RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AMDHD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000162066

Ensembl transcript IDs: ENST00000293971.11, ENST00000302956.8, ENST00000413459.7, ENST00000561487.1, ENST00000563145.1, ENST00000563444.1, ENST00000563453.1, ENST00000563556.1, ENST00000563633.5, ENST00000565963.5, ENST00000566706.5, ENST00000566947.5, ENST00000567475.5, ENST00000568263.5, ENST00000569219.1, ENST00000569879.5, ENST00000570028.5, ENST00000648227.1

Found 654 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCCCCGACCCTCCAGCCAGGGAGGTGGGGCGCTGGCCGGTGAATaGGGCAGGCCAGGCCCAAAGGCTGGCCCAGGGCTCACCAGCTCT +
Preference number: 1 (lower is better)
Translates to: PPRPSSQGGGALAGE*GRPGPKAGPGLTSS
Trigger: AGAGCTGGTGAGCCCTGGGCCAGCCTTTGGGCCTGGCCTGCCCCATTCACCGGCCAGCGCCCCACCTCCCTGGCTGGAGGGTCGGGGAGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 90 bp CCAGGCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTaGGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACC +
Preference number: 1 (lower is better)
Translates to: PGPAQAGAGQPLPKG*AAVKAEVGIPAPHT
Trigger: GGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
3UTR GCA 90 bp ACGGTGGGCGATCCGCAGGGCGGCGGGGTTGGTGTGCGTGCCATCTaGAATCATCCCATAGAAGATGCAGCGGCCTGCGGGCAGCCGGTC +
Preference number: 1 (lower is better)
Translates to: TVGDPQGGGVGVRAI*NHPIEDAAACGQPV
Trigger: GACCGGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGATGGCACGCACACCAACCCCGCCGCCCTGCGGATCGCCCACCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR CCA 90 bp GCACGTTTATCCCAGCCACCGCCTCCAGGGCGGCCGCACAGGCCCTaGGCATCAATCCAGCAGGGCTCCCGACTCACTCCCTGGAGACCA +
Preference number: 1 (lower is better)
Translates to: ARLSQPPPPGRPHRP*ASIQQGSRLTPWRP
Trigger: TGGTCTCCAGGGAGTGAGTCGGGAGCCCTGCTGGATTGATGCCCAGGGCCTGTGCGGCCGCCCTGGAGGCGGTGGCTGGGATAAACGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 90 bp CGGCGGGGTTGGTGTGCGTGCCATCTGCAATCATCCCATAGAAGATaGAGCGGCCTGCGGGCAGCCGGTCGCTGGTCAGGAGCCCCACGA +
Preference number: 1 (lower is better)
Translates to: RRGWCACHLQSSHRR*SGLRAAGRWSGAPR
Trigger: TCGTGGGGCTCCTGACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGATGGCACGCACACCAACCCCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR GCA 90 bp GATGGGCACGGTGGGCGATCCGCAGGGCGGCGGGGTTGGTGTGCGTaGCATCTGCAATCATCCCATAGAAGATGCAGCGGCCTGCGGGCA +
Preference number: 1 (lower is better)
Translates to: DGHGGRSAGRRGWCA*HLQSSHRRCSGLRA
Trigger: TGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGATGGCACGCACACCAACCCCGCCGCCCTGCGGATCGCCCACCGTGCCCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR GCA 90 bp GTGCCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCCTaGTGGGTGCACGTTTATCCCAGCCACCGCCTCCAGGGCGGCCGC +
Preference number: 1 (lower is better)
Translates to: VPHVSTSKTRSQGES*WVHVYPSHRLQGGR
Trigger: GCGGCCGCCCTGGAGGCGGTGGCTGGGATAAACGTGCACCCAGCAGGACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 90 bp GGTGTGCGTGCCATCTGCAATCATCCCATAGAAGATGCAGCGGCCTaGGGGCAGCCGGTCGCTGGTCAGGAGCCCCACGATGCCTGGGTC +
Preference number: 1 (lower is better)
Translates to: GVRAICNHPIEDAAA*GQPVAGQEPHDAWV
Trigger: GACCCAGGCATCGTGGGGCTCCTGACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGATGGCACGCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR CCA 90 bp TGCAGGTCTCCGGTCCACTTCATGCAGACAGGCCCTGTCCCCCACTaGGGCCCAAGGCCCAGGCTAAACTACAGCCCAGCCATCCCACCC +
Preference number: 1 (lower is better)
Translates to: CRSPVHFMQTGPVPH*GPRPRLNYSPAIPP
Trigger: GGGTGGGATGGCTGGGCTGTAGTTTAGCCTGGGCCTTGGGCCCCAGTGGGGGACAGGGCCTGTCTGCATGAAGTGGACCGGAGACCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 90 bp CTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTaGCCCTGGGGCTTGTGGGCTGAGATCAACCCCTTGTGCCCTGCC +
Preference number: 1 (lower is better)
Translates to: LSGGQDPHPSPAFLG*PWGLWAEINPLCPA
Trigger: GGCAGGGCACAAGGGGTTGATCTCAGCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
3UTR CCA 90 bp CCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCCTGCTaGGTGCACGTTTATCCCAGCCACCGCCTCCAGGGCGGCCGCACA +
Preference number: 1 (lower is better)
Translates to: PHVSTSKTRSQGESC*VHVYPSHRLQGGRT
Trigger: TGTGCGGCCGCCCTGGAGGCGGTGGCTGGGATAAACGTGCACCCAGCAGGACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 90 bp GATGACACTAATGGGGTGAGCAGGGCACACTGGTGCCTCCCATACTaGCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAAGCACTGG +
Preference number: 1 (lower is better)
Translates to: DDTNGVSRAHWCLPY*PPAPGRVTTAGKHW
Trigger: CCAGTGCTTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAGTGTGCCCTGCTCACCCCATTAGTGTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 90 bp GCTCAACCTCTAACACATCGGCTGAGAACCTCACCTGCCTCTCCCTaGCTGGGAGCCCTGGCAAGACAGCTCCTCTCCCAGGCCCAGCAC +
Preference number: 1 (lower is better)
Translates to: AQPLTHRLRTSPASP*LGALARQLLSQAQH
Trigger: GTGCTGGGCCTGGGAGAGGAGCTGTCTTGCCAGGGCTCCCAGGCAGGGAGAGGCAGGTGAGGTTCTCAGCCGATGTGTTAGAGGTTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 90 bp CTGTGGCCTGCAGGAAGTGCCGGACACAGACGTCCATTGGGGCTATaGTGCCACTCAGCGTCTTGGTGCCTGCCACGTAGGCCGTCAGAC +
Preference number: 1 (lower is better)
Translates to: LWPAGSAGHRRPLGL*CHSASWCLPRRPSD
Trigger: GTCTGACGGCCTACGTGGCAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR CCA 90 bp ATGCCTGGGTCGCGGTGGTGGAAAGGCAGCATGGCGTTGAAGAGGTaGGTGATGAAGGTGGCTCCGCTCCACACAGCATCCTCTGCCGCC +
Preference number: 1 (lower is better)
Translates to: MPGSRWWKGSMALKR*VMKVAPLHTASSAA
Trigger: GGCGGCAGAGGATGCTGTGTGGAGCGGAGCCACCTTCATCACCCACCTCTTCAACGCCATGCTGCCTTTCCACCACCGCGACCCAGGCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR CCA 90 bp CCAGCCACTGACTGCCTGCCCCTCCCTCCCATAGTGACACTTTCCTaGGGTCTGCAGGTCTCCGGTCCACTTCATGCAGACAGGCCCTGT +
Preference number: 1 (lower is better)
Translates to: PATDCLPLPPIVTLS*GLQVSGPLHADRPC
Trigger: ACAGGGCCTGTCTGCATGAAGTGGACCGGAGACCTGCAGACCCCAGGAAAGTGTCACTATGGGAGGGAGGGGCAGGCAGTCAGTGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CCA 90 bp CTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTaGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACA +
Preference number: 1 (lower is better)
Translates to: LDSHFLRGARPSRQR*VSLHLTPLRRSGST
Trigger: TGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
3UTR TCA 90 bp CAGGGCCAAGGGGACACAGAAGATGGCAGGATGACACTAATGGGGTaGGCAGGGCACACTGGTGCCTCCCATACTGCCCTCCAGCACCAG +
Preference number: 1 (lower is better)
Translates to: QGQGDTEDGRMTLMG*AGHTGASHTALQHQ
Trigger: CTGGTGCTGGAGGGCAGTATGGGAGGCACCAGTGTGCCCTGCTCACCCCATTAGTGTCATCCTGCCATCTTCTGTGTCCCCTTGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 90 bp AGAAGATGGCAGGATGACACTAATGGGGTGAGCAGGGCACACTGGTaGCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCC +
Preference number: 1 (lower is better)
Translates to: RRWQDDTNGVSRAHW*LPYCPPAPGRVTTA
Trigger: GGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAGTGTGCCCTGCTCACCCCATTAGTGTCATCCTGCCATCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CCA 90 bp CACAGAAGATGGCAGGATGACACTAATGGGGTGAGCAGGGCACACTaGTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACA +
Preference number: 1 (lower is better)
Translates to: HRRWQDDTNGVSRAH*CLPYCPPAPGRVTT
Trigger: TGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAGTGTGCCCTGCTCACCCCATTAGTGTCATCCTGCCATCTTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 90 bp AGCTGTTCAGGGAGCCTCACGGCCCGTGTTTGCCACATGGGTGTGTaGCAGGGCCAAGGGGACACAGAAGATGGCAGGATGACACTAATG +
Preference number: 1 (lower is better)
Translates to: SCSGSLTARVCHMGV*QGQGDTEDGRMTLM
Trigger: CATTAGTGTCATCCTGCCATCTTCTGTGTCCCCTTGGCCCTGGCACACACCCATGTGGCAAACACGGGCCGTGAGGCTCCCTGAACAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR TCA 90 bp CCGTCTGAGGTGGGGATGACCAACATGCCAGCTCTGGGTTTTAGCTaGGGATGGGCACATCAAGCACTGACAGCCAGCAAGCTGGGCACA +
Preference number: 1 (lower is better)
Translates to: PSEVGMTNMPALGFS*GWAHQALTASKLGT
Trigger: TGTGCCCAGCTTGCTGGCTGTCAGTGCTTGATGTGCCCATCCTCAGCTAAAACCCAGAGCTGGCATGTTGGTCATCCCCACCTCAGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CCA 90 bp CTGCCCAGGCAGGTGGTTCTTCCCTGGCTGTTCCCTTCCAACAGGTaGGGCCCAGACCATCCTATCTCTTTGGACCTGGAGACATTTCCT +
Preference number: 1 (lower is better)
Translates to: LPRQVVLPWLFPSNR*GPDHPISLDLETFP
Trigger: AGGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTCTGGGCCCCACCTGTTGGAAGGGAACAGCCAGGGAAGAACCACCTGCCTGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CCA 90 bp GCCCAGACCATCCTATCTCTTTGGACCTGGAGACATTTCCTTAACTaGGCTTTGCAGCAGAGGGAAGAGAACAGTGGCAGAGCCAGGCGC +
Preference number: 1 (lower is better)
Translates to: AQTILSLWTWRHFLN*ALQQREENSGRARR
Trigger: GCGCCTGGCTCTGCCACTGTTCTCTTCCCTCTGCTGCAAAGCCCAGTTAAGGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CCA 90 bp TCCCTTCCAACAGGTGGGGCCCAGACCATCCTATCTCTTTGGACCTaGAGACATTTCCTTAACTGGGCTTTGCAGCAGAGGGAAGAGAAC +
Preference number: 1 (lower is better)
Translates to: SLPTGGAQTILSLWT*RHFLNWALQQREEN
Trigger: GTTCTCTTCCCTCTGCTGCAAAGCCCAGTTAAGGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTCTGGGCCCCACCTGTTGGAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR TCA 90 bp CACCGCCTCCAGGGCGGCCGCACAGGCCCTGGGCATCAATCCAGCAGGGCTCCCCCAACCACCCGGCCCTaGTGGCATCCCGCTGCGGCC +
Preference number: 2 (lower is better)
Translates to: HRLQGGRTGPGHQSSRAPPTTRP*WHPAAA
Trigger: GGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGG...GGGAGCCCTGCTGGATTGATGCCCAGGGCCTGTGCGGCCGCCCTGGAGGCGGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR TCA 90 bp GGCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCCCAACCACCCGGCCCTaGTGGCATCCCGCTGCGGCC +
Preference number: 2 (lower is better)
Translates to: GPAQAGAGQPLPKGCAAVPTTRP*WHPAAA
Trigger: GGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGG...GACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR TCA 90 bp CAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGCCAACCACCCGGCCCTaGTGGCATCCCGCTGCGGCC +
Preference number: 2 (lower is better)
Translates to: QALDSHFLRGARPSRQRWPTTRP*WHPAAA
Trigger: GGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGG...CCACCTCTGCCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CCA 90 bp GACCGTCCACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCACCAGCACCAGCCCCTaGGGATGGGCACGGTGGGCG +
Preference number: 2 (lower is better)
Translates to: DRPLPLPAVPACAGRCPGTSTSP*GWARWA
Trigger: CGCCCACCGTGCCCATCCCCAGGGGCTGGTGCTGGT...GCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGGACGGTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR-3UTR TCA 90 bp CAGGGAGGTGGGGCGCTGGCCGGTGAATGGGGCAGGCCAGGCCCAAAGGCTGGCCCAATCCCTGACGTCTaGCCCCACTGTGGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: QGGGALAGEWGRPGPKAGPIPDV*PHCGCP
Trigger: AGGACAGCCACAGTGGGGTCAGACGTCAGGGATTGG...GCCAGCCTTTGGGCCTGGCCTGCCCCATTCACCGGCCAGCGCCCCACCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CCA 90 bp CAGGGAGGTGGGGCGCTGGCCGGTGAATGGGGCAGGCCAGGCCCAAAGGCTGGCTCCCGACTCACTCCCTaGAGACCAGCTCCCCAACCA +
Preference number: 2 (lower is better)
Translates to: QGGGALAGEWGRPGPKAGSRLTP*RPAPQP
Trigger: TGGTTGGGGAGCTGGTCTCCAGGGAGTGAGTCGGGA...GCCAGCCTTTGGGCCTGGCCTGCCCCATTCACCGGCCAGCGCCCCACCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CCA 90 bp ACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCAAGGCACGGGCAGCCGGTCGCTaGTCAGGAGCCCCACGATGC +
Preference number: 2 (lower is better)
Translates to: TSTSCCPSVCRPLPRPKARAAGR*SGAPRC
Trigger: GCATCGTGGGGCTCCTGACCAGCGACCGGCTGCCCG...TGCCTTGGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR-3UTR GCA 90 bp CCACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCAAGGCCACACAGCATCCTCTaGCGCCCGCAGGTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: PLPLPAVPACAGRCPGPRPHSIL*RPQVSH
Trigger: GTGGCTGACCTGCGGGCGGCAGAGGATGCTGTGTGG...CCTTGGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR-3UTR CCA 90 bp CCAAGAGGGCTCCAGAAGCCCACCCGCCTCGAAGCTGTTCAGGGAGCCTCACGGTCAGAGCGGAGCCCCTaGCACTGTGCCCTGGCCCAG +
Preference number: 2 (lower is better)
Translates to: PRGLQKPTRLEAVQGASRSERSP*HCALAQ
Trigger: CTGGGCCAGGGCACAGTGCCAGGGGCTCCGCTCTGA...CCGTGAGGCTCCCTGAACAGCTTCGAGGCGGGTGGGCTTCTGGAGCCCTCTTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CCA 90 bp CTGGTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAAGCCCAGTCTCCCTCCTaGAGGTCAGAGCGGAGCCCC +
Preference number: 2 (lower is better)
Translates to: LVPPILPSSTRQGHHSRQAQSPS*RSERSP
Trigger: GGGGCTCCGCTCTGACCTCCAGGAGGGAGACTGGGC...TTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CCA 90 bp CCACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCAAGGGAGCCCCACGATGCCTaGGTCGCGGTGGTGGAAAGG +
Preference number: 2 (lower is better)
Translates to: PLPLPAVPACAGRCPGPREPHDA*VAVVER
Trigger: CCTTTCCACCACCGCGACCCAGGCATCGTGGGGCTC...CCTTGGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR-3UTR GCA 90 bp CCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCCCTCAGGCGAGGCCCTaGCCAGGCAGGTGGTTCTTC +
Preference number: 2 (lower is better)
Translates to: PKGCAAVKAEVGIPAPHTPQARP*PGRWFF
Trigger: GAAGAACCACCTGCCTGGGCAGGGCCTCGCCTGAGG...GGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR GCA 90 bp CCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCGAGATCAACCCCTTGTaGCCTGCCCCAGGCCCTCCC +
Preference number: 2 (lower is better)
Translates to: PKGCAAVKAEVGIPAPHTEINPL*PAPGPP
Trigger: GGGAGGGCCTGGGGCAGGGCACAAGGGGTTGATCTC...GGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
3UTR-3UTR GCA 90 bp CCGTCCACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCGCGGCGGGGTTGGTGTaGGTGCCATCTGCAATCATC +
Preference number: 2 (lower is better)
Translates to: PSTSTSCCPSVCRPLPRPAAGLV*VPSAII
Trigger: GATGATTGCAGATGGCACGCACACCAACCCCGCCGC...GGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR-3UTR GCA 90 bp CATCTGCAATCATCCCATAGAAGATGCAGCGGCCTGCGGGCAGCCGGTCGCTGGCTAGGGACACGCAGATaGCACGGGCCGTCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: HLQSSHRRCSGLRAAGRWLGTRR*HGPSAP
Trigger: GGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAG...CCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR-3UTR GCA 90 bp CCGGACACAGACGTCCATTGGGGCTATGCTGCCACTCAGCGTCTTGGTGCCTGCGAAGATGCAGCGGCCTaGGGGCAGCCGGTCGCTGGT +
Preference number: 2 (lower is better)
Translates to: PDTDVHWGYAATQRLGACEDAAA*GQPVAG
Trigger: ACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTC...GCAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR-3UTR CCA 90 bp GTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAAGCAGGTGGCTTCACCCCATaGCACCAGCCACTGACTGCC +
Preference number: 2 (lower is better)
Translates to: VPPILPSSTRQGHHSRQAGGFTP*HQPLTA
Trigger: GGCAGTCAGTGGCTGGTGCCATGGGGTGAAGCCACC...TGCTTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR GCA 90 bp AAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCTGATGGCATCCCGCTaGGGCCAGGTGTCCTCTCAG +
Preference number: 2 (lower is better)
Translates to: KGCAAVKAEVGIPAPHTSLMASR*GQVSSQ
Trigger: CTGAGAGGACACCTGGCCGCAGCGGGATGCCATCAG...AGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR GCA 90 bp CTGGTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAAGCGAGTCCTGCTGGGTaGACGTTTATCCCAGCCACC +
Preference number: 2 (lower is better)
Translates to: LVPPILPSSTRQGHHSRQASPAG*TFIPAT
Trigger: GGTGGCTGGGATAAACGTGCACCCAGCAGGACTCGC...TTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR GCA 90 bp GACCGTCCACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCAGGTCAGCCACTGAGTaGCCTAGGGACACGCAGATG +
Preference number: 2 (lower is better)
Translates to: DRPLPLPAVPACAGRCPGRSATE*PRDTQM
Trigger: CATCTGCGTGTCCCTAGGGCACTCAGTGGCTGACCT...GCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGGACGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR-3UTR GCA 90 bp AGCCTGTGGCCTGCAGGAAGTGCCGGACACAGACGTCCATTGGGGCTATGCTGCTCAGGAGCCCCACGATaGCTGGGTCGCGGTGGTGGA +
Preference number: 2 (lower is better)
Translates to: SLWPAGSAGHRRPLGLCCSGAPR*LGRGGG
Trigger: TCCACCACCGCGACCCAGGCATCGTGGGGCTCCTGA...GCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCACAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR-3UTR TCA 90 bp TGGGGCCCAAGGCCCAGGCTAAACTACAGCCCAGCCATCCCACCCCAGGCCGTGGGATGGTGCCACATGTaGGCACAAGCAAAACCCGGA +
Preference number: 2 (lower is better)
Translates to: WGPRPRLNYSPAIPPQAVGWCHM*AQAKPG
Trigger: TCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCC...CACGGCCTGGGGTGGGATGGCTGGGCTGTAGTTTAGCCTGGGCCTTGGGCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR TCA 90 bp GTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCTCCCACCCCAGGCCGTaGATGCCTTCTCCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: VGIPAPHTSQEVRIHIRRSHPRP*MPSPGG
Trigger: CCCTCCTGGAGAAGGCATTCACGGCCTGGGGTGGGA...GCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR GCA 90 bp GGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGAGCCAAGGCGAGTCCTaGTGGGTGCACGTTTATCCC +
Preference number: 2 (lower is better)
Translates to: GGQDPHPSPAFLGCPWGLSQGES*WVHVYP
Trigger: GGGATAAACGTGCACCCAGCAGGACTCGCCTTGGCT...CAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR GCA 90 bp GCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTGCCACATGGGTGTGTGCTCCGGTCCACTTCATaGAGACAGGCCCTGTCCCCC +
Preference number: 2 (lower is better)
Translates to: ASKLFREPHGPCLPHGCVLRSTS*RQALSP
Trigger: GGGGGACAGGGCCTGTCTGCATGAAGTGGACCGGAG...CACACACCCATGTGGCAAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR GCA 90 bp AAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTTGCCACATGGGTGTGTaGCAGGGCCAAGGGGACACA +
Preference number: 2 (lower is better)
Translates to: KGCAAVKAEVGIPAPHTSCHMGV*QGQGDT
Trigger: TGTGTCCCCTTGGCCCTGGCACACACCCATGTGGCA...AGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CCA 90 bp CCACGCTGCACACCCCAACTCAGGAGCAGAAAGCAAACCCCTGACTGTCCACACCGGCCGCACAGGCCCTaGGCATCAATCCAGCAGGGC +
Preference number: 2 (lower is better)
Translates to: PRCTPQLRSRKQTPDCPHRPHRP*ASIQQG
Trigger: GCCCTGCTGGATTGATGCCCAGGGCCTGTGCGGCCG...GTGTGGACAGTCAGGGGTTTGCTTTCTGCTCCTGAGTTGGGGTGTGCAGCGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CCA 90 bp AAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTGAGGGAAGAGAACAGTaGCAGAGCCAGGCGCGTACC +
Preference number: 2 (lower is better)
Translates to: KGCAAVKAEVGIPAPHTSEGREQ*QSQART
Trigger: GGTACGCGCCTGGCTCTGCCACTGTTCTCTTCCCTC...AGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR GCA 90 bp GCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGCTGATGGCATCCCGCTaGGGCCAGGTGTCCTCTCAG +
Preference number: 2 (lower is better)
Translates to: APHTSQEVRIHIRRLLSWLMASR*GQVSSQ
Trigger: CTGAGAGGACACCTGGCCGCAGCGGGATGCCATCAG...CCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR GCA 90 bp GTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCTGGTGCCTCCCATACTaGCCTCCAGCACCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: VGIPAPHTSQEVRIHIRRWCLPY*PPAPGR
Trigger: CCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCA...GCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR GCA 90 bp CCGGACACAGACGTCCATTGGGGCTATGCTGCCACTCAGCGTCTTGGTGCCTGCTCCACTTCCACTTCCTaGTGTCCCAGCGTGTGCCGG +
Preference number: 2 (lower is better)
Translates to: PDTDVHWGYAATQRLGACSTSTS*CPSVCR
Trigger: CCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGGA...GCAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR-3UTR CCA 90 bp CTTCATGCAGACAGGCCCTGTCCCCCACTGGGGCCCAAGGCCCAGGCTAAACTATCCCGACTCACTCCCTaGAGACCAGCTCCCCAACCA +
Preference number: 2 (lower is better)
Translates to: LHADRPCPPLGPKAQAKLSRLTP*RPAPQP
Trigger: TGGTTGGGGAGCTGGTCTCCAGGGAGTGAGTCGGGA...TAGTTTAGCCTGGGCCTTGGGCCCCAGTGGGGGACAGGGCCTGTCTGCATGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR TCA 90 bp AGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACAGGCTGCACCAATCCCTaGCGTCTGACCCCACTGTGG +
Preference number: 2 (lower is better)
Translates to: RQRWVSLHLTPLRRSGSTGCTNP*RLTPLW
Trigger: CCACAGTGGGGTCAGACGTCAGGGATTGGTGCAGCC...TGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR GCA 90 bp AGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACACTGTGGGCTCCACGCTaGACACCCCAACTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: RQRWVSLHLTPLRRSGSTLWAPR*TPQLRS
Trigger: GCTCCTGAGTTGGGGTGTGCAGCGTGGAGCCCACAG...TGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CCA 90 bp AGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACAACCCCCAGCCCATGGTaGCTTCACCCCATGGCACCA +
Preference number: 2 (lower is better)
Translates to: RQRWVSLHLTPLRRSGSTTPSPW*LHPMAP
Trigger: TGGTGCCATGGGGTGAAGCCACCATGGGCTGGGGGT...TGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CCA 90 bp AAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGTGGTTCTTCCCTaGCTGTTCCCTTCCAACAGG +
Preference number: 2 (lower is better)
Translates to: KGCAAVKAEVGIPAPHTSQVVLP*LFPSNR
Trigger: CCTGTTGGAAGGGAACAGCCAGGGAAGAACCACCTG...AGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR TCA 90 bp CTGGGCGTCCCGTCTGAGGTGGGGATGACCAACATGCCAGCTCTGGGTTTTAGCCAAGACAATCACCCCTaGCGTGGGGCTGCACCAATC +
Preference number: 2 (lower is better)
Translates to: LGVPSEVGMTNMPALGFSQDNHP*RGAAPI
Trigger: GATTGGTGCAGCCCCACGTCAGGGGTGATTGTCTTG...GCTAAAACCCAGAGCTGGCATGTTGGTCATCCCCACCTCAGACGGGACGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CCA 90 bp AAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTATAGTGACACTTTCCTaGGGTCTGCAGGTCTCCGGT +
Preference number: 2 (lower is better)
Translates to: KGCAAVKAEVGIPAPHTSIVTLS*GLQVSG
Trigger: ACCGGAGACCTGCAGACCCCAGGAAAGTGTCACTAT...AGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR GCA 90 bp CCACGCTGCACACCCCAACTCAGGAGCAGAAAGCAAACCCCTGACTGTCCACACCACTTTCCTGGGGTCTaGAGGTCTCCGGTCCACTTC +
Preference number: 2 (lower is better)
Translates to: PRCTPQLRSRKQTPDCPHHFPGV*RSPVHF
Trigger: GAAGTGGACCGGAGACCTGCAGACCCCAGGAAAGTG...GTGTGGACAGTCAGGGGTTTGCTTTCTGCTCCTGAGTTGGGGTGTGCAGCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CCA 90 bp ATCTGCAATCATCCCATAGAAGATGCAGCGGCCTGCGGGCAGCCGGTCGCTGGTATGGCGTTGAAGAGGTaGGTGATGAAGGTGGCTCCG +
Preference number: 2 (lower is better)
Translates to: ICNHPIEDAAACGQPVAGMALKR*VMKVAP
Trigger: CGGAGCCACCTTCATCACCCACCTCTTCAACGCCAT...ACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR-3UTR CCA 90 bp ACAGCCAGCAAGCTGGGCACAGGCGATGCTCAACCTCTAACACATCGGCTGAGAAACGCTGGTCATCCGTaGCACTCAGGGCTAGGCAGT +
Preference number: 2 (lower is better)
Translates to: TASKLGTGDAQPLTHRLRNAGHP*HSGLGS
Trigger: ACTGCCTAGCCCTGAGTGCCACGGATGACCAGCGTT...TCTCAGCCGATGTGTTAGAGGTTGAGCATCGCCTGTGCCCAGCTTGCTGGCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR TCA 90 bp GGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAATCGGGCCTGGGGATGTGTaGAGAGATAGGGTTATTGAG +
Preference number: 2 (lower is better)
Translates to: GEGSHPPQNSNGEKVKTIGPGDV*RDRVIE
Trigger: CTCAATAACCCTATCTCTTCACACATCCCCAGGCCC...GATTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CCA 90 bp AGGGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAAAGGGGACACAGAAGATaGCAGGATGACACTAATGGG +
Preference number: 2 (lower is better)
Translates to: RGKGATHPRTQMERKSRQRGHRR*QDDTNG
Trigger: CCCATTAGTGTCATCCTGCCATCTTCTGTGTCCCCT...TTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CCA 90 bp ACAGCCAGCAAGCTGGGCACAGGCGATGCTCAACCTCTAACACATCGGCTGAGACTATCTCTTTGGACCTaGAGACATTTCCTTAACTGG +
Preference number: 2 (lower is better)
Translates to: TASKLGTGDAQPLTHRLRLSLWT*RHFLNW
Trigger: CCAGTTAAGGAAATGTCTCCAGGTCCAAAGAGATAG...TCTCAGCCGATGTGTTAGAGGTTGAGCATCGCCTGTGCCCAGCTTGCTGGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CCA 72 bp CCCTCCAGCCAGGGAGGTGGGGCGCTGGCCGGTGAATaGGGCAGGCCAGGCCCAAAGGCTGGCCCAGGGCTC +
Preference number: 3 (lower is better)
Translates to: PSSQGGGALAGE*GRPGPKAGPGL
Trigger: GAGCCCTGGGCCAGCCTTTGGGCCTGGCCTGCCCCATTCACCGGCCAGCGCCCCACCTCCCTGGCTGGAGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CCA 72 bp TCCCAGCCACCGCCTCCAGGGCGGCCGCACAGGCCCTaGGCATCAATCCAGCAGGGCTCCCGACTCACTCCC +
Preference number: 3 (lower is better)
Translates to: SQPPPPGRPHRP*ASIQQGSRLTP
Trigger: GGGAGTGAGTCGGGAGCCCTGCTGGATTGATGCCCAGGGCCTGTGCGGCCGCCCTGGAGGCGGTGGCTGGGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CAA 90 bp CAGGGAGGTGGGGCGCTGGCCGGTGAATGGGGCAGGCCAGGCCCAAAGGCTGGCGCTGAGATCAACCCCTaGTGCCCTGCCCCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: QGGGALAGEWGRPGPKAGAEINP*CPAPGP
Trigger: AGGGCCTGGGGCAGGGCACAAGGGGTTGATCTCAGC...GCCAGCCTTTGGGCCTGGCCTGCCCCATTCACCGGCCAGCGCCCCACCTCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR TCA 72 bp CACTCCCTGGAGACCAGCTCCCCAACCACCCGGCCCTaGTGGCATCCCGCTGCGGCCAGGTGTCCTCTCAGC +
Preference number: 3 (lower is better)
Translates to: HSLETSSPTTRP*WHPAAARCPLS
Trigger: GCTGAGAGGACACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGCTGGTCTCCAGGGAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR-3UTR CAA 90 bp CCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCGGCTGCCCCTGGGGCTaGTGGGCTGAGATCAACCCC +
Preference number: 3 (lower is better)
Translates to: PKGCAAVKAEVGIPAPHTGCPWG*WAEINP
Trigger: GGGGTTGATCTCAGCCCACAAGCCCCAGGGGCAGCC...GGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
3UTR-3UTR CAA 90 bp TGCCTGCCACGTAGGCCGTCAGACCGTCCACTTCCACTTCCTGCTGTCCCAGCGCGCAGGGCGGCGGGGTaGGTGTGCGTGCCATCTGCA +
Preference number: 3 (lower is better)
Translates to: CLPRRPSDRPLPLPAVPARRAAG*VCVPSA
Trigger: TGCAGATGGCACGCACACCAACCCCGCCGCCCTGCG...CGCTGGGACAGCAGGAAGTGGAAGTGGACGGTCTGACGGCCTACGTGGCAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR GCA 72 bp GCAGGTCAGCCACTGAGTGCCCTAGGGACACGCAGATaGCACGGGCCGTCAGCGCCCGGATCACTTCGTGGC +
Preference number: 3 (lower is better)
Translates to: AGQPLSALGTRR*HGPSAPGSLRG
Trigger: GCCACGAAGTGATCCGGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAGGGCACTCAGTGGCTGACCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR CCA 72 bp GGGCAGCCGGTCGCTGGTCAGGAGCCCCACGATGCCTaGGTCGCGGTGGTGGAAAGGCAGCATGGCGTTGAA +
Preference number: 3 (lower is better)
Translates to: GQPVAGQEPHDA*VAVVERQHGVE
Trigger: TTCAACGCCATGCTGCCTTTCCACCACCGCGACCCAGGCATCGTGGGGCTCCTGACCAGCGACCGGCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR GCA 72 bp CAAGCAAAACCCGGAGCCAAGGCGAGTCCTGCTGGGTaGACGTTTATCCCAGCCACCGCCTCCAGGGCGGCC +
Preference number: 3 (lower is better)
Translates to: QAKPGAKASPAG*TFIPATASRAA
Trigger: GGCCGCCCTGGAGGCGGTGGCTGGGATAAACGTGCACCCAGCAGGACTCGCCTTGGCTCCGGGTTTTGCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 72 bp AATGGGGTGAGCAGGGCACACTGGTGCCTCCCATACTaGCCTCCAGCACCAGGCAGGGTCACCACAGCCGGC +
Preference number: 3 (lower is better)
Translates to: NGVSRAHWCLPY*PPAPGRVTTAG
Trigger: GCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAGTGTGCCCTGCTCACCCCATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 72 bp GCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTaGGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCA +
Preference number: 3 (lower is better)
Translates to: AQAGAGQPLPKG*AAVKAEVGIPA
Trigger: TGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
3UTR CCA 72 bp CCGGTCCACTTCATGCAGACAGGCCCTGTCCCCCACTaGGGCCCAAGGCCCAGGCTAAACTACAGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: PVHFMQTGPVPH*GPRPRLNYSPA
Trigger: GGCTGGGCTGTAGTTTAGCCTGGGCCTTGGGCCCCAGTGGGGGACAGGGCCTGTCTGCATGAAGTGGACCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR TCA 72 bp CCCAGGGCTCACCAGCTCTGGACTGGGCGTCCCGTCTaGGGTGGGGATGACCAACATGCCAGCTCTGGGTTT +
Preference number: 3 (lower is better)
Translates to: PRAHQLWTGRPV*GGDDQHASSGF
Trigger: AAACCCAGAGCTGGCATGTTGGTCATCCCCACCTCAGACGGGACGCCCAGTCCAGAGCTGGTGAGCCCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 72 bp CTGACTGTCCACACTCCCTGTGACTGGTCCCCTTCCTaGCGGCTCTTCACCCCCAGCCCATGGTGGCTTCAC +
Preference number: 3 (lower is better)
Translates to: LTVHTPCDWSPS*RLFTPSPWWLH
Trigger: GTGAAGCCACCATGGGCTGGGGGTGAAGAGCCGGCAGGAAGGGGACCAGTCACAGGGAGTGTGGACAGTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 72 bp GGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTaGCCCTGGGGCTTGTGGGCTGAGATCAACCCCTTG +
Preference number: 3 (lower is better)
Translates to: GQDPHPSPAFLG*PWGLWAEINPL
Trigger: CAAGGGGTTGATCTCAGCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
3UTR GCA 72 bp GGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTaGACCTCACACCTCTCAGGAGGTCAGGATCCACAT +
Preference number: 3 (lower is better)
Translates to: GVRGRQGRGGYP*TSHLSGGQDPH
Trigger: ATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
3UTR GCA 72 bp GCCATCTGCAATCATCCCATAGAAGATGCAGCGGCCTaGGGGCAGCCGGTCGCTGGTCAGGAGCCCCACGAT +
Preference number: 3 (lower is better)
Translates to: AICNHPIEDAAA*GQPVAGQEPHD
Trigger: ATCGTGGGGCTCCTGACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR GCA 72 bp GGAAGTGCCGGACACAGACGTCCATTGGGGCTATGCTaGCACTCAGCGTCTTGGTGCCTGCCACGTAGGCCG +
Preference number: 3 (lower is better)
Translates to: GSAGHRRPLGLC*HSASWCLPRRP
Trigger: CGGCCTACGTGGCAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR CCA 72 bp AGCACAAGCAAAACCCGGAGCCAAGGCGAGTCCTGCTaGGTGCACGTTTATCCCAGCCACCGCCTCCAGGGC +
Preference number: 3 (lower is better)
Translates to: STSKTRSQGESC*VHVYPSHRLQG
Trigger: GCCCTGGAGGCGGTGGCTGGGATAAACGTGCACCCAGCAGGACTCGCCTTGGCTCCGGGTTTTGCTTGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CCA 72 bp CAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTaGGCTGCCCCTGGGGCTTGTGGGCTGAGATCAACC +
Preference number: 3 (lower is better)
Translates to: QEVRIHIRRLLS*AAPGACGLRST
Trigger: GGTTGATCTCAGCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
3UTR GCA 72 bp GTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCCTaGTGGGTGCACGTTTATCCCAGCCACCGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: VSTSKTRSQGES*WVHVYPSHRLQ
Trigger: CTGGAGGCGGTGGCTGGGATAAACGTGCACCCAGCAGGACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 72 bp CCATGGTGGCTTCACCCCATGGCACCAGCCACTGACTaGCTGCCCCTCCCTCCCATAGTGACACTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: PWWLHPMAPATD*LPLPPIVTLSW
Trigger: CCAGGAAAGTGTCACTATGGGAGGGAGGGGCAGGCAGTCAGTGGCTGGTGCCATGGGGTGAAGCCACCATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 72 bp CAGGATGACACTAATGGGGTGAGCAGGGCACACTGGTaGCTCCCATACTGCCCTCCAGCACCAGGCAGGGTC +
Preference number: 3 (lower is better)
Translates to: QDDTNGVSRAHW*LPYCPPAPGRV
Trigger: GACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAGTGTGCCCTGCTCACCCCATTAGTGTCATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR GCA 72 bp GCAGGAAGTGCCGGACACAGACGTCCATTGGGGCTATaGTGCCACTCAGCGTCTTGGTGCCTGCCACGTAGG +
Preference number: 3 (lower is better)
Translates to: AGSAGHRRPLGL*CHSASWCLPRR
Trigger: CCTACGTGGCAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR CCA 72 bp CACTTCCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTaGGTATCCCTGCACCTCACACCTCTCAGGAGGTCA +
Preference number: 3 (lower is better)
Translates to: HFLRGARPSRQR*VSLHLTPLRRS
Trigger: TGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGGAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
3UTR-3UTR CAA 90 bp ACAGCCAGCAAGCTGGGCACAGGCGATGCTCAACCTCTAACACATCGGCTGAGAGCTGAGATCAACCCCTaGTGCCCTGCCCCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: TASKLGTGDAQPLTHRLRAEINP*CPAPGP
Trigger: AGGGCCTGGGGCAGGGCACAAGGGGTTGATCTCAGC...TCTCAGCCGATGTGTTAGAGGTTGAGCATCGCCTGTGCCCAGCTTGCTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CCA 72 bp GACTGCCTGCCCCTCCCTCCCATAGTGACACTTTCCTaGGGTCTGCAGGTCTCCGGTCCACTTCATGCAGAC +
Preference number: 3 (lower is better)
Translates to: DCLPLPPIVTLS*GLQVSGPLHAD
Trigger: GTCTGCATGAAGTGGACCGGAGACCTGCAGACCCCAGGAAAGTGTCACTATGGGAGGGAGGGGCAGGCAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CCA 72 bp TCGCGGTGGTGGAAAGGCAGCATGGCGTTGAAGAGGTaGGTGATGAAGGTGGCTCCGCTCCACACAGCATCC +
Preference number: 3 (lower is better)
Translates to: SRWWKGSMALKR*VMKVAPLHTAS
Trigger: GGATGCTGTGTGGAGCGGAGCCACCTTCATCACCCACCTCTTCAACGCCATGCTGCCTTTCCACCACCGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR-3UTR CAA 90 bp CATCTGCAATCATCCCATAGAAGATGCAGCGGCCTGCGGGCAGCCGGTCGCTGGAAAGGCAGCATGGCGTaGAAGAGGTGGGTGATGAAG +
Preference number: 3 (lower is better)
Translates to: HLQSSHRRCSGLRAAGRWKGSMA*KRWVMK
Trigger: CTTCATCACCCACCTCTTCAACGCCATGCTGCCTTT...CCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
3UTR TCA 72 bp CTTCTCCAGGAGGGCAACCAAGGATGGTGCCACATGTaGGCACAAGCAAAACCCGGAGCCAAGGCGAGTCCT +
Preference number: 3 (lower is better)
Translates to: LLQEGNQGWCHM*AQAKPGAKASP
Trigger: AGGACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCCTTGGTTGCCCTCCTGGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR TCA 72 bp CTCTGGGTTTTAGCTGAGGATGGGCACATCAAGCACTaGCAGCCAGCAAGCTGGGCACAGGCGATGCTCAAC +
Preference number: 3 (lower is better)
Translates to: LWVLAEDGHIKH*QPASWAQAMLN
Trigger: GTTGAGCATCGCCTGTGCCCAGCTTGCTGGCTGTCAGTGCTTGATGTGCCCATCCTCAGCTAAAACCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR TCA 72 bp GTGGGGATGACCAACATGCCAGCTCTGGGTTTTAGCTaGGGATGGGCACATCAAGCACTGACAGCCAGCAAG +
Preference number: 3 (lower is better)
Translates to: VGMTNMPALGFS*GWAHQALTASK
Trigger: CTTGCTGGCTGTCAGTGCTTGATGTGCCCATCCTCAGCTAAAACCCAGAGCTGGCATGTTGGTCATCCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CCA 72 bp ACAGGTGGGGCCCAGACCATCCTATCTCTTTGGACCTaGAGACATTTCCTTAACTGGGCTTTGCAGCAGAGG +
Preference number: 3 (lower is better)
Translates to: TGGAQTILSLWT*RHFLNWALQQR
Trigger: CCTCTGCTGCAAAGCCCAGTTAAGGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTCTGGGCCCCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CCA 72 bp CTTCCAACAGGTGGGGCCCAGACCATCCTATCTCTTTaGACCTGGAGACATTTCCTTAACTGGGCTTTGCAG +
Preference number: 3 (lower is better)
Translates to: LPTGGAQTILSL*TWRHFLNWALQ
Trigger: CTGCAAAGCCCAGTTAAGGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTCTGGGCCCCACCTGTTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CCA 72 bp GTTATTGAGAAGAGAAAACAGAACGCTGGTCATCCGTaGCACTCAGGGCTAGGCAGTCCAGGGAGCAGAAAA +
Preference number: 3 (lower is better)
Translates to: VIEKRKQNAGHP*HSGLGSPGSRK
Trigger: TTTTCTGCTCCCTGGACTGCCTAGCCCTGAGTGCCACGGATGACCAGCGTTCTGTTTTCTCTTCTCAATAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CACCGCCTCCAGGGCGGCCGCACAGGCCCTGGGCATCAATCCAGCAGGGCTCCCTGCTGTCCCAGCGTGTaGCGGCCGTTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: HRLQGGRTGPGHQSSRAPCCPSV*RPLPRP
Trigger: GGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCA...GGGAGCCCTGCTGGATTGATGCCCAGGGCCTGTGCGGCCGCCCTGGAGGCGGTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GGAGACCAGCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGAAGGGGCCCTCCAGGTaGAGCCCGAGGACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: GDQLPNHPALMASRCGQVKGPSR*SPRTPA
Trigger: GGCAGGGGTCCTCGGGCTGCACCTGGAGGGCCCCTT...CACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGCTGGTCTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGTCCTCTCATCGAAGGAGCGGAGGTaGGCCTCGGGGTGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: APQPPGPDGIPLRPGVLSSKERR*ASGCAP
Trigger: GGGCGCGCACCCCGAGGCCCACCTCCGCTCCTTCGA...TGAGAGGACACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCCGGGCAGCCGGTCGCTaGTCAGGAGCCCCACGATGC +
Preference number: 4 (lower is better)
Translates to: GPAQAGAGQPLPKGCAAVRAAGR*SGAPRC
Trigger: GCATCGTGGGGCTCCTGACCAGCGACCGGCTGCCCG...GACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCATGCTGTCCCAGCGTGTaGCGGCCGTTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: AQHRQALDSHFLRGARPSCCPSV*RPLPRP
Trigger: GGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCA...TGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CACCGCCTCCAGGGCGGCCGCACAGGCCCTGGGCATCAATCCAGCAGGGCTCCCGAGATCAACCCCTTGTaGCCTGCCCCAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: HRLQGGRTGPGHQSSRAPEINPL*PAPGPP
Trigger: GGGAGGGCCTGGGGCAGGGCACAAGGGGTTGATCTC...GGGAGCCCTGCTGGATTGATGCCCAGGGCCTGTGCGGCCGCCCTGGAGGCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCAAGGCAGGGATGGACCAGCACCAGCCCCTaGGGATGGGCACGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: LPAVPACAGRCPGPRQGWTSTSP*GWARWA
Trigger: CGCCCACCGTGCCCATCCCCAGGGGCTGGTGCTGGT...CCATCCCTGCCTTGGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp CACCGCCTCCAGGGCGGCCGCACAGGCCCTGGGCATCAATCCAGCAGGGCTCCCCCCAGAACCAGGCTGTaGGCTCCACGCTGCACACCC +
Preference number: 4 (lower is better)
Translates to: HRLQGGRTGPGHQSSRAPPRTRL*APRCTP
Trigger: GGGTGTGCAGCGTGGAGCCCACAGCCTGGTTCTGGG...GGGAGCCCTGCTGGATTGATGCCCAGGGCCTGTGCGGCCGCCCTGGAGGCGGTG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp CTGGTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAACCAACCACCCGGCCCTaGTGGCATCCCGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: LVPPILPSSTRQGHHSRQPTTRP*WHPAAA
Trigger: GGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGG...TTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp GGAGACCAGCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGTCCCACCCCAGGCCGTaGATGCCTTCTCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GDQLPNHPALMASRCGQVSHPRP*MPSPGG
Trigger: CCCTCCTGGAGAAGGCATTCACGGCCTGGGGTGGGA...CACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGCTGGTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GGAGACCAGCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGAAGGAGGTGACGCCGTaGGACAGGATCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GDQLPNHPALMASRCGQVKEVTP*DRILRA
Trigger: GGCCCGGAGGATCCTGTCGCACGGCGTCACCTCCTT...CACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGCTGGTCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGAAGGGGCCCTCCAGGTaGAGCCCGAGGACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QALDSHFLRGARPSRQRWKGPSR*SPRTPA
Trigger: GGCAGGGGTCCTCGGGCTGCACCTGGAGGGCCCCTT...CCACCTCTGCCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCCCAGGGCCGACTCCATaGTGCAGCCTGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GPAQAGAGQPLPKGCAAVPGPTP*CSLWPA
Trigger: TGCAGGCCACAGGCTGCAGCATGGAGTCGGCCCTGG...GACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGGGCGGGGTGCAGGGATaGAGCCTCCAGGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRGGVQG*SLQGRL
Trigger: GAGTCGGCCCTGGAGGCTGCATCCCTGCACCCCGCC...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CCACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCAAGGGGCGGGGTGCAGGGATaGAGCCTCCAGGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: PLPLPAVPACAGRCPGPRGGVQG*SLQGRL
Trigger: GAGTCGGCCCTGGAGGCTGCATCCCTGCACCCCGCC...CCTTGGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp GGCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAGCAACTGGGCGGGGTaGAGGGATGCAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GPAQAGAGQPLPKGCAAVSNWAG*RDAASR
Trigger: CCTGGAGGCTGCATCCCTGCACCCCGCCCAGTTGCT...GACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGTCGAAGGAGCGGAGGTaGGCCTCGGGGTGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: GQDPHPSPAFLGCPWGLWSKERR*ASGCAP
Trigger: GGGCGCGCACCCCGAGGCCCACCTCCGCTCCTTCGA...CCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp ACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCAAGGCATCGAAGGAGCGGAGGTaGGCCTCGGGGTGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: TSTSCCPSVCRPLPRPKASKERR*ASGCAP
Trigger: GGGCGCGCACCCCGAGGCCCACCTCCGCTCCTTCGA...TGCCTTGGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp CCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGCGGGCAGCCGGTCGCTaGTCAGGAGCCCCACGATGC +
Preference number: 4 (lower is better)
Translates to: PAQAGAGQPLPKGCAAVKRAAGR*SGAPRC
Trigger: GCATCGTGGGGCTCCTGACCAGCGACCGGCTGCCCG...CTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTGGGGATGGGCACGGTaGGCGATCCGCAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: ARPSRQRWVSLHLTPLRRWGWAR*AIRRAA
Trigger: CGCCGCCCTGCGGATCGCCCACCGTGCCCATCCCCA...CCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp ACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCAAGGCATGGGGATGGGCACGGTaGGCGATCCGCAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: TSTSCCPSVCRPLPRPKAWGWAR*AIRRAA
Trigger: CGCCGCCCTGCGGATCGCCCACCGTGCCCATCCCCA...TGCCTTGGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR TCA 90 bp GCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGTCCTCTCATGGGGCAGAAGGAGGTaGCGCCGTGCGACAGGATCC +
Preference number: 4 (lower is better)
Translates to: APQPPGPDGIPLRPGVLSWGRRR*RRATGS
Trigger: GGATCCTGTCGCACGGCGTCACCTCCTTCTGCCCCA...TGAGAGGACACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp GCAGAGGGAAGAGAACAGTGGCAGAGCCAGGCGCGTACCTCCTGTGCCCAGGACCCAACCACCCGGCCCTaGTGGCATCCCGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: AEGREQWQSQARTSCAQDPTTRP*WHPAAA
Trigger: GGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGG...GTCCTGGGCACAGGAGGTACGCGCCTGGCTCTGCCACTGTTCTCTTCCCTCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp CACCGCCTCCAGGGCGGCCGCACAGGCCCTGGGCATCAATCCAGCAGGGCTCCCCCAATCCCTGACGTCTaGCCCCACTGTGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: HRLQGGRTGPGHQSSRAPPIPDV*PHCGCP
Trigger: AGGACAGCCACAGTGGGGTCAGACGTCAGGGATTGG...GGGAGCCCTGCTGGATTGATGCCCAGGGCCTGTGCGGCCGCCCTGGAGGCGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CGGGCCGTCAGCGCCCGGATCACTTCGTGGCTACGGCCCAACTCTGGGGCCAGCTCTCTGGGTCCAAGATaGGGCCTCCGCGCACCCACA +
Preference number: 4 (lower is better)
Translates to: RAVSARITSWLRPNSGASSLGPR*GLRAPT
Trigger: TGTGGGTGCGCGGAGGCCGCATCTTGGACCCAGAGA...GCTGGCCCCAGAGTTGGGCCGTAGCCACGAAGTGATCCGGGCGCTGACGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp CCAAGAGGGCTCCAGAAGCCCACCCGCCTCGAAGCTGTTCAGGGAGCCTCACGGATCCGGGAGCCAAGATaGGGCCCCCGCAGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: PRGLQKPTRLEAVQGASRIREPR*GPRSPA
Trigger: GGCGGGACTGCGGGGGCCGCATCTTGGCTCCCGGAT...CCGTGAGGCTCCCTGAACAGCTTCGAGGCGGGTGGGCTTCTGGAGCCCTCTTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CGGTCCACTTCATGCAGACAGGCCCTGTCCCCCACTGGGGCCCAAGGCCCAGGCAAGGAGGTGACGCCGTaGGACAGGATCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RSTSCRQALSPTGAQGPGKEVTP*DRILRA
Trigger: GGCCCGGAGGATCCTGTCGCACGGCGTCACCTCCTT...GCCTGGGCCTTGGGCCCCAGTGGGGGACAGGGCCTGTCTGCATGAAGTGGACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCAAGGCAGGGATGGGGGCCAGCGTCACGATaGGGACATTGTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LPAVPACAGRCPGPRQGWGPASR*GHCPGA
Trigger: GGCCCCTGGACAATGTCCGCATCGTGACGCTGGCCC...CCATCCCTGCCTTGGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp ACGCAGATGCCACGGGCCGTCAGCGCCCGGATCACTTCGTGGCTACGGCCCAACCTAGGGACACGCAGATaGCACGGGCCGTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: TQMPRAVSARITSWLRPNLGTRR*HGPSAP
Trigger: GGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAG...GTTGGGCCGTAGCCACGAAGTGATCCGGGCGCTGACGGCCCGTGGCATCTGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp CCGTCCACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCCCACACAGCATCCTCTaGCGCCCGCAGGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: PSTSTSCCPSVCRPLPRPPHSIL*RPQVSH
Trigger: GTGGCTGACCTGCGGGCGGCAGAGGATGCTGTGTGG...GGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGGACGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp GCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGGCGTGTGCCGGCCGTTaGCCAGGCCCAAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ARPSRQRWVSLHLTPLRRACAGR*PGPRQG
Trigger: TCCCTGCCTTGGGCCTGGGCAACGGCCGGCACACGC...CCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTGCTGTCCCAGCGTGTaGCGGCCGTTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: PKGCAAVKAEVGIPAPHTCCPSV*RPLPRP
Trigger: GGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCA...GGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GCATCCTCTGCCGCCCGCAGGTCAGCCACTGAGTGCCCTAGGGACACGCAGATGTGCTGTCCCAGCGTGTaGCGGCCGTTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: ASSAARRSATECPRDTQMCCPSV*RPLPRP
Trigger: GGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCA...CATCTGCGTGTCCCTAGGGCACTCAGTGGCTGACCTGCGGGCGGCAGAGGATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp CGGTCCACTTCATGCAGACAGGCCCTGTCCCCCACTGGGGCCCAAGGCCCAGGCAGCAACTGGGCGGGGTaGAGGGATGCAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RSTSCRQALSPTGAQGPGSNWAG*RDAASR
Trigger: CCTGGAGGCTGCATCCCTGCACCCCGCCCAGTTGCT...GCCTGGGCCTTGGGCCCCAGTGGGGGACAGGGCCTGTCTGCATGAAGTGGACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGTCCTCTCACTAGCTGCGTCCGCCTaGCACACCAGCTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: APQPPGPDGIPLRPGVLSLAASA*HTSSPE
Trigger: CTCGGGTGAGCTGGTGTGGCAGGCGGACGCAGCTAG...TGAGAGGACACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CAGGGAGGTGGGGCGCTGGCCGGTGAATGGGGCAGGCCAGGCCCAAAGGCTGGCTGCCACATGGGTGTGTaGCAGGGCCAAGGGGACACA +
Preference number: 4 (lower is better)
Translates to: QGGGALAGEWGRPGPKAGCHMGV*QGQGDT
Trigger: TGTGTCCCCTTGGCCCTGGCACACACCCATGTGGCA...GCCAGCCTTTGGGCCTGGCCTGCCCCATTCACCGGCCAGCGCCCCACCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCACCTCAGGCGAGGCCCTaGCCAGGCAGGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: AQHRQALDSHFLRGARPSPQARP*PGRWFF
Trigger: GAAGAACCACCTGCCTGGGCAGGGCCTCGCCTGAGG...TGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCCCACTTCCTAAGGGGTaGGCGGCCGTCAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GPAQAGAGQPLPKGCAAVPLPKG*AAVKAE
Trigger: CTCTGCCTTGACGGCCGCGCACCCCTTAGGAAGTGG...GACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GACCGTCCACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCGGCAGTTAGTGAACTaGAGCACGCGGGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: DRPLPLPAVPACAGRCPGRQLVN*STRAPA
Trigger: GGCGGGGGCCCGCGTGCTCCAGTTCACTAACTGCCG...GCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGGACGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp TCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGTCGAAGGAGCGGAGGTaGGCCTCGGGGTGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: SQEVRIHIRRLLSWAAPGSKERR*ASGCAP
Trigger: GGGCGCGCACCCCGAGGCCCACCTCCGCTCCTTCGA...CCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GCCACTGAGTGCCCTAGGGACACGCAGATGCCACGGGCCGTCAGCGCCCGGATCCCAGGGGCCCGTAGGTaGCCAGCAAGTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ATECPRDTQMPRAVSARIPGARR*PASPGR
Trigger: CCTTCCAGGACTTGCTGGCCACCTACGGGCCCCTGG...GATCCGGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAGGGCACTCAGTGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp GCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAGCTACGGCCCAACTCTaGGGCCAGCGTCACGATGCG +
Preference number: 4 (lower is better)
Translates to: AQHRQALDSHFLRGARPSATAQL*GQRHDA
Trigger: CGCATCGTGACGCTGGCCCCAGAGTTGGGCCGTAGC...TGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CTGGTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAACGGGCAGCCGGTCGCTaGTCAGGAGCCCCACGATGC +
Preference number: 4 (lower is better)
Translates to: LVPPILPSSTRQGHHSRQRAAGR*SGAPRC
Trigger: GCATCGTGGGGCTCCTGACCAGCGACCGGCTGCCCG...TTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGACCAGCACCAGCCCCTaGGGATGGGCACGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: GGQDPHPSPAFLGCPWGLTSTSP*GWARWA
Trigger: CGCCCACCGTGCCCATCCCCAGGGGCTGGTGCTGGT...CAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCGGGTCGTGGGCCACCTaGCATGCGGGCTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: PKGCAAVKAEVGIPAPHTGSWAT*HAGWDL
Trigger: CAGGTCCCAGCCCGCATGCCAGGTGGCCCACGACCC...GGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGTCAGAGCGGAGCCCCTaGCACTGTGCCCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRSERSP*HCALAQ
Trigger: CTGGGCCAGGGCACAGTGCCAGGGGCTCCGCTCTGA...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CAGGGAGGTGGGGCGCTGGCCGGTGAATGGGGCAGGCCAGGCCCAAAGGCTGGCGAGGGAAGAGAACAGTaGCAGAGCCAGGCGCGTACC +
Preference number: 4 (lower is better)
Translates to: QGGGALAGEWGRPGPKAGEGREQ*QSQART
Trigger: GGTACGCGCCTGGCTCTGCCACTGTTCTCTTCCCTC...GCCAGCCTTTGGGCCTGGCCTGCCCCATTCACCGGCCAGCGCCCCACCTCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGGCGCTGGCCGGTGAATaGGGCAGGCCAGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRALAGE*GRPGPK
Trigger: CTTTGGGCCTGGCCTGCCCCATTCACCGGCCAGCGC...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGAGGGAGGTGGGGCGCTaGCCGGTGAATGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: ARPSRQRWVSLHLTPLRRREVGR*PVNGAG
Trigger: GCCTGCCCCATTCACCGGCCAGCGCCCCACCTCCCT...CCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp CACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCGCTCGCCGCGCATCGTaGGCCGTGTCGGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: HTSQEVRIHIRRLLSWAAARRAS*AVSGAS
Trigger: GCTCGCTCCCGACACGGCTCACGATGCGCGGCGAGC...GGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp CACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCAACCACCCGGCCCTaGTGGCATCCCGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: HTSQEVRIHIRRLLSWAAPTTRP*WHPAAA
Trigger: GGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGG...GGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp CACCGCCTCCAGGGCGGCCGCACAGGCCCTGGGCATCAATCCAGCAGGGCTCCCCAAGACAATCACCCCTaGCGTGGGGCTGCACCAATC +
Preference number: 4 (lower is better)
Translates to: HRLQGGRTGPGHQSSRAPQDNHP*RGAAPI
Trigger: GATTGGTGCAGCCCCACGTCAGGGGTGATTGTCTTG...GGGAGCCCTGCTGGATTGATGCCCAGGGCCTGTGCGGCCGCCCTGGAGGCGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp TCTGCCGCCCGCAGGTCAGCCACTGAGTGCCCTAGGGACACGCAGATGCCACGGAAGGAGGTGACGCCGTaGGACAGGATCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SAARRSATECPRDTQMPRKEVTP*DRILRA
Trigger: GGCCCGGAGGATCCTGTCGCACGGCGTCACCTCCTT...CCGTGGCATCTGCGTGTCCCTAGGGCACTCAGTGGCTGACCTGCGGGCGGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGGGGCCAGCGTCACGATaGGGACATTGTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRGPASR*GHCPGA
Trigger: GGCCCCTGGACAATGTCCGCATCGTGACGCTGGCCC...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGCTAGGGACACGCAGATaGCACGGGCCGTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: GGQDPHPSPAFLGCPWGLLGTRR*HGPSAP
Trigger: GGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAG...CAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGTCAGGAGCCCCACGATaGCTGGGTCGCGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRSGAPR*LGRGGG
Trigger: TCCACCACCGCGACCCAGGCATCGTGGGGCTCCTGA...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGTCAGGAGCCCCACGATaGCTGGGTCGCGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PAQAGAGQPLPKGCAAVKSGAPR*LGRGGG
Trigger: TCCACCACCGCGACCCAGGCATCGTGGGGCTCCTGA...CTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp TCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGCGAAGATGCAGCGGCCTaGGGGCAGCCGGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: SGSTSVACFPGLPLGLVGEDAAA*GQPVAG
Trigger: ACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTC...GCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGGAAGATGCAGCGGCCTaGGGGCAGCCGGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: ARPSRQRWVSLHLTPLRREDAAA*GQPVAG
Trigger: ACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTC...CCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCTCATCCCATAGAAGATaGAGCGGCCTGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GPAQAGAGQPLPKGCAAVSSHRR*SGLRAA
Trigger: GGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGA...GACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp AAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTGCGTGTGCCGGCCGTTaGCCAGGCCCAAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: KGCAAVKAEVGIPAPHTSACAGR*PGPRQG
Trigger: TCCCTGCCTTGGGCCTGGGCAACGGCCGGCACACGC...AGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGCCAGGGCCGACTCCATaGTGCAGCCTGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRPGPTP*CSLWPA
Trigger: TGCAGGCCACAGGCTGCAGCATGGAGTCGGCCCTGG...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp GCAGAGGGAAGAGAACAGTGGCAGAGCCAGGCGCGTACCTCCTGTGCCCAGGACGGCGGGGTGCAGGGATaGAGCCTCCAGGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: AEGREQWQSQARTSCAQDGGVQG*SLQGRL
Trigger: GAGTCGGCCCTGGAGGCTGCATCCCTGCACCCCGCC...GTCCTGGGCACAGGAGGTACGCGCCTGGCTCTGCCACTGTTCTCTTCCCTCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCGGCGGGGTGCAGGGATaGAGCCTCCAGGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVGGVQG*SLQGRL
Trigger: GAGTCGGCCCTGGAGGCTGCATCCCTGCACCCCGCC...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CGGTCCACTTCATGCAGACAGGCCCTGTCCCCCACTGGGGCCCAAGGCCCAGGCCTCCGGTCCACTTCATaGAGACAGGCCCTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RSTSCRQALSPTGAQGPGLRSTS*RQALSP
Trigger: GGGGGACAGGGCCTGTCTGCATGAAGTGGACCGGAG...GCCTGGGCCTTGGGCCCCAGTGGGGGACAGGGCCTGTCTGCATGAAGTGGACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCACTGTGGGCTCCACGCTaGACACCCCAACTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: AQHRQALDSHFLRGARPSLWAPR*TPQLRS
Trigger: GCTCCTGAGTTGGGGTGTGCAGCGTGGAGCCCACAG...TGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGAGATCAACCCCTTGTaGCCTGCCCCAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QALDSHFLRGARPSRQRWEINPL*PAPGPP
Trigger: GGGAGGGCCTGGGGCAGGGCACAAGGGGTTGATCTC...CCACCTCTGCCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGAGATCAACCCCTTGTaGCCTGCCCCAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PAQAGAGQPLPKGCAAVKEINPL*PAPGPP
Trigger: GGGAGGGCCTGGGGCAGGGCACAAGGGGTTGATCTC...CTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGCCTGCTTTCCTGGGCTaGCCCTGGGGCTTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PAQAGAGQPLPKGCAAVKPAFLG*PWGLWA
Trigger: AGCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGG...CTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp TTCCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACATCGAAGGAGCGGAGGTaGGCCTCGGGGTGCGCGCCC +
Preference number: 4 (lower is better)
Translates to: FLRGARPSRQRWVSLHLTSKERR*ASGCAP
Trigger: GGGCGCGCACCCCGAGGCCCACCTCCGCTCCTTCGA...TGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp TGGGGCCCAAGGCCCAGGCTAAACTACAGCCCAGCCATCCCACCCCAGGCCGTGGCTACGGCCCAACTCTaGGGCCAGCGTCACGATGCG +
Preference number: 4 (lower is better)
Translates to: WGPRPRLNYSPAIPPQAVATAQL*GQRHDA
Trigger: CGCATCGTGACGCTGGCCCCAGAGTTGGGCCGTAGC...CACGGCCTGGGGTGGGATGGCTGGGCTGTAGTTTAGCCTGGGCCTTGGGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGTCCTCTCAGCCCGGATCACTTCGTaGCTACGGCCCAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: APQPPGPDGIPLRPGVLSARITS*LRPNSG
Trigger: CCCAGAGTTGGGCCGTAGCCACGAAGTGATCCGGGC...TGAGAGGACACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CCGTCCACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCATGCCTGGGTCGCGGTaGTGGAAAGGCAGCATGGCG +
Preference number: 4 (lower is better)
Translates to: PSTSTSCCPSVCRPLPRPMPGSR*WKGSMA
Trigger: CGCCATGCTGCCTTTCCACCACCGCGACCCAGGCAT...GGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp TGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGACCAGCACCAGCCCCTaGGGATGGGCACGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: CAAVKAEVGIPAPHTSQETSTSP*GWARWA
Trigger: CGCCCACCGTGCCCATCCCCAGGGGCTGGTGCTGGT...CTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGATGCGGGCTGGGACCTaGGACCCAGTGGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: GARPSRQRWVSLHLTPLRMRAGT*DPVGQG
Trigger: GCCCTGACCCACTGGGTCCCAGGTCCCAGCCCGCAT...CCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CCA 90 bp GGAGACCAGCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGGTGAGCAGGGCACACTaGTGCCTCCCATACTGCCCT +
Preference number: 4 (lower is better)
Translates to: GDQLPNHPALMASRCGQVVSRAH*CLPYCP
Trigger: AGGGCAGTATGGGAGGCACCAGTGTGCCCTGCTCAC...CACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGCTGGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGTCCTCTCATCACCAGCTCTGGACTaGGCGTCCCGTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: APQPPGPDGIPLRPGVLSSPALD*ASRLRW
Trigger: CCACCTCAGACGGGACGCCCAGTCCAGAGCTGGTGA...TGAGAGGACACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGGCGCTGGCCGGTGAATaGGGCAGGCCAGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GGQDPHPSPAFLGCPWGLALAGE*GRPGPK
Trigger: CTTTGGGCCTGGCCTGCCCCATTCACCGGCCAGCGC...CAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGAGACCAGCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGCCAGGGCTAGCCCTGTaGACCAACCATCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GDQLPNHPALMASRCGQVPGLAL*TNHLCQ
Trigger: CTGGCAGAGATGGTTGGTCCACAGGGCTAGCCCTGG...CACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGCTGGTCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293971.11
ENST00000302956.8
CDS-3UTR TCA 90 bp GGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAAATCCCGCGCCCAGTaGCGAACCCCAGCCGAGAGC +
Preference number: 4 (lower is better)
Translates to: GARPSRQRWVSLHLTPLRKSRAQ*RTPAES
Trigger: GCTCTCGGCTGGGGTTCGTCACTGGGCGCGGGATTT...CCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293971.11
ENST00000302956.8
CDS-3UTR TCA 90 bp CCGGAGCCAAGGCGAGTCCTGCTGGGTGCACGTTTATCCCAGCCACCGCCTCCAAAATCCCGCGCCCAGTaGCGAACCCCAGCCGAGAGC +
Preference number: 4 (lower is better)
Translates to: PEPRRVLLGARLSQPPPPKSRAQ*RTPAES
Trigger: GCTCTCGGCTGGGGTTCGTCACTGGGCGCGGGATTT...TGGAGGCGGTGGCTGGGATAAACGTGCACCCAGCAGGACTCGCCTTGGCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293971.11
ENST00000302956.8
CDS-3UTR TCA 90 bp CTGGTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAATGGGGCAGAAGGAGGTaGCGCCGTGCGACAGGATCC +
Preference number: 4 (lower is better)
Translates to: LVPPILPSSTRQGHHSRQWGRRR*RRATGS
Trigger: GGATCCTGTCGCACGGCGTCACCTCCTTCTGCCCCA...TTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp AGTGCCCTAGGGACACGCAGATGCCACGGGCCGTCAGCGCCCGGATCACTTCGTTGGGGCAGAAGGAGGTaGCGCCGTGCGACAGGATCC +
Preference number: 4 (lower is better)
Translates to: SALGTRRCHGPSAPGSLRWGRRR*RRATGS
Trigger: GGATCCTGTCGCACGGCGTCACCTCCTTCTGCCCCA...ACGAAGTGATCCGGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAGGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR TCA 90 bp TGGGGCCCAAGGCCCAGGCTAAACTACAGCCCAGCCATCCCACCCCAGGCCGTGGGCTGCACCAATCCCTaGCGTCTGACCCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: WGPRPRLNYSPAIPPQAVGCTNP*RLTPLW
Trigger: CCACAGTGGGGTCAGACGTCAGGGATTGGTGCAGCC...CACGGCCTGGGGTGGGATGGCTGGGCTGTAGTTTAGCCTGGGCCTTGGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp ACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTATCCGGGAGCCAAGATaGGGCCCCCGCAGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: TSQEVRIHIRRLLSWAAPIREPR*GPRSPA
Trigger: GGCGGGACTGCGGGGGCCGCATCTTGGCTCCCGGAT...AGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CATCTGCAATCATCCCATAGAAGATGCAGCGGCCTGCGGGCAGCCGGTCGCTGGATCCGGGAGCCAAGATaGGGCCCCCGCAGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: HLQSSHRRCSGLRAAGRWIREPR*GPRSPA
Trigger: GGCGGGACTGCGGGGGCCGCATCTTGGCTCCCGGAT...CCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp GGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGAAGGAGGTGACGCCGTaGGACAGGATCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GQDPHPSPAFLGCPWGLWKEVTP*DRILRA
Trigger: GGCCCGGAGGATCCTGTCGCACGGCGTCACCTCCTT...CCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGCAGCCCGAGGACCCCTaGCCCATGGGGACCACCACT +
Preference number: 4 (lower is better)
Translates to: LSGGQDPHPSPAFLGCPWQPEDP*PMGTTT
Trigger: AGTGGTGGTCCCCATGGGGCAGGGGTCCTCGGGCTG...CCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp AGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTCAGCCCGAGGACCCCTaGCCCATGGGGACCACCACT +
Preference number: 4 (lower is better)
Translates to: RRSGSTSVACFPGLPLGLQPEDP*PMGTTT
Trigger: AGTGGTGGTCCCCATGGGGCAGGGGTCCTCGGGCTG...AAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp ACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCAAGGGGCCCTCCAGGTaGAGCCCGAGGACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: TPLRRSGSTSVACFPGLPKGPSR*SPRTPA
Trigger: GGCAGGGGTCCTCGGGCTGCACCTGGAGGGCCCCTT...GGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGGGGCCAGCGTCACGATaGGGACATTGTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GARPSRQRWVSLHLTPLRGPASR*GHCPGA
Trigger: GGCCCCTGGACAATGTCCGCATCGTGACGCTGGCCC...CCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCCTAGGGACACGCAGATaGCACGGGCCGTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVLGTRR*HGPSAP
Trigger: GGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAG...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTCCACACAGCATCCTCTaGCGCCCGCAGGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QEVRIHIRRLLSWAAPGAPHSIL*RPQVSH
Trigger: GTGGCTGACCTGCGGGCGGCAGAGGATGCTGTGTGG...AGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CTGGTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAACCACACAGCATCCTCTaGCGCCCGCAGGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LVPPILPSSTRQGHHSRQPHSIL*RPQVSH
Trigger: GTGGCTGACCTGCGGGCGGCAGAGGATGCTGTGTGG...TTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTCAGGAGCCCCACGATaGCTGGGTCGCGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GGQDPHPSPAFLGCPWGLSGAPR*LGRGGG
Trigger: TCCACCACCGCGACCCAGGCATCGTGGGGCTCCTGA...CAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGAAGATGCAGCGGCCTaGGGGCAGCCGGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: LSGGQDPHPSPAFLGCPWEDAAA*GQPVAG
Trigger: ACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTC...CCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GCCTGCAGGAAGTGCCGGACACAGACGTCCATTGGGGCTATGCTGCCACTCAGCGCGTGTGCCGGCCGTTaGCCAGGCCCAAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: ACRKCRTQTSIGAMLPLSACAGR*PGPRQG
Trigger: TCCCTGCCTTGGGCCTGGGCAACGGCCGGCACACGC...GCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp CACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCGCGTGTGCCGGCCGTTaGCCAGGCCCAAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: HTSQEVRIHIRRLLSWAAACAGR*PGPRQG
Trigger: TCCCTGCCTTGGGCCTGGGCAACGGCCGGCACACGC...GGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCATGCTGTCCCAGCGTGTaGCGGCCGTTGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RPSRQRWVSLHLTPLRRSCCPSV*RPLPRP
Trigger: GGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCA...TGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGGTCAGGGCGCTCACCTaGCACGTAGGCCGTCAGACC +
Preference number: 4 (lower is better)
Translates to: GARPSRQRWVSLHLTPLRVRALT*HVGRQT
Trigger: GGTCTGACGGCCTACGTGGCAGGTGAGCGCCCTGAC...CCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp ACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGTGGGCCACCTGGCATaGGGGCTGGGACCTGGGACC +
Preference number: 4 (lower is better)
Translates to: TSQEVRIHIRRLLSWAAPVGHLA*GLGPGT
Trigger: GGTCCCAGGTCCCAGCCCGCATGCCAGGTGGCCCAC...AGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp CACACAGCATCCTCTGCCGCCCGCAGGTCAGCCACTGAGTGCCCTAGGGACACGGGGCCGACTCCATGCTaGAGCCTGTGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: HTASSAARRSATECPRDTGPTPC*SLWPAG
Trigger: TCCTGCAGGCCACAGGCTGCAGCATGGAGTCGGCCC...CGTGTCCCTAGGGCACTCAGTGGCTGACCTGCGGGCGGCAGAGGATGCTGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp TCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGCCCAGGGCCGACTCCATaGTGCAGCCTGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SGSTSVACFPGLPLGLVGPGPTP*CSLWPA
Trigger: TGCAGGCCACAGGCTGCAGCATGGAGTCGGCCCTGG...GCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp AGTGCCCTAGGGACACGCAGATGCCACGGGCCGTCAGCGCCCGGATCACTTCGTAGCAACTGGGCGGGGTaGAGGGATGCAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SALGTRRCHGPSAPGSLRSNWAG*RDAASR
Trigger: CCTGGAGGCTGCATCCCTGCACCCCGCCCAGTTGCT...ACGAAGTGATCCGGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAGGGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp GGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGCTAGCTGCGTCCGCCTaGCACACCAGCTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: GARPSRQRWVSLHLTPLRLAASA*HTSSPE
Trigger: CTCGGGTGAGCTGGTGTGGCAGGCGGACGCAGCTAG...CCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGCTAGCTGCGTCCGCCTaGCACACCAGCTCACCCGAG +
Preference number: 4 (lower is better)
Translates to: ARPSRQRWVSLHLTPLRRLAASA*HTSSPE
Trigger: CTCGGGTGAGCTGGTGTGGCAGGCGGACGCAGCTAG...CCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GGCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAGCCAAGGCGAGTCCTaGTGGGTGCACGTTTATCCC +
Preference number: 4 (lower is better)
Translates to: GPAQAGAGQPLPKGCAAVSQGES*WVHVYP
Trigger: GGGATAAACGTGCACCCAGCAGGACTCGCCTTGGCT...GACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGACTGGTCCCCTTCCTaGCGGCTCTTCACCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GQDPHPSPAFLGCPWGLWDWSPS*RLFTPS
Trigger: GCTGGGGGTGAAGAGCCGGCAGGAAGGGGACCAGTC...CCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGCCTCAGGCGAGGCCCTaGCCAGGCAGGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GARPSRQRWVSLHLTPLRPQARP*PGRWFF
Trigger: GAAGAACCACCTGCCTGGGCAGGGCCTCGCCTGAGG...CCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp TCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGCCCTGCTTTCCTGGGCTaGCCCTGGGGCTTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SGSTSVACFPGLPLGLVGPAFLG*PWGLWA
Trigger: AGCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGG...GCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CTCCAGAAGCCCACCCGCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTGGGCCGACTCCATGCTaGAGCCTGCCACGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: LQKPTRLEAVQGASRPVFGPTPC*SLPRRP
Trigger: CGGCCTACGTGGCAGGCTGCAGCATGGAGTCGGCCC...AAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGCGGGTGGGCTTCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648227.1
CDS-3UTR CCA 90 bp TCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGCGGCAGTTAGTGAACTaGAGCACGCGGGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: SQEVRIHIRRLLSWAAPGRQLVN*STRAPA
Trigger: GGCGGGGGCCCGCGTGCTCCAGTTCACTAACTGCCG...CCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GCCACTGAGTGCCCTAGGGACACGCAGATGCCACGGGCCGTCAGCGCCCGGATCGTGGCCAGCAAGTCCTaGAAGGCATCGGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: ATECPRDTQMPRAVSARIVASKS*KASASK
Trigger: CTTCGAGGCCGATGCCTTCCAGGACTTGCTGGCCAC...GATCCGGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAGGGCACTCAGTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp GGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGAGCCCCACGATGCCTaGGTCGCGGTGGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GQDPHPSPAFLGCPWGLWEPHDA*VAVVER
Trigger: CCTTTCCACCACCGCGACCCAGGCATCGTGGGGCTC...CCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CCGGACACAGACGTCCATTGGGGCTATGCTGCCACTCAGCGTCTTGGTGCCTGCCGGGCAGCCGGTCGCTaGTCAGGAGCCCCACGATGC +
Preference number: 4 (lower is better)
Translates to: PDTDVHWGYAATQRLGACRAAGR*SGAPRC
Trigger: GCATCGTGGGGCTCCTGACCAGCGACCGGCTGCCCG...GCAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp ACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCAAGGCAGCAGGGCGGCGGGGTTaGTGTGCGTGCCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: TSTSCCPSVCRPLPRPKAAGRRG*CACHLQ
Trigger: TTGCAGATGGCACGCACACCAACCCCGCCGCCCTGC...TGCCTTGGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp CACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGTGGGGATGGGCACGGTaGGCGATCCGCAGGGCGGCG +
Preference number: 4 (lower is better)
Translates to: HLTPLRRSGSTSVACFPGWGWAR*AIRRAA
Trigger: CGCCGCCCTGCGGATCGCCCACCGTGCCCATCCCCA...CCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGACCAGCACCAGCCCCTaGGGATGGGCACGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: GRQGRGGYPCTSHLSGGQTSTSP*GWARWA
Trigger: CGCCCACCGTGCCCATCCCCAGGGGCTGGTGCTGGT...CTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGACCTGGCATGCGGGCTaGGACCTGGGACCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LSGGQDPHPSPAFLGCPWTWHAG*DLGPSG
Trigger: CCCACTGGGTCCCAGGTCCCAGCCCGCATGCCAGGT...CCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CCA 90 bp TTCCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACAGGGTCGTGGGCCACCTaGCATGCGGGCTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: FLRGARPSRQRWVSLHLTGSWAT*HAGWDL
Trigger: CAGGTCCCAGCCCGCATGCCAGGTGGCCCACGACCC...TGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CCA 90 bp CTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGCGGCCGCACAGGCCCTaGGCATCAATCCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LSGGQDPHPSPAFLGCPWRPHRP*ASIQQG
Trigger: GCCCTGCTGGATTGATGCCCAGGGCCTGTGCGGCCG...CCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGGGTGGCTTCACCCCATaGCACCAGCCACTGACTGCC +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRGGFTP*HQPLTA
Trigger: GGCAGTCAGTGGCTGGTGCCATGGGGTGAAGCCACC...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGCCCAGAACCAGGCTGTaGGCTCCACGCTGCACACCC +
Preference number: 4 (lower is better)
Translates to: GQDPHPSPAFLGCPWGLWPRTRL*APRCTP
Trigger: GGGTGTGCAGCGTGGAGCCCACAGCCTGGTTCTGGG...CCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp TGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGCCCAGTCTCCCTCCTaGAGGTCAGAGCGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: CAAVKAEVGIPAPHTSQEAQSPS*RSERSP
Trigger: GGGGCTCCGCTCTGACCTCCAGGAGGGAGACTGGGC...CTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGCGTCGCCTGCTTTCCTaGGCTGCCCCTGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: GARPSRQRWVSLHLTPLRRRLLS*AAPGAC
Trigger: ACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACG...CCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GGAGACCAGCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGCCGTCAAGGCAGAGGTaGGTATCCCTGCACCTCACA +
Preference number: 4 (lower is better)
Translates to: GDQLPNHPALMASRCGQVPSRQR*VSLHLT
Trigger: TGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGG...CACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGCTGGTCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCGCGCTGGCCGGTGAATaGGGCAGGCCAGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVALAGE*GRPGPK
Trigger: CTTTGGGCCTGGCCTGCCCCATTCACCGGCCAGCGC...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp CAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCAGCTCGCCGCGCATCGTaGGCCGTGTCGGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: QGRGGYPCTSHLSGGQDPARRAS*AVSGAS
Trigger: GCTCGCTCCCGACACGGCTCACGATGCGCGGCGAGC...TGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp CTCCAGAAGCCCACCCGCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTTCCCACCCCAGGCCGTaGATGCCTTCTCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: LQKPTRLEAVQGASRPVFSHPRP*MPSPGG
Trigger: CCCTCCTGGAGAAGGCATTCACGGCCTGGGGTGGGA...AAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGCGGGTGGGCTTCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp CCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGGGCACATCAAGCACTaGCAGCCAGCAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PAQAGAGQPLPKGCAAVKGHIKH*QPASWA
Trigger: TGCCCAGCTTGCTGGCTGTCAGTGCTTGATGTGCCC...CTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp TGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGAAGGAGGTGACGCCGTaGGACAGGATCCTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: CAAVKAEVGIPAPHTSQEKEVTP*DRILRA
Trigger: GGCCCGGAGGATCCTGTCGCACGGCGTCACCTCCTT...CTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp ACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTCAGCCCGAGGACCCCTaGCCCATGGGGACCACCACT +
Preference number: 4 (lower is better)
Translates to: TSQEVRIHIRRLLSWAAPQPEDP*PMGTTT
Trigger: AGTGGTGGTCCCCATGGGGCAGGGGTCCTCGGGCTG...AGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CTCCAGAAGCCCACCCGCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTGGGCCAGCGTCACGATaGGGACATTGTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: LQKPTRLEAVQGASRPVFGPASR*GHCPGA
Trigger: GGCCCCTGGACAATGTCCGCATCGTGACGCTGGCCC...AAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGCGGGTGGGCTTCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCCCACACAGCATCCTCTaGCGCCCGCAGGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVPHSIL*RPQVSH
Trigger: GTGGCTGACCTGCGGGCGGCAGAGGATGCTGTGTGG...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCGCGTGTGCCGGCCGTTaGCCAGGCCCAAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VGIPAPHTSQEVRIHIRRACAGR*PGPRQG
Trigger: TCCCTGCCTTGGGCCTGGGCAACGGCCGGCACACGC...GCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGTCCACTTCCACTTCCTaGTGTCCCAGCGTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRSTSTS*CPSVCR
Trigger: CCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGGA...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CTCCAGAAGCCCACCCGCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTAGCAACTGGGCGGGGTaGAGGGATGCAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LQKPTRLEAVQGASRPVFSNWAG*RDAASR
Trigger: CCTGGAGGCTGCATCCCTGCACCCCGCCCAGTTGCT...AAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGCGGGTGGGCTTCTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGCGAGGTCCTTGTCACTaGCTAGCTGCGTCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: GARPSRQRWVSLHLTPLRRGPCH*LAASAC
Trigger: GCAGGCGGACGCAGCTAGGCAGTGACAAGGACCTCG...CCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGCTGTGGGCTCCACGCTaGACACCCCAACTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GARPSRQRWVSLHLTPLRLWAPR*TPQLRS
Trigger: GCTCCTGAGTTGGGGTGTGCAGCGTGGAGCCCACAG...CCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGCTCACGGCCCGTGTTTaGCACATGGGTGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRLTARV*HMGVCQ
Trigger: CTGGCACACACCCATGTGGCAAACACGGGCCGTGAG...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGCCTCAGGCGAGGCCCTaGCCAGGCAGGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PLRRSGSTSVACFPGLPLPQARP*PGRWFF
Trigger: GAAGAACCACCTGCCTGGGCAGGGCCTCGCCTGAGG...CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp TGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGCCTCAGGCGAGGCCCTaGCCAGGCAGGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: CAAVKAEVGIPAPHTSQEPQARP*PGRWFF
Trigger: GAAGAACCACCTGCCTGGGCAGGGCCTCGCCTGAGG...CTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp AAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCCTGCTTTCCTGGGCTaGCCCTGGGGCTTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: KGCAAVKAEVGIPAPHTSPAFLG*PWGLWA
Trigger: AGCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGG...AGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp AGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTCCTGCTTTCCTGGGCTaGCCCTGGGGCTTGTGGGCT +
Preference number: 4 (lower is better)
Translates to: RRSGSTSVACFPGLPLGLPAFLG*PWGLWA
Trigger: AGCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGG...AAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTCCACATCCGTCGCCTaGTTTCCTGGGCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: QEVRIHIRRLLSWAAPGASTSVA*FPGLPL
Trigger: CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGA...AGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CTGGTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAATCCACATCCGTCGCCTaGTTTCCTGGGCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: LVPPILPSSTRQGHHSRQSTSVA*FPGLPL
Trigger: CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGA...TTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp ACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTCGGCAGTTAGTGAACTaGAGCACGCGGGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: TSQEVRIHIRRLLSWAAPRQLVN*STRAPA
Trigger: GGCGGGGGCCCGCGTGCTCCAGTTCACTAACTGCCG...AGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGGCCCGGATCACTTCGTaGCTACGGCCCAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: ARPSRQRWVSLHLTPLRRARITS*LRPNSG
Trigger: CCCAGAGTTGGGCCGTAGCCACGAAGTGATCCGGGC...CCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTATGCCTGGGTCGCGGTaGTGGAAAGGCAGCATGGCG +
Preference number: 4 (lower is better)
Translates to: QEVRIHIRRLLSWAAPGAMPGSR*WKGSMA
Trigger: CGCCATGCTGCCTTTCCACCACCGCGACCCAGGCAT...AGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGCAGGGCGGCGGGGTTaGTGTGCGTGCCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: RSGSTSVACFPGLPLGLVAGRRG*CACHLQ
Trigger: TTGCAGATGGCACGCACACCAACCCCGCCGCCCTGC...CACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp TCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCAGGGCGGCGGGGTTaGTGTGCGTGCCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: SQEVRIHIRRLLSWAAPGAGRRG*CACHLQ
Trigger: TTGCAGATGGCACGCACACCAACCCCGCCGCCCTGC...CCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GGCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCTGCCACTCAGCGTCTTaGTGCCTTGAGAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GPAQAGAGQPLPKGCAAVCHSAS*CLESRE
Trigger: CTCTCTGCTCTCAAGGCACCAAGACGCTGAGTGGCA...GACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCTCCAGCCCCAGCAACTaGGCGGGGTGCAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVSSPSN*AGCRDA
Trigger: TGCATCCCTGCACCCCGCCCAGTTGCTGGGGCTGGA...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGTCCAGCCCCAGCAACTaGGCGGGGTGCAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: PLRRSGSTSVACFPGLPLSSPSN*AGCRDA
Trigger: TGCATCCCTGCACCCCGCCCAGTTGCTGGGGCTGGA...CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGTCCAGCCCCAGCAACTaGGCGGGGTGCAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: RSGSTSVACFPGLPLGLVSSPSN*AGCRDA
Trigger: TGCATCCCTGCACCCCGCCCAGTTGCTGGGGCTGGA...CACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp TCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGCGGTGGCTTCACCCCATaGCACCAGCCACTGACTGCC +
Preference number: 4 (lower is better)
Translates to: SGSTSVACFPGLPLGLVGGGFTP*HQPLTA
Trigger: GGCAGTCAGTGGCTGGTGCCATGGGGTGAAGCCACC...GCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGGTGAGCAGGGCACACTaGTGCCTCCCATACTGCCCT +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRVSRAH*CLPYCP
Trigger: AGGGCAGTATGGGAGGCACCAGTGTGCCCTGCTCAC...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp TGGGGCCCAAGGCCCAGGCTAAACTACAGCCCAGCCATCCCACCCCAGGCCGTGGAGGGAAGAGAACAGTaGCAGAGCCAGGCGCGTACC +
Preference number: 4 (lower is better)
Translates to: WGPRPRLNYSPAIPPQAVEGREQ*QSQART
Trigger: GGTACGCGCCTGGCTCTGCCACTGTTCTCTTCCCTC...CACGGCCTGGGGTGGGATGGCTGGGCTGTAGTTTAGCCTGGGCCTTGGGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTCGTCGCCTGCTTTCCTaGGCTGCCCCTGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: RRSGSTSVACFPGLPLGLRRLLS*AAPGAC
Trigger: ACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACG...AAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGCGTCGCCTGCTTTCCTaGGCTGCCCCTGGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: RSGSTSVACFPGLPLGLVRRLLS*AAPGAC
Trigger: ACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACG...CACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGCCTGCCTGGGAGCCCTaGCAAGACAGCTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PLRRSGSTSVACFPGLPLPAWEP*QDSSSP
Trigger: GGGAGAGGAGCTGTCTTGCCAGGGCTCCCAGGCAGG...CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp TGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGCCTGCCTGGGAGCCCTaGCAAGACAGCTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CAAVKAEVGIPAPHTSQEPAWEP*QDSSSP
Trigger: GGGAGAGGAGCTGTCTTGCCAGGGCTCCCAGGCAGG...CTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGAGGGAGGTGGGGCGCTaGCCGGTGAATGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: APHTSQEVRIHIRRLLSWREVGR*PVNGAG
Trigger: GCCTGCCCCATTCACCGGCCAGCGCCCCACCTCCCT...CCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGAGGGAGGTGGGGCGCTaGCCGGTGAATGGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GGYPCTSHLSGGQDPHPSREVGR*PVNGAG
Trigger: GCCTGCCCCATTCACCGGCCAGCGCCCCACCTCCCT...CGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CAA 72 bp GCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTaGCCACATGGGTGTGTGCCAGGGCCAAGGGGACAC +
Preference number: 4 (lower is better)
Translates to: ASKLFREPHGPC*PHGCVPGPRGH
Trigger: GTGTCCCCTTGGCCCTGGCACACACCCATGTGGCAAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp ACCAAGGATGGTGCCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCGCTCGCCGCGCATCGTaGGCCGTGTCGGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: TKDGATCEHKQNPEPRRVARRAS*AVSGAS
Trigger: GCTCGCTCCCGACACGGCTCACGATGCGCGGCGAGC...GACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCCTTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp GTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAAGCAAGCGTCTTGGTGCCTTaGGAGCAGAGAGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: VPPILPSSTRQGHHSRQASVLVP*EQRGQA
Trigger: AGCCTGCCCTCTCTGCTCTCAAGGCACCAAGACGCT...TGCTTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000302956.8
CDS-3UTR TCA 90 bp CCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGCTGCACCAATCCCTaGCGTCTGACCCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: PLRRSGSTSVACFPGLPLGCTNP*RLTPLW
Trigger: CCACAGTGGGGTCAGACGTCAGGGATTGGTGCAGCC...CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp TCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGGCTGCACCAATCCCTaGCGTCTGACCCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: SQEVRIHIRRLLSWAAPGGCTNP*RLTPLW
Trigger: CCACAGTGGGGTCAGACGTCAGGGATTGGTGCAGCC...CCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp TCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGCGGGCACATCAAGCACTaGCAGCCAGCAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: SGSTSVACFPGLPLGLVGGHIKH*QPASWA
Trigger: TGCCCAGCTTGCTGGCTGTCAGTGCTTGATGTGCCC...GCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp GCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGACTGGGCGTCCCGTCTaGGGTGGGGATGACCAACAT +
Preference number: 4 (lower is better)
Translates to: ARPSRQRWVSLHLTPLRRTGRPV*GGDDQH
Trigger: ATGTTGGTCATCCCCACCTCAGACGGGACGCCCAGT...CCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGTCTCTGGGTCCAAGATaGGGCCTCCGCGCACCCACA +
Preference number: 4 (lower is better)
Translates to: PLRRSGSTSVACFPGLPLSLGPR*GLRAPT
Trigger: TGTGGGTGCGCGGAGGCCGCATCTTGGACCCAGAGA...CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTAAGGGGCCCTCCAGGTaGAGCCCGAGGACCCCTGCC +
Preference number: 4 (lower is better)
Translates to: EVGIPAPHTSQEVRIHIRKGPSR*SPRTPA
Trigger: GGCAGGGGTCCTCGGGCTGCACCTGGAGGGCCCCTT...ACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTAGGGACACGCAGATaGCACGGGCCGTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: VGIPAPHTSQEVRIHIRRLGTRR*HGPSAP
Trigger: GGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAG...GCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CCGGACACAGACGTCCATTGGGGCTATGCTGCCACTCAGCGTCTTGGTGCCTGCTCAGGAGCCCCACGATaGCTGGGTCGCGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: PDTDVHWGYAATQRLGACSGAPR*LGRGGG
Trigger: TCCACCACCGCGACCCAGGCATCGTGGGGCTCCTGA...GCAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp ATCTGCAATCATCCCATAGAAGATGCAGCGGCCTGCGGGCAGCCGGTCGCTGGTGAAGATGCAGCGGCCTaGGGGCAGCCGGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: ICNHPIEDAAACGQPVAGEDAAA*GQPVAG
Trigger: ACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTC...ACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp CCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCATCCCATAGAAGATaGAGCGGCCTGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PKGCAAVKAEVGIPAPHTSSHRR*SGLRAA
Trigger: GGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGA...GGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp ACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCAAGGCAGCGGCGGGGTTGGTGTaGGTGCCATCTGCAATCATC +
Preference number: 4 (lower is better)
Translates to: TSTSCCPSVCRPLPRPKAAAGLV*VPSAII
Trigger: GATGATTGCAGATGGCACGCACACCAACCCCGCCGC...TGCCTTGGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp AAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACGTGGGCCACCTGGCATaGGGGCTGGGACCTGGGACC +
Preference number: 4 (lower is better)
Translates to: KAEVGIPAPHTSQEVRIHVGHLA*GLGPGT
Trigger: GGTCCCAGGTCCCAGCCCGCATGCCAGGTGGCCCAC...GTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGGTGGCCTGCAGGAAGTaGCGGACACAGACGTCCATT +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRVACRK*RTQTSI
Trigger: AATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCAC...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp GGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGGGCCGACTCCATGCTaGAGCCTGTGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GRQGRGGYPCTSHLSGGQGPTPC*SLWPAG
Trigger: TCCTGCAGGCCACAGGCTGCAGCATGGAGTCGGCCC...CTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp CCGGACACAGACGTCCATTGGGGCTATGCTGCCACTCAGCGTCTTGGTGCCTGCCCAGGGCCGACTCCATaGTGCAGCCTGTGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: PDTDVHWGYAATQRLGACPGPTP*CSLWPA
Trigger: TGCAGGCCACAGGCTGCAGCATGGAGTCGGCCCTGG...GCAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp GTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCGGCGGGGTGCAGGGATaGAGCCTCCAGGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: VKAEVGIPAPHTSQEVRIGGVQG*SLQGRL
Trigger: GAGTCGGCCCTGGAGGCTGCATCCCTGCACCCCGCC...GATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp ACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTAGCAACTGGGCGGGGTaGAGGGATGCAGCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TSQEVRIHIRRLLSWAAPSNWAG*RDAASR
Trigger: CCTGGAGGCTGCATCCCTGCACCCCGCCCAGTTGCT...AGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCCTGATGGCATCCCGCTaGGGCCAGGTGTCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVLMASR*GQVSSQ
Trigger: CTGAGAGGACACCTGGCCGCAGCGGGATGCCATCAG...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp TCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGCTCCGGTCCACTTCATaGAGACAGGCCCTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: SQEVRIHIRRLLSWAAPGLRSTS*RQALSP
Trigger: GGGGGACAGGGCCTGTCTGCATGAAGTGGACCGGAG...CCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CTCCAGAAGCCCACCCGCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTCTGTGGGCTCCACGCTaGACACCCCAACTCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LQKPTRLEAVQGASRPVFLWAPR*TPQLRS
Trigger: GCTCCTGAGTTGGGGTGTGCAGCGTGGAGCCCACAG...AAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGCGGGTGGGCTTCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp AAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTTGGTGCCTCCCATACTaGCCTCCAGCACCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: KGCAAVKAEVGIPAPHTSWCLPY*PPAPGR
Trigger: CCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCA...AGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGCAGGGCACACTGGTaGCTCCCATACTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GARPSRQRWVSLHLTPLRSRAHW*LPYCPP
Trigger: TGGAGGGCAGTATGGGAGGCACCAGTGTGCCCTGCT...CCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CTGGTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAATGCCACATGGGTGTGTaGCAGGGCCAAGGGGACACA +
Preference number: 4 (lower is better)
Translates to: LVPPILPSSTRQGHHSRQCHMGV*QGQGDT
Trigger: TGTGTCCCCTTGGCCCTGGCACACACCCATGTGGCA...TTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTGCCACATGGGTGTGTaGCAGGGCCAAGGGGACACA +
Preference number: 4 (lower is better)
Translates to: ARPSRQRWVSLHLTPLRRCHMGV*QGQGDT
Trigger: TGTGTCCCCTTGGCCCTGGCACACACCCATGTGGCA...CCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGAGATCAACCCCTTGTaGCCTGCCCCAGGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RPSRQRWVSLHLTPLRRSEINPL*PAPGPP
Trigger: GGGAGGGCCTGGGGCAGGGCACAAGGGGTTGATCTC...TGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CGGTCCACTTCATGCAGACAGGCCCTGTCCCCCACTGGGGCCCAAGGCCCAGGCGCTGGGCACAGGCGATaGTCAACCTCTAACACATCG +
Preference number: 4 (lower is better)
Translates to: RSTSCRQALSPTGAQGPGAGHRR*STSNTS
Trigger: CGATGTGTTAGAGGTTGAGCATCGCCTGTGCCCAGC...GCCTGGGCCTTGGGCCCCAGTGGGGGACAGGGCCTGTCTGCATGAAGTGGACCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGTCCTCTCAGCTGGGCACAGGCGATaGTCAACCTCTAACACATCG +
Preference number: 4 (lower is better)
Translates to: APQPPGPDGIPLRPGVLSAGHRR*STSNTS
Trigger: CGATGTGTTAGAGGTTGAGCATCGCCTGTGCCCAGC...TGAGAGGACACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGCCAGGGCCGACTCCATaGTGCAGCCTGCCACGTAGG +
Preference number: 4 (lower is better)
Translates to: GRQGRGGYPCTSHLSGGQPGPTP*CSLPRR
Trigger: CCTACGTGGCAGGCTGCAGCATGGAGTCGGCCCTGG...CTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648227.1
CDS-3UTR CCA 90 bp GGAGACCAGCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGAACCCACGTCCTCCGTaGCTTGAGAGAAGTCAACAC +
Preference number: 4 (lower is better)
Translates to: GDQLPNHPALMASRCGQVNPRPP*LERSQH
Trigger: GTGTTGACTTCTCTCAAGCCACGGAGGACGTGGGTT...CACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGCTGGTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGTGGCCAGCAAGTCCTaGAAGGCATCGGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: GQDPHPSPAFLGCPWGLWVASKS*KASASK
Trigger: CTTCGAGGCCGATGCCTTCCAGGACTTGCTGGCCAC...CCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCAGGGGCCCGTAGGTaGCCAGCAAGTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: HTSQEVRIHIRRLLSWAAPGARR*PASPGR
Trigger: CCTTCCAGGACTTGCTGGCCACCTACGGGCCCCTGG...GGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTGCCACATGGGTGTGTGGCTACGGCCCAACTCTaGGGCCAGCGTCACGATGCG +
Preference number: 4 (lower is better)
Translates to: ASKLFREPHGPCLPHGCVATAQL*GQRHDA
Trigger: CGCATCGTGACGCTGGCCCCAGAGTTGGGCCGTAGC...CACACACCCATGTGGCAAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CATCTGCAATCATCCCATAGAAGATGCAGCGGCCTGCGGGCAGCCGGTCGCTGGGCTACGGCCCAACTCTaGGGCCAGCGTCACGATGCG +
Preference number: 4 (lower is better)
Translates to: HLQSSHRRCSGLRAAGRWATAQL*GQRHDA
Trigger: CGCATCGTGACGCTGGCCCCAGAGTTGGGCCGTAGC...CCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCGCCCGGATCACTTCGTaGCTACGGCCCAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVARITS*LRPNSG
Trigger: CCCAGAGTTGGGCCGTAGCCACGAAGTGATCCGGGC...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GCCACTGAGTGCCCTAGGGACACGCAGATGCCACGGGCCGTCAGCGCCCGGATCATGGCGTTGAAGAGGTaGGTGATGAAGGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ATECPRDTQMPRAVSARIMALKR*VMKVAP
Trigger: CGGAGCCACCTTCATCACCCACCTCTTCAACGCCAT...GATCCGGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAGGGCACTCAGTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp CTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGATGCCTGGGTCGCGGTaGTGGAAAGGCAGCATGGCG +
Preference number: 4 (lower is better)
Translates to: LSGGQDPHPSPAFLGCPWMPGSR*WKGSMA
Trigger: CGCCATGCTGCCTTTCCACCACCGCGACCCAGGCAT...CCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGAGCCCCACGATGCCTaGGTCGCGGTGGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: RPSRQRWVSLHLTPLRRSEPHDA*VAVVER
Trigger: CCTTTCCACCACCGCGACCCAGGCATCGTGGGGCTC...TGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACGGGCAGCCGGTCGCTaGTCAGGAGCCCCACGATGC +
Preference number: 4 (lower is better)
Translates to: QGRGGYPCTSHLSGGQDPRAAGR*SGAPRC
Trigger: GCATCGTGGGGCTCCTGACCAGCGACCGGCTGCCCG...TGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CCACGCTGCACACCCCAACTCAGGAGCAGAAAGCAAACCCCTGACTGTCCACACACCAGCACCAGCCCCTaGGGATGGGCACGGTGGGCG +
Preference number: 4 (lower is better)
Translates to: PRCTPQLRSRKQTPDCPHTSTSP*GWARWA
Trigger: CGCCCACCGTGCCCATCCCCAGGGGCTGGTGCTGGT...GTGTGGACAGTCAGGGGTTTGCTTTCTGCTCCTGAGTTGGGGTGTGCAGCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGACCTGGCATGCGGGCTaGGACCTGGGACCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: APHTSQEVRIHIRRLLSWTWHAG*DLGPSG
Trigger: CCCACTGGGTCCCAGGTCCCAGCCCGCATGCCAGGT...CCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CCA 90 bp AGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTCCATGCTGCAGCCTGTaGCCTGCAGGAAGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: RRSGSTSVACFPGLPLGLPCCSL*PAGSAG
Trigger: TCCGGCACTTCCTGCAGGCCACAGGCTGCAGCATGG...AAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CCA 90 bp CCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGCAAGGCGAGTCCTGCTaGGTGCACGTTTATCCCAGC +
Preference number: 4 (lower is better)
Translates to: PAQAGAGQPLPKGCAAVKQGESC*VHVYPS
Trigger: GCTGGGATAAACGTGCACCCAGCAGGACTCGCCTTG...CTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp TGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGACCCCCAGCCCATGGTaGCTTCACCCCATGGCACCA +
Preference number: 4 (lower is better)
Translates to: CAAVKAEVGIPAPHTSQETPSPW*LHPMAP
Trigger: TGGTGCCATGGGGTGAAGCCACCATGGGCTGGGGGT...CTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGACCCCCAGCCCATGGTaGCTTCACCCCATGGCACCA +
Preference number: 4 (lower is better)
Translates to: RSGSTSVACFPGLPLGLVTPSPW*LHPMAP
Trigger: TGGTGCCATGGGGTGAAGCCACCATGGGCTGGGGGT...CACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCGCCCAGTCTCCCTCCTaGAGGTCAGAGCGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: PCTSHLSGGQDPHPSPAFAQSPS*RSERSP
Trigger: GGGGCTCCGCTCTGACCTCCAGGAGGGAGACTGGGC...GAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTGTGAGCAGGGCACACTaGTGCCTCCCATACTGCCCT +
Preference number: 4 (lower is better)
Translates to: QEVRIHIRRLLSWAAPGAVSRAH*CLPYCP
Trigger: AGGGCAGTATGGGAGGCACCAGTGTGCCCTGCTCAC...AGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CTGGTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAAGTGAGCAGGGCACACTaGTGCCTCCCATACTGCCCT +
Preference number: 4 (lower is better)
Translates to: LVPPILPSSTRQGHHSRQVSRAH*CLPYCP
Trigger: AGGGCAGTATGGGAGGCACCAGTGTGCCCTGCTCAC...TTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGCCCGTGTTTGCCACATaGGTGTGTGCCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GQDPHPSPAFLGCPWGLWPVFAT*VCARAK
Trigger: CTTGGCCCTGGCACACACCCATGTGGCAAACACGGG...CCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTCCCGTGTTTGCCACATaGGTGTGTGCCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QEVRIHIRRLLSWAAPGAPVFAT*VCARAK
Trigger: CTTGGCCCTGGCACACACCCATGTGGCAAACACGGG...AGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CTCCAGAAGCCCACCCGCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTTCACCAGCTCTGGACTaGGCGTCCCGTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LQKPTRLEAVQGASRPVFSPALD*ASRLRW
Trigger: CCACCTCAGACGGGACGCCCAGTCCAGAGCTGGTGA...AAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGCGGGTGGGCTTCTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GCAGAGGGAAGAGAACAGTGGCAGAGCCAGGCGCGTACCTCCTGTGCCCAGGACTGCCACTCAGCGTCTTaGTGCCTGCCACGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: AEGREQWQSQARTSCAQDCHSAS*CLPRRP
Trigger: CGGCCTACGTGGCAGGCACCAAGACGCTGAGTGGCA...GTCCTGGGCACAGGAGGTACGCGCCTGGCTCTGCCACTGTTCTCTTCCCTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000293971.11
CDS-3UTR CCA 90 bp GGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGGCCCGAGATGTAGGTaGCCTGGACGTGAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GQDPHPSPAFLGCPWGLWGPRCR*PGREGS
Trigger: ACTCCCTTCACGTCCAGGCCACCTACATCTCGGGCC...CCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413459.7
CDS-3UTR TCA 90 bp ACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGGGGCAGAAGGAGGTaGCGCCGTGCGACAGGATCC +
Preference number: 4 (lower is better)
Translates to: TSHLSGGQDPHPSPAFLGWGRRR*RRATGS
Trigger: GGATCCTGTCGCACGGCGTCACCTCCTTCTGCCCCA...GCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp TCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGAGCGTCTTGGTGCCTTaGGAGCAGAGAGGGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SQEVRIHIRRLLSWAAPGSVLVP*EQRGQA
Trigger: AGCCTGCCCTCTCTGCTCTCAAGGCACCAAGACGCT...CCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR TCA 90 bp CACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCTGTCCACACTCCCTGTaGCTGGTCCCCTTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: HTSQEVRIHIRRLLSWAACPHSL*LVPFLP
Trigger: CGGCAGGAAGGGGACCAGTCACAGGGAGTGTGGACA...GGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp CTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGCCAATCCCTGACGTCTaGCCCCACTGTGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LSGGQDPHPSPAFLGCPWPIPDV*PHCGCP
Trigger: AGGACAGCCACAGTGGGGTCAGACGTCAGGGATTGG...CCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTGCCACATGGGTGTGTGTCTCTGGGTCCAAGATaGGGCCTCCGCGCACCCACA +
Preference number: 4 (lower is better)
Translates to: ASKLFREPHGPCLPHGCVSLGPR*GLRAPT
Trigger: TGTGGGTGCGCGGAGGCCGCATCTTGGACCCAGAGA...CACACACCCATGTGGCAAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGTCTCTGGGTCCAAGATaGGGCCTCCGCGCACCCACA +
Preference number: 4 (lower is better)
Translates to: GRQGRGGYPCTSHLSGGQSLGPR*GLRAPT
Trigger: TGTGGGTGCGCGGAGGCCGCATCTTGGACCCAGAGA...CTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAATCCACCGTTGATCTaGACGTCGATGAATCCGGGA +
Preference number: 4 (lower is better)
Translates to: GPAQAGAGQPLPKGCAAVNPPLI*TSMNPG
Trigger: TCCCGGATTCATCGACGTGCAGATCAACGGTGGATT...GACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACTAGGGACACGCAGATaGCACGGGCCGTCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: QGRGGYPCTSHLSGGQDPLGTRR*HGPSAP
Trigger: GGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAG...TGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTAGGTCAGCCACTGAGTaGCCTAGGGACACGCAGATG +
Preference number: 4 (lower is better)
Translates to: QEVRIHIRRLLSWAAPGARSATE*PRDTQM
Trigger: CATCTGCGTGTCCCTAGGGCACTCAGTGGCTGACCT...AGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGAGGTCAGCCACTGAGTaGCCTAGGGACACGCAGATG +
Preference number: 4 (lower is better)
Translates to: GQDPHPSPAFLGCPWGLWRSATE*PRDTQM
Trigger: CATCTGCGTGTCCCTAGGGCACTCAGTGGCTGACCT...CCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCACACAGCATCCTCTaGCGCCCGCAGGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GGYPCTSHLSGGQDPHPSPHSIL*RPQVSH
Trigger: GTGGCTGACCTGCGGGCGGCAGAGGATGCTGTGTGG...CGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGTCAGGAGCCCCACGATaGCTGGGTCGCGGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GGYPCTSHLSGGQDPHPSSGAPR*LGRGGG
Trigger: TCCACCACCGCGACCCAGGCATCGTGGGGCTCCTGA...CGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCTCATCCCATAGAAGATaGAGCGGCCTGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVSSHRR*SGLRAA
Trigger: GGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGA...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp TCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCGGCGGGGTTGGTGTaGGTGCCATCTGCAATCATC +
Preference number: 4 (lower is better)
Translates to: SQEVRIHIRRLLSWAAPGAAGLV*VPSAII
Trigger: GATGATTGCAGATGGCACGCACACCAACCCCGCCGC...CCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGTCCACTTCCACTTCCTaGTGTCCCAGCGTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: PLRRSGSTSVACFPGLPLSTSTS*CPSVCR
Trigger: CCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGGA...CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGCCATTGGGGCTATGCTaGCACTCAGCGTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GARPSRQRWVSLHLTPLRPLGLC*HSASWC
Trigger: GCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGG...CCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp ACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCAAGGCACGTCCATTGGGGCTATaGTGCCACTCAGCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: TSTSCCPSVCRPLPRPKARPLGL*CHSASW
Trigger: CCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACG...TGCCTTGGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp TCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGCGTGGCCTGCAGGAAGTaGCGGACACAGACGTCCATT +
Preference number: 4 (lower is better)
Translates to: SGSTSVACFPGLPLGLVGVACRK*RTQTSI
Trigger: AATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCAC...GCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp CTAGGGACACGCAGATGCCACGGGCCGTCAGCGCCCGGATCACTTCGTGGCTACGTGGCCTGCAGGAAGTaGCGGACACAGACGTCCATT +
Preference number: 4 (lower is better)
Translates to: LGTRRCHGPSAPGSLRGYVACRK*RTQTSI
Trigger: AATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCAC...GTAGCCACGAAGTGATCCGGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp GCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGGGCCGACTCCATGCTaGAGCCTGTGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: APHTSQEVRIHIRRLLSWGPTPC*SLWPAG
Trigger: TCCTGCAGGCCACAGGCTGCAGCATGGAGTCGGCCC...CCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp ACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGATGGCATCCCGCTaGGGCCAGGTGTCCTCTCAG +
Preference number: 4 (lower is better)
Translates to: TPLRRSGSTSVACFPGLPLMASR*GQVSSQ
Trigger: CTGAGAGGACACCTGGCCGCAGCGGGATGCCATCAG...GGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp TGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGCGAGTCCTGCTGGGTaGACGTTTATCCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: CAAVKAEVGIPAPHTSQEASPAG*TFIPAT
Trigger: GGTGGCTGGGATAAACGTGCACCCAGCAGGACTCGC...CTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp TCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCGAGTCCTGCTGGGTaGACGTTTATCCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: SQEVRIHIRRLLSWAAPGASPAG*TFIPAT
Trigger: GGTGGCTGGGATAAACGTGCACCCAGCAGGACTCGC...CCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCACTCCGGTCCACTTCATaGAGACAGGCCCTGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RPSRQRWVSLHLTPLRRSLRSTS*RQALSP
Trigger: GGGGGACAGGGCCTGTCTGCATGAAGTGGACCGGAG...TGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CTGGTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAACACTTTCCTGGGGTCTaGAGGTCTCCGGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: LVPPILPSSTRQGHHSRQHFPGV*RSPVHF
Trigger: GAAGTGGACCGGAGACCTGCAGACCCCAGGAAAGTG...TTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CTGGGCGTCCCGTCTGAGGTGGGGATGACCAACATGCCAGCTCTGGGTTTTAGCGACTGGTCCCCTTCCTaGCGGCTCTTCACCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LGVPSEVGMTNMPALGFSDWSPS*RLFTPS
Trigger: GCTGGGGGTGAAGAGCCGGCAGGAAGGGGACCAGTC...GCTAAAACCCAGAGCTGGCATGTTGGTCATCCCCACCTCAGACGGGACGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp ACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCTGGTGCCTCCCATACTaGCCTCCAGCACCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TPLRRSGSTSVACFPGLPWCLPY*PPAPGR
Trigger: CCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCA...GGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGAGCAGGGCACACTGGTaGCTCCCATACTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LSGGQDPHPSPAFLGCPWSRAHW*LPYCPP
Trigger: TGGAGGGCAGTATGGGAGGCACCAGTGTGCCCTGCT...CCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CTTCATGCAGACAGGCCCTGTCCCCCACTGGGGCCCAAGGCCCAGGCTAAACTACCACTTCCTAAGGGGTaGGCGGCCGTCAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LHADRPCPPLGPKAQAKLPLPKG*AAVKAE
Trigger: CTCTGCCTTGACGGCCGCGCACCCCTTAGGAAGTGG...TAGTTTAGCCTGGGCCTTGGGCCCCAGTGGGGGACAGGGCCTGTCTGCATGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCACCACTTCCTAAGGGGTaGGCGGCCGTCAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RPSRQRWVSLHLTPLRRSPLPKG*AAVKAE
Trigger: CTCTGCCTTGACGGCCGCGCACCCCTTAGGAAGTGG...TGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGGCTGGGCACAGGCGATaGTCAACCTCTAACACATCG +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRAGHRR*STSNTS
Trigger: CGATGTGTTAGAGGTTGAGCATCGCCTGTGCCCAGC...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGACCTCAAAATCATCCTaGAGCAGCTCCCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QALDSHFLRGARPSRQRWTSKSS*SSSLAQ
Trigger: CTGGGCCAGGGAGCTGCTGCAGGATGATTTTGAGGT...CCACCTCTGCCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000293971.11
ENST00000302956.8
CDS-3UTR CCA 90 bp CCACGCTGCACACCCCAACTCAGGAGCAGAAAGCAAACCCCTGACTGTCCACACCGGCAGTTAGTGAACTaGAGCACGCGGGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: PRCTPQLRSRKQTPDCPHRQLVN*STRAPA
Trigger: GGCGGGGGCCCGCGTGCTCCAGTTCACTAACTGCCG...GTGTGGACAGTCAGGGGTTTGCTTTCTGCTCCTGAGTTGGGGTGTGCAGCGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACGGCAGTTAGTGAACTaGAGCACGCGGGCCCCCGCC +
Preference number: 4 (lower is better)
Translates to: QGRGGYPCTSHLSGGQDPRQLVN*STRAPA
Trigger: GGCGGGGGCCCGCGTGCTCCAGTTCACTAACTGCCG...TGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp AGTGCCCTAGGGACACGCAGATGCCACGGGCCGTCAGCGCCCGGATCACTTCGTGTGATAAACCTCCGGTaGGGAAGTGACCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SALGTRRCHGPSAPGSLRVINLR*GSDQGG
Trigger: CCCACCCTGGTCACTTCCCCACCGGAGGTTTATCAC...ACGAAGTGATCCGGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAGGGCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp CTCCAGAAGCCCACCCGCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTGTGGCCAGCAAGTCCTaGAAGGCATCGGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: LQKPTRLEAVQGASRPVFVASKS*KASASK
Trigger: CTTCGAGGCCGATGCCTTCCAGGACTTGCTGGCCAC...AAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGCGGGTGGGCTTCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CTGGGCGTCCCGTCTGAGGTGGGGATGACCAACATGCCAGCTCTGGGTTTTAGCCCAGGGGCCCGTAGGTaGCCAGCAAGTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: LGVPSEVGMTNMPALGFSPGARR*PASPGR
Trigger: CCTTCCAGGACTTGCTGGCCACCTACGGGCCCCTGG...GCTAAAACCCAGAGCTGGCATGTTGGTCATCCCCACCTCAGACGGGACGCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTACGGCCCAACTCTaGGGCCAGCGTCACGATGCG +
Preference number: 4 (lower is better)
Translates to: APHTSQEVRIHIRRLLSWATAQL*GQRHDA
Trigger: CGCATCGTGACGCTGGCCCCAGAGTTGGGCCGTAGC...CCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp TCAGCGTCTTGGTGCCTGCCACGTAGGCCGTCAGACCGTCCACTTCCACTTCCTGAGCCCCACGATGCCTaGGTCGCGGTGGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SASWCLPRRPSDRPLPLPEPHDA*VAVVER
Trigger: CCTTTCCACCACCGCGACCCAGGCATCGTGGGGCTC...AGGAAGTGGAAGTGGACGGTCTGACGGCCTACGTGGCAGGCACCAAGACGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp GGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGGCAGGGCGGCGGGGTTaGTGTGCGTGCCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: GGYPCTSHLSGGQDPHPSAGRRG*CACHLQ
Trigger: TTGCAGATGGCACGCACACCAACCCCGCCGCCCTGC...CGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp ATCTGCAATCATCCCATAGAAGATGCAGCGGCCTGCGGGCAGCCGGTCGCTGGTTCCAGCCCCAGCAACTaGGCGGGGTGCAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: ICNHPIEDAAACGQPVAGSSPSN*AGCRDA
Trigger: TGCATCCCTGCACCCCGCCCAGTTGCTGGGGCTGGA...ACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp GGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGCACCCGAGATGTAGGTaGCCTGGACGTGAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: GGQDPHPSPAFLGCPWGLHPRCR*PGREGS
Trigger: ACTCCCTTCACGTCCAGGCCACCTACATCTCGGGTG...CAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp AAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACCGGCCGCACAGGCCCTaGGCATCAATCCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: KAEVGIPAPHTSQEVRIHRPHRP*ASIQQG
Trigger: GCCCTGCTGGATTGATGCCCAGGGCCTGTGCGGCCG...GTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGCAAGGCGAGTCCTGCTaGGTGCACGTTTATCCCAGC +
Preference number: 4 (lower is better)
Translates to: GGQDPHPSPAFLGCPWGLQGESC*VHVYPS
Trigger: GCTGGGATAAACGTGCACCCAGCAGGACTCGCCTTG...CAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGCCCAGAACCAGGCTGTaGGCTCCACGCTGCACACCC +
Preference number: 4 (lower is better)
Translates to: APHTSQEVRIHIRRLLSWPRTRL*APRCTP
Trigger: GGGTGTGCAGCGTGGAGCCCACAGCCTGGTTCTGGG...CCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCAGAGCGGAGCCCCTaGCACTGTGCCCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RQRWVSLHLTPLRRSGSTSERSP*HCALAQ
Trigger: CTGGGCCAGGGCACAGTGCCAGGGGCTCCGCTCTGA...TGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp TCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGCAACGCTGGTCATCCGTaGCACTCAGGGCTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SGSTSVACFPGLPLGLVGNAGHP*HSGLGS
Trigger: ACTGCCTAGCCCTGAGTGCCACGGATGACCAGCGTT...GCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTAACGCTGGTCATCCGTaGCACTCAGGGCTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: QEVRIHIRRLLSWAAPGANAGHP*HSGLGS
Trigger: ACTGCCTAGCCCTGAGTGCCACGGATGACCAGCGTT...AGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGAGACCAGCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGAGGGGACACAGAAGATaGCAGGATGACACTAATGGG +
Preference number: 4 (lower is better)
Translates to: GDQLPNHPALMASRCGQVRGHRR*QDDTNG
Trigger: CCCATTAGTGTCATCCTGCCATCTTCTGTGTCCCCT...CACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGCTGGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAGGGGACACAGAAGATaGCAGGATGACACTAATGGG +
Preference number: 4 (lower is better)
Translates to: GPAQAGAGQPLPKGCAAVRGHRR*QDDTNG
Trigger: CCCATTAGTGTCATCCTGCCATCTTCTGTGTCCCCT...GACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCCCCGTGTTTGCCACATaGGTGTGTGCCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVPVFAT*VCARAK
Trigger: CTTGGCCCTGGCACACACCCATGTGGCAAACACGGG...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGCAGGTGGTTCTTCCCTaGCTGTTCCCTTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: PAQAGAGQPLPKGCAAVKQVVLP*LFPSNR
Trigger: CCTGTTGGAAGGGAACAGCCAGGGAAGAACCACCTG...CTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGCAGGTGGTTCTTCCCTaGCTGTTCCCTTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRQVVLP*LFPSNR
Trigger: CCTGTTGGAAGGGAACAGCCAGGGAAGAACCACCTG...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CATCTGCAATCATCCCATAGAAGATGCAGCGGCCTGCGGGCAGCCGGTCGCTGGTGCCACTCAGCGTCTTaGTGCCTGCCACGTAGGCCG +
Preference number: 4 (lower is better)
Translates to: HLQSSHRRCSGLRAAGRWCHSAS*CLPRRP
Trigger: CGGCCTACGTGGCAGGCACCAAGACGCTGAGTGGCA...CCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR TCA 90 bp CTGGGCGTCCCGTCTGAGGTGGGGATGACCAACATGCCAGCTCTGGGTTTTAGCTGTCCACACTCCCTGTaGCTGGTCCCCTTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: LGVPSEVGMTNMPALGFSCPHSL*LVPFLP
Trigger: CGGCAGGAAGGGGACCAGTCACAGGGAGTGTGGACA...GCTAAAACCCAGAGCTGGCATGTTGGTCATCCCCACCTCAGACGGGACGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp CCGGAGCCAAGGCGAGTCCTGCTGGGTGCACGTTTATCCCAGCCACCGCCTCCACAGAAAGCAAACCCCTaGCTGTCCACACTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PEPRRVLLGARLSQPPPPQKANP*LSTLPV
Trigger: CACAGGGAGTGTGGACAGTCAGGGGTTTGCTTTCTG...TGGAGGCGGTGGCTGGGATAAACGTGCACCCAGCAGGACTCGCCTTGGCTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp ACCAAGGATGGTGCCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCCAGCCCGAGGACCCCTaGCCCATGGGGACCACCACT +
Preference number: 4 (lower is better)
Translates to: TKDGATCEHKQNPEPRRVQPEDP*PMGTTT
Trigger: AGTGGTGGTCCCCATGGGGCAGGGGTCCTCGGGCTG...GACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CCACGCTGCACACCCCAACTCAGGAGCAGAAAGCAAACCCCTGACTGTCCACACGGGCCAGCGTCACGATaGGGACATTGTCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: PRCTPQLRSRKQTPDCPHGPASR*GHCPGA
Trigger: GGCCCCTGGACAATGTCCGCATCGTGACGCTGGCCC...GTGTGGACAGTCAGGGGTTTGCTTTCTGCTCCTGAGTTGGGGTGTGCAGCGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp AGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGAGGTCAGCCACTGAGTaGCCTAGGGACACGCAGATG +
Preference number: 4 (lower is better)
Translates to: RSGSTSVACFPGLPLGLVRSATE*PRDTQM
Trigger: CATCTGCGTGTCCCTAGGGCACTCAGTGGCTGACCT...CACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CCGGACACAGACGTCCATTGGGGCTATGCTGCCACTCAGCGTCTTGGTGCCTGCTCATCCCATAGAAGATaGAGCGGCCTGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PDTDVHWGYAATQRLGACSSHRR*SGLRAA
Trigger: GGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGA...GCAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp ACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCGCGGCGGGGTTGGTGTaGGTGCCATCTGCAATCATC +
Preference number: 4 (lower is better)
Translates to: TPLRRSGSTSVACFPGLPAAGLV*VPSAII
Trigger: GATGATTGCAGATGGCACGCACACCAACCCCGCCGC...GGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp ACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGCGGCGGGGTTGGTGTaGGTGCCATCTGCAATCATC +
Preference number: 4 (lower is better)
Translates to: TSQEVRIHIRRLLSWAAPAAGLV*VPSAII
Trigger: GATGATTGCAGATGGCACGCACACCAACCCCGCCGC...AGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp AGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACAGTCAGGGCGCTCACCTaGCACGTAGGCCGTCAGACC +
Preference number: 4 (lower is better)
Translates to: RQRWVSLHLTPLRRSGSTVRALT*HVGRQT
Trigger: GGTCTGACGGCCTACGTGGCAGGTGAGCGCCCTGAC...TGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp AGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTCACTCAGCGTCTTGGTaGCTTGAGAGCAGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: RRSGSTSVACFPGLPLGLHSASW*LESREG
Trigger: GCCCTCTCTGCTCTCAAGGCACCAAGACGCTGAGTG...AAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp AGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGCCTGCAGGAAGTaGCGGACACAGACGTCCATT +
Preference number: 4 (lower is better)
Translates to: RRSGSTSVACFPGLPLGLVACRK*RTQTSI
Trigger: AATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCAC...AAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp AGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACAGGGCCGACTCCATGCTaGAGCCTGTGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RQRWVSLHLTPLRRSGSTGPTPC*SLWPAG
Trigger: TCCTGCAGGCCACAGGCTGCAGCATGGAGTCGGCCC...TGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp ACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCGCGAGTCCTGCTGGGTaGACGTTTATCCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: TPLRRSGSTSVACFPGLPASPAG*TFIPAT
Trigger: GGTGGCTGGGATAAACGTGCACCCAGCAGGACTCGC...GGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGCCAAGGCGAGTCCTaGTGGGTGCACGTTTATCCC +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVSQGES*WVHVYP
Trigger: GGGATAAACGTGCACCCAGCAGGACTCGCCTTGGCT...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGAGCCAAGGCGAGTCCTaGTGGGTGCACGTTTATCCC +
Preference number: 4 (lower is better)
Translates to: LSGGQDPHPSPAFLGCPWSQGES*WVHVYP
Trigger: GGGATAAACGTGCACCCAGCAGGACTCGCCTTGGCT...CCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTGACTGGTCCCCTTCCTaGCGGCTCTTCACCCCCAGC +
Preference number: 4 (lower is better)
Translates to: EVGIPAPHTSQEVRIHIRDWSPS*RLFTPS
Trigger: GCTGGGGGTGAAGAGCCGGCAGGAAGGGGACCAGTC...ACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp ACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTAGCAGGGCACACTGGTaGCTCCCATACTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: TSQEVRIHIRRLLSWAAPSRAHW*LPYCPP
Trigger: TGGAGGGCAGTATGGGAGGCACCAGTGTGCCCTGCT...AGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCACTCACGGCCCGTGTTTaGCACATGGGTGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RPSRQRWVSLHLTPLRRSLTARV*HMGVCQ
Trigger: CTGGCACACACCCATGTGGCAAACACGGGCCGTGAG...TGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGTCCACATCCGTCGCCTaGTTTCCTGGGCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: GGYPCTSHLSGGQDPHPSSTSVA*FPGLPL
Trigger: CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGA...CGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp TCTGCCGCCCGCAGGTCAGCCACTGAGTGCCCTAGGGACACGCAGATGCCACGGAAAGAACAGCTTCTCTaGGTCCAAGATGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SAARRSATECPRDTQMPRKEQLL*VQDAAS
Trigger: GGAGGCCGCATCTTGGACCCAGAGAAGCTGTTCTTT...CCGTGGCATCTGCGTGTCCCTAGGGCACTCAGTGGCTGACCTGCGGGCGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp TGGGGCCCAAGGCCCAGGCTAAACTACAGCCCAGCCATCCCACCCCAGGCCGTGAACCCACGTCCTCCGTaGCTTGAGAGAAGTCAACAC +
Preference number: 4 (lower is better)
Translates to: WGPRPRLNYSPAIPPQAVNPRPP*LERSQH
Trigger: GTGTTGACTTCTCTCAAGCCACGGAGGACGTGGGTT...CACGGCCTGGGGTGGGATGGCTGGGCTGTAGTTTAGCCTGGGCCTTGGGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGATAAACCTCCGGTaGGGAAGTGACCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RRSGSTSVACFPGLPLGLVINLR*GSDQGG
Trigger: CCCACCCTGGTCACTTCCCCACCGGAGGTTTATCAC...AAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCCAGGGGCCCGTAGGTaGCCAGCAAGTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: EVGIPAPHTSQEVRIHIRPGARR*PASPGR
Trigger: CCTTCCAGGACTTGCTGGCCACCTACGGGCCCCTGG...ACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCCAGGGGCCCGTAGGTaGCCAGCAAGTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: VKAEVGIPAPHTSQEVRIPGARR*PASPGR
Trigger: CCTTCCAGGACTTGCTGGCCACCTACGGGCCCCTGG...GATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp TCTTGGTGCCTGCCACGTAGGCCGTCAGACCGTCCACTTCCACTTCCTGCTGTCGCCCGGATCACTTCGTaGCTACGGCCCAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: SWCLPRRPSDRPLPLPAVARITS*LRPNSG
Trigger: CCCAGAGTTGGGCCGTAGCCACGAAGTGATCCGGGC...GACAGCAGGAAGTGGAAGTGGACGGTCTGACGGCCTACGTGGCAGGCACCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp GGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGATGGCGTTGAAGAGGTaGGTGATGAAGGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GARPSRQRWVSLHLTPLRMALKR*VMKVAP
Trigger: CGGAGCCACCTTCATCACCCACCTCTTCAACGCCAT...CCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGATGCCTGGGTCGCGGTaGTGGAAAGGCAGCATGGCG +
Preference number: 4 (lower is better)
Translates to: HLTPLRRSGSTSVACFPGMPGSR*WKGSMA
Trigger: CGCCATGCTGCCTTTCCACCACCGCGACCCAGGCAT...CCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCAGAGCCCCACGATGCCTaGGTCGCGGTGGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: QGRGGYPCTSHLSGGQDPEPHDA*VAVVER
Trigger: CCTTTCCACCACCGCGACCCAGGCATCGTGGGGCTC...TGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp ACCAAGGATGGTGCCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCATGCGGGCTGGGACCTaGGACCCAGTGGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: TKDGATCEHKQNPEPRRVMRAGT*DPVGQG
Trigger: GCCCTGACCCACTGGGTCCCAGGTCCCAGCCCGCAT...GACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCCTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302956.8
CDS-3UTR CCA 90 bp GGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCATGCTGCAGCCTGTaGCCTGCAGGAAGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: GGYPCTSHLSGGQDPHPSPCCSL*PAGSAG
Trigger: TCCGGCACTTCCTGCAGGCCACAGGCTGCAGCATGG...CGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CCA 90 bp TCTTGGTGCCTGCCACGTAGGCCGTCAGACCGTCCACTTCCACTTCCTGCTGTCCCATGCTGCAGCCTGTaGCCTGCAGGAAGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: SWCLPRRPSDRPLPLPAVPCCSL*PAGSAG
Trigger: TCCGGCACTTCCTGCAGGCCACAGGCTGCAGCATGG...GACAGCAGGAAGTGGAAGTGGACGGTCTGACGGCCTACGTGGCAGGCACCAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp CCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGCACCCGAGATGTAGGTaGCCTGGACGTGAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: PLRRSGSTSVACFPGLPLHPRCR*PGREGS
Trigger: ACTCCCTTCACGTCCAGGCCACCTACATCTCGGGTG...CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCTCCCGACTCACTCCCTaGAGACCAGCTCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: HTSQEVRIHIRRLLSWAASRLTP*RPAPQP
Trigger: TGGTTGGGGAGCTGGTCTCCAGGGAGTGAGTCGGGA...GGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp AAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAAGGCGAGTCCTGCTaGGTGCACGTTTATCCCAGC +
Preference number: 4 (lower is better)
Translates to: KGCAAVKAEVGIPAPHTSQGESC*VHVYPS
Trigger: GCTGGGATAAACGTGCACCCAGCAGGACTCGCCTTG...AGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGGTGGCTTCACCCCATaGCACCAGCCACTGACTGCC +
Preference number: 4 (lower is better)
Translates to: APHTSQEVRIHIRRLLSWGGFTP*HQPLTA
Trigger: GGCAGTCAGTGGCTGGTGCCATGGGGTGAAGCCACC...CCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCACCCCCAGCCCATGGTaGCTTCACCCCATGGCACCA +
Preference number: 4 (lower is better)
Translates to: PCTSHLSGGQDPHPSPAFTPSPW*LHPMAP
Trigger: TGGTGCCATGGGGTGAAGCCACCATGGGCTGGGGGT...GAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp ACAGCCAGCAAGCTGGGCACAGGCGATGCTCAACCTCTAACACATCGGCTGAGAGCCCAGTCTCCCTCCTaGAGGTCAGAGCGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: TASKLGTGDAQPLTHRLRAQSPS*RSERSP
Trigger: GGGGCTCCGCTCTGACCTCCAGGAGGGAGACTGGGC...TCTCAGCCGATGTGTTAGAGGTTGAGCATCGCCTGTGCCCAGCTTGCTGGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGGAGAAAACAGAACGCTaGTCATCCGTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSREKTER*SSVALR
Trigger: CCTGAGTGCCACGGATGACCAGCGTTCTGTTTTCTC...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGGGACACAGAAGATaGCAGGATGACACTAATGGG +
Preference number: 4 (lower is better)
Translates to: AQHRQALDSHFLRGARPSRGHRR*QDDTNG
Trigger: CCCATTAGTGTCATCCTGCCATCTTCTGTGTCCCCT...TGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGCAGGTGGTTCTTCCCTaGCTGTTCCCTTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: ARPSRQRWVSLHLTPLRRQVVLP*LFPSNR
Trigger: CCTGTTGGAAGGGAACAGCCAGGGAAGAACCACCTG...CCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCCCGTCAAGGCAGAGGTaGGTATCCCTGCACCTCACA +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVPSRQR*VSLHLT
Trigger: TGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGG...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCTCACCAGCTCTGGACTaGGCGTCCCGTCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VGIPAPHTSQEVRIHIRRSPALD*ASRLRW
Trigger: CCACCTCAGACGGGACGCCCAGTCCAGAGCTGGTGA...GCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
3UTR CAA 72 bp CTGTGGCCTGCAGGAAGTGCCGGACACAGACGTCCATaGGGGCTATGCTGCCACTCAGCGTCTTGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: LWPAGSAGHRRP*GLCCHSASWCL
Trigger: CAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR TCA 90 bp ACAGCCAGCAAGCTGGGCACAGGCGATGCTCAACCTCTAACACATCGGCTGAGATGGGGCAGAAGGAGGTaGCGCCGTGCGACAGGATCC +
Preference number: 4 (lower is better)
Translates to: TASKLGTGDAQPLTHRLRWGRRR*RRATGS
Trigger: GGATCCTGTCGCACGGCGTCACCTCCTTCTGCCCCA...TCTCAGCCGATGTGTTAGAGGTTGAGCATCGCCTGTGCCCAGCTTGCTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCGGATGGTGCCACATGTaGGCACAAGCAAAACCCGGA +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVGWCHM*AQAKPG
Trigger: TCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCC...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp ACCAAGGATGGTGCCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCTCCCACCCCAGGCCGTaGATGCCTTCTCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: TKDGATCEHKQNPEPRRVSHPRP*MPSPGG
Trigger: CCCTCCTGGAGAAGGCATTCACGGCCTGGGGTGGGA...GACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp CCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGCAGAAAGCAAACCCCTaGCTGTCCACACTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: PLRRSGSTSVACFPGLPLQKANP*LSTLPV
Trigger: CACAGGGAGTGTGGACAGTCAGGGGTTTGCTTTCTG...CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp GCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGGGGCCTGGGGATGTGTaGAGAGATAGGGTTATTGAG +
Preference number: 4 (lower is better)
Translates to: ARPSRQRWVSLHLTPLRRGPGDV*RDRVIE
Trigger: CTCAATAACCCTATCTCTTCACACATCCCCAGGCCC...CCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp GTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAAGCAGGGCCTGGGGATGTGTaGAGAGATAGGGTTATTGAG +
Preference number: 4 (lower is better)
Translates to: VPPILPSSTRQGHHSRQAGPGDV*RDRVIE
Trigger: CTCAATAACCCTATCTCTTCACACATCCCCAGGCCC...TGCTTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp CTTCATGCAGACAGGCCCTGTCCCCCACTGGGGCCCAAGGCCCAGGCTAAACTAATGACACTAATGGGGTaGGCAGGGCACACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LHADRPCPPLGPKAQAKLMTLMG*AGHTGA
Trigger: GGCACCAGTGTGCCCTGCTCACCCCATTAGTGTCAT...TAGTTTAGCCTGGGCCTTGGGCCCCAGTGGGGGACAGGGCCTGTCTGCATGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp GGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGCAAGACAATCACCCCTaGCGTGGGGCTGCACCAATC +
Preference number: 4 (lower is better)
Translates to: GRQGRGGYPCTSHLSGGQQDNHP*RGAAPI
Trigger: GATTGGTGCAGCCCCACGTCAGGGGTGATTGTCTTG...CTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp GTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAAGCAGCTCTGGGTTTTAGCTaGGGATGGGCACATCAAGCA +
Preference number: 4 (lower is better)
Translates to: VPPILPSSTRQGHHSRQAALGFS*GWAHQA
Trigger: TGCTTGATGTGCCCATCCTCAGCTAAAACCCAGAGC...TGCTTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp AGGGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAAATCCGGGAGCCAAGATaGGGCCCCCGCAGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: RGKGATHPRTQMERKSRQIREPR*GPRSPA
Trigger: GGCGGGACTGCGGGGGCCGCATCTTGGCTCCCGGAT...TTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp TTCCAACAGGTGGGGCCCAGACCATCCTATCTCTTTGGACCTGGAGACATTTCCATCCGGGAGCCAAGATaGGGCCCCCGCAGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: FQQVGPRPSYLFGPGDISIREPR*GPRSPA
Trigger: GGCGGGACTGCGGGGGCCGCATCTTGGCTCCCGGAT...GGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTCTGGGCCCCACCTGTTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAAGGTCAGCCACTGAGTaGCCTAGGGACACGCAGATG +
Preference number: 4 (lower is better)
Translates to: RPSRQRWVSLHLTPLRRSRSATE*PRDTQM
Trigger: CATCTGCGTGTCCCTAGGGCACTCAGTGGCTGACCT...TGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp AGCCTGTGGCCTGCAGGAAGTGCCGGACACAGACGTCCATTGGGGCTATGCTGCAGGTCAGCCACTGAGTaGCCTAGGGACACGCAGATG +
Preference number: 4 (lower is better)
Translates to: SLWPAGSAGHRRPLGLCCRSATE*PRDTQM
Trigger: CATCTGCGTGTCCCTAGGGCACTCAGTGGCTGACCT...GCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCACAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp GTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCTCCACTTCCACTTCCTaGTGTCCCAGCGTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: VGIPAPHTSQEVRIHIRRSTSTS*CPSVCR
Trigger: CCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGGA...GCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCACTCAGCGTCTTGGTaGCTTGAGAGCAGAGAGGGC +
Preference number: 4 (lower is better)
Translates to: HTSQEVRIHIRRLLSWAAHSASW*LESREG
Trigger: GCCCTCTCTGCTCTCAAGGCACCAAGACGCTGAGTG...GGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp ACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTCCATTGGGGCTATGCTaGCACTCAGCGTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: TSQEVRIHIRRLLSWAAPPLGLC*HSASWC
Trigger: GCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGG...AGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp TTCCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACGTCCATTGGGGCTATaGTGCCACTCAGCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: FLRGARPSRQRWVSLHLTRPLGL*CHSASW
Trigger: CCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACG...TGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp CGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCACACTTTCCTGGGGTCTaGAGGTCTCCGGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: RPSRQRWVSLHLTPLRRSHFPGV*RSPVHF
Trigger: GAAGTGGACCGGAGACCTGCAGACCCCAGGAAAGTG...TGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp ACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCACTTTCCTGGGGTCTaGAGGTCTCCGGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: TPLRRSGSTSVACFPGLPHFPGV*RSPVHF
Trigger: GAAGTGGACCGGAGACCTGCAGACCCCAGGAAAGTG...GGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CCACGCTGCACACCCCAACTCAGGAGCAGAAAGCAAACCCCTGACTGTCCACACTGGTGCCTCCCATACTaGCCTCCAGCACCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: PRCTPQLRSRKQTPDCPHWCLPY*PPAPGR
Trigger: CCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCA...GTGTGGACAGTCAGGGGTTTGCTTTCTGCTCCTGAGTTGGGGTGTGCAGCGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCTGGTGCCTCCCATACTaGCCTCCAGCACCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VKAEVGIPAPHTSQEVRIWCLPY*PPAPGR
Trigger: CCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCA...GATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp ACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCACATGGGTGTGTaGCAGGGCCAAGGGGACACA +
Preference number: 4 (lower is better)
Translates to: TSHLSGGQDPHPSPAFLGCHMGV*QGQGDT
Trigger: TGTGTCCCCTTGGCCCTGGCACACACCCATGTGGCA...GCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCTCACGGCCCGTGTTTaGCACATGGGTGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: GGYPCTSHLSGGQDPHPSLTARV*HMGVCQ
Trigger: CTGGCACACACCCATGTGGCAAACACGGGCCGTGAG...CGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp AGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGACCTCAAAATCATCCTaGAGCAGCTCCCTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RSGSTSVACFPGLPLGLVTSKSS*SSSLAQ
Trigger: CTGGGCCAGGGAGCTGCTGCAGGATGATTTTGAGGT...CACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293971.11
ENST00000302956.8
CDS-3UTR CCA 90 bp GTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAAGCAAACCCACGTCCTCCGTaGCTTGAGAGAAGTCAACAC +
Preference number: 4 (lower is better)
Translates to: VPPILPSSTRQGHHSRQANPRPP*LERSQH
Trigger: GTGTTGACTTCTCTCAAGCCACGGAGGACGTGGGTT...TGCTTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CACACAGCATCCTCTGCCGCCCGCAGGTCAGCCACTGAGTGCCCTAGGGACACGAACCCACGTCCTCCGTaGCTTGAGAGAAGTCAACAC +
Preference number: 4 (lower is better)
Translates to: HTASSAARRSATECPRDTNPRPP*LERSQH
Trigger: GTGTTGACTTCTCTCAAGCCACGGAGGACGTGGGTT...CGTGTCCCTAGGGCACTCAGTGGCTGACCTGCGGGCGGCAGAGGATGCTGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp GTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCGTGGCCAGCAAGTCCTaGAAGGCATCGGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: VGIPAPHTSQEVRIHIRRVASKS*KASASK
Trigger: CTTCGAGGCCGATGCCTTCCAGGACTTGCTGGCCAC...GCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCATGGCGTTGAAGAGGTaGGTGATGAAGGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVMALKR*VMKVAP
Trigger: CGGAGCCACCTTCATCACCCACCTCTTCAACGCCAT...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCAATGCCTGGGTCGCGGTaGTGGAAAGGCAGCATGGCG +
Preference number: 4 (lower is better)
Translates to: QGRGGYPCTSHLSGGQDPMPGSR*WKGSMA
Trigger: CGCCATGCTGCCTTTCCACCACCGCGACCCAGGCAT...TGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp ACCAAGGATGGTGCCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCGCAGGGCGGCGGGGTTaGTGTGCGTGCCATCTGCAA +
Preference number: 4 (lower is better)
Translates to: TKDGATCEHKQNPEPRRVAGRRG*CACHLQ
Trigger: TTGCAGATGGCACGCACACCAACCCCGCCGCCCTGC...GACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCCATGCTGCAGCCTGTaGCCTGCAGGAAGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: VKAEVGIPAPHTSQEVRIPCCSL*PAGSAG
Trigger: TCCGGCACTTCCTGCAGGCCACAGGCTGCAGCATGG...GATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CCA 90 bp CCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCATAGTGACACTTTCCTaGGGTCTGCAGGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: PKGCAAVKAEVGIPAPHTIVTLS*GLQVSG
Trigger: ACCGGAGACCTGCAGACCCCAGGAAAGTGTCACTAT...GGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGTTCACCCCCAGCCCATaGTGGCTTCACCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: GGYPCTSHLSGGQDPHPSFTPSP*WLHPMA
Trigger: TGCCATGGGGTGAAGCCACCATGGGCTGGGGGTGAA...CGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CTTCATGCAGACAGGCCCTGTCCCCCACTGGGGCCCAAGGCCCAGGCTAAACTAAACGCTGGTCATCCGTaGCACTCAGGGCTAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LHADRPCPPLGPKAQAKLNAGHP*HSGLGS
Trigger: ACTGCCTAGCCCTGAGTGCCACGGATGACCAGCGTT...TAGTTTAGCCTGGGCCTTGGGCCCCAGTGGGGGACAGGGCCTGTCTGCATGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGAGAAAACAGAACGCTaGTCATCCGTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: GQDPHPSPAFLGCPWGLWEKTER*SSVALR
Trigger: CCTGAGTGCCACGGATGACCAGCGTTCTGTTTTCTC...CCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CTGGGCGTCCCGTCTGAGGTGGGGATGACCAACATGCCAGCTCTGGGTTTTAGCCCCGTGTTTGCCACATaGGTGTGTGCCAGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LGVPSEVGMTNMPALGFSPVFAT*VCARAK
Trigger: CTTGGCCCTGGCACACACCCATGTGGCAAACACGGG...GCTAAAACCCAGAGCTGGCATGTTGGTCATCCCCACCTCAGACGGGACGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp TCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCGAGGGAAGAGAACAGTaGCAGAGCCAGGCGCGTACC +
Preference number: 4 (lower is better)
Translates to: SHLSGGQDPHPSPAFLGCEGREQ*QSQART
Trigger: GGTACGCGCCTGGCTCTGCCACTGTTCTCTTCCCTC...GCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCACCGTCAAGGCAGAGGTaGGTATCCCTGCACCTCACA +
Preference number: 4 (lower is better)
Translates to: RPSRQRWVSLHLTPLRRSPSRQR*VSLHLT
Trigger: TGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGG...TGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp GCATCCTCTGCCGCCCGCAGGTCAGCCACTGAGTGCCCTAGGGACACGCAGATGACGTCCTCCGTGGCTTaGGAGAAGTCAACACCAAAT +
Preference number: 4 (lower is better)
Translates to: ASSAARRSATECPRDTQMTSSVA*EKSTPN
Trigger: ATTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGT...CATCTGCGTGTCCCTAGGGCACTCAGTGGCTGACCTGCGGGCGGCAGAGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR TCA 90 bp CAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTACGTCCTCCGTGGCTTaGGAGAAGTCAACACCAAAT +
Preference number: 4 (lower is better)
Translates to: QEVRIHIRRLLSWAAPGATSSVA*EKSTPN
Trigger: ATTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGT...AGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp ACCAAGGATGGTGCCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCTGTCCACACTCCCTGTaGCTGGTCCCCTTCCTGCCG +
Preference number: 4 (lower is better)
Translates to: TKDGATCEHKQNPEPRRVCPHSL*LVPFLP
Trigger: CGGCAGGAAGGGGACCAGTCACAGGGAGTGTGGACA...GACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp ACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTCAGAAAGCAAACCCCTaGCTGTCCACACTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TSQEVRIHIRRLLSWAAPQKANP*LSTLPV
Trigger: CACAGGGAGTGTGGACAGTCAGGGGTTTGCTTTCTG...AGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp TGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGGGCCTGGGGATGTGTaGAGAGATAGGGTTATTGAG +
Preference number: 4 (lower is better)
Translates to: CAAVKAEVGIPAPHTSQEGPGDV*RDRVIE
Trigger: CTCAATAACCCTATCTCTTCACACATCCCCAGGCCC...CTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp GTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCCAATCCCTGACGTCTaGCCCCACTGTGGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: VKAEVGIPAPHTSQEVRIPIPDV*PHCGCP
Trigger: AGGACAGCCACAGTGGGGTCAGACGTCAGGGATTGG...GATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp CCACGCTGCACACCCCAACTCAGGAGCAGAAAGCAAACCCCTGACTGTCCACACGGGCACATCAAGCACTaGCAGCCAGCAAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PRCTPQLRSRKQTPDCPHGHIKH*QPASWA
Trigger: TGCCCAGCTTGCTGGCTGTCAGTGCTTGATGTGCCC...GTGTGGACAGTCAGGGGTTTGCTTTCTGCTCCTGAGTTGGGGTGTGCAGCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp CTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGCTCTGGGTTTTAGCTaGGGATGGGCACATCAAGCA +
Preference number: 4 (lower is better)
Translates to: LSGGQDPHPSPAFLGCPWALGFS*GWAHQA
Trigger: TGCTTGATGTGCCCATCCTCAGCTAAAACCCAGAGC...CCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp ACAGCCAGCAAGCTGGGCACAGGCGATGCTCAACCTCTAACACATCGGCTGAGATCTCTGGGTCCAAGATaGGGCCTCCGCGCACCCACA +
Preference number: 4 (lower is better)
Translates to: TASKLGTGDAQPLTHRLRSLGPR*GLRAPT
Trigger: TGTGGGTGCGCGGAGGCCGCATCTTGGACCCAGAGA...TCTCAGCCGATGTGTTAGAGGTTGAGCATCGCCTGTGCCCAGCTTGCTGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CCAAGAGGGCTCCAGAAGCCCACCCGCCTCGAAGCTGTTCAGGGAGCCTCACGGAATCCACCGTTGATCTaGACGTCGATGAATCCGGGA +
Preference number: 4 (lower is better)
Translates to: PRGLQKPTRLEAVQGASRNPPLI*TSMNPG
Trigger: TCCCGGATTCATCGACGTGCAGATCAACGGTGGATT...CCGTGAGGCTCCCTGAACAGCTTCGAGGCGGGTGGGCTTCTGGAGCCCTCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp TCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGCAATCCACCGTTGATCTaGACGTCGATGAATCCGGGA +
Preference number: 4 (lower is better)
Translates to: SGSTSVACFPGLPLGLVGNPPLI*TSMNPG
Trigger: TCCCGGATTCATCGACGTGCAGATCAACGGTGGATT...GCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAATCGAAGATGCAGCGGCCTaGGGGCAGCCGGTCGCTGGT +
Preference number: 4 (lower is better)
Translates to: GEGSHPPQNSNGEKVKTIEDAAA*GQPVAG
Trigger: ACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTC...GATTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTTCATCCCATAGAAGATaGAGCGGCCTGCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: EVGIPAPHTSQEVRIHIRSSHRR*SGLRAA
Trigger: GGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGA...ACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCGCGGCGGGGTTGGTGTaGGTGCCATCTGCAATCATC +
Preference number: 4 (lower is better)
Translates to: VKAEVGIPAPHTSQEVRIAAGLV*VPSAII
Trigger: GATGATTGCAGATGGCACGCACACCAACCCCGCCGC...GATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTTCCACTTCCACTTCCTaGTGTCCCAGCGTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: EVGIPAPHTSQEVRIHIRSTSTS*CPSVCR
Trigger: CCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGGA...ACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp AAGTGCCGGACACAGACGTCCATTGGGGCTATGCTGCCACTCAGCGTCTTGGTGTCCACTTCCACTTCCTaGTGTCCCAGCGTGTGCCGG +
Preference number: 4 (lower is better)
Translates to: KCRTQTSIGAMLPLSVLVSTSTS*CPSVCR
Trigger: CCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGGA...CACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp ATCTGCAATCATCCCATAGAAGATGCAGCGGCCTGCGGGCAGCCGGTCGCTGGTCCATTGGGGCTATGCTaGCACTCAGCGTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: ICNHPIEDAAACGQPVAGPLGLC*HSASWC
Trigger: GCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGG...ACCAGCGACCGGCTGCCCGCAGGCCGCTGCATCTTCTATGGGATGATTGCAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp GCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGCGTCCATTGGGGCTATaGTGCCACTCAGCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: APHTSQEVRIHIRRLLSWRPLGL*CHSASW
Trigger: CCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACG...CCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR GCA 90 bp ACCAAGGATGGTGCCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCCGAGGTCCTTGTCACTaGCTAGCTGCGTCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: TKDGATCEHKQNPEPRRVRGPCH*LAASAC
Trigger: GCAGGCGGACGCAGCTAGGCAGTGACAAGGACCTCG...GACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CCACGCTGCACACCCCAACTCAGGAGCAGAAAGCAAACCCCTGACTGTCCACACCTCACGGCCCGTGTTTaGCACATGGGTGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PRCTPQLRSRKQTPDCPHLTARV*HMGVCQ
Trigger: CTGGCACACACCCATGTGGCAAACACGGGCCGTGAG...GTGTGGACAGTCAGGGGTTTGCTTTCTGCTCCTGAGTTGGGGTGTGCAGCGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp CAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGTCCTTAACTGGGCTTTaGAGCAGAGGGAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: QHRQALDSHFLRGARPSRSLTGL*SRGKRT
Trigger: TGTTCTCTTCCCTCTGCTGCAAAGCCCAGTTAAGGA...CCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GTCCATTGGGGCTATGCTGCCACTCAGCGTCTTGGTGCCTGCCACGTAGGCCGTAAGGGGCCCTCCAGGTaGAGCCCTTGTGATAAACCT +
Preference number: 4 (lower is better)
Translates to: VHWGYAATQRLGACHVGRKGPSR*SPCDKP
Trigger: AGGTTTATCACAAGGGCTGCACCTGGAGGGCCCCTT...ACGGCCTACGTGGCAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CCA 90 bp CTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGAAAGAACAGCTTCTCTaGGTCCAAGATGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSGGQDPHPSPAFLGCPWKEQLL*VQDAAS
Trigger: GGAGGCCGCATCTTGGACCCAGAGAAGCTGTTCTTT...CCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAAAGAACAGCTTCTCTaGGTCCAAGATGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: AAVKAEVGIPAPHTSQEVKEQLL*VQDAAS
Trigger: GGAGGCCGCATCTTGGACCCAGAGAAGCTGTTCTTT...GACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCGTGATAAACCTCCGGTaGGGAAGTGACCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PCTSHLSGGQDPHPSPAFVINLR*GSDQGG
Trigger: CCCACCCTGGTCACTTCCCCACCGGAGGTTTATCAC...GAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CTGGGCGTCCCGTCTGAGGTGGGGATGACCAACATGCCAGCTCTGGGTTTTAGCGTGATAAACCTCCGGTaGGGAAGTGACCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LGVPSEVGMTNMPALGFSVINLR*GSDQGG
Trigger: CCCACCCTGGTCACTTCCCCACCGGAGGTTTATCAC...GCTAAAACCCAGAGCTGGCATGTTGGTCATCCCCACCTCAGACGGGACGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAATGGCGTTGAAGAGGTaGGTGATGAAGGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: RPSRQRWVSLHLTPLRRSMALKR*VMKVAP
Trigger: CGGAGCCACCTTCATCACCCACCTCTTCAACGCCAT...TGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGTGCCACTCAGCGTCTTaGTGCCTTGAGAGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GRQGRGGYPCTSHLSGGQCHSAS*CLESRE
Trigger: CTCTCTGCTCTCAAGGCACCAAGACGCTGAGTGGCA...CTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CCA 90 bp GTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCACCCGAGATGTAGGTaGCCTGGACGTGAAGGGAGT +
Preference number: 4 (lower is better)
Translates to: VGIPAPHTSQEVRIHIRRHPRCR*PGREGS
Trigger: ACTCCCTTCACGTCCAGGCCACCTACATCTCGGGTG...GCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAACGGCCGCACAGGCCCTaGGCATCAATCCAGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RGKGATHPRTQMERKSRQRPHRP*ASIQQG
Trigger: GCCCTGCTGGATTGATGCCCAGGGCCTGTGCGGCCG...TTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGAGAAAACAGAACGCTaGTCATCCGTGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: RRSGSTSVACFPGLPLGLEKTER*SSVALR
Trigger: CCTGAGTGCCACGGATGACCAGCGTTCTGTTTTCTC...AAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCAGAGGGAAGAGAACAGTaGCAGAGCCAGGCGCGTACC +
Preference number: 4 (lower is better)
Translates to: QGRGGYPCTSHLSGGQDPEGREQ*QSQART
Trigger: GGTACGCGCCTGGCTCTGCCACTGTTCTCTTCCCTC...TGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCAGGTGGTTCTTCCCTaGCTGTTCCCTTCCAACAGG +
Preference number: 4 (lower is better)
Translates to: HTSQEVRIHIRRLLSWAAQVVLP*LFPSNR
Trigger: CCTGTTGGAAGGGAACAGCCAGGGAAGAACCACCTG...GGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp AAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATGACACTAATGGGGTaGGCAGGGCACACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: KAEVGIPAPHTSQEVRIHMTLMG*AGHTGA
Trigger: GGCACCAGTGTGCCCTGCTCACCCCATTAGTGTCAT...GTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp CCACGCTGCACACCCCAACTCAGGAGCAGAAAGCAAACCCCTGACTGTCCACACCAAGACAATCACCCCTaGCGTGGGGCTGCACCAATC +
Preference number: 4 (lower is better)
Translates to: PRCTPQLRSRKQTPDCPHQDNHP*RGAAPI
Trigger: GATTGGTGCAGCCCCACGTCAGGGGTGATTGTCTTG...GTGTGGACAGTCAGGGGTTTGCTTTCTGCTCCTGAGTTGGGGTGTGCAGCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp GCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTGCCACATGGGTGTGTGGCTCTGGGTTTTAGCTaGGGATGGGCACATCAAGCA +
Preference number: 4 (lower is better)
Translates to: ASKLFREPHGPCLPHGCVALGFS*GWAHQA
Trigger: TGCTTGATGTGCCCATCCTCAGCTAAAACCCAGAGC...CACACACCCATGTGGCAAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp ACAGCCAGCAAGCTGGGCACAGGCGATGCTCAACCTCTAACACATCGGCTGAGAACTGGGCGTCCCGTCTaGGGTGGGGATGACCAACAT +
Preference number: 4 (lower is better)
Translates to: TASKLGTGDAQPLTHRLRTGRPV*GGDDQH
Trigger: ATGTTGGTCATCCCCACCTCAGACGGGACGCCCAGT...TCTCAGCCGATGTGTTAGAGGTTGAGCATCGCCTGTGCCCAGCTTGCTGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp AGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTAATCCACCGTTGATCTaGACGTCGATGAATCCGGGA +
Preference number: 4 (lower is better)
Translates to: RRSGSTSVACFPGLPLGLNPPLI*TSMNPG
Trigger: TCCCGGATTCATCGACGTGCAGATCAACGGTGGATT...AAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp GTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCGTCCATTGGGGCTATaGTGCCACTCAGCGTCTTGG +
Preference number: 4 (lower is better)
Translates to: VKAEVGIPAPHTSQEVRIRPLGL*CHSASW
Trigger: CCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACG...GATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CCA 90 bp ACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCAAAGAACAGCTTCTCTaGGTCCAAGATGCGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TPLRRSGSTSVACFPGLPKEQLL*VQDAAS
Trigger: GGAGGCCGCATCTTGGACCCAGAGAAGCTGTTCTTT...GGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACAGTGATAAACCTCCGGTaGGGAAGTGACCAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RQRWVSLHLTPLRRSGSTVINLR*GSDQGG
Trigger: CCCACCCTGGTCACTTCCCCACCGGAGGTTTATCAC...TGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp ACAGCCAGCAAGCTGGGCACAGGCGATGCTCAACCTCTAACACATCGGCTGAGAGTGGCCAGCAAGTCCTaGAAGGCATCGGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: TASKLGTGDAQPLTHRLRVASKS*KASASK
Trigger: CTTCGAGGCCGATGCCTTCCAGGACTTGCTGGCCAC...TCTCAGCCGATGTGTTAGAGGTTGAGCATCGCCTGTGCCCAGCTTGCTGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAATCGAGCCCCACGATGCCTaGGTCGCGGTGGTGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GEGSHPPQNSNGEKVKTIEPHDA*VAVVER
Trigger: CCTTTCCACCACCGCGACCCAGGCATCGTGGGGCTC...GATTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAATCCAGCCCCAGCAACTaGGCGGGGTGCAGGGATGCA +
Preference number: 4 (lower is better)
Translates to: RGKGATHPRTQMERKSRQSSPSN*AGCRDA
Trigger: TGCATCCCTGCACCCCGCCCAGTTGCTGGGGCTGGA...TTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp ACCAAGGATGGTGCCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCTCCCGACTCACTCCCTaGAGACCAGCTCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: TKDGATCEHKQNPEPRRVSRLTP*RPAPQP
Trigger: TGGTTGGGGAGCTGGTCTCCAGGGAGTGAGTCGGGA...GACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CTTCATGCAGACAGGCCCTGTCCCCCACTGGGGCCCAAGGCCCAGGCTAAACTAATAGTGACACTTTCCTaGGGTCTGCAGGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: LHADRPCPPLGPKAQAKLIVTLS*GLQVSG
Trigger: ACCGGAGACCTGCAGACCCCAGGAAAGTGTCACTAT...TAGTTTAGCCTGGGCCTTGGGCCCCAGTGGGGGACAGGGCCTGTCTGCATGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp ACAGCCAGCAAGCTGGGCACAGGCGATGCTCAACCTCTAACACATCGGCTGAGATTCACCCCCAGCCCATaGTGGCTTCACCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: TASKLGTGDAQPLTHRLRFTPSP*WLHPMA
Trigger: TGCCATGGGGTGAAGCCACCATGGGCTGGGGGTGAA...TCTCAGCCGATGTGTTAGAGGTTGAGCATCGCCTGTGCCCAGCTTGCTGGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp TGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGAGGGGACACAGAAGATaGCAGGATGACACTAATGGG +
Preference number: 4 (lower is better)
Translates to: CAAVKAEVGIPAPHTSQERGHRR*QDDTNG
Trigger: CCCATTAGTGTCATCCTGCCATCTTCTGTGTCCCCT...CTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACACCGTCAAGGCAGAGGTaGGTATCCCTGCACCTCACA +
Preference number: 4 (lower is better)
Translates to: RQRWVSLHLTPLRRSGSTPSRQR*VSLHLT
Trigger: TGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGG...TGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp TTCCAACAGGTGGGGCCCAGACCATCCTATCTCTTTGGACCTGGAGACATTTCCCCTGCCTGGGAGCCCTaGCAAGACAGCTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: FQQVGPRPSYLFGPGDISPAWEP*QDSSSP
Trigger: GGGAGAGGAGCTGTCTTGCCAGGGCTCCCAGGCAGG...GGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTCTGGGCCCCACCTGTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp ACCAAGGATGGTGCCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCCCAGGGCTAGCCCTGTaGACCAACCATCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TKDGATCEHKQNPEPRRVPGLAL*TNHLCQ
Trigger: CTGGCAGAGATGGTTGGTCCACAGGGCTAGCCCTGG...GACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCCTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000293971.11
ENST00000302956.8
CDS-3UTR TCA 90 bp CACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCACGTCCTCCGTGGCTTaGGAGAAGTCAACACCAAAT +
Preference number: 4 (lower is better)
Translates to: HTSQEVRIHIRRLLSWAATSSVA*EKSTPN
Trigger: ATTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGT...GGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp GCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTGCCACATGGGTGTGTGACGTCCTCCGTGGCTTaGGAGAAGTCAACACCAAAT +
Preference number: 4 (lower is better)
Translates to: ASKLFREPHGPCLPHGCVTSSVA*EKSTPN
Trigger: ATTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGT...CACACACCCATGTGGCAAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp GTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCGGATGGTGCCACATGTaGGCACAAGCAAAACCCGGA +
Preference number: 4 (lower is better)
Translates to: VKAEVGIPAPHTSQEVRIGWCHM*AQAKPG
Trigger: TCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCC...GATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp CAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCAGGATGGTGCCACATGTaGGCACAAGCAAAACCCGGA +
Preference number: 4 (lower is better)
Translates to: QGRGGYPCTSHLSGGQDPGWCHM*AQAKPG
Trigger: TCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCC...TGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR TCA 90 bp ACCAAGGATGGTGCCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCATGACACTAATGGGGTaGGCAGGGCACACTGGTGCC +
Preference number: 4 (lower is better)
Translates to: TKDGATCEHKQNPEPRRVMTLMG*AGHTGA
Trigger: GGCACCAGTGTGCCCTGCTCACCCCATTAGTGTCAT...GACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GCCTGCAGGAAGTGCCGGACACAGACGTCCATTGGGGCTATGCTGCCACTCAGCAATCCACCGTTGATCTaGACGTCGATGAATCCGGGA +
Preference number: 4 (lower is better)
Translates to: ACRKCRTQTSIGAMLPLSNPPLI*TSMNPG
Trigger: TCCCGGATTCATCGACGTGCAGATCAACGGTGGATT...GCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR GCA 90 bp AGGGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAACGAGGTCCTTGTCACTaGCTAGCTGCGTCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: RGKGATHPRTQMERKSRQRGPCH*LAASAC
Trigger: GCAGGCGGACGCAGCTAGGCAGTGACAAGGACCTCG...TTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp TGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGTCCTTAACTGGGCTTTaGAGCAGAGGGAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: CAAVKAEVGIPAPHTSQESLTGL*SRGKRT
Trigger: TGTTCTCTTCCCTCTGCTGCAAAGCCCAGTTAAGGA...CTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp TTCCAACAGGTGGGGCCCAGACCATCCTATCTCTTTGGACCTGGAGACATTTCCTCCACATCCGTCGCCTaGTTTCCTGGGCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: FQQVGPRPSYLFGPGDISSTSVA*FPGLPL
Trigger: CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGA...GGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTCTGGGCCCCACCTGTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGAACCCACGTCCTCCGTaGCTTGAGAGAAGTCAACAC +
Preference number: 4 (lower is better)
Translates to: HLTPLRRSGSTSVACFPGNPRPP*LERSQH
Trigger: GTGTTGACTTCTCTCAAGCCACGGAGGACGTGGGTT...CCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp TTCCAACAGGTGGGGCCCAGACCATCCTATCTCTTTGGACCTGGAGACATTTCCGCCCGGATCACTTCGTaGCTACGGCCCAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: FQQVGPRPSYLFGPGDISARITS*LRPNSG
Trigger: CCCAGAGTTGGGCCGTAGCCACGAAGTGATCCGGGC...GGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTCTGGGCCCCACCTGTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCATGGCGTTGAAGAGGTaGGTGATGAAGGTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: VKAEVGIPAPHTSQEVRIMALKR*VMKVAP
Trigger: CGGAGCCACCTTCATCACCCACCTCTTCAACGCCAT...GATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGATAGTGACACTTTCCTaGGGTCTGCAGGTCTCCGGT +
Preference number: 4 (lower is better)
Translates to: GGYPCTSHLSGGQDPHPSIVTLS*GLQVSG
Trigger: ACCGGAGACCTGCAGACCCCAGGAAAGTGTCACTAT...CGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGAGACATTTCCTTAACTaGGCTTTGCAGCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GGQDPHPSPAFLGCPWGLRHFLN*ALQQRE
Trigger: TTCCCTCTGCTGCAAAGCCCAGTTAAGGAAATGTCT...CAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGCTATCTCTTTGGACCTaGAGACATTTCCTTAACTGG +
Preference number: 4 (lower is better)
Translates to: PAQAGAGQPLPKGCAAVKLSLWT*RHFLNW
Trigger: CCAGTTAAGGAAATGTCTCCAGGTCCAAAGAGATAG...CTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp GCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGACGTCCTCCGTGGCTTaGGAGAAGTCAACACCAAAT +
Preference number: 4 (lower is better)
Translates to: APHTSQEVRIHIRRLLSWTSSVA*EKSTPN
Trigger: ATTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGT...CCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp TTCCAACAGGTGGGGCCCAGACCATCCTATCTCTTTGGACCTGGAGACATTTCCACTGGGCGTCCCGTCTaGGGTGGGGATGACCAACAT +
Preference number: 4 (lower is better)
Translates to: FQQVGPRPSYLFGPGDISTGRPV*GGDDQH
Trigger: ATGTTGGTCATCCCCACCTCAGACGGGACGCCCAGT...GGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTCTGGGCCCCACCTGTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp TTCCAACAGGTGGGGCCCAGACCATCCTATCTCTTTGGACCTGGAGACATTTCCTCCCGACTCACTCCCTaGAGACCAGCTCCCCAACCA +
Preference number: 4 (lower is better)
Translates to: FQQVGPRPSYLFGPGDISSRLTP*RPAPQP
Trigger: TGGTTGGGGAGCTGGTCTCCAGGGAGTGAGTCGGGA...GGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTCTGGGCCCCACCTGTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp GGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAATCTTCACCCCCAGCCCATaGTGGCTTCACCCCATGGCA +
Preference number: 4 (lower is better)
Translates to: GEGSHPPQNSNGEKVKTIFTPSP*WLHPMA
Trigger: TGCCATGGGGTGAAGCCACCATGGGCTGGGGGTGAA...GATTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp CCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGACCCCAGAACTCAAATaGAGAGAAAGTCAAGACAAT +
Preference number: 4 (lower is better)
Translates to: PAQAGAGQPLPKGCAAVKTPELK*RESQDN
Trigger: ATTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGT...CTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp AAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTAGACATTTCCTTAACTaGGCTTTGCAGCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: KGCAAVKAEVGIPAPHTSRHFLN*ALQQRE
Trigger: TTCCCTCTGCTGCAAAGCCCAGTTAAGGAAATGTCT...AGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGAGACATTTCCTTAACTaGGCTTTGCAGCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: PLRRSGSTSVACFPGLPLRHFLN*ALQQRE
Trigger: TTCCCTCTGCTGCAAAGCCCAGTTAAGGAAATGTCT...CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp CAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTCTATCTCTTTGGACCTaGAGACATTTCCTTAACTGG +
Preference number: 4 (lower is better)
Translates to: QEVRIHIRRLLSWAAPGALSLWT*RHFLNW
Trigger: CCAGTTAAGGAAATGTCTCCAGGTCCAAAGAGATAG...AGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR TCA 90 bp AGGGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAACAAGACAATCACCCCTaGCGTGGGGCTGCACCAATC +
Preference number: 4 (lower is better)
Translates to: RGKGATHPRTQMERKSRQQDNHP*RGAAPI
Trigger: GATTGGTGCAGCCCCACGTCAGGGGTGATTGTCTTG...TTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAATCCCATTGGGGCTATGCTaGCACTCAGCGTCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: GEGSHPPQNSNGEKVKTIPLGLC*HSASWC
Trigger: GCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGG...GATTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000293971.11
ENST00000302956.8
CDS-3UTR CCA 90 bp GGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGACCCCAGAACTCAAATaGAGAGAAAGTCAAGACAAT +
Preference number: 4 (lower is better)
Translates to: GQDPHPSPAFLGCPWGLWTPELK*RESQDN
Trigger: ATTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGT...CCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTACCATCCTATCTCTTTaGACCTGGAGACATTTCCTT +
Preference number: 4 (lower is better)
Translates to: RRSGSTSVACFPGLPLGLTILSL*TWRHFL
Trigger: AAGGAAATGTCTCCAGGTCCAAAGAGATAGGATGGT...AAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp CCACGCTGCACACCCCAACTCAGGAGCAGAAAGCAAACCCCTGACTGTCCACACTCCTTAACTGGGCTTTaGAGCAGAGGGAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: PRCTPQLRSRKQTPDCPHSLTGL*SRGKRT
Trigger: TGTTCTCTTCCCTCTGCTGCAAAGCCCAGTTAAGGA...GTGTGGACAGTCAGGGGTTTGCTTTCTGCTCCTGAGTTGGGGTGTGCAGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp TGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGACCCCAGAACTCAAATaGAGAGAAAGTCAAGACAAT +
Preference number: 4 (lower is better)
Translates to: CAAVKAEVGIPAPHTSQETPELK*RESQDN
Trigger: ATTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGT...CTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp AGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGACCCCAGAACTCAAATaGAGAGAAAGTCAAGACAAT +
Preference number: 4 (lower is better)
Translates to: RSGSTSVACFPGLPLGLVTPELK*RESQDN
Trigger: ATTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGT...CACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp AAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACAGACATTTCCTTAACTaGGCTTTGCAGCAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: KAEVGIPAPHTSQEVRIHRHFLN*ALQQRE
Trigger: TTCCCTCTGCTGCAAAGCCCAGTTAAGGAAATGTCT...GTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp GTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTATCTCTTTGGACCTaGAGACATTTCCTTAACTGG +
Preference number: 4 (lower is better)
Translates to: VGIPAPHTSQEVRIHIRRLSLWT*RHFLNW
Trigger: CCAGTTAAGGAAATGTCTCCAGGTCCAAAGAGATAG...GCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CCA 90 bp ACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCACCATCCTATCTCTTTaGACCTGGAGACATTTCCTT +
Preference number: 4 (lower is better)
Translates to: TSHLSGGQDPHPSPAFLGTILSL*TWRHFL
Trigger: AAGGAAATGTCTCCAGGTCCAAAGAGATAGGATGGT...GCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp ACCAAGGATGGTGCCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCAAAACCAACCAAGAGTaGTTCCCCCACACCTCAAAA +
Preference number: 4 (lower is better)
Translates to: TKDGATCEHKQNPEPRRVKTNQE*FPHTSK
Trigger: TTTTGAGGTGTGGGGGAAGCACTCTTGGTTGGTTTT...GACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCCTTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293971.11
ENST00000302956.8
CDS-3UTR CCA 90 bp GAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTACCATCCTATCTCTTTaGACCTGGAGACATTTCCTT +
Preference number: 4 (lower is better)
Translates to: EVGIPAPHTSQEVRIHIRTILSL*TWRHFL
Trigger: AAGGAAATGTCTCCAGGTCCAAAGAGATAGGATGGT...ACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR GCA 90 bp TTCCAACAGGTGGGGCCCAGACCATCCTATCTCTTTGGACCTGGAGACATTTCCTCCTTAACTGGGCTTTaGAGCAGAGGGAAGAGAACA +
Preference number: 4 (lower is better)
Translates to: FQQVGPRPSYLFGPGDISSLTGL*SRGKRT
Trigger: TGTTCTCTTCCCTCTGCTGCAAAGCCCAGTTAAGGA...GGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTCTGGGCCCCACCTGTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CCA 90 bp ACCAAGGATGGTGCCACATGTGAGCACAAGCAAAACCCGGAGCCAAGGCGAGTCCTATCTCTTTGGACCTaGAGACATTTCCTTAACTGG +
Preference number: 4 (lower is better)
Translates to: TKDGATCEHKQNPEPRRVLSLWT*RHFLNW
Trigger: CCAGTTAAGGAAATGTCTCCAGGTCCAAAGAGATAG...GACTCGCCTTGGCTCCGGGTTTTGCTTGTGCTCACATGTGGCACCATCCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR GCA 90 bp GGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAATCAAAACCAACCAAGAGTaGTTCCCCCACACCTCAAAA +
Preference number: 4 (lower is better)
Translates to: GEGSHPPQNSNGEKVKTIKTNQE*FPHTSK
Trigger: TTTTGAGGTGTGGGGGAAGCACTCTTGGTTGGTTTT...GATTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000293971.11
ENST00000302956.8
CDS-3UTR CCA 90 bp AGGGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAAACCATCCTATCTCTTTaGACCTGGAGACATTTCCTT +
Preference number: 4 (lower is better)
Translates to: RGKGATHPRTQMERKSRQTILSL*TWRHFL
Trigger: AAGGAAATGTCTCCAGGTCCAAAGAGATAGGATGGT...TTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CAA 90 bp CACCGCCTCCAGGGCGGCCGCACAGGCCCTGGGCATCAATCCAGCAGGGCTCCCCGCAGGGCGGCGGGGTaGGTGTGCGTGCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: HRLQGGRTGPGHQSSRAPRRAAG*VCVPSA
Trigger: TGCAGATGGCACGCACACCAACCCCGCCGCCCTGCG...GGGAGCCCTGCTGGATTGATGCCCAGGGCCTGTGCGGCCGCCCTGGAGGCGGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS CCA 90 bp GGGGTCGTGGGCCACCTGGCATGCGGGCTGGGACCTGGGACCCAGTaGGTCAGGGCGCTCACCTGCCACGTAGGCCGTCAGACCGTCCAC +
Preference number: 5 (lower is better)
Translates to: GVVGHLACGLGPGTQ*VRALTCHVGRQTVH
Trigger: GTGGACGGTCTGACGGCCTACGTGGCAGGTGAGCGCCCTGACCCACTGGGTCCCAGGTCCCAGCCCGCATGCCAGGTGGCCCACGACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302956.8
ENST00000413459.7
ENST00000561487.1
ENST00000563145.1
ENST00000568263.5
ENST00000569879.5
CDS GCA 90 bp AAGCAGGCCCACCCCGAGCCGGCCCCTCACCTAGGGACACGCAGATaGCACGGGCCGTCAGCGCCCGGATCACTTCGTGGCTACGGCCCA +
Preference number: 5 (lower is better)
Translates to: KQAHPEPAPHLGTRR*HGPSAPGSLRGYGP
Trigger: TGGGCCGTAGCCACGAAGTGATCCGGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAGGTGAGGGGCCGGCTCGGGGTGGGCCTGCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000565963.5
ENST00000566947.5
CDS CCA 90 bp GTGGCCAGCAAGTCCTGGAAGGCATCGGCCTCGAAGGAGCGGAGGTaGGCCTCGGGGTGCGCGCCCCGCTTCTCCCGGCTGATGAAGGGG +
Preference number: 5 (lower is better)
Translates to: VASKSWKASASKERR*ASGCAPRFSRLMKG
Trigger: CCCCTTCATCAGCCGGGAGAAGCGGGGCGCGCACCCCGAGGCCCACCTCCGCTCCTTCGAGGCCGATGCCTTCCAGGACTTGCTGGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563633.5
ENST00000565963.5
ENST00000567475.5
ENST00000568263.5
ENST00000569219.1
ENST00000570028.5
ENST00000648227.1
CDS GCA 90 bp CGCAGGTCAGCCACTGAGTGCCCTGCGGGACCTGGATTCAGACTTTaGACCTGGCCCAGGTCCCCCAAGCAGGCCCACCCCGAGCCGGCC +
Preference number: 5 (lower is better)
Translates to: RRSATECPAGPGFRL*TWPRSPKQAHPEPA
Trigger: GGCCGGCTCGGGGTGGGCCTGCTTGGGGGACCTGGGCCAGGTGCAAAGTCTGAATCCAGGTCCCGCAGGGCACTCAGTGGCTGACCTGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566947.5
CDS-3UTR CAA 90 bp CCACTTCCACTTCCTGCTGTCCCAGCGTGTGCCGGCCGTTGCCCAGGCCCAAGGCGCAGGGCGGCGGGGTaGGTGTGCGTGCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: PLPLPAVPACAGRCPGPRRRAAG*VCVPSA
Trigger: TGCAGATGGCACGCACACCAACCCCGCCGCCCTGCG...CCTTGGGCCTGGGCAACGGCCGGCACACGCTGGGACAGCAGGAAGTGGAAGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS TCA 90 bp TGGCAACACGGGGCTACAACTGAGGCTGGCAGCCGGCAGCCCACCTaGGAGGAGGGAGCTAGGGAGGACCCACCCTCCCTGGCCCTGTCC +
Preference number: 5 (lower is better)
Translates to: WQHGATTEAGSRQPT*EEGAREDPPSLALS
Trigger: GGACAGGGCCAGGGAGGGTGGGTCCTCCCTAGCTCCCTCCTCTCAGGTGGGCTGCCGGCTGCCAGCCTCAGTTGTAGCCCCGTGTTGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563453.1
CDS GCA 90 bp CCTGGAGACCAGCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTaGGGCCAGGTGTCCTCTCAGCCGAGGTCCTTGTCACTGCCTAGC +
Preference number: 5 (lower is better)
Translates to: PGDQLPNHPALMASR*GQVSSQPRSLSLPS
Trigger: GCTAGGCAGTGACAAGGACCTCGGCTGAGAGGACACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGCTGGTCTCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000563145.1
ENST00000648227.1
CDS GCA 90 bp CAGGCAGGGCCAGGCTGCCCGGTGACCCTGCGACAGGCCCTCACCTaGGTCAGCACCAAAGTCCAGGGTCCCCTTACTCTTCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: QAGPGCPVTLRQALT*VSTKVQGPLTLLQP
Trigger: GGGCTGGAGAAGAGTAAGGGGACCCTGGACTTTGGTGCTGACGCAGGTGAGGGCCTGTCGCAGGGTCACCGGGCAGCCTGGCCCTGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563453.1
CDS CCA 90 bp CCGCCGCTCGTCGGCCACGCGCCGCTCCTCAAAGAACAGCTTCTCTaGGTCCAAGATGCGGCCTCCGCGCACCCACAGATCCTCCCTGAG +
Preference number: 5 (lower is better)
Translates to: PPLVGHAPLLKEQLL*VQDAASAHPQILPE
Trigger: CTCAGGGAGGATCTGTGGGTGCGCGGAGGCCGCATCTTGGACCCAGAGAAGCTGTTCTTTGAGGAGCGGCGCGTGGCCGACGAGCGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563556.1
ENST00000563633.5
ENST00000565963.5
ENST00000566706.5
ENST00000567475.5
ENST00000569219.1
ENST00000569879.5
ENST00000648227.1
CDS CCA 90 bp ACGGGCCGTCAGCGCCCGGATCACTTCGTGGCTACGGCCCAACTCTaGGGCCAGCGTCACGATGCGGACATTGTCCAGGGGCCCGTAGGT +
Preference number: 5 (lower is better)
Translates to: TGRQRPDHFVATAQL*GQRHDADIVQGPVG
Trigger: ACCTACGGGCCCCTGGACAATGTCCGCATCGTGACGCTGGCCCCAGAGTTGGGCCGTAGCCACGAAGTGATCCGGGCGCTGACGGCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563633.5
ENST00000565963.5
ENST00000567475.5
ENST00000568263.5
ENST00000570028.5
ENST00000648227.1
CDS CCA 90 bp GTGGGCAGAGCTTGGGCTACAGTCCGGGCACCCGGTCCAGCCCCTTaGGGACCCACCACTCACAGACCACCTAAACCCGCACCCGTGCTG +
Preference number: 5 (lower is better)
Translates to: VGRAWATVRAPGPAP*GPTTHRPPKPAPVL
Trigger: CAGCACGGGTGCGGGTTTAGGTGGTCTGTGAGTGGTGGGTCCCCAAGGGGCTGGACCGGGTGCCCGGACTGTAGCCCAAGCTCTGCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561487.1
ENST00000563145.1
CDS-3UTR CAA 90 bp GCTCCCCAACCACCCGGCCCTGATGGCATCCCGCTGCGGCCAGGTGTCCTCTCACAGCGTCTTGGTGCCTaGAGAGCAGAGAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: APQPPGPDGIPLRPGVLSQRLGA*RAERAG
Trigger: GCCTGCCCTCTCTGCTCTCAAGGCACCAAGACGCTG...TGAGAGGACACCTGGCCGCAGCGGGATGCCATCAGGGCCGGGTGGTTGGGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000302956.8
CDS-3UTR CAA 90 bp CCGGAGCCAAGGCGAGTCCTGCTGGGTGCACGTTTATCCCAGCCACCGCCTCCAGGCTGCCCCTGGGGCTaGTGGGCTGAGATCAACCCC +
Preference number: 5 (lower is better)
Translates to: PEPRRVLLGARLSQPPPPGCPWG*WAEINP
Trigger: GGGGTTGATCTCAGCCCACAAGCCCCAGGGGCAGCC...TGGAGGCGGTGGCTGGGATAAACGTGCACCCAGCAGGACTCGCCTTGGCTCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CAA 90 bp CTGGTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAAGGCTGCCCCTGGGGCTaGTGGGCTGAGATCAACCCC +
Preference number: 5 (lower is better)
Translates to: LVPPILPSSTRQGHHSRQGCPWG*WAEINP
Trigger: GGGGTTGATCTCAGCCCACAAGCCCCAGGGGCAGCC...TTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS TCA 90 bp GGCTCCGCTCCACACAGCATCCTCTGCCGCCCGCAGGTCAGCCACTaGGTGCCCTGCGGGACCTGGATTCAGACTTTGCACCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GSAPHSILCRPQVSH*VPCGTWIQTLHLAQ
Trigger: CTGGGCCAGGTGCAAAGTCTGAATCCAGGTCCCGCAGGGCACTCAGTGGCTGACCTGCGGGCGGCAGAGGATGCTGTGTGGAGCGGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566947.5
CDS GCA 90 bp TCCAGGCCGCCCCAGGAACAACAGAGTCTACAGGCAGGGCCAGGCTaGCCGGTGACCCTGCGACAGGCCCTCACCTGCGTCAGCACCAAA +
Preference number: 5 (lower is better)
Translates to: SRPPQEQQSLQAGPG*PVTLRQALTCVSTK
Trigger: TTTGGTGCTGACGCAGGTGAGGGCCTGTCGCAGGGTCACCGGGCAGCCTGGCCCTGCCTGTAGACTCTGTTGTTCCTGGGGCGGCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563453.1
CDS GCA 90 bp CCGCTCCACACAGCATCCTCTGCCGCCCGCAGGTCAGCCACTGAGTaGCCTGCGGGACCTGGATTCAGACTTTGCACCTGGCCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PLHTASSAARRSATE*PAGPGFRLCTWPRS
Trigger: GGACCTGGGCCAGGTGCAAAGTCTGAATCCAGGTCCCGCAGGGCACTCAGTGGCTGACCTGCGGGCGGCAGAGGATGCTGTGTGGAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566947.5
CDS CCA 90 bp CTGGGGCCAGCGTCACGATGCGGACATTGTCCAGGGGCCCGTAGGTaGCCAGCAAGTCCTGGAAGGCATCGGCCTCGAAGGAGCGGAGGT +
Preference number: 5 (lower is better)
Translates to: LGPASRCGHCPGARR*PASPGRHRPRRSGG
Trigger: ACCTCCGCTCCTTCGAGGCCGATGCCTTCCAGGACTTGCTGGCCACCTACGGGCCCCTGGACAATGTCCGCATCGTGACGCTGGCCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563633.5
ENST00000565963.5
ENST00000567475.5
ENST00000568263.5
ENST00000570028.5
ENST00000648227.1
CDS CCA 90 bp AGGGACACGCAGATGCCACGGGCCGTCAGCGCCCGGATCACTTCGTaGCTACGGCCCAACTCTGGGGCCAGCGTCACGATGCGGACATTG +
Preference number: 5 (lower is better)
Translates to: RDTQMPRAVSARITS*LRPNSGASVTMRTL
Trigger: CAATGTCCGCATCGTGACGCTGGCCCCAGAGTTGGGCCGTAGCCACGAAGTGATCCGGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563633.5
ENST00000565963.5
ENST00000566947.5
ENST00000567475.5
ENST00000568263.5
ENST00000570028.5
ENST00000648227.1
CDS-3UTR CAA 90 bp AAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTGGCTGCCCCTGGGGCTaGTGGGCTGAGATCAACCCC +
Preference number: 5 (lower is better)
Translates to: KGCAAVKAEVGIPAPHTSGCPWG*WAEINP
Trigger: GGGGTTGATCTCAGCCCACAAGCCCCAGGGGCAGCC...AGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS TCA 90 bp GCAACCCCTTGCCTGGCCTTGTCTGCAACACCAGAAAGCCCGGCCTaGTGGCAACACGGGGCTACAACTGAGGCTGGCAGCCGGCAGCCC +
Preference number: 5 (lower is better)
Translates to: ATPCLALSATPESPA*WQHGATTEAGSRQP
Trigger: GGGCTGCCGGCTGCCAGCCTCAGTTGTAGCCCCGTGTTGCCATCAGGCCGGGCTTTCTGGTGTTGCAGACAAGGCCAGGCAAGGGGTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563453.1
CDS GCA 90 bp TGCGGCCAGGTGTCCTCTCAGCCGAGGTCCTTGTCACTGCCTAGCTaGGTCCGCCTGCCACACCAGCTCACCCGAGATGTAGGTGGCCTG +
Preference number: 5 (lower is better)
Translates to: CGQVSSQPRSLSLPS*VRLPHQLTRDVGGL
Trigger: CAGGCCACCTACATCTCGGGTGAGCTGGTGTGGCAGGCGGACGCAGCTAGGCAGTGACAAGGACCTCGGCTGAGAGGACACCTGGCCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000563145.1
ENST00000563444.1
ENST00000648227.1
CDS CCA 90 bp ACCCTGGGCCTGAGTCACCAAGTACCCAATGCCCAGGAGCTCCTGTaGGCAGAGCTTGGGCTACAGTCCGGGCACCCGGTCCAGCCCCTT +
Preference number: 5 (lower is better)
Translates to: TLGLSHQVPNAQELL*AELGLQSGHPVQPL
Trigger: AAGGGGCTGGACCGGGTGCCCGGACTGTAGCCCAAGCTCTGCCCACAGGAGCTCCTGGGCATTGGGTACTTGGTGACTCAGGCCCAGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563145.1
CDS-3UTR CAA 90 bp CCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCGCAGGGCGGCGGGGTaGGTGTGCGTGCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: PCTSHLSGGQDPHPSPAFRRAAG*VCVPSA
Trigger: TGCAGATGGCACGCACACCAACCCCGCCGCCCTGCG...GAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp GCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGCGCAGGGCGGCGGGGTaGGTGTGCGTGCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: APHTSQEVRIHIRRLLSWRRAAG*VCVPSA
Trigger: TGCAGATGGCACGCACACCAACCCCGCCGCCCTGCG...CCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp GGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGCAGCGTCTTGGTGCCTaGAGAGCAGAGAGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: GQDPHPSPAFLGCPWGLWQRLGA*RAERAG
Trigger: GCCTGCCCTCTCTGCTCTCAAGGCACCAAGACGCTG...CCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CAA 90 bp CAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTCCTCACGGCCCGTGTTaGCCACATGGGTGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: QEVRIHIRRLLSWAAPGAPHGPC*PHGCVP
Trigger: TGGCACACACCCATGTGGCAAACACGGGCCGTGAGG...AGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp TGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGCTGAGATCAACCCCTaGTGCCCTGCCCCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: CAAVKAEVGIPAPHTSQEAEINP*CPAPGP
Trigger: AGGGCCTGGGGCAGGGCACAAGGGGTTGATCTCAGC...CTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp GCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTGCCACATGGGTGTGTGGGCTGCCCCTGGGGCTaGTGGGCTGAGATCAACCCC +
Preference number: 5 (lower is better)
Translates to: ASKLFREPHGPCLPHGCVGCPWG*WAEINP
Trigger: GGGGTTGATCTCAGCCCACAAGCCCCAGGGGCAGCC...CACACACCCATGTGGCAAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS GCA 90 bp GGATCACTTCGTGGCTACGGCCCAACTCTGGGGCCAGCGTCACGATaGGGACATTGTCCAGGGGCCCGTAGGTGGCCAGCAAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: GSLRGYGPTLGPASR*GHCPGARRWPASPG
Trigger: TCCAGGACTTGCTGGCCACCTACGGGCCCCTGGACAATGTCCGCATCGTGACGCTGGCCCCAGAGTTGGGCCGTAGCCACGAAGTGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563633.5
ENST00000565963.5
ENST00000567475.5
ENST00000568263.5
ENST00000570028.5
ENST00000648227.1
CDS GCA 90 bp CCCCTTGGGGACCCACCACTCACAGACCACCTAAACCCGCACCCGTaGTGCTCACTGACCTGTGGCCTGCAGGAAGTGCCGGACACAGAC +
Preference number: 5 (lower is better)
Translates to: PLGDPPLTDHLNPHP*CSLTCGLQEVPDTD
Trigger: GTCTGTGTCCGGCACTTCCTGCAGGCCACAGGTCAGTGAGCAGCACGGGTGCGGGTTTAGGTGGTCTGTGAGTGGTGGGTCCCCAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561487.1
ENST00000563145.1
CDS CCA 90 bp GGAGAAGAGGCTCAGAACCTGCTAGCCCAGTCATCCTACCTGTCCTaGCCACCTGCCGCAGCTTACCCTGGGGATGGGCACGGTGGGCGA +
Preference number: 5 (lower is better)
Translates to: GEEAQNLLAQSSYLS*PPAAAYPGDGHGGR
Trigger: TCGCCCACCGTGCCCATCCCCAGGGTAAGCTGCGGCAGGTGGCCAGGACAGGTAGGATGACTGGGCTAGCAGGTTCTGAGCCTCTTCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563444.1
CDS CCA 90 bp GCCCAGGCCCAAGGCAGGGATGGCATCGGTGACCAGCACCAGCCCTaGGGGAGAAGAGGCTCAGAACCTGCTAGCCCAGTCATCCTACCT +
Preference number: 5 (lower is better)
Translates to: AQAQGRDGIGDQHQP*GRRGSEPASPVILP
Trigger: AGGTAGGATGACTGGGCTAGCAGGTTCTGAGCCTCTTCTCCCCCAGGGCTGGTGCTGGTCACCGATGCCATCCCTGCCTTGGGCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563444.1
CDS-3UTR CAA 90 bp CCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGCCGAGGTCCTaGTCACTGCCTAGCTGCGTC +
Preference number: 5 (lower is better)
Translates to: PKGCAAVKAEVGIPAPHTSQPRS*SLPSCV
Trigger: GACGCAGCTAGGCAGTGACAAGGACCTCGGCTGAGA...GGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CAA 90 bp CCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGCCTCACGGCCCGTGTTaGCCACATGGGTGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: PLRRSGSTSVACFPGLPLPHGPC*PHGCVP
Trigger: TGGCACACACCCATGTGGCAAACACGGGCCGTGAGG...CAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp GCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTGCCACATGGGTGTGTGGCTGAGATCAACCCCTaGTGCCCTGCCCCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: ASKLFREPHGPCLPHGCVAEINP*CPAPGP
Trigger: AGGGCCTGGGGCAGGGCACAAGGGGTTGATCTCAGC...CACACACCCATGTGGCAAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS GCA 90 bp CTTGGGGACCCACCACTCACAGACCACCTAAACCCGCACCCGTGCTaGTCACTGACCTGTGGCCTGCAGGAAGTGCCGGACACAGACGTC +
Preference number: 5 (lower is better)
Translates to: LGDPPLTDHLNPHPC*SLTCGLQEVPDTDV
Trigger: GACGTCTGTGTCCGGCACTTCCTGCAGGCCACAGGTCAGTGAGCAGCACGGGTGCGGGTTTAGGTGGTCTGTGAGTGGTGGGTCCCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561487.1
ENST00000563145.1
CDS GCA 90 bp TGCTGGTCTGCCTGTCACCCTGGGCCTGAGTCACCAAGTACCCAATaGCCAGGAGCTCCTGTGGGCAGAGCTTGGGCTACAGTCCGGGCA +
Preference number: 5 (lower is better)
Translates to: CWSACHPGPESPSTQ*PGAPVGRAWATVRA
Trigger: TGCCCGGACTGTAGCCCAAGCTCTGCCCACAGGAGCTCCTGGGCATTGGGTACTTGGTGACTCAGGCCCAGGGTGACAGGCAGACCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563145.1
CDS-3UTR CAA 90 bp CTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGTCTCAGCCGAGGTCCTaGTCACTGCCTAGCTGCGTC +
Preference number: 5 (lower is better)
Translates to: LSGGQDPHPSPAFLGCPWSQPRS*SLPSCV
Trigger: GACGCAGCTAGGCAGTGACAAGGACCTCGGCTGAGA...CCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CAA 90 bp TCACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCGCTGAGATCAACCCCTaGTGCCCTGCCCCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: SHLSGGQDPHPSPAFLGCAEINP*CPAPGP
Trigger: AGGGCCTGGGGCAGGGCACAAGGGGTTGATCTCAGC...GCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS GCA 90 bp TGGCCTGCAGGAAGTGCCGGACACAGACGTCCATTGGGGCTATGCTaGCACTCAGCGTCTTGGTGCCTTGAGAGCAGAGAGGGCAGGCTC +
Preference number: 5 (lower is better)
Translates to: WPAGSAGHRRPLGLC*HSASWCLESREGRL
Trigger: GAGCCTGCCCTCTCTGCTCTCAAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302956.8
ENST00000413459.7
ENST00000561487.1
ENST00000563145.1
ENST00000568263.5
CDS GCA 90 bp CTGTGGCCTGCAGGAAGTGCCGGACACAGACGTCCATTGGGGCTATaGTGCCACTCAGCGTCTTGGTGCCTTGAGAGCAGAGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LWPAGSAGHRRPLGL*CHSASWCLESREGR
Trigger: CCTGCCCTCTCTGCTCTCAAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302956.8
ENST00000413459.7
ENST00000561487.1
ENST00000563145.1
ENST00000568263.5
CDS-3UTR CAA 90 bp GGCCCAGCACAGGCAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCACACCAAATCCACCGTaGATCTGCACGTCGATGAAT +
Preference number: 5 (lower is better)
Translates to: GPAQAGAGQPLPKGCAAVTPNPP*ICTSMN
Trigger: ATTCATCGACGTGCAGATCAACGGTGGATTTGGTGT...GACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTGCCTGTGCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp CAGGCGCTGGACAGCCACTTCCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGAAAGGCAGCATGGCGTaGAAGAGGTGGGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: QALDSHFLRGARPSRQRWKGSMA*KRWVMK
Trigger: CTTCATCACCCACCTCTTCAACGCCATGCTGCCTTT...CCACCTCTGCCTTGACGGCCGCGCACCCCTTAGGAAGTGGCTGTCCAGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp CACGCAGATGCCACGGGCCGTCAGCGCCCGGATCACTTCGTGGCTACGGCCCAAAAAGGCAGCATGGCGTaGAAGAGGTGGGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: HADATGRQRPDHFVATAQKGSMA*KRWVMK
Trigger: CTTCATCACCCACCTCTTCAACGCCATGCTGCCTTT...TTGGGCCGTAGCCACGAAGTGATCCGGGCGCTGACGGCCCGTGGCATCTGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CAA 90 bp AGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGACACAGACGTCCATaGGGGCTATGCTGCCACTCA +
Preference number: 5 (lower is better)
Translates to: RSGSTSVACFPGLPLGLVGHRRP*GLCCHS
Trigger: TGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCC...CACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CAA 90 bp CTGGGCGTCCCGTCTGAGGTGGGGATGACCAACATGCCAGCTCTGGGTTTTAGCCCTCACGGCCCGTGTTaGCCACATGGGTGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: LGVPSEVGMTNMPALGFSPHGPC*PHGCVP
Trigger: TGGCACACACCCATGTGGCAAACACGGGCCGTGAGG...GCTAAAACCCAGAGCTGGCATGTTGGTCATCCCCACCTCAGACGGGACGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CAA 90 bp GTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCGCTGAGATCAACCCCTaGTGCCCTGCCCCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: VKAEVGIPAPHTSQEVRIAEINP*CPAPGP
Trigger: AGGGCCTGGGGCAGGGCACAAGGGGTTGATCTCAGC...GATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS TCA 90 bp CTCCGGGCCACGAGGGCAACCCCCGAACCCACGTCCTCCGTGGCTTaGGAGAAGTCAACACCAAATCCACCGTTGATCTGCACGTCGATG +
Preference number: 5 (lower is better)
Translates to: LRATRATPEPTSSVA*EKSTPNPPLICTSM
Trigger: CATCGACGTGCAGATCAACGGTGGATTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGTGGGTTCGGGGGTTGCCCTCGTGGCCCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563556.1
ENST00000563633.5
ENST00000566706.5
ENST00000567475.5
ENST00000569219.1
ENST00000569879.5
ENST00000648227.1
CDS CCA 90 bp ACTCACAGACCACCTAAACCCGCACCCGTGCTGCTCACTGACCTGTaGCCTGCAGGAAGTGCCGGACACAGACGTCCATTGGGGCTATGC +
Preference number: 5 (lower is better)
Translates to: THRPPKPAPVLLTDL*PAGSAGHRRPLGLC
Trigger: GCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCACAGGTCAGTGAGCAGCACGGGTGCGGGTTTAGGTGGTCTGTGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561487.1
ENST00000563145.1
CDS-3UTR CAA 90 bp GGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGCACGTCCTCCGTGGCTaGAGAGAAGTCAACACCAAA +
Preference number: 5 (lower is better)
Translates to: GARPSRQRWVSLHLTPLRHVLRG*REVNTK
Trigger: TTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGTG...CCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp GCATCCTCTGCCGCCCGCAGGTCAGCCACTGAGTGCCCTAGGGACACGCAGATGCACGTCCTCCGTGGCTaGAGAGAAGTCAACACCAAA +
Preference number: 5 (lower is better)
Translates to: ASSAARRSATECPRDTQMHVLRG*REVNTK
Trigger: TTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGTG...CATCTGCGTGTCCCTAGGGCACTCAGTGGCTGACCTGCGGGCGGCAGAGGATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CAA 90 bp CCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCAAAGGCAGCATGGCGTaGAAGAGGTGGGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: PKGCAAVKAEVGIPAPHTKGSMA*KRWVMK
Trigger: CTTCATCACCCACCTCTTCAACGCCATGCTGCCTTT...GGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp CTGGTGCCTCCCATACTGCCCTCCAGCACCAGGCAGGGTCACCACAGCCGGCAAAAAGGCAGCATGGCGTaGAAGAGGTGGGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: LVPPILPSSTRQGHHSRQKGSMA*KRWVMK
Trigger: CTTCATCACCCACCTCTTCAACGCCATGCTGCCTTT...TTGCCGGCTGTGGTGACCCTGCCTGGTGCTGGAGGGCAGTATGGGAGGCACCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CAA 90 bp TTCCAACAGGTGGGGCCCAGACCATCCTATCTCTTTGGACCTGGAGACATTTCCCGCAGGGCGGCGGGGTaGGTGTGCGTGCCATCTGCA +
Preference number: 5 (lower is better)
Translates to: FQQVGPRPSYLFGPGDISRRAAG*VCVPSA
Trigger: TGCAGATGGCACGCACACCAACCCCGCCGCCCTGCG...GGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTCTGGGCCCCACCTGTTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CAA 90 bp CTTCATGCAGACAGGCCCTGTCCCCCACTGGGGCCCAAGGCCCAGGCTAAACTAGGACACAGACGTCCATaGGGGCTATGCTGCCACTCA +
Preference number: 5 (lower is better)
Translates to: LHADRPCPPLGPKAQAKLGHRRP*GLCCHS
Trigger: TGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCC...TAGTTTAGCCTGGGCCTTGGGCCCCAGTGGGGGACAGGGCCTGTCTGCATGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000293971.11
ENST00000302956.8
CDS-3UTR CAA 90 bp CACACCTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCGGACACAGACGTCCATaGGGGCTATGCTGCCACTCA +
Preference number: 5 (lower is better)
Translates to: HTSQEVRIHIRRLLSWAAGHRRP*GLCCHS
Trigger: TGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCC...GGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
CDS-3UTR CAA 90 bp GCCTGCAGGAAGTGCCGGACACAGACGTCCATTGGGGCTATGCTGCCACTCAGCGGACACAGACGTCCATaGGGGCTATGCTGCCACTCA +
Preference number: 5 (lower is better)
Translates to: ACRKCRTQTSIGAMLPLSGHRRP*GLCCHS
Trigger: TGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCC...GCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CAA 90 bp GAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACATCCGTCCTCACGGCCCGTGTTaGCCACATGGGTGTGTGCCA +
Preference number: 5 (lower is better)
Translates to: EVGIPAPHTSQEVRIHIRPHGPC*PHGCVP
Trigger: TGGCACACACCCATGTGGCAAACACGGGCCGTGAGG...ACGGATGTGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS CCA 90 bp GGCCCAGGGACACGACTAGTGCAAGACACCCTGACCCATCACAGATaGACAGAGGTACTGGACAATGCTCCCTGCAACCCCTTGCCTGGC +
Preference number: 5 (lower is better)
Translates to: GPGTRLVQDTLTHHR*TEVLDNAPCNPLPG
Trigger: GCCAGGCAAGGGGTTGCAGGGAGCATTGTCCAGTACCTCTGTCCATCTGTGATGGGTCAGGGTGTCTTGCACTAGTCGTGTCCCTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563453.1
CDS-3UTR CAA 90 bp CTCTCAGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGCACGTCCTCCGTGGCTaGAGAGAAGTCAACACCAAA +
Preference number: 5 (lower is better)
Translates to: LSGGQDPHPSPAFLGCPWHVLRG*REVNTK
Trigger: TTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGTG...CCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS GCA 90 bp ACCCTGACCCATCACAGATGGACAGAGGTACTGGACAATGCTCCCTaGAACCCCTTGCCTGGCCTTGTCTGCAACACCAGAAAGCCCGGC +
Preference number: 5 (lower is better)
Translates to: TLTHHRWTEVLDNAP*NPLPGLVCNTRKPG
Trigger: GCCGGGCTTTCTGGTGTTGCAGACAAGGCCAGGCAAGGGGTTGCAGGGAGCATTGTCCAGTACCTCTGTCCATCTGTGATGGGTCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563453.1
CDS-3UTR CAA 90 bp CACACAGCATCCTCTGCCGCCCGCAGGTCAGCCACTGAGTGCCCTAGGGACACGACACCAAATCCACCGTaGATCTGCACGTCGATGAAT +
Preference number: 5 (lower is better)
Translates to: HTASSAARRSATECPRDTTPNPP*ICTSMN
Trigger: ATTCATCGACGTGCAGATCAACGGTGGATTTGGTGT...CGTGTCCCTAGGGCACTCAGTGGCTGACCTGCGGGCGGCAGAGGATGCTGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563633.5
CDS-3UTR CAA 90 bp GGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGACACCAAATCCACCGTaGATCTGCACGTCGATGAAT +
Preference number: 5 (lower is better)
Translates to: GGQDPHPSPAFLGCPWGLTPNPP*ICTSMN
Trigger: ATTCATCGACGTGCAGATCAACGGTGGATTTGGTGT...CAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp GCCTCGAAGCTGTTCAGGGAGCCTCACGGCCCGTGTTTGCCACATGGGTGTGTGCACGTCCTCCGTGGCTaGAGAGAAGTCAACACCAAA +
Preference number: 5 (lower is better)
Translates to: ASKLFREPHGPCLPHGCVHVLRG*REVNTK
Trigger: TTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGTG...CACACACCCATGTGGCAAACACGGGCCGTGAGGCTCCCTGAACAGCTTCGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CAA 90 bp GGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGAAAGGCAGCATGGCGTaGAAGAGGTGGGTGATGAAG +
Preference number: 5 (lower is better)
Translates to: GRQGRGGYPCTSHLSGGQKGSMA*KRWVMK
Trigger: CTTCATCACCCACCTCTTCAACGCCATGCTGCCTTT...CTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp ACAGCCAGCAAGCTGGGCACAGGCGATGCTCAACCTCTAACACATCGGCTGAGATCTCAGCCGAGGTCCTaGTCACTGCCTAGCTGCGTC +
Preference number: 5 (lower is better)
Translates to: TASKLGTGDAQPLTHRLRSQPRS*SLPSCV
Trigger: GACGCAGCTAGGCAGTGACAAGGACCTCGGCTGAGA...TCTCAGCCGATGTGTTAGAGGTTGAGCATCGCCTGTGCCCAGCTTGCTGGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS-3UTR CAA 90 bp CCTAAGGGGTGCGCGGCCGTCAAGGCAGAGGTGGGTATCCCTGCACCTCACACCGACCATCCTATCTCTTaGGACCTGGAGACATTTCCT +
Preference number: 5 (lower is better)
Translates to: PKGCAAVKAEVGIPAPHTDHPIS*DLETFP
Trigger: AGGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTC...GGTGTGAGGTGCAGGGATACCCACCTCTGCCTTGACGGCCGCGCACCCCTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp GGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGGACCATCCTATCTCTTaGGACCTGGAGACATTTCCT +
Preference number: 5 (lower is better)
Translates to: GGQDPHPSPAFLGCPWGLDHPIS*DLETFP
Trigger: AGGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTC...CAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp TCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTGTGGGCGACCATCCTATCTCTTaGGACCTGGAGACATTTCCT +
Preference number: 5 (lower is better)
Translates to: SGSTSVACFPGLPLGLVGDHPIS*DLETFP
Trigger: AGGAAATGTCTCCAGGTCCAAAGAGATAGGATGGTC...GCCCACAAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp AGGAGGTCAGGATCCACATCCGTCGCCTGCTTTCCTGGGCTGCCCCTGGGGCTTACACCAAATCCACCGTaGATCTGCACGTCGATGAAT +
Preference number: 5 (lower is better)
Translates to: RRSGSTSVACFPGLPLGLTPNPP*ICTSMN
Trigger: ATTCATCGACGTGCAGATCAACGGTGGATTTGGTGT...AAGCCCCAGGGGCAGCCCAGGAAAGCAGGCGACGGATGTGGATCCTGACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp CAAGGCAGAGGTGGGTATCCCTGCACCTCACACCTCTCAGGAGGTCAGGATCCACACGTCCTCCGTGGCTaGAGAGAAGTCAACACCAAA +
Preference number: 5 (lower is better)
Translates to: QGRGGYPCTSHLSGGQDPHVLRG*REVNTK
Trigger: TTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGTG...TGGATCCTGACCTCCTGAGAGGTGTGAGGTGCAGGGATACCCACCTCTGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000648227.1
CDS-3UTR CAA 90 bp GGGGAAGGGAGCCACCCACCCCAGAACTCAAATGGAGAGAAAGTCAAGACAATCACACCAAATCCACCGTaGATCTGCACGTCGATGAAT +
Preference number: 5 (lower is better)
Translates to: GEGSHPPQNSNGEKVKTITPNPP*ICTSMN
Trigger: ATTCATCGACGTGCAGATCAACGGTGGATTTGGTGT...GATTGTCTTGACTTTCTCTCCATTTGAGTTCTGGGGTGGGTGGCTCCCTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000648227.1
CDS CCA 72 bp GGGGGTCGTGGGCCACCTGGCATGCGGGCTGGGACCTaGGACCCAGTGGGTCAGGGCGCTCACCTGCCACGT +
Preference number: 6 (lower is better)
Translates to: GGRGPPGMRAGT*DPVGQGAHLPR
Trigger: ACGTGGCAGGTGAGCGCCCTGACCCACTGGGTCCCAGGTCCCAGCCCGCATGCCAGGTGGCCCACGACCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000302956.8
ENST00000413459.7
ENST00000561487.1
ENST00000563145.1
ENST00000568263.5
ENST00000569879.5
CDS GCA 72 bp CACCCCGAGCCGGCCCCTCACCTAGGGACACGCAGATaGCACGGGCCGTCAGCGCCCGGATCACTTCGTGGC +
Preference number: 6 (lower is better)
Translates to: HPEPAPHLGTRR*HGPSAPGSLRG
Trigger: GCCACGAAGTGATCCGGGCGCTGACGGCCCGTGGCATCTGCGTGTCCCTAGGTGAGGGGCCGGCTCGGGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000565963.5
ENST00000566947.5
ENST00000567475.5
CDS GCA 72 bp GGGTTCCCCTGCCGGCCCCGGGCCGCACCGTTGATCTaGACGTCGATGAATCCGGGAGCCAAGATGCGGCCC +
Preference number: 6 (lower is better)
Translates to: GFPCRPRAAPLI*TSMNPGAKMRP
Trigger: GGGCCGCATCTTGGCTCCCGGATTCATCGACGTGCAGATCAACGGTGCGGCCCGGGGCCGGCAGGGGAACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000565963.5
CDS TCA 72 bp GTCGAGCACCACGAAGTCTGGGACAGAGCCGGGCAATaGGTAGGGGGCAGGAGTGGGGCCGCCCACCTACCC +
Preference number: 6 (lower is better)
Translates to: VEHHEVWDRAGQ*VGGRSGAAHLP
Trigger: GGGTAGGTGGGCGGCCCCACTCCTGCCCCCTACTCATTGCCCGGCTCTGTCCCAGACTTCGTGGTGCTCGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563453.1
CDS GCA 72 bp CGTGGCTACGGCCCAACTCTGGGGCCAGCGTCACGATaGGGACATTGTCCAGGGGCCCGTAGGTGGCCAGCA +
Preference number: 6 (lower is better)
Translates to: RGYGPTLGPASR*GHCPGARRWPA
Trigger: TGCTGGCCACCTACGGGCCCCTGGACAATGTCCGCATCGTGACGCTGGCCCCAGAGTTGGGCCGTAGCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563633.5
ENST00000565963.5
ENST00000567475.5
ENST00000568263.5
ENST00000570028.5
ENST00000648227.1
CDS GCA 72 bp CCTGCTAGCCCAGTCATCCTACCTGTCCTGGCCACCTaGCGCAGCTTACCCTGGGGATGGGCACGGTGGGCG +
Preference number: 6 (lower is better)
Translates to: PASPVILPVLAT*RSLPWGWARWA
Trigger: CGCCCACCGTGCCCATCCCCAGGGTAAGCTGCGGCAGGTGGCCAGGACAGGTAGGATGACTGGGCTAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563444.1
CDS GCA 72 bp GCCACTGAGTGCCCTGCGGGACCTGGATTCAGACTTTaGACCTGGCCCAGGTCCCCCAAGCAGGCCCACCCC +
Preference number: 6 (lower is better)
Translates to: ATECPAGPGFRL*TWPRSPKQAHP
Trigger: GGGGTGGGCCTGCTTGGGGGACCTGGGCCAGGTGCAAAGTCTGAATCCAGGTCCCGCAGGGCACTCAGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566947.5
CDS CCA 72 bp CAGATGCCACGGGCCGTCAGCGCCCGGATCACTTCGTaGCTACGGCCCAACTCTGGGGCCAGCGTCACGATG +
Preference number: 6 (lower is better)
Translates to: QMPRAVSARITS*LRPNSGASVTM
Trigger: CATCGTGACGCTGGCCCCAGAGTTGGGCCGTAGCCACGAAGTGATCCGGGCGCTGACGGCCCGTGGCATCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563633.5
ENST00000565963.5
ENST00000566947.5
ENST00000567475.5
ENST00000568263.5
ENST00000570028.5
ENST00000648227.1
CDS CCA 72 bp CAGCGCCCGGATCACTTCGTGGCTACGGCCCAACTCTaGGGCCAGCGTCACGATGCGGACATTGTCCAGGGG +
Preference number: 6 (lower is better)
Translates to: QRPDHFVATAQL*GQRHDADIVQG
Trigger: CCCCTGGACAATGTCCGCATCGTGACGCTGGCCCCAGAGTTGGGCCGTAGCCACGAAGTGATCCGGGCGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563633.5
ENST00000565963.5
ENST00000566947.5
ENST00000567475.5
ENST00000568263.5
ENST00000570028.5
ENST00000648227.1
CDS GCA 72 bp CCAGGCTGCCCGGTGACCCTGCGACAGGCCCTCACCTaGGTCAGCACCAAAGTCCAGGGTCCCCTTACTCTT +
Preference number: 6 (lower is better)
Translates to: PGCPVTLRQALT*VSTKVQGPLTL
Trigger: AAGAGTAAGGGGACCCTGGACTTTGGTGCTGACGCAGGTGAGGGCCTGTCGCAGGGTCACCGGGCAGCCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563453.1
CDS CCA 72 bp GTCGGCCACGCGCCGCTCCTCAAAGAACAGCTTCTCTaGGTCCAAGATGCGGCCTCCGCGCACCCACAGATC +
Preference number: 6 (lower is better)
Translates to: VGHAPLLKEQLL*VQDAASAHPQI
Trigger: GATCTGTGGGTGCGCGGAGGCCGCATCTTGGACCCAGAGAAGCTGTTCTTTGAGGAGCGGCGCGTGGCCGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563556.1
ENST00000563633.5
ENST00000565963.5
ENST00000566706.5
ENST00000567475.5
ENST00000569219.1
ENST00000569879.5
ENST00000648227.1
CDS CCA 72 bp GCGTCACGATGCGGACATTGTCCAGGGGCCCGTAGGTaGCCAGCAAGTCCTGGAAGGCATCGGCCTCGAAGG +
Preference number: 6 (lower is better)
Translates to: ASRCGHCPGARR*PASPGRHRPRR
Trigger: CCTTCGAGGCCGATGCCTTCCAGGACTTGCTGGCCACCTACGGGCCCCTGGACAATGTCCGCATCGTGACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563633.5
ENST00000565963.5
ENST00000567475.5
ENST00000568263.5
ENST00000570028.5
ENST00000648227.1
CDS CCA 72 bp CGTCCGCCTGCCACACCAGCTCACCCGAGATGTAGGTaGCCTGGACGTGAAGGGAGTCGTCGAGCACCACGA +
Preference number: 6 (lower is better)
Translates to: RPPATPAHPRCR*PGREGSRRAPR
Trigger: TCGTGGTGCTCGACGACTCCCTTCACGTCCAGGCCACCTACATCTCGGGTGAGCTGGTGTGGCAGGCGGACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000563145.1
ENST00000563444.1
ENST00000648227.1
CDS TCA 72 bp CCACACAGCATCCTCTGCCGCCCGCAGGTCAGCCACTaGGTGCCCTGCGGGACCTGGATTCAGACTTTGCAC +
Preference number: 6 (lower is better)
Translates to: PHSILCRPQVSH*VPCGTWIQTLH
Trigger: GTGCAAAGTCTGAATCCAGGTCCCGCAGGGCACTCAGTGGCTGACCTGCGGGCGGCAGAGGATGCTGTGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566947.5
CDS GCA 72 bp CCACCACTCACAGACCACCTAAACCCGCACCCGTGCTaGTCACTGACCTGTGGCCTGCAGGAAGTGCCGGAC +
Preference number: 6 (lower is better)
Translates to: PPLTDHLNPHPC*SLTCGLQEVPD
Trigger: GTCCGGCACTTCCTGCAGGCCACAGGTCAGTGAGCAGCACGGGTGCGGGTTTAGGTGGTCTGTGAGTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561487.1
ENST00000563145.1
CDS CCA 72 bp GCTCAGAACCTGCTAGCCCAGTCATCCTACCTGTCCTaGCCACCTGCCGCAGCTTACCCTGGGGATGGGCAC +
Preference number: 6 (lower is better)
Translates to: AQNLLAQSSYLS*PPAAAYPGDGH
Trigger: GTGCCCATCCCCAGGGTAAGCTGCGGCAGGTGGCCAGGACAGGTAGGATGACTGGGCTAGCAGGTTCTGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563444.1
CDS CCA 72 bp CAAGGCAGGGATGGCATCGGTGACCAGCACCAGCCCTaGGGGAGAAGAGGCTCAGAACCTGCTAGCCCAGTC +
Preference number: 6 (lower is better)
Translates to: QGRDGIGDQHQP*GRRGSEPASPV
Trigger: GACTGGGCTAGCAGGTTCTGAGCCTCTTCTCCCCCAGGGCTGGTGCTGGTCACCGATGCCATCCCTGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563444.1
CDS CCA 72 bp CTGAGTCACCAAGTACCCAATGCCCAGGAGCTCCTGTaGGCAGAGCTTGGGCTACAGTCCGGGCACCCGGTC +
Preference number: 6 (lower is better)
Translates to: LSHQVPNAQELL*AELGLQSGHPV
Trigger: GACCGGGTGCCCGGACTGTAGCCCAAGCTCTGCCCACAGGAGCTCCTGGGCATTGGGTACTTGGTGACTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563145.1
CDS TCA 72 bp TGCCTGGCCTTGTCTGCAACACCAGAAAGCCCGGCCTaGTGGCAACACGGGGCTACAACTGAGGCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: CLALSATPESPA*WQHGATTEAGS
Trigger: GCTGCCAGCCTCAGTTGTAGCCCCGTGTTGCCATCAGGCCGGGCTTTCTGGTGTTGCAGACAAGGCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563453.1
CDS GCA 72 bp GTGTCCTCTCAGCCGAGGTCCTTGTCACTGCCTAGCTaGGTCCGCCTGCCACACCAGCTCACCCGAGATGTA +
Preference number: 6 (lower is better)
Translates to: VSSQPRSLSLPS*VRLPHQLTRDV
Trigger: TACATCTCGGGTGAGCTGGTGTGGCAGGCGGACGCAGCTAGGCAGTGACAAGGACCTCGGCTGAGAGGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000563145.1
ENST00000563444.1
ENST00000648227.1
CDS GCA 72 bp GCCTGTCACCCTGGGCCTGAGTCACCAAGTACCCAATaGCCAGGAGCTCCTGTGGGCAGAGCTTGGGCTACA +
Preference number: 6 (lower is better)
Translates to: ACHPGPESPSTQ*PGAPVGRAWAT
Trigger: TGTAGCCCAAGCTCTGCCCACAGGAGCTCCTGGGCATTGGGTACTTGGTGACTCAGGCCCAGGGTGACAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563145.1
CDS CCA 72 bp AGACGTCCATTGGGGCTATGCTGCCACTCAGCGTCTTaGTGCCTTGAGAGCAGAGAGGGCAGGCTCTGGGGG +
Preference number: 6 (lower is better)
Translates to: RRPLGLCCHSAS*CLESREGRLWG
Trigger: CCCCCAGAGCCTGCCCTCTCTGCTCTCAAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000302956.8
ENST00000413459.7
ENST00000561487.1
ENST00000563145.1
ENST00000568263.5
ENST00000569879.5
CDS CCA 72 bp CCACCTAAACCCGCACCCGTGCTGCTCACTGACCTGTaGCCTGCAGGAAGTGCCGGACACAGACGTCCATTG +
Preference number: 6 (lower is better)
Translates to: PPKPAPVLLTDL*PAGSAGHRRPL
Trigger: CAATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCACAGGTCAGTGAGCAGCACGGGTGCGGGTTTAGGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561487.1
ENST00000563145.1
CDS CCA 72 bp GGGCCACGAGGGCAACCCCCGAACCCACGTCCTCCGTaGCTTGAGAGAAGTCAACACCAAATCCACCTGAGC +
Preference number: 6 (lower is better)
Translates to: GPRGQPPNPRPP*LERSQHQIHLS
Trigger: GCTCAGGTGGATTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGTGGGTTCGGGGGTTGCCCTCGTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568263.5
CDS CCA 72 bp GGGCCACGAGGGCAACCCCCGAACCCACGTCCTCCGTaGCTTGAGAGAAGTCAACACCAAATCCACCTGCAG +
Preference number: 6 (lower is better)
Translates to: GPRGQPPNPRPP*LERSQHQIHLQ
Trigger: CTGCAGGTGGATTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGTGGGTTCGGGGGTTGCCCTCGTGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565963.5
CDS CAA 90 bp CCTCCGGGCCACGAGGGCAACCCCCGAACCCACGTCCTCCGTGGCTaGAGAGAAGTCAACACCAAATCCACCGTTGATCTGCACGTCGAT +
Preference number: 6 (lower is better)
Translates to: PPGHEGNPRTHVLRG*REVNTKSTVDLHVD
Trigger: ATCGACGTGCAGATCAACGGTGGATTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGTGGGTTCGGGGGTTGCCCTCGTGGCCCGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563556.1
ENST00000563633.5
ENST00000566706.5
ENST00000567475.5
ENST00000569219.1
ENST00000569879.5
ENST00000648227.1
CDS CAA 72 bp CTGTGGCCTGCAGGAAGTGCCGGACACAGACGTCCATaGGGGCTATGCTGCCACTCAGCGTCTTGGTGCCTT +
Preference number: 6 (lower is better)
Translates to: LWPAGSAGHRRP*GLCCHSASWCL
Trigger: AAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302956.8
ENST00000413459.7
ENST00000561487.1
ENST00000563145.1
ENST00000568263.5
CDS CAA 90 bp CTCACTGACCTGTGGCCTGCAGGAAGTGCCGGACACAGACGTCCATaGGGGCTATGCTGCCACTCAGCGTCTTGGTGCCTTGAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: LTDLWPAGSAGHRRP*GLCCHSASWCLESR
Trigger: TCTGCTCTCAAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGCAGGCCACAGGTCAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561487.1
ENST00000563145.1
CDS GCA 72 bp GGAAGTGCCGGACACAGACGTCCATTGGGGCTATGCTaGCACTCAGCGTCTTGGTGCCTTGAGAGCAGAGAG +
Preference number: 6 (lower is better)
Translates to: GSAGHRRPLGLC*HSASWCLESRE
Trigger: CTCTCTGCTCTCAAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302956.8
ENST00000413459.7
ENST00000561487.1
ENST00000563145.1
ENST00000568263.5
CDS GCA 72 bp GCAGGAAGTGCCGGACACAGACGTCCATTGGGGCTATaGTGCCACTCAGCGTCTTGGTGCCTTGAGAGCAGA +
Preference number: 6 (lower is better)
Translates to: AGSAGHRRPLGL*CHSASWCLESR
Trigger: TCTGCTCTCAAGGCACCAAGACGCTGAGTGGCAGCATAGCCCCAATGGACGTCTGTGTCCGGCACTTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000302956.8
ENST00000413459.7
ENST00000561487.1
ENST00000563145.1
ENST00000568263.5
CDS CAA 90 bp CATCACAGATGGACAGAGGTACTGGACAATGCTCCCTGCAACCCCTaGCCTGGCCTTGTCTGCAACACCAGAAAGCCCGGCCTGATGGCA +
Preference number: 6 (lower is better)
Translates to: HHRWTEVLDNAPCNP*PGLVCNTRKPGLMA
Trigger: TGCCATCAGGCCGGGCTTTCTGGTGTTGCAGACAAGGCCAGGCAAGGGGTTGCAGGGAGCATTGTCCAGTACCTCTGTCCATCTGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563453.1
CDS CAA 72 bp CACGAGGGCAACCCCCGAACCCACGTCCTCCGTGGCTaGAGAGAAGTCAACACCAAATCCACCGTTGATCTG +
Preference number: 6 (lower is better)
Translates to: HEGNPRTHVLRG*REVNTKSTVDL
Trigger: CAGATCAACGGTGGATTTGGTGTTGACTTCTCTCAAGCCACGGAGGACGTGGGTTCGGGGGTTGCCCTCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000293971.11
ENST00000302956.8
ENST00000413459.7
ENST00000563556.1
ENST00000563633.5
ENST00000566706.5
ENST00000567475.5
ENST00000569219.1
ENST00000569879.5
ENST00000648227.1