RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALOX5 (Homo sapiens)

Ensembl gene IDs: ENSG00000012779, ENSG00000275565

Ensembl transcript IDs: ENST00000374391.7, ENST00000475300.1, ENST00000481117.1, ENST00000483623.2, ENST00000493336.1, ENST00000498461.1, ENST00000542434.5, ENST00000610656.4, ENST00000612275.1, ENST00000612635.4, ENST00000616521.4, ENST00000617751.4, ENST00000622021.4, ENST00000622032.1, ENST00000622238.1, ENST00000622781.4

Found 910 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGATGCCAGCAGGAGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTaGTCAATGGTCACCACGCCCTTGGCAGTCGGTGGCGGGGCTCGC +
Preference number: 1 (lower is better)
Translates to: RCQQERPRSGSVSTI*SMVTTPLAVGGGAR
Trigger: GCGAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCTCCTGCTGGCATCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 90 bp AGCAGGAGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATaGTCACCACGCCCTTGGCAGTCGGTGGCGGGGCTCGCATGGTTG +
Preference number: 1 (lower is better)
Translates to: SRSGRGRAACPRSAQ*SPRPWQSVAGLAWL
Trigger: CAACCATGCGAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCTCCTGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 90 bp GCCCAGGAACAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTaGACCCAGATGCCAGCAGGAGCGGCCGCGGTCGGGCAGCGTGTC +
Preference number: 1 (lower is better)
Translates to: AQEQLVFLELAQRPH*TQMPAGAAAVGQRV
Trigger: GACACGCTGCCCGACCGCGGCCGCTCCTGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTTCCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 90 bp TGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCTaGTCCCGGCTCTTGACCGACTTGGGGAAGCCTGAGGACTTGCGG +
Preference number: 1 (lower is better)
Translates to: WAEAVKITTVRYSDS*SRLLTDLGKPEDLR
Trigger: CCGCAAGTCCTCAGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 90 bp GAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTaGCCAGACAGCCTGCCAGGCAGGCTGGAGTCCATCTGGCTGGGG +
Preference number: 1 (lower is better)
Translates to: ERYWPRRKRCDCQEA*PDSLPGRLESIWLG
Trigger: CCCCAGCCAGATGGACTCCAGCCTGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR GCA 90 bp ACGATGAAAATGTTCCCTTGCTGGACCTCCTGCTCCAAGCTGAGCTaGCGCTCCAGGCTGCACTCTACCATCTCCGTGGTCACCGGGAGC +
Preference number: 1 (lower is better)
Translates to: TMKMFPCWTSCSKLS*RSRLHSTISVVTGS
Trigger: GCTCCCGGTGACCACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 90 bp GAGGCCACACTCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTaGAATGGTGAATCTCACGTGTGCCACCAGCAGCTTGAAAATGGG +
Preference number: 1 (lower is better)
Translates to: EATLADELLTGLGVD*NGESHVCHQQLENG
Trigger: CCCATTTTCAAGCTGCTGGTGGCACACGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 90 bp CCTGTGGCGTTGGCCTTGTCAAAGAGGCCACACTCGCAGATGAGCTaGTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCACGTGT +
Preference number: 1 (lower is better)
Translates to: PVALALSKRPHSQMS*SRALVLIAMVNLTC
Trigger: ACACGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGGCCTCTTTGACAAGGCCAACGCCACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 90 bp TTGGCCAGGTTCTTATACAGCAAGCAGATGGGAGCGGCCAGGAACTaGAGTGTGCAGGGGTCTGTTTTGTTGGCATCGATGCCATCCAGC +
Preference number: 1 (lower is better)
Translates to: LARFLYSKQMGAARN*SVQGSVLLASMPSS
Trigger: GCTGGATGGCATCGATGCCAACAAAACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAACCTGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 90 bp GACACCAGATGTGTTCGCAGAAGGTGGGTGATGGTCTGGTGGACGTaGAAGTCACTGGAACGCACCCAGATTTTGGCCAAAAGCCAGTCG +
Preference number: 1 (lower is better)
Translates to: DTRCVRRRWVMVWWT*KSLERTQILAKSQS
Trigger: CGACTGGCTTTTGGCCAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCCACCAGACCATCACCCACCTTCTGCGAACACATCTGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 90 bp GCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGACGCTGTaGAGTCCTGCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACT +
Preference number: 1 (lower is better)
Translates to: AAWCGNAELGVDRTL*SPALCRMGPYGVYT
Trigger: AGTGTAAACACCATAGGGACCCATTCTACACAGAGCAGGACTGCACAGCGTCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR GCA 90 bp GGTTCTTATACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTaGAGGGGTCTGTTTTGTTGGCATCGATGCCATCCAGCAGCTCAA +
Preference number: 1 (lower is better)
Translates to: GSYTASRWERPGTGV*RGLFCWHRCHPAAQ
Trigger: TTGAGCTGCTGGATGGCATCGATGCCAACAAAACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 90 bp ACCTCAGACACCAGATGTGTTCGCAGAAGGTGGGTGATGGTCTGGTaGACGTGGAAGTCACTGGAACGCACCCAGATTTTGGCCAAAAGC +
Preference number: 1 (lower is better)
Translates to: TSDTRCVRRRWVMVW*TWKSLERTQILAKS
Trigger: GCTTTTGGCCAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCCACCAGACCATCACCCACCTTCTGCGAACACATCTGGTGTCTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR TCA 90 bp AGTAATATGGCAGCTGCTTCTTCTTGTTGCGCTCAGCAATCACGCTaGCAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCCT +
Preference number: 1 (lower is better)
Translates to: SNMAAASSCCAQQSR*QWPRGSCGIGPWLP
Trigger: AGGAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAGAAGCAGCTGCCATATTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 90 bp ATTGCAATGCCAAAAACCTCAGACACCAGATGTGTTCGCAGAAGGTaGGTGATGGTCTGGTGGACGTGGAAGTCACTGGAACGCACCCAG +
Preference number: 1 (lower is better)
Translates to: IAMPKTSDTRCVRRR*VMVWWTWKSLERTQ
Trigger: CTGGGTGCGTTCCAGTGACTTCCACGTCCACCAGACCATCACCCACCTTCTGCGAACACATCTGGTGTCTGAGGTTTTTGGCATTGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR TCA 90 bp CAATGCCAAAAACCTCAGACACCAGATGTGTTCGCAGAAGGTGGGTaGTGGTCTGGTGGACGTGGAAGTCACTGGAACGCACCCAGATTT +
Preference number: 1 (lower is better)
Translates to: QCQKPQTPDVFAEGG*WSGGRGSHWNAPRF
Trigger: AAATCTGGGTGCGTTCCAGTGACTTCCACGTCCACCAGACCATCACCCACCTTCTGCGAACACATCTGGTGTCTGAGGTTTTTGGCATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 90 bp TTGCGGAATCGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAATaGTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGAAC +
Preference number: 1 (lower is better)
Translates to: LRNRAMASFTGFSIK*SSGYMPRNSSFSWN
Trigger: GTTCCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 90 bp AAAACCTCAGACACCAGATGTGTTCGCAGAAGGTGGGTGATGGTCTaGTGGACGTGGAAGTCACTGGAACGCACCCAGATTTTGGCCAAA +
Preference number: 1 (lower is better)
Translates to: KTSDTRCVRRRWVMV*WTWKSLERTQILAK
Trigger: TTTGGCCAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCCACCAGACCATCACCCACCTTCTGCGAACACATCTGGTGTCTGAGGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR TCA 90 bp AATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTaGTTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTG +
Preference number: 1 (lower is better)
Translates to: NHPMSPTRIDIYQWS*FAVAAWCGNAELGV
Trigger: CACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR CCA 90 bp TTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTaGAACATGTGCATGAAGCGGTTGATGAACAGGTTCTCCATCGCT +
Preference number: 1 (lower is better)
Translates to: LTKIFSKSAKSFQED*NMCMKRLMNRFSIA
Trigger: AGCGATGGAGAACCTGTTCATCAACCGCTTCATGCACATGTTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CAA 90 bp CGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTaGGCAGTCGGTGGCGGGGCTCGCATGGTTGGGGGCGCATTGGGG +
Preference number: 2 (lower is better)
Translates to: RSGSVSTICSMVTTP*AVGGGARMVGGALG
Trigger: CCCCAATGCGCCCCCAACCATGCGAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR TCA 90 bp TCCACGATCTGCTCAATGGTCACCACGCCCTTGGCAGTCGGTGGCGGGGCTCGCCGTACTGGCCGAAGTTaGCCGCGGCGTGCTGGGCGG +
Preference number: 2 (lower is better)
Translates to: STICSMVTTPLAVGGGARRTGRS*PRRAGR
Trigger: CCGCCCAGCACGCCGCGGTCAACTTCGGCCAGTACG...GCGAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR TCA 90 bp GCGGCGTGCTGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCCGACTTGGGGAAGCCTaGGGACTTGCGGCCCCGCAT +
Preference number: 2 (lower is better)
Translates to: AACWAEAVKITTVRYSDSRLGEA*GLAAPH
Trigger: ATGCGGGGCCGCAAGTCCTCAGGCTTCCCCAAGTCG...GCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR TCA 90 bp CAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGCACGTACTGGCCGAAGTTaGCCGCGGCGTGCTGGGCGG +
Preference number: 2 (lower is better)
Translates to: QLVFLELAQRPHCTQMPARTGRS*PRRAGR
Trigger: CCGCCCAGCACGCCGCGGTCAACTTCGGCCAGTACG...TGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp TCCACGATCTGCTCAATGGTCACCACGCCCTTGGCAGTCGGTGGCGGGGCTCGCTGCTCCAAGCTGAGCTaGCGCTCCAGGCTGCACTCT +
Preference number: 2 (lower is better)
Translates to: STICSMVTTPLAVGGGARCSKLS*RSRLHS
Trigger: AGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCA...GCGAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp AGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTAGGGGATGTCTTCTTTaGTCTCCATGCCCCGGGCCT +
Preference number: 2 (lower is better)
Translates to: SGRGRAACPRSAQWSPRPRGCLL*SPCPGP
Trigger: AGGCCCGGGGCATGGAGAGCAAAGAAGACATCCCCT...AGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp GAACAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGCCCTTGGCAGTCGGTaGCGGGGCTCGCATGGTTGG +
Preference number: 2 (lower is better)
Translates to: EQLVFLELAQRPHCTQMPALGSR*RGSHGW
Trigger: CCAACCATGCGAGCCCCGCCACCGACTGCCAAGGGC...TGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp GCGGCGTGCTGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCTATACAGCAAGCAGATaGGAGCGGCCAGGAACTGGA +
Preference number: 2 (lower is better)
Translates to: AACWAEAVKITTVRYSDSYTASR*ERPGTG
Trigger: TCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATA...GCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp GAACAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGCTGCCGCTCCAGGCTaGACTCTACCATCTCCGTGG +
Preference number: 2 (lower is better)
Translates to: EQLVFLELAQRPHCTQMPAAAPG*TLPSPW
Trigger: CCACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGC...TGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp TCCACGATCTGCTCAATGGTCACCACGCCCTTGGCAGTCGGTGGCGGGGCTCGCCCAGGAACTGGAGTGTaGAGGGGTCTGTTTTGTTGG +
Preference number: 2 (lower is better)
Translates to: STICSMVTTPLAVGGGARPGTGV*RGLFCW
Trigger: CCAACAAAACAGACCCCTGCACACTCCAGTTCCTGG...GCGAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp GTCCTCCTCCACCACCTGGTCGCCCTCGTAGTAGATGTCTACCACCTCGGCCGTCACTCGCAGATGAGCTaGTCACGGGCCTTGGTGTTG +
Preference number: 2 (lower is better)
Translates to: VLLHHLVALVVDVYHLGRHSQMS*SRALVL
Trigger: CAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTG...ACGGCCGAGGTGGTAGACATCTACTACGAGGGCGACCAGGTGGTGGAGGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp AGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTGGCCTTGGTGTTGATTaGAATGGTGAATCTCACGTG +
Preference number: 2 (lower is better)
Translates to: SGRGRAACPRSAQWSPRPGLGVD*NGESHV
Trigger: CACGTGAGATTCACCATTGCAATCAACACCAAGGCC...AGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp TCCACGATCTGCTCAATGGTCACCACGCCCTTGGCAGTCGGTGGCGGGGCTCGCAAAATGTTCCCTTGCTaGACCTCCTGCTCCAAGCTG +
Preference number: 2 (lower is better)
Translates to: STICSMVTTPLAVGGGARKMFPC*TSCSKL
Trigger: CAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTT...GCGAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp GTCCTCCTCCACCACCTGGTCGCCCTCGTAGTAGATGTCTACCACCTCGGCCGTTGCACAGCAGGCAGCTaGCGGTACATTGCAATGCCA +
Preference number: 2 (lower is better)
Translates to: VLLHHLVALVVDVYHLGRCTAGS*RYIAMP
Trigger: TGGCATTGCAATGTACCGCCAGCTGCCTGCTGTGCA...ACGGCCGAGGTGGTAGACATCTACTACGAGGGCGACCAGGTGGTGGAGGAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp CAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGCACCACGATCTGCTCAATaGTCACCACGCCCTTGGCAG +
Preference number: 2 (lower is better)
Translates to: QLVFLELAQRPHCTQMPAPRSAQ*SPRPWQ
Trigger: CTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGG...TGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR TCA 90 bp GTGTGCCACCAGCAGCTTGAAAATGGGGTGCACAGCAGGCAGCTGGCGGTACATTTCGCAGAAGGTGGGTaGTGGTCTGGTGGACGTGGA +
Preference number: 2 (lower is better)
Translates to: VCHQQLENGVHSRQLAVHFAEGG*WSGGRG
Trigger: TCCACGTCCACCAGACCATCACCCACCTTCTGCGAA...ATGTACCGCCAGCTGCCTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR TCA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAAGCTGCTCCCGGCTCTTaGCCGACTTGGGGAAGCCTG +
Preference number: 2 (lower is better)
Translates to: LLVALSNHADNGLEVLAEAAPGS*PTWGSL
Trigger: CAGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGC...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGACCTGGCCAGACAGCCTaGCAGGCAGGCTGGAGTCCA +
Preference number: 2 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGPGQTA*QAGWSP
Trigger: TGGACTCCAGCCTGCCTGGCAGGCTGTCTGGCCAGG...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR GCA 90 bp AGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGAAGTCCTGCACACTCGCAGATGAGCTaGTCACGGGCCTTGGTGTTG +
Preference number: 2 (lower is better)
Translates to: RTCGPACRTRRHRSRSPAHSQMS*SRALVL
Trigger: CAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTG...TGCAGGACTTCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp CTCGGGAAAGCACAGGGAGGCATAGGTCAGGTCCTTCATGGCCCTCTGCACCATACTCTACCATCTCCGTaGTCACCGGGAGCTTCTCGG +
Preference number: 2 (lower is better)
Translates to: LGKAQGGIGQVLHGPLHHTLPSP*SPGASR
Trigger: CCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGT...ATGGTGCAGAGGGCCATGAAGGACCTGACCTATGCCTCCCTGTGCTTTCCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp CAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGCAGGACGTGGAAGTCACTaGAACGCACCCAGATTTTGG +
Preference number: 2 (lower is better)
Translates to: QLVFLELAQRPHCTQMPAGRGSH*NAPRFW
Trigger: CCAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCC...TGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp GGAAGCCTGAGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGATGGGTGATGGTCTGGTaGACGTGGAAGTCACTGGAA +
Preference number: 2 (lower is better)
Translates to: GSLRTCGPACRTRRHRSRWVMVW*TWKSLE
Trigger: TTCCAGTGACTTCCACGTCCACCAGACCATCACCCA...TCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CAA 90 bp GCCTTGTCAAAGAGGCCACACTCGCAGATGAGCTGCTCACGGGCCTaGGTGTTGATTGCAATGGTGAATCTCACGTGTGCCACCAGCAGC +
Preference number: 2 (lower is better)
Translates to: ALSKRPHSQMSCSRA*VLIAMVNLTCATSS
Trigger: GCTGCTGGTGGCACACGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGGCCTCTTTGACAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR TCA 90 bp GAAAATGTTCCCTTGCTGGACCTCCTGCTCCAAGCTGAGCTGCCGCTCCAGGCTAGGTCTTCCTGCCAGTaGTTCATGACCCGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: ENVPLLDLLLQAELPLQARSSCQ*FMTRSE
Trigger: TTCTGAGCGGGTCATGAATCACTGGCAGGAAGACCT...AGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR TCA 90 bp GAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTGTTGCGCTGGCCACACTCGCAGATaGGCTGCTCACGGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: ESGLGTSSNMAAASSCCAGHTRR*AAHGPW
Trigger: CCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGGCC...AGCGCAACAAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp ACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTGCCCTCTGCACCATCTaGACGTGCCCACCGCCCCCT +
Preference number: 2 (lower is better)
Translates to: TVRNPVWGQVVIWQLLLLALCTI*TCPPPP
Trigger: AGGGGGCGGTGGGCACGTGCAGATGGTGCAGAGGGC...AAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp GTTCTTGCGGAATCGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAATGCTCGCTCAGCGCCCACACTaGACCCAGATGCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: VLAESGHGFLHRLLDKMLAQRPH*TQMPAG
Trigger: TCCTGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGC...GAGCATTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATCTGGCTGGGGCAGCTaGCCTTCCCACAGTGAGACT +
Preference number: 2 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGSGWGS*PSHSET
Trigger: AGTCTCACTGTGGGAAGGCCAGCTGCCCCAGCCAGA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp GGAAGCCTGAGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGATCATCTCCCGGGATTTaGTTGAGCTGGATGGCAATG +
Preference number: 2 (lower is better)
Translates to: GSLRTCGPACRTRRHRSRSSPGI*LSWMAM
Trigger: CATTGCCATCCAGCTCAACCAAATCCCGGGAGATGA...TCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp GTTCTTGCGGAATCGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAATGCTCGCCCACCGCCCCCTGTaGCGTTGGCCTTGTCAAAGA +
Preference number: 2 (lower is better)
Translates to: VLAESGHGFLHRLLDKMLAHRPL*RWPCQR
Trigger: TCTTTGACAAGGCCAACGCCACAGGGGGCGGTGGGC...GAGCATTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCAAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR TCA 90 bp GGAAGCCTGAGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGAGCTCAAAGTCCACGATaGAAATGTTCCCTTGCTGGA +
Preference number: 2 (lower is better)
Translates to: GSLRTCGPACRTRRHRSRAQSPR*KCSLAG
Trigger: TCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGC...TCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR TCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGGCTGGGCGGAGGCGGTaGAGATCACCACGGTCAGGT +
Preference number: 2 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWAGRRR*RSPRSG
Trigger: ACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGC...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp ACCTCCTGCTCCAAGCTGAGCTGCCGCTCCAGGCTGCACTCTACCATCTCCGTGGAAGACTGGAACATGTaGATGAAGCGGTTGATGAAC +
Preference number: 2 (lower is better)
Translates to: TSCSKLSCRSRLHSTISVEDWNM*MKRLMN
Trigger: GTTCATCAACCGCTTCATGCACATGTTCCAGTCTTC...CACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp GGAAGCCTGAGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGACAGCTGGCGGTACATTaGAATGCCAAAAACCTCAGA +
Preference number: 2 (lower is better)
Translates to: GSLRTCGPACRTRRHRSRQLAVH*NAKNLR
Trigger: TCTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTG...TCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAAAGCTTGAAAATGGGGTaGACAGCAGGCAGCTGGCGG +
Preference number: 2 (lower is better)
Translates to: LLVALSNHADNGLEVLAESLKMG*TAGSWR
Trigger: CCGCCAGCTGCCTGCTGTGCACCCCATTTTCAAGCT...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCCTTCATGGCCCTCTaGACCATCTGCACGTGCCCA +
Preference number: 2 (lower is better)
Translates to: LLVALSNHADNGLEVLAESFMAL*TICTCP
Trigger: TGGGCACGTGCAGATGGTGCAGAGGGCCATGAAGGA...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp GTGTGCCACCAGCAGCTTGAAAATGGGGTGCACAGCAGGCAGCTGGCGGTACATTCATCTCCCGGGATTTaGTTGAGCTGGATGGCAATG +
Preference number: 2 (lower is better)
Translates to: VCHQQLENGVHSRQLAVHSSPGI*LSWMAM
Trigger: CATTGCCATCCAGCTCAACCAAATCCCGGGAGATGA...ATGTACCGCCAGCTGCCTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp GTCCTCCTCCACCACCTGGTCGCCCTCGTAGTAGATGTCTACCACCTCGGCCGTAACGCACCCAGATTTTaGCCAAAAGCCAGTCGTATT +
Preference number: 2 (lower is better)
Translates to: VLLHHLVALVVDVYHLGRNAPRF*PKASRI
Trigger: AATACGACTGGCTTTTGGCCAAAATCTGGGTGCGTT...ACGGCCGAGGTGGTAGACATCTACTACGAGGGCGACCAGGTGGTGGAGGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CAA 90 bp AAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCAGGGGTCTGTTTaGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAA +
Preference number: 2 (lower is better)
Translates to: KQMGAARNWSVQGSV*LASMPSSSSKSTMK
Trigger: TTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAAACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCCCATCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CAA 90 bp TCTCCCGGGATTTGGTTGAGCTGGATGGCAATGGGGACAATCTTGTaGGCCAGGTTCTTATACAGCAAGCAGATGGGAGCGGCCAGGAAC +
Preference number: 2 (lower is better)
Translates to: SPGIWLSWMAMGTIL*ARFLYSKQMGAARN
Trigger: GTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAACCTGGCCAACAAGATTGTCCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp ACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTGCTGCCGCTCCAGGCTaGACTCTACCATCTCCGTGG +
Preference number: 2 (lower is better)
Translates to: TVRNPVWGQVVIWQLLLLAAAPG*TLPSPW
Trigger: CCACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGC...AAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGCCTTGCTGGACCTCCTaGTCCAAGCTGAGCTGCCGC +
Preference number: 2 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWPCWTS*SKLSCR
Trigger: GCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGG...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp GAACAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCACAGCTGGCGGTACATTaGAATGCCAAAAACCTCAGA +
Preference number: 2 (lower is better)
Translates to: EQLVFLELAQRPHCTQMPQLAVH*NAKNLR
Trigger: TCTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTG...TGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGCCTGCCAGGCAGGCTaGAGTCCATCTGGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: MQFPEDQRINGKVLASEEACQAG*SPSGWG
Trigger: GCCCCAGCCAGATGGACTCCAGCCTGCCTGGCAGGC...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGCCTGCCAGGCAGGCTaGAGTCCATCTGGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: SMQFPEDQRINGKVLASEACQAG*SPSGWG
Trigger: GCCCCAGCCAGATGGACTCCAGCCTGCCTGGCAGGC...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp TGGCCAGGTTCTTATACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCAAAATGTTCCCTTGCTaGACCTCCTGCTCCAAGCTG +
Preference number: 2 (lower is better)
Translates to: WPGSYTASRWERPGTGVCKMFPC*TSCSKL
Trigger: CAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTT...GCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAACCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp TGGCCAGGTTCTTATACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCAGGGGTCTGTTTTGTTaGCATCGATGCCATCCAGCA +
Preference number: 2 (lower is better)
Translates to: WPGSYTASRWERPGTGVCRGLFC*HRCHPA
Trigger: TGCTGGATGGCATCGATGCCAACAAAACAGACCCCT...GCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAACCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAAAGGTGGGTGATGGTCTaGTGGACGTGGAAGTCACTG +
Preference number: 2 (lower is better)
Translates to: LLVALSNHADNGLEVLAERWVMV*WTWKSL
Trigger: CAGTGACTTCCACGTCCACCAGACCATCACCCACCT...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CAA 90 bp TCAAAGAGGCCACACTCGCAGATGAGCTGCTCACGGGCCTTGGTGTaGATTGCAATGGTGAATCTCACGTGTGCCACCAGCAGCTTGAAA +
Preference number: 2 (lower is better)
Translates to: SKRPHSQMSCSRALV*IAMVNLTCATSSLK
Trigger: TTTCAAGCTGCTGGTGGCACACGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGGCCTCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGCCTGGCCAGACAGCCTaGCAGGCAGGCTGGAGTCCA +
Preference number: 2 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWPGQTA*QAGWSP
Trigger: TGGACTCCAGCCTGCCTGGCAGGCTGTCTGGCCAGG...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR GCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGTGCTCCAAGCTGAGCTaGCGCTCCAGGCTGCACTCT +
Preference number: 2 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWCSKLS*RSRLHS
Trigger: AGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCA...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGAGGTACTCCGACAGCTaGTCCCGGCTCTTGACCGAC +
Preference number: 2 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWRYSDS*SRLLTD
Trigger: GTCGGTCAAGAGCCGGGAGCAGCTGTCGGAGTACCT...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCAGGCTGGAGTCCATCTaGCTGGGGCAGCTGGCCTTC +
Preference number: 2 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTARLESI*LGQLAF
Trigger: GAAGGCCAGCTGCCCCAGCCAGATGGACTCCAGCCT...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGACTGCCAAGAGGCCTaGCCAGACAGCCTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCDCQEA*PDSLPG
Trigger: GCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGGACTGCCAAGAGGCCTaGCCAGACAGCCTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWDCQEA*PDSLPG
Trigger: GCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTC...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGGGAGCGGCCAGGAACTaGAGTGTGCAGGGGTCTGTT +
Preference number: 2 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWGAARN*SVQGSV
Trigger: AACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCC...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CAA 90 bp TTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTaGCGGAATCGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAA +
Preference number: 2 (lower is better)
Translates to: FLLRSAITLTMASRF*RNRAMASFTGFSIK
Trigger: TTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR TCA 90 bp AGCAGCTCAAAGTCCACGATGAAAATGTTCCCTTGCTGGACCTCCTGCTCCAAGAGGTCTTCCTGCCAGTaGTTCATGACCCGCTCAGAA +
Preference number: 2 (lower is better)
Translates to: SSSKSTMKMFPCWTSCSKRSSCQ*FMTRSE
Trigger: TTCTGAGCGGGTCATGAATCACTGGCAGGAAGACCT...CTTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR GCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGAGGGGATGTCTTCTTTaGTCTCCATGCCCCGGGCCT +
Preference number: 2 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWRGCLL*SPCPGP
Trigger: AGGCCCGGGGCATGGAGAGCAAAGAAGACATCCCCT...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGCCTGCCAGGCAGGCTaGAGTCCATCTGGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKACQAG*SPSGWG
Trigger: GCCCCAGCCAGATGGACTCCAGCCTGCCTGGCAGGC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp GTTCTTGCGGAATCGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAATGCTCTATACAGCAAGCAGATaGGAGCGGCCAGGAACTGGA +
Preference number: 2 (lower is better)
Translates to: VLAESGHGFLHRLLDKMLYTASR*ERPGTG
Trigger: TCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATA...GAGCATTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCAAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp TCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCACGGGGATTTGGTTGAGCTaGATGGCAATGGGGACAATC +
Preference number: 2 (lower is better)
Translates to: SQMSCSRALVLIAMVNLTGIWLS*MAMGTI
Trigger: GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCC...CGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTCTGGCTGGGGCAGCTaGCCTTCCCACAGTGAGACT +
Preference number: 2 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWSGWGS*PSHSET
Trigger: AGTCTCACTGTGGGAAGGCCAGCTGCCCCAGCCAGA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp CTCGGGAAAGCACAGGGAGGCATAGGTCAGGTCCTTCATGGCCCTCTGCACCATGGTTCTCCATCGCTTTaGAGTAATTCAGAACAAAGT +
Preference number: 2 (lower is better)
Translates to: LGKAQGGIGQVLHGPLHHGSPSL*SNSEQS
Trigger: ACTTTGTTCTGAATTACTCCAAAGCGATGGAGAACC...ATGGTGCAGAGGGCCATGAAGGACCTGACCTATGCCTCCCTGTGCTTTCCCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp GAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTGTTGCGCTGGACGTGGAAGTCACTaGAACGCACCCAGATTTTGG +
Preference number: 2 (lower is better)
Translates to: ESGLGTSSNMAAASSCCAGRGSH*NAPRFW
Trigger: CCAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCC...AGCGCAACAAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp ACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTAGGTGGGTGATGGTCTaGTGGACGTGGAAGTCACTG +
Preference number: 2 (lower is better)
Translates to: TVRNPVWGQVVIWQLLLLRWVMV*WTWKSL
Trigger: CAGTGACTTCCACGTCCACCAGACCATCACCCACCT...AAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGTGCACAGCAGGCAGCTaGCGGTACATTGCAATGCCA +
Preference number: 2 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWCTAGS*RYIAMP
Trigger: TGGCATTGCAATGTACCGCCAGCTGCCTGCTGTGCA...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR TCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCGGAGGAAGAGATGTaGCTGCCAAGAGGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSSEEEM*LPRGLA
Trigger: GGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGACTGCCAAGAGGCCTaGCCAGACAGCCTGCCAGGC +
Preference number: 2 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSDCQEA*PDSLPG
Trigger: GCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCATTCCAAGAAGACTaGAACATGTGCATGAAGCGG +
Preference number: 2 (lower is better)
Translates to: LLVALSNHADNGLEVLAESFQED*NMCMKR
Trigger: CCGCTTCATGCACATGTTCCAGTCTTCTTGGAATGA...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR TCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATCGGAGGAAGAGATGTaGCTGCCAAGAGGCCTGGCC +
Preference number: 2 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKSEEEM*LPRGLA
Trigger: GGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGTGGACAGGACGCTGTaGAGTCCTGCTCTGTGTAGA +
Preference number: 2 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCVDRTL*SPALCR
Trigger: TCTACACAGAGCAGGACTGCACAGCGTCCTGTCCAC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATCTGGCTGGGGCAGCTaGCCTTCCCACAGTGAGACT +
Preference number: 2 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKSGWGS*PSHSET
Trigger: AGTCTCACTGTGGGAAGGCCAGCTGCCCCAGCCAGA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp ATAGGGTTCTCATCTCCCGGGATTTGGTTGAGCTGGATGGCAATGGGGACAATCTCATTCCAAGAAGACTaGAACATGTGCATGAAGCGG +
Preference number: 2 (lower is better)
Translates to: IGFSSPGIWLSWMAMGTISFQED*NMCMKR
Trigger: CCGCTTCATGCACATGTTCCAGTCTTCTTGGAATGA...GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAGAACCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR TCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGGCTCAAAGTCCACGATaGAAATGTTCCCTTGCTGGA +
Preference number: 2 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWAQSPR*KCSLAG
Trigger: TCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGC...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTCTGGCTGGGGCAGCTaGCCTTCCCACAGTGAGACT +
Preference number: 2 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSSGWGS*PSHSET
Trigger: AGTCTCACTGTGGGAAGGCCAGCTGCCCCAGCCAGA...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAAGGTTCTCCATCGCTTTaGAGTAATTCAGAACAAAGT +
Preference number: 2 (lower is better)
Translates to: LLVALSNHADNGLEVLAEGSPSL*SNSEQS
Trigger: ACTTTGTTCTGAATTACTCCAAAGCGATGGAGAACC...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGATGCTGAGCTGGGTGTaGACAGGACGCTGTGCAGTC +
Preference number: 2 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSMLSWV*TGRCAV
Trigger: GACTGCACAGCGTCCTGTCCACACCCAGCTCAGCAT...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGTGGAAATGCTGAGCTaGGTGTGGACAGGACGCTGT +
Preference number: 2 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSVEMLS*VWTGRC
Trigger: ACAGCGTCCTGTCCACACCCAGCTCAGCATTTCCAC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGCTGCTCTGTGTAGAATaGGTCCCTATGGTGTTTACA +
Preference number: 2 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWLLCVE*VPMVFT
Trigger: TGTAAACACCATAGGGACCCATTCTACACAGAGCAG...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR TCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCATGGTGTTTACACTTTaGTCAATCTATGCAGTTCCC +
Preference number: 2 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCMVFTL*SIYAVP
Trigger: GGGAACTGCATAGATTGATCAAAGTGTAAACACCAT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGAGATCAAAGAATAAATaGAAAGGTACTGGCCTCGGA +
Preference number: 2 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWRSKNK*KGTGLG
Trigger: TCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCAGATCAAAGAATAAATaGAAAGGTACTGGCCTCGGA +
Preference number: 2 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCRSKNK*KGTGLG
Trigger: TCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR TCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCATCTATGCAGTTCCCTaGAGATCAAAGAATAAATGG +
Preference number: 2 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCIYAVP*RSKNKW
Trigger: CCATTTATTCTTTGATCTTCAGGGAACTGCATAGAT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR TCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGATCTATGCAGTTCCCTaGAGATCAAAGAATAAATGG +
Preference number: 2 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSIYAVP*RSKNKW
Trigger: CCATTTATTCTTTGATCTTCAGGGAACTGCATAGAT...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR-3UTR GCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGACTTTGATCAATCTATaGAGTTCCCTGAAGATCAAA +
Preference number: 2 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSTLINL*SSLKIK
Trigger: TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGT...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR CCA 72 bp GGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATaGTCACCACGCCCTTGGCAGTCGGTGGCGGGGCTC +
Preference number: 3 (lower is better)
Translates to: GRGRAACPRSAQ*SPRPWQSVAGL
Trigger: GAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 72 bp CAGGAGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTaGTCAATGGTCACCACGCCCTTGGCAGTCGGTGGC +
Preference number: 3 (lower is better)
Translates to: QERPRSGSVSTI*SMVTTPLAVGG
Trigger: GCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 72 bp CAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTaGACCCAGATGCCAGCAGGAGCGGCCGCGGTCGGG +
Preference number: 3 (lower is better)
Translates to: QLVFLELAQRPH*TQMPAGAAAVG
Trigger: CCCGACCGCGGCCGCTCCTGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 72 bp GCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTTaGCAGTCGGTGGCGGGGCTCGCATGGTTGGGGGCG +
Preference number: 3 (lower is better)
Translates to: ACPRSAQWSPRP*QSVAGLAWLGA
Trigger: CGCCCCCAACCATGCGAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGACACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR TCA 72 bp CCACGGTCAGGTACTCCGACAGCTGCTCCCGGCTCTTaGCCGACTTGGGGAAGCCTGAGGACTTGCGGCCCC +
Preference number: 3 (lower is better)
Translates to: PRSGTPTAAPGS*PTWGSLRTCGP
Trigger: GGGGCCGCAAGTCCTCAGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGCTGTCGGAGTACCTGACCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 72 bp CACCAGTCGTACTGGCCGAAGTTGACCGCGGCGTGCTaGGCGGAGGCGGTGAAGATCACCACGGTCAGGTAC +
Preference number: 3 (lower is better)
Translates to: HQSYWPKLTAAC*AEAVKITTVRY
Trigger: GTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGCGGTCAACTTCGGCCAGTACGACTGGTG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 72 bp GTCAGGTCCTTCATGGCCCTCTGCACCATCTGCACGTaGCCACCGCCCCCTGTGGCGTTGGCCTTGTCAAAG +
Preference number: 3 (lower is better)
Translates to: VRSFMALCTICT*PPPPVALALSK
Trigger: CTTTGACAAGGCCAACGCCACAGGGGGCGGTGGGCACGTGCAGATGGTGCAGAGGGCCATGAAGGACCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp GCGGCGTGCTGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCAGCTGCTCACGGGCCTaGGTGTTGATTGCAATGGTG +
Preference number: 3 (lower is better)
Translates to: AACWAEAVKITTVRYSDSSCSRA*VLIAMV
Trigger: CACCATTGCAATCAACACCAAGGCCCGTGAGCAGCT...GCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp CAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGCACCGCCCCCTGTGGCGTaGGCCTTGTCAAAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: QLVFLELAQRPHCTQMPAPPPVA*ALSKRP
Trigger: TGGCCTCTTTGACAAGGCCAACGCCACAGGGGGCGG...TGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp CACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCCTTCACCCGCCCCCTGTGGCGTaGGCCTTGTCAAAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: HADNGLEVLAESGHGFLHPPPVA*ALSKRP
Trigger: TGGCCTCTTTGACAAGGCCAACGCCACAGGGGGCGG...GTGAAGGAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 72 bp TCTCCGTGGTCACCGGGAGCTTCTCGGGCAGCTCTGTaGAGCGCCGGATCAACACAGGGTTGCAGCCATTCA +
Preference number: 3 (lower is better)
Translates to: SPWSPGASRAAL*SAGSTQGCSHS
Trigger: TGAATGGCTGCAACCCTGTGTTGATCCGGCGCTGCACAGAGCTGCCCGAGAAGCTCCCGGTGACCACGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 72 bp GCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCTaGTCCCGGCTCTTGACCGACTTGGGGAAGCCTGAG +
Preference number: 3 (lower is better)
Translates to: AVKITTVRYSDS*SRLLTDLGKPE
Trigger: CTCAGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 72 bp ATGTTCCCTTGCTGGACCTCCTGCTCCAAGCTGAGCTaGCGCTCCAGGCTGCACTCTACCATCTCCGTGGTC +
Preference number: 3 (lower is better)
Translates to: MFPCWTSCSKLS*RSRLHSTISVV
Trigger: GACCACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGGGAACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 72 bp CCGACTTGGGGAAGCCTGAGGACTTGCGGCCCCGCATaGCGTACACGTAGACATCGTTCACGAAGTCCTGCA +
Preference number: 3 (lower is better)
Translates to: PTWGSLRTCGPA*RTRRHRSRSPA
Trigger: TGCAGGACTTCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCCCCAAGTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 72 bp GGGTACATGCCCAGGAACAGCTCGTTTTCCTGGAACTaGCTCAGCGCCCACACTGCACCCAGATGCCAGCAG +
Preference number: 3 (lower is better)
Translates to: GYMPRNSSFSWN*LSAHTAPRCQQ
Trigger: CTGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTTCCTGGGCATGTACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp TCCACGATCTGCTCAATGGTCACCACGCCCTTGGCAGTCGGTGGCGGGGCTCGCGCAATGGGGACAATCTaGTTGGCCAGGTTCTTATAC +
Preference number: 3 (lower is better)
Translates to: STICSMVTTPLAVGGGARAMGTI*LARFLY
Trigger: GTATAAGAACCTGGCCAACAAGATTGTCCCCATTGC...GCGAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp GTCCTCCTCCACCACCTGGTCGCCCTCGTAGTAGATGTCTACCACCTCGGCCGTCTCATCTCCCGGGATTaGGTTGAGCTGGATGGCAAT +
Preference number: 3 (lower is better)
Translates to: VLLHHLVALVVDVYHLGRLISRD*VELDGN
Trigger: ATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAG...ACGGCCGAGGTGGTAGACATCTACTACGAGGGCGACCAGGTGGTGGAGGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp CAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGCATGTGCCACCAGCAGCTaGAAAATGGGGTGCACAGCA +
Preference number: 3 (lower is better)
Translates to: QLVFLELAQRPHCTQMPACATSS*KMGCTA
Trigger: TGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACA...TGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp AGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGAAGTCCTGCACAGGGGTCTGTTTTGTaGGCATCGATGCCATCCAGC +
Preference number: 3 (lower is better)
Translates to: RTCGPACRTRRHRSRSPAQGSVL*ASMPSS
Trigger: GCTGGATGGCATCGATGCCAACAAAACAGACCCCTG...TGCAGGACTTCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp CACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCCTTCACGCAGCTGGCGGTACATaGCAATGCCAAAAACCTCAG +
Preference number: 3 (lower is better)
Translates to: HADNGLEVLAESGHGFLHAAGGT*QCQKPQ
Trigger: CTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTGC...GTGAAGGAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp GGAAGCCTGAGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGATCACGGGCCTTGGTGTaGATTGCAATGGTGAATCTC +
Preference number: 3 (lower is better)
Translates to: GSLRTCGPACRTRRHRSRSRALV*IAMVNL
Trigger: GAGATTCACCATTGCAATCAACACCAAGGCCCGTGA...TCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 72 bp ACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTaGAGGGGTCTGTTTTGTTGGCATCGATGCCATCCA +
Preference number: 3 (lower is better)
Translates to: TASRWERPGTGV*RGLFCWHRCHP
Trigger: TGGATGGCATCGATGCCAACAAAACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 72 bp CGGCCAGGAACTGGAGTGTGCAGGGGTCTGTTTTGTTaGCATCGATGCCATCCAGCAGCTCAAAGTCCACGA +
Preference number: 3 (lower is better)
Translates to: RPGTGVCRGLFC*HRCHPAAQSPR
Trigger: TCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAAACAGACCCCTGCACACTCCAGTTCCTGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 72 bp CTCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTaGAATGGTGAATCTCACGTGTGCCACCAGCAGCTT +
Preference number: 3 (lower is better)
Translates to: LADELLTGLGVD*NGESHVCHQQL
Trigger: AAGCTGCTGGTGGCACACGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 72 bp CAATCTTGTTGGCCAGGTTCTTATACAGCAAGCAGATaGGAGCGGCCAGGAACTGGAGTGTGCAGGGGTCTG +
Preference number: 3 (lower is better)
Translates to: QSCWPGSYTASR*ERPGTGVCRGL
Trigger: CAGACCCCTGCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAACCTGGCCAACAAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 72 bp GACACCAGATGTGTTCGCAGAAGGTGGGTGATGGTCTaGTGGACGTGGAAGTCACTGGAACGCACCCAGATT +
Preference number: 3 (lower is better)
Translates to: DTRCVRRRWVMV*WTWKSLERTQI
Trigger: AATCTGGGTGCGTTCCAGTGACTTCCACGTCCACCAGACCATCACCCACCTTCTGCGAACACATCTGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp TACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCAGGGGTCTGTTTTGGATGAAAATGTTCCCTaGCTGGACCTCCTGCTCCAA +
Preference number: 3 (lower is better)
Translates to: YSKQMGAARNWSVQGSVLDENVP*LDLLLQ
Trigger: TTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATC...CAAAACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAAGTGCAGGGGTCTGTTTaGTTGGCATCGATGCCATCC +
Preference number: 3 (lower is better)
Translates to: LLVALSNHADNGLEVLAEVQGSV*LASMPS
Trigger: GGATGGCATCGATGCCAACAAAACAGACCCCTGCAC...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp AGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGAAGTCCTGCAGCAATGGGGACAATCTaGTTGGCCAGGTTCTTATAC +
Preference number: 3 (lower is better)
Translates to: RTCGPACRTRRHRSRSPAAMGTI*LARFLY
Trigger: GTATAAGAACCTGGCCAACAAGATTGTCCCCATTGC...TGCAGGACTTCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp GTTCTTGCGGAATCGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAATGCTCTCTCCCGGGATTTGGTaGAGCTGGATGGCAATGGGG +
Preference number: 3 (lower is better)
Translates to: VLAESGHGFLHRLLDKMLSPGIW*SWMAMG
Trigger: CCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGA...GAGCATTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR TCA 72 bp AAACCTCAGACACCAGATGTGTTCGCAGAAGGTGGGTaGTGGTCTGGTGGACGTGGAAGTCACTGGAACGCA +
Preference number: 3 (lower is better)
Translates to: KPQTPDVFAEGG*WSGGRGSHWNA
Trigger: TGCGTTCCAGTGACTTCCACGTCCACCAGACCATCACCCACCTTCTGCGAACACATCTGGTGTCTGAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 72 bp GGCCTTGGTGTTGATTGCAATGGTGAATCTCACGTGTaGCACCAGCAGCTTGAAAATGGGGTGCACAGCAGG +
Preference number: 3 (lower is better)
Translates to: GLGVDCNGESHV*HQQLENGVHSR
Trigger: CCTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACACGTGAGATTCACCATTGCAATCAACACCAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 72 bp TGTGTTCGCAGAAGGTGGGTGATGGTCTGGTGGACGTaGAAGTCACTGGAACGCACCCAGATTTTGGCCAAA +
Preference number: 3 (lower is better)
Translates to: CVRRRWVMVWWT*KSLERTQILAK
Trigger: TTTGGCCAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCCACCAGACCATCACCCACCTTCTGCGAACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 72 bp ACCAGATGTGTTCGCAGAAGGTGGGTGATGGTCTGGTaGACGTGGAAGTCACTGGAACGCACCCAGATTTTG +
Preference number: 3 (lower is better)
Translates to: TRCVRRRWVMVW*TWKSLERTQIL
Trigger: CAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCCACCAGACCATCACCCACCTTCTGCGAACACATCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp CTCGGGAAAGCACAGGGAGGCATAGGTCAGGTCCTTCATGGCCCTCTGCACCATAAAGCCAGTCGTATTTaGCATCCGAAGGGAGGAAAA +
Preference number: 3 (lower is better)
Translates to: LGKAQGGIGQVLHGPLHHKASRI*HPKGGK
Trigger: TTTTCCTCCCTTCGGATGCAAAATACGACTGGCTTT...ATGGTGCAGAGGGCCATGAAGGACCTGACCTATGCCTCCCTGTGCTTTCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp ACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTCCTGTGGCGTTGGCCTaGTCAAAGAGGCCACACTCG +
Preference number: 3 (lower is better)
Translates to: TVRNPVWGQVVIWQLLLLPVALA*SKRPHS
Trigger: CGAGTGTGGCCTCTTTGACAAGGCCAACGCCACAGG...AAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 72 bp CGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAATaGTCTTCTGGGTACATGCCCAGGAACAGCTCGTTT +
Preference number: 3 (lower is better)
Translates to: RAMASFTGFSIK*SSGYMPRNSSF
Trigger: AAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 72 bp TTCTTATACAGCAAGCAGATGGGAGCGGCCAGGAACTaGAGTGTGCAGGGGTCTGTTTTGTTGGCATCGATG +
Preference number: 3 (lower is better)
Translates to: FLYSKQMGAARN*SVQGSVLLASM
Trigger: CATCGATGCCAACAAAACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp GAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTGTTGCGCTTGTGCCACCAGCAGCTaGAAAATGGGGTGCACAGCA +
Preference number: 3 (lower is better)
Translates to: ESGLGTSSNMAAASSCCACATSS*KMGCTA
Trigger: TGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACA...AGCGCAACAAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp GTGTGCCACCAGCAGCTTGAAAATGGGGTGCACAGCAGGCAGCTGGCGGTACATCGCTCAGAAATAGTGTaGCTGATCTTGACAAAGATT +
Preference number: 3 (lower is better)
Translates to: VCHQQLENGVHSRQLAVHRSEIV*LILTKI
Trigger: AATCTTTGTCAAGATCAGCAACACTATTTCTGAGCG...ATGTACCGCCAGCTGCCTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp GAGGAAAATAGGGTTCTCATCTCCCGGGATTTGGTTGAGCTGGATGGCAATGGGGATGAAAATGTTCCCTaGCTGGACCTCCTGCTCCAA +
Preference number: 3 (lower is better)
Translates to: EENRVLISRDLVELDGNGDENVP*LDLLLQ
Trigger: TTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATC...CCCATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAGAACCCTATTTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp ACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTAGCTGCTCACGGGCCTaGGTGTTGATTGCAATGGTG +
Preference number: 3 (lower is better)
Translates to: TVRNPVWGQVVIWQLLLLSCSRA*VLIAMV
Trigger: CACCATTGCAATCAACACCAAGGCCCGTGAGCAGCT...AAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp GAGGAAAATAGGGTTCTCATCTCCCGGGATTTGGTTGAGCTGGATGGCAATGGGATGTGCATGAAGCGGTaGATGAACAGGTTCTCCATC +
Preference number: 3 (lower is better)
Translates to: EENRVLISRDLVELDGNGMCMKR*MNRFSI
Trigger: GATGGAGAACCTGTTCATCAACCGCTTCATGCACAT...CCCATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAGAACCCTATTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 72 bp ACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATaGCAGCTGCTTCTTCTTGTTGCGCTCAGCAATCAC +
Preference number: 3 (lower is better)
Translates to: TVRNPVWGQVVI*QLLLLVALSNH
Trigger: GTGATTGCTGAGCGCAACAAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR GCA 72 bp AAGTCGGCGAAGTCATTCCAAGAAGACTGGAACATGTaGATGAAGCGGTTGATGAACAGGTTCTCCATCGCT +
Preference number: 3 (lower is better)
Translates to: KSAKSFQEDWNM*MKRLMNRFSIA
Trigger: AGCGATGGAGAACCTGTTCATCAACCGCTTCATGCACATGTTCCAGTCTTCTTGGAATGACTTCGCCGACTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CCA 72 bp ATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTaGAACATGTGCATGAAGCGGTTGATGAACAGGTTC +
Preference number: 3 (lower is better)
Translates to: IFSKSAKSFQED*NMCMKRLMNRF
Trigger: GAACCTGTTCATCAACCGCTTCATGCACATGTTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTATGGTGTTTACACTTaGATCAATCTATGCAGTTCC +
Preference number: 3 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSYGVYT*INLCSS
Trigger: GGAACTGCATAGATTGATCAAAGTGTAAACACCATA...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp AGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTCGTACTGGCCGAAGTTaGCCGCGGCGTGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: SGRGRAACPRSAQWSPRPRTGRS*PRRAGR
Trigger: CCGCCCAGCACGCCGCGGTCAACTTCGGCCAGTACG...AGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GCGGCGTGCTGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCTGCACCATCTGCACGTaGCCACCGCCCCCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: AACWAEAVKITTVRYSDSCTICT*PPPPVA
Trigger: CGCCACAGGGGGCGGTGGGCACGTGCAGATGGTGCA...GCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp AGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTTGGTCACCACGCCCTTaGCAGTCGGTGGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SGRGRAACPRSAQWSPRPWSPRP*QSVAGL
Trigger: GAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCA...AGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GCGGCGTGCTGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCGGCTTGTCCAGCAGGTaGTTCTCGCTGCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: AACWAEAVKITTVRYSDSGLSSR*FSLQPA
Trigger: GGCGGGCTGCAGCGAGAAGCACCTGCTGGACAAGCC...GCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp TGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCTGCTCCCGGGCCCTCTGCACCATCTaGACGTGCCCACCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: WAEAVKITTVRYSDSCSRALCTI*TCPPPP
Trigger: AGGGGGCGGTGGGCACGTGCAGATGGTGCAGAGGGC...CCGGGAGCAGCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp TGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCTGCTCCCGGGGCCACACTCGCAGATaGGCTGCTCACGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: WAEAVKITTVRYSDSCSRGHTRR*AAHGPW
Trigger: CCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGGCC...CCGGGAGCAGCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp CGCTCCAGGCTGCACTCTACCATCTCCGTGGTCACCGGGAGCTTCTCGGGCAGCGCTGGGCGGAGGCGGTaGAGATCACCACGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RSRLHSTISVVTGSFSGSAGRRR*RSPRSG
Trigger: ACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGC...GCTGCCCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGTGCAGCCTGGAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAACAGCTGGCCGAAGTTaGCCGCGGCGTGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQATAGRS*PRRAGR
Trigger: CCGCCCAGCACGCCGCGGTCAACTTCGGCCAGCTGT...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542434.5
ENST00000622021.4
3UTR CAA 72 bp AGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTaGGCAGTCGGTGGCGGGGCTCGCATGGTTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SVSTICSMVTTP*AVGGGARMVGG
Trigger: GCCCCCAACCATGCGAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GTCCTCCTCCACCACCTGGTCGCCCTCGTAGTAGATGTCTACCACCTCGGCCGTGCCCTCTGCACCATCTaGACGTGCCCACCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: VLLHHLVALVVDVYHLGRALCTI*TCPPPP
Trigger: AGGGGGCGGTGGGCACGTGCAGATGGTGCAGAGGGC...ACGGCCGAGGTGGTAGACATCTACTACGAGGGCGACCAGGTGGTGGAGGAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp TGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCTGCTCCCGGGGAAGCCTGAGGACTTaGGGCCCCGCATGCCGTACA +
Preference number: 4 (lower is better)
Translates to: WAEAVKITTVRYSDSCSRGSLRT*GPACRT
Trigger: TGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC...CCGGGAGCAGCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CGCTCCAGGCTGCACTCTACCATCTCCGTGGTCACCGGGAGCTTCTCGGGCAGCGCTCAGCGCCCACACTaGACCCAGATGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RSRLHSTISVVTGSFSGSAQRPH*TQMPAG
Trigger: TCCTGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGC...GCTGCCCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGTGCAGCCTGGAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp TCCACGATCTGCTCAATGGTCACCACGCCCTTGGCAGTCGGTGGCGGGGCTCGCGCCCACCGCCCCCTGTaGCGTTGGCCTTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: STICSMVTTPLAVGGGARAHRPL*RWPCQR
Trigger: TCTTTGACAAGGCCAACGCCACAGGGGGCGGTGGGC...GCGAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CAA 72 bp ACCACGGTCAGGTACTCCGACAGCTGCTCCCGGCTCTaGACCGACTTGGGGAAGCCTGAGGACTTGCGGCCC +
Preference number: 4 (lower is better)
Translates to: TTVRYSDSCSRL*TDLGKPEDLRP
Trigger: GGGCCGCAAGTCCTCAGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGCTGTCGGAGTACCTGACCGTGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp TCCACGATCTGCTCAATGGTCACCACGCCCTTGGCAGTCGGTGGCGGGGCTCGCCACAGTCACGTCGTATaGATCCACCGCGCCACGCTC +
Preference number: 4 (lower is better)
Translates to: STICSMVTTPLAVGGGARHSHVV*IHRATL
Trigger: GAGCGTGGCGCGGTGGATTCATACGACGTGACTGTG...GCGAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCACCTCGACATCGCCGGTaGTCCAGCGGTAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAPRHRR*SSGSRG
Trigger: TCCCCTGCTACCGCTGGATCACCGGCGATGTCGAGG...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp AGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTTTCGCAGAAGGTGGGTaGTGGTCTGGTGGACGTGGA +
Preference number: 4 (lower is better)
Translates to: SGRGRAACPRSAQWSPRPFAEGG*WSGGRG
Trigger: TCCACGTCCACCAGACCATCACCCACCTTCTGCGAA...AGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp ACCTCCTGCTCCAAGCTGAGCTGCCGCTCCAGGCTGCACTCTACCATCTCCGTGCGACTTGGGGAAGCCTaGGGACTTGCGGCCCCGCAT +
Preference number: 4 (lower is better)
Translates to: TSCSKLSCRSRLHSTISVRLGEA*GLAAPH
Trigger: ATGCGGGGCCGCAAGTCCTCAGGCTTCCCCAAGTCG...CACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp GTCCTCCTCCACCACCTGGTCGCCCTCGTAGTAGATGTCTACCACCTCGGCCGTGCTGGGCGGAGGCGGTaGAGATCACCACGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: VLLHHLVALVVDVYHLGRAGRRR*RSPRSG
Trigger: ACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGC...ACGGCCGAGGTGGTAGACATCTACTACGAGGGCGACCAGGTGGTGGAGGAGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp AGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTAGATGTAGTCGTCAGTaGCGGCGAACCACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGRGRAACPRSAQWSPRPRCSRQ*RRTTGC
Trigger: GCAGCCAGTGGTTCGCCGGCACTGACGACTACATCT...AGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GCACTCTACCATCTCCGTGGTCACCGGGAGCTTCTCGGGCAGCTCTGTGCAGCGCCTTGCTGGACCTCCTaGTCCAAGCTGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ALYHLRGHRELLGQLCAAPCWTS*SKLSCR
Trigger: GCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGG...CGCTGCACAGAGCTGCCCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp AGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTTCCTTCATGGCCCTCTaGACCATCTGCACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SGRGRAACPRSAQWSPRPSFMAL*TICTCP
Trigger: TGGGCACGTGCAGATGGTGCAGAGGGCCATGAAGGA...AGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp AGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTCCACGATCTGCTCAATaGTCACCACGCCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SGRGRAACPRSAQWSPRPPRSAQ*SPRPWQ
Trigger: CTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGG...AGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAGACTGCCAAGAGGCCTaGCCAGACAGCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQADCQEA*PDSLPG
Trigger: GCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTC...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GCGGCGTGCTGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCGGGGCGTCTTCAGCGTaGTGTACTTCAGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: AACWAEAVKITTVRYSDSGASSA*CTSGTS
Trigger: ACTGGTACCTGAAGTACATCACGCTGAAGACGCCCC...GCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GTGTGCCACCAGCAGCTTGAAAATGGGGTGCACAGCAGGCAGCTGGCGGTACATGCAGGTGCTTCTCGCTaGAGCCCGCCGAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: VCHQQLENGVHSRQLAVHAGASR*SPPSPR
Trigger: TCGTGGGCTCGGCGGGCTGCAGCGAGAAGCACCTGC...ATGTACCGCCAGCTGCCTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAGCTGCCGCTCCAGGCTaGACTCTACCATCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAAAAPG*TLPSPW
Trigger: CCACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGC...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CGCTCCAGGCTGCACTCTACCATCTCCGTGGTCACCGGGAGCTTCTCGGGCAGCCACTCGCAGATGAGCTaGTCACGGGCCTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: RSRLHSTISVVTGSFSGSHSQMS*SRALVL
Trigger: CAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTG...GCTGCCCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGTGCAGCCTGGAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp TGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCTGCTCCCGGCACTCGCAGATGAGCTaGTCACGGGCCTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: WAEAVKITTVRYSDSCSRHSQMS*SRALVL
Trigger: CAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTG...CCGGGAGCAGCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAGGAAGCCTGAGGACTTaGGGCCCCGCATGCCGTACA +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAGSLRT*GPACRT
Trigger: TGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTAACAGCTCGTTTTCCTaGAACTGGCTCAGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: SGRGRAACPRSAQWSPRPNSSFS*NWLSAH
Trigger: GTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTT...AGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAAGGCTGGAGTCCATCTaGCTGGGGCAGCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQARLESI*LGQLAF
Trigger: GAAGGCCAGCTGCCCCAGCCAGATGGACTCCAGCCT...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAATGCCCAGGAACAGCTaGCCGAAGTTGACCGCGGCG +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAMPRNS*PKLTAA
Trigger: CGCCGCGGTCAACTTCGGCCAGCTGTTCCTGGGCAT...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542434.5
ENST00000622021.4
CDS-3UTR TCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCACACAGTCACGTCGTATaGATCCACCGCGCCACGCTC +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAHSHVV*IHRATL
Trigger: GAGCGTGGCGCGGTGGATTCATACGACGTGACTGTG...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GAACAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCACCTCGACATCGCCGGTaGTCCAGCGGTAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: EQLVFLELAQRPHCTQMPPRHRR*SSGSRG
Trigger: TCCCCTGCTACCGCTGGATCACCGGCGATGTCGAGG...TGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GCACTCTACCATCTCCGTGGTCACCGGGAGCTTCTCGGGCAGCTCTGTGCAGCGAGATGTAGTCGTCAGTaGCGGCGAACCACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: ALYHLRGHRELLGQLCAARCSRQ*RRTTGC
Trigger: GCAGCCAGTGGTTCGCCGGCACTGACGACTACATCT...CGCTGCACAGAGCTGCCCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GAACAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGGCTTGTCCAGCAGGTaGTTCTCGCTGCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: EQLVFLELAQRPHCTQMPGLSSR*FSLQPA
Trigger: GGCGGGCTGCAGCGAGAAGCACCTGCTGGACAAGCC...TGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GGAAGCCTGAGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGACCTTGCTGGACCTCCTaGTCCAAGCTGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: GSLRTCGPACRTRRHRSRPCWTS*SKLSCR
Trigger: GCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGG...TCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCAGGGGTCTGTTTTGTTCACACTGCACCCAGATaGCAGCAGGAGCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: QQADGSGQELECAGVCFVHTAPR*QQERPR
Trigger: CCGCGGCCGCTCCTGCTGGCATCTGGGTGCAGTGTG...AACAAAACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAGGAGCGGCCAGGAACTaGAGTGTGCAGGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAGAARN*SVQGSV
Trigger: AACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCC...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCGCCCTTGGCAGTCGGTaGCGGGGCTCGCATGGTTGG +
Preference number: 4 (lower is better)
Translates to: SNHADNGLEVLAESGHGFALGSR*RGSHGW
Trigger: CCAACCATGCGAGCCCCGCCACCGACTGCCAAGGGC...GAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCATCTGGCTGGGGCAGCTaGCCTTCCCACAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQASGWGS*PSHSET
Trigger: AGTCTCACTGTGGGAAGGCCAGCTGCCCCAGCCAGA...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CGCTCCAGGCTGCACTCTACCATCTCCGTGGTCACCGGGAGCTTCTCGGGCAGCAGGTCTTCCTGCCAGTaGTTCATGACCCGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: RSRLHSTISVVTGSFSGSRSSCQ*FMTRSE
Trigger: TTCTGAGCGGGTCATGAATCACTGGCAGGAAGACCT...GCTGCCCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGTGCAGCCTGGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CGCTCCAGGCTGCACTCTACCATCTCCGTGGTCACCGGGAGCTTCTCGGGCAGCCCAGGAACTGGAGTGTaGAGGGGTCTGTTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RSRLHSTISVVTGSFSGSPGTGV*RGLFCW
Trigger: CCAACAAAACAGACCCCTGCACACTCCAGTTCCTGG...GCTGCCCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGTGCAGCCTGGAGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCACACTCGCAGATGAGCTaGTCACGGGCCTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAHSQMS*SRALVL
Trigger: CAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTG...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAAGCGTGTCCACGATCTaGTCAATGGTCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQASVSTI*SMVTTP
Trigger: GGGCGTGGTGACCATTGAGCAGATCGTGGACACGCT...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR GCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCATGGCCTCGAGGTTCTTaGGGAATCGGGCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAWPRGS*GIGPWL
Trigger: AAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCA...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCACTCTACCATCTCCGTGGTCACCGGGAGCTTCTCGGGCAGCTCTGTGCAGCGTCGATTCTGACCAGCTaGATCTCGCCCAGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: ALYHLRGHRELLGQLCAASILTS*ISPSSS
Trigger: CGAGGAACTGGGCGAGATCCAGCTGGTCAGAATCGA...CGCTGCACAGAGCTGCCCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAACTCTACCATCTCCGTaGTCACCGGGAGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQATLPSP*SPGASR
Trigger: CCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGT...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGCAGGAGCGGCCAGGAACTaGAGTGTGCAGGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: QLVFLELAQRPHCTQMPAGAARN*SVQGSV
Trigger: AACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCC...TGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp AGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTTCATCTCCCGGGATTTaGTTGAGCTGGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: SGRGRAACPRSAQWSPRPSSPGI*LSWMAM
Trigger: CATTGCCATCCAGCTCAACCAAATCCCGGGAGATGA...AGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp GAACAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGCCCACCGCCCCCTGTaGCGTTGGCCTTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: EQLVFLELAQRPHCTQMPAHRPL*RWPCQR
Trigger: TCTTTGACAAGGCCAACGCCACAGGGGGCGGTGGGC...TGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCCTTCACGAGCACCAGTCGTACTaGCCGAAGTTGACCGCGGCG +
Preference number: 4 (lower is better)
Translates to: HADNGLEVLAESGHGFLHEHQSY*PKLTAA
Trigger: CGCCGCGGTCAACTTCGGCCAGTACGACTGGTGCTC...GTGAAGGAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGCAGGTGCTTCTCGCTaGAGCCCGCCGAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGAGASR*SPPSPR
Trigger: TCGTGGGCTCGGCGGGCTGCAGCGAGAAGCACCTGC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCCTTCACTCTCGGGCAGCTCTGTaGAGCGCCGGATCAACACAG +
Preference number: 4 (lower is better)
Translates to: HADNGLEVLAESGHGFLHSRAAL*SAGSTQ
Trigger: CTGTGTTGATCCGGCGCTGCACAGAGCTGCCCGAGA...GTGAAGGAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CACTCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCTGCACCATCTGCACGTaGCCACCGCCCCCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: HSQMSCSRALVLIAMVNLCTICT*PPPPVA
Trigger: CGCCACAGGGGGCGGTGGGCACGTGCAGATGGTGCA...GAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAAGGTGGGTGATGGTCTaGTGGACGTGGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQARWVMV*WTWKSL
Trigger: CAGTGACTTCCACGTCCACCAGACCATCACCCACCT...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCATGCACAGCAGGCAGCTaGCGGTACATTGCAATGCCA +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQACTAGS*RYIAMP
Trigger: TGGCATTGCAATGTACCGCCAGCTGCCTGCTGTGCA...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCGGCGTGCTGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCGTTCGGAATCCGGTCTaGGGACAAGTAGTAATATGG +
Preference number: 4 (lower is better)
Translates to: AACWAEAVKITTVRYSDSVRNPV*GQVVIW
Trigger: CCATATTACTACTTGTCCCCAGACCGGATTCCGAAC...GCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAGTGGAAATGCTGAGCTaGGTGTGGACAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAVEMLS*VWTGRC
Trigger: ACAGCGTCCTGTCCACACCCAGCTCAGCATTTCCAC...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATGCCAGTGGCCACGGTaGCCGTGTAGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGCQWPR*PCRRAW
Trigger: CCATGCCCTCCTACACGGTCACCGTGGCCACTGGCA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp TACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCAGGGGTCTGTTTTGCACAGTCACGTCGTATaGATCCACCGCGCCACGCTC +
Preference number: 4 (lower is better)
Translates to: YSKQMGAARNWSVQGSVLHSHVV*IHRATL
Trigger: GAGCGTGGCGCGGTGGATTCATACGACGTGACTGTG...CAAAACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp AGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGAAGTCCTGCATGCGCTTCTCGATTCTaGCCAGCTGGATCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: RTCGPACRTRRHRSRSPACASRF*PAGSRP
Trigger: TGGGCGAGATCCAGCTGGTCAGAATCGAGAAGCGCA...TGCAGGACTTCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAAGGTCTTCCTGCCAGTaGTTCATGACCCGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQARSSCQ*FMTRSE
Trigger: TTCTGAGCGGGTCATGAATCACTGGCAGGAAGACCT...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp TGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCTGCTCCCGGGCTCAAAGTCCACGATaGAAATGTTCCCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: WAEAVKITTVRYSDSCSRAQSPR*KCSLAG
Trigger: TCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGC...CCGGGAGCAGCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp TCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCACGGGCCACACTCGCAGATaGGCTGCTCACGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: SQMSCSRALVLIAMVNLTGHTRR*AAHGPW
Trigger: CCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGGCC...CGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAACGACTTGGGGAAGCCTaGGGACTTGCGGCCCCGCAT +
Preference number: 4 (lower is better)
Translates to: LLVALSNHADNGLEVLAERLGEA*GLAAPH
Trigger: ATGCGGGGCCGCAAGTCCTCAGGCTTCCCCAAGTCG...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGCTGGGCGGAGGCGGTaGAGATCACCACGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGAGRRR*RSPRSG
Trigger: ACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGCAGGCATTTGGCATCGATaGTCAAGGGGAAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: QLVFLELAQRPHCTQMPAGIWHR*SRGSQG
Trigger: ACCCTGGCTTCCCCTTGAGCATCGATGCCAAATGCC...TGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp AGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCTCTCGGGCAGCTCTGTaGAGCGCCGGATCAACACAG +
Preference number: 4 (lower is better)
Translates to: SNHADNGLEVLAESGHGFSRAAL*SAGSTQ
Trigger: CTGTGTTGATCCGGCGCTGCACAGAGCTGCCCGAGA...GAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCACCAGGAACTGGAGTGTaGAGGGGTCTGTTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAPGTGV*RGLFCW
Trigger: CCAACAAAACAGACCCCTGCACACTCCAGTTCCTGG...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GTGTGCCACCAGCAGCTTGAAAATGGGGTGCACAGCAGGCAGCTGGCGGTACATAGCTTGAAAATGGGGTaGACAGCAGGCAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: VCHQQLENGVHSRQLAVHSLKMG*TAGSWR
Trigger: CCGCCAGCTGCCTGCTGTGCACCCCATTTTCAAGCT...ATGTACCGCCAGCTGCCTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCATATACAGCAAGCAGATaGGAGCGGCCAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAYTASR*ERPGTG
Trigger: TCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATA...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAGGACGTGGAAGTCACTaGAACGCACCCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAGRGSH*NAPRFW
Trigger: CCAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCC...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATTGACCGCGGCGTGCTaGGCGGAGGCGGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGLTAAC*AEAVKI
Trigger: GATCTTCACCGCCTCCGCCCAGCACGCCGCGGTCAA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GAGGAAAATAGGGTTCTCATCTCCCGGGATTTGGTTGAGCTGGATGGCAATGGGGCCCTTGGCAGTCGGTaGCGGGGCTCGCATGGTTGG +
Preference number: 4 (lower is better)
Translates to: EENRVLISRDLVELDGNGALGSR*RGSHGW
Trigger: CCAACCATGCGAGCCCCGCCACCGACTGCCAAGGGC...CCCATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAGAACCCTATTTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGACTGCCAAGAGGCCTaGCCAGACAGCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGDCQEA*PDSLPG
Trigger: GCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCCTTCACGGGGCGTCTTCAGCGTaGTGTACTTCAGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: HADNGLEVLAESGHGFLHGASSA*CTSGTS
Trigger: ACTGGTACCTGAAGTACATCACGCTGAAGACGCCCC...GTGAAGGAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp ATAGGGTTCTCATCTCCCGGGATTTGGTTGAGCTGGATGGCAATGGGGACAATCGCTGCTCCCGGCTCTTaGCCGACTTGGGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: IGFSSPGIWLSWMAMGTIAAPGS*PTWGSL
Trigger: CAGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGC...GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAGAACCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp TTTGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCCGTACTGGCCGAAGTTaGCCGCGGCGTGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: FVGIDAIQQLKVHDENVPRTGRS*PRRAGR
Trigger: CCGCCCAGCACGCCGCGGTCAACTTCGGCCAGTACG...GGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CACTCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCGCTGCCGCTCCAGGCTaGACTCTACCATCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: HSQMSCSRALVLIAMVNLAAAPG*TLPSPW
Trigger: CCACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGC...GAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GGAAGCCTGAGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGACCAGGAACTGGAGTGTaGAGGGGTCTGTTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: GSLRTCGPACRTRRHRSRPGTGV*RGLFCW
Trigger: CCAACAAAACAGACCCCTGCACACTCCAGTTCCTGG...TCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp AGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCTCCTTCATGGCCCTCTaGACCATCTGCACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SNHADNGLEVLAESGHGFSFMAL*TICTCP
Trigger: TGGGCACGTGCAGATGGTGCAGAGGGCCATGAAGGA...GAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp TGGCCAGGTTCTTATACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCACTTGCGGCCCCGCATaGCGTACACGTAGACATCGT +
Preference number: 4 (lower is better)
Translates to: WPGSYTASRWERPGTGVCTCGPA*RTRRHR
Trigger: ACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGT...GCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAACCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGGAAGCCTGAGGACTTaGGGCCCCGCATGCCGTACA +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGGSLRT*GPACRT
Trigger: TGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCCCGTGTAGGAGGGCATaGCGCGGGCCGCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAPCRRA*RGPREQ
Trigger: CTGCTCCCGCGGCCCGCGCCATGCCCTCCTACACGG...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGCCGTGTAGGAGGGCATaGCGCGGGCCGCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEPCRRA*RGPREQ
Trigger: CTGCTCCCGCGGCCCGCGCCATGCCCTCCTACACGG...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GAACAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCATGCACAGCAGGCAGCTaGCGGTACATTGCAATGCCA +
Preference number: 4 (lower is better)
Translates to: EQLVFLELAQRPHCTQMPCTAGS*RYIAMP
Trigger: TGGCATTGCAATGTACCGCCAGCTGCCTGCTGTGCA...TGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp AGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGAAGTCCTGCAAGGTCAGGTCCTTCATaGCCCTCTGCACCATCTGCA +
Preference number: 4 (lower is better)
Translates to: RTCGPACRTRRHRSRSPARSGPS*PSAPSA
Trigger: TGCAGATGGTGCAGAGGGCCATGAAGGACCTGACCT...TGCAGGACTTCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp GTTCTTGCGGAATCGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAATGCTCTTGACCGCGGCGTGCTaGGCGGAGGCGGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: VLAESGHGFLHRLLDKMLLTAAC*AEAVKI
Trigger: GATCTTCACCGCCTCCGCCCAGCACGCCGCGGTCAA...GAGCATTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCAAGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CAA 72 bp GGAGCGGCCAGGAACTGGAGTGTGCAGGGGTCTGTTTaGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: GAARNWSVQGSV*LASMPSSSSKS
Trigger: GGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAAACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CAA 72 bp CGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTaGCGGAATCGGGCCATGGCTTCCTTCACAGGCTTC +
Preference number: 4 (lower is better)
Translates to: RSAITLTMASRF*RNRAMASFTGF
Trigger: GAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGACACAGTCACGTCGTATaGATCCACCGCGCCACGCTC +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGHSHVV*IHRATL
Trigger: GAGCGTGGCGCGGTGGATTCATACGACGTGACTGTG...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGACTGGCCTTCCCACAGTaGGACTGGCAGTGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGLAFPQ*DWQCAQ
Trigger: CTGAGCACACTGCCAGTCTCACTGTGGGAAGGCCAG...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATCGGAGGAAGAGATGTaGCTGCCAAGAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGSEEEM*LPRGLA
Trigger: GGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGGCAGGTGCTTCTCGCTaGAGCCCGCCGAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWAGASR*SPPSPR
Trigger: TCGTGGGCTCGGCGGGCTGCAGCGAGAAGCACCTGC...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGTTCACGAAGTCCTaGAGCTCCGGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLVALSNHADNGLEVLAESFTKS*SSGSSS
Trigger: GGAGGAGGACCCGGAGCTGCAGGACTTCGTGAACGA...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp ACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTCACACTGCACCCAGATaGCAGCAGGAGCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: TVRNPVWGQVVIWQLLLLHTAPR*QQERPR
Trigger: CCGCGGCCGCTCCTGCTGGCATCTGGGTGCAGTGTG...AAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAGGCTTCTCGATAAAATaGTCTTCTGGGTACATGCCC +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAGFSIK*SSGYMP
Trigger: GGGCATGTACCCAGAAGAGCATTTTATCGAGAAGCC...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGCCGTGTAGGAGGGCATaGCGCGGGCCGCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEPCRRA*RGPREQ
Trigger: CTGCTCCCGCGGCCCGCGCCATGCCCTCCTACACGG...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCGGCGTGCTGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCGGTTCTCCATCGCTTTaGAGTAATTCAGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: AACWAEAVKITTVRYSDSGSPSL*SNSEQS
Trigger: ACTTTGTTCTGAATTACTCCAAAGCGATGGAGAACC...GCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp GTGTGCCACCAGCAGCTTGAAAATGGGGTGCACAGCAGGCAGCTGGCGGTACATGGACGTGGAAGTCACTaGAACGCACCCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: VCHQQLENGVHSRQLAVHGRGSH*NAPRFW
Trigger: CCAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCC...ATGTACCGCCAGCTGCCTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp GAAAATGTTCCCTTGCTGGACCTCCTGCTCCAAGCTGAGCTGCCGCTCCAGGCTGGACGTGGAAGTCACTaGAACGCACCCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: ENVPLLDLLLQAELPLQAGRGSH*NAPRFW
Trigger: CCAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCC...AGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp GAACAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCATGGGTGATGGTCTGGTaGACGTGGAAGTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: EQLVFLELAQRPHCTQMPWVMVW*TWKSLE
Trigger: TTCCAGTGACTTCCACGTCCACCAGACCATCACCCA...TGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCAGGGGTCTGTTTTGTTAGGTGGGTGATGGTCTaGTGGACGTGGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: QQADGSGQELECAGVCFVRWVMV*WTWKSL
Trigger: CAGTGACTTCCACGTCCACCAGACCATCACCCACCT...AACAAAACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CAA 72 bp CCACACTCGCAGATGAGCTGCTCACGGGCCTTGGTGTaGATTGCAATGGTGAATCTCACGTGTGCCACCAGC +
Preference number: 4 (lower is better)
Translates to: PHSQMSCSRALV*IAMVNLTCATS
Trigger: GCTGGTGGCACACGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp ACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTCCTCGACATCGCCGGTaGTCCAGCGGTAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: TVRNPVWGQVVIWQLLLLPRHRR*SSGSRG
Trigger: TCCCCTGCTACCGCTGGATCACCGGCGATGTCGAGG...AAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp TTTGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCGCTGCTCCCGGCTCTTaGCCGACTTGGGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: FVGIDAIQQLKVHDENVPAAPGS*PTWGSL
Trigger: CAGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGC...GGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCCGTACTGGCCGAAGTTaGCCGCGGCGTGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCRTGRS*PRRAGR
Trigger: CCGCCCAGCACGCCGCGGTCAACTTCGGCCAGTACG...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR GCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAAGATGTAGTCGTCAGTaGCGGCGAACCACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGRCSRQ*RRTTGC
Trigger: GCAGCCAGTGGTTCGCCGGCACTGACGACTACATCT...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AGCAGCTCAAAGTCCACGATGAAAATGTTCCCTTGCTGGACCTCCTGCTCCAAGTGCTCCAAGCTGAGCTaGCGCTCCAGGCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: SSSKSTMKMFPCWTSCSKCSKLS*RSRLHS
Trigger: AGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCA...CTTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCTGCACCATCTGCACGTaGCCACCGCCCCCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTACTICT*PPPPVA
Trigger: CGCCACAGGGGGCGGTGGGCACGTGCAGATGGTGCA...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGCCCTCTGCACCATCTaGACGTGCCCACCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEALCTI*TCPPPP
Trigger: AGGGGGCGGTGGGCACGTGCAGATGGTGCAGAGGGC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAAACTTGCGGCCCCGCATaGCGTACACGTAGACATCGT +
Preference number: 4 (lower is better)
Translates to: LLVALSNHADNGLEVLAETCGPA*RTRRHR
Trigger: ACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGT...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp TCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCACGTGGCCTCGAGGTTCTTaGGGAATCGGGCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: SQMSCSRALVLIAMVNLTWPRGS*GIGPWL
Trigger: AAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCA...CGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp GCGGCGTGCTGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCTTTTCACTATCAAACTaGATATCACGGGGTAAATCC +
Preference number: 4 (lower is better)
Translates to: AACWAEAVKITTVRYSDSFSLSN*ISRGKS
Trigger: GGATTTACCCCGTGATATCCAGTTTGATAGTGAAAA...GCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp TCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCACGACTCTACCATCTCCGTaGTCACCGGGAGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: SQMSCSRALVLIAMVNLTTLPSP*SPGASR
Trigger: CCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGT...CGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp AGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGAAGTCCTGCAAAAATGTTCCCTTGCTaGACCTCCTGCTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RTCGPACRTRRHRSRSPAKMFPC*TSCSKL
Trigger: CAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTT...TGCAGGACTTCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp GTTCTTGCGGAATCGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAATGCTCGGAGCGGCCAGGAACTaGAGTGTGCAGGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: VLAESGHGFLHRLLDKMLGAARN*SVQGSV
Trigger: AACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCC...GAGCATTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp TGGCCAGGTTCTTATACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCTATACAGCAAGCAGATaGGAGCGGCCAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: WPGSYTASRWERPGTGVCYTASR*ERPGTG
Trigger: TCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATA...GCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAACCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCATGGGGACAATCTTGTTaGCCAGGTTCTTATACAGCA +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAWGQSC*PGSYTA
Trigger: TGCTGTATAAGAACCTGGCCAACAAGATTGTCCCCA...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGCCCTTGGCAGTCGGTaGCGGGGCTCGCATGGTTGG +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEALGSR*RGSHGW
Trigger: CCAACCATGCGAGCCCCGCCACCGACTGCCAAGGGC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCACTGCTCTGTGTAGAATaGGTCCCTATGGTGTTTACA +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQALLCVE*VPMVFT
Trigger: TGTAAACACCATAGGGACCCATTCTACACAGAGCAG...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR CAA 72 bp AAGAGGCCACACTCGCAGATGAGCTGCTCACGGGCCTaGGTGTTGATTGCAATGGTGAATCTCACGTGTGCC +
Preference number: 4 (lower is better)
Translates to: KRPHSQMSCSRA*VLIAMVNLTCA
Trigger: GGCACACGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp GCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCTTGCTGGTGCGCTTCTCGATTCTaGCCAGCTGGATCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: ASMPSSSSKSTMKMFPCWCASRF*PAGSRP
Trigger: TGGGCGAGATCCAGCTGGTCAGAATCGAGAAGCGCA...CCAGCAAGGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGGGGCGTCTTCAGCGTaGTGTACTTCAGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGGASSA*CTSGTS
Trigger: ACTGGTACCTGAAGTACATCACGCTGAAGACGCCCC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCCCTCGACATCGCCGGTaGTCCAGCGGTAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAPRHRR*SSGSRG
Trigger: TCCCCTGCTACCGCTGGATCACCGGCGATGTCGAGG...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp AGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGAAGTCCTGCAGCTCAAAGTCCACGATaGAAATGTTCCCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RTCGPACRTRRHRSRSPAAQSPR*KCSLAG
Trigger: TCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGC...TGCAGGACTTCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp AGCAGCTCAAAGTCCACGATGAAAATGTTCCCTTGCTGGACCTCCTGCTCCAAGTTCGCAGAAGGTGGGTaGTGGTCTGGTGGACGTGGA +
Preference number: 4 (lower is better)
Translates to: SSSKSTMKMFPCWTSCSKFAEGG*WSGGRG
Trigger: TCCACGTCCACCAGACCATCACCCACCTTCTGCGAA...CTTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp AGCAGCTCAAAGTCCACGATGAAAATGTTCCCTTGCTGGACCTCCTGCTCCAAGGTGCCACCAGCAGCTTaGAAATGGGGTGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SSSKSTMKMFPCWTSCSKVPPAA*KWGAQQ
Trigger: CTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCAC...CTTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCGGCCACACTCGCAGATaGGCTGCTCACGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAGHTRR*AAHGPW
Trigger: CCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGGCC...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGCGACTTGGGGAAGCCTaGGGACTTGCGGCCCCGCAT +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEERLGEA*GLAAPH
Trigger: ATGCGGGGCCGCAAGTCCTCAGGCTTCCCCAAGTCG...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTCGTACTGGCCGAAGTTaGCCGCGGCGTGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSRTGRS*PRRAGR
Trigger: CCGCCCAGCACGCCGCGGTCAACTTCGGCCAGTACG...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR TCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTACAGCTGGCCGAAGTTaGCCGCGGCGTGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSTAGRS*PRRAGR
Trigger: CCGCCCAGCACGCCGCGGTCAACTTCGGCCAGCTGT...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542434.5
ENST00000622021.4
CDS-3UTR GCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGCAGGTGCTTCTCGCTaGAGCCCGCCGAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEAGASR*SPPSPR
Trigger: TCGTGGGCTCGGCGGGCTGCAGCGAGAAGCACCTGC...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGCAGGTGCTTCTCGCTaGAGCCCGCCGAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCAGASR*SPPSPR
Trigger: TCGTGGGCTCGGCGGGCTGCAGCGAGAAGCACCTGC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGCAGGTGCTTCTCGCTaGAGCCCGCCGAGCCCACGA +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEAGASR*SPPSPR
Trigger: TCGTGGGCTCGGCGGGCTGCAGCGAGAAGCACCTGC...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGGCTTGTCCAGCAGGTaGTTCTCGCTGCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEGLSSR*FSLQPA
Trigger: GGCGGGCTGCAGCGAGAAGCACCTGCTGGACAAGCC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGGCATTTGGCATCGATaGTCAAGGGGAAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGGIWHR*SRGSQG
Trigger: ACCCTGGCTTCCCCTTGAGCATCGATGCCAAATGCC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCCTTCACGGTGAATCTCACGTGTaGCACCAGCAGCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: HADNGLEVLAESGHGFLHGESHV*HQQLEN
Trigger: ATTTTCAAGCTGCTGGTGGCACACGTGAGATTCACC...GTGAAGGAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTGCACCATCTGCACGTaGCCACCGCCCCCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWCTICT*PPPPVA
Trigger: CGCCACAGGGGGCGGTGGGCACGTGCAGATGGTGCA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGTGCACCATCTGCACGTaGCCACCGCCCCCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASECTICT*PPPPVA
Trigger: CGCCACAGGGGGCGGTGGGCACGTGCAGATGGTGCA...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGCCCTCTGCACCATCTaGACGTGCCCACCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCALCTI*TCPPPP
Trigger: AGGGGGCGGTGGGCACGTGCAGATGGTGCAGAGGGC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGCCCTCTGCACCATCTaGACGTGCCCACCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEALCTI*TCPPPP
Trigger: AGGGGGCGGTGGGCACGTGCAGATGGTGCAGAGGGC...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCTTGCTGGTGGCCTCGAGGTTCTTaGGGAATCGGGCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: ASMPSSSSKSTMKMFPCWWPRGS*GIGPWL
Trigger: AAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCA...CCAGCAAGGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGCCTGGCCAGACAGCCTaGCAGGCAGGCTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEPGQTA*QAGWSP
Trigger: TGGACTCCAGCCTGCCTGGCAGGCTGTCTGGCCAGG...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGTGGACAGGACGCTGTaGAGTCCTGCTCTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGVDRTL*SPALCR
Trigger: TCTACACAGAGCAGGACTGCACAGCGTCCTGTCCAC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGGTGCCGGCGAACCACTaGCTGCCAGTGGCCACGGTG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWVPANH*LPVATV
Trigger: CACCGTGGCCACTGGCAGCCAGTGGTTCGCCGGCAC...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATCGATTCTGACCAGCTaGATCTCGCCCAGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGSILTS*ISPSSS
Trigger: CGAGGAACTGGGCGAGATCCAGCTGGTCAGAATCGA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GAACAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAAATCCTTGTGGCATTTaGCATCGATGCTCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: EQLVFLELAQRPHCTQMPNPCGI*HRCSRG
Trigger: TCCCCTTGAGCATCGATGCCAAATGCCACAAGGATT...TGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp TGGCCAGGTTCTTATACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCCGGGGTAAATCCTTGTaGCATTTGGCATCGATGCTC +
Preference number: 4 (lower is better)
Translates to: WPGSYTASRWERPGTGVCRGKSL*HLASML
Trigger: GAGCATCGATGCCAAATGCCACAAGGATTTACCCCG...GCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAACCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGCATGGGGACAATCTTGTTaGCCAGGTTCTTATACAGCA +
Preference number: 4 (lower is better)
Translates to: QLVFLELAQRPHCTQMPAWGQSC*PGSYTA
Trigger: TGCTGTATAAGAACCTGGCCAACAAGATTGTCCCCA...TGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATGTGTTCGCAGAAGGTaGGTGATGGTCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGCVRRR*VMVWWT
Trigger: CGTCCACCAGACCATCACCCACCTTCTGCGAACACA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGGCCCTTGGCAGTCGGTaGCGGGGCTCGCATGGTTGG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWALGSR*RGSHGW
Trigger: CCAACCATGCGAGCCCCGCCACCGACTGCCAAGGGC...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CCA 90 bp AGCAGCTCAAAGTCCACGATGAAAATGTTCCCTTGCTGGACCTCCTGCTCCAAGCCACGATCTGCTCAATaGTCACCACGCCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SSSKSTMKMFPCWTSCSKPRSAQ*SPRPWQ
Trigger: CTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGG...CTTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp TCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCACGTGCGGAATCGGGCCATaGCTTCCTTCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SQMSCSRALVLIAMVNLTCGIGP*LPSQAS
Trigger: AGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCA...CGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGCCTGCCAGGCAGGCTaGAGTCCATCTGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCACQAG*SPSGWG
Trigger: GCCCCAGCCAGATGGACTCCAGCCTGCCTGGCAGGC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCGACTGCCAAGAGGCCTaGCCAGACAGCCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTADCQEA*PDSLPG
Trigger: GCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTC...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAATGCCAGTGGCCACGGTaGCCGTGTAGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEECQWPR*PCRRAW
Trigger: CCATGCCCTCCTACACGGTCACCGTGGCCACTGGCA...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGCCTCGACATCGCCGGTaGTCCAGCGGTAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWPRHRR*SSGSRG
Trigger: TCCCCTGCTACCGCTGGATCACCGGCGATGTCGAGG...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGCCTCGACATCGCCGGTaGTCCAGCGGTAGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEPRHRR*SSGSRG
Trigger: TCCCCTGCTACCGCTGGATCACCGGCGATGTCGAGG...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGGCCACACTCGCAGATaGGCTGCTCACGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEGHTRR*AAHGPW
Trigger: CCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGGCC...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGCCATGCCCCGGGCCTTaGTGGCCTCGGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWPCPGP*WPREST
Trigger: TGTGCTTTCCCGAGGCCATCAAGGCCCGGGGCATGG...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAACCATGCCCCGGGCCTTaGTGGCCTCGGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEPCPGP*WPREST
Trigger: TGTGCTTTCCCGAGGCCATCAAGGCCCGGGGCATGG...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCCCATGCCCCGGGCCTTaGTGGCCTCGGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCPCPGP*WPREST
Trigger: TGTGCTTTCCCGAGGCCATCAAGGCCCGGGGCATGG...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CTGCCAGTGATTCATGACCCGCTCAGAAATAGTGTTGCTGATCTTGACAAAGATCCATGCCCCGGGCCTTaGTGGCCTCGGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: LPVIHDPLRNSVADLDKDPCPGP*WPREST
Trigger: TGTGCTTTCCCGAGGCCATCAAGGCCCGGGGCATGG...ATCTTTGTCAAGATCAGCAACACTATTTCTGAGCGGGTCATGAATCACTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAACGACTTGGGGAAGCCTaGGGACTTGCGGCCCCGCAT +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEERLGEA*GLAAPH
Trigger: ATGCGGGGCCGCAAGTCCTCAGGCTTCCCCAAGTCG...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGCTGCTCCCGGCTCTTaGCCGACTTGGGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEAAPGS*PTWGSL
Trigger: CAGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGC...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGCTGCTCCCGGCTCTTaGCCGACTTGGGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCAAPGS*PTWGSL
Trigger: CAGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGCTGCTCCCGGCTCTTaGCCGACTTGGGGAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEAAPGS*PTWGSL
Trigger: CAGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGC...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGCTGGGCGGAGGCGGTaGAGATCACCACGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCAGRRR*RSPRSG
Trigger: ACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCTTGCTGGGCTCAGCAATCACGCTaGCAATGGCCTCGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ASMPSSSSKSTMKMFPCWAQQSR*QWPRGS
Trigger: AGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGC...CCAGCAAGGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp ATAGGGTTCTCATCTCCCGGGATTTGGTTGAGCTGGATGGCAATGGGGACAATCGCTCAGCAATCACGCTaGCAATGGCCTCGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: IGFSSPGIWLSWMAMGTIAQQSR*QWPRGS
Trigger: AGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGC...GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAGAACCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAATGGTGTTTACACTTTaGTCAATCTATGCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAMVFTL*SIYAVP
Trigger: GGGAACTGCATAGATTGATCAAAGTGTAAACACCAT...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TTTGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCTGCTCCAAGCTGAGCTaGCGCTCCAGGCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: FVGIDAIQQLKVHDENVPCSKLS*RSRLHS
Trigger: AGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCA...GGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp TGGCCAGGTTCTTATACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCGGTGAATCTCACGTGTaGCACCAGCAGCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: WPGSYTASRWERPGTGVCGESHV*HQQLEN
Trigger: ATTTTCAAGCTGCTGGTGGCACACGTGAGATTCACC...GCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAACCTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTGCACCATCTGCACGTaGCCACCGCCCCCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSCTICT*PPPPVA
Trigger: CGCCACAGGGGGCGGTGGGCACGTGCAGATGGTGCA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TTTGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCTCGTTCACGAAGTCCTaGAGCTCCGGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FVGIDAIQQLKVHDENVPSFTKS*SSGSSS
Trigger: GGAGGAGGACCCGGAGCTGCAGGACTTCGTGAACGA...GGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp TTTGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCAGGTACTCCGACAGCTaGTCCCGGCTCTTGACCGAC +
Preference number: 4 (lower is better)
Translates to: FVGIDAIQQLKVHDENVPRYSDS*SRLLTD
Trigger: GTCGGTCAAGAGCCGGGAGCAGCTGTCGGAGTACCT...GGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp ACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTAGGTACTCCGACAGCTaGTCCCGGCTCTTGACCGAC +
Preference number: 4 (lower is better)
Translates to: TVRNPVWGQVVIWQLLLLRYSDS*SRLLTD
Trigger: GTCGGTCAAGAGCCGGGAGCAGCTGTCGGAGTACCT...AAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGTGAGACTGGCAGTGTaGTCAGATGGCCACACTGTT +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGVRLAV*SDGHTV
Trigger: AACAGTGTGGCCATCTGAGCACACTGCCAGTCTCAC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAACCTGGCCAGACAGCCTaGCAGGCAGGCTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEPGQTA*QAGWSP
Trigger: TGGACTCCAGCCTGCCTGGCAGGCTGTCTGGCCAGG...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGCCGTGTAGGAGGGCATaGCGCGGGCCGCGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSPCRRA*RGPREQ
Trigger: CTGCTCCCGCGGCCCGCGCCATGCCCTCCTACACGG...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GAAAATGTTCCCTTGCTGGACCTCCTGCTCCAAGCTGAGCTGCCGCTCCAGGCTTCATTCCAAGAAGACTaGAACATGTGCATGAAGCGG +
Preference number: 4 (lower is better)
Translates to: ENVPLLDLLLQAELPLQASFQED*NMCMKR
Trigger: CCGCTTCATGCACATGTTCCAGTCTTCTTGGAATGA...AGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp GAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTGTTGCGCTACTCTACCATCTCCGTaGTCACCGGGAGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: ESGLGTSSNMAAASSCCATLPSP*SPGASR
Trigger: CCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGT...AGCGCAACAAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATATACAGCAAGCAGATaGGAGCGGCCAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGYTASR*ERPGTG
Trigger: TCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGGACGTGGAAGTCACTaGAACGCACCCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGGRGSH*NAPRFW
Trigger: CCAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAATGGGTGATGGTCTGGTaGACGTGGAAGTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: LLVALSNHADNGLEVLAEWVMVW*TWKSLE
Trigger: TTCCAGTGACTTCCACGTCCACCAGACCATCACCCA...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGCCCACCGCCCCCTGTaGCGTTGGCCTTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEAHRPL*RWPCQR
Trigger: TCTTTGACAAGGCCAACGCCACAGGGGGCGGTGGGC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGACCGCGGCGTGCTaGGCGGAGGCGGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCLTAAC*AEAVKI
Trigger: GATCTTCACCGCCTCCGCCCAGCACGCCGCGGTCAA...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTGGTCACCACGCCCTTaGCAGTCGGTGGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSWSPRP*QSVAGL
Trigger: GAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CCA 90 bp GCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCTTGCTGGTCGTTTTCCTGGAACTaGCTCAGCGCCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: ASMPSSSSKSTMKMFPCWSFSWN*LSAHTA
Trigger: TGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGA...CCAGCAAGGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CTCGGGAAAGCACAGGGAGGCATAGGTCAGGTCCTTCATGGCCCTCTGCACCATGATAAAATGCTCTTCTaGGTACATGCCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: LGKAQGGIGQVLHGPLHHDKMLF*VHAQEQ
Trigger: CTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATC...ATGGTGCAGAGGGCCATGAAGGACCTGACCTATGCCTCCCTGTGCTTTCCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp TGGCCAGGTTCTTATACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCGTTCGGAATCCGGTCTaGGGACAAGTAGTAATATGG +
Preference number: 4 (lower is better)
Translates to: WPGSYTASRWERPGTGVCVRNPV*GQVVIW
Trigger: CCATATTACTACTTGTCCCCAGACCGGATTCCGAAC...GCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAACCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAAGATCAAAGAATAAATaGAAAGGTACTGGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQARSKNK*KGTGLG
Trigger: TCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR CAA 72 bp TGGTGGACGTGGAAGTCACTGGAACGCACCCAGATTTaGGCCAAAAGCCAGTCGTATTTTGCATCCGAAGGG +
Preference number: 4 (lower is better)
Translates to: WWTWKSLERTQI*AKSQSYFASEG
Trigger: CCCTTCGGATGCAAAATACGACTGGCTTTTGGCCAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTGCCAGTGGCCACGGTaGCCGTGTAGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSCQWPR*PCRRAW
Trigger: CCATGCCCTCCTACACGGTCACCGTGGCCACTGGCA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTGCTGGGCGGAGGCGGTaGAGATCACCACGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSAGRRR*RSPRSG
Trigger: ACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGC...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TGGCCAGGTTCTTATACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCGAAGACTGGAACATGTaGATGAAGCGGTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: WPGSYTASRWERPGTGVCEDWNM*MKRLMN
Trigger: GTTCATCAACCGCTTCATGCACATGTTCCAGTCTTC...GCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAACCTGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGTCTCGGGCAGCTCTGTaGAGCGCCGGATCAACACAG +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEESRAAL*SAGSTQ
Trigger: CTGTGTTGATCCGGCGCTGCACAGAGCTGCCCGAGA...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGGCTGCCGCTCCAGGCTaGACTCTACCATCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWAAAPG*TLPSPW
Trigger: CCACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGC...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGCTGCCGCTCCAGGCTaGACTCTACCATCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCAAAPG*TLPSPW
Trigger: CCACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCTGCTCCAAGCTGAGCTaGCGCTCCAGGCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTACSKLS*RSRLHS
Trigger: AGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCA...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCCCTTGCTGGACCTCCTaGTCCAAGCTGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCPCWTS*SKLSCR
Trigger: GCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGG...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGCCTTGCTGGACCTCCTaGTCCAAGCTGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWPCWTS*SKLSCR
Trigger: GCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGG...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGCCTTGCTGGACCTCCTaGTCCAAGCTGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEPCWTS*SKLSCR
Trigger: GCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGG...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TTTGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCAGCTTGAAAATGGGGTaGACAGCAGGCAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: FVGIDAIQQLKVHDENVPSLKMG*TAGSWR
Trigger: CCGCCAGCTGCCTGCTGTGCACCCCATTTTCAAGCT...GGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCTCGTTCACGAAGTCCTaGAGCTCCGGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTASFTKS*SSGSSS
Trigger: GGAGGAGGACCCGGAGCTGCAGGACTTCGTGAACGA...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGGAAGCCTGAGGACTTaGGGCCCCGCATGCCGTACA +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCGSLRT*GPACRT
Trigger: TGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAACACACTGCACCCAGATaGCAGCAGGAGCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKHTAPR*QQERPR
Trigger: CCGCGGCCGCTCCTGCTGGCATCTGGGTGCAGTGTG...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR GCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGCTCAGCGCCCACACTaGACCCAGATGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEAQRPH*TQMPAG
Trigger: TCCTGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGC...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR GCA 90 bp CTGCCAGTGATTCATGACCCGCTCAGAAATAGTGTTGCTGATCTTGACAAAGATGCTCAGCGCCCACACTaGACCCAGATGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LPVIHDPLRNSVADLDKDAQRPH*TQMPAG
Trigger: TCCTGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGC...ATCTTTGTCAAGATCAGCAACACTATTTCTGAGCGGGTCATGAATCACTGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTCCTGGCCAGACAGCCTaGCAGGCAGGCTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSPGQTA*QAGWSP
Trigger: TGGACTCCAGCCTGCCTGGCAGGCTGTCTGGCCAGG...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCATTTTCACTATCAAACTaGATATCACGGGGTAAATCC +
Preference number: 4 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAFSLSN*ISRGKS
Trigger: GGATTTACCCCGTGATATCCAGTTTGATAGTGAAAA...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACCTCCTGCTCCAAGCTGAGCTGCCGCTCCAGGCTGCACTCTACCATCTCCGTGTTTTCACTATCAAACTaGATATCACGGGGTAAATCC +
Preference number: 4 (lower is better)
Translates to: TSCSKLSCRSRLHSTISVFSLSN*ISRGKS
Trigger: GGATTTACCCCGTGATATCCAGTTTGATAGTGAAAA...CACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CACTCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCAAAATGTTCCCTTGCTaGACCTCCTGCTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: HSQMSCSRALVLIAMVNLKMFPC*TSCSKL
Trigger: CAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTT...GAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAAGGGGTCTGTTTTGTTaGCATCGATGCCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGRGLFC*HRCHPA
Trigger: TGCTGGATGGCATCGATGCCAACAAAACAGACCCCT...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATCATCTCCCGGGATTTaGTTGAGCTGGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGSSPGI*LSWMAM
Trigger: CATTGCCATCCAGCTCAACCAAATCCCGGGAGATGA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTGTTGCGCTTGCACAGCAGGCAGCTaGCGGTACATTGCAATGCCA +
Preference number: 4 (lower is better)
Translates to: ESGLGTSSNMAAASSCCACTAGS*RYIAMP
Trigger: TGGCATTGCAATGTACCGCCAGCTGCCTGCTGTGCA...AGCGCAACAAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGGCCCACCGCCCCCTGTaGCGTTGGCCTTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWAHRPL*RWPCQR
Trigger: TCTTTGACAAGGCCAACGCCACAGGGGGCGGTGGGC...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTTGACCGCGGCGTGCTaGGCGGAGGCGGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSLTAAC*AEAVKI
Trigger: GATCTTCACCGCCTCCGCCCAGCACGCCGCGGTCAA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAGCACCAGTCGTACTaGCCGAAGTTGACCGCGGCG +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEEHQSY*PKLTAA
Trigger: CGCCGCGGTCAACTTCGGCCAGTACGACTGGTGCTC...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATGGTCACCACGCCCTTaGCAGTCGGTGGCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKWSPRP*QSVAGL
Trigger: GAGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGAGGCTGGAGTCCATCTaGCTGGGGCAGCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASERLESI*LGQLAF
Trigger: GAAGGCCAGCTGCCCCAGCCAGATGGACTCCAGCCT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGATGCCCAGGAACAGCTaGCCGAAGTTGACCGCGGCG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWMPRNS*PKLTAA
Trigger: CGCCGCGGTCAACTTCGGCCAGCTGTTCCTGGGCAT...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542434.5
ENST00000622021.4
CDS-3UTR TCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATGCCAGTGGCCACGGTaGCCGTGTAGGAGGGCATGG +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKCQWPR*PCRRAW
Trigger: CCATGCCCTCCTACACGGTCACCGTGGCCACTGGCA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGCACAGTCACGTCGTATaGATCCACCGCGCCACGCTC +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWHSHVV*IHRATL
Trigger: GAGCGTGGCGCGGTGGATTCATACGACGTGACTGTG...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCCACAGTCACGTCGTATaGATCCACCGCGCCACGCTC +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCHSHVV*IHRATL
Trigger: GAGCGTGGCGCGGTGGATTCATACGACGTGACTGTG...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGCTCAAAGTCCACGATaGAAATGTTCCCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGAQSPR*KCSLAG
Trigger: TCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGTGCCACCAGCAGCTTaGAAATGGGGTGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEVPPAA*KWGAQQ
Trigger: CTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCAC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCGTGCCACCAGCAGCTTaGAAATGGGGTGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAVPPAA*KWGAQQ
Trigger: CTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCAC...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGGCCACACTCGCAGATaGGCTGCTCACGGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKGHTRR*AAHGPW
Trigger: CCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGGCC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GATCTTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTGGAACCATGCCCCGGGCCTTaGTGGCCTCGGGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: DLDKDFLKVGEVIPRRLEPCPGP*WPREST
Trigger: TGTGCTTTCCCGAGGCCATCAAGGCCCGGGGCATGG...TTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGCTGGGCGGAGGCGGTaGAGATCACCACGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKAGRRR*RSPRSG
Trigger: ACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCCTGGCCTTCCCACAGTaGGACTGGCAGTGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCLAFPQ*DWQCAQ
Trigger: CTGAGCACACTGCCAGTCTCACTGTGGGAAGGCCAG...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAATCGGAGGAAGAGATGTaGCTGCCAAGAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEESEEEM*LPRGLA
Trigger: GGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGA...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGTCGGAGGAAGAGATGTaGCTGCCAAGAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASESEEEM*LPRGLA
Trigger: GGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGA...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTCGGAGGAAGAGATGTaGCTGCCAAGAGGCCTGGCC +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCSEEEM*LPRGLA
Trigger: GGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGA...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGAGATGTAGTCGTCAGTaGCGGCGAACCACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEERCSRQ*RRTTGC
Trigger: GCAGCCAGTGGTTCGCCGGCACTGACGACTACATCT...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTCTCGGGCAGCTCTGTaGAGCGCCGGATCAACACAG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWSRAAL*SAGSTQ
Trigger: CTGTGTTGATCCGGCGCTGCACAGAGCTGCCCGAGA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTCTCGGGCAGCTCTGTaGAGCGCCGGATCAACACAG +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCSRAAL*SAGSTQ
Trigger: CTGTGTTGATCCGGCGCTGCACAGAGCTGCCCGAGA...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CAGGTTCTCCATCGCTTTGGAGTAATTCAGAACAAAGTCCACTCCTTTTTCACTGCTGCCGCTCCAGGCTaGACTCTACCATCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: QVLHRFGVIQNKVHSFFTAAAPG*TLPSPW
Trigger: CCACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGC...AGTGAAAAAGGAGTGGACTTTGTTCTGAATTACTCCAAAGCGATGGAGAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAATGCTCCAAGCTGAGCTaGCGCTCCAGGCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEECSKLS*RSRLHS
Trigger: AGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCA...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGTGCTCCAAGCTGAGCTaGCGCTCCAGGCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASECSKLS*RSRLHS
Trigger: AGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCA...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTCCTTGCTGGACCTCCTaGTCCAAGCTGAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSPCWTS*SKLSCR
Trigger: GCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGG...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGGCCTTGGTGTTGATTaGAATGGTGAATCTCACGTG +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGGLGVD*NGESHV
Trigger: CACGTGAGATTCACCATTGCAATCAACACCAAGGCC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGAGGGGATGTCTTCTTTaGTCTCCATGCCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEERGCLL*SPCPGP
Trigger: AGGCCCGGGGCATGGAGAGCAAAGAAGACATCCCCT...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GTGCATGAAGCGGTTGATGAACAGGTTCTCCATCGCTTTGGAGTAATTCAGAACAGGGGATGTCTTCTTTaGTCTCCATGCCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: VHEAVDEQVLHRFGVIQNRGCLL*SPCPGP
Trigger: AGGCCCGGGGCATGGAGAGCAAAGAAGACATCCCCT...GTTCTGAATTACTCCAAAGCGATGGAGAACCTGTTCATCAACCGCTTCATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTCGTTCACGAAGTCCTaGAGCTCCGGGTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWSFTKS*SSGSSS
Trigger: GGAGGAGGACCCGGAGCTGCAGGACTTCGTGAACGA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCACTTGCGGCCCCGCATaGCGTACACGTAGACATCGT +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTATCGPA*RTRRHR
Trigger: ACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGT...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTGGAAGCCTGAGGACTTaGGGCCCCGCATGCCGTACA +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSGSLRT*GPACRT
Trigger: TGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CAGGTTCTCCATCGCTTTGGAGTAATTCAGAACAAAGTCCACTCCTTTTTCACTGGAAGCCTGAGGACTTaGGGCCCCGCATGCCGTACA +
Preference number: 4 (lower is better)
Translates to: QVLHRFGVIQNKVHSFFTGSLRT*GPACRT
Trigger: TGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC...AGTGAAAAAGGAGTGGACTTTGTTCTGAATTACTCCAAAGCGATGGAGAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGAGGTACTCCGACAGCTaGTCCCGGCTCTTGACCGAC +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASERYSDS*SRLLTD
Trigger: GTCGGTCAAGAGCCGGGAGCAGCTGTCGGAGTACCT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAAGGTACTCCGACAGCTaGTCCCGGCTCTTGACCGAC +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEERYSDS*SRLLTD
Trigger: GTCGGTCAAGAGCCGGGAGCAGCTGTCGGAGTACCT...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCAGCGTGTCCACGATCTaGTCAATGGTCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTASVSTI*SMVTTP
Trigger: GGGCGTGGTGACCATTGAGCAGATCGTGGACACGCT...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR GCA 90 bp GTCTGTTTTGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATAGCGTGTCCACGATCTaGTCAATGGTCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: VCFVGIDAIQQLKVHDENSVSTI*SMVTTP
Trigger: GGGCGTGGTGACCATTGAGCAGATCGTGGACACGCT...ATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAAACAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGCACACTGCACCCAGATaGCAGCAGGAGCGGCCGCGG +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSHTAPR*QQERPR
Trigger: CCGCGGCCGCTCCTGCTGGCATCTGGGTGCAGTGTG...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR GCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTGCTCAGCGCCCACACTaGACCCAGATGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSAQRPH*TQMPAG
Trigger: TCCTGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGC...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR GCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAACCTGGCCAGACAGCCTaGCAGGCAGGCTGGAGTCCA +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKPGQTA*QAGWSP
Trigger: TGGACTCCAGCCTGCCTGGCAGGCTGTCTGGCCAGG...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGTCGTGATTTGCTGTTaGTGCTTGGTGTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGVVICC*CLVWKC
Trigger: GCATTTCCACACCAAGCAGCAACAGCAAATCACGAC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAAATCCTTGTGGCATTTaGCATCGATGCTCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGNPCGI*HRCSRG
Trigger: TCCCCTTGAGCATCGATGCCAAATGCCACAAGGATT...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCTTGCTGGCGGGGTAAATCCTTGTaGCATTTGGCATCGATGCTC +
Preference number: 4 (lower is better)
Translates to: ASMPSSSSKSTMKMFPCWRGKSL*HLASML
Trigger: GAGCATCGATGCCAAATGCCACAAGGATTTACCCCG...CCAGCAAGGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCCTTCACGGTTCTCCATCGCTTTaGAGTAATTCAGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: HADNGLEVLAESGHGFLHGSPSL*SNSEQS
Trigger: ACTTTGTTCTGAATTACTCCAAAGCGATGGAGAACC...GTGAAGGAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGACTCTACCATCTCCGTaGTCACCGGGAGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEETLPSP*SPGASR
Trigger: CCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGT...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCACTCTACCATCTCCGTaGTCACCGGGAGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTATLPSP*SPGASR
Trigger: CCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGT...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGGGAGCGGCCAGGAACTaGAGTGTGCAGGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWGAARN*SVQGSV
Trigger: AACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCC...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GTTCTTGCGGAATCGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAATGCTCGGGATTTGGTTGAGCTaGATGGCAATGGGGACAATC +
Preference number: 4 (lower is better)
Translates to: VLAESGHGFLHRLLDKMLGIWLS*MAMGTI
Trigger: GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCC...GAGCATTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCAAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp TTTGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCATGGTCTGGTGGACGTaGAAGTCACTGGAACGCACC +
Preference number: 4 (lower is better)
Translates to: FVGIDAIQQLKVHDENVPMVWWT*KSLERT
Trigger: GGTGCGTTCCAGTGACTTCCACGTCCACCAGACCAT...GGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp ACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTTGTGTTCGCAGAAGGTaGGTGATGGTCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: TVRNPVWGQVVIWQLLLLCVRRR*VMVWWT
Trigger: CGTCCACCAGACCATCACCCACCTTCTGCGAACACA...AAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGTGTGTTCGCAGAAGGTaGGTGATGGTCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWCVRRR*VMVWWT
Trigger: CGTCCACCAGACCATCACCCACCTTCTGCGAACACA...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTGCCCACCGCCCCCTGTaGCGTTGGCCTTGTCAAAGA +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSAHRPL*RWPCQR
Trigger: TCTTTGACAAGGCCAACGCCACAGGGGGCGGTGGGC...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTGGAACATGTTGACCGCGGCGTGCTaGGCGGAGGCGGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: LTKIFSKSAKSFQEDWNMLTAAC*AEAVKI
Trigger: GATCTTCACCGCCTCCGCCCAGCACGCCGCGGTCAA...CATGTTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CAGGTTCTCCATCGCTTTGGAGTAATTCAGAACAAAGTCCACTCCTTTTTCACTGAGCACCAGTCGTACTaGCCGAAGTTGACCGCGGCG +
Preference number: 4 (lower is better)
Translates to: QVLHRFGVIQNKVHSFFTEHQSY*PKLTAA
Trigger: CGCCGCGGTCAACTTCGGCCAGTACGACTGGTGCTC...AGTGAAAAAGGAGTGGACTTTGTTCTGAATTACTCCAAAGCGATGGAGAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGCCACGATCTGCTCAATaGTCACCACGCCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEPRSAQ*SPRPWQ
Trigger: CTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGG...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGAACAGCTCGTTTTCCTaGAACTGGCTCAGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWNSSFS*NWLSAH
Trigger: GTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTT...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCCTTCACGGACAAGTAGTAATATaGCAGCTGCTTCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: HADNGLEVLAESGHGFLHGQVVI*QLLLLV
Trigger: AACAAGAAGAAGCAGCTGCCATATTACTACTTGTCC...GTGAAGGAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGTCTGGCTGGGGCAGCTaGCCTTCCCACAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASESGWGS*PSHSET
Trigger: AGTCTCACTGTGGGAAGGCCAGCTGCCCCAGCCAGA...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTCTGGCTGGGGCAGCTaGCCTTCCCACAGTGAGACT +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCSGWGS*PSHSET
Trigger: AGTCTCACTGTGGGAAGGCCAGCTGCCCCAGCCAGA...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGCCTGCCAGGCAGGCTaGAGTCCATCTGGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSACQAG*SPSGWG
Trigger: GCCCCAGCCAGATGGACTCCAGCCTGCCTGGCAGGC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGCTGAGCTGGGTGTaGACAGGACGCTGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEMLSWV*TGRCAV
Trigger: GACTGCACAGCGTCCTGTCCACACCCAGCTCAGCAT...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAATGCGCTTCTCGATTCTaGCCAGCTGGATCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEECASRF*PAGSRP
Trigger: TGGGCGAGATCCAGCTGGTCAGAATCGAGAAGCGCA...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGTGCGCTTCTCGATTCTaGCCAGCTGGATCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASECASRF*PAGSRP
Trigger: TGGGCGAGATCCAGCTGGTCAGAATCGAGAAGCGCA...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCGGGGCGTCTTCAGCGTaGTGTACTTCAGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAGASSA*CTSGTS
Trigger: ACTGGTACCTGAAGTACATCACGCTGAAGACGCCCC...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGTTCGCAGAAGGTGGGTaGTGGTCTGGTGGACGTGGA +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEFAEGG*WSGGRG
Trigger: TCCACGTCCACCAGACCATCACCCACCTTCTGCGAA...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTTCGCAGAAGGTGGGTaGTGGTCTGGTGGACGTGGA +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWFAEGG*WSGGRG
Trigger: TCCACGTCCACCAGACCATCACCCACCTTCTGCGAA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTCGCAGAAGGTGGGTaGTGGTCTGGTGGACGTGGA +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCFAEGG*WSGGRG
Trigger: TCCACGTCCACCAGACCATCACCCACCTTCTGCGAA...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGTGCCACCAGCAGCTTaGAAATGGGGTGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEVPPAA*KWGAQQ
Trigger: CTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCAC...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGCGACTTGGGGAAGCCTaGGGACTTGCGGCCCCGCAT +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSRLGEA*GLAAPH
Trigger: ATGCGGGGCCGCAAGTCCTCAGGCTTCCCCAAGTCG...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGCTCAGCAATCACGCTaGCAATGGCCTCGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEAQQSR*QWPRGS
Trigger: AGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCAGATGTAGTCGTCAGTaGCGGCGAACCACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCRCSRQ*RRTTGC
Trigger: GCAGCCAGTGGTTCGCCGGCACTGACGACTACATCT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGGCTTGTCCAGCAGGTaGTTCTCGCTGCAGCCCGCC +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSGLSSR*FSLQPA
Trigger: GGCGGGCTGCAGCGAGAAGCACCTGCTGGACAAGCC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGAAGACTGGAACATGTaGATGAAGCGGTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGEDWNM*MKRLMN
Trigger: GTTCATCAACCGCTTCATGCACATGTTCCAGTCTTC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGCTGCCGCTCCAGGCTaGACTCTACCATCTCCGTGG +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKAAAPG*TLPSPW
Trigger: CCACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCTTGCTGGCAGCTGGCGGTACATTaGAATGCCAAAAACCTCAGA +
Preference number: 4 (lower is better)
Translates to: ASMPSSSSKSTMKMFPCWQLAVH*NAKNLR
Trigger: TCTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTG...CCAGCAAGGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGAGCTTGAAAATGGGGTaGACAGCAGGCAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWSLKMG*TAGSWR
Trigger: CCGCCAGCTGCCTGCTGTGCACCCCATTTTCAAGCT...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAAGCTTGAAAATGGGGTaGACAGCAGGCAGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEESLKMG*TAGSWR
Trigger: CCGCCAGCTGCCTGCTGTGCACCCCATTTTCAAGCT...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGCACTCGCAGATGAGCTaGTCACGGGCCTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWHSQMS*SRALVL
Trigger: CAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTG...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGTCCTTCATGGCCCTCTaGACCATCTGCACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASESFMAL*TICTCP
Trigger: TGGGCACGTGCAGATGGTGCAGAGGGCCATGAAGGA...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGAGGGGATGTCTTCTTTaGTCTCCATGCCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWRGCLL*SPCPGP
Trigger: AGGCCCGGGGCATGGAGAGCAAAGAAGACATCCCCT...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTAGGTACTCCGACAGCTaGTCCCGGCTCTTGACCGAC +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSRYSDS*SRLLTD
Trigger: GTCGGTCAAGAGCCGGGAGCAGCTGTCGGAGTACCT...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CTGCCAGTGATTCATGACCCGCTCAGAAATAGTGTTGCTGATCTTGACAAAGATAGCGTGTCCACGATCTaGTCAATGGTCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: LPVIHDPLRNSVADLDKDSVSTI*SMVTTP
Trigger: GGGCGTGGTGACCATTGAGCAGATCGTGGACACGCT...ATCTTTGTCAAGATCAGCAACACTATTTCTGAGCGGGTCATGAATCACTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTGGCCTCGAGGTTCTTaGGGAATCGGGCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWWPRGS*GIGPWL
Trigger: AAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTGGCCTCGAGGTTCTTaGGGAATCGGGCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCWPRGS*GIGPWL
Trigger: AAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCA...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGTCGATTCTGACCAGCTaGATCTCGCCCAGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEESILTS*ISPSSS
Trigger: CGAGGAACTGGGCGAGATCCAGCTGGTCAGAATCGA...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GTGCATGAAGCGGTTGATGAACAGGTTCTCCATCGCTTTGGAGTAATTCAGAACTCGATTCTGACCAGCTaGATCTCGCCCAGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: VHEAVDEQVLHRFGVIQNSILTS*ISPSSS
Trigger: CGAGGAACTGGGCGAGATCCAGCTGGTCAGAATCGA...GTTCTGAATTACTCCAAAGCGATGGAGAACCTGTTCATCAACCGCTTCATGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCACTCTACCATCTCCGTaGTCACCGGGAGCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCTLPSP*SPGASR
Trigger: CCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTGGAGCGGCCAGGAACTaGAGTGTGCAGGGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSGAARN*SVQGSV
Trigger: AACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCC...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGTATACAGCAAGCAGATaGGAGCGGCCAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWYTASR*ERPGTG
Trigger: TCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATA...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATGGGGACAATCTTGTTaGCCAGGTTCTTATACAGCA +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGWGQSC*PGSYTA
Trigger: TGCTGTATAAGAACCTGGCCAACAAGATTGTCCCCA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAAAACGCACCCAGATTTTaGCCAAAAGCCAGTCGTATT +
Preference number: 4 (lower is better)
Translates to: LLVALSNHADNGLEVLAENAPRF*PKASRI
Trigger: AATACGACTGGCTTTTGGCCAAAATCTGGGTGCGTT...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCATGGTCTGGTGGACGTaGAAGTCACTGGAACGCACC +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAMVWWT*KSLERT
Trigger: GGTGCGTTCCAGTGACTTCCACGTCCACCAGACCAT...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GTCTGTTTTGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATATGGTCTGGTGGACGTaGAAGTCACTGGAACGCACC +
Preference number: 4 (lower is better)
Translates to: VCFVGIDAIQQLKVHDENMVWWT*KSLERT
Trigger: GGTGCGTTCCAGTGACTTCCACGTCCACCAGACCAT...ATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAAACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGAGGTGGGTGATGGTCTaGTGGACGTGGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEERWVMV*WTWKSL
Trigger: CAGTGACTTCCACGTCCACCAGACCATCACCCACCT...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCTGCACAGCAGGCAGCTaGCGGTACATTGCAATGCCA +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTACTAGS*RYIAMP
Trigger: TGGCATTGCAATGTACCGCCAGCTGCCTGCTGTGCA...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTTGACCGCGGCGTGCTaGGCGGAGGCGGTGAAGATC +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSLTAAC*AEAVKI
Trigger: GATCTTCACCGCCTCCGCCCAGCACGCCGCGGTCAA...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGCCACGATCTGCTCAATaGTCACCACGCCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEPRSAQ*SPRPWQ
Trigger: CTGCCAAGGGCGTGGTGACCATTGAGCAGATCGTGG...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCTCGTTTTCCTGGAACTaGCTCAGCGCCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTASFSWN*LSAHTA
Trigger: TGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGA...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGAACAGCTCGTTTTCCTaGAACTGGCTCAGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEENSSFS*NWLSAH
Trigger: GTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTT...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGATAAAATGCTCTTCTaGGTACATGCCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGDKMLF*VHAQEQ
Trigger: CTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCTGCGGAATCGGGCCATaGCTTCCTTCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTACGIGP*LPSQAS
Trigger: AGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCA...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGTGCGGAATCGGGCCATaGCTTCCTTCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEECGIGP*LPSQAS
Trigger: AGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCA...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGGCAGTGTGCTCAGATaGCCACACTGTTCGGAATCC +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEGSVLR*PHCSES
Trigger: GGATTCCGAACAGTGTGGCCATCTGAGCACACTGCC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCGGCAGTGTGCTCAGATaGCCACACTGTTCGGAATCC +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAGSVLR*PHCSES
Trigger: GGATTCCGAACAGTGTGGCCATCTGAGCACACTGCC...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCATGCTGAGCTGGGTGTaGACAGGACGCTGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCMLSWV*TGRCAV
Trigger: GACTGCACAGCGTCCTGTCCACACCCAGCTCAGCAT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGATGCTGAGCTGGGTGTaGACAGGACGCTGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWMLSWV*TGRCAV
Trigger: GACTGCACAGCGTCCTGTCCACACCCAGCTCAGCAT...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGTGGAAATGCTGAGCTaGGTGTGGACAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEVEMLS*VWTGRC
Trigger: ACAGCGTCCTGTCCACACCCAGCTCAGCATTTCCAC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR CAA 72 bp ATTTGGTTGAGCTGGATGGCAATGGGGACAATCTTGTaGGCCAGGTTCTTATACAGCAAGCAGATGGGAGCG +
Preference number: 4 (lower is better)
Translates to: IWLSWMAMGTIL*ARFLYSKQMGA
Trigger: CGCTCCCATCTGCTTGCTGTATAAGAACCTGGCCAACAAGATTGTCCCCATTGCCATCCAGCTCAACCAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
3UTR CAA 72 bp GGGATTTGGTTGAGCTGGATGGCAATGGGGACAATCTaGTTGGCCAGGTTCTTATACAGCAAGCAGATGGGA +
Preference number: 4 (lower is better)
Translates to: GIWLSWMAMGTI*LARFLYSKQMG
Trigger: TCCCATCTGCTTGCTGTATAAGAACCTGGCCAACAAGATTGTCCCCATTGCCATCCAGCTCAACCAAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGGGGCGTCTTCAGCGTaGTGTACTTCAGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEGASSA*CTSGTS
Trigger: ACTGGTACCTGAAGTACATCACGCTGAAGACGCCCC...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTGTGCCACCAGCAGCTTaGAAATGGGGTGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSVPPAA*KWGAQQ
Trigger: CTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCAC...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CAGGTTCTCCATCGCTTTGGAGTAATTCAGAACAAAGTCCACTCCTTTTTCACTGTGCCACCAGCAGCTTaGAAATGGGGTGCACAGCAG +
Preference number: 4 (lower is better)
Translates to: QVLHRFGVIQNKVHSFFTVPPAA*KWGAQQ
Trigger: CTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCAC...AGTGAAAAAGGAGTGGACTTTGTTCTGAATTACTCCAAAGCGATGGAGAACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGCTCAGCAATCACGCTaGCAATGGCCTCGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCAQQSR*QWPRGS
Trigger: AGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGGCATTTGGCATCGATaGTCAAGGGGAAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEGIWHR*SRGSQG
Trigger: ACCCTGGCTTCCCCTTGAGCATCGATGCCAAATGCC...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CTGCCAGTGATTCATGACCCGCTCAGAAATAGTGTTGCTGATCTTGACAAAGATGGCATTTGGCATCGATaGTCAAGGGGAAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LPVIHDPLRNSVADLDKDGIWHR*SRGSQG
Trigger: ACCCTGGCTTCCCCTTGAGCATCGATGCCAAATGCC...ATCTTTGTCAAGATCAGCAACACTATTTCTGAGCGGGTCATGAATCACTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCTTGCTGGTTTTGTTGGCATCGATaGCATCCAGCAGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: ASMPSSSSKSTMKMFPCWFCWHR*HPAAQS
Trigger: ACTTTGAGCTGCTGGATGGCATCGATGCCAACAAAA...CCAGCAAGGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp AGCAGCTCAAAGTCCACGATGAAAATGTTCCCTTGCTGGACCTCCTGCTCCAAGTTTTGTTGGCATCGATaGCATCCAGCAGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: SSSKSTMKMFPCWTSCSKFCWHR*HPAAQS
Trigger: ACTTTGAGCTGCTGGATGGCATCGATGCCAACAAAA...CTTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCCCAGGAACTGGAGTGTaGAGGGGTCTGTTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAPGTGV*RGLFCW
Trigger: CCAACAAAACAGACCCCTGCACACTCCAGTTCCTGG...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTGTTGCGCTCAGCTGGCGGTACATTaGAATGCCAAAAACCTCAGA +
Preference number: 4 (lower is better)
Translates to: ESGLGTSSNMAAASSCCAQLAVH*NAKNLR
Trigger: TCTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTG...AGCGCAACAAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTCACTCGCAGATGAGCTaGTCACGGGCCTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSHSQMS*SRALVL
Trigger: CAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTG...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCTTCATGGCCCTCTaGACCATCTGCACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSSFMAL*TICTCP
Trigger: TGGGCACGTGCAGATGGTGCAGAGGGCCATGAAGGA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTAGGGGATGTCTTCTTTaGTCTCCATGCCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSRGCLL*SPCPGP
Trigger: AGGCCCGGGGCATGGAGAGCAAAGAAGACATCCCCT...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTACTTGCGGCCCCGCATaGCGTACACGTAGACATCGT +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSTCGPA*RTRRHR
Trigger: ACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGT...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCGTGAGACTGGCAGTGTaGTCAGATGGCCACACTGTT +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAVRLAV*SDGHTV
Trigger: AACAGTGTGGCCATCTGAGCACACTGCCAGTCTCAC...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGTGGACAGGACGCTGTaGAGTCCTGCTCTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEVDRTL*SPALCR
Trigger: TCTACACAGAGCAGGACTGCACAGCGTCCTGTCCAC...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGGTGGACAGGACGCTGTaGAGTCCTGCTCTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWVDRTL*SPALCR
Trigger: TCTACACAGAGCAGGACTGCACAGCGTCCTGTCCAC...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGTCGATTCTGACCAGCTaGATCTCGCCCAGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASESILTS*ISPSSS
Trigger: CGAGGAACTGGGCGAGATCCAGCTGGTCAGAATCGA...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTAGGGGTCTGTTTTGTTaGCATCGATGCCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: TVRNPVWGQVVIWQLLLLRGLFC*HRCHPA
Trigger: TGCTGGATGGCATCGATGCCAACAAAACAGACCCCT...AAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGATGGTCTGGTGGACGTaGAAGTCACTGGAACGCACC +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWMVWWT*KSLERT
Trigger: GGTGCGTTCCAGTGACTTCCACGTCCACCAGACCAT...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAATGGTCTGGTGGACGTaGAAGTCACTGGAACGCACC +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEMVWWT*KSLERT
Trigger: GGTGCGTTCCAGTGACTTCCACGTCCACCAGACCAT...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGTGGGTGATGGTCTGGTaGACGTGGAAGTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEWVMVW*TWKSLE
Trigger: TTCCAGTGACTTCCACGTCCACCAGACCATCACCCA...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGAGGTGGGTGATGGTCTaGTGGACGTGGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWRWVMV*WTWKSL
Trigger: CAGTGACTTCCACGTCCACCAGACCATCACCCACCT...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTGTGTTCGCAGAAGGTaGGTGATGGTCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWCVRRR*VMVWWT
Trigger: CGTCCACCAGACCATCACCCACCTTCTGCGAACACA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTGCACAGCAGGCAGCTaGCGGTACATTGCAATGCCA +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCCTAGS*RYIAMP
Trigger: TGGCATTGCAATGTACCGCCAGCTGCCTGCTGTGCA...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGTGCACAGCAGGCAGCTaGCGGTACATTGCAATGCCA +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASECTAGS*RYIAMP
Trigger: TGGCATTGCAATGTACCGCCAGCTGCCTGCTGTGCA...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCAGGTCAGGTCCTTCATaGCCCTCTGCACCATCTGCA +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCRSGPS*PSAPSA
Trigger: TGCAGATGGTGCAGAGGGCCATGAAGGACCTGACCT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGAGGTCAGGTCCTTCATaGCCCTCTGCACCATCTGCA +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASERSGPS*PSAPSA
Trigger: TGCAGATGGTGCAGAGGGCCATGAAGGACCTGACCT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGAGCACCAGTCGTACTaGCCGAAGTTGACCGCGGCG +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSEHQSY*PKLTAA
Trigger: CGCCGCGGTCAACTTCGGCCAGTACGACTGGTGCTC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTCGTTTTCCTGGAACTaGCTCAGCGCCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWSFSWN*LSAHTA
Trigger: TGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CCA 90 bp CTGCCAGTGATTCATGACCCGCTCAGAAATAGTGTTGCTGATCTTGACAAAGATTCGTTTTCCTGGAACTaGCTCAGCGCCCACACTGCA +
Preference number: 4 (lower is better)
Translates to: LPVIHDPLRNSVADLDKDSFSWN*LSAHTA
Trigger: TGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGA...ATCTTTGTCAAGATCAGCAACACTATTTCTGAGCGGGTCATGAATCACTGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTGCGGAATCGGGCCATaGCTTCCTTCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWCGIGP*LPSQAS
Trigger: AGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGGCAGTGTGCTCAGATaGCCACACTGTTCGGAATCC +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEGSVLR*PHCSES
Trigger: GGATTCCGAACAGTGTGGCCATCTGAGCACACTGCC...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGAGGCTGGAGTCCATCTaGCTGGGGCAGCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSRLESI*LGQLAF
Trigger: GAAGGCCAGCTGCCCCAGCCAGATGGACTCCAGCCT...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGTGGAAATGCTGAGCTaGGTGTGGACAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEVEMLS*VWTGRC
Trigger: ACAGCGTCCTGTCCACACCCAGCTCAGCATTTCCAC...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGCCGAGCCCACGAGGCTaGGGTAGATGTAGTCGTCAG +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSPSPRG*GRCSRQ
Trigger: CTGACGACTACATCTACCTCAGCCTCGTGGGCTCGG...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATGCGCTTCTCGATTCTaGCCAGCTGGATCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKCASRF*PAGSRP
Trigger: TGGGCGAGATCCAGCTGGTCAGAATCGAGAAGCGCA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTGGGGCGTCTTCAGCGTaGTGTACTTCAGGTACCAGT +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSGASSA*CTSGTS
Trigger: ACTGGTACCTGAAGTACATCACGCTGAAGACGCCCC...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGAGGTCTTCCTGCCAGTaGTTCATGACCCGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASERSSCQ*FMTRSE
Trigger: TTCTGAGCGGGTCATGAATCACTGGCAGGAAGACCT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGCTGGCCTTCCCACAGTaGGACTGGCAGTGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSLAFPQ*DWQCAQ
Trigger: CTGAGCACACTGCCAGTCTCACTGTGGGAAGGCCAG...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTGGCATTTGGCATCGATaGTCAAGGGGAAGCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSGIWHR*SRGSQG
Trigger: ACCCTGGCTTCCCCTTGAGCATCGATGCCAAATGCC...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGCCAGGAACTGGAGTGTaGAGGGGTCTGTTTTGTTGG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWPGTGV*RGLFCW
Trigger: CCAACAAAACAGACCCCTGCACACTCCAGTTCCTGG...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGGGCCTTGGTGTTGATTaGAATGGTGAATCTCACGTG +
Preference number: 4 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWGLGVD*NGESHV
Trigger: CACGTGAGATTCACCATTGCAATCAACACCAAGGCC...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATCCTTCATGGCCCTCTaGACCATCTGCACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKSFMAL*TICTCP
Trigger: TGGGCACGTGCAGATGGTGCAGAGGGCCATGAAGGA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GATCTTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTGGAAAGGGGATGTCTTCTTTaGTCTCCATGCCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: DLDKDFLKVGEVIPRRLERGCLL*SPCPGP
Trigger: AGGCCCGGGGCATGGAGAGCAAAGAAGACATCCCCT...TTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp ACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTGGCTTCTCGATAAAATaGTCTTCTGGGTACATGCCC +
Preference number: 4 (lower is better)
Translates to: TVRNPVWGQVVIWQLLLLGFSIK*SSGYMP
Trigger: GGGCATGTACCCAGAAGAGCATTTTATCGAGAAGCC...AAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATGGCCTCGAGGTTCTTaGGGAATCGGGCCATGGCTT +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKWPRGS*GIGPWL
Trigger: AAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGGTGAGACTGGCAGTGTaGTCAGATGGCCACACTGTT +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWVRLAV*SDGHTV
Trigger: AACAGTGTGGCCATCTGAGCACACTGCCAGTCTCAC...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TTTGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCAATCCTTGTGGCATTTaGCATCGATGCTCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: FVGIDAIQQLKVHDENVPNPCGI*HRCSRG
Trigger: TCCCCTTGAGCATCGATGCCAAATGCCACAAGGATT...GGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGCGGGGTAAATCCTTGTaGCATTTGGCATCGATGCTC +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEERGKSL*HLASML
Trigger: GAGCATCGATGCCAAATGCCACAAGGATTTACCCCG...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGGTTCTCCATCGCTTTaGAGTAATTCAGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGGSPSL*SNSEQS
Trigger: ACTTTGTTCTGAATTACTCCAAAGCGATGGAGAACC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGAAAATGTTCCCTTGCTaGACCTCCTGCTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEKMFPC*TSCSKL
Trigger: CAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTT...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGAGGGGTCTGTTTTGTTaGCATCGATGCCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEERGLFC*HRCHPA
Trigger: TGCTGGATGGCATCGATGCCAACAAAACAGACCCCT...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAATATACAGCAAGCAGATaGGAGCGGCCAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEYTASR*ERPGTG
Trigger: TCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATA...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCTCATCTCCCGGGATTTaGTTGAGCTGGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTASSPGI*LSWMAM
Trigger: CATTGCCATCCAGCTCAACCAAATCCCGGGAGATGA...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGTGGGTGATGGTCTGGTaGACGTGGAAGTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEWVMVW*TWKSLE
Trigger: TTCCAGTGACTTCCACGTCCACCAGACCATCACCCA...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTGGGTGATGGTCTGGTaGACGTGGAAGTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCWVMVW*TWKSLE
Trigger: TTCCAGTGACTTCCACGTCCACCAGACCATCACCCA...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTGTGTTCGCAGAAGGTaGGTGATGGTCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSCVRRR*VMVWWT
Trigger: CGTCCACCAGACCATCACCCACCTTCTGCGAACACA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTAACAGCTCGTTTTCCTaGAACTGGCTCAGCGCCCAC +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSNSSFS*NWLSAH
Trigger: GTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTT...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTGCGGAATCGGGCCATaGCTTCCTTCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSCGIGP*LPSQAS
Trigger: AGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGGACAAGTAGTAATATaGCAGCTGCTTCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGGQVVI*QLLLLV
Trigger: AACAAGAAGAAGCAGCTGCCATATTACTACTTGTCC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAAGATCAAAGAATAAATaGAAAGGTACTGGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGRSKNK*KGTGLG
Trigger: TCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAATGCTGAGCTGGGTGTaGACAGGACGCTGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKMLSWV*TGRCAV
Trigger: GACTGCACAGCGTCCTGTCCACACCCAGCTCAGCAT...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTAGGTCTTCCTGCCAGTaGTTCATGACCCGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSRSSCQ*FMTRSE
Trigger: TTCTGAGCGGGTCATGAATCACTGGCAGGAAGACCT...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGCTCAAAGTCCACGATaGAAATGTTCCCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEAQSPR*KCSLAG
Trigger: TCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAATCTATGCAGTTCCCTaGAGATCAAAGAATAAATGG +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGIYAVP*RSKNKW
Trigger: CCATTTATTCTTTGATCTTCAGGGAACTGCATAGAT...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATCTATCAGTGGTCGTaGTTTGCTGTTGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEIYQWS*FAVAAW
Trigger: CCAAGCAGCAACAGCAAATCACGACCACTGATAGAT...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCATCTATCAGTGGTCGTaGTTTGCTGTTGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAIYQWS*FAVAAW
Trigger: CCAAGCAGCAACAGCAAATCACGACCACTGATAGAT...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGGAAGACTGGAACATGTaGATGAAGCGGTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWEDWNM*MKRLMN
Trigger: GTTCATCAACCGCTTCATGCACATGTTCCAGTCTTC...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGGTGAATCTCACGTGTaGCACCAGCAGCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEGESHV*HQQLEN
Trigger: ATTTTCAAGCTGCTGGTGGCACACGTGAGATTCACC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GTCTGTTTTGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGGCCTTGGTGTTGATTaGAATGGTGAATCTCACGTG +
Preference number: 4 (lower is better)
Translates to: VCFVGIDAIQQLKVHDENGLGVD*NGESHV
Trigger: CACGTGAGATTCACCATTGCAATCAACACCAAGGCC...ATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAAACAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR GCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGCACTCGCAGATGAGCTaGTCACGGGCCTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSHSQMS*SRALVL
Trigger: CAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTG...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGAGGGGATGTCTTCTTTaGTCTCCATGCCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSRGCLL*SPCPGP
Trigger: AGGCCCGGGGCATGGAGAGCAAAGAAGACATCCCCT...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGACTTGCGGCCCCGCATaGCGTACACGTAGACATCGT +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSTCGPA*RTRRHR
Trigger: ACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGT...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGTCGTGATTTGCTGTTaGTGCTTGGTGTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEVVICC*CLVWKC
Trigger: GCATTTCCACACCAAGCAGCAACAGCAAATCACGAC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGTCAGTGGTCGTGATTTaGTGTTGCTGCTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASESVVVI*CCCLVW
Trigger: CCACACCAAGCAGCAACAGCAAATCACGACCACTGA...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTCAGTGGTCGTGATTTaGTGTTGCTGCTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWSVVVI*CCCLVW
Trigger: CCACACCAAGCAGCAACAGCAAATCACGACCACTGA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATCGATTCTGACCAGCTaGATCTCGCCCAGTTCCTCG +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKSILTS*ISPSSS
Trigger: CGAGGAACTGGGCGAGATCCAGCTGGTCAGAATCGA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCAATCCTTGTGGCATTTaGCATCGATGCTCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTANPCGI*HRCSRG
Trigger: TCCCCTTGAGCATCGATGCCAAATGCCACAAGGATT...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGAATCCTTGTGGCATTTaGCATCGATGCTCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEENPCGI*HRCSRG
Trigger: TCCCCTTGAGCATCGATGCCAAATGCCACAAGGATT...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGCGGGGTAAATCCTTGTaGCATTTGGCATCGATGCTC +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASERGKSL*HLASML
Trigger: GAGCATCGATGCCAAATGCCACAAGGATTTACCCCG...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCCGGGGTAAATCCTTGTaGCATTTGGCATCGATGCTC +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCRGKSL*HLASML
Trigger: GAGCATCGATGCCAAATGCCACAAGGATTTACCCCG...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATTTTCACTATCAAACTaGATATCACGGGGTAAATCC +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGFSLSN*ISRGKS
Trigger: GGATTTACCCCGTGATATCCAGTTTGATAGTGAAAA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGAAAATGTTCCCTTGCTaGACCTCCTGCTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEKMFPC*TSCSKL
Trigger: CAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAAGGGGTCTGTTTTGTTaGCATCGATGCCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEERGLFC*HRCHPA
Trigger: TGCTGGATGGCATCGATGCCAACAAAACAGACCCCT...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGAGGGGTCTGTTTTGTTaGCATCGATGCCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASERGLFC*HRCHPA
Trigger: TGCTGGATGGCATCGATGCCAACAAAACAGACCCCT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTATACAGCAAGCAGATaGGAGCGGCCAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSYTASR*ERPGTG
Trigger: TCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTTGGGGACAATCTTGTTaGCCAGGTTCTTATACAGCA +
Preference number: 4 (lower is better)
Translates to: TVRNPVWGQVVIWQLLLLWGQSC*PGSYTA
Trigger: TGCTGTATAAGAACCTGGCCAACAAGATTGTCCCCA...AAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGGGATTTGGTTGAGCTaGATGGCAATGGGGACAATC +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCGIWLS*MAMGTI
Trigger: GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGGGATTTGGTTGAGCTaGATGGCAATGGGGACAATC +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEGIWLS*MAMGTI
Trigger: GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCC...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTCATCTCCCGGGATTTaGTTGAGCTGGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCSSPGI*LSWMAM
Trigger: CATTGCCATCCAGCTCAACCAAATCCCGGGAGATGA...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTGGACGTGGAAGTCACTaGAACGCACCCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSGRGSH*NAPRFW
Trigger: CCAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCC...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTGGGTGATGGTCTGGTaGACGTGGAAGTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSWVMVW*TWKSLE
Trigger: TTCCAGTGACTTCCACGTCCACCAGACCATCACCCA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GATCTTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTGGAAAGGTGGGTGATGGTCTaGTGGACGTGGAAGTCACTG +
Preference number: 4 (lower is better)
Translates to: DLDKDFLKVGEVIPRRLERWVMV*WTWKSL
Trigger: CAGTGACTTCCACGTCCACCAGACCATCACCCACCT...TTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATGTGTTCGCAGAAGGTaGGTGATGGTCTGGTGGACG +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKCVRRR*VMVWWT
Trigger: CGTCCACCAGACCATCACCCACCTTCTGCGAACACA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAAGGTCAGGTCCTTCATaGCCCTCTGCACCATCTGCA +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKRSGPS*PSAPSA
Trigger: TGCAGATGGTGCAGAGGGCCATGAAGGACCTGACCT...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GATCTTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTGGAAAGGTCAGGTCCTTCATaGCCCTCTGCACCATCTGCA +
Preference number: 4 (lower is better)
Translates to: DLDKDFLKVGEVIPRRLERSGPS*PSAPSA
Trigger: TGCAGATGGTGCAGAGGGCCATGAAGGACCTGACCT...TTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGTTCGGAATCCGGTCTaGGGACAAGTAGTAATATGG +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEVRNPV*GQVVIW
Trigger: CCATATTACTACTTGTCCCCAGACCGGATTCCGAAC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGTGGAAATGCTGAGCTaGGTGTGGACAGGACGCTGT +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKVEMLS*VWTGRC
Trigger: ACAGCGTCCTGTCCACACCCAGCTCAGCATTTCCAC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTGTTGCTTGAGAATGTaGATTTGGTCATCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWCCLRM*IWSSRA
Trigger: GGCCCGAGATGACCAAATTCACATTCTCAAGCAACA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAAGGTCTTCCTGCCAGTaGTTCATGACCCGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKRSSCQ*FMTRSE
Trigger: TTCTGAGCGGGTCATGAATCACTGGCAGGAAGACCT...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GATCTTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTGGAAAGGTCTTCCTGCCAGTaGTTCATGACCCGCTCAGAA +
Preference number: 4 (lower is better)
Translates to: DLDKDFLKVGEVIPRRLERSSCQ*FMTRSE
Trigger: TTCTGAGCGGGTCATGAATCACTGGCAGGAAGACCT...TTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR TCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGCTCAGCAATCACGCTaGCAATGGCCTCGAGGTTCT +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSAQQSR*QWPRGS
Trigger: AGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCATCTATCAGTGGTCGTaGTTTGCTGTTGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCIYQWS*FAVAAW
Trigger: CCAAGCAGCAACAGCAAATCACGACCACTGATAGAT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCGAAGACTGGAACATGTaGATGAAGCGGTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAEDWNM*MKRLMN
Trigger: GTTCATCAACCGCTTCATGCACATGTTCCAGTCTTC...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGTTTTGTTGGCATCGATaGCATCCAGCAGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEFCWHR*HPAAQS
Trigger: ACTTTGAGCTGCTGGATGGCATCGATGCCAACAAAA...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCCAGCTGGCGGTACATTaGAATGCCAAAAACCTCAGA +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCQLAVH*NAKNLR
Trigger: TCTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTG...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGCAGCTGGCGGTACATTaGAATGCCAAAAACCTCAGA +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWQLAVH*NAKNLR
Trigger: TCTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTG...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGGTGAATCTCACGTGTaGCACCAGCAGCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEGESHV*HQQLEN
Trigger: ATTTTCAAGCTGCTGGTGGCACACGTGAGATTCACC...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGGTGAATCTCACGTGTaGCACCAGCAGCTTGAAAAT +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCGESHV*HQQLEN
Trigger: ATTTTCAAGCTGCTGGTGGCACACGTGAGATTCACC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGGCCTTGGTGTTGATTaGAATGGTGAATCTCACGTG +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEGLGVD*NGESHV
Trigger: CACGTGAGATTCACCATTGCAATCAACACCAAGGCC...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGGCTTCTCGATAAAATaGTCTTCTGGGTACATGCCC +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEGFSIK*SSGYMP
Trigger: GGGCATGTACCCAGAAGAGCATTTTATCGAGAAGCC...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGGGCTTCTCGATAAAATaGTCTTCTGGGTACATGCCC +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWGFSIK*SSGYMP
Trigger: GGGCATGTACCCAGAAGAGCATTTTATCGAGAAGCC...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGGCTTCTCGATAAAATaGTCTTCTGGGTACATGCCC +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCGFSIK*SSGYMP
Trigger: GGGCATGTACCCAGAAGAGCATTTTATCGAGAAGCC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAACTTTGATCAATCTATaGAGTTCCCTGAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGTLINL*SSLKIK
Trigger: TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGT...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCAGTGGTCGTGATTTaGTGTTGCTGCTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSSVVVI*CCCLVW
Trigger: CCACACCAAGCAGCAACAGCAAATCACGACCACTGA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCAATCCTTGTGGCATTTaGCATCGATGCTCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCNPCGI*HRCSRG
Trigger: TCCCCTTGAGCATCGATGCCAAATGCCACAAGGATT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTAAAATGTTCCCTTGCTaGACCTCCTGCTCCAAGCTG +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSKMFPC*TSCSKL
Trigger: CAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTT...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCATCTCCCGGGATTTaGTTGAGCTGGATGGCAATG +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSSSPGI*LSWMAM
Trigger: CATTGCCATCCAGCTCAACCAAATCCCGGGAGATGA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGGACGTGGAAGTCACTaGAACGCACCCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKGRGSH*NAPRFW
Trigger: CCAAAATCTGGGTGCGTTCCAGTGACTTCCACGTCC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGATGGTCTGGTGGACGTaGAAGTCACTGGAACGCACC +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSMVWWT*KSLERT
Trigger: GGTGCGTTCCAGTGACTTCCACGTCCACCAGACCAT...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGATAAAATGCTCTTCTaGGTACATGCCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEDKMLF*VHAQEQ
Trigger: CTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGGTTCGGAATCCGGTCTaGGGACAAGTAGTAATATGG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWVRNPV*GQVVIW
Trigger: CCATATTACTACTTGTCCCCAGACCGGATTCCGAAC...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGGCAGTGTGCTCAGATaGCCACACTGTTCGGAATCC +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSGSVLR*PHCSES
Trigger: GGATTCCGAACAGTGTGGCCATCTGAGCACACTGCC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGCTGCTCTGTGTAGAATaGGTCCCTATGGTGTTTACA +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEELLCVE*VPMVFT
Trigger: TGTAAACACCATAGGGACCCATTCTACACAGAGCAG...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTGTTGCTTGAGAATGTaGATTTGGTCATCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSCCLRM*IWSSRA
Trigger: GGCCCGAGATGACCAAATTCACATTCTCAAGCAACA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTGCTCAAAGTCCACGATaGAAATGTTCCCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSAQSPR*KCSLAG
Trigger: TCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGC...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTTTTGTTGGCATCGATaGCATCCAGCAGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWFCWHR*HPAAQS
Trigger: ACTTTGAGCTGCTGGATGGCATCGATGCCAACAAAA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAATTTTGTTGGCATCGATaGCATCCAGCAGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEFCWHR*HPAAQS
Trigger: ACTTTGAGCTGCTGGATGGCATCGATGCCAACAAAA...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCAAGCCAGTCGTATTTTaGATCCGAAGGGAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAKPVVF*IRREEN
Trigger: ATTTTCCTCCCTTCGGATGCAAAATACGACTGGCTT...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATCAGTGGTCGTGATTTaGTGTTGCTGCTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKSVVVI*CCCLVW
Trigger: CCACACCAAGCAGCAACAGCAAATCACGACCACTGA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGTCATTCCAAGAAGACTaGAACATGTGCATGAAGCGG +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASESFQED*NMCMKR
Trigger: CCGCTTCATGCACATGTTCCAGTCTTCTTGGAATGA...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CTGCCAGTGATTCATGACCCGCTCAGAAATAGTGTTGCTGATCTTGACAAAGATTCATTCCAAGAAGACTaGAACATGTGCATGAAGCGG +
Preference number: 4 (lower is better)
Translates to: LPVIHDPLRNSVADLDKDSFQED*NMCMKR
Trigger: CCGCTTCATGCACATGTTCCAGTCTTCTTGGAATGA...ATCTTTGTCAAGATCAGCAACACTATTTCTGAGCGGGTCATGAATCACTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTCATTCCAAGAAGACTaGAACATGTGCATGAAGCGG +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWSFQED*NMCMKR
Trigger: CCGCTTCATGCACATGTTCCAGTCTTCTTGGAATGA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTGGGGACAATCTTGTTaGCCAGGTTCTTATACAGCA +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWWGQSC*PGSYTA
Trigger: TGCTGTATAAGAACCTGGCCAACAAGATTGTCCCCA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGGGATTTGGTTGAGCTaGATGGCAATGGGGACAATC +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKGIWLS*MAMGTI
Trigger: GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GATCTTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTGGAAGGGATTTGGTTGAGCTaGATGGCAATGGGGACAATC +
Preference number: 4 (lower is better)
Translates to: DLDKDFLKVGEVIPRRLEGIWLS*MAMGTI
Trigger: GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCC...TTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCAACGCACCCAGATTTTaGCCAAAAGCCAGTCGTATT +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCNAPRF*PKASRI
Trigger: AATACGACTGGCTTTTGGCCAAAATCTGGGTGCGTT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAAACGCACCCAGATTTTaGCCAAAAGCCAGTCGTATT +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEENAPRF*PKASRI
Trigger: AATACGACTGGCTTTTGGCCAAAATCTGGGTGCGTT...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CTGCCAGTGATTCATGACCCGCTCAGAAATAGTGTTGCTGATCTTGACAAAGATAACGCACCCAGATTTTaGCCAAAAGCCAGTCGTATT +
Preference number: 4 (lower is better)
Translates to: LPVIHDPLRNSVADLDKDNAPRF*PKASRI
Trigger: AATACGACTGGCTTTTGGCCAAAATCTGGGTGCGTT...ATCTTTGTCAAGATCAGCAACACTATTTCTGAGCGGGTCATGAATCACTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGAACGCACCCAGATTTTaGCCAAAAGCCAGTCGTATT +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASENAPRF*PKASRI
Trigger: AATACGACTGGCTTTTGGCCAAAATCTGGGTGCGTT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGATAAAATGCTCTTCTaGGTACATGCCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCDKMLF*VHAQEQ
Trigger: CTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ATTCATGACCCGCTCAGAAATAGTGTTGCTGATCTTGACAAAGATTTTCTCAAATGCGGAATCGGGCCATaGCTTCCTTCACAGGCTTCT +
Preference number: 4 (lower is better)
Translates to: IHDPLRNSVADLDKDFLKCGIGP*LPSQAS
Trigger: AGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCA...TTTGAGAAAATCTTTGTCAAGATCAGCAACACTATTTCTGAGCGGGTCATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTGTTCGGAATCCGGTCTaGGGACAAGTAGTAATATGG +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSVRNPV*GQVVIW
Trigger: CCATATTACTACTTGTCCCCAGACCGGATTCCGAAC...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATGTTGCTTGAGAATGTaGATTTGGTCATCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKCCLRM*IWSSRA
Trigger: GGCCCGAGATGACCAAATTCACATTCTCAAGCAACA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTACGTCGGTGTTGCTTaGGAATGTGAATTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWYVGVA*ECEFGH
Trigger: ATGACCAAATTCACATTCTCAAGCAACACCGACGTA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAATACGTCGGTGTTGCTTaGGAATGTGAATTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: MQFPEDQRINGKVLASEEYVGVA*ECEFGH
Trigger: ATGACCAAATTCACATTCTCAAGCAACACCGACGTA...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGCTCAAAGTCCACGATaGAAATGTTCCCTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKAQSPR*KCSLAG
Trigger: TCCAGCAAGGGAACATTTTCATCGTGGACTTTGAGC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCAAGCCAGTCGTATTTTaGATCCGAAGGGAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCKPVVF*IRREEN
Trigger: ATTTTCCTCCCTTCGGATGCAAAATACGACTGGCTT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGAAGCCAGTCGTATTTTaGATCCGAAGGGAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEKPVVF*IRREEN
Trigger: ATTTTCCTCCCTTCGGATGCAAAATACGACTGGCTT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGGCCTTGGTGTTGATTaGAATGGTGAATCTCACGTG +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKGLGVD*NGESHV
Trigger: CACGTGAGATTCACCATTGCAATCAACACCAAGGCC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGCGGGGTAAATCCTTGTaGCATTTGGCATCGATGCTC +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSRGKSL*HLASML
Trigger: GAGCATCGATGCCAAATGCCACAAGGATTTACCCCG...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTGGGGACAATCTTGTTaGCCAGGTTCTTATACAGCA +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSWGQSC*PGSYTA
Trigger: TGCTGTATAAGAACCTGGCCAACAAGATTGTCCCCA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGGGATTTGGTTGAGCTaGATGGCAATGGGGACAATC +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSGIWLS*MAMGTI
Trigger: GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTAACGCACCCAGATTTTaGCCAAAAGCCAGTCGTATT +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSNAPRF*PKASRI
Trigger: AATACGACTGGCTTTTGGCCAAAATCTGGGTGCGTT...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCGGACAAGTAGTAATATaGCAGCTGCTTCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAGQVVI*QLLLLV
Trigger: AACAAGAAGAAGCAGCTGCCATATTACTACTTGTCC...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GTGCATGAAGCGGTTGATGAACAGGTTCTCCATCGCTTTGGAGTAATTCAGAACGGACAAGTAGTAATATaGCAGCTGCTTCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: VHEAVDEQVLHRFGVIQNGQVVI*QLLLLV
Trigger: AACAAGAAGAAGCAGCTGCCATATTACTACTTGTCC...GTTCTGAATTACTCCAAAGCGATGGAGAACCTGTTCATCAACCGCTTCATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGTTCGGAATCCGGTCTaGGGACAAGTAGTAATATGG +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKVRNPV*GQVVIW
Trigger: CCATATTACTACTTGTCCCCAGACCGGATTCCGAAC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGTTGCTTGAGAATGTaGATTTGGTCATCTCGGGCC +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSCCLRM*IWSSRA
Trigger: GGCCCGAGATGACCAAATTCACATTCTCAAGCAACA...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATCTATGCAGTTCCCTaGAGATCAAAGAATAAATGG +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEIYAVP*RSKNKW
Trigger: CCATTTATTCTTTGATCTTCAGGGAACTGCATAGAT...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGATGGTGTTTACACTTTaGTCAATCTATGCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASEMVFTL*SIYAVP
Trigger: GGGAACTGCATAGATTGATCAAAGTGTAAACACCAT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATTTTGTTGGCATCGATaGCATCCAGCAGCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKFCWHR*HPAAQS
Trigger: ACTTTGAGCTGCTGGATGGCATCGATGCCAACAAAA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGCAGCTGGCGGTACATTaGAATGCCAAAAACCTCAGA +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSQLAVH*NAKNLR
Trigger: TCTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTG...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGTCGTGATTTGCTGTTaGTGCTTGGTGTGGAAATGC +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSVVICC*CLVWKC
Trigger: GCATTTCCACACCAAGCAGCAACAGCAAATCACGAC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGTTTTCACTATCAAACTaGATATCACGGGGTAAATCC +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEFSLSN*ISRGKS
Trigger: GGATTTACCCCGTGATATCCAGTTTGATAGTGAAAA...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGGTTCTCCATCGCTTTaGAGTAATTCAGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCGSPSL*SNSEQS
Trigger: ACTTTGTTCTGAATTACTCCAAAGCGATGGAGAACC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATCATTCCAAGAAGACTaGAACATGTGCATGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKSFQED*NMCMKR
Trigger: CCGCTTCATGCACATGTTCCAGTCTTCTTGGAATGA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGATAAAATGCTCTTCTaGGTACATGCCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKDKMLF*VHAQEQ
Trigger: CTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp TTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTGGAACATGGATAAAATGCTCTTCTaGGTACATGCCCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: LTKIFSKSAKSFQEDWNMDKMLF*VHAQEQ
Trigger: CTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATC...CATGTTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGGACAAGTAGTAATATaGCAGCTGCTTCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCGQVVI*QLLLLV
Trigger: AACAAGAAGAAGCAGCTGCCATATTACTACTTGTCC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAACTGCTCTGTGTAGAATaGGTCCCTATGGTGTTTACA +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKLLCVE*VPMVFT
Trigger: TGTAAACACCATAGGGACCCATTCTACACAGAGCAG...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
3UTR CAA 72 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTaGATCAATCTATGCAGTTCCCTGAAGATCAAAGAA +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYT*INLCSSLKIKE
Trigger: TTCTTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTATGGTGTTTACACTTTaGTCAATCTATGCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSMVFTL*SIYAVP
Trigger: GGGAACTGCATAGATTGATCAAAGTGTAAACACCAT...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGCATCGATATTGTTTTTaGCGTGTTTCCAGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: QFPEDQRINGKVLASEEEHRYCF*RVSSSL
Trigger: TAAAGAACTGGAAACACGGCAAAAACAATATCGATG...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGAAGACTGGAACATGTaGATGAAGCGGTTGATGAAC +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSEDWNM*MKRLMN
Trigger: GTTCATCAACCGCTTCATGCACATGTTCCAGTCTTC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GATCTTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTGGAAAAGCCAGTCGTATTTTaGATCCGAAGGGAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: DLDKDFLKVGEVIPRRLEKPVVF*IRREEN
Trigger: ATTTTCCTCCCTTCGGATGCAAAATACGACTGGCTT...TTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTTTTCACTATCAAACTaGATATCACGGGGTAAATCC +
Preference number: 4 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWFSLSN*ISRGKS
Trigger: GGATTTACCCCGTGATATCCAGTTTGATAGTGAAAA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTCATTCCAAGAAGACTaGAACATGTGCATGAAGCGG +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSSFQED*NMCMKR
Trigger: CCGCTTCATGCACATGTTCCAGTCTTCTTGGAATGA...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGCTGCTCTGTGTAGAATaGGTCCCTATGGTGTTTACA +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSLLCVE*VPMVFT
Trigger: TGTAAACACCATAGGGACCCATTCTACACAGAGCAG...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTACGTCGGTGTTGCTTaGGAATGTGAATTTGGTCAT +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSYVGVA*ECEFGH
Trigger: ATGACCAAATTCACATTCTCAAGCAACACCGACGTA...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCCATCGATATTGTTTTTaGCGTGTTTCCAGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCHRYCF*RVSSSL
Trigger: TAAAGAACTGGAAACACGGCAAAAACAATATCGATG...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGACTTTGATCAATCTATaGAGTTCCCTGAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: SMQFPEDQRINGKVLASETLINL*SSLKIK
Trigger: TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGGACAAGTAGTAATATaGCAGCTGCTTCTTCTTGTT +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKGQVVI*QLLLLV
Trigger: AACAAGAAGAAGCAGCTGCCATATTACTACTTGTCC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR TCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAATCTATGCAGTTCCCTaGAGATCAAAGAATAAATGG +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKIYAVP*RSKNKW
Trigger: CCATTTATTCTTTGATCTTCAGGGAACTGCATAGAT...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ATTCATGACCCGCTCAGAAATAGTGTTGCTGATCTTGACAAAGATTTTCTCAAAAAGCCAGTCGTATTTTaGATCCGAAGGGAGGAAAAT +
Preference number: 4 (lower is better)
Translates to: IHDPLRNSVADLDKDFLKKPVVF*IRREEN
Trigger: ATTTTCCTCCCTTCGGATGCAAAATACGACTGGCTT...TTTGAGAAAATCTTTGTCAAGATCAGCAACACTATTTCTGAGCGGGTCATGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGGTTCTCCATCGCTTTaGAGTAATTCAGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSGSPSL*SNSEQS
Trigger: ACTTTGTTCTGAATTACTCCAAAGCGATGGAGAACC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGAGATCAAAGAATAAATaGAAAGGTACTGGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSRSKNK*KGTGLG
Trigger: TCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAACATCGATATTGTTTTTaGCGTGTTTCCAGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKHRYCF*RVSSSL
Trigger: TAAAGAACTGGAAACACGGCAAAAACAATATCGATG...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR GCA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGCATCGATATTGTTTTTaGCGTGTTTCCAGTTCTTTA +
Preference number: 4 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSHRYCF*RVSSSL
Trigger: TAAAGAACTGGAAACACGGCAAAAACAATATCGATG...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS CCA 90 bp TCTACCACCTCGGCCGTGAACCTGGCTCAGGGGGCGCAGCCGGGGTaGGCGACCCAGCCAGGTCTGCGGAGCGGTGCCCGGCGGCAACCC +
Preference number: 5 (lower is better)
Translates to: STTSAVNLAQGAQPG*ATQPGLRSGARRQP
Trigger: GGGTTGCCGCCGGGCACCGCTCCGCAGACCTGGCTGGGTCGCCCACCCCGGCTGCGCCCCCTGAGCCAGGTTCACGGCCGAGGTGGTAGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481117.1
ENST00000617751.4
CDS TCA 90 bp TGTAGTCGTCAGTGCCGGCGAACCACTGGCTGCCAGTGGCCACGGTaGCCGTGTAGGAGGGCATGGCGCGGGCCGCGGGAGCAGCGAGCG +
Preference number: 5 (lower is better)
Translates to: CSRQCRRTTGCQWPR*PCRRAWRGPREQRA
Trigger: CGCTCGCTGCTCCCGCGGCCCGCGCCATGCCCTCCTACACGGTCACCGTGGCCACTGGCAGCCAGTGGTTCGCCGGCACTGACGACTACA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS GCA 90 bp CCAGCGGGCCCGGCCCTGCCTACCTGGCCGAAGTTGACCGCGGCGTaGTGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGAC +
Preference number: 5 (lower is better)
Translates to: PAGPALPTWPKLTAA*WAEAVKITTVRYSD
Trigger: GTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGCGGTCAACTTCGGCCAGGTAGGCAGGGCCGGGCCCGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498461.1
ENST00000622032.1
CDS CCA 90 bp GGTGCGCTCCCAGCCACAGGAGGGCAGCAGGCGTGGGCAGGTGTGTaGGGGACCCCAGCACCAGCGGGCCTGGGCTGTGAAGTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: GALPATGGQQAWAGV*GTPAPAGLGCEVCS
Trigger: AGAGCAGACTTCACAGCCCAGGCCCGCTGGTGCTGGGGTCCCCCACACACCTGCCCACGCCTGCTGCCCTCCTGTGGCTGGGAGCGCACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000493336.1
ENST00000612275.1
CDS CCA 90 bp GCGGGCCCGGCCCTGCCTACCTGGCCGAAGTTGACCGCGGCGTGCTaGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGC +
Preference number: 5 (lower is better)
Translates to: AGPALPTWPKLTAAC*AEAVKITTVRYSDS
Trigger: GCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGCGGTCAACTTCGGCCAGGTAGGCAGGGCCGGGCCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498461.1
ENST00000622032.1
CDS TCA 90 bp CCACCACCTGGTCGCCCTCGTAGTAGATGTCTACCACCTCGGCCGTaGACCTGGCTCAGGGGGCGCAGCCGGGGTGGGCGACCCAGCCAG +
Preference number: 5 (lower is better)
Translates to: PPPGRPRSRCLPPRP*TWLRGRSRGGRPSQ
Trigger: CTGGCTGGGTCGCCCACCCCGGCTGCGCCCCCTGAGCCAGGTTCACGGCCGAGGTGGTAGACATCTACTACGAGGGCGACCAGGTGGTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481117.1
ENST00000617751.4
CDS CCA 90 bp GGGCCCTGCAGTCCGTCCATCCTCTTTCCCCGCGGCCAGCGCCCTTaGCTGAGCGGGCAGAATCCATCCTGCAAGTCCCGTGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: GPCSPSILFPRGQRP*LSGQNPSCKSRARP
Trigger: GGGCCTGGCACGGGACTTGCAGGATGGATTCTGCCCGCTCAGCCAAGGGCGCTGGCCGCGGGGAAAGAGGATGGACGGACTGCAGGGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498461.1
ENST00000622032.1
CDS TCA 90 bp CCTGCAGTCCGTCCATCCTCTTTCCCCGCGGCCAGCGCCCTTGGCTaGGCGGGCAGAATCCATCCTGCAAGTCCCGTGCCAGGCCCCGAG +
Preference number: 5 (lower is better)
Translates to: PAVRPSSFPAASALG*AGRIHPASPVPGPE
Trigger: CTCGGGGCCTGGCACGGGACTTGCAGGATGGATTCTGCCCGCTCAGCCAAGGGCGCTGGCCGCGGGGAAAGAGGATGGACGGACTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000498461.1
ENST00000622032.1
CDS CCA 90 bp CACCATCTGCACGTGCCCACCGCCCCCTGTGGCGTTGGCCTGGAGTaGGAGGTAGAGTGCCCTGAGCGGGTGGCTCCTCCCACAGCTGTC +
Preference number: 5 (lower is better)
Translates to: HHLHVPTAPCGVGLE*EVECPERVAPPTAV
Trigger: GACAGCTGTGGGAGGAGCCACCCGCTCAGGGCACTCTACCTCCCACTCCAGGCCAACGCCACAGGGGGCGGTGGGCACGTGCAGATGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493336.1
ENST00000612275.1
CDS-3UTR CAA 90 bp GCGGCGTGCTGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCGGGAAGCCTGAGGACTaGCGGCCCCGCATGCCGTAC +
Preference number: 5 (lower is better)
Translates to: AACWAEAVKITTVRYSDSGKPED*RPRMPY
Trigger: GTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCCC...GCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS GCA 90 bp CCAGCGCCCTTGGCTGAGCGGGCAGAATCCATCCTGCAAGTCCCGTaGCAGGCCCCGAGGCTGTCCGAGGGTGCAGTACGCGTGCAGAAC +
Preference number: 5 (lower is better)
Translates to: PAPLAERAESILQVP*QAPRLSEGAVRVQN
Trigger: GTTCTGCACGCGTACTGCACCCTCGGACAGCCTCGGGGCCTGGCACGGGACTTGCAGGATGGATTCTGCCCGCTCAGCCAAGGGCGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498461.1
ENST00000622032.1
CDS-3UTR CAA 90 bp AGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTCCGCCCCCTGTGGCGTaGGCCTTGTCAAAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: SGRGRAACPRSAQWSPRPPPPVA*ALSKRP
Trigger: TGGCCTCTTTGACAAGGCCAACGCCACAGGGGGCGG...AGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp GCACTCTACCATCTCCGTGGTCACCGGGAGCTTCTCGGGCAGCTCTGTGCAGCGATGGTCACCACGCCCTaGGCAGTCGGTGGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: ALYHLRGHRELLGQLCAAMVTTP*AVGGGA
Trigger: AGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCAT...CGCTGCACAGAGCTGCCCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS TCA 90 bp TGTCCAGCAGGTGCTTCTCGCTGCAGCCCGCCGAGCCCACGAGGCTaGGGTAGATGTAGTCGTCAGTGCCGGCGAACCACTGGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: CPAGASRCSPPSPRG*GRCSRQCRRTTGCQ
Trigger: CTGGCAGCCAGTGGTTCGCCGGCACTGACGACTACATCTACCTCAGCCTCGTGGGCTCGGCGGGCTGCAGCGAGAAGCACCTGCTGGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS CCA 90 bp GGGTACATGCCCAGGAACAGCTGGCCGAAGTTGACCGCGGCGTGCTaGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGC +
Preference number: 5 (lower is better)
Translates to: GYMPRNSWPKLTAAC*AEAVKITTVRYSDS
Trigger: GCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGCGGTCAACTTCGGCCAGCTGTTCCTGGGCATGTACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542434.5
ENST00000622021.4
CDS-3UTR CAA 90 bp ACCTCCTGCTCCAAGCTGAGCTGCCGCTCCAGGCTGCACTCTACCATCTCCGTGATGGTCACCACGCCCTaGGCAGTCGGTGGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: TSCSKLSCRSRLHSTISVMVTTP*AVGGGA
Trigger: AGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCAT...CACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS GCA 90 bp AGGAGCCTCCCGCCCAATCCAATGCAAGGGACTGAACCGTGGGGCTaGAGAGTACAAGAGGGAAGGGTGCGCTCCCAGCCACAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: RSLPPNPMQGTEPWG*RVQEGRVRSQPQEG
Trigger: GCCCTCCTGTGGCTGGGAGCGCACCCTTCCCTCTTGTACTCTGCAGCCCCACGGTTCAGTCCCTTGCATTGGATTGGGCGGGAGGCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493336.1
ENST00000612275.1
CDS-3UTR CAA 90 bp CGCTCCAGGCTGCACTCTACCATCTCCGTGGTCACCGGGAGCTTCTCGGGCAGCCGGCTCTTGACCGACTaGGGGAAGCCTGAGGACTTG +
Preference number: 5 (lower is better)
Translates to: RSRLHSTISVVTGSFSGSRLLTD*GKPEDL
Trigger: CAAGTCCTCAGGCTTCCCCAAGTCGGTCAAGAGCCG...GCTGCCCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGTGCAGCCTGGAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS CCA 90 bp CTAGGGAGGAGCCTCCCGCCCAATCCAATGCAAGGGACTGAACCGTaGGGCTGCAGAGTACAAGAGGGAAGGGTGCGCTCCCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: LGRSLPPNPMQGTEP*GCRVQEGRVRSQPQ
Trigger: CTGTGGCTGGGAGCGCACCCTTCCCTCTTGTACTCTGCAGCCCCACGGTTCAGTCCCTTGCATTGGATTGGGCGGGAGGCTCCTCCCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493336.1
ENST00000612275.1
CDS TCA 90 bp AGAGGTGCTAGGGAGGAGCCTCCCGCCCAATCCAATGCAAGGGACTaGACCGTGGGGCTGCAGAGTACAAGAGGGAAGGGTGCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: RGAREEPPAQSNARD*TVGLQSTRGKGALP
Trigger: TGGGAGCGCACCCTTCCCTCTTGTACTCTGCAGCCCCACGGTTCAGTCCCTTGCATTGGATTGGGCGGGAGGCTCCTCCCTAGCACCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493336.1
ENST00000612275.1
CDS-3UTR CAA 90 bp TGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCTGCTCCCGGCAGGGGTCTGTTTTGTaGGCATCGATGCCATCCAGC +
Preference number: 5 (lower is better)
Translates to: WAEAVKITTVRYSDSCSRQGSVL*ASMPSS
Trigger: GCTGGATGGCATCGATGCCAACAAAACAGACCCCTG...CCGGGAGCAGCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp AGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTGCAGCTGGCGGTACATaGCAATGCCAAAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: SGRGRAACPRSAQWSPRPAAGGT*QCQKPQ
Trigger: CTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTGC...AGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CGCTCCAGGCTGCACTCTACCATCTCCGTGGTCACCGGGAGCTTCTCGGGCAGCAGCTGCTCACGGGCCTaGGTGTTGATTGCAATGGTG +
Preference number: 5 (lower is better)
Translates to: RSRLHSTISVVTGSFSGSSCSRA*VLIAMV
Trigger: CACCATTGCAATCAACACCAAGGCCCGTGAGCAGCT...GCTGCCCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGTGCAGCCTGGAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCACGGCTCTTGACCGACTaGGGGAAGCCTGAGGACTTG +
Preference number: 5 (lower is better)
Translates to: LGGRDVTAKRPGQTACQARLLTD*GKPEDL
Trigger: CAAGTCCTCAGGCTTCCCCAAGTCGGTCAAGAGCCG...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AGCGGCCGCGGTCGGGCAGCGTGTCCACGATCTGCTCAATGGTCACCACGCCCTTCACGGGGTAAATCCTaGTGGCATTTGGCATCGATG +
Preference number: 5 (lower is better)
Translates to: SGRGRAACPRSAQWSPRPSRGKS*WHLASM
Trigger: CATCGATGCCAAATGCCACAAGGATTTACCCCGTGA...AGGGCGTGGTGACCATTGAGCAGATCGTGGACACGCTGCCCGACCGCGGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCATCTCCCGGGATTTGGTaGAGCTGGATGGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: LGGRDVTAKRPGQTACQASPGIW*SWMAMG
Trigger: CCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGA...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ACCTCCTGCTCCAAGCTGAGCTGCCGCTCCAGGCTGCACTCTACCATCTCCGTGTCTCCCGGGATTTGGTaGAGCTGGATGGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: TSCSKLSCRSRLHSTISVSPGIW*SWMAMG
Trigger: CCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGA...CACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp TACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCAGGGGTCTGTTTTGTCCATGCCCCGGGCCTaGATGGCCTCGGGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: YSKQMGAARNWSVQGSVLSMPRA*MASGKH
Trigger: GTGCTTTCCCGAGGCCATCAAGGCCCGGGGCATGGA...CAAAACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS GCA 90 bp CATCTGGCTGGGGCAGCTGGCCTTCCCACAGTGAGACTGGCAGTGTaGTCAGATGGCCACACTGTTCGGAATCCGGTCTGGGGACAAGTA +
Preference number: 5 (lower is better)
Translates to: HLAGAAGLPTVRLAV*SDGHTVRNPVWGQV
Trigger: TACTTGTCCCCAGACCGGATTCCGAACAGTGTGGCCATCTGAGCACACTGCCAGTCTCACTGTGGGAAGGCCAGCTGCCCCAGCCAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TGGGCGGAGGCGGTGAAGATCACCACGGTCAGGTACTCCGACAGCTGCTCCCGGAAATCCTTGTGGCATTaGGCATCGATGCTCAAGGGG +
Preference number: 5 (lower is better)
Translates to: WAEAVKITTVRYSDSCSRKSLWH*ASMLKG
Trigger: CCCCTTGAGCATCGATGCCAAATGCCACAAGGATTT...CCGGGAGCAGCTGTCGGAGTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp GAAAATGTTCCCTTGCTGGACCTCCTGCTCCAAGCTGAGCTGCCGCTCCAGGCTCCTGTGGCGTTGGCCTaGTCAAAGAGGCCACACTCG +
Preference number: 5 (lower is better)
Translates to: ENVPLLDLLLQAELPLQAPVALA*SKRPHS
Trigger: CGAGTGTGGCCTCTTTGACAAGGCCAACGCCACAGG...AGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATCGTACTGGCCGAAGTaGACCGCGGCGTGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGSYWPK*TAACWA
Trigger: CGCCCAGCACGCCGCGGTCAACTTCGGCCAGTACGA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CAA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAATGGTCACCACGCCCTaGGCAGTCGGTGGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGMVTTP*AVGGGA
Trigger: AGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCAT...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS TCA 90 bp GACCAGCTGGATCTCGCCCAGTTCCTCGTCCACAGTCACGTCGTATaGATCCACCGCGCCACGCTCGAAGTCGTTGTAGAAGGGCTTGTC +
Preference number: 5 (lower is better)
Translates to: DQLDLAQFLVHSHVV*IHRATLEVVVEGLV
Trigger: GACAAGCCCTTCTACAACGACTTCGAGCGTGGCGCGGTGGATTCATACGACGTGACTGTGGACGAGGAACTGGGCGAGATCCAGCTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS-3UTR CAA 90 bp GCACTCTACCATCTCCGTGGTCACCGGGAGCTTCTCGGGCAGCTCTGTGCAGCGAAATCCTTGTGGCATTaGGCATCGATGCTCAAGGGG +
Preference number: 5 (lower is better)
Translates to: ALYHLRGHRELLGQLCAAKSLWH*ASMLKG
Trigger: CCCCTTGAGCATCGATGCCAAATGCCACAAGGATTT...CGCTGCACAGAGCTGCCCGAGAAGCTCCCGGTGACCACGGAGATGGTAGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp GGAAGCCTGAGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGAGTGCAGGGGTCTGTTTaGTTGGCATCGATGCCATCC +
Preference number: 5 (lower is better)
Translates to: GSLRTCGPACRTRRHRSRVQGSV*LASMPS
Trigger: GGATGGCATCGATGCCAACAAAACAGACCCCTGCAC...TCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCACTCATCTCCCGGGATTaGGTTGAGCTGGATGGCAAT +
Preference number: 5 (lower is better)
Translates to: LGGRDVTAKRPGQTACQALISRD*VELDGN
Trigger: ATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAG...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GTTCTTGCGGAATCGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAATGCTCGGGAAGCCTGAGGACTaGCGGCCCCGCATGCCGTAC +
Preference number: 5 (lower is better)
Translates to: VLAESGHGFLHRLLDKMLGKPED*RPRMPY
Trigger: GTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCCC...GAGCATTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCAAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp GAGGAAAATAGGGTTCTCATCTCCCGGGATTTGGTTGAGCTGGATGGCAATGGGTCGTACTGGCCGAAGTaGACCGCGGCGTGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: EENRVLISRDLVELDGNGSYWPK*TAACWA
Trigger: CGCCCAGCACGCCGCGGTCAACTTCGGCCAGTACGA...CCCATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAGAACCCTATTTTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAAGCTGCTTCTTCTTGTaGCGCTCAGCAATCACGCTG +
Preference number: 5 (lower is better)
Translates to: LGGRDVTAKRPGQTACQASCFFL*RSAITL
Trigger: CAGCGTGATTGCTGAGCGCAACAAGAAGAAGCAGCT...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ACCTCCTGCTCCAAGCTGAGCTGCCGCTCCAGGCTGCACTCTACCATCTCCGTGTCATTCAGCCAGTACTaGCGCTTCTCGATTCTGACC +
Preference number: 5 (lower is better)
Translates to: TSCSKLSCRSRLHSTISVSFSQY*RFSILT
Trigger: GGTCAGAATCGAGAAGCGCAAGTACTGGCTGAATGA...CACGGAGATGGTAGAGTGCAGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCATCACGGGGTAAATCCTaGTGGCATTTGGCATCGATG +
Preference number: 5 (lower is better)
Translates to: LGGRDVTAKRPGQTACQASRGKS*WHLASM
Trigger: CATCGATGCCAAATGCCACAAGGATTTACCCCGTGA...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CTCGGGAAAGCACAGGGAGGCATAGGTCAGGTCCTTCATGGCCCTCTGCACCATGTGCAGGGGTCTGTTTaGTTGGCATCGATGCCATCC +
Preference number: 5 (lower is better)
Translates to: LGKAQGGIGQVLHGPLHHVQGSV*LASMPS
Trigger: GGATGGCATCGATGCCAACAAAACAGACCCCTGCAC...ATGGTGCAGAGGGCCATGAAGGACCTGACCTATGCCTCCCTGTGCTTTCCCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCATCACGGGCCTTGGTGTaGATTGCAATGGTGAATCTC +
Preference number: 5 (lower is better)
Translates to: LGGRDVTAKRPGQTACQASRALV*IAMVNL
Trigger: GAGATTCACCATTGCAATCAACACCAAGGCCCGTGA...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GAACAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGGCAGCTGCTTCTTCTaGTTGCGCTCAGCAATCACG +
Preference number: 5 (lower is better)
Translates to: EQLVFLELAQRPHCTQMPGSCFF*LRSAIT
Trigger: CGTGATTGCTGAGCGCAACAAGAAGAAGCAGCTGCC...TGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS CCA 90 bp TGGGGCAGCTGGCCTTCCCACAGTGAGACTGGCAGTGTGCTCAGATaGCCACACTGTTCGGAATCCGGTCTGGGGACAAGTAGTAATATG +
Preference number: 5 (lower is better)
Translates to: WGSWPSHSETGSVLR*PHCSESGLGTSSNM
Trigger: CATATTACTACTTGTCCCCAGACCGGATTCCGAACAGTGTGGCCATCTGAGCACACTGCCAGTCTCACTGTGGGAAGGCCAGCTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAATGTGCATGAAGCGGTaGATGAACAGGTTCTCCATC +
Preference number: 5 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAMCMKR*MNRFSI
Trigger: GATGGAGAACCTGTTCATCAACCGCTTCATGCACAT...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCAGGGGTCTGTTTTGCAGGGGTCTGTTTTGTaGGCATCGATGCCATCCAGC +
Preference number: 5 (lower is better)
Translates to: YSKQMGAARNWSVQGSVLQGSVL*ASMPSS
Trigger: GCTGGATGGCATCGATGCCAACAAAACAGACCCCTG...CAAAACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCAGCAATGGGGACAATCTaGTTGGCCAGGTTCTTATAC +
Preference number: 5 (lower is better)
Translates to: LGGRDVTAKRPGQTACQAAMGTI*LARFLY
Trigger: GTATAAGAACCTGGCCAACAAGATTGTCCCCATTGC...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GAACAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCACTCATCTCCCGGGATTaGGTTGAGCTGGATGGCAAT +
Preference number: 5 (lower is better)
Translates to: EQLVFLELAQRPHCTQMPLISRD*VELDGN
Trigger: ATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAG...TGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCCTTCACCTCATCTCCCGGGATTaGGTTGAGCTGGATGGCAAT +
Preference number: 5 (lower is better)
Translates to: HADNGLEVLAESGHGFLHLISRD*VELDGN
Trigger: ATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAG...GTGAAGGAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CACTCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCCGGCTCTTGACCGACTaGGGGAAGCCTGAGGACTTG +
Preference number: 5 (lower is better)
Translates to: HSQMSCSRALVLIAMVNLRLLTD*GKPEDL
Trigger: CAAGTCCTCAGGCTTCCCCAAGTCGGTCAAGAGCCG...GAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp ATAGGGTTCTCATCTCCCGGGATTTGGTTGAGCTGGATGGCAATGGGGACAATCAGCTGCTCCCGGCTCTaGACCGACTTGGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: IGFSSPGIWLSWMAMGTISCSRL*TDLGKP
Trigger: AGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGCT...GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAGAACCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CACTCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCATGGCCTCGAGGTTCTaGCGGAATCGGGCCATGGCT +
Preference number: 5 (lower is better)
Translates to: HSQMSCSRALVLIAMVNLMASRF*RNRAMA
Trigger: AGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCAT...GAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp TCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCACGATGGCCTCGAGGTTCTaGCGGAATCGGGCCATGGCT +
Preference number: 5 (lower is better)
Translates to: SQMSCSRALVLIAMVNLTMASRF*RNRAMA
Trigger: AGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCAT...CGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS TCA 90 bp TCAGGTACCAGTCGTCATTCAGCCAGTACTTGCGCTTCTCGATTCTaGCCAGCTGGATCTCGCCCAGTTCCTCGTCCACAGTCACGTCGT +
Preference number: 5 (lower is better)
Translates to: SGTSRHSASTCASRF*PAGSRPVPRPQSRR
Trigger: ACGACGTGACTGTGGACGAGGAACTGGGCGAGATCCAGCTGGTCAGAATCGAGAAGCGCAAGTACTGGCTGAATGACGACTGGTACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS GCA 90 bp AGGAGGGCACCCACCTTGTCAAAGAGGCCACACTCGCAGATGAGCTaGTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCACGTGT +
Preference number: 5 (lower is better)
Translates to: RRAPTLSKRPHSQMS*SRALVLIAMVNLTC
Trigger: ACACGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGGCCTCTTTGACAAGGTGGGTGCCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475300.1
ENST00000616521.4
CDS-3UTR CAA 90 bp AGGACTTGCGGCCCCGCATGCCGTACACGTAGACATCGTTCACGAAGTCCTGCATCATTCAGCCAGTACTaGCGCTTCTCGATTCTGACC +
Preference number: 5 (lower is better)
Translates to: RTCGPACRTRRHRSRSPASFSQY*RFSILT
Trigger: GGTCAGAATCGAGAAGCGCAAGTACTGGCTGAATGA...TGCAGGACTTCGTGAACGATGTCTACGTGTACGGCATGCGGGGCCGCAAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCACTTGAGAATGTGAATTaGGTCATCTCGGGCCAACTT +
Preference number: 5 (lower is better)
Translates to: LGGRDVTAKRPGQTACQALENVN*VISGQL
Trigger: AAGTTGGCCCGAGATGACCAAATTCACATTCTCAAG...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CTCGGAGGAAGAGATGTGACTGCCAAGAGGCCTGGCCAGACAGCCTGCCAGGCACTCCATCCATCGATATaGTTTTTGCCGTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: LGGRDVTAKRPGQTACQALHPSI*FLPCFQ
Trigger: CTGGAAACACGGCAAAAACAATATCGATGGATGGAG...TGCCTGGCAGGCTGTCTGGCCAGGCCTCTTGGCAGTCACATCTCTTCCTCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CAGCTCGTTTTCCTGGAACTGGCTCAGCGCCCACACTGCACCCAGATGCCAGCAGCAATGGGGACAATCTaGTTGGCCAGGTTCTTATAC +
Preference number: 5 (lower is better)
Translates to: QLVFLELAQRPHCTQMPAAMGTI*LARFLY
Trigger: GTATAAGAACCTGGCCAACAAGATTGTCCCCATTGC...TGCTGGCATCTGGGTGCAGTGTGGGCGCTGAGCCAGTTCCAGGAAAACGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATCTCCCGGGATTTGGTaGAGCTGGATGGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGSPGIW*SWMAMG
Trigger: CCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCACGTCTCCCGGGATTTGGTaGAGCTGGATGGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: SQMSCSRALVLIAMVNLTSPGIW*SWMAMG
Trigger: CCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGA...CGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp TGGCCAGGTTCTTATACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCGCAGCTGGCGGTACATaGCAATGCCAAAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: WPGSYTASRWERPGTGVCAAGGT*QCQKPQ
Trigger: CTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTGC...GCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTATAAGAACCTGGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp GAAAATGTTCCCTTGCTGGACCTCCTGCTCCAAGCTGAGCTGCCGCTCCAGGCTTCACGGGCCTTGGTGTaGATTGCAATGGTGAATCTC +
Preference number: 5 (lower is better)
Translates to: ENVPLLDLLLQAELPLQASRALV*IAMVNL
Trigger: GAGATTCACCATTGCAATCAACACCAAGGCCCGTGA...AGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp ATAGGGTTCTCATCTCCCGGGATTTGGTTGAGCTGGATGGCAATGGGGACAATCCCTGTGGCGTTGGCCTaGTCAAAGAGGCCACACTCG +
Preference number: 5 (lower is better)
Translates to: IGFSSPGIWLSWMAMGTIPVALA*SKRPHS
Trigger: CGAGTGTGGCCTCTTTGACAAGGCCAACGCCACAGG...GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAGAACCCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp TTTGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATGTTCCCCCGCCCCCTGTGGCGTaGGCCTTGTCAAAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: FVGIDAIQQLKVHDENVPPPPVA*ALSKRP
Trigger: TGGCCTCTTTGACAAGGCCAACGCCACAGGGGGCGG...GGGAACATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGTCCATGCCCCGGGCCTaGATGGCCTCGGGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWSMPRA*MASGKH
Trigger: GTGCTTTCCCGAGGCCATCAAGGCCCGGGGCATGGA...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCGGGAAGCCTGAGGACTaGCGGCCCCGCATGCCGTAC +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAGKPED*RPRMPY
Trigger: GTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCCC...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS GCA 90 bp TTGCGGAATCGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAATaGTCTTCTGGGTACATGCCCAGGAACAGCTGGCCGAAGTTGACC +
Preference number: 5 (lower is better)
Translates to: LRNRAMASFTGFSIK*SSGYMPRNSWPKLT
Trigger: GGTCAACTTCGGCCAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542434.5
ENST00000622021.4
CDS CCA 90 bp CAGTCGTCATTCAGCCAGTACTTGCGCTTCTCGATTCTGACCAGCTaGATCTCGCCCAGTTCCTCGTCCACAGTCACGTCGTATGAATCC +
Preference number: 5 (lower is better)
Translates to: QSSFSQYLRFSILTS*ISPSSSSTVTSYES
Trigger: GGATTCATACGACGTGACTGTGGACGAGGAACTGGGCGAGATCCAGCTGGTCAGAATCGAGAAGCGCAAGTACTGGCTGAATGACGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS-3UTR CAA 90 bp GTGTGCCACCAGCAGCTTGAAAATGGGGTGCACAGCAGGCAGCTGGCGGTACATATGGGGACAATCTTGTaGGCCAGGTTCTTATACAGC +
Preference number: 5 (lower is better)
Translates to: VCHQQLENGVHSRQLAVHMGTIL*ARFLYS
Trigger: GCTGTATAAGAACCTGGCCAACAAGATTGTCCCCAT...ATGTACCGCCAGCTGCCTGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp TCGCAGATGAGCTGCTCACGGGCCTTGGTGTTGATTGCAATGGTGAATCTCACGTGTGCCACCAGCAGCTaGAAAATGGGGTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: SQMSCSRALVLIAMVNLTCATSS*KMGCTA
Trigger: TGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACA...CGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp AGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAATCGGGCCATGGCTTCTCACGGGCCTTGGTGTaGATTGCAATGGTGAATCTC +
Preference number: 5 (lower is better)
Translates to: SNHADNGLEVLAESGHGFSRALV*IAMVNL
Trigger: GAGATTCACCATTGCAATCAACACCAAGGCCCGTGA...GAAGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAAGCTGCTCACGGGCCTaGGTGTTGATTGCAATGGTG +
Preference number: 5 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGSCSRA*VLIAMV
Trigger: CACCATTGCAATCAACACCAAGGCCCGTGAGCAGCT...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCCCGCCCCCTGTGGCGTaGGCCTTGTCAAAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAPPPVA*ALSKRP
Trigger: TGGCCTCTTTGACAAGGCCAACGCCACAGGGGGCGG...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGGGGAAGCCTGAGGACTaGCGGCCCCGCATGCCGTAC +
Preference number: 5 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWGKPED*RPRMPY
Trigger: GTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCCC...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTCGTACTGGCCGAAGTaGACCGCGGCGTGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWSYWPK*TAACWA
Trigger: CGCCCAGCACGCCGCGGTCAACTTCGGCCAGTACGA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CAA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGGCAGCTGCTTCTTCTaGTTGCGCTCAGCAATCACG +
Preference number: 5 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGGSCFF*LRSAIT
Trigger: CGTGATTGCTGAGCGCAACAAGAAGAAGCAGCTGCC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS GCA 90 bp CAAACTGGATATCACGGGGTAAATCCTTGTGGCATTTGGCATCGATaGTCAAGGGGAAGCCAGGGTTCCACTCCATCCATCTCGCGTCCA +
Preference number: 5 (lower is better)
Translates to: QTGYHGVNPCGIWHR*SRGSQGSTPSISRP
Trigger: TGGACGCGAGATGGATGGAGTGGAACCCTGGCTTCCCCTTGAGCATCGATGCCAAATGCCACAAGGATTTACCCCGTGATATCCAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS CCA 90 bp AGACTGGCAGTGTGCTCAGATGGCCACACTGTTCGGAATCCGGTCTaGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTTGTTGCGCTC +
Preference number: 5 (lower is better)
Translates to: RLAVCSDGHTVRNPV*GQVVIWQLLLLVAL
Trigger: GAGCGCAACAAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGTGTGGCCATCTGAGCACACTGCCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GAAAATGTTCCCTTGCTGGACCTCCTGCTCCAAGCTGAGCTGCCGCTCCAGGCTAAAGCCAGTCGTATTTaGCATCCGAAGGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: ENVPLLDLLLQAELPLQAKASRI*HPKGGK
Trigger: TTTTCCTCCCTTCGGATGCAAAATACGACTGGCTTT...AGCCTGGAGCGGCAGCTCAGCTTGGAGCAGGAGGTCCAGCAAGGGAACATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp ATAGGGTTCTCATCTCCCGGGATTTGGTTGAGCTGGATGGCAATGGGGACAATCTGTGCCACCAGCAGCTaGAAAATGGGGTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: IGFSSPGIWLSWMAMGTICATSS*KMGCTA
Trigger: TGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACA...GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAGAACCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCCCGCCCCCTGTGGCGTaGGCCTTGTCAAAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCPPPVA*ALSKRP
Trigger: TGGCCTCTTTGACAAGGCCAACGCCACAGGGGGCGG...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTCCATGCCCCGGGCCTaGATGGCCTCGGGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWSMPRA*MASGKH
Trigger: GTGCTTTCCCGAGGCCATCAAGGCCCGGGGCATGGA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAATCCATGCCCCGGGCCTaGATGGCCTCGGGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: MQFPEDQRINGKVLASEESMPRA*MASGKH
Trigger: GTGCTTTCCCGAGGCCATCAAGGCCCGGGGCATGGA...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAAGCTGCTTCTTCTTGTaGCGCTCAGCAATCACGCTG +
Preference number: 5 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGSCFFL*RSAITL
Trigger: CAGCGTGATTGCTGAGCGCAACAAGAAGAAGCAGCT...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAAAGCTGCTTCTTCTTGTaGCGCTCAGCAATCACGCTG +
Preference number: 5 (lower is better)
Translates to: LLVALSNHADNGLEVLAESCFFL*RSAITL
Trigger: CAGCGTGATTGCTGAGCGCAACAAGAAGAAGCAGCT...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CTTCTTGTTGCGCTCAGCAATCACGCTGACAATGGCCTCGAGGTTCTTGCGGAAGATGAAAATGTTCCCTaGCTGGACCTCCTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: LLVALSNHADNGLEVLAEDENVP*LDLLLQ
Trigger: TTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATC...TTCCGCAAGAACCTCGAGGCCATTGTCAGCGTGATTGCTGAGCGCAACAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATCACGGGCCTTGGTGTaGATTGCAATGGTGAATCTC +
Preference number: 5 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGSRALV*IAMVNL
Trigger: GAGATTCACCATTGCAATCAACACCAAGGCCCGTGA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTCCGCCCCCTGTGGCGTaGGCCTTGTCAAAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSPPPVA*ALSKRP
Trigger: TGGCCTCTTTGACAAGGCCAACGCCACAGGGGGCGG...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGGGAAGCCTGAGGACTaGCGGCCCCGCATGCCGTAC +
Preference number: 5 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKGKPED*RPRMPY
Trigger: GTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCCC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCCGGCTCTTGACCGACTaGGGGAAGCCTGAGGACTTG +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTARLLTD*GKPEDL
Trigger: CAAGTCCTCAGGCTTCCCCAAGTCGGTCAAGAGCCG...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCAGCTGCTCCCGGCTCTaGACCGACTTGGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCSCSRL*TDLGKP
Trigger: AGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGCT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGAGCTGCTCCCGGCTCTaGACCGACTTGGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: SMQFPEDQRINGKVLASESCSRL*TDLGKP
Trigger: AGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGCT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTGGAACATGTCGTACTGGCCGAAGTaGACCGCGGCGTGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: LTKIFSKSAKSFQEDWNMSYWPK*TAACWA
Trigger: CGCCCAGCACGCCGCGGTCAACTTCGGCCAGTACGA...CATGTTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAGGTCGTGATTTGCTGTaGCTGCTTGGTGTGGAAATG +
Preference number: 5 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGGRDLL*LLGVEM
Trigger: CATTTCCACACCAAGCAGCAACAGCAAATCACGACC...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAAACAGCTGGCCGAAGTaGACCGCGGCGTGCTGGGCG +
Preference number: 5 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKNSWPK*TAACWA
Trigger: CGCCCAGCACGCCGCGGTCAACTTCGGCCAGCTGTT...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000542434.5
ENST00000622021.4
CDS-3UTR CAA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGAATGGGGACAATCTTGTaGGCCAGGTTCTTATACAGC +
Preference number: 5 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGMGTIL*ARFLYS
Trigger: GCTGTATAAGAACCTGGCCAACAAGATTGTCCCCAT...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGTCTCCCGGGATTTGGTaGAGCTGGATGGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: QFPEDQRINGKVLASEEESPGIW*SWMAMG
Trigger: CCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGA...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCTCTCCCGGGATTTGGTaGAGCTGGATGGCAATGGGG +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTASPGIW*SWMAMG
Trigger: CCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGA...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAACCTGTGGCGTTGGCCTaGTCAAAGAGGCCACACTCG +
Preference number: 5 (lower is better)
Translates to: MQFPEDQRINGKVLASEEPVALA*SKRPHS
Trigger: CGAGTGTGGCCTCTTTGACAAGGCCAACGCCACAGG...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGGGAAGCCTGAGGACTaGCGGCCCCGCATGCCGTAC +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSGKPED*RPRMPY
Trigger: GTACGGCATGCGGGGCCGCAAGTCCTCAGGCTTCCC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCCGGCTCTTGACCGACTaGGGGAAGCCTGAGGACTTG +
Preference number: 5 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCRLLTD*GKPEDL
Trigger: CAAGTCCTCAGGCTTCCCCAAGTCGGTCAAGAGCCG...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGCGGCTCTTGACCGACTaGGGGAAGCCTGAGGACTTG +
Preference number: 5 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWRLLTD*GKPEDL
Trigger: CAAGTCCTCAGGCTTCCCCAAGTCGGTCAAGAGCCG...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGATGGTCACCACGCCCTaGGCAGTCGGTGGCGGGGCT +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSMVTTP*AVGGGA
Trigger: AGCCCCGCCACCGACTGCCAAGGGCGTGGTGACCAT...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374391.7
ENST00000610656.4
CDS-3UTR CAA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCATGGCCTCGAGGTTCTaGCGGAATCGGGCCATGGCT +
Preference number: 5 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCMASRF*RNRAMA
Trigger: AGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCAT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAATGGCCTCGAGGTTCTaGCGGAATCGGGCCATGGCT +
Preference number: 5 (lower is better)
Translates to: MQFPEDQRINGKVLASEEMASRF*RNRAMA
Trigger: AGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCAT...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGGGCAGCTGCTTCTTCTaGTTGCGCTCAGCAATCACG +
Preference number: 5 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWGSCFF*LRSAIT
Trigger: CGTGATTGCTGAGCGCAACAAGAAGAAGCAGCTGCC...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS TCA 90 bp TTTTGCCGTGTTTCCAGTTCTTTACGTCGGTGTTGCTTGAGAATGTaGATTTGGTCATCTCGGGCCAACTTTGCGCGTCCATCCCTCAGG +
Preference number: 5 (lower is better)
Translates to: FCRVSSSLRRCCLRM*IWSSRANFARPSLR
Trigger: CCTGAGGGATGGACGCGCAAAGTTGGCCCGAGATGACCAAATTCACATTCTCAAGCAACACCGACGTAAAGAACTGGAAACACGGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGACTCCATCCATCGATATaGTTTTTGCCGTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGLHPSI*FLPCFQ
Trigger: CTGGAAACACGGCAAAAACAATATCGATGGATGGAG...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATAGGGTTCTCATCTCCCGGGATTTGGTTGAGCTGGATGGCAATGGGGACAATCATGTGCATGAAGCGGTaGATGAACAGGTTCTCCATC +
Preference number: 5 (lower is better)
Translates to: IGFSSPGIWLSWMAMGTIMCMKR*MNRFSI
Trigger: GATGGAGAACCTGTTCATCAACCGCTTCATGCACAT...GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAGAACCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp TACAGCAAGCAGATGGGAGCGGCCAGGAACTGGAGTGTGCAGGGGTCTGTTTTGCGCTCAGAAATAGTGTaGCTGATCTTGACAAAGATT +
Preference number: 5 (lower is better)
Translates to: YSKQMGAARNWSVQGSVLRSEIV*LILTKI
Trigger: AATCTTTGTCAAGATCAGCAACACTATTTCTGAGCG...CAAAACAGACCCCTGCACACTCCAGTTCCTGGCCGCTCCCATCTGCTTGCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp ATAGGGTTCTCATCTCCCGGGATTTGGTTGAGCTGGATGGCAATGGGGACAATCGCAATGGGGACAATCTaGTTGGCCAGGTTCTTATAC +
Preference number: 5 (lower is better)
Translates to: IGFSSPGIWLSWMAMGTIAMGTI*LARFLY
Trigger: GTATAAGAACCTGGCCAACAAGATTGTCCCCATTGC...GATTGTCCCCATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAGAACCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCAGCTGCTCACGGGCCTaGGTGTTGATTGCAATGGTG +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTASCSRA*VLIAMV
Trigger: CACCATTGCAATCAACACCAAGGCCCGTGAGCAGCT...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTCCATGCCCCGGGCCTaGATGGCCTCGGGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSSMPRA*MASGKH
Trigger: GTGCTTTCCCGAGGCCATCAAGGCCCGGGGCATGGA...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS GCA 90 bp CAAACTGGATATCACGGGGTAAATCCTTGTGGCATTTGGCATCGATaGTCAAGGGGAAGCCAGGGTTCCACTCCATCCATCGATATTGTT +
Preference number: 5 (lower is better)
Translates to: QTGYHGVNPCGIWHR*SRGSQGSTPSIDIV
Trigger: AACAATATCGATGGATGGAGTGGAACCCTGGCTTCCCCTTGAGCATCGATGCCAAATGCCACAAGGATTTACCCCGTGATATCCAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS CCA 90 bp TTTCACTATCAAACTGGATATCACGGGGTAAATCCTTGTGGCATTTaGCATCGATGCTCAAGGGGAAGCCAGGGTTCCACTCCATCCATC +
Preference number: 5 (lower is better)
Translates to: FHYQTGYHGVNPCGI*HRCSRGSQGSTPSI
Trigger: GATGGATGGAGTGGAACCCTGGCTTCCCCTTGAGCATCGATGCCAAATGCCACAAGGATTTACCCCGTGATATCCAGTTTGATAGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS-3UTR CAA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGCAGGGGTCTGTTTTGTaGGCATCGATGCCATCCAGC +
Preference number: 5 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWQGSVL*ASMPSS
Trigger: GCTGGATGGCATCGATGCCAACAAAACAGACCCCTG...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAACAGGGGTCTGTTTTGTaGGCATCGATGCCATCCAGC +
Preference number: 5 (lower is better)
Translates to: MQFPEDQRINGKVLASEEQGSVL*ASMPSS
Trigger: GCTGGATGGCATCGATGCCAACAAAACAGACCCCTG...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGTGCAGGGGTCTGTTTaGTTGGCATCGATGCCATCC +
Preference number: 5 (lower is better)
Translates to: MQFPEDQRINGKVLASEEVQGSV*LASMPS
Trigger: GGATGGCATCGATGCCAACAAAACAGACCCCTGCAC...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGCTCATCTCCCGGGATTaGGTTGAGCTGGATGGCAAT +
Preference number: 5 (lower is better)
Translates to: QFPEDQRINGKVLASEEELISRD*VELDGN
Trigger: ATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAG...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TTCTCGATAAAATGCTCTTCTGGGTACATGCCCAGGAACAGCTCGTTTTCCTGGGAACGCACCCAGATTTaGGCCAAAAGCCAGTCGTAT +
Preference number: 5 (lower is better)
Translates to: FSIKCSSGYMPRNSSFSWERTQI*AKSQSY
Trigger: ATACGACTGGCTTTTGGCCAAAATCTGGGTGCGTTC...CCAGGAAAACGAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGCAGCTGGCGGTACATaGCAATGCCAAAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: QFPEDQRINGKVLASEEEAAGGT*QCQKPQ
Trigger: CTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTGC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCGCAGCTGGCGGTACATaGCAATGCCAAAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAAAGGT*QCQKPQ
Trigger: CTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTGC...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGTGTGCCACCAGCAGCTaGAAAATGGGGTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: SMQFPEDQRINGKVLASECATSS*KMGCTA
Trigger: TGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACA...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGAGCTGCTCACGGGCCTaGGTGTTGATTGCAATGGTG +
Preference number: 5 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWSCSRA*VLIAMV
Trigger: CACCATTGCAATCAACACCAAGGCCCGTGAGCAGCT...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CTGCCAGTGATTCATGACCCGCTCAGAAATAGTGTTGCTGATCTTGACAAAGATAGCTGCTCACGGGCCTaGGTGTTGATTGCAATGGTG +
Preference number: 5 (lower is better)
Translates to: LPVIHDPLRNSVADLDKDSCSRA*VLIAMV
Trigger: CACCATTGCAATCAACACCAAGGCCCGTGAGCAGCT...ATCTTTGTCAAGATCAGCAACACTATTTCTGAGCGGGTCATGAATCACTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGAGCTGCTCCCGGCTCTaGACCGACTTGGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSSCSRL*TDLGKP
Trigger: AGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGCT...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GTCTGTTTTGTTGGCATCGATGCCATCCAGCAGCTCAAAGTCCACGATGAAAATAGCTGCTTCTTCTTGTaGCGCTCAGCAATCACGCTG +
Preference number: 5 (lower is better)
Translates to: VCFVGIDAIQQLKVHDENSCFFL*RSAITL
Trigger: CAGCGTGATTGCTGAGCGCAACAAGAAGAAGCAGCT...ATTTTCATCGTGGACTTTGAGCTGCTGGATGGCATCGATGCCAACAAAACAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCTCATTCAGCCAGTACTaGCGCTTCTCGATTCTGACC +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTASFSQY*RFSILT
Trigger: GGTCAGAATCGAGAAGCGCAAGTACTGGCTGAATGA...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CGTGATTTGCTGTTGCTGCTTGGTGTGGAAATGCTGAGCTGGGTGTGGACAGGATTCTTTACGTCGGTGTaGCTTGAGAATGTGAATTTG +
Preference number: 5 (lower is better)
Translates to: RDLLLLLGVEMLSWVWTGFFTSV*LENVNL
Trigger: CAAATTCACATTCTCAAGCAACACCGACGTAAAGAA...TCCTGTCCACACCCAGCTCAGCATTTCCACACCAAGCAGCAACAGCAAATCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCTCACGGGGTAAATCCTaGTGGCATTTGGCATCGATG +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTASRGKS*WHLASM
Trigger: CATCGATGCCAAATGCCACAAGGATTTACCCCGTGA...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGTCACGGGGTAAATCCTaGTGGCATTTGGCATCGATG +
Preference number: 5 (lower is better)
Translates to: QFPEDQRINGKVLASEEESRGKS*WHLASM
Trigger: CATCGATGCCAAATGCCACAAGGATTTACCCCGTGA...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GTGCATGAAGCGGTTGATGAACAGGTTCTCCATCGCTTTGGAGTAATTCAGAACGATGAAAATGTTCCCTaGCTGGACCTCCTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: VHEAVDEQVLHRFGVIQNDENVP*LDLLLQ
Trigger: TTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATC...GTTCTGAATTACTCCAAAGCGATGGAGAACCTGTTCATCAACCGCTTCATGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTCAGGGGTCTGTTTTGTaGGCATCGATGCCATCCAGC +
Preference number: 5 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSQGSVL*ASMPSS
Trigger: GCTGGATGGCATCGATGCCAACAAAACAGACCCCTG...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAACTCATCTCCCGGGATTaGGTTGAGCTGGATGGCAAT +
Preference number: 5 (lower is better)
Translates to: MQFPEDQRINGKVLASEELISRD*VELDGN
Trigger: ATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAG...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGAACGCACCCAGATTTaGGCCAAAAGCCAGTCGTAT +
Preference number: 5 (lower is better)
Translates to: QFPEDQRINGKVLASEEEERTQI*AKSQSY
Trigger: ATACGACTGGCTTTTGGCCAAAATCTGGGTGCGTTC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGCAGCTGGCGGTACATaGCAATGCCAAAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: SMQFPEDQRINGKVLASEAAGGT*QCQKPQ
Trigger: CTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTGC...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGCAGCTGGCGGTACATaGCAATGCCAAAAACCTCAG +
Preference number: 5 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCAAGGT*QCQKPQ
Trigger: CTGAGGTTTTTGGCATTGCAATGTACCGCCAGCTGC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTGTGCCACCAGCAGCTaGAAAATGGGGTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSCATSS*KMGCTA
Trigger: TGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCTCACGGGCCTTGGTGTaGATTGCAATGGTGAATCTC +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTASRALV*IAMVNL
Trigger: GAGATTCACCATTGCAATCAACACCAAGGCCCGTGA...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGCCTGTGGCGTTGGCCTaGTCAAAGAGGCCACACTCG +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSPVALA*SKRPHS
Trigger: CGAGTGTGGCCTCTTTGACAAGGCCAACGCCACAGG...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATTCATGACCCGCTCAGAAATAGTGTTGCTGATCTTGACAAAGATTTTCTCAAAAGCTGCTCCCGGCTCTaGACCGACTTGGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: IHDPLRNSVADLDKDFLKSCSRL*TDLGKP
Trigger: AGGCTTCCCCAAGTCGGTCAAGAGCCGGGAGCAGCT...TTTGAGAAAATCTTTGTCAAGATCAGCAACACTATTTCTGAGCGGGTCATGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGATGGCCTCGAGGTTCTaGCGGAATCGGGCCATGGCT +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSMASRF*RNRAMA
Trigger: AGCCATGGCCCGATTCCGCAAGAACCTCGAGGCCAT...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGAGCTGCTTCTTCTTGTaGCGCTCAGCAATCACGCTG +
Preference number: 5 (lower is better)
Translates to: SMQFPEDQRINGKVLASESCFFL*RSAITL
Trigger: CAGCGTGATTGCTGAGCGCAACAAGAAGAAGCAGCT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAAGCTGCTTCTTCTTGTaGCGCTCAGCAATCACGCTG +
Preference number: 5 (lower is better)
Translates to: MQFPEDQRINGKVLASEESCFFL*RSAITL
Trigger: CAGCGTGATTGCTGAGCGCAACAAGAAGAAGCAGCT...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTGGCAGCTGCTTCTTCTaGTTGCGCTCAGCAATCACG +
Preference number: 5 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSGSCFF*LRSAIT
Trigger: CGTGATTGCTGAGCGCAACAAGAAGAAGCAGCTGCC...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCGGTCGTGATTTGCTGTaGCTGCTTGGTGTGGAAATG +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAGRDLL*LLGVEM
Trigger: CATTTCCACACCAAGCAGCAACAGCAAATCACGACC...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCAAATCCTTGTGGCATTaGGCATCGATGCTCAAGGGG +
Preference number: 5 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCKSLWH*ASMLKG
Trigger: CCCCTTGAGCATCGATGCCAAATGCCACAAGGATTT...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGAAATCCTTGTGGCATTaGGCATCGATGCTCAAGGGG +
Preference number: 5 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWKSLWH*ASMLKG
Trigger: CCCCTTGAGCATCGATGCCAAATGCCACAAGGATTT...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGAAATCCTTGTGGCATTaGGCATCGATGCTCAAGGGG +
Preference number: 5 (lower is better)
Translates to: SMQFPEDQRINGKVLASEKSLWH*ASMLKG
Trigger: CCCCTTGAGCATCGATGCCAAATGCCACAAGGATTT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GTTCTTGCGGAATCGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAATGCTCCGCTCAGAAATAGTGTaGCTGATCTTGACAAAGATT +
Preference number: 5 (lower is better)
Translates to: VLAESGHGFLHRLLDKMLRSEIV*LILTKI
Trigger: AATCTTTGTCAAGATCAGCAACACTATTTCTGAGCG...GAGCATTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCGATTCCGCAAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGATGAAAATGTTCCCTaGCTGGACCTCCTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: SMQFPEDQRINGKVLASEDENVP*LDLLLQ
Trigger: TTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATC...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGATGAAAATGTTCCCTaGCTGGACCTCCTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCDENVP*LDLLLQ
Trigger: TTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAACAGGGGTCTGTTTTGTaGGCATCGATGCCATCCAGC +
Preference number: 5 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKQGSVL*ASMPSS
Trigger: GCTGGATGGCATCGATGCCAACAAAACAGACCCCTG...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGTGCAGGGGTCTGTTTaGTTGGCATCGATGCCATCC +
Preference number: 5 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKVQGSV*LASMPS
Trigger: GGATGGCATCGATGCCAACAAAACAGACCCCTGCAC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGGGGACAATCTTGTaGGCCAGGTTCTTATACAGC +
Preference number: 5 (lower is better)
Translates to: QFPEDQRINGKVLASEEEMGTIL*ARFLYS
Trigger: GCTGTATAAGAACCTGGCCAACAAGATTGTCCCCAT...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGGCAATGGGGACAATCTaGTTGGCCAGGTTCTTATAC +
Preference number: 5 (lower is better)
Translates to: QFPEDQRINGKVLASEEEAMGTI*LARFLY
Trigger: GTATAAGAACCTGGCCAACAAGATTGTCCCCATTGC...CTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTCTCATCTCCCGGGATTaGGTTGAGCTGGATGGCAAT +
Preference number: 5 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSLISRD*VELDGN
Trigger: ATTGCCATCCAGCTCAACCAAATCCCGGGAGATGAG...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAACGCACCCAGATTTaGGCCAAAAGCCAGTCGTAT +
Preference number: 5 (lower is better)
Translates to: MQFPEDQRINGKVLASEEERTQI*AKSQSY
Trigger: ATACGACTGGCTTTTGGCCAAAATCTGGGTGCGTTC...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCGAACGCACCCAGATTTaGGCCAAAAGCCAGTCGTAT +
Preference number: 5 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCERTQI*AKSQSY
Trigger: ATACGACTGGCTTTTGGCCAAAATCTGGGTGCGTTC...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAATGTGCCACCAGCAGCTaGAAAATGGGGTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKCATSS*KMGCTA
Trigger: TGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACA...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAGGCAGCTGCTTCTTCTaGTTGCGCTCAGCAATCACG +
Preference number: 5 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKGSCFF*LRSAIT
Trigger: CGTGATTGCTGAGCGCAACAAGAAGAAGCAGCTGCC...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGGGTCGTGATTTGCTGTaGCTGCTTGGTGTGGAAATG +
Preference number: 5 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWGRDLL*LLGVEM
Trigger: CATTTCCACACCAAGCAGCAACAGCAAATCACGACC...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS TCA 90 bp GATATTGTTTTTGCCGTGTTTCCAGTTCTTTACGTCGGTGTTGCTTaGGAATGTGAATTTGGTCATCTCGGGCCAACTTTGCGCGTCCAT +
Preference number: 5 (lower is better)
Translates to: DIVFAVFPVLYVGVA*ECEFGHLGPTLRVH
Trigger: ATGGACGCGCAAAGTTGGCCCGAGATGACCAAATTCACATTCTCAAGCAACACCGACGTAAAGAACTGGAAACACGGCAAAAACAATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCATTCAGCCAGTACTaGCGCTTCTCGATTCTGACC +
Preference number: 5 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSSFSQY*RFSILT
Trigger: GGTCAGAATCGAGAAGCGCAAGTACTGGCTGAATGA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCCTTGAGAATGTGAATTaGGTCATCTCGGGCCAACTT +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTALENVN*VISGQL
Trigger: AAGTTGGCCCGAGATGACCAAATTCACATTCTCAAG...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAATGTGCATGAAGCGGTaGATGAACAGGTTCTCCATC +
Preference number: 5 (lower is better)
Translates to: MQFPEDQRINGKVLASEEMCMKR*MNRFSI
Trigger: GATGGAGAACCTGTTCATCAACCGCTTCATGCACAT...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGATGTGCATGAAGCGGTaGATGAACAGGTTCTCCATC +
Preference number: 5 (lower is better)
Translates to: SMQFPEDQRINGKVLASEMCMKR*MNRFSI
Trigger: GATGGAGAACCTGTTCATCAACCGCTTCATGCACAT...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGATGGGGACAATCTTGTaGGCCAGGTTCTTATACAGC +
Preference number: 5 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWMGTIL*ARFLYS
Trigger: GCTGTATAAGAACCTGGCCAACAAGATTGTCCCCAT...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCAAAGCCAGTCGTATTTaGCATCCGAAGGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAKASRI*HPKGGK
Trigger: TTTTCCTCCCTTCGGATGCAAAATACGACTGGCTTT...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGTGCCACCAGCAGCTaGAAAATGGGGTGCACAGCA +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSCATSS*KMGCTA
Trigger: TGCTGTGCACCCCATTTTCAAGCTGCTGGTGGCACA...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GCTCTGTGTAGAATGGGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCACGGGCCTTGGTGTaGATTGCAATGGTGAATCTC +
Preference number: 5 (lower is better)
Translates to: ALCRMGPYGVYTLINLCSSRALV*IAMVNL
Trigger: GAGATTCACCATTGCAATCAACACCAAGGCCCGTGA...ACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACCCATTCTACACAGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGAGCTGCTCACGGGCCTaGGTGTTGATTGCAATGGTG +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSSCSRA*VLIAMV
Trigger: CACCATTGCAATCAACACCAAGGCCCGTGAGCAGCT...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGGCAGCTGCTTCTTCTaGTTGCGCTCAGCAATCACG +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSGSCFF*LRSAIT
Trigger: CGTGATTGCTGAGCGCAACAAGAAGAAGCAGCTGCC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAACTTGAGAATGTGAATTaGGTCATCTCGGGCCAACTT +
Preference number: 5 (lower is better)
Translates to: MQFPEDQRINGKVLASEELENVN*VISGQL
Trigger: AAGTTGGCCCGAGATGACCAAATTCACATTCTCAAG...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TCTATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGCTCCATCCATCGATATaGTTTTTGCCGTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: SMQFPEDQRINGKVLASELHPSI*FLPCFQ
Trigger: CTGGAAACACGGCAAAAACAATATCGATGGATGGAG...CTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCATAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCCTCCATCCATCGATATaGTTTTTGCCGTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCLHPSI*FLPCFQ
Trigger: CTGGAAACACGGCAAAAACAATATCGATGGATGGAG...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp TTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTGGAACATGTCACGGGGTAAATCCTaGTGGCATTTGGCATCGATG +
Preference number: 5 (lower is better)
Translates to: LTKIFSKSAKSFQEDWNMSRGKS*WHLASM
Trigger: CATCGATGCCAAATGCCACAAGGATTTACCCCGTGA...CATGTTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp GATCTTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTGGAAGAACGCACCCAGATTTaGGCCAAAAGCCAGTCGTAT +
Preference number: 5 (lower is better)
Translates to: DLDKDFLKVGEVIPRRLEERTQI*AKSQSY
Trigger: ATACGACTGGCTTTTGGCCAAAATCTGGGTGCGTTC...TTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTCATTCAGCCAGTACTaGCGCTTCTCGATTCTGACC +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSSFSQY*RFSILT
Trigger: GGTCAGAATCGAGAAGCGCAAGTACTGGCTGAATGA...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCTTCTTTACGTCGGTGTaGCTTGAGAATGTGAATTTG +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTAFFTSV*LENVNL
Trigger: CAAATTCACATTCTCAAGCAACACCGACGTAAAGAA...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAATGTGCATGAAGCGGTaGATGAACAGGTTCTCCATC +
Preference number: 5 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKMCMKR*MNRFSI
Trigger: GATGGAGAACCTGTTCATCAACCGCTTCATGCACAT...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAAGAGATGTGACTGCCCGCTCAGAAATAGTGTaGCTGATCTTGACAAAGATT +
Preference number: 5 (lower is better)
Translates to: RSKNKWKGTGLGGRDVTARSEIV*LILTKI
Trigger: AATCTTTGTCAAGATCAGCAACACTATTTCTGAGCG...GGCAGTCACATCTCTTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGATGAAAATGTTCCCTaGCTGGACCTCCTGCTCCAA +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSDENVP*LDLLLQ
Trigger: TTGGAGCAGGAGGTCCAGCAAGGGAACATTTTCATC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GATCTTGACAAAGATTTTCTCAAAGTCGGCGAAGTCATTCCAAGAAGACTGGAAATGGGGACAATCTTGTaGGCCAGGTTCTTATACAGC +
Preference number: 5 (lower is better)
Translates to: DLDKDFLKVGEVIPRRLEMGTIL*ARFLYS
Trigger: GCTGTATAAGAACCTGGCCAACAAGATTGTCCCCAT...TTCCAGTCTTCTTGGAATGACTTCGCCGACTTTGAGAAAATCTTTGTCAAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAACTTGAGAATGTGAATTaGGTCATCTCGGGCCAACTT +
Preference number: 5 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKLENVN*VISGQL
Trigger: AAGTTGGCCCGAGATGACCAAATTCACATTCTCAAG...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTTCTTTACGTCGGTGTaGCTTGAGAATGTGAATTTG +
Preference number: 5 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWFFTSV*LENVNL
Trigger: CAAATTCACATTCTCAAGCAACACCGACGTAAAGAA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp CATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCCGCTCAGAAATAGTGTaGCTGATCTTGACAAAGATT +
Preference number: 5 (lower is better)
Translates to: HVSNKNRHLSVVVICCCCRSEIV*LILTKI
Trigger: AATCTTTGTCAAGATCAGCAACACTATTTCTGAGCG...GCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTTGGAGACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAACGCTCAGAAATAGTGTaGCTGATCTTGACAAAGATT +
Preference number: 5 (lower is better)
Translates to: MQFPEDQRINGKVLASEERSEIV*LILTKI
Trigger: AATCTTTGTCAAGATCAGCAACACTATTTCTGAGCG...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGGCAATGGGGACAATCTaGTTGGCCAGGTTCTTATAC +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSAMGTI*LARFLY
Trigger: GTATAAGAACCTGGCCAACAAGATTGTCCCCATTGC...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp GGTCCCTATGGTGTTTACACTTTGATCAATCTATGCAGTTCCCTGAAGATCAAAAAAGCCAGTCGTATTTaGCATCCGAAGGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: GPYGVYTLINLCSSLKIKKASRI*HPKGGK
Trigger: TTTTCCTCCCTTCGGATGCAAAATACGACTGGCTTT...TTTGATCTTCAGGGAACTGCATAGATTGATCAAAGTGTAAACACCATAGGGACC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATTCATGACCCGCTCAGAAATAGTGTTGCTGATCTTGACAAAGATTTTCTCAAAATGTGCATGAAGCGGTaGATGAACAGGTTCTCCATC +
Preference number: 5 (lower is better)
Translates to: IHDPLRNSVADLDKDFLKMCMKR*MNRFSI
Trigger: GATGGAGAACCTGTTCATCAACCGCTTCATGCACAT...TTTGAGAAAATCTTTGTCAAGATCAGCAACACTATTTCTGAGCGGGTCATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000612635.4
ENST00000622238.1
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGAAAGCCAGTCGTATTTaGCATCCGAAGGGAGGAAAA +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSKASRI*HPKGGK
Trigger: TTTTCCTCCCTTCGGATGCAAAATACGACTGGCTTT...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ATGCAGTTCCCTGAAGATCAAAGAATAAATGGAAAGGTACTGGCCTCGGAGGAATATGGTGTTTACACTTaGATCAATCTATGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: MQFPEDQRINGKVLASEEYGVYT*INLCSS
Trigger: GGAACTGCATAGATTGATCAAAGTGTAAACACCATA...TTCCTCCGAGGCCAGTACCTTTCCATTTATTCTTTGATCTTCAGGGAACTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp AACAAGAATAGACATCTATCAGTGGTCGTGATTTGCTGTTGCTGCTTGGTGTGGTATGGTGTTTACACTTaGATCAATCTATGCAGTTCC +
Preference number: 5 (lower is better)
Translates to: NKNRHLSVVVICCCCLVWYGVYT*INLCSS
Trigger: GGAACTGCATAGATTGATCAAAGTGTAAACACCATA...CCACACCAAGCAGCAACAGCAAATCACGACCACTGATAGATGTCTATTCTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS-3UTR CAA 90 bp ACAGAAAATAATCATCCCATGTCTCCAACAAGAATAGACATCTATCAGTGGTCGTTCTTTACGTCGGTGTaGCTTGAGAATGTGAATTTG +
Preference number: 5 (lower is better)
Translates to: TENNHPMSPTRIDIYQWSFFTSV*LENVNL
Trigger: CAAATTCACATTCTCAAGCAACACCGACGTAAAGAA...CGACCACTGATAGATGTCTATTCTTGTTGGAGACATGGGATGATTATTTTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS GCA 72 bp GCCGGGGTGGGCGACCCAGCCAGGTCTGCGGAGCGGTaGCCGGCGGCAACCCCCTCACGGACGCTGGGACTC +
Preference number: 6 (lower is better)
Translates to: AGVGDPARSAER*PAATPSRTLGL
Trigger: GAGTCCCAGCGTCCGTGAGGGGGTTGCCGCCGGGCACCGCTCCGCAGACCTGGCTGGGTCGCCCACCCCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481117.1
ENST00000617751.4
CDS CCA 72 bp TCGGCCGTGAACCTGGCTCAGGGGGCGCAGCCGGGGTaGGCGACCCAGCCAGGTCTGCGGAGCGGTGCCCGG +
Preference number: 6 (lower is better)
Translates to: SAVNLAQGAQPG*ATQPGLRSGAR
Trigger: CCGGGCACCGCTCCGCAGACCTGGCTGGGTCGCCCACCCCGGCTGCGCCCCCTGAGCCAGGTTCACGGCCGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481117.1
ENST00000617751.4
CDS TCA 72 bp CAGTGCCGGCGAACCACTGGCTGCCAGTGGCCACGGTaGCCGTGTAGGAGGGCATGGCGCGGGCCGCGGGAG +
Preference number: 6 (lower is better)
Translates to: QCRRTTGCQWPR*PCRRAWRGPRE
Trigger: CTCCCGCGGCCCGCGCCATGCCCTCCTACACGGTCACCGTGGCCACTGGCAGCCAGTGGTTCGCCGGCACTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS CCA 72 bp CACGTGCCCACCGCCCCCTGTGGCGTTGGCCTGGAGTaGGAGGTAGAGTGCCCTGAGCGGGTGGCTCCTCCC +
Preference number: 6 (lower is better)
Translates to: HVPTAPCGVGLE*EVECPERVAPP
Trigger: GGGAGGAGCCACCCGCTCAGGGCACTCTACCTCCCACTCCAGGCCAACGCCACAGGGGGCGGTGGGCACGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493336.1
ENST00000612275.1
CDS GCA 72 bp GGCCAGCGCCCTTGGCTGAGCGGGCAGAATCCATCCTaGAAGTCCCGTGCCAGGCCCCGAGGCTGTCCGAGG +
Preference number: 6 (lower is better)
Translates to: GQRPWLSGQNPS*KSRARPRGCPR
Trigger: CCTCGGACAGCCTCGGGGCCTGGCACGGGACTTGCAGGATGGATTCTGCCCGCTCAGCCAAGGGCGCTGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498461.1
ENST00000622032.1
CDS CAA 90 bp CGGGCCCTGCAGTCCGTCCATCCTCTTTCCCCGCGGCCAGCGCCCTaGGCTGAGCGGGCAGAATCCATCCTGCAAGTCCCGTGCCAGGCC +
Preference number: 6 (lower is better)
Translates to: RALQSVHPLSPRPAP*AERAESILQVPCQA
Trigger: GGCCTGGCACGGGACTTGCAGGATGGATTCTGCCCGCTCAGCCAAGGGCGCTGGCCGCGGGGAAAGAGGATGGACGGACTGCAGGGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498461.1
ENST00000622032.1
CDS TCA 72 bp GGTCGCCCTCGTAGTAGATGTCTACCACCTCGGCCGTaGACCTGGCTCAGGGGGCGCAGCCGGGGTGGGCGA +
Preference number: 6 (lower is better)
Translates to: GRPRSRCLPPRP*TWLRGRSRGGR
Trigger: TCGCCCACCCCGGCTGCGCCCCCTGAGCCAGGTTCACGGCCGAGGTGGTAGACATCTACTACGAGGGCGACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481117.1
ENST00000617751.4
CDS GCA 72 bp GTCAGGTCCTTCATGGCCCTCTGCACCATCTGCACGTaGCCACCGCCCCCTGTGGCGTTGGCCTGGAGTGGG +
Preference number: 6 (lower is better)
Translates to: VRSFMALCTICT*PPPPVALAWSG
Trigger: CCCACTCCAGGCCAACGCCACAGGGGGCGGTGGGCACGTGCAGATGGTGCAGAGGGCCATGAAGGACCTGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000493336.1
ENST00000612275.1
CDS CCA 72 bp GCCCTGCCTACCTGGCCGAAGTTGACCGCGGCGTGCTaGGCGGAGGCGGTGAAGATCACCACGGTCAGGTAC +
Preference number: 6 (lower is better)
Translates to: ALPTWPKLTAAC*AEAVKITTVRY
Trigger: GTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGCGGTCAACTTCGGCCAGGTAGGCAGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000498461.1
ENST00000622032.1
CDS TCA 72 bp CGTCCATCCTCTTTCCCCGCGGCCAGCGCCCTTGGCTaGGCGGGCAGAATCCATCCTGCAAGTCCCGTGCCA +
Preference number: 6 (lower is better)
Translates to: RPSSFPAASALG*AGRIHPASPVP
Trigger: TGGCACGGGACTTGCAGGATGGATTCTGCCCGCTCAGCCAAGGGCGCTGGCCGCGGGGAAAGAGGATGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498461.1
ENST00000622032.1
CDS GCA 72 bp TTGGCTGAGCGGGCAGAATCCATCCTGCAAGTCCCGTaGCAGGCCCCGAGGCTGTCCGAGGGTGCAGTACGC +
Preference number: 6 (lower is better)
Translates to: LAERAESILQVP*QAPRLSEGAVR
Trigger: GCGTACTGCACCCTCGGACAGCCTCGGGGCCTGGCACGGGACTTGCAGGATGGATTCTGCCCGCTCAGCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498461.1
ENST00000622032.1
CDS CCA 72 bp CCCAGGAACAGCTGGCCGAAGTTGACCGCGGCGTGCTaGGCGGAGGCGGTGAAGATCACCACGGTCAGGTAC +
Preference number: 6 (lower is better)
Translates to: PRNSWPKLTAAC*AEAVKITTVRY
Trigger: GTACCTGACCGTGGTGATCTTCACCGCCTCCGCCCAGCACGCCGCGGTCAACTTCGGCCAGCTGTTCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542434.5
ENST00000622021.4
CDS CAA 72 bp CAGTCCGTCCATCCTCTTTCCCCGCGGCCAGCGCCCTaGGCTGAGCGGGCAGAATCCATCCTGCAAGTCCCG +
Preference number: 6 (lower is better)
Translates to: QSVHPLSPRPAP*AERAESILQVP
Trigger: CGGGACTTGCAGGATGGATTCTGCCCGCTCAGCCAAGGGCGCTGGCCGCGGGGAAAGAGGATGGACGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498461.1
ENST00000622032.1
CDS TCA 72 bp GGTGCTTCTCGCTGCAGCCCGCCGAGCCCACGAGGCTaGGGTAGATGTAGTCGTCAGTGCCGGCGAACCACT +
Preference number: 6 (lower is better)
Translates to: GASRCSPPSPRG*GRCSRQCRRTT
Trigger: AGTGGTTCGCCGGCACTGACGACTACATCTACCTCAGCCTCGTGGGCTCGGCGGGCTGCAGCGAGAAGCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS CCA 72 bp AGTCCGTCCATCCTCTTTCCCCGCGGCCAGCGCCCTTaGCTGAGCGGGCAGAATCCATCCTGCAAGTCCCGT +
Preference number: 6 (lower is better)
Translates to: SPSILFPRGQRP*LSGQNPSCKSR
Trigger: ACGGGACTTGCAGGATGGATTCTGCCCGCTCAGCCAAGGGCGCTGGCCGCGGGGAAAGAGGATGGACGGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000498461.1
ENST00000622032.1
CDS GCA 72 bp GGGACCCCAGCACCAGCGGGCCTGGGCTGTGAAGTCTaGTCTAGTGCTGAGCACACGACCCTCAGTCATTGC +
Preference number: 6 (lower is better)
Translates to: GTPAPAGLGCEV*SSAEHTTLSHC
Trigger: GCAATGACTGAGGGTCGTGTGCTCAGCACTAGAGCAGACTTCACAGCCCAGGCCCGCTGGTGCTGGGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493336.1
ENST00000612275.1
CDS TCA 72 bp CGCGTCCATCCCTCAGGACAACCTCGACATCGCCGGTaGTCCAGCGGTAGCAGGGGAACTCGATGTAGTCCC +
Preference number: 6 (lower is better)
Translates to: RVHPSGQPRHRR*SSGSRGTRCSP
Trigger: GGGACTACATCGAGTTCCCCTGCTACCGCTGGATCACCGGCGATGTCGAGGTTGTCCTGAGGGATGGACGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS GCA 72 bp GGGGCAGCTGGCCTTCCCACAGTGAGACTGGCAGTGTaGTCAGATGGCCACACTGTTCGGAATCCGGTCTGG +
Preference number: 6 (lower is better)
Translates to: GAAGLPTVRLAV*SDGHTVRNPVW
Trigger: CCAGACCGGATTCCGAACAGTGTGGCCATCTGAGCACACTGCCAGTCTCACTGTGGGAAGGCCAGCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS GCA 72 bp CCGCCCAATCCAATGCAAGGGACTGAACCGTGGGGCTaGAGAGTACAAGAGGGAAGGGTGCGCTCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: PPNPMQGTEPWG*RVQEGRVRSQP
Trigger: TGGCTGGGAGCGCACCCTTCCCTCTTGTACTCTGCAGCCCCACGGTTCAGTCCCTTGCATTGGATTGGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493336.1
ENST00000612275.1
CDS CCA 72 bp AGCCTCCCGCCCAATCCAATGCAAGGGACTGAACCGTaGGGCTGCAGAGTACAAGAGGGAAGGGTGCGCTCC +
Preference number: 6 (lower is better)
Translates to: SLPPNPMQGTEP*GCRVQEGRVRS
Trigger: GGAGCGCACCCTTCCCTCTTGTACTCTGCAGCCCCACGGTTCAGTCCCTTGCATTGGATTGGGCGGGAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000493336.1
ENST00000612275.1
CDS TCA 72 bp AGGGAGGAGCCTCCCGCCCAATCCAATGCAAGGGACTaGACCGTGGGGCTGCAGAGTACAAGAGGGAAGGGT +
Preference number: 6 (lower is better)
Translates to: REEPPAQSNARD*TVGLQSTRGKG
Trigger: ACCCTTCCCTCTTGTACTCTGCAGCCCCACGGTTCAGTCCCTTGCATTGGATTGGGCGGGAGGCTCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000493336.1
ENST00000612275.1
CDS CCA 72 bp TGGCCTTCCCACAGTGAGACTGGCAGTGTGCTCAGATaGCCACACTGTTCGGAATCCGGTCTGGGGACAAGT +
Preference number: 6 (lower is better)
Translates to: WPSHSETGSVLR*PHCSESGLGTS
Trigger: ACTTGTCCCCAGACCGGATTCCGAACAGTGTGGCCATCTGAGCACACTGCCAGTCTCACTGTGGGAAGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS TCA 72 bp GATCTCGCCCAGTTCCTCGTCCACAGTCACGTCGTATaGATCCACCGCGCCACGCTCGAAGTCGTTGTAGAA +
Preference number: 6 (lower is better)
Translates to: DLAQFLVHSHVV*IHRATLEVVVE
Trigger: TTCTACAACGACTTCGAGCGTGGCGCGGTGGATTCATACGACGTGACTGTGGACGAGGAACTGGGCGAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS GCA 72 bp CGGGCCATGGCTTCCTTCACAGGCTTCTCGATAAAATaGTCTTCTGGGTACATGCCCAGGAACAGCTGGCCG +
Preference number: 6 (lower is better)
Translates to: RAMASFTGFSIK*SSGYMPRNSWP
Trigger: CGGCCAGCTGTTCCTGGGCATGTACCCAGAAGAGCATTTTATCGAGAAGCCTGTGAAGGAAGCCATGGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000542434.5
ENST00000622021.4
CDS CCA 72 bp TTCAGCCAGTACTTGCGCTTCTCGATTCTGACCAGCTaGATCTCGCCCAGTTCCTCGTCCACAGTCACGTCG +
Preference number: 6 (lower is better)
Translates to: FSQYLRFSILTS*ISPSSSSTVTS
Trigger: CGACGTGACTGTGGACGAGGAACTGGGCGAGATCCAGCTGGTCAGAATCGAGAAGCGCAAGTACTGGCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS CAA 90 bp ACCTTGTCAAAGAGGCCACACTCGCAGATGAGCTGCTCACGGGCCTaGGTGTTGATTGCAATGGTGAATCTCACGTGTGCCACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TLSKRPHSQMSCSRA*VLIAMVNLTCATSS
Trigger: GCTGCTGGTGGCACACGTGAGATTCACCATTGCAATCAACACCAAGGCCCGTGAGCAGCTCATCTGCGAGTGTGGCCTCTTTGACAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475300.1
ENST00000616521.4
CDS TCA 72 bp AGTCGTCATTCAGCCAGTACTTGCGCTTCTCGATTCTaGCCAGCTGGATCTCGCCCAGTTCCTCGTCCACAG +
Preference number: 6 (lower is better)
Translates to: SRHSASTCASRF*PAGSRPVPRPQ
Trigger: CTGTGGACGAGGAACTGGGCGAGATCCAGCTGGTCAGAATCGAGAAGCGCAAGTACTGGCTGAATGACGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS TCA 72 bp GGAACTCGATGTAGTCCCCGTGGGGCGTCTTCAGCGTaGTGTACTTCAGGTACCAGTCGTCATTCAGCCAGT +
Preference number: 6 (lower is better)
Translates to: GTRCSPRGASSA*CTSGTSRHSAS
Trigger: ACTGGCTGAATGACGACTGGTACCTGAAGTACATCACGCTGAAGACGCCCCACGGGGACTACATCGAGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS CAA 90 bp TTCAGCGTGATGTACTTCAGGTACCAGTCGTCATTCAGCCAGTACTaGCGCTTCTCGATTCTGACCAGCTGGATCTCGCCCAGTTCCTCG +
Preference number: 6 (lower is better)
Translates to: FSVMYFRYQSSFSQY*RFSILTSWISPSSS
Trigger: CGAGGAACTGGGCGAGATCCAGCTGGTCAGAATCGAGAAGCGCAAGTACTGGCTGAATGACGACTGGTACCTGAAGTACATCACGCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS GCA 72 bp TATCACGGGGTAAATCCTTGTGGCATTTGGCATCGATaGTCAAGGGGAAGCCAGGGTTCCACTCCATCCATC +
Preference number: 6 (lower is better)
Translates to: YHGVNPCGIWHR*SRGSQGSTPSI
Trigger: GATGGATGGAGTGGAACCCTGGCTTCCCCTTGAGCATCGATGCCAAATGCCACAAGGATTTACCCCGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS CAA 72 bp ATGTACTTCAGGTACCAGTCGTCATTCAGCCAGTACTaGCGCTTCTCGATTCTGACCAGCTGGATCTCGCCC +
Preference number: 6 (lower is better)
Translates to: MYFRYQSSFSQY*RFSILTSWISP
Trigger: GGGCGAGATCCAGCTGGTCAGAATCGAGAAGCGCAAGTACTGGCTGAATGACGACTGGTACCTGAAGTACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS CAA 90 bp CCGTGTTTCCAGTTCTTTACGTCGGTGTTGCTTGAGAATGTGAATTaGGTCATCTCGGGCCAACTTTGCGCGTCCATCCCTCAGGACAAC +
Preference number: 6 (lower is better)
Translates to: PCFQFFTSVLLENVN*VISGQLCASIPQDN
Trigger: GTTGTCCTGAGGGATGGACGCGCAAAGTTGGCCCGAGATGACCAAATTCACATTCTCAAGCAACACCGACGTAAAGAACTGGAAACACGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS CCA 72 bp CAAACTGGATATCACGGGGTAAATCCTTGTGGCATTTaGCATCGATGCTCAAGGGGAAGCCAGGGTTCCACT +
Preference number: 6 (lower is better)
Translates to: QTGYHGVNPCGI*HRCSRGSQGST
Trigger: AGTGGAACCCTGGCTTCCCCTTGAGCATCGATGCCAAATGCCACAAGGATTTACCCCGTGATATCCAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS CCA 72 bp GTGTGCTCAGATGGCCACACTGTTCGGAATCCGGTCTaGGGACAAGTAGTAATATGGCAGCTGCTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: VCSDGHTVRNPV*GQVVIWQLLLL
Trigger: AAGAAGAAGCAGCTGCCATATTACTACTTGTCCCCAGACCGGATTCCGAACAGTGTGGCCATCTGAGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS CAA 72 bp TCAAACTGGATATCACGGGGTAAATCCTTGTGGCATTaGGCATCGATGCTCAAGGGGAAGCCAGGGTTCCAC +
Preference number: 6 (lower is better)
Translates to: SNWISRGKSLWH*ASMLKGKPGFH
Trigger: GTGGAACCCTGGCTTCCCCTTGAGCATCGATGCCAAATGCCACAAGGATTTACCCCGTGATATCCAGTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS CCA 72 bp TCACTATCAAACTGGATATCACGGGGTAAATCCTTGTaGCATTTGGCATCGATGCTCAAGGGGAAGCCAGGG +
Preference number: 6 (lower is better)
Translates to: SLSNWISRGKSL*HLASMLKGKPG
Trigger: CCCTGGCTTCCCCTTGAGCATCGATGCCAAATGCCACAAGGATTTACCCCGTGATATCCAGTTTGATAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000612635.4
ENST00000622021.4
ENST00000622238.1
CDS CCA 72 bp TCACAGGTTGTGGCAGTTCGGGGTAAGATGAAGGAATaGCAGCAGCTCATTCGGCATTTGTGGTGTCTGAAA +
Preference number: 6 (lower is better)
Translates to: SQVVAVRGKMKE*QQLIRHLWCLK
Trigger: TTTCAGACACCACAAATGCCGAATGAGCTGCTGCCATTCCTTCATCTTACCCCGAACTGCCACAACCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483623.2
ENST00000622781.4
CDS CAA 72 bp CAGTTCTTTACGTCGGTGTTGCTTGAGAATGTGAATTaGGTCATCTCGGGCCAACTTTGCGCGTCCATCCCT +
Preference number: 6 (lower is better)
Translates to: QFFTSVLLENVN*VISGQLCASIP
Trigger: AGGGATGGACGCGCAAAGTTGGCCCGAGATGACCAAATTCACATTCTCAAGCAACACCGACGTAAAGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS TCA 72 bp GTTTCCAGTTCTTTACGTCGGTGTTGCTTGAGAATGTaGATTTGGTCATCTCGGGCCAACTTTGCGCGTCCA +
Preference number: 6 (lower is better)
Translates to: VSSSLRRCCLRM*IWSSRANFARP
Trigger: TGGACGCGCAAAGTTGGCCCGAGATGACCAAATTCACATTCTCAAGCAACACCGACGTAAAGAACTGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS CAA 90 bp CCATCGATATTGTTTTTGCCGTGTTTCCAGTTCTTTACGTCGGTGTaGCTTGAGAATGTGAATTTGGTCATCTCGGGCCAACTTTGCGCG +
Preference number: 6 (lower is better)
Translates to: PSILFLPCFQFFTSV*LENVNLVISGQLCA
Trigger: CGCGCAAAGTTGGCCCGAGATGACCAAATTCACATTCTCAAGCAACACCGACGTAAAGAACTGGAAACACGGCAAAAACAATATCGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS TCA 72 bp TTTGCCGTGTTTCCAGTTCTTTACGTCGGTGTTGCTTaGGAATGTGAATTTGGTCATCTCGGGCCAACTTTG +
Preference number: 6 (lower is better)
Translates to: FAVFPVLYVGVA*ECEFGHLGPTL
Trigger: CAAAGTTGGCCCGAGATGACCAAATTCACATTCTCAAGCAACACCGACGTAAAGAACTGGAAACACGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4
CDS CAA 72 bp TTGTTTTTGCCGTGTTTCCAGTTCTTTACGTCGGTGTaGCTTGAGAATGTGAATTTGGTCATCTCGGGCCAA +
Preference number: 6 (lower is better)
Translates to: LFLPCFQFFTSV*LENVNLVISGQ
Trigger: TTGGCCCGAGATGACCAAATTCACATTCTCAAGCAACACCGACGTAAAGAACTGGAAACACGGCAAAAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000374391.7
ENST00000542434.5
ENST00000610656.4
ENST00000622021.4