDS CAA 72 bp CAGTACCAGATGGTATGGAACCTGGGGAAACATCTCTaGAATCTGATGAGCCATTGCATTGAGCTGGGAGTT +
Preference number: 6 (lower is better)
Translates to: QYQMVWNLGKHL*NLMSHCIELGV
Trigger: AACTCCCAGCTCAATGCAATGGCTCATCAGATTCAAGAGATGTTTCCCCAGGTTCCATACCATCTGGTACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000566334.1
ENST00000567738.1
CDS CAA 72 bp CCCTTCATTATTGGGATGGATACAGCACAGTTTCTTTaGTACTCGTGCCCTAAGCCTTGCAAGCTTCAGGAC +
Preference number: 6 (lower is better)
Translates to: PFIIGMDTAQFL*YSCPKPCKLQD
Trigger: GTCCTGAAGCTTGCAAGGCTTAGGGCACGAGTACAAAAGAAACTGTGCTGTATCCATCCCAATAATGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566334.1
CDS TCA 72 bp GAGAAGGAAAGATATTCAAATCGATCCTTGCAGAGCTaGACCATCAGGTGCAGAAAGACAAGTCCGGCAAAC +
Preference number: 6 (lower is better)
Translates to: EKERYSNRSLQS*TIRCRKTSPAN
Trigger: GTTTGCCGGACTTGTCTTTCTGCACCTGATGGTTCAGCTCTGCAAGGATCGATTTGAATATCTTTCCTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290649.10
ENST00000563664.1
ENST00000565445.5
CDS GCA 72 bp CTCTGCTTAGGGTTCTGTGATATTCAAATCGATCCTTaGAGAGCTGAACCATCAGGTGCAGAAAGACAAGTC +
Preference number: 6 (lower is better)
Translates to: LCLGFCDIQIDP*RAEPSGAERQV
Trigger: GACTTGTCTTTCTGCACCTGATGGTTCAGCTCTGCAAGGATCGATTTGAATATCACAGAACCCTAAGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568657.1
CDS CCA 72 bp TCTCTCAGTCATTTACAGCCCACTTTCAACCCCAAATaGGAACATGCAAGGAGACAAGATCCAAGAAGCCAT +
Preference number: 6 (lower is better)
Translates to: SLSHLQPTFNPK*EHARRQDPRSH
Trigger: ATGGCTTCTTGGATCTTGTCTCCTTGCATGTTCCCATTTGGGGTTGAAAGTGGGCTGTAAATGACTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564283.1
CDS TCA 72 bp CTGATGCTATCTGACCGCTGTGTAGGAAAAGGTACTTaGATCCGTCCTTCTAAAATATTGTCTGTTGTTATT +
Preference number: 6 (lower is better)
Translates to: LMLSDRCVGKGT*IRPSKILSVVI
Trigger: AATAACAACAGACAATATTTTAGAAGGACGGATTCAAGTACCTTTTCCTACACAGCGGTCAGATAGCATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000290649.10
ENST00000492830.5
ENST00000566334.1
ENST00000567738.1
CDS TCA 72 bp TCACTGCGGGATTTACATAAGTATTCAAGGCCAAGATaGAAGCAAAATTCTCTAGCCAAAATACCGTTGATC +
Preference number: 6 (lower is better)
Translates to: SLRDLHKYSRPR*KQNSLAKIPLI
Trigger: GATCAACGGTATTTTGGCTAGAGAATTTTGCTTTCATCTTGGCCTTGAATACTTATGTAAATCCCGCAGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564283.1
CDS TCA 72 bp AGGAGACAAGATCCAAGAAGCCATATTAAATCCAAGTaGGGCTTTAAATCCTGGAGAAACTTTTCTGATCAC +
Preference number: 6 (lower is better)
Translates to: RRQDPRSHIKSK*GFKSWRNFSDH
Trigger: GTGATCAGAAAAGTTTCTCCAGGATTTAAAGCCTCACTTGGATTTAATATGGCTTCTTGGATCTTGTCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000564283.1