RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALMS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000116127

Ensembl transcript IDs: ENST00000423048.5, ENST00000484298.5, ENST00000490821.1, ENST00000613296.6, ENST00000614410.4, ENST00000620466.4, ENST00000651057.1, ENST00000651434.1, ENST00000651750.1, ENST00000652487.1, ENST00000682565.1, ENST00000682675.1, ENST00000682801.1, ENST00000682859.1, ENST00000682889.1, ENST00000683108.1, ENST00000683147.1, ENST00000683791.1, ENST00000684148.1, ENST00000684197.1, ENST00000684460.1, ENST00000684548.1, ENST00000684590.1, ENST00000684656.1

Found 1494 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCAGGGAGCCCAGGGGGCAGGATCTGAAAGCTCTGAACCGTGCTTaGGGGCAGGGCCTGCTCTTGGATCCAGCCTCCCAGGAAGCCTTC +
Preference number: 1 (lower is better)
Translates to: GREPRGQDLKALNRA*GQGLLLDPASQEAF
Trigger: GAAGGCTTCCTGGGAGGCTGGATCCAAGAGCAGGCCCTGCCCTCAAGCACGGTTCAGAGCTTTCAGATCCTGCCCCCTGGGCTCCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR CCA 90 bp GGCAGGGCCTGCTCTTGGATCCAGCCTCCCAGGAAGCCTTCTCGGTaGATGACTGGCCCTTGCCAATCTTTGTACTGGGGTTTGCTGAAC +
Preference number: 1 (lower is better)
Translates to: GRACSWIQPPRKPSR*MTGPCQSLYWGLLN
Trigger: GTTCAGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTCCTGGGAGGCTGGATCCAAGAGCAGGCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR CCA 90 bp CTGCTCTTGGATCCAGCCTCCCAGGAAGCCTTCTCGGTGGATGACTaGCCCTTGCCAATCTTTGTACTGGGGTTTGCTGAACTTAGAGTG +
Preference number: 1 (lower is better)
Translates to: LLLDPASQEAFSVDD*PLPIFVLGFAELRV
Trigger: CACTCTAAGTTCAGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTCCTGGGAGGCTGGATCCAAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR TCA 90 bp ATGTTAACAGTGGCTGAGAGGTCATCATCTCTTGTGCCTAGCACCTaGGCTGGGAAGTCTGGAGCAATGGCATCATTGGATCCTGAATGG +
Preference number: 1 (lower is better)
Translates to: MLTVAERSSSLVPST*AGKSGAMASLDPEW
Trigger: CCATTCAGGATCCAATGATGCCATTGCTCCAGACTTCCCAGCTCAGGTGCTAGGCACAAGAGATGATGACCTCTCAGCCACTGTTAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR TCA 90 bp ATGGCTTTAGTGTCTGGCAAGTTCTTCATTTCTGGGTCTCCTACTTaGGCTGAGTGCTCTGCAGCAGCAGCAGCACTGGAATCTGCAGTA +
Preference number: 1 (lower is better)
Translates to: MALVSGKFFISGSPT*AECSAAAAALESAV
Trigger: TACTGCAGATTCCAGTGCTGCTGCTGCTGCAGAGCACTCAGCTCAAGTAGGAGACCCAGAAATGAAGAACTTGCCAGACACTAAAGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 90 bp GAGCTGCCTTCATTTCCAAAGTTAGCCAGGGGGTATTCTCTGCCTTaGAAATCAAATGGAGACTACATGCAGACTGGAGGCCCCAGTCAT +
Preference number: 1 (lower is better)
Translates to: ELPSFPKLARGYSLP*KSNGDYMQTGGPSH
Trigger: ATGACTGGGGCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCCCTGGCTAACTTTGGAAATGAAGGCAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR GCA 90 bp TGTGCTCAGAAGTCACTAGGGGATGACCTGTATTCAGCACTTTCTTaGTGTGTTTGCTCCGCTTCTCAAGGTATCTCCTCTGTTGGTTGG +
Preference number: 1 (lower is better)
Translates to: CAQKSLGDDLYSALS*CVCSASQGISSVGW
Trigger: CCAACCAACAGAGGAGATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATACAGGTCATCCCCTAGTGACTTCTGAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR TCA 90 bp CCTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTaGTTCGACAGTAGAAGTGGTGCCGGAAAGGATGTTGGTGGTAGT +
Preference number: 1 (lower is better)
Translates to: PFVQSHLSICLGQYI*FDSRSGAGKDVGGS
Trigger: ACTACCACCAACATCCTTTCCGGCACCACTTCTACTGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR TCA 90 bp AGTGCTTCATTACCTTGCCCAGCAAGAAAGGGAAGAACTATGAGTTaGCCTCATGCACCATGGGTTCTTTTCCCAGTGTCCTCTTCATGG +
Preference number: 1 (lower is better)
Translates to: SASLPCPARKGRTMS*PHAPWVLFPVSSSW
Trigger: CCATGAAGAGGACACTGGGAAAAGAACCCATGGTGCATGAGGTCAACTCATAGTTCTTCCCTTTCTTGCTGGGCAAGGTAATGAAGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR GCA 90 bp ATCAGCCGGGCAGTGTCAATAGTGGAAACAGAGCTACTCCTTTCGTaGAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCG +
Preference number: 1 (lower is better)
Translates to: ISRAVSIVETELLLS*RATSLSVWVNISDS
Trigger: CGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAGGAGTAGCTCTGTTTCCACTATTGACACTGCCCGGCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 90 bp GAAACAGAGCTACTCCTTTCGTGCAGAGCCACCTCTCTATCTGTTTaGGTCAATATATCTGATTCGACAGTAGAAGTGGTGCCGGAAAGG +
Preference number: 1 (lower is better)
Translates to: ETELLLSCRATSLSV*VNISDSTVEVVPER
Trigger: CCTTTCCGGCACCACTTCTACTGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAGGAGTAGCTCTGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR TCA 90 bp CCAAAAGTGCTTCATTACCTTGCCCAGCAAGAAAGGGAAGAACTATaGGTTGACCTCATGCACCATGGGTTCTTTTCCCAGTGTCCTCTT +
Preference number: 1 (lower is better)
Translates to: PKVLHYLAQQEREEL*VDLMHHGFFSQCPL
Trigger: AAGAGGACACTGGGAAAAGAACCCATGGTGCATGAGGTCAACTCATAGTTCTTCCCTTTCTTGCTGGGCAAGGTAATGAAGCACTTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR CCA 90 bp AATAATAAAGGCTGGCCATCTGTGCCGCGAGAAAAAGTAACCTGTTaGACTGAAGATGATGAGGCAAACTTGACAGGAGCTTTGCGTAGC +
Preference number: 1 (lower is better)
Translates to: NNKGWPSVPREKVTC*TEDDEANLTGALRS
Trigger: GCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCATCTTCAGTCCAACAGGTTACTTTTTCTCGCGGCACAGATGGCCAGCCTTTATTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR TCA 90 bp TTAATTCGTCTGGGTGACAAGCATACTCTTTCATGGCCAAAAGCTTaGATCAGCCGGGCAGTGTCAATAGTGGAAACAGAGCTACTCCTT +
Preference number: 1 (lower is better)
Translates to: LIRLGDKHTLSWPKA*ISRAVSIVETELLL
Trigger: AAGGAGTAGCTCTGTTTCCACTATTGACACTGCCCGGCTGATTCAAGCTTTTGGCCATGAAAGAGTATGCTTGTCACCCAGACGAATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 90 bp TCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTGTCTTCTTCCTATaGATCTCCTCTTTCTGTGTAATGGCTTTAGTGTCTGGCAAGTTC +
Preference number: 1 (lower is better)
Translates to: SLLFGQASSGTVFFL*ISSFCVMALVSGKF
Trigger: GAACTTGCCAGACACTAAAGCCATTACACAGAAAGAGGAGATCCATAGGAAGAAGACAGTTCCCGAGGAAGCCTGGCCAAACAATAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 90 bp GTTCCACAGTTCATTCAAACTCACAGTGTGCTGAGTTGTTTGCTCTaGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTTGTCCATT +
Preference number: 1 (lower is better)
Translates to: VPQFIQTHSVLSCLL*GDLLIPLWITNLSI
Trigger: AATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCAGAGCAAACAACTCAGCACACTGTGAGTTTGAATGAACTGTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 90 bp ACTGAAGATGATGAGGCAAACTTGACAGGAGCTTTGCGTAGCTTCTaGTTACCAGGCTCTATAATTTCATGTCCACGATCTTCAGCATTA +
Preference number: 1 (lower is better)
Translates to: TEDDEANLTGALRSF*LPGSIISCPRSSAL
Trigger: TAATGCTGAAGATCGTGGACATGAAATTATAGAGCCTGGTAACCAGAAGCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCATCTTCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 90 bp ACTTTCTTGCTGTGTTTGCTCCGCTTCTCAAGGTATCTCCTCTGTTaGTTGGTGATGCTGCTATATAATTTAATTCGTCTGGGTGACAAG +
Preference number: 1 (lower is better)
Translates to: TFLLCLLRFSRYLLC*LVMLLYNLIRLGDK
Trigger: CTTGTCACCCAGACGAATTAAATTATATAGCAGCATCACCAACCAACAGAGGAGATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR GCA 90 bp ATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGATaGCTTAGTCACTACCCTCTTACTGTAGATTCCTTCTTTATGTTT +
Preference number: 1 (lower is better)
Translates to: ICIFILQGFFSHWQG*LSHYPLTVDSFFMF
Trigger: AAACATAAAGAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 90 bp CATCATTGGATCCTGAATGGGAGCTTTCAACGGTGGTATCTGATTTaGAATCCGGAGATGGAGGAATTTGTCTTAATTGTGGAACATAAT +
Preference number: 1 (lower is better)
Translates to: HHWILNGSFQRWYLI*NPEMEEFVLIVEHN
Trigger: ATTATGTTCCACAATTAAGACAAATTCCTCCATCTCCGGATTCCAAATCAGATACCACCGTTGAAAGCTCCCATTCAGGATCCAATGATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 90 bp AGTGTGCTGAGTTGTTTGCTCTGGGGTGACCTTCTGATCCCTTTGTaGATCACTAATTTGTCCATTATGTTTTGGATAATCTCTAACTTG +
Preference number: 1 (lower is better)
Translates to: SVLSCLLWGDLLIPL*ITNLSIMFWIISNL
Trigger: CAAGTTAGAGATTATCCAAAACATAATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCAGAGCAAACAACTCAGCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 90 bp GTTTTGATAAGGAAGAGGAAGACACATGTGTTCTCTATGTTTGTCTaGATGATGCTGAAAGAAATCTTTCCAAGAATGTCTCATGAAAAC +
Preference number: 1 (lower is better)
Translates to: VLIRKRKTHVFSMFV*MMLKEIFPRMSHEN
Trigger: GTTTTCATGAGACATTCTTGGAAAGATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTTCCTTATCAAAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CAA 90 bp TGGCAGGGAGCCCAGGGGGCAGGATCTGAAAGCTCTGAACCGTGCTaGAGGGCAGGGCCTGCTCTTGGATCCAGCCTCCCAGGAAGCCTT +
Preference number: 2 (lower is better)
Translates to: WQGAQGAGSESSEPC*RAGPALGSSLPGSL
Trigger: AAGGCTTCCTGGGAGGCTGGATCCAAGAGCAGGCCCTGCCCTCAAGCACGGTTCAGAGCTTTCAGATCCTGCCCCCTGGGCTCCCTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR CAA 90 bp TTGGATCCAGCCTCCCAGGAAGCCTTCTCGGTGGATGACTGGCCCTaGCCAATCTTTGTACTGGGGTTTGCTGAACTTAGAGTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: LDPASQEAFSVDDWP*PIFVLGFAELRVRL
Trigger: CAGCCTCACTCTAAGTTCAGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTCCTGGGAGGCTGGATCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR-3UTR TCA 90 bp AGGGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCCAGCTCACTCTCCTCTaGGGGCCGACAATCCGAAGA +
Preference number: 2 (lower is better)
Translates to: RGYSLPWKSNGDYMQTGGQLTLL*GPTIRR
Trigger: TCTTCGGATTGTCGGCCCTCAGAGGAGAGTGAGCTG...GCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR TCA 90 bp GGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCCCTCATGGCCAAAAGCTTaGATCAGCCGGGCAGTGTCA +
Preference number: 2 (lower is better)
Translates to: GVFSALEIKWRLHADWRPSWPKA*ISRAVS
Trigger: TGACACTGCCCGGCTGATTCAAGCTTTTGGCCATGA...GGGCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR GCA 90 bp AGGGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCTCAGGCTGTCTCTGTTaGCTCTGTCGCTCCCGATAC +
Preference number: 2 (lower is better)
Translates to: RGYSLPWKSNGDYMQTGGSGCLC*LCRSRY
Trigger: GTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGA...GCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR CAA 90 bp GGAGCTGCCTTCATTTCCAAAGTTAGCCAGGGGGTATTCTCTGCCTaGGAAATCAAATGGAGACTACATGCAGACTGGAGGCCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: GAAFISKVSQGVFSA*EIKWRLHADWRPQS
Trigger: TGACTGGGGCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCCCTGGCTAACTTTGGAAATGAAGGCAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR GCA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCATCCCACTGGCAAGGATaGCTTAGTCACTACCCTCTT +
Preference number: 2 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSSHWQG*LSHYPL
Trigger: AAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGA...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCAGGCAATAATAAAGGCTaGCCATCTGTGCCGCGAGAA +
Preference number: 2 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSGNNKG*PSVPRE
Trigger: TTCTCGCGGCACAGATGGCCAGCCTTTATTATTGCC...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp TCCTCTAGCCCCCGGAAAGCCCTGTTCTACATTCTGTCTCTACGAACTTGCCTATCTTTTTCTTTAGCCTaGGCAGCCTCAGTCACTGCC +
Preference number: 2 (lower is better)
Translates to: SSSPRKALFYILSLRTCLSFSLA*AASVTA
Trigger: GGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGA...TAGGCAAGTTCGTAGAGACAGAATGTAGAACAGGGCTTTCCGGGGGCTAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR CCA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCAAGCCTCGCTGGAACTTaGAGTTGGGAAAGTTATCCC +
Preference number: 2 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSSLAGT*SWESYP
Trigger: GGGATAACTTTCCCAACTCCAAGTTCCAGCGAGGCT...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR CCA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGGTTCTGCTCCCGCAGTaGCTCCCTCCAGGGTCTGGT +
Preference number: 2 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSVLLPQ*LPPGSG
Trigger: ACCAGACCCTGGAGGGAGCCACTGCGGGAGCAGAAC...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR TCA 90 bp TCCTCTAGCCCCCGGAAAGCCCTGTTCTACATTCTGTCTCTACGAACTTGCCTATTCAACGGTGGTATCTaGTTTGGAATCCGGAGATGG +
Preference number: 2 (lower is better)
Translates to: SSSPRKALFYILSLRTCLFNGGI*FGIRRW
Trigger: CCATCTCCGGATTCCAAATCAGATACCACCGTTGAA...TAGGCAAGTTCGTAGAGACAGAATGTAGAACAGGGCTTTCCGGGGGCTAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR TCA 90 bp AGGGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCAAACTCACAGTGTGCTaGGTTGTTTGCTCTGGGGTG +
Preference number: 2 (lower is better)
Translates to: RGYSLPWKSNGDYMQTGGKLTVC*VVCSGV
Trigger: CACCCCAGAGCAAACAACTCAGCACACTGTGAGTTT...GCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR TCA 90 bp AAAGAGGGGCTTAGAGGTATTAACCCTCTCATTTTACAGGTAAATTGGCCAAAAGCTCTGAACCGTGCTTaGGGGCAGGGCCTGCTCTTG +
Preference number: 2 (lower is better)
Translates to: KEGLRGINPLILQVNWPKALNRA*GQGLLL
Trigger: CAAGAGCAGGCCCTGCCCTCAAGCACGGTTCAGAGC...TTTTGGCCAATTTACCTGTAAAATGAGAGGGTTAATACCTCTAAGCCCCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR-3UTR CCA 90 bp TCCTCTAGCCCCCGGAAAGCCCTGTTCTACATTCTGTCTCTACGAACTTGCCTAGGAAGTCTGGAGCAATaGCATCATTGGATCCTGAAT +
Preference number: 2 (lower is better)
Translates to: SSSPRKALFYILSLRTCLGSLEQ*HHWILN
Trigger: ATTCAGGATCCAATGATGCCATTGCTCCAGACTTCC...TAGGCAAGTTCGTAGAGACAGAATGTAGAACAGGGCTTTCCGGGGGCTAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR CCA 90 bp TTCTCCCACTGGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTCCTGAGCTGGGAAGTCTaGAGCAATGGCATCATTGGA +
Preference number: 2 (lower is better)
Translates to: FSHWQGCLSHYPLTVDSFLSWEV*SNGIIG
Trigger: TCCAATGATGCCATTGCTCCAGACTTCCCAGCTCAG...GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAAGGGTTTTTCTCCCACTaGCAAGGATGCCTTAGTCAC +
Preference number: 2 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQGFFSH*QGCLSH
Trigger: GTGACTAAGGCATCCTTGCCAGTGGGAGAAAAACCC...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR TCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTCTTGTGCCTAGCACCTaGGCTGGGAAGTCTGGAGCA +
Preference number: 2 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSLVPST*AGKSGA
Trigger: TGCTCCAGACTTCCCAGCTCAGGTGCTAGGCACAAG...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR CCA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGGGGAGCTTTCAACGGTaGTATCTGATTTGGAATCCG +
Preference number: 2 (lower is better)
Translates to: ELRHLHFHSARVFLPLARGSFQR*YLIWNP
Trigger: CGGATTCCAAATCAGATACCACCGTTGAAAGCTCCC...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp GTTGTCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGCAGCAGCAGCAGCACTaGAATCTGCAGTATCTTTCT +
Preference number: 2 (lower is better)
Translates to: VVYHSIPSHFVPLCYHHVQQQQH*NLQYLS
Trigger: AGAAAGATACTGCAGATTCCAGTGCTGCTGCTGCTG...CACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp TCCTCTAGCCCCCGGAAAGCCCTGTTCTACATTCTGTCTCTACGAACTTGCCTAAGGTATCTCCTCTGTTaGTTGGTGATGCTGCTATAT +
Preference number: 2 (lower is better)
Translates to: SSSPRKALFYILSLRTCLRYLLC*LVMLLY
Trigger: ATATAGCAGCATCACCAACCAACAGAGGAGATACCT...TAGGCAAGTTCGTAGAGACAGAATGTAGAACAGGGCTTTCCGGGGGCTAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR CAA 90 bp AAGTGCTTCATTACCTTGCCCAGCAAGAAAGGGAAGAACTATGAGTaGACCTCATGCACCATGGGTTCTTTTCCCAGTGTCCTCTTCATG +
Preference number: 2 (lower is better)
Translates to: KCFITLPSKKGKNYE*TSCTMGSFPSVLFM
Trigger: CATGAAGAGGACACTGGGAAAAGAACCCATGGTGCATGAGGTCAACTCATAGTTCTTCCCTTTCTTGCTGGGCAAGGTAATGAAGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR CAA 90 bp TCATCATTTCAAACAGAAACTCTGTACCCACTAGGCAAGAACTCCTaGTCTTCTCCTCTAGCCCCCGGAAAGCCCTGTTCTACATTCTGT +
Preference number: 2 (lower is better)
Translates to: SSFQTETLYPLGKNS*SSPLAPGKPCSTFC
Trigger: ACAGAATGTAGAACAGGGCTTTCCGGGGGCTAGAGGAGAAGACAAGGAGTTCTTGCCTAGTGGGTACAGAGTTTCTGTTTGAAATGATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR TCA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTCTTGTGCCTAGCACCTaGGCTGGGAAGTCTGGAGCA +
Preference number: 2 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTLVPST*AGKSGA
Trigger: TGCTCCAGACTTCCCAGCTCAGGTGCTAGGCACAAG...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR GCA 90 bp CACTCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGGTCATCATCTCTTGTaGCTAGCACCTGAGCTGGGA +
Preference number: 2 (lower is better)
Translates to: HSFPKIHGKYLDHLVGVRGHHLL*LAPELG
Trigger: TCCCAGCTCAGGTGCTAGGCACAAGAGATGATGACC...CCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR GCA 90 bp AAAGAGGGGCTTAGAGGTATTAACCCTCTCATTTTACAGGTAAATTGGCCAAAAGAAAGCTCTGAACCGTaGTTGAGGGCAGGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: KEGLRGINPLILQVNWPKESSEP*LRAGPA
Trigger: AGCAGGCCCTGCCCTCAAGCACGGTTCAGAGCTTTC...TTTTGGCCAATTTACCTGTAAAATGAGAGGGTTAATACCTCTAAGCCCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR-3UTR GCA 90 bp TGGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTTGTCCATTATGTTTTGGGCTCGGTCTGTAACATaGTCTGCAGCTTCCTCTCCT +
Preference number: 2 (lower is better)
Translates to: WGDLLIPLWITNLSIMFWARSVT*SAASSP
Trigger: AGGAGAGGAAGCTGCAGAGCATGTTACAGACCGAGC...CCAAAACATAATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR CCA 90 bp CTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCGACACTGAGTTGTTTGCTCTaGGGTGACCTTCTGATCCCT +
Preference number: 2 (lower is better)
Translates to: LSCRATSLSVWVNISDSTLSCLL*GDLLIP
Trigger: AGGGATCAGAAGGTCACCCCAGAGCAAACAACTCAG...TGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCACTTTTTCTGTACTTCTaGAAGCTGCTCATAAATCCG +
Preference number: 2 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSLFLYF*KLLINP
Trigger: CGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAG...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR CAA 90 bp GTAACCTGTTGGACTGAAGATGATGAGGCAAACTTGACAGGAGCTTaGCGTAGCTTCTGGTTACCAGGCTCTATAATTTCATGTCCACGA +
Preference number: 2 (lower is better)
Translates to: VTCWTEDDEANLTGA*RSFWLPGSIISCPR
Trigger: TCGTGGACATGAAATTATAGAGCCTGGTAACCAGAAGCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCATCTTCAGTCCAACAGGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CAA 90 bp CCGCGAGAAAAAGTAACCTGTTGGACTGAAGATGATGAGGCAAACTaGACAGGAGCTTTGCGTAGCTTCTGGTTACCAGGCTCTATAATT +
Preference number: 2 (lower is better)
Translates to: PREKVTCWTEDDEAN*TGALRSFWLPGSII
Trigger: AATTATAGAGCCTGGTAACCAGAAGCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCATCTTCAGTCCAACAGGTTACTTTTTCTCGCGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR TCA 90 bp GTTGTCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGAATGTTAACAGTGGCTaGGAGGTCATCATCTCTTGT +
Preference number: 2 (lower is better)
Translates to: VVYHSIPSHFVPLCYHHVNVNSG*EVIISC
Trigger: ACAAGAGATGATGACCTCTCAGCCACTGTTAACATT...CACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR TCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGTCTGGGTCTCCTACTTaGGCTGAGTGCTCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: TTLSHSFPVGKKWYREERSGSPT*AECSAA
Trigger: TGCTGCAGAGCACTCAGCTCAAGTAGGAGACCCAGA...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
3UTR-3UTR TCA 90 bp GTTGTCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTCATGGCAAATATCTTaGTCACTTGGTAGGTGTACG +
Preference number: 2 (lower is better)
Translates to: VVYHSIPSHFVPLCYHHVSWQIS*SLGRCT
Trigger: CGTACACCTACCAAGTGATCAAGATATTTGCCATGA...CACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR GCA 90 bp TGGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTTGTCCATTATGTTTTGGTCCCACTGGCAAGGATaGCTTAGTCACTACCCTCTT +
Preference number: 2 (lower is better)
Translates to: WGDLLIPLWITNLSIMFWSHWQG*LSHYPL
Trigger: AAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGA...CCAAAACATAATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTGAGCAATGGCATCATTaGATCCTGAATGGGAGCTTT +
Preference number: 2 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTEQWHH*ILNGSF
Trigger: AAAGCTCCCATTCAGGATCCAATGATGCCATTGCTC...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp CTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCGACAGGATTCTTTATTGTTTaGCCAGGCTTCCTCGGGAAC +
Preference number: 2 (lower is better)
Translates to: LSCRATSLSVWVNISDSTGFFIV*PGFLGN
Trigger: GTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCC...TGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTGCTGGAACTTGGAGTTaGGAAAGTTATCCCAACATC +
Preference number: 2 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTAGTWS*ESYPNI
Trigger: GATGTTGGGATAACTTTCCCAACTCCAAGTTCCAGC...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR CCA 90 bp CTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCGACACTCTTTTTATATAGCTaGGCTCGCAGCCGGTATGAC +
Preference number: 2 (lower is better)
Translates to: LSCRATSLSVWVNISDSTLFLYS*ARSRYD
Trigger: GTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG...TGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR TCA 90 bp TGGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTTGTCCATTATGTTTTGGATGATGAGGCAAACTTaGCAGGAGCTTTGCGTAGCT +
Preference number: 2 (lower is better)
Translates to: WGDLLIPLWITNLSIMFWMMRQT*QELCVA
Trigger: AGCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCAT...CCAAAACATAATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR TCA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTATGATGAGGCAAACTTaGCAGGAGCTTTGCGTAGCT +
Preference number: 2 (lower is better)
Translates to: SILICRDSLLFGQASSGTMMRQT*QELCVA
Trigger: AGCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCAT...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTGCTTTGCGTAGCTTCTaGTTACCAGGCTCTATAATT +
Preference number: 2 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTALRSF*LPGSII
Trigger: AATTATAGAGCCTGGTAACCAGAAGCTACGCAAAGC...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTCGGTGGTATCTGATTTaGAATCCGGAGATGGAGGAA +
Preference number: 2 (lower is better)
Translates to: SILICRDSLLFGQASSGTRWYLI*NPEMEE
Trigger: TTCCTCCATCTCCGGATTCCAAATCAGATACCACCG...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp CACTCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGGGAGCTTTCAACGGTaGTATCTGATTTGGAATCCG +
Preference number: 2 (lower is better)
Translates to: HSFPKIHGKYLDHLVGVRGSFQR*YLIWNP
Trigger: CGGATTCCAAATCAGATACCACCGTTGAAAGCTCCC...CCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTAGCCTCGCTGGAACTTaGAGTTGGGAAAGTTATCCC +
Preference number: 2 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSSLAGT*SWESYP
Trigger: GGGATAACTTTCCCAACTCCAAGTTCCAGCGAGGCT...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
3UTR CAA 90 bp ATACTTGTTCCACAGTTCATTCAAACTCACAGTGTGCTGAGTTGTTaGCTCTGGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTTG +
Preference number: 2 (lower is better)
Translates to: ILVPQFIQTHSVLSC*LWGDLLIPLWITNL
Trigger: CAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCAGAGCAAACAACTCAGCACACTGTGAGTTTGAATGAACTGTGGAACAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CAA 90 bp TTCTTGCTGTGTTTGCTCCGCTTCTCAAGGTATCTCCTCTGTTGGTaGGTGATGCTGCTATATAATTTAATTCGTCTGGGTGACAAGCAT +
Preference number: 2 (lower is better)
Translates to: FLLCLLRFSRYLLCW*VMLLYNLIRLGDKH
Trigger: ATGCTTGTCACCCAGACGAATTAAATTATATAGCAGCATCACCAACCAACAGAGGAGATACCTTGAGAAGCGGAGCAAACACAGCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR GCA 90 bp AGTTTTTCATCATTTCAAACAGAAACTCTGTACCCACTAGGCAAGAACTCCTTGGAGCTACTCCTTTCGTaGAGAGCCACCTCTCTATCT +
Preference number: 2 (lower is better)
Translates to: SFSSFQTETLYPLGKNSLELLLS*RATSLS
Trigger: AGATAGAGAGGTGGCTCTGCACGAAAGGAGTAGCTC...CAAGGAGTTCTTGCCTAGTGGGTACAGAGTTTCTGTTTGAAATGATGAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR CCA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTGGGTTTTTCTCCCACTaGCAAGGATGCCTTAGTCAC +
Preference number: 2 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTGFFSH*QGCLSH
Trigger: GTGACTAAGGCATCCTTGCCAGTGGGAGAAAAACCC...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTTCTTTTTCTTTAGCCTaGGCAGCCTCAGTCACTGCC +
Preference number: 2 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTSFSLA*AASVTA
Trigger: GGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGA...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp GTTGTCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGCTTCTGATCCCTTTGTaGATCACTAATTTGTCCATT +
Preference number: 2 (lower is better)
Translates to: VVYHSIPSHFVPLCYHHVLLIPL*ITNLSI
Trigger: AATGGACAAATTAGTGATCCACAAAGGGATCAGAAG...CACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTGCTCCCTCCAGGGTCTaGTCTTGGTTATTGGTTCAA +
Preference number: 2 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTAPSRV*SWLLVQ
Trigger: TTGAACCAATAACCAAGACCAGACCCTGGAGGGAGC...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR CCA 90 bp TGGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTTGTCCATTATGTTTTGGGCTTTGCGTAGCTTCTaGTTACCAGGCTCTATAATT +
Preference number: 2 (lower is better)
Translates to: WGDLLIPLWITNLSIMFWALRSF*LPGSII
Trigger: AATTATAGAGCCTGGTAACCAGAAGCTACGCAAAGC...CCAAAACATAATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp CACATTGATGCTGAGGCTCTTTATTCTGGTATAATCTGTCTTAGTCTTGTCCATTCCAGGGTCTGGTCTTaGTTATTGGTTCAAACCAGG +
Preference number: 2 (lower is better)
Translates to: HIDAEALYSGIICLSLVHSRVWS*LLVQTR
Trigger: CCTGGTTTGAACCAATAACCAAGACCAGACCCTGGA...ATGGACAAGACTAAGACAGATTATACCAGAATAAAGAGCCTCAGCATCAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR TCA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGCTGTTGTTATCTGAGTaGCTGCATCAGATGACAATT +
Preference number: 2 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSLLLSE*LHQMTI
Trigger: AATTGTCATCTGATGCAGTCACTCAGATAACAACAG...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR TCA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCCCAGTGATTAGCACTTaGACTGAGGCATCTGCATTT +
Preference number: 2 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEIPVIST*TEASAF
Trigger: AAATGCAGATGCCTCAGTTCAAGTGCTAATCACTGG...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR TCA 90 bp GGTATTAACCCTCTCATTTTACAGGTAAATTGGCCAAAAGTGCTTCATTACCTTGGAAGAACTATGAGTTaGCCTCATGCACCATGGGTT +
Preference number: 2 (lower is better)
Translates to: GINPLILQVNWPKVLHYLGRTMS*PHAPWV
Trigger: AACCCATGGTGCATGAGGTCAACTCATAGTTCTTCC...AAGGTAATGAAGCACTTTTGGCCAATTTACCTGTAAAATGAGAGGGTTAATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR-3UTR GCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGAGCAGCACTGGAATCTaGAGTATCTTTCTGCAAAGA +
Preference number: 2 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGSSTGI*SIFLQR
Trigger: TCTTTGCAGAAAGATACTGCAGATTCCAGTGCTGCT...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
3UTR-3UTR GCA 90 bp CATTGTTTTAGAGTTTATGTAAAGAGGGGCTTAGAGGTATTAACCCTCTCATTTTGGATGACTGGCCCTTaGCAATCTTTGTACTGGGGT +
Preference number: 2 (lower is better)
Translates to: HCFRVYVKRGLEVLTLSFWMTGP*QSLYWG
Trigger: ACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCA...AAATGAGAGGGTTAATACCTCTAAGCCCCTCTTTACATAAACTCTAAAACAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR-3UTR CCA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTGAAAAAGTAACCTGTTaGACTGAAGATGATGAGGCA +
Preference number: 2 (lower is better)
Translates to: SILICRDSLLFGQASSGTEKVTC*TEDDEA
Trigger: TGCCTCATCATCTTCAGTCCAACAGGTTACTTTTTC...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAACGGTGGTATCTGATTTaGAATCCGGAGATGGAGGAA +
Preference number: 2 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKRWYLI*NPEMEE
Trigger: TTCCTCCATCTCCGGATTCCAAATCAGATACCACCG...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp CACATTGATGCTGAGGCTCTTTATTCTGGTATAATCTGTCTTAGTCTTGTCCATTCATTGGATCCTGAATaGGAGCTTTCAACGGTGGTA +
Preference number: 2 (lower is better)
Translates to: HIDAEALYSGIICLSLVHSLDPE*ELSTVV
Trigger: TACCACCGTTGAAAGCTCCCATTCAGGATCCAATGA...ATGGACAAGACTAAGACAGATTATACCAGAATAAAGAGCCTCAGCATCAATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAACAGCAGCAGCAGCACTaGAATCTGCAGTATCTTTCT +
Preference number: 2 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKQQQQH*NLQYLS
Trigger: AGAAAGATACTGCAGATTCCAGTGCTGCTGCTGCTG...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTGCTGGAACTTGGAGTTaGGAAAGTTATCCCAACATC +
Preference number: 2 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSAGTWS*ESYPNI
Trigger: GATGTTGGGATAACTTTCCCAACTCCAAGTTCCAGC...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
3UTR-3UTR TCA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTAATGTTAACAGTGGCTaGGAGGTCATCATCTCTTGT +
Preference number: 2 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTNVNSG*EVIISC
Trigger: ACAAGAGATGATGACCTCTCAGCCACTGTTAACATT...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR TCA 90 bp TCACATTGTTTTAGAGTTTATGTAAAGAGGGGCTTAGAGGTATTAACCCTCTCAGAAAGGGAAGAACTATaGGTTGACCTCATGCACCAT +
Preference number: 2 (lower is better)
Translates to: SHCFRVYVKRGLEVLTLSEREEL*VDLMHH
Trigger: ATGGTGCATGAGGTCAACTCATAGTTCTTCCCTTTC...TGAGAGGGTTAATACCTCTAAGCCCCTCTTTACATAAACTCTAAAACAATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR-3UTR GCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTTGAGCTCAGGAAACTaGAGTCAATGTCACAGTTAT +
Preference number: 2 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNLSSGN*SQCHSY
Trigger: ATAACTGTGACATTGACTGCAGTTTCCTGAGCTCAA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652487.1
3UTR-3UTR CCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTCTTTTTCTGTACTTCTaGAAGCTGCTCATAAATCCG +
Preference number: 2 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSLFLYF*KLLINP
Trigger: CGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAG...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
3UTR-3UTR GCA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAAGCAGCACTGGAATCTaGAGTATCTTTCTGCAAAGA +
Preference number: 2 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKSSTGI*SIFLQR
Trigger: TCTTTGCAGAAAGATACTGCAGATTCCAGTGCTGCT...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR GCA 90 bp CATTGTTTTAGAGTTTATGTAAAGAGGGGCTTAGAGGTATTAACCCTCTCATTTTATGAGTTGACCTCATaGACCATGGGTTCTTTTCCC +
Preference number: 2 (lower is better)
Translates to: HCFRVYVKRGLEVLTLSFYELTS*TMGSFP
Trigger: GGGAAAAGAACCCATGGTGCATGAGGTCAACTCATA...AAATGAGAGGGTTAATACCTCTAAGCCCCTCTTTACATAAACTCTAAAACAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR-3UTR CCA 90 bp AGTTTTTCATCATTTCAAACAGAAACTCTGTACCCACTAGGCAAGAACTCCTTGGAAAAAGTAACCTGTTaGACTGAAGATGATGAGGCA +
Preference number: 2 (lower is better)
Translates to: SFSSFQTETLYPLGKNSLEKVTC*TEDDEA
Trigger: TGCCTCATCATCTTCAGTCCAACAGGTTACTTTTTC...CAAGGAGTTCTTGCCTAGTGGGTACAGAGTTTCTGTTTGAAATGATGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR TCA 90 bp CACATTGATGCTGAGGCTCTTTATTCTGGTATAATCTGTCTTAGTCTTGTCCATCGGACTCTTCAATATTaGTCTGTAGGGATTCTTTAT +
Preference number: 2 (lower is better)
Translates to: HIDAEALYSGIICLSLVHRTLQY*SVGILY
Trigger: ATAAAGAATCCCTACAGATCAATATTGAAGAGTCCG...ATGGACAAGACTAAGACAGATTATACCAGAATAAAGAGCCTCAGCATCAATGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR TCA 90 bp ACCAGGCTCTATAATTTCATGTCCACGATCTTCAGCATTAATAAAAATCTCAGACTGTTGTTATCTGAGTaGCTGCATCAGATGACAATT +
Preference number: 2 (lower is better)
Translates to: TRLYNFMSTIFSINKNLRLLLSE*LHQMTI
Trigger: AATTGTCATCTGATGCAGTCACTCAGATAACAACAG...TCTGAGATTTTTATTAATGCTGAAGATCGTGGACATGAAATTATAGAGCCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR TCA 72 bp CCCAGGGGGCAGGATCTGAAAGCTCTGAACCGTGCTTaGGGGCAGGGCCTGCTCTTGGATCCAGCCTCCCAG +
Preference number: 3 (lower is better)
Translates to: PRGQDLKALNRA*GQGLLLDPASQ
Trigger: CTGGGAGGCTGGATCCAAGAGCAGGCCCTGCCCTCAAGCACGGTTCAGAGCTTTCAGATCCTGCCCCCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR GCA 72 bp GGAGCCCAGGGGGCAGGATCTGAAAGCTCTGAACCGTaGTTGAGGGCAGGGCCTGCTCTTGGATCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: GAQGAGSESSEP*LRAGPALGSSL
Trigger: GAGGCTGGATCCAAGAGCAGGCCCTGCCCTCAAGCACGGTTCAGAGCTTTCAGATCCTGCCCCCTGGGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR TCA 72 bp CTTGGATCCAGCCTCCCAGGAAGCCTTCTCGGTGGATaGCTGGCCCTTGCCAATCTTTGTACTGGGGTTTGC +
Preference number: 3 (lower is better)
Translates to: LGSSLPGSLLGG*LALANLCTGVC
Trigger: GCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTCCTGGGAGGCTGGATCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR CCA 72 bp TGCTCTTGGATCCAGCCTCCCAGGAAGCCTTCTCGGTaGATGACTGGCCCTTGCCAATCTTTGTACTGGGGT +
Preference number: 3 (lower is better)
Translates to: CSWIQPPRKPSR*MTGPCQSLYWG
Trigger: ACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTCCTGGGAGGCTGGATCCAAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR CCA 72 bp GATCCAGCCTCCCAGGAAGCCTTCTCGGTGGATGACTaGCCCTTGCCAATCTTTGTACTGGGGTTTGCTGAA +
Preference number: 3 (lower is better)
Translates to: DPASQEAFSVDD*PLPIFVLGFAE
Trigger: TTCAGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTCCTGGGAGGCTGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR GCA 72 bp CCTCCCAGGAAGCCTTCTCGGTGGATGACTGGCCCTTaGCAATCTTTGTACTGGGGTTTGCTGAACTTAGAG +
Preference number: 3 (lower is better)
Translates to: PPRKPSRWMTGP*QSLYWGLLNLE
Trigger: CTCTAAGTTCAGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTCCTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR TCA 72 bp GTGGCTGAGAGGTCATCATCTCTTGTGCCTAGCACCTaGGCTGGGAAGTCTGGAGCAATGGCATCATTGGAT +
Preference number: 3 (lower is better)
Translates to: VAERSSSLVPST*AGKSGAMASLD
Trigger: ATCCAATGATGCCATTGCTCCAGACTTCCCAGCTCAGGTGCTAGGCACAAGAGATGATGACCTCTCAGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR TCA 72 bp GTGTCTGGCAAGTTCTTCATTTCTGGGTCTCCTACTTaGGCTGAGTGCTCTGCAGCAGCAGCAGCACTGGAA +
Preference number: 3 (lower is better)
Translates to: VSGKFFISGSPT*AECSAAAAALE
Trigger: TTCCAGTGCTGCTGCTGCTGCAGAGCACTCAGCTCAAGTAGGAGACCCAGAAATGAAGAACTTGCCAGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 72 bp TTGTGCCTAGCACCTGAGCTGGGAAGTCTGGAGCAATaGCATCATTGGATCCTGAATGGGAGCTTTCAACGG +
Preference number: 3 (lower is better)
Translates to: LCLAPELGSLEQ*HHWILNGSFQR
Trigger: CCGTTGAAAGCTCCCATTCAGGATCCAATGATGCCATTGCTCCAGACTTCCCAGCTCAGGTGCTAGGCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 72 bp GGCTGGCCATCTGTGCCGCGAGAAAAAGTAACCTGTTaGACTGAAGATGATGAGGCAAACTTGACAGGAGCT +
Preference number: 3 (lower is better)
Translates to: GWPSVPREKVTC*TEDDEANLTGA
Trigger: AGCTCCTGTCAAGTTTGCCTCATCATCTTCAGTCCAACAGGTTACTTTTTCTCGCGGCACAGATGGCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGAGAGGTCATCATCTCTaGTGCCTAGCACCTGAGCTG +
Preference number: 3 (lower is better)
Translates to: ELRHLHFHSARVFLPLARRGHHL*CLAPEL
Trigger: CAGCTCAGGTGCTAGGCACAAGAGATGATGACCTCT...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGCCAGGAAGACTCTCTaGGGCAGCGGGCACATGCGA +
Preference number: 3 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSARKTL*GSGHMR
Trigger: TCGCATGTGCCCGCTGCCCAAGAGAGTCTTCCTGGC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
3UTR GCA 72 bp GGGGATGACCTGTATTCAGCACTTTCTTGCTGTGTTTaGTCCGCTTCTCAAGGTATCTCCTCTGTTGGTTGG +
Preference number: 3 (lower is better)
Translates to: GDDLYSALSCCV*SASQGISSVGW
Trigger: CCAACCAACAGAGGAGATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATACAGGTCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGGATGATGAGGCAAACTaGACAGGAGCTTTGCGTAGC +
Preference number: 3 (lower is better)
Translates to: ELRHLHFHSARVFLPLARDDEAN*TGALRS
Trigger: GCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCATC...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp GTTGTCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGGATGATGAGGCAAACTaGACAGGAGCTTTGCGTAGC +
Preference number: 3 (lower is better)
Translates to: VVYHSIPSHFVPLCYHHVDDEAN*TGALRS
Trigger: GCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCATC...CACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTAGAGGTCATCATCTCTaGTGCCTAGCACCTGAGCTG +
Preference number: 3 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTRGHHL*CLAPEL
Trigger: CAGCTCAGGTGCTAGGCACAAGAGATGATGACCTCT...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR TCA 72 bp CTGGGTGACAAGCATACTCTTTCATGGCCAAAAGCTTaGATCAGCCGGGCAGTGTCAATAGTGGAAACAGAG +
Preference number: 3 (lower is better)
Translates to: LGDKHTLSWPKA*ISRAVSIVETE
Trigger: CTCTGTTTCCACTATTGACACTGCCCGGCTGATTCAAGCTTTTGGCCATGAAAGAGTATGCTTGTCACCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR TCA 72 bp TTACCTTGCCCAGCAAGAAAGGGAAGAACTATGAGTTaGCCTCATGCACCATGGGTTCTTTTCCCAGTGTCC +
Preference number: 3 (lower is better)
Translates to: LPCPARKGRTMS*PHAPWVLFPVS
Trigger: GGACACTGGGAAAAGAACCCATGGTGCATGAGGTCAACTCATAGTTCTTCCCTTTCTTGCTGGGCAAGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR-3UTR CAA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAGCCAGGAAGACTCTCTaGGGCAGCGGGCACATGCGA +
Preference number: 3 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKARKTL*GSGHMR
Trigger: TCGCATGTGCCCGCTGCCCAAGAGAGTCTTCCTGGC...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR CAA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTTGTAGGGATTCTTTATaGTTTGGCCAGGCTTCCTCG +
Preference number: 3 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTCRDSL*FGQASS
Trigger: CGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACA...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAATGTCGCTCCCGATACTaGTTCCACAGTTCATTCAAA +
Preference number: 3 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQCRSRY*FHSSFK
Trigger: TTTGAATGAACTGTGGAACAAGTATCGGGAGCGACA...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR TCA 72 bp CTTCATTACCTTGCCCAGCAAGAAAGGGAAGAACTATaGGTTGACCTCATGCACCATGGGTTCTTTTCCCAG +
Preference number: 3 (lower is better)
Translates to: LHYLAQQEREEL*VDLMHHGFFSQ
Trigger: CTGGGAAAAGAACCCATGGTGCATGAGGTCAACTCATAGTTCTTCCCTTTCTTGCTGGGCAAGGTAATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR GCA 72 bp AAGTCACTAGGGGATGACCTGTATTCAGCACTTTCTTaGTGTGTTTGCTCCGCTTCTCAAGGTATCTCCTCT +
Preference number: 3 (lower is better)
Translates to: KSLGDDLYSALS*CVCSASQGISS
Trigger: AGAGGAGATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATACAGGTCATCCCCTAGTGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGACGGTGGTATCTGATTaGGAATCCGGAGATGGAGGA +
Preference number: 3 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSTVVSD*ESGDGG
Trigger: TCCTCCATCTCCGGATTCCAAATCAGATACCACCGT...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGGGGATTCTTTATTGTTaGGCCAGGCTTCCTCGGGAA +
Preference number: 3 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSGILYC*ARLPRE
Trigger: TTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCC...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp AGGGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCAAATATCTTGATCACTaGGTAGGTGTACGGGATGAT +
Preference number: 3 (lower is better)
Translates to: RGYSLPWKSNGDYMQTGGKYLDH*VGVRDD
Trigger: ATCATCCCGTACACCTACCAAGTGATCAAGATATTT...GCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGCGATTCCTGAAGGGTaGCTCTCACAAATGGCCTCA +
Preference number: 3 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSAIPEG*LSQMAS
Trigger: TGAGGCCATTTGTGAGAGCAACCCTTCAGGAATCGC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
3UTR TCA 72 bp TTGTCTGAGAGGTTCTCATCCCCAGTGATTAGCACTTaGACTGAGGCATCTGCATTTTCATTCTGCAAGGGT +
Preference number: 3 (lower is better)
Translates to: LSERFSSPVIST*TEASAFSFCKG
Trigger: ACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTCAAGTGCTAATCACTGGGGATGAGAACCTCTCAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR TCA 72 bp CAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTaGTTCGACAGTAGAAGTGGTGCCGGAAAGGATGTT +
Preference number: 3 (lower is better)
Translates to: QSHLSICLGQYI*FDSRSGAGKDV
Trigger: AACATCCTTTCCGGCACCACTTCTACTGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR GCA 72 bp TTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGATaGCTTAGTCACTACCCTCTTACTGTAGATTCCTTC +
Preference number: 3 (lower is better)
Translates to: FILQGFFSHWQG*LSHYPLTVDSF
Trigger: GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR GCA 72 bp GCAGTGTCAATAGTGGAAACAGAGCTACTCCTTTCGTaGAGAGCCACCTCTCTATCTGTTTGGGTCAATATA +
Preference number: 3 (lower is better)
Translates to: AVSIVETELLLS*RATSLSVWVNI
Trigger: TATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAGGAGTAGCTCTGTTTCCACTATTGACACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 72 bp GATGAGGCAAACTTGACAGGAGCTTTGCGTAGCTTCTaGTTACCAGGCTCTATAATTTCATGTCCACGATCT +
Preference number: 3 (lower is better)
Translates to: DEANLTGALRSF*LPGSIISCPRS
Trigger: AGATCGTGGACATGAAATTATAGAGCCTGGTAACCAGAAGCTACGCAAAGCTCCTGTCAAGTTTGCCTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 72 bp TGGCATCATTGGATCCTGAATGGGAGCTTTCAACGGTaGTATCTGATTTGGAATCCGGAGATGGAGGAATTT +
Preference number: 3 (lower is better)
Translates to: WHHWILNGSFQR*YLIWNPEMEEF
Trigger: AAATTCCTCCATCTCCGGATTCCAAATCAGATACCACCGTTGAAAGCTCCCATTCAGGATCCAATGATGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR CCA 72 bp CTACTCCTTTCGTGCAGAGCCACCTCTCTATCTGTTTaGGTCAATATATCTGATTCGACAGTAGAAGTGGTG +
Preference number: 3 (lower is better)
Translates to: LLLSCRATSLSV*VNISDSTVEVV
Trigger: CACCACTTCTACTGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAGGAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGGGAGCAATGGCATCATaGGATCCTGAATGGGAGCTT +
Preference number: 3 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGGAMAS*DPEWEL
Trigger: AAGCTCCCATTCAGGATCCAATGATGCCATTGCTCC...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423048.5
3UTR-3UTR CAA 90 bp AAAGAGGGGCTTAGAGGTATTAACCCTCTCATTTTACAGGTAAATTGGCCAAAAGGCCCTTGCCAATCTTaGTACTGGGGTTTGCTGAAC +
Preference number: 3 (lower is better)
Translates to: KEGLRGINPLILQVNWPKGPCQS*YWGLLN
Trigger: GTTCAGCAAACCCCAGTACAAAGATTGGCAAGGGCC...TTTTGGCCAATTTACCTGTAAAATGAGAGGGTTAATACCTCTAAGCCCCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTCTCCAGGGTCTGGTCTaGGTTATTGGTTCAAACCAG +
Preference number: 3 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSLQGLV*VIGSNQ
Trigger: CTGGTTTGAACCAATAACCAAGACCAGACCCTGGAG...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
3UTR GCA 72 bp GGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATaGAGACTGGAGGCCCCAGTCATAAAAGTAAGGATT +
Preference number: 3 (lower is better)
Translates to: GILCLGNQMETT*RLEAPVIKVRI
Trigger: AATCCTTACTTTTATGACTGGGGCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR CCA 72 bp ATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTaGCAAGGATGCCTTAGTCACTACCCTCTTACTGTA +
Preference number: 3 (lower is better)
Translates to: ICIFILQGFFSH*QGCLSHYPLTV
Trigger: TACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTACGGTGGTATCTGATTaGGAATCCGGAGATGGAGGA +
Preference number: 3 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTTVVSD*ESGDGG
Trigger: TCCTCCATCTCCGGATTCCAAATCAGATACCACCGT...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTAGTCTTGTCCATGTTTaGATAAGGAAGAGGAAGACA +
Preference number: 3 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTSLVHV*IRKRKT
Trigger: TGTCTTCCTCTTCCTTATCAAAACATGGACAAGACT...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp AAAGAGGGGCTTAGAGGTATTAACCCTCTCATTTTACAGGTAAATTGGCCAAAAGGGAAGAACTATGAGTaGACCTCATGCACCATGGGT +
Preference number: 3 (lower is better)
Translates to: KEGLRGINPLILQVNWPKGKNYE*TSCTMG
Trigger: ACCCATGGTGCATGAGGTCAACTCATAGTTCTTCCC...TTTTGGCCAATTTACCTGTAAAATGAGAGGGTTAATACCTCTAAGCCCCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR-3UTR CAA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTCTCCAGGGTCTGGTCTaGGTTATTGGTTCAAACCAG +
Preference number: 3 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTLQGLV*VIGSNQ
Trigger: CTGGTTTGAACCAATAACCAAGACCAGACCCTGGAG...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR CCA 72 bp ATCCTGAATGGGAGCTTTCAACGGTGGTATCTGATTTaGAATCCGGAGATGGAGGAATTTGTCTTAATTGTG +
Preference number: 3 (lower is better)
Translates to: ILNGSFQRWYLI*NPEMEEFVLIV
Trigger: CACAATTAAGACAAATTCCTCCATCTCCGGATTCCAAATCAGATACCACCGTTGAAAGCTCCCATTCAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp AGTTTTTCATCATTTCAAACAGAAACTCTGTACCCACTAGGCAAGAACTCCTTGTGTAGGGATTCTTTATaGTTTGGCCAGGCTTCCTCG +
Preference number: 3 (lower is better)
Translates to: SFSSFQTETLYPLGKNSLCRDSL*FGQASS
Trigger: CGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACA...CAAGGAGTTCTTGCCTAGTGGGTACAGAGTTTCTGTTTGAAATGATGAAAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR-3UTR CAA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCGCTGGAACTTGGAGTaGGGAAAGTTATCCCAACAT +
Preference number: 3 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSRWNLE*GKLSQH
Trigger: ATGTTGGGATAACTTTCCCAACTCCAAGTTCCAGCG...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
3UTR GCA 72 bp ACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTaGTCCCAAACCATTAGGAATTTTAATCACCACTTT +
Preference number: 3 (lower is better)
Translates to: TGHWTRPLCRKY*SQTIRNFNHHF
Trigger: AAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
3UTR-3UTR CAA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGAGTCTTGTCCATGTTTaGATAAGGAAGAGGAAGACA +
Preference number: 3 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSSLVHV*IRKRKT
Trigger: TGTCTTCCTCTTCCTTATCAAAACATGGACAAGACT...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGAAATATCTTGATCACTaGGTAGGTGTACGGGATGAT +
Preference number: 3 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGKYLDH*VGVRDD
Trigger: ATCATCCCGTACACCTACCAAGTGATCAAGATATTT...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
3UTR-3UTR CAA 90 bp TCACATTGTTTTAGAGTTTATGTAAAGAGGGGCTTAGAGGTATTAACCCTCTCACCTTCCTCCATTACTTaGGGCCTTAGAAAAGTAAGG +
Preference number: 3 (lower is better)
Translates to: SHCFRVYVKRGLEVLTLSPSSIT*GLRKVR
Trigger: CCTTACTTTTCTAAGGCCCAAAGTAATGGAGGAAGG...TGAGAGGGTTAATACCTCTAAGCCCCTCTTTACATAAACTCTAAAACAATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR-3UTR CAA 90 bp TCACATTGTTTTAGAGTTTATGTAAAGAGGGGCTTAGAGGTATTAACCCTCTCACTTAGAGTGAGGCTGTaGAAAACCTTCCTCCATTAC +
Preference number: 3 (lower is better)
Translates to: SHCFRVYVKRGLEVLTLSLRVRL*KTFLHY
Trigger: GTAATGGAGGAAGGTTTTCAACAGCCTCACTCTAAG...TGAGAGGGTTAATACCTCTAAGCCCCTCTTTACATAAACTCTAAAACAATGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR CCA 72 bp CTTAGAGGTATTAACCCTCTCATTTTACAGGTAAATTaGCCAAAAGTGCTTCATTACCTTGCCCAGCAAGAA +
Preference number: 3 (lower is better)
Translates to: LRGINPLILQVN*PKVLHYLAQQE
Trigger: TTCTTGCTGGGCAAGGTAATGAAGCACTTTTGGCCAATTTACCTGTAAAATGAGAGGGTTAATACCTCTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR-3UTR CAA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGTTTCCCAAATTCACATaGATGCTGAGGCTCTTTATT +
Preference number: 3 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGFPKFT*MLRLFI
Trigger: AATAAAGAGCCTCAGCATCAATGTGAATTTGGGAAA...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
3UTR-3UTR CAA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCTCGGACTCTTCAATATaGATCTGTAGGGATTCTTTA +
Preference number: 3 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEISDSSI*ICRDSL
Trigger: TAAAGAATCCCTACAGATCAATATTGAAGAGTCCGA...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
3UTR-3UTR CAA 90 bp TTCACAATGGTGTGTAACTGTCACCACAATCTATTTCCAGAAGTTTTTCATCATCTTATTTCTCTGCTGTaGTCTACCACTCCATTCCTT +
Preference number: 3 (lower is better)
Translates to: FTMVCNCHHNLFPEVFHHLISLL*STTPFL
Trigger: AAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAG...ATGATGAAAAACTTCTGGAAATAGATTGTGGTGACAGTTACACACCATTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR TCA 90 bp GAAGCCTTCTCGGTGGATGACTGGCCCTTGCCAATCTTTGTACTGGGGTTTGCTGCTCTGAACCGTGCTTaGGGGCAGGGCCTGCTCTTG +
Preference number: 4 (lower is better)
Translates to: EAFSVDDWPLPIFVLGFAALNRA*GQGLLL
Trigger: CAAGAGCAGGCCCTGCCCTCAAGCACGGTTCAGAGC...AGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR GCA 90 bp CAGGGCCTGCTCTTGGATCCAGCCTCCCAGGAAGCCTTCTCGGTGGATGACTGGTGGATGACTGGCCCTTaGCAATCTTTGTACTGGGGT +
Preference number: 4 (lower is better)
Translates to: QGLLLDPASQEAFSVDDWWMTGP*QSLYWG
Trigger: ACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCA...CCAGTCATCCACCGAGAAGGCTTCCTGGGAGGCTGGATCCAAGAGCAGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR GCA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAGCGGAGGCAAAATCCTaGCGGGGTGCGCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGAEAKS*RGAPAA
Trigger: GGCTGCAGGCGCACCCCGGCAGGATTTTGCCTCCGC...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp GAAGCCTTCTCGGTGGATGACTGGCCCTTGCCAATCTTTGTACTGGGGTTTGCTAGCCTTCTCGGTGGATaGCTGGCCCTTGCCAATCTT +
Preference number: 4 (lower is better)
Translates to: EAFSVDDWPLPIFVLGFASLLGG*LALANL
Trigger: AAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCT...AGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR CCA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAGTTCTGCTCCCGCAGTaGCTCCCTCCAGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGVLLPQ*LPPGSG
Trigger: ACCAGACCCTGGAGGGAGCCACTGCGGGAGCAGAAC...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp GAAGCCTTCTCGGTGGATGACTGGCCCTTGCCAATCTTTGTACTGGGGTTTGCTAGGAAGCCTTCTCGGTaGATGACTGGCCCTTGCCAA +
Preference number: 4 (lower is better)
Translates to: EAFSVDDWPLPIFVLGFARKPSR*MTGPCQ
Trigger: TTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTCCT...AGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR CAA 72 bp GCCTCCCAGGAAGCCTTCTCGGTGGATGACTGGCCCTaGCCAATCTTTGTACTGGGGTTTGCTGAACTTAGA +
Preference number: 4 (lower is better)
Translates to: ASQEAFSVDDWP*PIFVLGFAELR
Trigger: TCTAAGTTCAGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTCCTGGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR GCA 90 bp GATGACTGGCCCTTGCCAATCTTTGTACTGGGGTTTGCTGAACTTAGAGTGAGGGAAAGCTCTGAACCGTaGTTGAGGGCAGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: DDWPLPIFVLGFAELRVRESSEP*LRAGPA
Trigger: AGCAGGCCCTGCCCTCAAGCACGGTTCAGAGCTTTC...CCTCACTCTAAGTTCAGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR GCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATCTGCCGGGGTGCGCCTaGAGCCAGGCCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANLPGCA*SQALAS
Trigger: GGAGGCCAAGGCCTGGCTGCAGGCGCACCCCGGCAG...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTGCGGAGGCAAAATCCTaGCGGGGTGCGCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAAEAKS*RGAPAA
Trigger: GGCTGCAGGCGCACCCCGGCAGGATTTTGCCTCCGC...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCACACATGTGCAGCCAGTaGATCTACACTGCTACCACC +
Preference number: 4 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSHMCSQ*IYTATT
Trigger: GGTGGTAGCAGTGTAGATTCACTGGCTGCACATGTG...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTGCCGGGGTGCGCCTaGAGCCAGGCCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTLPGCA*SQALAS
Trigger: GGAGGCCAAGGCCTGGCTGCAGGCGCACCCCGGCAG...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGCCTCGGGCTCCATGTTaGTGTCTCGCTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQPRAPC*CLALGG
Trigger: GCCGCCCAGAGCGAGACACCAACATGGAGCCCGAGG...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTCTTGTGCCTAGCACCTaGGCTGGGAAGTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTLVPST*AGKSGA
Trigger: TGCTCCAGACTTCCCAGCTCAGGTGCTAGGCACAAG...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp GGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCCCTTGTTTGCTCTGGGGTaGCCTTCTGATCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: GVFSALEIKWRLHADWRPLFALG*PSDPFV
Trigger: CACAAAGGGATCAGAAGGTCACCCCAGAGCAAACAA...GGGCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR TCA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATCAGCTCACTCTCCTCTaGGGGCCGACAATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNQLTLL*GPTIRR
Trigger: TCTTCGGATTGTCGGCCCTCAGAGGAGAGTGAGCTG...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp GAAGCCTTCTCGGTGGATGACTGGCCCTTGCCAATCTTTGTACTGGGGTTTGCTGGAAGAACTATGAGTTaGCCTCATGCACCATGGGTT +
Preference number: 4 (lower is better)
Translates to: EAFSVDDWPLPIFVLGFAGRTMS*PHAPWV
Trigger: AACCCATGGTGCATGAGGTCAACTCATAGTTCTTCC...AGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR GCA 90 bp TCCTCTAGCCCCCGGAAAGCCCTGTTCTACATTCTGTCTCTACGAACTTGCCTAGAGCTACTCCTTTCGTaGAGAGCCACCTCTCTATCT +
Preference number: 4 (lower is better)
Translates to: SSSPRKALFYILSLRTCLELLLS*RATSLS
Trigger: AGATAGAGAGGTGGCTCTGCACGAAAGGAGTAGCTC...TAGGCAAGTTCGTAGAGACAGAATGTAGAACAGGGCTTTCCGGGGGCTAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR GCA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCATGTCTCCTTCTGGTGTaGTCAGAAGTCACTAGGGGA +
Preference number: 4 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSCLLLV*SEVTRG
Trigger: TCCCCTAGTGACTTCTGAGCACACCAGAAGGAGACA...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTGCCGGGGTGCGCCTaGAGCCAGGCCTTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLPGCA*SQALAS
Trigger: GGAGGCCAAGGCCTGGCTGCAGGCGCACCCCGGCAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAATCCTGCCGGGGTaGGCCTGCAGCCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQKILPG*ACSQAL
Trigger: CAAGGCCTGGCTGCAGGCGCACCCCGGCAGGATTTT...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTAAAATCCTGCCGGGGTaGGCCTGCAGCCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAKILPG*ACSQAL
Trigger: CAAGGCCTGGCTGCAGGCGCACCCCGGCAGGATTTT...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGGGTTCTGCCGTCCTCTaGTCATTTCTGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ELRHLHFHSARVFLPLARGSAVL*SFLRVQ
Trigger: CTGGACCCTCAGAAATGACCAGAGGACGGCAGAACC...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CCA 90 bp GGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCCCGGCAATAATAAAGGCTaGCCATCTGTGCCGCGAGAA +
Preference number: 4 (lower is better)
Translates to: GVFSALEIKWRLHADWRPGNNKG*PSVPRE
Trigger: TTCTCGCGGCACAGATGGCCAGCCTTTATTATTGCC...GGGCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CCA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCAGGGTTTTTCTCCCACTaGCAAGGATGCCTTAGTCAC +
Preference number: 4 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSGFFSH*QGCLSH
Trigger: GTGACTAAGGCATCCTTGCCAGTGGGAGAAAAACCC...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp GGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCCCGGGTTTTTCTCCCACTaGCAAGGATGCCTTAGTCAC +
Preference number: 4 (lower is better)
Translates to: GVFSALEIKWRLHADWRPGFFSH*QGCLSH
Trigger: GTGACTAAGGCATCCTTGCCAGTGGGAGAAAAACCC...GGGCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CCA 90 bp TGGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTTGTCCATTATGTTTTGGGTTCTGCTCCCGCAGTaGCTCCCTCCAGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: WGDLLIPLWITNLSIMFWVLLPQ*LPPGSG
Trigger: ACCAGACCCTGGAGGGAGCCACTGCGGGAGCAGAAC...CCAAAACATAATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CCA 90 bp GAAGCCTTCTCGGTGGATGACTGGCCCTTGCCAATCTTTGTACTGGGGTTTGCTTTCTCGGTGGATGACTaGCCCTTGCCAATCTTTGTA +
Preference number: 4 (lower is better)
Translates to: EAFSVDDWPLPIFVLGFAFSVDD*PLPIFV
Trigger: TACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAA...AGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
3UTR CAA 72 bp CAAACAGAAACTCTGTACCCACTAGGCAAGAACTCCTaGTCTTCTCCTCTAGCCCCCGGAAAGCCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: QTETLYPLGKNS*SSPLAPGKPCS
Trigger: AGAACAGGGCTTTCCGGGGGCTAGAGGAGAAGACAAGGAGTTCTTGCCTAGTGGGTACAGAGTTTCTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR TCA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGATCATGGCCAAAAGCTTaGATCAGCCGGGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGSWPKA*ISRAVS
Trigger: TGACACTGCCCGGCTGATTCAAGCTTTTGGCCATGA...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp GCCTCCCAGGAAGCCTTCTCGGTGGATGACTGGCCCTTGCCAATCTTTGTACTGTTTCTCCCCAGAAGTTaGTTGGTCACTCTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: ASQEAFSVDDWPLPIFVLFLPRS*LVTLFL
Trigger: TAAAAAGAGAGTGACCAATCAACTTCTGGGGAGAAA...CAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTCCTGGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR TCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTGGGCTTTTCTCCAAGTaGAGAGGACGCAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIGLFSK*RGRRGS
Trigger: ACTTCCTCTGCGTCCTCTTCACTTGGAGAAAAGCCC...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAACCTTCTGTATGCACCTaGTGCTTGGGCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQPSVCT*CLGFPL
Trigger: CAGAGGAAAGCCCAAGCAGCAGGTGCATACAGAAGG...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGACCTTCTGTATGCACCTaGTGCTTGGGCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGPSVCT*CLGFPL
Trigger: CAGAGGAAAGCCCAAGCAGCAGGTGCATACAGAAGG...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAACATATTCCAGGCATGTaGTCGTACCCGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQHIPGM*SYPAFL
Trigger: GAGGAAAGCCGGGTACGAGCACATGCCTGGAATATG...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp AGGGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCTCCCACTGGCAAGGATaGCTTAGTCACTACCCTCTT +
Preference number: 4 (lower is better)
Translates to: RGYSLPWKSNGDYMQTGGSHWQG*LSHYPL
Trigger: AAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGA...GCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR GCA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTTCAGGCTGTCTCTGTTaGCTCTGTCGCTCCCGATAC +
Preference number: 4 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTSGCLC*LCRSRY
Trigger: GTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGA...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCGCTCGGTCTGTAACATaGTCTGCAGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPARSVT*SAASSP
Trigger: AGGAGAGGAAGCTGCAGAGCATGTTACAGACCGAGC...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCGTTCTGCTCCCGCAGTaGCTCCCTCCAGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLVLLPQ*LPPGSG
Trigger: ACCAGACCCTGGAGGGAGCCACTGCGGGAGCAGAAC...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp GCCTCCCAGGAAGCCTTCTCGGTGGATGACTGGCCCTTGCCAATCTTTGTACTGCTTTTTCTGTACTTCTaGAAGCTGCTCATAAATCCG +
Preference number: 4 (lower is better)
Translates to: ASQEAFSVDDWPLPIFVLLFLYF*KLLINP
Trigger: CGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAG...CAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTCCTGGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR CCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATCAGCTCGCCCGGCCATaGCAGATCCTCGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANQLARP*QILGLH
Trigger: ATGGAGCCCGAGGATCTGCCATGGCCGGGCGAGCTG...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTTGGTGTTTCCTCACATaGTCATCTGCACGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIWCFLT*SSARGA
Trigger: AGCCCCACGTGCAGATGACCATGTGAGGAAACACCA...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGATCCTCTGGTCATTTCTaGGGGTCCAGCAGATCTGAA +
Preference number: 4 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGSSGHF*GSSRSE
Trigger: TTCAGATCTGCTGGACCCTCAGAAATGACCAGAGGA...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTCTTGTGCCTAGCACCTaGGCTGGGAAGTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMALVPST*AGKSGA
Trigger: TGCTCCAGACTTCCCAGCTCAGGTGCTAGGCACAAG...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGTTGTTTGCTCTGGGGTaGCCTTCTGATCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: ELRHLHFHSARVFLPLARLFALG*PSDPFV
Trigger: CACAAAGGGATCAGAAGGTCACCCCAGAGCAAACAA...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGCAGCTCACTCTCCTCTaGGGGCCGACAATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSQLTLL*GPTIRR
Trigger: TCTTCGGATTGTCGGCCCTCAGAGGAGAGTGAGCTG...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGCAGCTCACTCTCCTCTaGGGGCCGACAATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLQLTLL*GPTIRR
Trigger: TCTTCGGATTGTCGGCCCTCAGAGGAGAGTGAGCTG...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TGGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTTGTCCATTATGTTTTGGCAGCTCACTCTCCTCTaGGGGCCGACAATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: WGDLLIPLWITNLSIMFWQLTLL*GPTIRR
Trigger: TCTTCGGATTGTCGGCCCTCAGAGGAGAGTGAGCTG...CCAAAACATAATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp TTGGTACTACCAGAAGGCTTATATGGCAATAATAAAGGCTGGCCATCTGTGCCGTCATGGCCAAAAGCTTaGATCAGCCGGGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: LVLPEGLYGNNKGWPSVPSWPKA*ISRAVS
Trigger: TGACACTGCCCGGCTGATTCAAGCTTTTGGCCATGA...CGGCACAGATGGCCAGCCTTTATTATTGCCATATAAGCCTTCTGGTAGTACCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGAAGGGGAGAGCCCTaGCTGGCGGTTGTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGRGEP*LAVVAQ
Trigger: CTGGGCCACAACCGCCAGTCAGGGCTCTCCCCTTCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484298.5
CDS-3UTR GCA 90 bp GGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCCCCAATATCCTTCTGTATaGACCTGCTGCTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GVFSALEIKWRLHADWRPQYPSV*TCCLGF
Trigger: AAAGCCCAAGCAGCAGGTGCATACAGAAGGATATTG...GGGCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCGGAGGCAAAATCCTaGCGGGGTGCGCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLAEAKS*RGAPAA
Trigger: GGCTGCAGGCGCACCCCGGCAGGATTTTGCCTCCGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGGGCAATAATAAAGGCTaGCCATCTGTGCCGCGAGAA +
Preference number: 4 (lower is better)
Translates to: ELRHLHFHSARVFLPLARGNNKG*PSVPRE
Trigger: TTCTCGCGGCACAGATGGCCAGCCTTTATTATTGCC...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCCTGAGCTGGGAAGTCTaGAGCAATGGCATCATTGGA +
Preference number: 4 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPLSWEV*SNGIIG
Trigger: TCCAATGATGCCATTGCTCCAGACTTCCCAGCTCAG...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGATCTTTTTCTTTAGCCTaGGCAGCCTCAGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGSFSLA*AASVTA
Trigger: GGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGA...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CAAAGATTCTTTTTCTTTAGCCTGGGCAGCCTCAGTCACTGCCCTTGTACTGTGGCTCCCTCCAGGGTCTaGTCTTGGTTATTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: QRFFFFSLGSLSHCPCTVAPSRV*SWLLVQ
Trigger: TTGAACCAATAACCAAGACCAGACCCTGGAGGGAGC...CACAGTACAAGGGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGAATCTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCAGCTCGCCCGGCCATaGCAGATCCTCGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTQLARP*QILGLH
Trigger: ATGGAGCCCGAGGATCTGCCATGGCCGGGCGAGCTG...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGATCGATCTGCAAATACTaGGGTCCCCTCTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGSICKY*GPLWIG
Trigger: TCCAATCCAGAGGGGACCCCAGTATTTGCAGATCGA...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp GGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCCCGCTGGAACTTGGAGTTaGGAAAGTTATCCCAACATC +
Preference number: 4 (lower is better)
Translates to: GVFSALEIKWRLHADWRPAGTWS*ESYPNI
Trigger: GATGTTGGGATAACTTTCCCAACTCCAAGTTCCAGC...GGGCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGCCTCGCTGGAACTTaGAGTTGGGAAAGTTATCCC +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTISLAGT*SWESYP
Trigger: GGGATAACTTTCCCAACTCCAAGTTCCAGCGAGGCT...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp GTTGTCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGAGCCTCGCTGGAACTTaGAGTTGGGAAAGTTATCCC +
Preference number: 4 (lower is better)
Translates to: VVYHSIPSHFVPLCYHHVSLAGT*SWESYP
Trigger: GGGATAACTTTCCCAACTCCAAGTTCCAGCGAGGCT...CACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR TCA 90 bp TTCTCCCACTGGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTCCCTGCTCATAAGAAATaGCAGAGTGCTCTCTCTGTG +
Preference number: 4 (lower is better)
Translates to: FSHWQGCLSHYPLTVDSFPAHKK*QSALSV
Trigger: CACAGAGAGAGCACTCTGTCATTTCTTATGAGCAGG...GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR TCA 90 bp TTCTCCCACTGGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTCGGGCTTCTCTATTTGTaGGTAGGAACTAAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: FSHWQGCLSHYPLTVDSFGLLYL*VGTKGS
Trigger: GCTACCCTTAGTTCCTACTCACAAATAGAGAAGCCC...GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR TCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTGGGCTTCTCTATTTGTaGGTAGGAACTAAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIGLLYL*VGTKGS
Trigger: GCTACCCTTAGTTCCTACTCACAAATAGAGAAGCCC...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCACCTTTGGACATGTTCTaGAACAAGCTTGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSPLDMF*NKLVIL
Trigger: GAGAATCACAAGCTTGTTTCAGAACATGTCCAAAGG...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR TCA 90 bp CAAAGATTCTTTTTCTTTAGCCTGGGCAGCCTCAGTCACTGCCCTTGTACTGTGATGATGAGGCAAACTTaGCAGGAGCTTTGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: QRFFFFSLGSLSHCPCTVMMRQT*QELCVA
Trigger: AGCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCAT...CACAGTACAAGGGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGAATCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CAAAGATTCTTTTTCTTTAGCCTGGGCAGCCTCAGTCACTGCCCTTGTACTGTGTTCAACGGTGGTATCTaGTTTGGAATCCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: QRFFFFSLGSLSHCPCTVFNGGI*FGIRRW
Trigger: CCATCTCCGGATTCCAAATCAGATACCACCGTTGAA...CACAGTACAAGGGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGAATCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATCTTGTGCCTAGCACCTaGGCTGGGAAGTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNLVPST*AGKSGA
Trigger: TGCTCCAGACTTCCCAGCTCAGGTGCTAGGCACAAG...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR TCA 90 bp TCCTCTAGCCCCCGGAAAGCCCTGTTCTACATTCTGTCTCTACGAACTTGCCTAAATGTTAACAGTGGCTaGGAGGTCATCATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: SSSPRKALFYILSLRTCLNVNSG*EVIISC
Trigger: ACAAGAGATGATGACCTCTCAGCCACTGTTAACATT...TAGGCAAGTTCGTAGAGACAGAATGTAGAACAGGGCTTTCCGGGGGCTAGAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR TCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTCTGGGTCTCCTACTTaGGCTGAGTGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMASGSPT*AECSAA
Trigger: TGCTGCAGAGCACTCAGCTCAAGTAGGAGACCCAGA...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTAAACTCACAGTGTGCTaGGTTGTTTGCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTKLTVC*VVCSGV
Trigger: CACCCCAGAGCAAACAACTCAGCACACTGTGAGTTT...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTCAGCTCACTCTCCTCTaGGGGCCGACAATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSQLTLL*GPTIRR
Trigger: TCTTCGGATTGTCGGCCCTCAGAGGAGAGTGAGCTG...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAAGAAGTCACTAGGGGATaGCCTGTATTCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQEVTRG*PVFSTF
Trigger: GAAAGTGCTGAATACAGGTCATCCCCTAGTGACTTC...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTGAAGTCACTAGGGGATaGCCTGTATTCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIEVTRG*PVFSTF
Trigger: GAAAGTGCTGAATACAGGTCATCCCCTAGTGACTTC...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CAAAGATTCTTTTTCTTTAGCCTGGGCAGCCTCAGTCACTGCCCTTGTACTGTGGAAGTCACTAGGGGATaGCCTGTATTCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: QRFFFFSLGSLSHCPCTVEVTRG*PVFSTF
Trigger: GAAAGTGCTGAATACAGGTCATCCCCTAGTGACTTC...CACAGTACAAGGGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGAATCTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGATGGTCCAGTAACAGCTaGAACTTTCTGAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGWSSNS*NFLSLF
Trigger: GAAGAGGCTCAGAAAGTTTCAGCTGTTACTGGACCA...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGCATGATGATGGGTTCTaGCGTCCTCTGGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: ELRHLHFHSARVFLPLARHDDGF*RPLVIS
Trigger: AGAAATGACCAGAGGACGGCAGAACCCATCATCATG...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR GCA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCCATGATGATGGGTTCTaGCGTCCTCTGGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPHDDGF*RPLVIS
Trigger: AGAAATGACCAGAGGACGGCAGAACCCATCATCATG...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTCAGGCTGTCTCTGTTaGCTCTGTCGCTCCCGATAC +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGSGCLC*LCRSRY
Trigger: GTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGA...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAAGAGCTACTCCTTTCGTaGAGAGCCACCTCTCTATCT +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKELLLS*RATSLS
Trigger: AGATAGAGAGGTGGCTCTGCACGAAAGGAGTAGCTC...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTGACTCAACCTTCCCCTaGAGGCCCTTGGTTAAATAT +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIDSTFP*RPLVKY
Trigger: ATATTTAACCAAGGGCCTGCAGGGGAAGGTTGAGTC...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTGGTTCTGCCGTCCTCTaGTCATTTCTGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAGSAVL*SFLRVQ
Trigger: CTGGACCCTCAGAAATGACCAGAGGACGGCAGAACC...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCAGCTTTGCGTAGCTTCTaGTTACCAGGCTCTATAATT +
Preference number: 4 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSALRSF*LPGSII
Trigger: AATTATAGAGCCTGGTAACCAGAAGCTACGCAAAGC...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTGGGAGCTTTCAACGGTaGTATCTGATTTGGAATCCG +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIGSFQR*YLIWNP
Trigger: CGGATTCCAAATCAGATACCACCGTTGAAAGCTCCC...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTTCTTTTTCTTTAGCCTaGGCAGCCTCAGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTSFSLA*AASVTA
Trigger: GGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGA...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGCAGCAGCAGCAGCACTaGAATCTGCAGTATCTTTCT +
Preference number: 4 (lower is better)
Translates to: ELRHLHFHSARVFLPLARQQQQH*NLQYLS
Trigger: AGAAAGATACTGCAGATTCCAGTGCTGCTGCTGCTG...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTCAGCAGCAGCAGCACTaGAATCTGCAGTATCTTTCT +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIQQQQH*NLQYLS
Trigger: AGAAAGATACTGCAGATTCCAGTGCTGCTGCTGCTG...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTCTGAGTTGTTTGCTCTaGGGTGACCTTCTGATCCCT +
Preference number: 4 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTLSCLL*GDLLIP
Trigger: AGGGATCAGAAGGTCACCCCAGAGCAAACAACTCAG...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCTCCAGGGTCTGGTCTTaGTTATTGGTTCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPSRVWS*LLVQTR
Trigger: CCTGGTTTGAACCAATAACCAAGACCAGACCCTGGA...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGTCCAGGGTCTGGTCTTaGTTATTGGTTCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: ELRHLHFHSARVFLPLARSRVWS*LLVQTR
Trigger: CCTGGTTTGAACCAATAACCAAGACCAGACCCTGGA...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTCCAGGAAGACTCTCTTaGGCAGCGGGCACATGCGAT +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSPGRLS*AAGTCD
Trigger: ATCGCATGTGCCCGCTGCCCAAGAGAGTCTTCCTGG...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATCCAGGAAGACTCTCTTaGGCAGCGGGCACATGCGAT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNPGRLS*AAGTCD
Trigger: ATCGCATGTGCCCGCTGCCCAAGAGAGTCTTCCTGG...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCTCGGGCTCCATGTTaGTGTCTCGCTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPRAPC*CLALGG
Trigger: GCCGCCCAGAGCGAGACACCAACATGGAGCCCGAGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCAGCTCGCCCGGCCATaGCAGATCCTCGGGCTCCAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLQLARP*QILGLH
Trigger: ATGGAGCCCGAGGATCTGCCATGGCCGGGCGAGCTG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTGCCTCTTCGGGTAGATaGCTGTCCAGCAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACASSGR*LSSKAC
Trigger: ACAGGCCTTGCTGGACAGCCATCTACCCGAAGAGGC...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCGATGCTCCAGTACACTaGCTACCTTCAGTAACACCA +
Preference number: 4 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPDAPVH*LPSVTP
Trigger: TGGTGTTACTGAAGGTAGCCAGTGTACTGGAGCATC...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTTGCTACAATTTGCCCTaGTACTGGGCTCAGAATGAC +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTICYNLP*YWAQND
Trigger: GTCATTCTGAGCCCAGTACCAGGGCAAATTGTAGCA...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TTCTCCCACTGGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTCTGGTTTCTCTCGATGTaGAAAGGAACTAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: FSHWQGCLSHYPLTVDSFWFLSM*KGTRKS
Trigger: GCTCTTCCTAGTTCCTTTTCACATCGAGAGAAACCA...GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR TCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGCACATGTGCAGCCAGTaGATCTACACTGCTACCACC +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQHMCSQ*IYTATT
Trigger: GGTGGTAGCAGTGTAGATTCACTGGCTGCACATGTG...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCTTGTGCCTAGCACCTaGGCTGGGAAGTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHLVPST*AGKSGA
Trigger: TGCTCCAGACTTCCCAGCTCAGGTGCTAGGCACAAG...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGTCTGGGTCTCCTACTTaGGCTGAGTGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMSGSPT*AECSAA
Trigger: TGCTGCAGAGCACTCAGCTCAAGTAGGAGACCCAGA...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCTGGGTCTCCTACTTaGGCTGAGTGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLSGSPT*AECSAA
Trigger: TGCTGCAGAGCACTCAGCTCAAGTAGGAGACCCAGA...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR TCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCAGCTCACTCTCCTCTaGGGGCCGACAATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSQLTLL*GPTIRR
Trigger: TCTTCGGATTGTCGGCCCTCAGAGGAGAGTGAGCTG...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTCATGGCCAAAAGCTTaGATCAGCCGGGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLSWPKA*ISRAVS
Trigger: TGACACTGCCCGGCTGATTCAAGCTTTTGGCCATGA...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTCATGGCCAAAAGCTTaGATCAGCCGGGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGSWPKA*ISRAVS
Trigger: TGACACTGCCCGGCTGATTCAAGCTTTTGGCCATGA...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTGGTCCAGGAGTGGCTaGAACTTTAGTAAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNWSRSG*NFSKSL
Trigger: GAGACTCTTACTAAAGTTTCAGCCACTCCTGGACCA...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCGCCTCTTTAGGCAGATaGCTCTCTGGCAAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGASLGR*LSGKVC
Trigger: ACAGACCTTGCCAGAGAGTCATCTGCCTAAAGAGGC...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCGGGAGACGGAAGGTCTaGAGCTATAGAATCCTGACC +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGGRRKV*SYRILT
Trigger: GGTCAGGATTCTATAGCTTCAGACCTTCCGTCTCCC...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGGCTGCTAATGTACAGTaGTTTGGGGCTGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQAANVQ*FGADWE
Trigger: CTCCCAGTCAGCCCCAAATCACTGTACATTAGCAGC...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGACAGTGCCATATTTTCTaGCTCCATCAAAAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGQCHIF*LHQKCP
Trigger: CGGACACTTTTGATGGAGGCAGAAAATATGGCACTG...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAACAGTGCCATATTTTCTaGCTCCATCAAAAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQQCHIF*LHQKCP
Trigger: CGGACACTTTTGATGGAGGCAGAAAATATGGCACTG...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp TTCTCCCACTGGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTCGGGGAGCAGGAAAATTaGATCGTTTCAGTGCCATAT +
Preference number: 4 (lower is better)
Translates to: FSHWQGCLSHYPLTVDSFGEQEN*IVSVPY
Trigger: ATATGGCACTGAAACGATGCAATTTTCCTGCTCCCC...GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCATCAAATTCGTCTGTGTaGCAATATCCTTCTGTATGC +
Preference number: 4 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSSNSSV*QYPSVC
Trigger: GCATACAGAAGGATATTGGCACACAGACGAATTTGA...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp TTCTCCCACTGGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTCCACCCTCTTCCTCCCTaGTATCTGTTATACTTGTCT +
Preference number: 4 (lower is better)
Translates to: FSHWQGCLSHYPLTVDSFHPLPP*YLLYLS
Trigger: AGACAAGTATAACAGATAGCAGGGAGGAAGAGGGTG...GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp TGGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTTGTCCATTATGTTTTGGCATATTCCAGGCATGTaGTCGTACCCGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: WGDLLIPLWITNLSIMFWHIPGM*SYPAFL
Trigger: GAGGAAAGCCGGGTACGAGCACATGCCTGGAATATG...CCAAAACATAATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCGGTCATCATCTCTTGTaGCTAGCACCTGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGGHHLL*LAPELG
Trigger: TCCCAGCTCAGGTGCTAGGCACAAGAGATGATGACC...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp AGGGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCAGCAGCACTGGAATCTaGAGTATCTTTCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RGYSLPWKSNGDYMQTGGSSTGI*SIFLQR
Trigger: TCTTTGCAGAAAGATACTGCAGATTCCAGTGCTGCT...GCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR GCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTCAGGCTGTCTCTGTTaGCTCTGTCGCTCCCGATAC +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNSGCLC*LCRSRY
Trigger: GTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR GCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTTCAGGCTGTCTCTGTTaGCTCTGTCGCTCCCGATAC +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSSGCLC*LCRSRY
Trigger: GTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGA...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR GCA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAACTTTCTTGCTGTGTTTaGTCCGCTTCTCAAGGTATC +
Preference number: 4 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQLSCCV*SASQGI
Trigger: GATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAG...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAAAATCCTGCCGGGGTaGGCCTGCAGCCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLKILPG*ACSQAL
Trigger: CAAGGCCTGGCTGCAGGCGCACCCCGGCAGGATTTT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTCCTGTGTCCAATACTaGCCATATGAACGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNSCVQY*PYERAA
Trigger: TGCTGCTCGTTCATATGGGCAGTATTGGACACAGGA...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGGGAAGTCTGGAGCAATaGCATCATTGGATCCTGAAT +
Preference number: 4 (lower is better)
Translates to: ELRHLHFHSARVFLPLARGSLEQ*HHWILN
Trigger: ATTCAGGATCCAATGATGCCATTGCTCCAGACTTCC...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGTTCTGCTCCCGCAGTaGCTCCCTCCAGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLVLLPQ*LPPGSG
Trigger: ACCAGACCCTGGAGGGAGCCACTGCGGGAGCAGAAC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACTCTTTTTATATAGCTaGGCTCGCAGCCGGTATGAC +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKLFLYS*ARSRYD
Trigger: GTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCTGACTGGCGGTTGTaGCCCAGCTTAGGCGCAGTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPDWRL*PSLGAV
Trigger: CACTGCGCCTAAGCTGGGCCACAACCGCCAGTCAGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484298.5
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGGGAGAGCCCTGACTaGCGGTTGTGGCCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGESPD*RLWPSL
Trigger: TAAGCTGGGCCACAACCGCCAGTCAGGGCTCTCCCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484298.5
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGTTGGTGTCTCGCTCTaGGCGGCAGAGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLVGVSL*AAEEEE
Trigger: CTCCTCCTCCTCTGCCGCCCAGAGCGAGACACCAAC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484298.5
CDS-3UTR CCA 90 bp ATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAGCCTCTTCGGGTAGATaGCTGTCCAGCAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: IGQGHYAESIAPKPLGILASSGR*LSSKAC
Trigger: ACAGGCCTTGCTGGACAGCCATCTACCCGAAGAGGC...TAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAAGTTGGGACAGTCTTCTaGTCAGTCAGTCCAGGAATA +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKVGTVF*SVSPGI
Trigger: TATTCCTGGACTGACTGACCAGAAGACTGTCCCAAC...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TTGGTACTACCAGAAGGCTTATATGGCAATAATAAAGGCTGGCCATCTGTGCCGACATGGTTTGCTACCTaGATGTGTCTCCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LVLPEGLYGNNKGWPSVPTWFAT*MCLLLV
Trigger: CACCAGAAGGAGACACATCCAGGTAGCAAACCATGT...CGGCACAGATGGCCAGCCTTTATTATTGCCATATAAGCCTTCTGGTAGTACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR CAA 72 bp AAAGTAACCTGTTGGACTGAAGATGATGAGGCAAACTaGACAGGAGCTTTGCGTAGCTTCTGGTTACCAGGC +
Preference number: 4 (lower is better)
Translates to: KVTCWTEDDEAN*TGALRSFWLPG
Trigger: GCCTGGTAACCAGAAGCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCATCTTCAGTCCAACAGGTTACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCCCTTTGGACATGTTCTaGAACAAGCTTGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPPLDMF*NKLVIL
Trigger: GAGAATCACAAGCTTGTTTCAGAACATGTCCAAAGG...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CAAAGATTCTTTTTCTTTAGCCTGGGCAGCCTCAGTCACTGCCCTTGTACTGTGGTGAATGGCTGTCTGTaGAGCAAATCACCATTAGAT +
Preference number: 4 (lower is better)
Translates to: QRFFFFSLGSLSHCPCTVVNGCL*SKSPLD
Trigger: ATCTAATGGTGATTTGCTTCACAGACAGCCATTCAC...CACAGTACAAGGGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGAATCTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTTGGGCTTTCCTCTGTaGATGGCTGTCTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMALGFPL*MAVCEA
Trigger: TGCTTCACAGACAGCCATTCACAGAGGAAAGCCCAA...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCACATGTGCAGCCAGTaGATCTACACTGCTACCACC +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGHMCSQ*IYTATT
Trigger: GGTGGTAGCAGTGTAGATTCACTGGCTGCACATGTG...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAACAAATAACTCTGCCTTaGTCTCTTCTACTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQQITLP*SLLLSS
Trigger: GGAGGAAAGTAGAAGAGATCAAGGCAGAGTTATTTG...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTTCCTCTGGTCATTTCTaGGGGTCCAGCAGATCTGAA +
Preference number: 4 (lower is better)
Translates to: SILICRDSLLFGQASSGTSSGHF*GSSRSE
Trigger: TTCAGATCTGCTGGACCCTCAGAAATGACCAGAGGA...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR TCA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAACTTGTGCCTAGCACCTaGGCTGGGAAGTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKLVPST*AGKSGA
Trigger: TGCTCCAGACTTCCCAGCTCAGGTGCTAGGCACAAG...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAATGTTAACAGTGGCTaGGAGGTCATCATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPNVNSG*EVIISC
Trigger: ACAAGAGATGATGACCTCTCAGCCACTGTTAACATT...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTTCTGGGTCTCCTACTTaGGCTGAGTGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTSGSPT*AECSAA
Trigger: TGCTGCAGAGCACTCAGCTCAAGTAGGAGACCCAGA...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGTCTGGGGTGACCTTCTaGTCCCTTTGTGGATCACTA +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQSGVTF*SLCGSL
Trigger: TAGTGATCCACAAAGGGATCAGAAGGTCACCCCAGA...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTCTGGGGTGACCTTCTaGTCCCTTTGTGGATCACTA +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMASGVTF*SLCGSL
Trigger: TAGTGATCCACAAAGGGATCAGAAGGTCACCCCAGA...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTGCTCTGGGGTaGCCTTCTGATCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGLFALG*PSDPFV
Trigger: CACAAAGGGATCAGAAGGTCACCCCAGAGCAAACAA...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTTCATGGCCAAAAGCTTaGATCAGCCGGGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSSWPKA*ISRAVS
Trigger: TGACACTGCCCGGCTGATTCAAGCTTTTGGCCATGA...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCATGGCCAAAAGCTTaGATCAGCCGGGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLSWPKA*ISRAVS
Trigger: TGACACTGCCCGGCTGATTCAAGCTTTTGGCCATGA...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp AAAGGGAAGAACTATGAGTTGACCTCATGCACCATGGGTTCTTTTCCCAGTGTCGAAAGGGAAGAACTATaGGTTGACCTCATGCACCAT +
Preference number: 4 (lower is better)
Translates to: KGKNYELTSCTMGSFPSVEREEL*VDLMHH
Trigger: ATGGTGCATGAGGTCAACTCATAGTTCTTCCCTTTC...GACACTGGGAAAAGAACCCATGGTGCATGAGGTCAACTCATAGTTCTTCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR TCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTGAAGAGTCCATTTCTTaGGGAAGACAATGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIEESIS*GRQCQD
Trigger: ATCTTGGCATTGTCTTCCTCAAGAAATGGACTCTTC...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCATGAGATCCAATGTCTaGATCAACAGGAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPMRSNV*INRSGS
Trigger: ACTACCACTCCTGTTGATTCAGACATTGGATCTCAT...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTGAACTTACAGCCAACTaGGACAGGTCCTCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACELTAN*DRSSRD
Trigger: GTCCCTTGAGGACCTGTCTCAGTTGGCTGTAAGTTC...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp ATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAGGGCTTCCCCCTATGTaGGTGGGAACTAGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: IGQGHYAESIAPKPLGILGLPPM*VGTREY
Trigger: GTACTCTCTAGTTCCCACTCACATAGGGGGAAGCCC...TAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTGGGCTTCCCCCTATGTaGGTGGGAACTAGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFGLPPM*VGTREY
Trigger: GTACTCTCTAGTTCCCACTCACATAGGGGGAAGCCC...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTGAGGTCCTCTACATGTaGGTGGGATGTAGAGGATAC +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAEVLYM*VGCRGY
Trigger: GTATCCTCTACATCCCACTCACATGTAGAGGACCTC...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGGGGCTTTTCTCCAAGTaGAGAGGACGCAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGGLFSK*RGRRGS
Trigger: ACTTCCTCTGCGTCCTCTTCACTTGGAGAAAAGCCC...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATAGGCTTCCCCCTATTTaGGTAGCTAGTAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNRLPPI*VASRMY
Trigger: GTACATTCTACTAGCTACTCAAATAGGGGGAAGCCT...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGGCTGCTAATGTACAGTaGTTTGGGGCTGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGAANVQ*FGADWE
Trigger: CTCCCAGTCAGCCCCAAATCACTGTACATTAGCAGC...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGCTGCTAATGTACAGTaGTTTGGGGCTGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSAANVQ*FGADWE
Trigger: CTCCCAGTCAGCCCCAAATCACTGTACATTAGCAGC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR TCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTATCTGTTGCCATACATaGCAGGTCAATGGAACAATC +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIICCHT*QVNGTI
Trigger: GATTGTTCCATTGACCTGTCATGTATGGCAACAGAT...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAACCTTCTGTATGCACCTaGTGCTTGGGCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQPSVCT*CLGFPL
Trigger: CAGAGGAAAGCCCAAGCAGCAGGTGCATACAGAAGG...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATACAGCTTCTGGCTTaGATCCCATTCCCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQIQLLA*IPFPVD
Trigger: GTCCACGGGGAATGGGATGCAAGCCAGAAGCTGTAT...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTGGTCATCATCTCTTGTaGCTAGCACCTGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACGHHLL*LAPELG
Trigger: TCCCAGCTCAGGTGCTAGGCACAAGAGATGATGACC...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGGTCATCATCTCTTGTaGCTAGCACCTGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSGHHLL*LAPELG
Trigger: TCCCAGCTCAGGTGCTAGGCACAAGAGATGATGACC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR GCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTCCCACTGGCAAGGATaGCTTAGTCACTACCCTCTT +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMASHWQG*LSHYPL
Trigger: AAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGA...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTCCCACTGGCAAGGATaGCTTAGTCACTACCCTCTT +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLSHWQG*LSHYPL
Trigger: AAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGA...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACTCAGGCTGTCTCTGTTaGCTCTGTCGCTCCCGATAC +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHSGCLC*LCRSRY
Trigger: GTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGA...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCAGGCTGTCTCTGTTaGCTCTGTCGCTCCCGATAC +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSSGCLC*LCRSRY
Trigger: GTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGA...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR GCA 90 bp CACTCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGAGCTACTCCTTTCGTaGAGAGCCACCTCTCTATCT +
Preference number: 4 (lower is better)
Translates to: HSFPKIHGKYLDHLVGVRELLLS*RATSLS
Trigger: AGATAGAGAGGTGGCTCTGCACGAAAGGAGTAGCTC...CCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGGAGCTACTCCTTTCGTaGAGAGCCACCTCTCTATCT +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLELLLS*RATSLS
Trigger: AGATAGAGAGGTGGCTCTGCACGAAAGGAGTAGCTC...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACTTTCTTGCTGTGTTTaGTCCGCTTCTCAAGGTATC +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKLSCCV*SASQGI
Trigger: GATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAG...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGTATTCAGCACTTTCTTaGTGTGTTTGCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: ELRHLHFHSARVFLPLARYSALS*CVCSAS
Trigger: AGAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATA...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGTGTCTCCTTCTGGTGTaGTCAGAAGTCACTAGGGGA +
Preference number: 4 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSCLLLV*SEVTRG
Trigger: TCCCCTAGTGACTTCTGAGCACACCAGAAGGAGACA...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATGCTCGGTCTGTAACATaGTCTGCAGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNARSVT*SAASSP
Trigger: AGGAGAGGAAGCTGCAGAGCATGTTACAGACCGAGC...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR GCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGCTCGGTCTGTAACATaGTCTGCAGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSARSVT*SAASSP
Trigger: AGGAGAGGAAGCTGCAGAGCATGTTACAGACCGAGC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR GCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTCTGATTGCGTCAATATaGCCTCCTCCAGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACLIASI*PPPERG
Trigger: TCCCCTCTCTGGAGGAGGGCATATTGACGCAATCAG...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAATACCCCCACAGATaGTCCAGTACACTGGCTACC +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQKYPHR*SSTLAT
Trigger: GGTAGCCAGTGTACTGGAGCATCTGTGGGGGTATTT...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTAAATACCCCCACAGATaGTCCAGTACACTGGCTACC +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAKYPHR*SSTLAT
Trigger: GGTAGCCAGTGTACTGGAGCATCTGTGGGGGTATTT...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAGAGTGCTCTCTCTGTaGGTAGGAATTAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQRVLSL*VGIRGQ
Trigger: CTGCCCTCTAATTCCTACCCACAGAGAGAGCACTCT...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGAGAGTGCTCTCTCTGTaGGTAGGAATTAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLRVLSL*VGIRGQ
Trigger: CTGCCCTCTAATTCCTACCCACAGAGAGAGCACTCT...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTACTAAGGGTAGCTGCTaGAAACTCAGTTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTTKGSC*KLSFLV
Trigger: GACCAGAAAACTGAGTTTCCAGCAGCTACCCTTAGT...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CCA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATAAAAGCTGTCTGGGATaGAGTCTTCTGGTCATTTGG +
Preference number: 4 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNKSCLG*SLLVIW
Trigger: CCAAATGACCAGAAGACTCCATCCCAGACAGCTTTT...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTACTACATACAGCTTCTaGCTTGCATCCCATTCCCCG +
Preference number: 4 (lower is better)
Translates to: SILICRDSLLFGQASSGTTTYSF*LASHSP
Trigger: CGGGGAATGGGATGCAAGCCAGAAGCTGTATGTAGT...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGACTACATACAGCTTCTaGCTTGCATCCCATTCCCCG +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLTTYSF*LASHSP
Trigger: CGGGGAATGGGATGCAAGCCAGAAGCTGTATGTAGT...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCGACACGGTGGTATCTGATTTaGAATCCGGAGATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: LSCRATSLSVWVNISDSTRWYLI*NPEMEE
Trigger: TTCCTCCATCTCCGGATTCCAAATCAGATACCACCG...TGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp TTGGTACTACCAGAAGGCTTATATGGCAATAATAAAGGCTGGCCATCTGTGCCGTCATTGGATCCTGAATaGGAGCTTTCAACGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LVLPEGLYGNNKGWPSVPSLDPE*ELSTVV
Trigger: TACCACCGTTGAAAGCTCCCATTCAGGATCCAATGA...CGGCACAGATGGCCAGCCTTTATTATTGCCATATAAGCCTTCTGGTAGTACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAAGAGCAATGGCATCATTaGATCCTGAATGGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKEQWHH*ILNGSF
Trigger: AAAGCTCCCATTCAGGATCCAATGATGCCATTGCTC...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGGGGTTTTTCTCCCACTaGCAAGGATGCCTTAGTCAC +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLGFFSH*QGCLSH
Trigger: GTGACTAAGGCATCCTTGCCAGTGGGAGAAAAACCC...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp TTGGTGATGCTGCTATATAATTTAATTCGTCTGGGTGACAAGCATACTCTTTCACCAGGAAGACTCTCTTaGGCAGCGGGCACATGCGAT +
Preference number: 4 (lower is better)
Translates to: LVMLLYNLIRLGDKHTLSPGRLS*AAGTCD
Trigger: ATCGCATGTGCCCGCTGCCCAAGAGAGTCTTCCTGG...TGAAAGAGTATGCTTGTCACCCAGACGAATTAAATTATATAGCAGCATCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGGGTGTCCCAGTCTTCTaGGCAGCCAATACAGAAACA +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLGVPVF*AANTET
Trigger: TGTTTCTGTATTGGCTGCCCAGAAGACTGGGACACC...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCAGGTATATGAGTACCTaGCAAGGCCTGCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGRYMST*QGLLVE
Trigger: TTCCACCAGCAGGCCTTGCCAGGTACTCATATACCT...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGTCTCTCCAAGTGCACTaGAACCTAAAGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQSLQVH*NLKVLL
Trigger: CAGCAGGACCTTTAGGTTCCAGTGCACTTGGAGAGA...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTCTCTCCAAGTGCACTaGAACCTAAAGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGSLQVH*NLKVLL
Trigger: CAGCAGGACCTTTAGGTTCCAGTGCACTTGGAGAGA...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGAATTTGCCCTGGTACTaGGCTCAGAATGACTGCCTG +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLNLPWY*AQNDCL
Trigger: CAGGCAGTCATTCTGAGCCCAGTACCAGGGCAAATT...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTGTTTACTCCTAGGGTaGAACTTGGTCTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGCLLLG*NLVCPC
Trigger: GCATGGGCAGACCAAGTTCCACCCTAGGAGTAAACA...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAATGGTGTTTCCTCACATaGTCATCTGCACGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQWCFLT*SSARGA
Trigger: AGCCCCACGTGCAGATGACCATGTGAGGAAACACCA...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATGCAAGAAGGAAGGTCTaGAGCTACATAATCCTGATG +
Preference number: 4 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNARRKV*SYIILM
Trigger: CATCAGGATTATGTAGCTCCAGACCTTCCTTCTTGC...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGGGGTCCCCTCTGGATTaGAATGTCCTTCGAAATCTG +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQGSPLD*NVLRNL
Trigger: CAGATTTCGAAGGACATTCCAATCCAGAGGGGACCC...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGTACTGGGGTCCCCTCTaGATTGGAATGTCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQYWGPL*IGMSFE
Trigger: TTCGAAGGACATTCCAATCCAGAGGGGACCCCAGTA...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAAGCTGGAACTTGGAGTTaGGAAAGTTATCCCAACATC +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKAGTWS*ESYPNI
Trigger: GATGTTGGGATAACTTTCCCAACTCCAAGTTCCAGC...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTTACATGACAGGTCAATaGAACAATCTTCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIYMTGQ*NNLLQG
Trigger: TCCCTGGAGAAGATTGTTCCATTGACCTGTCATGTA...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTGCCTTGGAAATCAAATaGAGACTACATGCAGACTGG +
Preference number: 4 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTALEIK*RLHADW
Trigger: CCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGC...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651434.1
3UTR CAA 72 bp TTCATTTCCAAAGTTAGCCAGGGGGTATTCTCTGCCTaGGAAATCAAATGGAGACTACATGCAGACTGGAGG +
Preference number: 4 (lower is better)
Translates to: FISKVSQGVFSA*EIKWRLHADWR
Trigger: CCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCCCTGGCTAACTTTGGAAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR TCA 90 bp CAAAGATTCTTTTTCTTTAGCCTGGGCAGCCTCAGTCACTGCCCTTGTACTGTGAGGCTTCTCTGTATGTaGATAGAAAGAGGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: QRFFFFSLGSLSHCPCTVRLLCM*IERGSY
Trigger: GTAACTTCCTCTTTCTATTCACATACAGAGAAGCCT...CACAGTACAAGGGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGAATCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR TCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTTGGGCTTTCCTCTGTaGATGGCTGTCTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNLGFPL*MAVCEA
Trigger: TGCTTCACAGACAGCCATTCACAGAGGAAAGCCCAA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR TCA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCCACATGTGCAGCCAGTaGATCTACACTGCTACCACC +
Preference number: 4 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEIHMCSQ*IYTATT
Trigger: GGTGGTAGCAGTGTAGATTCACTGGCTGCACATGTG...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTTTTAGCATGATTCAGTaGGGATTCACATTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIFSMIQ*GFTLQK
Trigger: CTTCTGCAATGTGAATCCTCACTGAATCATGCTAAA...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TTCTCCCACTGGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTCTTTAGCATGATTCAGTaGGGATTCACATTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: FSHWQGCLSHYPLTVDSFFSMIQ*GFTLQK
Trigger: CTTCTGCAATGTGAATCCTCACTGAATCATGCTAAA...GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAATCAGTTGTTCTTCCATaGCCAAATAACTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKSVVLP*PNNSAL
Trigger: CAAGGCAGAGTTATTTGGTCATGGAAGAACAACTGA...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTTCAGTTGTTCTTCCATaGCCAAATAACTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTSVVLP*PNNSAL
Trigger: CAAGGCAGAGTTATTTGGTCATGGAAGAACAACTGA...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGTCCTCTGGTCATTTCTaGGGGTCCAGCAGATCTGAA +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGSSGHF*GSSRSE
Trigger: TTCAGATCTGCTGGACCCTCAGAAATGACCAGAGGA...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGCTGTTGTTATCTGAGTaGCTGCATCAGATGACAATT +
Preference number: 4 (lower is better)
Translates to: ELRHLHFHSARVFLPLARLLLSE*LHQMTI
Trigger: AATTGTCATCTGATGCAGTCACTCAGATAACAACAG...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTATGATGAGGCAAACTTaGCAGGAGCTTTGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAMMRQT*QELCVA
Trigger: AGCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCAT...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTCAACGGTGGTATCTaGTTTGGAATCCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGFNGGI*FGIRRW
Trigger: CCATCTCCGGATTCCAAATCAGATACCACCGTTGAA...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTCAACGGTGGTATCTaGTTTGGAATCCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLFNGGI*FGIRRW
Trigger: CCATCTCCGGATTCCAAATCAGATACCACCGTTGAA...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTTGTGCCTAGCACCTaGGCTGGGAAGTCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLVPST*AGKSGA
Trigger: TGCTCCAGACTTCCCAGCTCAGGTGCTAGGCACAAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp AGGGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCCGGACTCTTCAATATTaGTCTGTAGGGATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: RGYSLPWKSNGDYMQTGGRTLQY*SVGILY
Trigger: ATAAAGAATCCCTACAGATCAATATTGAAGAGTCCG...GCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR TCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCTGGGGTGACCTTCTaGTCCCTTTGTGGATCACTA +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLSGVTF*SLCGSL
Trigger: TAGTGATCCACAAAGGGATCAGAAGGTCACCCCAGA...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTGTTTGCTCTGGGGTaGCCTTCTGATCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLLFALG*PSDPFV
Trigger: CACAAAGGGATCAGAAGGTCACCCCAGAGCAAACAA...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAAACTCACAGTGTGCTaGGTTGTTTGCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAKLTVC*VVCSGV
Trigger: CACCCCAGAGCAAACAACTCAGCACACTGTGAGTTT...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATAAACTCACAGTGTGCTaGGTTGTTTGCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNKLTVC*VVCSGV
Trigger: CACCCCAGAGCAAACAACTCAGCACACTGTGAGTTT...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGCCTGGAGAGAATGTGTaGTTGGATTCTGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: ELRHLHFHSARVFLPLARPGENV*LDSEEF
Trigger: AAATTCTTCAGAATCCAATCACACATTCTCTCCAGG...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCAGCTCACTCTCCTCTaGGGGCCGACAATCCGAAGA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLQLTLL*GPTIRR
Trigger: TCTTCGGATTGTCGGCCCTCAGAGGAGAGTGAGCTG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp CAAAGATTCTTTTTCTTTAGCCTGGGCAGCCTCAGTCACTGCCCTTGTACTGTGTTTAATTCGTCTGGGTaGCAAGCATACTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: QRFFFFSLGSLSHCPCTVFNSSG*QAYSFM
Trigger: CATGAAAGAGTATGCTTGTCACCCAGACGAATTAAA...CACAGTACAAGGGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGAATCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCTTTAATTCGTCTGGGTaGCAAGCATACTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPFNSSG*QAYSFM
Trigger: CATGAAAGAGTATGCTTGTCACCCAGACGAATTAAA...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCCTATAAGCGGGTGCTaGGATACACTAAAGCGACTG +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMPISGC*DTLKRL
Trigger: CAGTCGCTTTAGTGTATCTCAGCACCCGCTTATAGG...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTGGTCCAGGAGTGGCTaGAACTTTAGTAAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGWSRSG*NFSKSL
Trigger: GAGACTCTTACTAAAGTTTCAGCCACTCCTGGACCA...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTGCCTCTTCAGTTAGATaGCTATTGGGTAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAASSVR*LLGKVC
Trigger: GCAGACCTTACCCAATAGTCATCTAACTGAAGAGGC...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATACAGTGATTTGGGGCTaGCTGGGAGACCACAGTATT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNTVIWG*LGDHSI
Trigger: AATACTGTGGTCTCCCAGTCAGCCCCAAATCACTGT...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR TCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCGGAGGTTGGTTCCAGTaGTCTCGAAGATACAGTATG +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGGGWFQ*SRRYSM
Trigger: CATACTGTATCTTCGAGATCACTGGAACCAACCTCC...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCCAGGAACCCCTATTaGTTTCAAAGTTACTTCAGT +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKPRNPY*FQSYFS
Trigger: ACTGAAGTAACTTTGAAAGCAATAGGGGTTCCTGGG...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CAAAGATTCTTTTTCTTTAGCCTGGGCAGCCTCAGTCACTGCCCTTGTACTGTGATTGCATCGTTTCAGTaGCATATTTTCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: QRFFFFSLGSLSHCPCTVIASFQ*HIFCLH
Trigger: ATGGAGGCAGAAAATATGGCACTGAAACGATGCAAT...CACAGTACAAGGGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGAATCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCATTGCATCGTTTCAGTaGCATATTTTCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPIASFQ*HIFCLH
Trigger: ATGGAGGCAGAAAATATGGCACTGAAACGATGCAAT...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCATATTCCAGGCATGTaGTCGTACCCGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHHIPGM*SYPAFL
Trigger: GAGGAAAGCCGGGTACGAGCACATGCCTGGAATATG...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTCATATTCCAGGCATGTaGTCGTACCCGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFHIPGM*SYPAFL
Trigger: GAGGAAAGCCGGGTACGAGCACATGCCTGGAATATG...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGATACAGCTTCTGGCTTaGATCCCATTCCCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQIQLLA*IPFPVD
Trigger: GTCCACGGGGAATGGGATGCAAGCCAGAAGCTGTAT...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATATACAGCTTCTGGCTTaGATCCCATTCCCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANIQLLA*IPFPVD
Trigger: GTCCACGGGGAATGGGATGCAAGCCAGAAGCTGTAT...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGGGTCATCATCTCTTGTaGCTAGCACCTGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQGHHLL*LAPELG
Trigger: TCCCAGCTCAGGTGCTAGGCACAAGAGATGATGACC...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTCCCACTGGCAAGGATaGCTTAGTCACTACCCTCTT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNSHWQG*LSHYPL
Trigger: AAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR GCA 90 bp TTGGTACTACCAGAAGGCTTATATGGCAATAATAAAGGCTGGCCATCTGTGCCGAGCAGCACTGGAATCTaGAGTATCTTTCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LVLPEGLYGNNKGWPSVPSSTGI*SIFLQR
Trigger: TCTTTGCAGAAAGATACTGCAGATTCCAGTGCTGCT...CGGCACAGATGGCCAGCCTTTATTATTGCCATATAAGCCTTCTGGTAGTACCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAAAGCAGCACTGGAATCTaGAGTATCTTTCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKSSTGI*SIFLQR
Trigger: TCTTTGCAGAAAGATACTGCAGATTCCAGTGCTGCT...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATGAGCTACTCCTTTCGTaGAGAGCCACCTCTCTATCT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNELLLS*RATSLS
Trigger: AGATAGAGAGGTGGCTCTGCACGAAAGGAGTAGCTC...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR GCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCATGTCTCCTTCTGGTGTaGTCAGAAGTCACTAGGGGA +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERACLLLV*SEVTRG
Trigger: TCCCCTAGTGACTTCTGAGCACACCAGAAGGAGACA...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTGTCTCCTTCTGGTGTaGTCAGAAGTCACTAGGGGA +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNCLLLV*SEVTRG
Trigger: TCCCCTAGTGACTTCTGAGCACACCAGAAGGAGACA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR GCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTGCTCGGTCTGTAACATaGTCTGCAGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSARSVT*SAASSP
Trigger: AGGAGAGGAAGCTGCAGAGCATGTTACAGACCGAGC...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR GCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTCCTGTGTCCAATACTaGCCATATGAACGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLSCVQY*PYERAA
Trigger: TGCTGCTCGTTCATATGGGCAGTATTGGACACAGGA...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTCTGCACGTGGGGCTTTaGTTTGTTCAAAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACLHVGL*FVQRAL
Trigger: GAGAGCTCTTTGAACAAAGCAAAGCCCCACGTGCAG...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TTCTCCCACTGGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTCGGAAACTCAGTTTTCTaGTCATCTGGTATATGCACA +
Preference number: 4 (lower is better)
Translates to: FSHWQGCLSHYPLTVDSFGNSVF*SSGICT
Trigger: TGTGCATATACCAGATGACCAGAAAACTGAGTTTCC...GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CCA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAGGAAACTCAGTTTTCTaGTCATCTGGTATATGCACA +
Preference number: 4 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGGNSVF*SSGICT
Trigger: TGTGCATATACCAGATGACCAGAAAACTGAGTTTCC...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCGACAAAAAGCTGTCTGGGATaGAGTCTTCTGGTCATTTGG +
Preference number: 4 (lower is better)
Translates to: LSCRATSLSVWVNISDSTKSCLG*SLLVIW
Trigger: CCAAATGACCAGAAGACTCCATCCCAGACAGCTTTT...TGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CCA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAAACCATTTCCATCACTaGCATCACTACTTGAATCAC +
Preference number: 4 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGNHFHH*HHYLNH
Trigger: GTGATTCAAGTAGTGATGCCAGTGATGGAAATGGTT...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAAAACCATTTCCATCACTaGCATCACTACTTGAATCAC +
Preference number: 4 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQNHFHH*HHYLNH
Trigger: GTGATTCAAGTAGTGATGCCAGTGATGGAAATGGTT...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATGACTCTGTAAACCCTTaGACAAGTCAGTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNDSVNP*TSQLFF
Trigger: GAAGAACAACTGACTTGTCCAAGGGTTTACAGAGTC...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGGGCAATAATAAAGGCTaGCCATCTGTGCCGCGAGAA +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMGNNKG*PSVPRE
Trigger: TTCTCGCGGCACAGATGGCCAGCCTTTATTATTGCC...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGGGCAATAATAAAGGCTaGCCATCTGTGCCGCGAGAA +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGGNNKG*PSVPRE
Trigger: TTCTCGCGGCACAGATGGCCAGCCTTTATTATTGCC...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCGGCAATAATAAAGGCTaGCCATCTGTGCCGCGAGAA +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLGNNKG*PSVPRE
Trigger: TTCTCGCGGCACAGATGGCCAGCCTTTATTATTGCC...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGCGGTGGTATCTGATTTaGAATCCGGAGATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLRWYLI*NPEMEE
Trigger: TTCCTCCATCTCCGGATTCCAAATCAGATACCACCG...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCGACAGAGCAATGGCATCATTaGATCCTGAATGGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LSCRATSLSVWVNISDSTEQWHH*ILNGSF
Trigger: AAAGCTCCCATTCAGGATCCAATGATGCCATTGCTC...TGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAATCTTTTTCTTTAGCCTaGGCAGCCTCAGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQSFSLA*AASVTA
Trigger: GGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGA...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCTTTTTCTTTAGCCTaGGCAGCCTCAGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLSFSLA*AASVTA
Trigger: GGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGA...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTCAGCAGCAGCAGCACTaGAATCTGCAGTATCTTTCT +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAQQQQH*NLQYLS
Trigger: AGAAAGATACTGCAGATTCCAGTGCTGCTGCTGCTG...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGGGATTCTTTATTGTTTaGCCAGGCTTCCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQGFFIV*PGFLGN
Trigger: GTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCC...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGGGATTCTTTATTGTTTaGCCAGGCTTCCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLGFFIV*PGFLGN
Trigger: GTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCC...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCTGAGTTGTTTGCTCTaGGGTGACCTTCTGATCCCT +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMLSCLL*GDLLIP
Trigger: AGGGATCAGAAGGTCACCCCAGAGCAAACAACTCAG...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAACTGAGTTGTTTGCTCTaGGGTGACCTTCTGATCCCT +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQLSCLL*GDLLIP
Trigger: AGGGATCAGAAGGTCACCCCAGAGCAAACAACTCAG...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCCTGAGTTGTTTGCTCTaGGGTGACCTTCTGATCCCT +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLLSCLL*GDLLIP
Trigger: AGGGATCAGAAGGTCACCCCAGAGCAAACAACTCAG...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTCTGAGTTGTTTGCTCTaGGGTGACCTTCTGATCCCT +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSLSCLL*GDLLIP
Trigger: AGGGATCAGAAGGTCACCCCAGAGCAAACAACTCAG...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATGCTCCCTCCAGGGTCTaGTCTTGGTTATTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNAPSRV*SWLLVQ
Trigger: TTGAACCAATAACCAAGACCAGACCCTGGAGGGAGC...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCAGGAAGACTCTCTTaGGCAGCGGGCACATGCGAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPGRLS*AAGTCD
Trigger: ATCGCATGTGCCCGCTGCCCAAGAGAGTCTTCCTGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTCGAGCAGCATCAAAATaGTCACTTCTTTTAGTAGCT +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIRAASK*SLLLVA
Trigger: AGCTACTAAAAGAAGTGACCATTTTGATGCTGCTCG...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTCCCCTGCAGGCCCTTaGTTAAATATGTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMASPAGP*LNMFLP
Trigger: AGGCAGAAACATATTTAACCAAGGGCCTGCAGGGGA...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCCTCTTCGGGTAGATaGCTGTCCAGCAAGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLASSGR*LSSKAC
Trigger: ACAGGCCTTGCTGGACAGCCATCTACCCGAAGAGGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTAGGGAAAAGAAAGTCTaGCAGGGTCTGCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAREKKV*QGLLGK
Trigger: TTTTCCCAGCAGACCCTGCCAGACTTTCTTTTCCCT...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAGTAGACGGTACTGCTaGTGTGTCAGTCATCTGGTC +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERASRRYC*CVSHLV
Trigger: GACCAGATGACTGACACACCAGCAGTACCGTCTACT...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGAGGTATATGAGTACCTaGCAAGGCCTGCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMRYMST*QGLLVE
Trigger: TTCCACCAGCAGGCCTTGCCAGGTACTCATATACCT...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGTCTCTCCAAATGAGCTaGAAGGGGAGGTTACAGTTG +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQSLQMS*KGRLQL
Trigger: CAACTGTAACCTCCCCTTCCAGCTCATTTGGAGAGA...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTCTCTCCAAATGAGCTaGAAGGGGAGGTTACAGTTG +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMASLQMS*KGRLQL
Trigger: CAACTGTAACCTCCCCTTCCAGCTCATTTGGAGAGA...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGCTACAATTTGCCCTaGTACTGGGCTCAGAATGAC +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMACYNLP*YWAQND
Trigger: GTCATTCTGAGCCCAGTACCAGGGCAAATTGTAGCA...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGTGTTTACTCCTAGGGTaGAACTTGGTCTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMCLLLG*NLVCPC
Trigger: GCATGGGCAGACCAAGTTCCACCCTAGGAGTAAACA...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCCTTTTACTCCTAGTCTaGAACTCGATCTGTTTACTC +
Preference number: 4 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPLLLLV*NSICLL
Trigger: GAGTAAACAGATCGAGTTCCAGACTAGGAGTAAAAG...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCTACTGGTCAATAATTTaGAGGTTGGTTCCAGTGATC +
Preference number: 4 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPYWSII*RLVPVI
Trigger: GATCACTGGAACCAACCTCCAAATTATTGACCAGTA...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTTCACTTGTATTTGCCTaGAGGTTACTATCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTISLVFA*RLLSGY
Trigger: ATAGCCAGATAGTAACCTCCAGGCAAATACAAGTGA...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAGGGTCCCCTCTGGATTaGAATGTCCTTCGAAATCTG +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAGSPLD*NVLRNL
Trigger: CAGATTTCGAAGGACATTCCAATCCAGAGGGGACCC...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGGGTCCCCTCTGGATTaGAATGTCCTTCGAAATCTG +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSGSPLD*NVLRNL
Trigger: CAGATTTCGAAGGACATTCCAATCCAGAGGGGACCC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCATACTGGGGTCCCCTCTaGATTGGAATGTCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAYWGPL*IGMSFE
Trigger: TTCGAAGGACATTCCAATCCAGAGGGGACCCCAGTA...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTACTGGGGTCCCCTCTaGATTGGAATGTCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNYWGPL*IGMSFE
Trigger: TTCGAAGGACATTCCAATCCAGAGGGGACCCCAGTA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTCGATCTGCAAATACTaGGGTCCCCTCTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACSICKY*GPLWIG
Trigger: TCCAATCCAGAGGGGACCCCAGTATTTGCAGATCGA...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTCGATCTGCAAATACTaGGGTCCCCTCTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNSICKY*GPLWIG
Trigger: TCCAATCCAGAGGGGACCCCAGTATTTGCAGATCGA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATAGCCTCGCTGGAACTTaGAGTTGGGAAAGTTATCCC +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNSLAGT*SWESYP
Trigger: GGGATAACTTTCCCAACTCCAAGTTCCAGCGAGGCT...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
3UTR CAA 72 bp TCGGACTCTTCAATATTGATCTGTAGGGATTCTTTATaGTTTGGCCAGGCTTCCTCGGGAACTGTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SDSSILICRDSL*FGQASSGTVFF
Trigger: GAAGAAGACAGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGAAGAGTCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATAGGCTTCTCTGTATGTaGATAGAAAGAGGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNRLLCM*IERGSY
Trigger: GTAACTTCCTCTTTCTATTCACATACAGAGAAGCCT...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGTCTGGCAACTCCTGTTaGGAGATAACACTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERSGNSC*EITLGF
Trigger: GAAGCCCAGTGTTATCTCTCAACAGGAGTTGCCAGA...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACTCTGGCAACTCCTGTTaGGAGATAACACTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHSGNSC*EITLGF
Trigger: GAAGCCCAGTGTTATCTCTCAACAGGAGTTGCCAGA...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAGGGCTTCTCTATTTGTaGGTAGGAACTAAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQGLLYL*VGTKGS
Trigger: GCTACCCTTAGTTCCTACTCACAAATAGAGAAGCCC...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGTGGTCCAGGAATTGTTaGAACCTTCAGCACATCTTC +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQWSRNC*NLQHIF
Trigger: GAAGATGTGCTGAAGGTTTCAACAATTCCTGGACCA...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTATTGGGCTTTCCTCTGTaGATGGCTGTCTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: IGQGHYAESIAPKPLGILLGFPL*MAVCEA
Trigger: TGCTTCACAGACAGCCATTCACAGAGGAAAGCCCAA...TAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTACAGATTTGGCTGCTTaGTATTGCCTAAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTTDLAA*YCLRVS
Trigger: AGAAACTCTTAGGCAATATCAAGCAGCCAAATCTGT...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp TTGGTACTACCAGAAGGCTTATATGGCAATAATAAAGGCTGGCCATCTGTGCCGTTTAGCATGATTCAGTaGGGATTCACATTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LVLPEGLYGNNKGWPSVPFSMIQ*GFTLQK
Trigger: CTTCTGCAATGTGAATCCTCACTGAATCATGCTAAA...CGGCACAGATGGCCAGCCTTTATTATTGCCATATAAGCCTTCTGGTAGTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATAGTGACTGCATCAGATaGCAATTTTTCAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNSDCIR*QFFRES
Trigger: GCTTTCTCTGAAAAATTGTCATCTGATGCAGTCACT...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTATGATGAGGCAAACTTaGCAGGAGCTTTGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACMMRQT*QELCVA
Trigger: AGCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCAT...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATATGATGAGGCAAACTTaGCAGGAGCTTTGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNMMRQT*QELCVA
Trigger: AGCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCAT...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR TCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTTCAACGGTGGTATCTaGTTTGGAATCCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNFNGGI*FGIRRW
Trigger: CCATCTCCGGATTCCAAATCAGATACCACCGTTGAA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR TCA 90 bp ACCAGGCTCTATAATTTCATGTCCACGATCTTCAGCATTAATAAAAATCTCAGATCTGGGTCTCCTACTTaGGCTGAGTGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TRLYNFMSTIFSINKNLRSGSPT*AECSAA
Trigger: TGCTGCAGAGCACTCAGCTCAAGTAGGAGACCCAGA...TCTGAGATTTTTATTAATGCTGAAGATCGTGGACATGAAATTATAGAGCCTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCTGGGTCTCCTACTTaGGCTGAGTGCTCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSGSPT*AECSAA
Trigger: TGCTGCAGAGCACTCAGCTCAAGTAGGAGACCCAGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAACGGACTCTTCAATATTaGTCTGTAGGGATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQRTLQY*SVGILY
Trigger: ATAAAGAATCCCTACAGATCAATATTGAAGAGTCCG...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTTCTGGGGTGACCTTCTaGTCCCTTTGTGGATCACTA +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFSGVTF*SLCGSL
Trigger: TAGTGATCCACAAAGGGATCAGAAGGTCACCCCAGA...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACTTGTTTGCTCTGGGGTaGCCTTCTGATCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHLFALG*PSDPFV
Trigger: CACAAAGGGATCAGAAGGTCACCCCAGAGCAAACAA...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTAAACTCACAGTGTGCTaGGTTGTTTGCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTKLTVC*VVCSGV
Trigger: CACCCCAGAGCAAACAACTCAGCACACTGTGAGTTT...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACAAACTCACAGTGTGCTaGGTTGTTTGCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHKLTVC*VVCSGV
Trigger: CACCCCAGAGCAAACAACTCAGCACACTGTGAGTTT...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGATGTGTGATTGGATTCTaGAGAATTTTAGCCAAACGA +
Preference number: 4 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGCVIGF*RILAKR
Trigger: TCGTTTGGCTAAAATTCTTCAGAATCCAATCACACA...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCTGGAGAGAATGTGTaGTTGGATTCTGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKPGENV*LDSEEF
Trigger: AAATTCTTCAGAATCCAATCACACATTCTCTCCAGG...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TTGGTACTACCAGAAGGCTTATATGGCAATAATAAAGGCTGGCCATCTGTGCCGTTGGGTCAATATATCTaGTTCGACAGTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LVLPEGLYGNNKGWPSVPLGQYI*FDSRSG
Trigger: ACCACTTCTACTGTCGAATCAGATATATTGACCCAA...CGGCACAGATGGCCAGCCTTTATTATTGCCATATAAGCCTTCTGGTAGTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAGAAGTCACTAGGGGATaGCCTGTATTCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAEVTRG*PVFSTF
Trigger: GAAAGTGCTGAATACAGGTCATCCCCTAGTGACTTC...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATGAAGTCACTAGGGGATaGCCTGTATTCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNEVTRG*PVFSTF
Trigger: GAAAGTGCTGAATACAGGTCATCCCCTAGTGACTTC...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGAAGTCACTAGGGGATaGCCTGTATTCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSEVTRG*PVFSTF
Trigger: GAAAGTGCTGAATACAGGTCATCCCCTAGTGACTTC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTCCTATAAGCGGGTGCTaGGATACACTAAAGCGACTG +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFPISGC*DTLKRL
Trigger: CAGTCGCTTTAGTGTATCTCAGCACCCGCTTATAGG...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTAGTGGTAGTGATGCCTaGCTTCAAGTTGGATTGAGT +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMASGSDA*LQVGLS
Trigger: ACTCAATCCAACTTGAAGTCAGGCATCACTACCACT...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGGCTTCCCCCTATGTaGGTGGGAACTAGAGAGTAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGLPPM*VGTREY
Trigger: GTACTCTCTAGTTCCCACTCACATAGGGGGAAGCCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGTGGTCCAGTAACAGCTaGAACTTTCTGAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGWSSNS*NFLSLF
Trigger: GAAGAGGCTCAGAAAGTTTCAGCTGTTACTGGACCA...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGTGGTCCAAGAACAGGTaGAACTTTCTGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGWSKNR*NFLCLF
Trigger: GAAGAGGCACAGAAAGTTTCACCTGTTCTTGGACCA...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp ATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAACAGTGATTTGGGGCTaGCTGGGAGACCACAGTATT +
Preference number: 4 (lower is better)
Translates to: IGQGHYAESIAPKPLGILTVIWG*LGDHSI
Trigger: AATACTGTGGTCTCCCAGTCAGCCCCAAATCACTGT...TAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTACAGTGATTTGGGGCTaGCTGGGAGACCACAGTATT +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFTVIWG*LGDHSI
Trigger: AATACTGTGGTCTCCCAGTCAGCCCCAAATCACTGT...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAAACTATCTGGCTATTCTaGGAAGGTATGGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKTIWLF*EGMVFK
Trigger: CTTGAAAACCATACCTTCTCAGAATAGCCAGATAGT...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp TTCTCCCACTGGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTCTGGTCATCTGGTATATaGACAGTTGAAATCTTGAGT +
Preference number: 4 (lower is better)
Translates to: FSHWQGCLSHYPLTVDSFWSSGI*TVEILS
Trigger: ACTCAAGATTTCAACTGTGCATATACCAGATGACCA...GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR GCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGCAGTGCCATATTTTCTaGCTCCATCAAAAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLQCHIF*LHQKCP
Trigger: CGGACACTTTTGATGGAGGCAGAAAATATGGCACTG...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTGGGGAGCAGGAAAATTaGATCGTTTCAGTGCCATAT +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAGEQEN*IVSVPY
Trigger: ATATGGCACTGAAACGATGCAATTTTCCTGCTCCCC...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGCAATATCCTTCTGTATaGACCTGCTGCTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQQYPSV*TCCLGF
Trigger: AAAGCCCAAGCAGCAGGTGCATACAGAAGGATATTG...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTCATTACAGATTTGGCTaGTTGATATTGCCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIHYRFG*LILPKS
Trigger: ACTCTTAGGCAATATCAAGCAGCCAAATCTGTAATG...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CAAAGATTCTTTTTCTTTAGCCTGGGCAGCCTCAGTCACTGCCCTTGTACTGTGAGTGAGGATTCACATTaGAGAAGGTTTTTCACATGT +
Preference number: 4 (lower is better)
Translates to: QRFFFFSLGSLSHCPCTVSEDSH*RRFFTC
Trigger: ACATGTGAAAAACCTTCTGCAATGTGAATCCTCACT...CACAGTACAAGGGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGAATCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAAGCTTTCCTCTTCCTCTaGATTTCTGAGTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQAFLFL*ISEYFF
Trigger: AAAGAAATACTCAGAAATGCAGAGGAAGAGGAAAGC...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCACATGATGATGGGTTCTaGCGTCCTCTGGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAHDDGF*RPLVIS
Trigger: AGAAATGACCAGAGGACGGCAGAACCCATCATCATG...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGGCAGAAAGGTTGACATaGTTGGCTCTGCATGATGAT +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQAERLT*LALHDD
Trigger: ATCATCATGCAGAGCCAAGCATGTCAACCTTTCTGC...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTGCAGAAAGGTTGACATaGTTGGCTCTGCATGATGAT +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAAERLT*LALHDD
Trigger: ATCATCATGCAGAGCCAAGCATGTCAACCTTTCTGC...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCAGGCTGTCTCTGTTaGCTCTGTCGCTCCCGATAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSGCLC*LCRSRY
Trigger: GTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTGAGCTACTCCTTTCGTaGAGAGCCACCTCTCTATCT +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSELLLS*RATSLS
Trigger: AGATAGAGAGGTGGCTCTGCACGAAAGGAGTAGCTC...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR GCA 90 bp CTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCGACATATTCAGCACTTTCTTaGTGTGTTTGCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LSCRATSLSVWVNISDSTYSALS*CVCSAS
Trigger: AGAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATA...TGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAGACTCAACCTTCCCCTaGAGGCCCTTGGTTAAATAT +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERADSTFP*RPLVKY
Trigger: ATATTTAACCAAGGGCCTGCAGGGGAAGGTTGAGTC...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAGAAAGTAGACGGTACTaGTGGTGTGTCAGTCATCTG +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQESRRY*WCVSHL
Trigger: CAGATGACTGACACACCAGCAGTACCGTCTACTTTC...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCCTATGCAGAAAGTATTaGTCCCAAACCATTAGGAAT +
Preference number: 4 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPLCRKY*SQTIRN
Trigger: ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAG...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTAGAGTGCTCTCTCTGTaGGTAGGAATTAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTRVLSL*VGIRGQ
Trigger: CTGCCCTCTAATTCCTACCCACAGAGAGAGCACTCT...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTGTGAGATGACTGTCTaGCAACTCCTGTTGAGAGAT +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLCEMTV*QLLLRD
Trigger: ATCTCTCAACAGGAGTTGCCAGACAGTCATCTCACA...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGGGATGGAGTCTTCTaGTCATTTGGTCCAATCACA +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAWDGVF*SFGPIT
Trigger: TGTGATTGGACCAAATGACCAGAAGACTCCATCCCA...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAACCTGGCAATTCCTGTaGACTGAAAATATTCGATTT +
Preference number: 4 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGTWQFL*TENIRF
Trigger: AAATCGAATATTTTCAGTCCACAGGAATTGCCAGGT...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGTTCTGCCGTCCTCTaGTCATTTCTGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGSAVL*SFLRVQ
Trigger: CTGGACCCTCAGAAATGACCAGAGGACGGCAGAACC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAGGTTCTGCCGTCCTCTaGTCATTTCTGAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLGSAVL*SFLRVQ
Trigger: CTGGACCCTCAGAAATGACCAGAGGACGGCAGAACC...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGGGAGCTTTCAACGGTaGTATCTGATTTGGAATCCG +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSGSFQR*YLIWNP
Trigger: CGGATTCCAAATCAGATACCACCGTTGAAAGCTCCC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp CACATTGATGCTGAGGCTCTTTATTCTGGTATAATCTGTCTTAGTCTTGTCCATCTGAGCTGGGAAGTCTaGAGCAATGGCATCATTGGA +
Preference number: 4 (lower is better)
Translates to: HIDAEALYSGIICLSLVHLSWEV*SNGIIG
Trigger: TCCAATGATGCCATTGCTCCAGACTTCCCAGCTCAG...ATGGACAAGACTAAGACAGATTATACCAGAATAAAGAGCCTCAGCATCAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGCTGAGCTGGGAAGTCTaGAGCAATGGCATCATTGGA +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERLSWEV*SNGIIG
Trigger: TCCAATGATGCCATTGCTCCAGACTTCCCAGCTCAG...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCTGAGCTGGGAAGTCTaGAGCAATGGCATCATTGGA +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSLSWEV*SNGIIG
Trigger: TCCAATGATGCCATTGCTCCAGACTTCCCAGCTCAG...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTGGGTTTTTCTCCCACTaGCAAGGATGCCTTAGTCAC +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSGFFSH*QGCLSH
Trigger: GTGACTAAGGCATCCTTGCCAGTGGGAGAAAAACCC...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTTCTTTTTCTTTAGCCTaGGCAGCCTCAGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFSFSLA*AASVTA
Trigger: GGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGA...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCCAGCAGCAGCAGCACTaGAATCTGCAGTATCTTTCT +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLQQQQH*NLQYLS
Trigger: AGAAAGATACTGCAGATTCCAGTGCTGCTGCTGCTG...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCGGATTCTTTATTGTTTaGCCAGGCTTCCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLGFFIV*PGFLGN
Trigger: GTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCC...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCCTGAGTTGTTTGCTCTaGGGTGACCTTCTGATCCCT +
Preference number: 4 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEILSCLL*GDLLIP
Trigger: AGGGATCAGAAGGTCACCCCAGAGCAAACAACTCAG...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp GGGCTTAGAGGTATTAACCCTCTCATTTTACAGGTAAATTGGCCAAAAGTGCTTCTCTTTTTATATAGCTaGGCTCGCAGCCGGTATGAC +
Preference number: 4 (lower is better)
Translates to: GLRGINPLILQVNWPKVLLFLYS*ARSRYD
Trigger: GTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG...AAGCACTTTTGGCCAATTTACCTGTAAAATGAGAGGGTTAATACCTCTAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATCTCTTTTTATATAGCTaGGCTCGCAGCCGGTATGAC +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNLFLYS*ARSRYD
Trigger: GTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCATGTTTAGGAGCCTTTaGCACAGTGTCAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGMFRSL*HSVRRH
Trigger: ATGTCTCCTGACACTGTGCCAAAGGCTCCTAAACAT...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGGCTGATAGAAAGCACTaGGCTTTTCTCCAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQADRKH*AFLQVK
Trigger: CTTCACTTGGAGAAAAGCCCAGTGCTTTCTATCAGC...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTGTTGGGACAGTCTTCTaGTCAGTCAGTCCAGGAATA +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACVGTVF*SVSPGI
Trigger: TATTCCTGGACTGACTGACCAGAAGACTGTCCCAAC...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAAAGTTGCATAACTATCTaGCCACTCCTGTTGATAGAA +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKSCITI*PLLLIE
Trigger: TTCTATCAACAGGAGTGGCCAGATAGTTATGCAACT...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTGATGCTCCAGTACACTaGCTACCTTCAGTAACACCA +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACDAPVH*LPSVTP
Trigger: TGGTGTTACTGAAGGTAGCCAGTGTACTGGAGCATC...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCACATGGTTTGCTACCTaGATGTGTCTCCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLTWFAT*MCLLLV
Trigger: CACCAGAAGGAGACACATCCAGGTAGCAAACCATGT...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000651750.1
CDS-3UTR CCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTTTGCTGCCTTGTATCTaGATGTGTCTCCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSLLPCI*MCLLLV
Trigger: CACCAGAAGGAGACACATCCAGATACAAGGCAGCAA...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652487.1
3UTR CAA 72 bp TGTTTGCTCCGCTTCTCAAGGTATCTCCTCTGTTGGTaGGTGATGCTGCTATATAATTTAATTCGTCTGGGT +
Preference number: 4 (lower is better)
Translates to: CLLRFSRYLLCW*VMLLYNLIRLG
Trigger: ACCCAGACGAATTAAATTATATAGCAGCATCACCAACCAACAGAGGAGATACCTTGAGAAGCGGAGCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTGGTTTCTCTCGATGTaGAAAGGAACTAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACWFLSM*KGTRKS
Trigger: GCTCTTCCTAGTTCCTTTTCACATCGAGAGAAACCA...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGGTGATTCTCACCATGTaGGTAAGTACCAGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQVILTM*VSTRGN
Trigger: GTTCCCTCTGGTACTTACTCACATGGTGAGAATCAC...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTGTGATTCTCACCATGTaGGTAAGTACCAGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFVILTM*VSTRGN
Trigger: GTTCCCTCTGGTACTTACTCACATGGTGAGAATCAC...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATACTCTGTCATCAGCCTaGGAATTTAAAAGCACATTA +
Preference number: 4 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNTLSSA*EFKSTL
Trigger: TAATGTGCTTTTAAATTCTCAGGCTGATGACAGAGT...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TTGGTACTACCAGAAGGCTTATATGGCAATAATAAAGGCTGGCCATCTGTGCCGACTGGCATCACTACTTaGATCACTTTTTATGACAGT +
Preference number: 4 (lower is better)
Translates to: LVLPEGLYGNNKGWPSVPTGITT*ITFYDS
Trigger: ACTGTCATAAAAAGTGATTCAAGTAGTGATGCCAGT...CGGCACAGATGGCCAGCCTTTATTATTGCCATATAAGCCTTCTGGTAGTACCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCACATGTGCAGCCAGTaGATCTACACTGCTACCACC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLHMCSQ*IYTATT
Trigger: GGTGGTAGCAGTGTAGATTCACTGGCTGCACATGTG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCCAAATAACTCTGCCTTaGTCTCTTCTACTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGQITLP*SLLLSS
Trigger: GGAGGAAAGTAGAAGAGATCAAGGCAGAGTTATTTG...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCAGAATGTCGGTGAGATaGAAAAGTGATGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGRMSVR*KSDGGS
Trigger: ACTACCTCCATCACTTTTTCATCTCACCGACATTCT...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAACCAGTGATTAGCACTTaGACTGAGGCATCTGCATTT +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQPVIST*TEASAF
Trigger: AAATGCAGATGCCTCAGTTCAAGTGCTAATCACTGG...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCCCAGTGATTAGCACTTaGACTGAGGCATCTGCATTT +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLPVIST*TEASAF
Trigger: AAATGCAGATGCCTCAGTTCAAGTGCTAATCACTGG...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR TCA 90 bp CACTCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGTCATGGCAAATATCTTaGTCACTTGGTAGGTGTACG +
Preference number: 4 (lower is better)
Translates to: HSFPKIHGKYLDHLVGVRSWQIS*SLGRCT
Trigger: CGTACACCTACCAAGTGATCAAGATATTTGCCATGA...CCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAATCTGGGGTGACCTTCTaGTCCCTTTGTGGATCACTA +
Preference number: 4 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKSGVTF*SLCGSL
Trigger: TAGTGATCCACAAAGGGATCAGAAGGTCACCCCAGA...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCGACACCTGGAGAGAATGTGTaGTTGGATTCTGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: LSCRATSLSVWVNISDSTPGENV*LDSEEF
Trigger: AAATTCTTCAGAATCCAATCACACATTCTCTCCAGG...TGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTATCATGTGTACTTTCTaGGACCTGGAGAGAATGTGT +
Preference number: 4 (lower is better)
Translates to: SILICRDSLLFGQASSGTIMCTF*DLERMC
Trigger: ACACATTCTCTCCAGGTCTCAGAAAGTACACATGAT...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGATCATGTGTACTTTCTaGGACCTGGAGAGAATGTGT +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLIMCTF*DLERMC
Trigger: ACACATTCTCTCCAGGTCTCAGAAAGTACACATGAT...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTGTTCAATTTTAATTTaGTTAGACCTCCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNCSILI*LDLPAR
Trigger: TCGAGCTGGGAGGTCTAATCAAATTAAAATTGAACA...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCATGGCCAAAAGCTTaGATCAGCCGGGCAGTGTCA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSWPKA*ISRAVS
Trigger: TGACACTGCCCGGCTGATTCAAGCTTTTGGCCATGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp CTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCGACATTTAATTCGTCTGGGTaGCAAGCATACTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: LSCRATSLSVWVNISDSTFNSSG*QAYSFM
Trigger: CATGAAAGAGTATGCTTGTCACCCAGACGAATTAAA...TGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTCTGCCTGCTTAGATaGATCTTCCTGTGTCCAATA +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLFCLLR*IFLCPI
Trigger: TATTGGACACAGGAAGATTCATCTAAGCAGGCAGAA...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGAGTGGTAGTGATGCCTaGCTTCAAGTTGGATTGAGT +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMSGSDA*LQVGLS
Trigger: ACTCAATCCAACTTGAAGTCAGGCATCACTACCACT...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGAACTTACAGCCAACTaGGACAGGTCCTCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLELTAN*DRSSRD
Trigger: GTCCCTTGAGGACCTGTCTCAGTTGGCTGTAAGTTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAAGTCTCTTCAGTTAGATaGGTATCTGCTAATGTCTTT +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKVSSVR*VSANVF
Trigger: AAAGACATTAGCAGATACTCATCTAACTGAAGAGAC...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGGCTTTTCTCCAAGTaGAGAGGACGCAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGLFSK*RGRRGS
Trigger: ACTTCCTCTGCGTCCTCTTCACTTGGAGAAAAGCCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACGCCTCTTCAGTTAGATaGCTATTGGGTAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHASSVR*LLGKVC
Trigger: GCAGACCTTACCCAATAGTCATCTAACTGAAGAGGC...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCCTCTTTAGGCAGATaGCTCTCTGGCAAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLASLGR*LSGKVC
Trigger: ACAGACCTTGCCAGAGAGTCATCTGCCTAAAGAGGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTATGGTCCAAGAACAGGTaGAACTTTCTGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IGQGHYAESIAPKPLGILWSKNR*NFLCLF
Trigger: GAAGAGGCACAGAAAGTTTCACCTGTTCTTGGACCA...TAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAGAGCAGAAGAAACTCTaGGAGCCTCTTCAGGTATTT +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAEQKKL*EPLQVF
Trigger: AAATACCTGAAGAGGCTCTCAGAGTTTCTTCTGCTC...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTGTTCTTCAGTGAAATaGGAATTAAATACCCCCACA +
Preference number: 4 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNCSSVK*ELNTPT
Trigger: TGTGGGGGTATTTAATTCTCATTTCACTGAAGAACA...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGGAGACGGAAGGTCTaGAGCTATAGAATCCTGACC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGRRKV*SYRILT
Trigger: GGTCAGGATTCTATAGCTTCAGACCTTCCGTCTCCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGGGGAGACGGAAGGTCTaGAGCTATAGAATCCTGACC +
Preference number: 4 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILGRRKV*SYRILT
Trigger: GGTCAGGATTCTATAGCTTCAGACCTTCCGTCTCCC...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCTGCTAATGTACAGTaGTTTGGGGCTGACTGGGAG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLAANVQ*FGADWE
Trigger: CTCCCAGTCAGCCCCAAATCACTGTACATTAGCAGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAGGAGGTTGGTTCCAGTaGTCTCGAAGATACAGTATG +
Preference number: 4 (lower is better)
Translates to: IGQGHYAESIAPKPLGILGGWFQ*SRRYSM
Trigger: CATACTGTATCTTCGAGATCACTGGAACCAACCTCC...TAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTGGAGGTTGGTTCCAGTaGTCTCGAAGATACAGTATG +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSGGWFQ*SRRYSM
Trigger: CATACTGTATCTTCGAGATCACTGGAACCAACCTCC...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR GCA 90 bp TGGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTTGTCCATTATGTTTTGGCCCAGGAACCCCTATTaGTTTCAAAGTTACTTCAGT +
Preference number: 4 (lower is better)
Translates to: WGDLLIPLWITNLSIMFWPRNPY*FQSYFS
Trigger: ACTGAAGTAACTTTGAAAGCAATAGGGGTTCCTGGG...CCAAAACATAATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR GCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTGGAACTAAGGGTAGCTaGTGGAAACTCAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACGTKGS*WKLSFL
Trigger: CAGAAAACTGAGTTTCCAGCAGCTACCCTTAGTTCC...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTCAGTGCCATATTTTCTaGCTCCATCAAAAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACQCHIF*LHQKCP
Trigger: CGGACACTTTTGATGGAGGCAGAAAATATGGCACTG...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGGGGGAGCAGGAAAATTaGATCGTTTCAGTGCCATAT +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGGEQEN*IVSVPY
Trigger: ATATGGCACTGAAACGATGCAATTTTCCTGCTCCCC...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCTTCTGTATGCACCTaGTGCTTGGGCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPSVCT*CLGFPL
Trigger: CAGAGGAAAGCCCAAGCAGCAGGTGCATACAGAAGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACCAGGCTCTATAATTTCATGTCCACGATCTTCAGCATTAATAAAAATCTCAGACCTTCTGTATGCACCTaGTGCTTGGGCTTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: TRLYNFMSTIFSINKNLRPSVCT*CLGFPL
Trigger: CAGAGGAAAGCCCAAGCAGCAGGTGCATACAGAAGG...TCTGAGATTTTTATTAATGCTGAAGATCGTGGACATGAAATTATAGAGCCTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp TTGGTACTACCAGAAGGCTTATATGGCAATAATAAAGGCTGGCCATCTGTGCCGCATTACAGATTTGGCTaGTTGATATTGCCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: LVLPEGLYGNNKGWPSVPHYRFG*LILPKS
Trigger: ACTCTTAGGCAATATCAAGCAGCCAAATCTGTAATG...CGGCACAGATGGCCAGCCTTTATTATTGCCATATAAGCCTTCTGGTAGTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCCACCCTCTTCCTCCCTaGTATCTGTTATACTTGTCT +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLHPLPP*YLLYLS
Trigger: AGACAAGTATAACAGATAGCAGGGAGGAAGAGGGTG...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR GCA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAAAGTGAGGATTCACATTaGAGAAGGTTTTTCACATGT +
Preference number: 4 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKSEDSH*RRFFTC
Trigger: ACATGTGAAAAACCTTCTGCAATGTGAATCCTCACT...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATGCTTTCCTCTTCCTCTaGATTTCTGAGTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNAFLFL*ISEYFF
Trigger: AAAGAAATACTCAGAAATGCAGAGGAAGAGGAAAGC...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCATATTCCAGGCATGTaGTCGTACCCGGCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLHIPGM*SYPAFL
Trigger: GAGGAAAGCCGGGTACGAGCACATGCCTGGAATATG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATACAGCTTCTGGCTTaGATCCCATTCCCCGTGGAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLIQLLA*IPFPVD
Trigger: GTCCACGGGGAATGGGATGCAAGCCAGAAGCTGTAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGGCAGAAAGGTTGACATaGTTGGCTCTGCATGATGAT +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGAERLT*LALHDD
Trigger: ATCATCATGCAGAGCCAAGCATGTCAACCTTTCTGC...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGTCATCATCTCTTGTaGCTAGCACCTGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGHHLL*LAPELG
Trigger: TCCCAGCTCAGGTGCTAGGCACAAGAGATGATGACC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTTCCCACTGGCAAGGATaGCTTAGTCACTACCCTCTT +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTSHWQG*LSHYPL
Trigger: AAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGA...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCTTTCTTGCTGTGTTTaGTCCGCTTCTCAAGGTATC +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGLSCCV*SASQGI
Trigger: GATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAG...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATCTTTCTTGCTGTGTTTaGTCCGCTTCTCAAGGTATC +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNLSCCV*SASQGI
Trigger: GATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAG...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR GCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTCTTTCTTGCTGTGTTTaGTCCGCTTCTCAAGGTATC +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSLSCCV*SASQGI
Trigger: GATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAG...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR GCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTTGTCTCCTTCTGGTGTaGTCAGAAGTCACTAGGGGA +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTCLLLV*SEVTRG
Trigger: TCCCCTAGTGACTTCTGAGCACACCAGAAGGAGACA...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCTCGGTCTGTAACATaGTCTGCAGCTTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLARSVT*SAASSP
Trigger: AGGAGAGGAAGCTGCAGAGCATGTTACAGACCGAGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp GGGCTTAGAGGTATTAACCCTCTCATTTTACAGGTAAATTGGCCAAAAGTGCTTAGTGCTTCATTACCTTaGCCAGCAAGAAAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GLRGINPLILQVNWPKVLSASLP*PARKGR
Trigger: TCTTCCCTTTCTTGCTGGGCAAGGTAATGAAGCACT...AAGCACTTTTGGCCAATTTACCTGTAAAATGAGAGGGTTAATACCTCTAAGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTGATTGCGTCAATATaGCCTCCTCCAGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLIASI*PPPERG
Trigger: TCCCCTCTCTGGAGGAGGGCATATTGACGCAATCAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTACTGATTGCGTCAATATaGCCTCCTCCAGAGAGGGGA +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLLIASI*PPPERG
Trigger: TCCCCTCTCTGGAGGAGGGCATATTGACGCAATCAG...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGGAAAGTAGACGGTACTaGTGGTGTGTCAGTCATCTG +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQESRRY*WCVSHL
Trigger: CAGATGACTGACACACCAGCAGTACCGTCTACTTTC...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGACTAAGGGTAGCTGCTaGAAACTCAGTTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMTKGSC*KLSFLV
Trigger: GACCAGAAAACTGAGTTTCCAGCAGCTACCCTTAGT...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGTGGGATGGAGTCTTCTaGTCATTTGGTCCAATCACA +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMWDGVF*SFGPIT
Trigger: TGTGATTGGACCAAATGACCAGAAGACTCCATCCCA...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCAGTTACATGACTACCTaGCAATTCCTGTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGSYMTT*QFLWTE
Trigger: TTCAGTCCACAGGAATTGCCAGGTAGTCATGTAACT...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGAGTTACATGACTACCTaGCAATTCCTGTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLSYMTT*QFLWTE
Trigger: TTCAGTCCACAGGAATTGCCAGGTAGTCATGTAACT...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTGACTCTGTAAACCCTTaGACAAGTCAGTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SILICRDSLLFGQASSGTDSVNP*TSQLFF
Trigger: GAAGAACAACTGACTTGTCCAAGGGTTTACAGAGTC...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTACTACATACAGCTTCTaGCTTGCATCCCATTCCCCG +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTTTYSF*LASHSP
Trigger: CGGGGAATGGGATGCAAGCCAGAAGCTGTATGTAGT...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TGGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTTGTCCATTATGTTTTGGAAATGGGAGTTGTTCTaGTCTAAGGATGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: WGDLLIPLWITNLSIMFWKWELF*SKDAER
Trigger: CCTTTCTGCATCCTTAGACCAGAACAACTCCCATTT...CCAAAACATAATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCGGTGGTATCTGATTTaGAATCCGGAGATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHRWYLI*NPEMEE
Trigger: TTCCTCCATCTCCGGATTCCAAATCAGATACCACCG...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCGGTGGTATCTGATTTaGAATCCGGAGATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSRWYLI*NPEMEE
Trigger: TTCCTCCATCTCCGGATTCCAAATCAGATACCACCG...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTGGGAGCTTTCAACGGTaGTATCTGATTTGGAATCCG +
Preference number: 4 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTGSFQR*YLIWNP
Trigger: CGGATTCCAAATCAGATACCACCGTTGAAAGCTCCC...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGGAGCTTTCAACGGTaGTATCTGATTTGGAATCCG +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANGSFQR*YLIWNP
Trigger: CGGATTCCAAATCAGATACCACCGTTGAAAGCTCCC...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCATCATTGGATCCTGAATaGGAGCTTTCAACGGTGGTA +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERASLDPE*ELSTVV
Trigger: TACCACCGTTGAAAGCTCCCATTCAGGATCCAATGA...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTTCATTGGATCCTGAATaGGAGCTTTCAACGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSSLDPE*ELSTVV
Trigger: TACCACCGTTGAAAGCTCCCATTCAGGATCCAATGA...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAGAGCAATGGCATCATTaGATCCTGAATGGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAEQWHH*ILNGSF
Trigger: AAAGCTCCCATTCAGGATCCAATGATGCCATTGCTC...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATGAGCAATGGCATCATTaGATCCTGAATGGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNEQWHH*ILNGSF
Trigger: AAAGCTCCCATTCAGGATCCAATGATGCCATTGCTC...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAGGAAGTCTGGAGCAATaGCATCATTGGATCCTGAAT +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAGSLEQ*HHWILN
Trigger: ATTCAGGATCCAATGATGCCATTGCTCCAGACTTCC...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGGAAGTCTGGAGCAATaGCATCATTGGATCCTGAAT +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSGSLEQ*HHWILN
Trigger: ATTCAGGATCCAATGATGCCATTGCTCCAGACTTCC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCAGCAGCAGCAGCACTaGAATCTGCAGTATCTTTCT +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSQQQQH*NLQYLS
Trigger: AGAAAGATACTGCAGATTCCAGTGCTGCTGCTGCTG...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCGGATTCTTTATTGTTTaGCCAGGCTTCCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEIGFFIV*PGFLGN
Trigger: GTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCC...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp TTCTCCCACTGGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTCGAGAGAATGTGTGATTaGATTCTGAAGAATTTTAGC +
Preference number: 4 (lower is better)
Translates to: FSHWQGCLSHYPLTVDSFERMCD*ILKNFS
Trigger: GCTAAAATTCTTCAGAATCCAATCACACATTCTCTC...GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCCAGGGTCTGGTCTTaGTTATTGGTTCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSSRVWS*LLVQTR
Trigger: CCTGGTTTGAACCAATAACCAAGACCAGACCCTGGA...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCCTCTTTTTATATAGCTaGGCTCGCAGCCGGTATGAC +
Preference number: 4 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEILFLYS*ARSRYD
Trigger: GTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCTCTTTTTATATAGCTaGGCTCGCAGCCGGTATGAC +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSLFLYS*ARSRYD
Trigger: GTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACTCCCCTGCAGGCCCTTaGTTAAATATGTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHSPAGP*LNMFLP
Trigger: AGGCAGAAACATATTTAACCAAGGGCCTGCAGGGGA...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAGCTGATAGAAAGCACTaGGCTTTTCTCCAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQADRKH*AFLQVK
Trigger: CTTCACTTGGAGAAAAGCCCAGTGCTTTCTATCAGC...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGGTGTTTCCTCACATaGTCATCTGCACGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLWCFLT*SSARGA
Trigger: AGCCCCACGTGCAGATGACCATGTGAGGAAACACCA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAGCAAGAAGGAAGGTCTaGAGCTACATAATCCTGATG +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAARRKV*SYIILM
Trigger: CATCAGGATTATGTAGCTCCAGACCTTCCTTCTTGC...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCCTGGCGCTTTGCTTTaGCATTGTTCAAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMPGALL*HCSREM
Trigger: CATTTCTCTTGAACAATGCCAAAGCAAAGCGCCAGG...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCCTGGCGCTTTGCTTTaGCATTGTTCAAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGPGALL*HCSREM
Trigger: CATTTCTCTTGAACAATGCCAAAGCAAAGCGCCAGG...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATGCTGGAACTTGGAGTTaGGAAAGTTATCCCAACATC +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNAGTWS*ESYPNI
Trigger: GATGTTGGGATAACTTTCCCAACTCCAAGTTCCAGC...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
3UTR CAA 72 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATaGGACAAGGCCACTATGCAGAAAGTATTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRP*DKATMQKVLLP
Trigger: TGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCTGGCAACTCCTGTTaGGAGATAACACTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSGNSC*EITLGF
Trigger: GAAGCCCAGTGTTATCTCTCAACAGGAGTTGCCAGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCGCAATTCCTGTGGACTaGAAATATTCGATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGAIPVD*KYSISL
Trigger: GAGAGAAATCGAATATTTTCAGTCCACAGGAATTGC...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCTGGTCCAGGAATTGTTaGAACCTTCAGCACATCTTC +
Preference number: 4 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEIWSRNC*NLQHIF
Trigger: GAAGATGTGCTGAAGGTTTCAACAATTCCTGGACCA...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR TCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATTGGTCCAGGAATTGTTaGAACCTTCAGCACATCTTC +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANWSRNC*NLQHIF
Trigger: GAAGATGTGCTGAAGGTTTCAACAATTCCTGGACCA...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TTGGTGATGCTGCTATATAATTTAATTCGTCTGGGTGACAAGCATACTCTTTCAGTGATTCTCACCATGTaGGTAAGTACCAGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LVMLLYNLIRLGDKHTLSVILTM*VSTRGN
Trigger: GTTCCCTCTGGTACTTACTCACATGGTGAGAATCAC...TGAAAGAGTATGCTTGTCACCCAGACGAATTAAATTATATAGCAGCATCACCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR TCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCCTTTGGACATGTTCTaGAACAAGCTTGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGPLDMF*NKLVIL
Trigger: GAGAATCACAAGCTTGTTTCAGAACATGTCCAAAGG...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTGGGCTTTCCTCTGTaGATGGCTGTCTGTGAAGCA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLGFPL*MAVCEA
Trigger: TGCTTCACAGACAGCCATTCACAGAGGAAAGCCCAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTAGCATGATTCAGTaGGGATTCACATTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLFSMIQ*GFTLQK
Trigger: CTTCTGCAATGTGAATCCTCACTGAATCATGCTAAA...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAACAAATAACTCTGCCTTaGTCTCTTCTACTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQQITLP*SLLLSS
Trigger: GGAGGAAAGTAGAAGAGATCAAGGCAGAGTTATTTG...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCATCAGTTGTTCTTCCATaGCCAAATAACTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERASVVLP*PNNSAL
Trigger: CAAGGCAGAGTTATTTGGTCATGGAAGAACAACTGA...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGCTCTCAATAATAATGTaGCTACATACAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSLSIIM*LHTASG
Trigger: GCCAGAAGCTGTATGTAGTCACATTATTATTGAGAG...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCCTCTGGTCATTTCTaGGGGTCCAGCAGATCTGAA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSSGHF*GSSRSE
Trigger: TTCAGATCTGCTGGACCCTCAGAAATGACCAGAGGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTAGGAATTCCAAACTTTaGAATGGGAGTTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMARNSKL*NGSCSG
Trigger: ACCAGAACAACTCCCATTTCAAAGTTTGGAATTCCT...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp CACTCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGAGTGACTGCATCAGATaGCAATTTTTCAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: HSFPKIHGKYLDHLVGVRSDCIR*QFFRES
Trigger: GCTTTCTCTGAAAAATTGTCATCTGATGCAGTCACT...CCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CACTCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGCTGTTGTTATCTGAGTaGCTGCATCAGATGACAATT +
Preference number: 4 (lower is better)
Translates to: HSFPKIHGKYLDHLVGVRLLLSE*LHQMTI
Trigger: AATTGTCATCTGATGCAGTCACTCAGATAACAACAG...CCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCCTGTTGTTATCTGAGTaGCTGCATCAGATGACAATT +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGLLLSE*LHQMTI
Trigger: AATTGTCATCTGATGCAGTCACTCAGATAACAACAG...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTATGATGAGGCAAACTTaGCAGGAGCTTTGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTMMRQT*QELCVA
Trigger: AGCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCAT...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAAATGTTAACAGTGGCTaGGAGGTCATCATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQNVNSG*EVIISC
Trigger: ACAAGAGATGATGACCTCTCAGCCACTGTTAACATT...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTAATGTTAACAGTGGCTaGGAGGTCATCATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSNVNSG*EVIISC
Trigger: ACAAGAGATGATGACCTCTCAGCCACTGTTAACATT...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR TCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGCCAGTGATTAGCACTTaGACTGAGGCATCTGCATTT +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQPVIST*TEASAF
Trigger: AAATGCAGATGCCTCAGTTCAAGTGCTAATCACTGG...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGCCAGTGATTAGCACTTaGACTGAGGCATCTGCATTT +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERPVIST*TEASAF
Trigger: AAATGCAGATGCCTCAGTTCAAGTGCTAATCACTGG...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTCATGGCAAATATCTTaGTCACTTGGTAGGTGTACG +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACSWQIS*SLGRCT
Trigger: CGTACACCTACCAAGTGATCAAGATATTTGCCATGA...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTCATGGCAAATATCTTaGTCACTTGGTAGGTGTACG +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNSWQIS*SLGRCT
Trigger: CGTACACCTACCAAGTGATCAAGATATTTGCCATGA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCTGGGGTGACCTTCTaGTCCCTTTGTGGATCACTA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSGVTF*SLCGSL
Trigger: TAGTGATCCACAAAGGGATCAGAAGGTCACCCCAGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTGTTTGCTCTGGGGTaGCCTTCTGATCCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLFALG*PSDPFV
Trigger: CACAAAGGGATCAGAAGGTCACCCCAGAGCAAACAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAAACTCACAGTGTGCTaGGTTGTTTGCTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLKLTVC*VVCSGV
Trigger: CACCCCAGAGCAAACAACTCAGCACACTGTGAGTTT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCATCATGTGTACTTTCTaGGACCTGGAGAGAATGTGT +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLIMCTF*DLERMC
Trigger: ACACATTCTCTCCAGGTCTCAGAAAGTACACATGAT...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATATCATGTGTACTTTCTaGGACCTGGAGAGAATGTGT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNIMCTF*DLERMC
Trigger: ACACATTCTCTCCAGGTCTCAGAAAGTACACATGAT...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGTTTCTCCCCAGAAGTTaGTTGGTCACTCTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSFLPRS*LVTLFL
Trigger: TAAAAAGAGAGTGACCAATCAACTTCTGGGGAGAAA...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCTATAAGCGGGTGCTaGGATACACTAAAGCGACTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPISGC*DTLKRL
Trigger: CAGTCGCTTTAGTGTATCTCAGCACCCGCTTATAGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGCCAATACTGCCCATATaGACGAGCAGCATCAAAATG +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQPILPI*TSSIKM
Trigger: CATTTTGATGCTGCTCGTTCATATGGGCAGTATTGG...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTCCAATACTGCCCATATaGACGAGCAGCATCAAAATG +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFPILPI*TSSIKM
Trigger: CATTTTGATGCTGCTCGTTCATATGGGCAGTATTGG...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTCTGAGATCTGAAGAGTaGTATTCCGACTCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACLRSEE*YSDSLV
Trigger: AACAAGAGAGTCGGAATATCACTCTTCAGATCTCAG...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCACAACATTCTGAGATCTaGAGAGTGATATTCCGACTC +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAQHSEI*RVIFRL
Trigger: GAGTCGGAATATCACTCTTCAGATCTCAGAATGTTG...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGAGGTCCTCTACATGTaGGTGGGATGTAGAGGATAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLEVLYM*VGCRGY
Trigger: GTATCCTCTACATCCCACTCACATGTAGAGGACCTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGGAGGTCCTCTACATGTaGGTGGGATGTAGAGGATAC +
Preference number: 4 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILEVLYM*VGCRGY
Trigger: GTATCCTCTACATCCCACTCACATGTAGAGGACCTC...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAAGATTTCTCGCTATGTaGGTGAGAATTAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQRFLAM*VRIRGH
Trigger: GTGTCCTCTAATTCTCACTCACATAGCGAGAAATCT...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGGAGCAGAAGAAACTCTaGGAGCCTCTTCAGGTATTT +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQEQKKL*EPLQVF
Trigger: AAATACCTGAAGAGGCTCTCAGAGTTTCTTCTGCTC...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTAGGCTTCCCCCTATTTaGGTAGCTAGTAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFRLPPI*VASRMY
Trigger: GTACATTCTACTAGCTACTCAAATAGGGGGAAGCCT...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGGTACTGGGCTCAGAATaGCTGCCTGTAAAATCTGAT +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQVLGSE*LPVKSD
Trigger: ATCAGATTTTACAGGCAGTCATTCTGAGCCCAGTAC...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGTACTGGGCTCAGAATaGCTGCCTGTAAAATCTGAT +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANVLGSE*LPVKSD
Trigger: ATCAGATTTTACAGGCAGTCATTCTGAGCCCAGTAC...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACAGTGATTTGGGGCTaGCTGGGAGACCACAGTATT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTVIWG*LGDHSI
Trigger: AATACTGTGGTCTCCCAGTCAGCCCCAAATCACTGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCTTGATTGATCCAGAGTaGCAATGGAGCTGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEILIDPE*QWSCLH
Trigger: ATGAAGGCAGCTCCATTGTCACTCTGGATCAATCAA...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR GCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCCCAGGAACCCCTATTaGTTTCAAAGTTACTTCAGT +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGPRNPY*FQSYFS
Trigger: ACTGAAGTAACTTTGAAAGCAATAGGGGTTCCTGGG...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGAACTAAGGGTAGCTaGTGGAAACTCAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANGTKGS*WKLSFL
Trigger: CAGAAAACTGAGTTTCCAGCAGCTACCCTTAGTTCC...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTATTGCATCGTTTCAGTaGCATATTTTCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAIASFQ*HIFCLH
Trigger: ATGGAGGCAGAAAATATGGCACTGAAACGATGCAAT...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGATTGCATCGTTTCAGTaGCATATTTTCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSIASFQ*HIFCLH
Trigger: ATGGAGGCAGAAAATATGGCACTGAAACGATGCAAT...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp CACATTGATGCTGAGGCTCTTTATTCTGGTATAATCTGTCTTAGTCTTGTCCATCAATATCCTTCTGTATaGACCTGCTGCTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: HIDAEALYSGIICLSLVHQYPSV*TCCLGF
Trigger: AAAGCCCAAGCAGCAGGTGCATACAGAAGGATATTG...ATGGACAAGACTAAGACAGATTATACCAGAATAAAGAGCCTCAGCATCAATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATCAATATCCTTCTGTATaGACCTGCTGCTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANQYPSV*TCCLGF
Trigger: AAAGCCCAAGCAGCAGGTGCATACAGAAGGATATTG...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGCACCCTCTTCCTCCCTaGTATCTGTTATACTTGTCT +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERHPLPP*YLLYLS
Trigger: AGACAAGTATAACAGATAGCAGGGAGGAAGAGGGTG...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCCCACTGGCAAGGATaGCTTAGTCACTACCCTCTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSHWQG*LSHYPL
Trigger: AAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAGCAGCACTGGAATCTaGAGTATCTTTCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERASSTGI*SIFLQR
Trigger: TCTTTGCAGAAAGATACTGCAGATTCCAGTGCTGCT...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCAGCAGCACTGGAATCTaGAGTATCTTTCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLSSTGI*SIFLQR
Trigger: TCTTTGCAGAAAGATACTGCAGATTCCAGTGCTGCT...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGAGCTACTCCTTTCGTaGAGAGCCACCTCTCTATCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLELLLS*RATSLS
Trigger: AGATAGAGAGGTGGCTCTGCACGAAAGGAGTAGCTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATCTTTCTTGCTGTGTTTaGTCCGCTTCTCAAGGTATC +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANLSCCV*SASQGI
Trigger: GATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAG...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGTATTCAGCACTTTCTTaGTGTGTTTGCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGYSALS*CVCSAS
Trigger: AGAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATA...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTATTCAGCACTTTCTTaGTGTGTTTGCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNYSALS*CVCSAS
Trigger: AGAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR GCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTTATTCAGCACTTTCTTaGTGTGTTTGCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSYSALS*CVCSAS
Trigger: AGAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATA...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGTCTCCTTCTGGTGTaGTCAGAAGTCACTAGGGGA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLCLLLV*SEVTRG
Trigger: TCCCCTAGTGACTTCTGAGCACACCAGAAGGAGACA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTCCTGCTGGTGGAAAATaGTGGGCTTTTCTCTATGTT +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFPAGGK*WAFLYV
Trigger: AACATAGAGAAAAGCCCAGCATTTTCCACCAGCAGG...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAAATACCCCCACAGATaGTCCAGTACACTGGCTACC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLKYPHR*SSTLAT
Trigger: GGTAGCCAGTGTACTGGAGCATCTGTGGGGGTATTT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTGCACGTGGGGCTTTaGTTTGTTCAAAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLHVGL*FVQRAL
Trigger: GAGAGCTCTTTGAACAAAGCAAAGCCCCACGTGCAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGAGATTCTTGATCCTGTaGTACAGGTTTACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLRFLIL*YRFTGQ
Trigger: TTGACCAGTAAACCTGTAGCACAGGATCAAGAATCT...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTAGAAATCACATGGTTTaGTACCTGGATGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSRNHMV*YLDVSP
Trigger: AGGAGACACATCCAGGTAGCAAACCATGTGATTTCT...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000651750.1
CDS-3UTR GCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCAGAAATCACATGGTTTaGTACCTGGATGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLRNHMV*YLDVSP
Trigger: AGGAGACACATCCAGGTAGCAAACCATGTGATTTCT...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000651750.1
CDS-3UTR GCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACTGGACAAGGCCACTATaGAGAAAGTATTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHWTRPL*RKYCSQ
Trigger: TTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCA...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGAGTGCTCTCTCTGTaGGTAGGAATTAGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRVLSL*VGIRGQ
Trigger: CTGCCCTCTAATTCCTACCCACAGAGAGAGCACTCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGGGAAACTCAGTTTTCTaGTCATCTGGTATATGCACA +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLGNSVF*SSGICT
Trigger: TGTGCATATACCAGATGACCAGAAAACTGAGTTTCC...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATACTAAGGGTAGCTGCTaGAAACTCAGTTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANTKGSC*KLSFLV
Trigger: GACCAGAAAACTGAGTTTCCAGCAGCTACCCTTAGT...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATAAAAGCTGTCTGGGATaGAGTCTTCTGGTCATTTGG +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANKSCLG*SLLVIW
Trigger: CCAAATGACCAGAAGACTCCATCCCAGACAGCTTTT...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCGACAACTAGAGAGAGATACTaGTTTTCCAGTATTCACATC +
Preference number: 4 (lower is better)
Translates to: LSCRATSLSVWVNISDSTTRERY*FSSIHI
Trigger: GATGTGAATACTGGAAAACCAGTATCTCTCTCTAGT...TGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTAACCATTTCCATCACTaGCATCACTACTTGAATCAC +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMANHFHH*HHYLNH
Trigger: GTGATTCAAGTAGTGATGCCAGTGATGGAAATGGTT...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAGACTCTGTAAACCCTTaGACAAGTCAGTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERADSVNP*TSQLFF
Trigger: GAAGAACAACTGACTTGTCCAAGGGTTTACAGAGTC...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACTACATACAGCTTCTaGCTTGCATCCCATTCCCCG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTTYSF*LASHSP
Trigger: CGGGGAATGGGATGCAAGCCAGAAGCTGTATGTAGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAAATGGGAGTTGTTCTaGTCTAAGGATGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAKWELF*SKDAER
Trigger: CCTTTCTGCATCCTTAGACCAGAACAACTCCCATTT...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGCATCTTTTCATCGAATaGCATTCGAAGACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLHLFIE*HSKTFA
Trigger: AGCAAAGGTCTTCGAATGCCATTCGATGAAAAGATG...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGGCTTTGCGTAGCTTCTaGTTACCAGGCTCTATAATT +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGALRSF*LPGSII
Trigger: AATTATAGAGCCTGGTAACCAGAAGCTACGCAAAGC...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGGAAAAAGTAACCTGTTaGACTGAAGATGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQEKVTC*TEDDEA
Trigger: TGCCTCATCATCTTCAGTCCAACAGGTTACTTTTTC...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTGAAAAAGTAACCTGTTaGACTGAAGATGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAEKVTC*TEDDEA
Trigger: TGCCTCATCATCTTCAGTCCAACAGGTTACTTTTTC...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGCAATAATAAAGGCTaGCCATCTGTGCCGCGAGAA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGNNKG*PSVPRE
Trigger: TTCTCGCGGCACAGATGGCCAGCCTTTATTATTGCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGTCATTGGATCCTGAATaGGAGCTTTCAACGGTGGTA +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQSLDPE*ELSTVV
Trigger: TACCACCGTTGAAAGCTCCCATTCAGGATCCAATGA...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCGGAAGTCTGGAGCAATaGCATCATTGGATCCTGAAT +
Preference number: 4 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEIGSLEQ*HHWILN
Trigger: ATTCAGGATCCAATGATGCCATTGCTCCAGACTTCC...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTGAGCTGGGAAGTCTaGAGCAATGGCATCATTGGA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLSWEV*SNGIIG
Trigger: TCCAATGATGCCATTGCTCCAGACTTCCCAGCTCAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGGTTTTTCTCCCACTaGCAAGGATGCCTTAGTCAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGFFSH*QGCLSH
Trigger: GTGACTAAGGCATCCTTGCCAGTGGGAGAAAAACCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCTTTTTCTTTAGCCTaGGCAGCCTCAGTCACTGCC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSFSLA*AASVTA
Trigger: GGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAGGATTCTTTATTGTTTaGCCAGGCTTCCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKGFFIV*PGFLGN
Trigger: GTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCC...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTGAGTTGTTTGCTCTaGGGTGACCTTCTGATCCCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLSCLL*GDLLIP
Trigger: AGGGATCAGAAGGTCACCCCAGAGCAAACAACTCAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGAGGTATCTCCTCTGTTaGTTGGTGATGCTGCTATAT +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGRYLLC*LVMLLY
Trigger: ATATAGCAGCATCACCAACCAACAGAGGAGATACCT...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATAGGTATCTCCTCTGTTaGTTGGTGATGCTGCTATAT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNRYLLC*LVMLLY
Trigger: ATATAGCAGCATCACCAACCAACAGAGGAGATACCT...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCTCCCTCCAGGGTCTaGTCTTGGTTATTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLAPSRV*SWLLVQ
Trigger: TTGAACCAATAACCAAGACCAGACCCTGGAGGGAGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAGCTCCCTCCAGGGTCTaGTCTTGGTTATTGGTTCAA +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLAPSRV*SWLLVQ
Trigger: TTGAACCAATAACCAAGACCAGACCCTGGAGGGAGC...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGTCAGGCGCAAATTCTTaGTCTTGTGTCAAACAGGTC +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERSGANS*SCVKQV
Trigger: GACCTGTTTGACACAAGACCAAGAATTTGCGCCTGA...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGTTCACTAACTTCCGATaGTCGAGAAGACCATTCAGT +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMFTNFR*SRRPFS
Trigger: ACTGAATGGTCTTCTCGACCATCGGAAGTTAGTGAA...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTAGGGAAAAGAAAGTCTaGCAGGGTCTGCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTREKKV*QGLLGK
Trigger: TTTTCCCAGCAGACCCTGCCAGACTTTCTTTTCCCT...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGTGTCCCAGTCTTCTaGGCAGCCAATACAGAAACA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGVPVF*AANTET
Trigger: TGTTTCTGTATTGGCTGCCCAGAAGACTGGGACACC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGTAGACGGTACTGCTaGTGTGTCAGTCATCTGGTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSRRYC*CVSHLV
Trigger: GACCAGATGACTGACACACCAGCAGTACCGTCTACT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAAGTAGACGGTACTGCTaGTGTGTCAGTCATCTGGTC +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLSRRYC*CVSHLV
Trigger: GACCAGATGACTGACACACCAGCAGTACCGTCTACT...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGGTATATGAGTACCTaGCAAGGCCTGCTGGTGGAA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRYMST*QGLLVE
Trigger: TTCCACCAGCAGGCCTTGCCAGGTACTCATATACCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCTCTCCAAGTGCACTaGAACCTAAAGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSLQVH*NLKVLL
Trigger: CAGCAGGACCTTTAGGTTCCAGTGCACTTGGAGAGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAATTTGCCCTGGTACTaGGCTCAGAATGACTGCCTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLNLPWY*AQNDCL
Trigger: CAGGCAGTCATTCTGAGCCCAGTACCAGGGCAAATT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAAATTTGCCCTGGTACTaGGCTCAGAATGACTGCCTG +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLNLPWY*AQNDCL
Trigger: CAGGCAGTCATTCTGAGCCCAGTACCAGGGCAAATT...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGTTTACTCCTAGGGTaGAACTTGGTCTGCCCATGC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLCLLLG*NLVCPC
Trigger: GCATGGGCAGACCAAGTTCCACCCTAGGAGTAAACA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGATTGTTCAAGAGAAATaGGAGACGGAAGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMIVQEK*ETEGLK
Trigger: CTTCAGACCTTCCGTCTCCCATTTCTCTTGAACAAT...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTGGTGTTTATTCATTTaGTCATCTACACCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNWCLFI*SSTPGA
Trigger: AGCGCCAGGTGTAGATGACCAAATGAATAAACACCA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGAATAGTGTTACTGTCTaGAAGAGAAGGCTGTACGAC +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMNSVTV*KRRLYD
Trigger: GTCGTACAGCCTTCTCTTCCAGACAGTAACACTATT...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTAATAGTGTTACTGTCTaGAAGAGAAGGCTGTACGAC +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACNSVTV*KRRLYD
Trigger: GTCGTACAGCCTTCTCTTCCAGACAGTAACACTATT...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGGTCCCCTCTGGATTaGAATGTCCTTCGAAATCTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGSPLD*NVLRNL
Trigger: CAGATTTCGAAGGACATTCCAATCCAGAGGGGACCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTACTGGGGTCCCCTCTaGATTGGAATGTCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLYWGPL*IGMSFE
Trigger: TTCGAAGGACATTCCAATCCAGAGGGGACCCCAGTA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCGATCTGCAAATACTaGGGTCCCCTCTGGATTGGA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSICKY*GPLWIG
Trigger: TCCAATCCAGAGGGGACCCCAGTATTTGCAGATCGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGCCTCGCTGGAACTTaGAGTTGGGAAAGTTATCCC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSLAGT*SWESYP
Trigger: GGGATAACTTTCCCAACTCCAAGTTCCAGCGAGGCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCATACATGACAGGTCAATaGAACAATCTTCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAYMTGQ*NNLLQG
Trigger: TCCCTGGAGAAGATTGTTCCATTGACCTGTCATGTA...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAAGGCTTCTCTGTATGTaGATAGAAAGAGGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQRLLCM*IERGSY
Trigger: GTAACTTCCTCTTTCTATTCACATACAGAGAAGCCT...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGGCTTCTCTATTTGTaGGTAGGAACTAAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGLLYL*VGTKGS
Trigger: GCTACCCTTAGTTCCTACTCACAAATAGAGAAGCCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTTGGTCCAATCACAGTTaGAATCTTGGGCTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTWSNHS*NLGLLY
Trigger: ATAGAGAAGCCCAAGATTTCAACTGTGATTGGACCA...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR TCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATTGGTCCAATCACAGTTaGAATCTTGGGCTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANWSNHS*NLGLLY
Trigger: ATAGAGAAGCCCAAGATTTCAACTGTGATTGGACCA...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGTGATTCTCACCATGTaGGTAAGTACCAGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLVILTM*VSTRGN
Trigger: GTTCCCTCTGGTACTTACTCACATGGTGAGAATCAC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCACTCTGTCATCAGCCTaGGAATTTAAAAGCACATTA +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGTLSSA*EFKSTL
Trigger: TAATGTGCTTTTAAATTCTCAGGCTGATGACAGAGT...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGGTGAATGGCTGTCTGTaGAGCAAATCACCATTAGAT +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQVNGCL*SKSPLD
Trigger: ATCTAATGGTGATTTGCTTCACAGACAGCCATTCAC...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTGTGAATGGCTGTCTGTaGAGCAAATCACCATTAGAT +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFVNGCL*SKSPLD
Trigger: ATCTAATGGTGATTTGCTTCACAGACAGCCATTCAC...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTGTGAATGGCTGTCTGTaGAGCAAATCACCATTAGAT +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSVNGCL*SKSPLD
Trigger: ATCTAATGGTGATTTGCTTCACAGACAGCCATTCAC...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR TCA 90 bp TGGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTTGTCCATTATGTTTTGGACTGGCATCACTACTTaGATCACTTTTTATGACAGT +
Preference number: 4 (lower is better)
Translates to: WGDLLIPLWITNLSIMFWTGITT*ITFYDS
Trigger: ACTGTCATAAAAAGTGATTCAAGTAGTGATGCCAGT...CCAAAACATAATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCACTCTCAATAATAATGTaGCTACATACAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERALSIIM*LHTASG
Trigger: GCCAGAAGCTGTATGTAGTCACATTATTATTGAGAG...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACAGAATGTCGGTGAGATaGAAAAGTGATGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHRMSVR*KSDGGS
Trigger: ACTACCTCCATCACTTTTTCATCTCACCGACATTCT...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAGTGACTGCATCAGATaGCAATTTTTCAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERASDCIR*QFFRES
Trigger: GCTTTCTCTGAAAAATTGTCATCTGATGCAGTCACT...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAAGTGACTGCATCAGATaGCAATTTTTCAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQSDCIR*QFFRES
Trigger: GCTTTCTCTGAAAAATTGTCATCTGATGCAGTCACT...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATCTGTTGTTATCTGAGTaGCTGCATCAGATGACAATT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNLLLSE*LHQMTI
Trigger: AATTGTCATCTGATGCAGTCACTCAGATAACAACAG...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATGATGAGGCAAACTTaGCAGGAGCTTTGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLMMRQT*QELCVA
Trigger: AGCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTCAACGGTGGTATCTaGTTTGGAATCCGGAGATGG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLFNGGI*FGIRRW
Trigger: CCATCTCCGGATTCCAAATCAGATACCACCGTTGAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGAATGTTAACAGTGGCTaGGAGGTCATCATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERNVNSG*EVIISC
Trigger: ACAAGAGATGATGACCTCTCAGCCACTGTTAACATT...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAACCAGTGATTAGCACTTaGACTGAGGCATCTGCATTT +
Preference number: 4 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKPVIST*TEASAF
Trigger: AAATGCAGATGCCTCAGTTCAAGTGCTAATCACTGG...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGTCATGGCAAATATCTTaGTCACTTGGTAGGTGTACG +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERSWQIS*SLGRCT
Trigger: CGTACACCTACCAAGTGATCAAGATATTTGCCATGA...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTGTGATTGGATTCTaGAGAATTTTAGCCAAACGA +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMACVIGF*RILAKR
Trigger: TCGTTTGGCTAAAATTCTTCAGAATCCAATCACACA...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCCTGGAGAGAATGTGTaGTTGGATTCTGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGPGENV*LDSEEF
Trigger: AAATTCTTCAGAATCCAATCACACATTCTCTCCAGG...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATCCTGGAGAGAATGTGTaGTTGGATTCTGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNPGENV*LDSEEF
Trigger: AAATTCTTCAGAATCCAATCACACATTCTCTCCAGG...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp CACATTGATGCTGAGGCTCTTTATTCTGGTATAATCTGTCTTAGTCTTGTCCATATCATGTGTACTTTCTaGGACCTGGAGAGAATGTGT +
Preference number: 4 (lower is better)
Translates to: HIDAEALYSGIICLSLVHIMCTF*DLERMC
Trigger: ACACATTCTCTCCAGGTCTCAGAAAGTACACATGAT...ATGGACAAGACTAAGACAGATTATACCAGAATAAAGAGCCTCAGCATCAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTGTTCAATTTTAATTTaGTTAGACCTCCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLCSILI*LDLPAR
Trigger: TCGAGCTGGGAGGTCTAATCAAATTAAAATTGAACA...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCATTGGGTCAATATATCTaGTTCGACAGTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERALGQYI*FDSRSG
Trigger: ACCACTTCTACTGTCGAATCAGATATATTGACCCAA...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTGGGTCAATATATCTaGTTCGACAGTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLLGQYI*FDSRSG
Trigger: ACCACTTCTACTGTCGAATCAGATATATTGACCCAA...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTTTAATTCGTCTGGGTaGCAAGCATACTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNFNSSG*QAYSFM
Trigger: CATGAAAGAGTATGCTTGTCACCCAGACGAATTAAA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGAAGTCACTAGGGGATaGCCTGTATTCAGCACTTTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLEVTRG*PVFSTF
Trigger: GAAAGTGCTGAATACAGGTCATCCCCTAGTGACTTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTTCTCCCCAGAAGTTaGTTGGTCACTCTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLFLPRS*LVTLFL
Trigger: TAAAAAGAGAGTGACCAATCAACTTCTGGGGAGAAA...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTTTTCTCCCCAGAAGTTaGTTGGTCACTCTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSFLPRS*LVTLFL
Trigger: TAAAAAGAGAGTGACCAATCAACTTCTGGGGAGAAA...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGAAGAGTCCATTTCTTaGGGAAGACAATGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANEESIS*GRQCQD
Trigger: ATCTTGGCATTGTCTTCCTCAAGAAATGGACTCTTC...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGTTCTGCCTGCTTAGATaGATCTTCCTGTGTCCAATA +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQFCLLR*IFLCPI
Trigger: TATTGGACACAGGAAGATTCATCTAAGCAGGCAGAA...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGATGAGATCCAATGTCTaGATCAACAGGAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERMRSNV*INRSGS
Trigger: ACTACCACTCCTGTTGATTCAGACATTGGATCTCAT...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAAGGGACAAGGATAAATaGGATCCAATGTCTGAATCA +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQRDKDK*DPMSES
Trigger: TGATTCAGACATTGGATCTCATTTATCCTTGTCCCT...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCACTAATGTCTTTTGGTTaGGAGTATCAGTGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERALMSFG*EYQCVD
Trigger: GTCAACACACTGATACTCTCAACCAAAAGACATTAG...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGGTCCAGGAGTGGCTaGAACTTTAGTAAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLWSRSG*NFSKSL
Trigger: GAGACTCTTACTAAAGTTTCAGCCACTCCTGGACCA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCCTCTTCAGTTAGATaGCTATTGGGTAAGGTCTGC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLASSVR*LLGKVC
Trigger: GCAGACCTTACCCAATAGTCATCTAACTGAAGAGGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGGTCCAGTAACAGCTaGAACTTTCTGAGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLWSSNS*NFLSLF
Trigger: GAAGAGGCTCAGAAAGTTTCAGCTGTTACTGGACCA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGGTCCAAGAACAGGTaGAACTTTCTGTGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLWSKNR*NFLCLF
Trigger: GAAGAGGCACAGAAAGTTTCACCTGTTCTTGGACCA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTGTTCTTCAGTGAAATaGGAATTAAATACCCCCACA +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLCSSVK*ELNTPT
Trigger: TGTGGGGGTATTTAATTCTCATTTCACTGAAGAACA...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTGGGAGACCACAGTATTaGACTTGGCTTCAACATTTA +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFGRPQY*TWLQHL
Trigger: TAAATGTTGAAGCCAAGTTCAATACTGTGGTCTCCC...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTGGGAGACCACAGTATTaGACTTGGCTTCAACATTTA +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSGRPQY*TWLQHL
Trigger: TAAATGTTGAAGCCAAGTTCAATACTGTGGTCTCCC...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGAGGTTGGTTCCAGTaGTCTCGAAGATACAGTATG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGGWFQ*SRRYSM
Trigger: CATACTGTATCTTCGAGATCACTGGAACCAACCTCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGATGGTTTTCAAGTCCTaGGTAATAGTGTTACTGTCT +
Preference number: 4 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQMVFKS*VIVLLS
Trigger: AGACAGTAACACTATTACTCAGGACTTGAAAACCAT...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAACTATCTGGCTATTCTaGGAAGGTATGGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERATIWLF*EGMVFK
Trigger: CTTGAAAACCATACCTTCTCAGAATAGCCAGATAGT...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTACTATCTGGCTATTCTaGGAAGGTATGGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSTIWLF*EGMVFK
Trigger: CTTGAAAACCATACCTTCTCAGAATAGCCAGATAGT...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR TCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGATCTGTTGCCATACATaGCAGGTCAATGGAACAATC +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERICCHT*QVNGTI
Trigger: GATTGTTCCATTGACCTGTCATGTATGGCAACAGAT...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTCAAATTCGTCTGTGTaGCAATATCCTTCTGTATGC +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACSNSSV*QYPSVC
Trigger: GCATACAGAAGGATATTGGCACACAGACGAATTTGA...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAATCAAATTCGTCTGTGTaGCAATATCCTTCTGTATGC +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQSNSSV*QYPSVC
Trigger: GCATACAGAAGGATATTGGCACACAGACGAATTTGA...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAACTCCCAATTTTCAATaGCTCTCCGGCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERATPNFQ*LSGISN
Trigger: ATTTGAAATGCCGGAGAGGCATTGAAAATTGGGAGT...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGACTCCCAATTTTCAATaGCTCTCCGGCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMTPNFQ*LSGISN
Trigger: ATTTGAAATGCCGGAGAGGCATTGAAAATTGGGAGT...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGACTCCCAATTTTCAATaGCTCTCCGGCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGTPNFQ*LSGISN
Trigger: ATTTGAAATGCCGGAGAGGCATTGAAAATTGGGAGT...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp TGGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTTGTCCATTATGTTTTGGAGTGAGGATTCACATTaGAGAAGGTTTTTCACATGT +
Preference number: 4 (lower is better)
Translates to: WGDLLIPLWITNLSIMFWSEDSH*RRFFTC
Trigger: ACATGTGAAAAACCTTCTGCAATGTGAATCCTCACT...CCAAAACATAATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGGCTTTCCTCTTCCTCTaGATTTCTGAGTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSAFLFL*ISEYFF
Trigger: AAAGAAATACTCAGAAATGCAGAGGAAGAGGAAAGC...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCATGATGATGGGTTCTaGCGTCCTCTGGTCATTTCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLHDDGF*RPLVIS
Trigger: AGAAATGACCAGAGGACGGCAGAACCCATCATCATG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTATATTCAGCACTTTCTTaGTGTGTTTGCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: IGQGHYAESIAPKPLGILYSALS*CVCSAS
Trigger: AGAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATA...TAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp GGTATTAACCCTCTCATTTTACAGGTAAATTGGCCAAAAGTGCTTCATTACCTTTATGAGTTGACCTCATaGACCATGGGTTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: GINPLILQVNWPKVLHYLYELTS*TMGSFP
Trigger: GGGAAAAGAACCCATGGTGCATGAGGTCAACTCATA...AAGGTAATGAAGCACTTTTGGCCAATTTACCTGTAAAATGAGAGGGTTAATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCCTGTGTCCAATACTaGCCATATGAACGAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSCVQY*PYERAA
Trigger: TGCTGCTCGTTCATATGGGCAGTATTGGACACAGGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGACTCAACCTTCCCCTaGAGGCCCTTGGTTAAATAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLDSTFP*RPLVKY
Trigger: ATATTTAACCAAGGGCCTGCAGGGGAAGGTTGAGTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGCAGCAACTCTTTCACTaGATACAACAGCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLQQLFH*IQQHFH
Trigger: ATGAAAATGCTGTTGTATGCAGTGAAAGAGTTGCTG...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGAAAGTAGACGGTACTaGTGGTGTGTCAGTCATCTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLESRRY*WCVSHL
Trigger: CAGATGACTGACACACCAGCAGTACCGTCTACTTTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCCTGCTGGTGGAAAATaGTGGGCTTTTCTCTATGTT +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTPAGGK*WAFLYV
Trigger: AACATAGAGAAAAGCCCAGCATTTTCCACCAGCAGG...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp ATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTACCAGTTGGTAGAAACTaGCAGACTTTGCTCTATGTT +
Preference number: 4 (lower is better)
Translates to: IGQGHYAESIAPKPLGILPVGRN*QTLLYV
Trigger: AACATAGAGCAAAGTCTGGCAGTTTCTACCAACTGG...TAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGCCAGTTGGTAGAAACTaGCAGACTTTGCTCTATGTT +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERPVGRN*QTLLYV
Trigger: AACATAGAGCAAAGTCTGGCAGTTTCTACCAACTGG...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTCTACATATGGGGCTTTaGACTGTTCAAAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFLHMGL*TVQRVL
Trigger: GAGAACTCTTTGAACAGTGCAAAGCCCCATATGTAG...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTAGATTCTTGATCCTGTaGTACAGGTTTACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSRFLIL*YRFTGQ
Trigger: TTGACCAGTAAACCTGTAGCACAGGATCAAGAATCT...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR GCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAATGTTCACTTGTATTTaGCTGGAGGTTACTATCTGG +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAMFTCI*LEVTIW
Trigger: CCAGATAGTAACCTCCAGGCAAATACAAGTGAACAT...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCATGTTCACTTGTATTTaGCTGGAGGTTACTATCTGG +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLMFTCI*LEVTIW
Trigger: CCAGATAGTAACCTCCAGGCAAATACAAGTGAACAT...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR GCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGAGAAATCACATGGTTTaGTACCTGGATGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQRNHMV*YLDVSP
Trigger: AGGAGACACATCCAGGTAGCAAACCATGTGATTTCT...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTTTGAGCTCAGGAAACTaGAGTCAATGTCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSLSSGN*SQCHSY
Trigger: ATAACTGTGACATTGACTGCAGTTTCCTGAGCTCAA...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CCA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGACTAGAGAGAGATACTaGTTTTCCAGTATTCACATC +
Preference number: 4 (lower is better)
Translates to: HSFPVGKKWYREERANGLTRERY*FSSIHI
Trigger: GATGTGAATACTGGAAAACCAGTATCTCTCTCTAGT...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTACCTGGCAATTCCTGTaGACTGAAAATATTCGATTT +
Preference number: 4 (lower is better)
Translates to: SILICRDSLLFGQASSGTTWQFL*TENIRF
Trigger: AAATCGAATATTTTCAGTCCACAGGAATTGCCAGGT...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGGCTTTGCGTAGCTTCTaGTTACCAGGCTCTATAATT +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQALRSF*LPGSII
Trigger: AATTATAGAGCCTGGTAACCAGAAGCTACGCAAAGC...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTGCTTTGCGTAGCTTCTaGTTACCAGGCTCTATAATT +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSALRSF*LPGSII
Trigger: AATTATAGAGCCTGGTAACCAGAAGCTACGCAAAGC...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGAAAAAGTAACCTGTTaGACTGAAGATGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSEKVTC*TEDDEA
Trigger: TGCCTCATCATCTTCAGTCCAACAGGTTACTTTTTC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCGGTGGTATCTGATTTaGAATCCGGAGATGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRWYLI*NPEMEE
Trigger: TTCCTCCATCTCCGGATTCCAAATCAGATACCACCG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGGAGCTTTCAACGGTaGTATCTGATTTGGAATCCG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGSFQR*YLIWNP
Trigger: CGGATTCCAAATCAGATACCACCGTTGAAAGCTCCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACCAGGCTCTATAATTTCATGTCCACGATCTTCAGCATTAATAAAAATCTCAGAGGGAGCTTTCAACGGTaGTATCTGATTTGGAATCCG +
Preference number: 4 (lower is better)
Translates to: TRLYNFMSTIFSINKNLRGSFQR*YLIWNP
Trigger: CGGATTCCAAATCAGATACCACCGTTGAAAGCTCCC...TCTGAGATTTTTATTAATGCTGAAGATCGTGGACATGAAATTATAGAGCCTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp TTGGTGATGCTGCTATATAATTTAATTCGTCTGGGTGACAAGCATACTCTTTCATCATTGGATCCTGAATaGGAGCTTTCAACGGTGGTA +
Preference number: 4 (lower is better)
Translates to: LVMLLYNLIRLGDKHTLSSLDPE*ELSTVV
Trigger: TACCACCGTTGAAAGCTCCCATTCAGGATCCAATGA...TGAAAGAGTATGCTTGTCACCCAGACGAATTAAATTATATAGCAGCATCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp TTGGTGATGCTGCTATATAATTTAATTCGTCTGGGTGACAAGCATACTCTTTCAGAGCAATGGCATCATTaGATCCTGAATGGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: LVMLLYNLIRLGDKHTLSEQWHH*ILNGSF
Trigger: AAAGCTCCCATTCAGGATCCAATGATGCCATTGCTC...TGAAAGAGTATGCTTGTCACCCAGACGAATTAAATTATATAGCAGCATCACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTGGAAGTCTGGAGCAATaGCATCATTGGATCCTGAAT +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTGSLEQ*HHWILN
Trigger: ATTCAGGATCCAATGATGCCATTGCTCCAGACTTCC...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCAGCAGCAGCAGCACTaGAATCTGCAGTATCTTTCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLQQQQH*NLQYLS
Trigger: AGAAAGATACTGCAGATTCCAGTGCTGCTGCTGCTG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGATTCTTTATTGTTTaGCCAGGCTTCCTCGGGAAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGFFIV*PGFLGN
Trigger: GTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTCTTCTGATCCCTTTGTaGATCACTAATTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: SILICRDSLLFGQASSGTLLIPL*ITNLSI
Trigger: AATGGACAAATTAGTGATCCACAAAGGGATCAGAAG...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATAGGTATCTCCTCTGTTaGTTGGTGATGCTGCTATAT +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANRYLLC*LVMLLY
Trigger: ATATAGCAGCATCACCAACCAACAGAGGAGATACCT...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp AGTTTTTCATCATTTCAAACAGAAACTCTGTACCCACTAGGCAAGAACTCCTTGAGGTATCTCCTCTGTTaGTTGGTGATGCTGCTATAT +
Preference number: 4 (lower is better)
Translates to: SFSSFQTETLYPLGKNSLRYLLC*LVMLLY
Trigger: ATATAGCAGCATCACCAACCAACAGAGGAGATACCT...CAAGGAGTTCTTGCCTAGTGGGTACAGAGTTTCTGTTTGAAATGATGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTAGGTATCTCCTCTGTTaGTTGGTGATGCTGCTATAT +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSRYLLC*LVMLLY
Trigger: ATATAGCAGCATCACCAACCAACAGAGGAGATACCT...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCCAGGGTCTGGTCTTaGTTATTGGTTCAAACCAGG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSRVWS*LLVQTR
Trigger: CCTGGTTTGAACCAATAACCAAGACCAGACCCTGGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTCTTTTTATATAGCTaGGCTCGCAGCCGGTATGAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLFLYS*ARSRYD
Trigger: GTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTACATTAAACCTAGTCTaGGATGTATCCAAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACTLNLV*DVSKVW
Trigger: CCAAACCTTGGATACATCCCAGACTAGGTTTAATGT...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGTTCACTAACTTCCGATaGTCGAGAAGACCATTCAGT +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERFTNFR*SRRPFS
Trigger: ACTGAATGGTCTTCTCGACCATCGGAAGTTAGTGAA...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTACTTCTGCAGTAGCCTaGAATAAAGCTTCACTAACT +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACTSAVA*NKASLT
Trigger: AGTTAGTGAAGCTTTATTCCAGGCTACTGCAGAAGT...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCGAGCAGCATCAAAATaGTCACTTCTTTTAGTAGCT +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGRAASK*SLLLVA
Trigger: AGCTACTAAAAGAAGTGACCATTTTGATGCTGCTCG...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCCCCTGCAGGCCCTTaGTTAAATATGTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSPAGP*LNMFLP
Trigger: AGGCAGAAACATATTTAACCAAGGGCCTGCAGGGGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGGGAAAAGAAAGTCTaGCAGGGTCTGCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLREKKV*QGLLGK
Trigger: TTTTCCCAGCAGACCCTGCCAGACTTTCTTTTCCCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGTTGGGACAGTCTTCTaGTCAGTCAGTCCAGGAATA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLVGTVF*SVSPGI
Trigger: TATTCCTGGACTGACTGACCAGAAGACTGTCCCAAC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAGTTGCATAACTATCTaGCCACTCCTGTTGATAGAA +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERASCITI*PLLLIE
Trigger: TTCTATCAACAGGAGTGGCCAGATAGTTATGCAACT...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCTCTCCAAATGAGCTaGAAGGGGAGGTTACAGTTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSLQMS*KGRLQL
Trigger: CAACTGTAACCTCCCCTTCCAGCTCATTTGGAGAGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGATGCTCCAGTACACTaGCTACCTTCAGTAACACCA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLDAPVH*LPSVTP
Trigger: TGGTGTTACTGAAGGTAGCCAGTGTACTGGAGCATC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGCTACAATTTGCCCTaGTACTGGGCTCAGAATGAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLCYNLP*YWAQND
Trigger: GTCATTCTGAGCCCAGTACCAGGGCAAATTGTAGCA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATATTGTTCAAGAGAAATaGGAGACGGAAGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANIVQEK*ETEGLK
Trigger: CTTCAGACCTTCCGTCTCCCATTTCTCTTGAACAAT...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATTGGTGTTTATTCATTTaGTCATCTACACCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANWCLFI*SSTPGA
Trigger: AGCGCCAGGTGTAGATGACCAAATGAATAAACACCA...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTCCACTATCCAACTTaGAAGAAGTCTTGGGACAAA +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACFHYPT*KKSWDK
Trigger: TTTGTCCCAAGACTTCTTCCAAGTTGGATAGTGGAA...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTTCCACTATCCAACTTaGAAGAAGTCTTGGGACAAA +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNFHYPT*KKSWDK
Trigger: TTTGTCCCAAGACTTCTTCCAAGTTGGATAGTGGAA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTACTGGTCAATAATTTaGAGGTTGGTTCCAGTGATC +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNYWSII*RLVPVI
Trigger: GATCACTGGAACCAACCTCCAAATTATTGACCAGTA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGGAAGGCTGTACGACTTaGAAATCCAGTGAAGATTTA +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGEGCTT*KSSEDL
Trigger: TAAATCTTCACTGGATTTCCAAGTCGTACAGCCTTC...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGAAGGCTGTACGACTTaGAAATCCAGTGAAGATTTA +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSEGCTT*KSSEDL
Trigger: TAAATCTTCACTGGATTTCCAAGTCGTACAGCCTTC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTAATAGTGTTACTGTCTaGAAGAGAAGGCTGTACGAC +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSNSVTV*KRRLYD
Trigger: GTCGTACAGCCTTCTCTTCCAGACAGTAACACTATT...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTCACTTGTATTTGCCTaGAGGTTACTATCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACSLVFA*RLLSGY
Trigger: ATAGCCAGATAGTAACCTCCAGGCAAATACAAGTGA...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACATGGTTTGCTACCTaGATGTGTCTCCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTWFAT*MCLLLV
Trigger: CACCAGAAGGAGACACATCCAGGTAGCAAACCATGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGACATGGTTTGCTACCTaGATGTGTCTCCTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILTWFAT*MCLLLV
Trigger: CACCAGAAGGAGACACATCCAGGTAGCAAACCATGT...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CACATTGATGCTGAGGCTCTTTATTCTGGTATAATCTGTCTTAGTCTTGTCCATGGGTATTCTCTGCCTTaGAAATCAAATGGAGACTAC +
Preference number: 4 (lower is better)
Translates to: HIDAEALYSGIICLSLVHGYSLP*KSNGDY
Trigger: GTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCC...ATGGACAAGACTAAGACAGATTATACCAGAATAAAGAGCCTCAGCATCAATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR TCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGGCAATTCCTGTGGACTaGAAATATTCGATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQAIPVD*KYSISL
Trigger: GAGAGAAATCGAATATTTTCAGTCCACAGGAATTGC...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGGTCCAGGAATTGTTaGAACCTTCAGCACATCTTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLWSRNC*NLQHIF
Trigger: GAAGATGTGCTGAAGGTTTCAACAATTCCTGGACCA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGGTTTCTCTCGATGTaGAAAGGAACTAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLWFLSM*KGTRKS
Trigger: GCTCTTCCTAGTTCCTTTTCACATCGAGAGAAACCA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTATGGTTTCTCTCGATGTaGAAAGGAACTAGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLWFLSM*KGTRKS
Trigger: GCTCTTCCTAGTTCCTTTTCACATCGAGAGAAACCA...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTACTCTGTCATCAGCCTaGGAATTTAAAAGCACATTA +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACTLSSA*EFKSTL
Trigger: TAATGTGCTTTTAAATTCTCAGGCTGATGACAGAGT...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGACAGATTTGGCTGCTTaGTATTGCCTAAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERTDLAA*YCLRVS
Trigger: AGAAACTCTTAGGCAATATCAAGCAGCCAAATCTGT...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTACAGATTTGGCTGCTTaGTATTGCCTAAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFTDLAA*YCLRVS
Trigger: AGAAACTCTTAGGCAATATCAAGCAGCCAAATCTGT...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAATCAGTTGTTCTTCCATaGCCAAATAACTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKSVVLP*PNNSAL
Trigger: CAAGGCAGAGTTATTTGGTCATGGAAGAACAACTGA...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACAGGAATTCCAAACTTTaGAATGGGAGTTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHRNSKL*NGSCSG
Trigger: ACCAGAACAACTCCCATTTCAAAGTTTGGAATTCCT...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGAGGAATTCCAAACTTTaGAATGGGAGTTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERRNSKL*NGSCSG
Trigger: ACCAGAACAACTCCCATTTCAAAGTTTGGAATTCCT...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTAGTGACTGCATCAGATaGCAATTTTTCAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSSDCIR*QFFRES
Trigger: GCTTTCTCTGAAAAATTGTCATCTGATGCAGTCACT...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCAGTGATTAGCACTTaGACTGAGGCATCTGCATTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPVIST*TEASAF
Trigger: AAATGCAGATGCCTCAGTTCAAGTGCTAATCACTGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTCGGACTCTTCAATATTaGTCTGTAGGGATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: TLFQLVRNGIERKGQMACRTLQY*SVGILY
Trigger: ATAAAGAATCCCTACAGATCAATATTGAAGAGTCCG...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCCGGACTCTTCAATATTaGTCTGTAGGGATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLRTLQY*SVGILY
Trigger: ATAAAGAATCCCTACAGATCAATATTGAAGAGTCCG...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR TCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTGTGTGATTGGATTCTaGAGAATTTTAGCCAAACGA +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNCVIGF*RILAKR
Trigger: TCGTTTGGCTAAAATTCTTCAGAATCCAATCACACA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCCTGGAGAGAATGTGTaGTTGGATTCTGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSPGENV*LDSEEF
Trigger: AAATTCTTCAGAATCCAATCACACATTCTCTCCAGG...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTGTTCAATTTTAATTTaGTTAGACCTCCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLCSILI*LDLPAR
Trigger: TCGAGCTGGGAGGTCTAATCAAATTAAAATTGAACA...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp CACATTGATGCTGAGGCTCTTTATTCTGGTATAATCTGTCTTAGTCTTGTCCATTTGGGTCAATATATCTaGTTCGACAGTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: HIDAEALYSGIICLSLVHLGQYI*FDSRSG
Trigger: ACCACTTCTACTGTCGAATCAGATATATTGACCCAA...ATGGACAAGACTAAGACAGATTATACCAGAATAAAGAGCCTCAGCATCAATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATTTTAATTCGTCTGGGTaGCAAGCATACTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANFNSSG*QAYSFM
Trigger: CATGAAAGAGTATGCTTGTCACCCAGACGAATTAAA...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTTTAATTCGTCTGGGTaGCAAGCATACTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSFNSSG*QAYSFM
Trigger: CATGAAAGAGTATGCTTGTCACCCAGACGAATTAAA...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCAATACTGCCCATATaGACGAGCAGCATCAAAATG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPILPI*TSSIKM
Trigger: CATTTTGATGCTGCTCGTTCATATGGGCAGTATTGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCAACATTCTGAGATCTaGAGAGTGATATTCCGACTC +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTQHSEI*RVIFRL
Trigger: GAGTCGGAATATCACTCTTCAGATCTCAGAATGTTG...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAACATCCTCAACATTCTaGGATCTGAAGAGTGATATT +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQTSSTF*DLKSDI
Trigger: AATATCACTCTTCAGATCTCAGAATGTTGAGGATGT...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGTGGTAGTGATGCCTaGCTTCAAGTTGGATTGAGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSGSDA*LQVGLS
Trigger: ACTCAATCCAACTTGAAGTCAGGCATCACTACCACT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAAGGGACAAGGATAAATaGGATCCAATGTCTGAATCA +
Preference number: 4 (lower is better)
Translates to: IGQGHYAESIAPKPLGILRDKDK*DPMSES
Trigger: TGATTCAGACATTGGATCTCATTTATCCTTGTCCCT...TAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAGTCTCTTCAGTTAGATaGGTATCTGCTAATGTCTTT +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAVSSVR*VSANVF
Trigger: AAAGACATTAGCAGATACTCATCTAACTGAAGAGAC...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTAGATTTCTCGCTATGTaGGTGAGAATTAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTRFLAM*VRIRGH
Trigger: GTGTCCTCTAATTCTCACTCACATAGCGAGAAATCT...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGAGCAGAAGAAACTCTaGGAGCCTCTTCAGGTATTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLEQKKL*EPLQVF
Trigger: AAATACCTGAAGAGGCTCTCAGAGTTTCTTCTGCTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGGCTTCCCCCTATTTaGGTAGCTAGTAGAATGTAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRLPPI*VASRMY
Trigger: GTACATTCTACTAGCTACTCAAATAGGGGGAAGCCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGTACTGGGCTCAGAATaGCTGCCTGTAAAATCTGAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLVLGSE*LPVKSD
Trigger: ATCAGATTTTACAGGCAGTCATTCTGAGCCCAGTAC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGATGGTTTTCAAGTCCTaGGTAATAGTGTTACTGTCT +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGMVFKS*VIVLLS
Trigger: AGACAGTAACACTATTACTCAGGACTTGAAAACCAT...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGAACTAAGGGTAGCTaGTGGAAACTCAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGTKGS*WKLSFL
Trigger: CAGAAAACTGAGTTTCCAGCAGCTACCCTTAGTTCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGGGAACTAAGGGTAGCTaGTGGAAACTCAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILGTKGS*WKLSFL
Trigger: CAGAAAACTGAGTTTCCAGCAGCTACCCTTAGTTCC...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCAGTGCCATATTTTCTaGCTCCATCAAAAGTGTCCG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLQCHIF*LHQKCP
Trigger: CGGACACTTTTGATGGAGGCAGAAAATATGGCACTG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGGGAGCAGGAAAATTaGATCGTTTCAGTGCCATAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGEQEN*IVSVPY
Trigger: ATATGGCACTGAAACGATGCAATTTTCCTGCTCCCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCAATATCCTTCTGTATaGACCTGCTGCTTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLQYPSV*TCCLGF
Trigger: AAAGCCCAAGCAGCAGGTGCATACAGAAGGATATTG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTATCAAATTCGTCTGTGTaGCAATATCCTTCTGTATGC +
Preference number: 4 (lower is better)
Translates to: IGQGHYAESIAPKPLGILSNSSV*QYPSVC
Trigger: GCATACAGAAGGATATTGGCACACAGACGAATTTGA...TAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTACTCCCAATTTTCAATaGCTCTCCGGCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTTPNFQ*LSGISN
Trigger: ATTTGAAATGCCGGAGAGGCATTGAAAATTGGGAGT...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCACATTACAGATTTGGCTaGTTGATATTGCCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: TLSHSFPVGKKWYREERAHYRFG*LILPKS
Trigger: ACTCTTAGGCAATATCAAGCAGCCAAATCTGTAATG...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCACCCTCTTCCTCCCTaGTATCTGTTATACTTGTCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLHPLPP*YLLYLS
Trigger: AGACAAGTATAACAGATAGCAGGGAGGAAGAGGGTG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTACACCCTCTTCCTCCCTaGTATCTGTTATACTTGTCT +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLHPLPP*YLLYLS
Trigger: AGACAAGTATAACAGATAGCAGGGAGGAAGAGGGTG...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAGCTTTCCTCTTCCTCTaGATTTCTGAGTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQAFLFL*ISEYFF
Trigger: AAAGAAATACTCAGAAATGCAGAGGAAGAGGAAAGC...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCAGAAAGGTTGACATaGTTGGCTCTGCATGATGAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLAERLT*LALHDD
Trigger: ATCATCATGCAGAGCCAAGCATGTCAACCTTTCTGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTTTCTTGCTGTGTTTaGTCCGCTTCTCAAGGTATC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLSCCV*SASQGI
Trigger: GATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGCAACTCTTTCACTaGATACAACAGCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMQQLFH*IQQHFH
Trigger: ATGAAAATGCTGTTGTATGCAGTGAAAGAGTTGCTG...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGAGTTTGATGACTGTCTaGGAACTCTTGTTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMSLMTV*ELLLVK
Trigger: TTTTACCAACAAGAGTTCGCAGACAGTCATCAAACT...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCTGCTGGTGGAAAATaGTGGGCTTTTCTCTATGTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPAGGK*WAFLYV
Trigger: AACATAGAGAAAAGCCCAGCATTTTCCACCAGCAGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACTAAGGGTAGCTGCTaGAAACTCAGTTTTCTGGTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTKGSC*KLSFLV
Trigger: GACCAGAAAACTGAGTTTCCAGCAGCTACCCTTAGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACCAGGCTCTATAATTTCATGTCCACGATCTTCAGCATTAATAAAAATCTCAGATGGGATGGAGTCTTCTaGTCATTTGGTCCAATCACA +
Preference number: 4 (lower is better)
Translates to: TRLYNFMSTIFSINKNLRWDGVF*SFGPIT
Trigger: TGTGATTGGACCAAATGACCAGAAGACTCCATCCCA...TCTGAGATTTTTATTAATGCTGAAGATCGTGGACATGAAATTATAGAGCCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGGGATGGAGTCTTCTaGTCATTTGGTCCAATCACA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLWDGVF*SFGPIT
Trigger: TGTGATTGGACCAAATGACCAGAAGACTCCATCCCA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAAAAGCTGTCTGGGATaGAGTCTTCTGGTCATTTGG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLKSCLG*SLLVIW
Trigger: CCAAATGACCAGAAGACTCCATCCCAGACAGCTTTT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGTTATCTATTAGCCTTTaGACATGTTCTGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSLSISL*TCSETS
Trigger: GCTTGTTTCAGAACATGTCCAAAGGCTAATAGATAA...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CCA 90 bp CACATTGATGCTGAGGCTCTTTATTCTGGTATAATCTGTCTTAGTCTTGTCCATAACCATTTCCATCACTaGCATCACTACTTGAATCAC +
Preference number: 4 (lower is better)
Translates to: HIDAEALYSGIICLSLVHNHFHH*HHYLNH
Trigger: GTGATTCAAGTAGTGATGCCAGTGATGGAAATGGTT...ATGGACAAGACTAAGACAGATTATACCAGAATAAAGAGCCTCAGCATCAATGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTCATCTTTTCATCGAATaGCATTCGAAGACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFHLFIE*HSKTFA
Trigger: AGCAAAGGTCTTCGAATGCCATTCGATGAAAAGATG...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTGAAAAAGTAACCTGTTaGACTGAAGATGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFEKVTC*TEDDEA
Trigger: TGCCTCATCATCTTCAGTCCAACAGGTTACTTTTTC...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCATTGGATCCTGAATaGGAGCTTTCAACGGTGGTA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSLDPE*ELSTVV
Trigger: TACCACCGTTGAAAGCTCCCATTCAGGATCCAATGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGAGCAATGGCATCATTaGATCCTGAATGGGAGCTTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLEQWHH*ILNGSF
Trigger: AAAGCTCCCATTCAGGATCCAATGATGCCATTGCTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGAAGTCTGGAGCAATaGCATCATTGGATCCTGAAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGSLEQ*HHWILN
Trigger: ATTCAGGATCCAATGATGCCATTGCTCCAGACTTCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCTTCTGATCCCTTTGTaGATCACTAATTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGLLIPL*ITNLSI
Trigger: AATGGACAAATTAGTGATCCACAAAGGGATCAGAAG...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATCTTCTGATCCCTTTGTaGATCACTAATTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNLLIPL*ITNLSI
Trigger: AATGGACAAATTAGTGATCCACAAAGGGATCAGAAG...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCCTTCTGATCCCTTTGTaGATCACTAATTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLLLIPL*ITNLSI
Trigger: AATGGACAAATTAGTGATCCACAAAGGGATCAGAAG...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCGAGAGAATGTGTGATTaGATTCTGAAGAATTTTAGC +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGERMCD*ILKNFS
Trigger: GCTAAAATTCTTCAGAATCCAATCACACATTCTCTC...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTAGGTATCTCCTCTGTTaGTTGGTGATGCTGCTATAT +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTRYLLC*LVMLLY
Trigger: ATATAGCAGCATCACCAACCAACAGAGGAGATACCT...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCTTTTTCTGTACTTCTaGAAGCTGCTCATAAATCCG +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSLFLYF*KLLINP
Trigger: CGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAG...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTAGAAGAGATCTCTGTTaGGTTCCTTTACTTGATTTT +
Preference number: 4 (lower is better)
Translates to: LTLFQLVRNGIERKGQMARRDLC*VPLLDF
Trigger: AAAATCAAGTAAAGGAACCCAACAGAGATCTCTTCT...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCAGGCGCAAATTCTTaGTCTTGTGTCAAACAGGTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSGANS*SCVKQV
Trigger: GACCTGTTTGACACAAGACCAAGAATTTGCGCCTGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTATCAGGCGCAAATTCTTaGTCTTGTGTCAAACAGGTC +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLSGANS*SCVKQV
Trigger: GACCTGTTTGACACAAGACCAAGAATTTGCGCCTGA...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCAACGATCACAGTCTTTaGGAATTTTCAGTTCATCAA +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGNDHSL*EFSVHQ
Trigger: TTGATGAACTGAAAATTCCCAAAGACTGTGATCGTT...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATGTTTAGGAGCCTTTaGCACAGTGTCAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLMFRSL*HSVRRH
Trigger: ATGTCTCCTGACACTGTGCCAAAGGCTCCTAAACAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAATGTTTAGGAGCCTTTaGCACAGTGTCAGGAGACAT +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLMFRSL*HSVRRH
Trigger: ATGTCTCCTGACACTGTGCCAAAGGCTCCTAAACAT...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCTGATAGAAAGCACTaGGCTTTTCTCCAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLADRKH*AFLQVK
Trigger: CTTCACTTGGAGAAAAGCCCAGTGCTTTCTATCAGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGTCAACAGGTAATTTTTaGCTTTGCCTTCTACCTTCT +
Preference number: 4 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMSTGNF*LCLLPS
Trigger: AGAAGGTAGAAGGCAAAGCCAAAAATTACCTGTTGA...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAATCAACAGGTAATTTTTaGCTTTGCCTTCTACCTTCT +
Preference number: 4 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQSTGNF*LCLLPS
Trigger: AGAAGGTAGAAGGCAAAGCCAAAAATTACCTGTTGA...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTCTTTTACTCCTAGTCTaGAACTCGATCTGTTTACTC +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFLLLLV*NSICLL
Trigger: GAGTAAACAGATCGAGTTCCAGACTAGGAGTAAAAG...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCAAGAAGGAAGGTCTaGAGCTACATAATCCTGATG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLARRKV*SYIILM
Trigger: CATCAGGATTATGTAGCTCCAGACCTTCCTTCTTGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCTGGCGCTTTGCTTTaGCATTGTTCAAGAGAAATG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPGALL*HCSREM
Trigger: CATTTCTCTTGAACAATGCCAAAGCAAAGCGCCAGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCGCAGCATCCAATGAATaGAATCTTTCATCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: SHSFPVGKKWYREERANGAASNE*NLSSKV
Trigger: AACTTTAGATGAAAGATTCCATTCATTGGATGCTGC...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTTACTGGTCAATAATTTaGAGGTTGGTTCCAGTGATC +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFYWSII*RLVPVI
Trigger: GATCACTGGAACCAACCTCCAAATTATTGACCAGTA...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCACTTGTATTTGCCTaGAGGTTACTATCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSSLVFA*RLLSGY
Trigger: ATAGCCAGATAGTAACCTCCAGGCAAATACAAGTGA...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCTGGAACTTGGAGTTaGGAAAGTTATCCCAACATC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLAGTWS*ESYPNI
Trigger: GATGTTGGGATAACTTTCCCAACTCCAAGTTCCAGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
3UTR CAA 72 bp TGGGGTGACCTTCTGATCCCTTTGTGGATCACTAATTaGTCCATTATGTTTTGGATAATCTCTAACTTGACT +
Preference number: 4 (lower is better)
Translates to: WGDLLIPLWITN*SIMFWIISNLT
Trigger: AGTCAAGTTAGAGATTATCCAAAACATAATGGACAAATTAGTGATCCACAAAGGGATCAGAAGGTCACCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGGTCCAATCACAGTTaGAATCTTGGGCTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLWSNHS*NLGLLY
Trigger: ATAGAGAAGCCCAAGATTTCAACTGTGATTGGACCA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGTGGTCCAATCACAGTTaGAATCTTGGGCTTCTCTAT +
Preference number: 4 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILWSNHS*NLGLLY
Trigger: ATAGAGAAGCCCAAGATTTCAACTGTGATTGGACCA...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TTGGTGATGCTGCTATATAATTTAATTCGTCTGGGTGACAAGCATACTCTTTCAGCAATTCCTGTGGACTaGAAATATTCGATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: LVMLLYNLIRLGDKHTLSAIPVD*KYSISL
Trigger: GAGAGAAATCGAATATTTTCAGTCCACAGGAATTGC...TGAAAGAGTATGCTTGTCACCCAGACGAATTAAATTATATAGCAGCATCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCTTTGGACATGTTCTaGAACAAGCTTGTGATTCTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPLDMF*NKLVIL
Trigger: GAGAATCACAAGCTTGTTTCAGAACATGTCCAAAGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGTGAATGGCTGTCTGTaGAGCAAATCACCATTAGAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLVNGCL*SKSPLD
Trigger: ATCTAATGGTGATTTGCTTCACAGACAGCCATTCAC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTACAGATTTGGCTGCTTaGTATTGCCTAAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTTDLAA*YCLRVS
Trigger: AGAAACTCTTAGGCAATATCAAGCAGCCAAATCTGT...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACACTGGCATCACTACTTaGATCACTTTTTATGACAGT +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHTGITT*ITFYDS
Trigger: ACTGTCATAAAAAGTGATTCAAGTAGTGATGCCAGT...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGACTGGCATCACTACTTaGATCACTTTTTATGACAGT +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERTGITT*ITFYDS
Trigger: ACTGTCATAAAAAGTGATTCAAGTAGTGATGCCAGT...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCAAATAACTCTGCCTTaGTCTCTTCTACTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLQITLP*SLLLSS
Trigger: GGAGGAAAGTAGAAGAGATCAAGGCAGAGTTATTTG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCAGTTGTTCTTCCATaGCCAAATAACTCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSVVLP*PNNSAL
Trigger: CAAGGCAGAGTTATTTGGTCATGGAAGAACAACTGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGAATGTCGGTGAGATaGAAAAGTGATGGAGGTAGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRMSVR*KSDGGS
Trigger: ACTACCTCCATCACTTTTTCATCTCACCGACATTCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAATGTTAACAGTGGCTaGGAGGTCATCATCTCTTGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLNVNSG*EVIISC
Trigger: ACAAGAGATGATGACCTCTCAGCCACTGTTAACATT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGCGGACTCTTCAATATTaGTCTGTAGGGATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQRTLQY*SVGILY
Trigger: ATAAAGAATCCCTACAGATCAATATTGAAGAGTCCG...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCATGGCAAATATCTTaGTCACTTGGTAGGTGTACG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSWQIS*SLGRCT
Trigger: CGTACACCTACCAAGTGATCAAGATATTTGCCATGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGTCATGGCAAATATCTTaGTCACTTGGTAGGTGTACG +
Preference number: 4 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILSWQIS*SLGRCT
Trigger: CGTACACCTACCAAGTGATCAAGATATTTGCCATGA...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATCATGTGTACTTTCTaGGACCTGGAGAGAATGTGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLIMCTF*DLERMC
Trigger: ACACATTCTCTCCAGGTCTCAGAAAGTACACATGAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTTGTTCAATTTTAATTTaGTTAGACCTCCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFCSILI*LDLPAR
Trigger: TCGAGCTGGGAGGTCTAATCAAATTAAAATTGAACA...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR TCA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCTGTTCAATTTTAATTTaGTTAGACCTCCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEICSILI*LDLPAR
Trigger: TCGAGCTGGGAGGTCTAATCAAATTAAAATTGAACA...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTGTTCAATTTTAATTTaGTTAGACCTCCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSCSILI*LDLPAR
Trigger: TCGAGCTGGGAGGTCTAATCAAATTAAAATTGAACA...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGAAGAGTCCATTTCTTaGGGAAGACAATGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLEESIS*GRQCQD
Trigger: ATCTTGGCATTGTCTTCCTCAAGAAATGGACTCTTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATTTGGGTTCCTTTACTTaGTTTTCTGATTGCGTCAAT +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANLGSFT*FSDCVN
Trigger: ATTGACGCAATCAGAAAATCAAGTAAAGGAACCCAA...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTCTGCCTGCTTAGATaGATCTTCCTGTGTCCAATA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLFCLLR*IFLCPI
Trigger: TATTGGACACAGGAAGATTCATCTAAGCAGGCAGAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTGAGATCTGAAGAGTaGTATTCCGACTCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLRSEE*YSDSLV
Trigger: AACAAGAGAGTCGGAATATCACTCTTCAGATCTCAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTGAGATCTGAAGAGTaGTATTCCGACTCTCTTGTT +
Preference number: 4 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILLRSEE*YSDSLV
Trigger: AACAAGAGAGTCGGAATATCACTCTTCAGATCTCAG...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCAACATTCTGAGATCTaGAGAGTGATATTCCGACTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLQHSEI*RVIFRL
Trigger: GAGTCGGAATATCACTCTTCAGATCTCAGAATGTTG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATGAGATCCAATGTCTaGATCAACAGGAGTGGTAGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLMRSNV*INRSGS
Trigger: ACTACCACTCCTGTTGATTCAGACATTGGATCTCAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGATTTCTCGCTATGTaGGTGAGAATTAGAGGACAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRFLAM*VRIRGH
Trigger: GTGTCCTCTAATTCTCACTCACATAGCGAGAAATCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGGAGACCACAGTATTaGACTTGGCTTCAACATTTA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGRPQY*TWLQHL
Trigger: TAAATGTTGAAGCCAAGTTCAATACTGTGGTCTCCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAGGGAGACCACAGTATTaGACTTGGCTTCAACATTTA +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLGRPQY*TWLQHL
Trigger: TAAATGTTGAAGCCAAGTTCAATACTGTGGTCTCCC...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTATGGTTTTCAAGTCCTaGGTAATAGTGTTACTGTCT +
Preference number: 4 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSMVFKS*VIVLLS
Trigger: AGACAGTAACACTATTACTCAGGACTTGAAAACCAT...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR TCA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACGTTCTACTATTGCCTTaGTATACTATCTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHVLLLP*YTICCH
Trigger: ATGGCAACAGATAGTATATCAAGGCAATAGTAGAAC...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTGTTCTACTATTGCCTTaGTATACTATCTGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SFPVGKKWYREERANGLFVLLLP*YTICCH
Trigger: ATGGCAACAGATAGTATATCAAGGCAATAGTAGAAC...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCCAGGAACCCCTATTaGTTTCAAAGTTACTTCAGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPRNPY*FQSYFS
Trigger: ACTGAAGTAACTTTGAAAGCAATAGGGGTTCCTGGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCCATTACAGATTTGGCTaGTTGATATTGCCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEIHYRFG*LILPKS
Trigger: ACTCTTAGGCAATATCAAGCAGCCAAATCTGTAATG...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR GCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGAGTGAGGATTCACATTaGAGAAGGTTTTTCACATGT +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERSEDSH*RRFFTC
Trigger: ACATGTGAAAAACCTTCTGCAATGTGAATCCTCACT...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGCAGCACTGGAATCTaGAGTATCTTTCTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSSTGI*SIFLQR
Trigger: TCTTTGCAGAAAGATACTGCAGATTCCAGTGCTGCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTATTCAGCACTTTCTTaGTGTGTTTGCTCCGCTTCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLYSALS*CVCSAS
Trigger: AGAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGAAATATGTTTCTGCCTaGTTAGATGAATCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGKYVSA*LDESSC
Trigger: ACAGGAAGATTCATCTAAGCAGGCAGAAACATATTT...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGAGTTTGATGACTGTCTaGGAACTCTTGTTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: TTLSHSFPVGKKWYREERSLMTV*ELLLVK
Trigger: TTTTACCAACAAGAGTTCGCAGACAGTCATCAAACT...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCAGTTGGTAGAAACTaGCAGACTTTGCTCTATGTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPVGRN*QTLLYV
Trigger: AACATAGAGCAAAGTCTGGCAGTTTCTACCAACTGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTACATATGGGGCTTTaGACTGTTCAAAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLHMGL*TVQRVL
Trigger: GAGAACTCTTTGAACAGTGCAAAGCCCCATATGTAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTACTACATATGGGGCTTTaGACTGTTCAAAGAGTTCTC +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLLHMGL*TVQRVL
Trigger: GAGAACTCTTTGAACAGTGCAAAGCCCCATATGTAG...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTAGATTCTTGATCCTGTaGTACAGGTTTACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTRFLIL*YRFTGQ
Trigger: TTGACCAGTAAACCTGTAGCACAGGATCAAGAATCT...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGAAATCACATGGTTTaGTACCTGGATGTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRNHMV*YLDVSP
Trigger: AGGAGACACATCCAGGTAGCAAACCATGTGATTTCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTAGAGAGAGATACTaGTTTTCCAGTATTCACATC +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQTRERY*FSSIHI
Trigger: GATGTGAATACTGGAAAACCAGTATCTCTCTCTAGT...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATACCTGGCAATTCCTGTaGACTGAAAATATTCGATTT +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANTWQFL*TENIRF
Trigger: AAATCGAATATTTTCAGTCCACAGGAATTGCCAGGT...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGTTACATGACTACCTaGCAATTCCTGTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSYMTT*QFLWTE
Trigger: TTCAGTCCACAGGAATTGCCAGGTAGTCATGTAACT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAAGTTACATGACTACCTaGCAATTCCTGTGGACTGAA +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLSYMTT*QFLWTE
Trigger: TTCAGTCCACAGGAATTGCCAGGTAGTCATGTAACT...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGACTCTGTAAACCCTTaGACAAGTCAGTTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLDSVNP*TSQLFF
Trigger: GAAGAACAACTGACTTGTCCAAGGGTTTACAGAGTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAAATGGGAGTTGTTCTaGTCTAAGGATGCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLKWELF*SKDAER
Trigger: CCTTTCTGCATCCTTAGACCAGAACAACTCCCATTT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCTTTGCGTAGCTTCTaGTTACCAGGCTCTATAATT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLALRSF*LPGSII
Trigger: AATTATAGAGCCTGGTAACCAGAAGCTACGCAAAGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TTGGTGATGCTGCTATATAATTTAATTCGTCTGGGTGACAAGCATACTCTTTCAGAAAAAGTAACCTGTTaGACTGAAGATGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: LVMLLYNLIRLGDKHTLSEKVTC*TEDDEA
Trigger: TGCCTCATCATCTTCAGTCCAACAGGTTACTTTTTC...TGAAAGAGTATGCTTGTCACCCAGACGAATTAAATTATATAGCAGCATCACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATCTTCTGATCCCTTTGTaGATCACTAATTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANLLIPL*ITNLSI
Trigger: AATGGACAAATTAGTGATCCACAAAGGGATCAGAAG...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCGAGAGAATGTGTGATTaGATTCTGAAGAATTTTAGC +
Preference number: 4 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLERMCD*ILKNFS
Trigger: GCTAAAATTCTTCAGAATCCAATCACACATTCTCTC...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGAGAGAATGTGTGATTaGATTCTGAAGAATTTTAGC +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSERMCD*ILKNFS
Trigger: GCTAAAATTCTTCAGAATCCAATCACACATTCTCTC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATGAGAGAATGTGTGATTaGATTCTGAAGAATTTTAGC +
Preference number: 4 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNERMCD*ILKNFS
Trigger: GCTAAAATTCTTCAGAATCCAATCACACATTCTCTC...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGGTATCTCCTCTGTTaGTTGGTGATGCTGCTATAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRYLLC*LVMLLY
Trigger: ATATAGCAGCATCACCAACCAACAGAGGAGATACCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTTTCTGTACTTCTaGAAGCTGCTCATAAATCCG +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTLFLYF*KLLINP
Trigger: CGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAG...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TTGGTGATGCTGCTATATAATTTAATTCGTCTGGGTGACAAGCATACTCTTTCACTTTTTCTGTACTTCTaGAAGCTGCTCATAAATCCG +
Preference number: 4 (lower is better)
Translates to: LVMLLYNLIRLGDKHTLSLFLYF*KLLINP
Trigger: CGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAG...TGAAAGAGTATGCTTGTCACCCAGACGAATTAAATTATATAGCAGCATCACCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTACATTAAACCTAGTCTaGGATGTATCCAAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTTLNLV*DVSKVW
Trigger: CCAAACCTTGGATACATCCCAGACTAGGTTTAATGT...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTCACTAACTTCCGATaGTCGAGAAGACCATTCAGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLFTNFR*SRRPFS
Trigger: ACTGAATGGTCTTCTCGACCATCGGAAGTTAGTGAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATTGTTCAAGAGAAATaGGAGACGGAAGGTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLIVQEK*ETEGLK
Trigger: CTTCAGACCTTCCGTCTCCCATTTCTCTTGAACAAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGGTGTTTATTCATTTaGTCATCTACACCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLWCLFI*SSTPGA
Trigger: AGCGCCAGGTGTAGATGACCAAATGAATAAACACCA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGTGGTGTTTATTCATTTaGTCATCTACACCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILWCLFI*SSTPGA
Trigger: AGCGCCAGGTGTAGATGACCAAATGAATAAACACCA...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTTTCCACTATCCAACTTaGAAGAAGTCTTGGGACAAA +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTFHYPT*KKSWDK
Trigger: TTTGTCCCAAGACTTCTTCCAAGTTGGATAGTGGAA...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGCAGCATCCAATGAATaGAATCTTTCATCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSAASNE*NLSSKV
Trigger: AACTTTAGATGAAAGATTCCATTCATTGGATGCTGC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAATAGTGTTACTGTCTaGAAGAGAAGGCTGTACGAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLNSVTV*KRRLYD
Trigger: GTCGTACAGCCTTCTCTTCCAGACAGTAACACTATT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
3UTR CAA 72 bp TCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTaGGTAGGTGTACGGGATGATGAATGTAAAACTTTG +
Preference number: 4 (lower is better)
Translates to: SFPKIHGKYLDH*VGVRDDECKTL
Trigger: CAAAGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGGCTTCTCTGTATGTaGATAGAAAGAGGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRLLCM*IERGSY
Trigger: GTAACTTCCTCTTTCTATTCACATACAGAGAAGCCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCAATTCCTGTGGACTaGAAATATTCGATTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLAIPVD*KYSISL
Trigger: GAGAGAAATCGAATATTTTCAGTCCACAGGAATTGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACAGATTTGGCTGCTTaGTATTGCCTAAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTDLAA*YCLRVS
Trigger: AGAAACTCTTAGGCAATATCAAGCAGCCAAATCTGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTTAGCATGATTCAGTaGGGATTCACATTGCAGAAG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLFSMIQ*GFTLQK
Trigger: CTTCTGCAATGTGAATCCTCACTGAATCATGCTAAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTCTCAATAATAATGTaGCTACATACAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLSIIM*LHTASG
Trigger: GCCAGAAGCTGTATGTAGTCACATTATTATTGAGAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTACTCTCAATAATAATGTaGCTACATACAGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLLSIIM*LHTASG
Trigger: GCCAGAAGCTGTATGTAGTCACATTATTATTGAGAG...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGGAATTCCAAACTTTaGAATGGGAGTTGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRNSKL*NGSCSG
Trigger: ACCAGAACAACTCCCATTTCAAAGTTTGGAATTCCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGTGACTGCATCAGATaGCAATTTTTCAGAGAAAGC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSDCIR*QFFRES
Trigger: GCTTTCTCTGAAAAATTGTCATCTGATGCAGTCACT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTGTTGTTATCTGAGTaGCTGCATCAGATGACAATT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLLLSE*LHQMTI
Trigger: AATTGTCATCTGATGCAGTCACTCAGATAACAACAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTACTGTTGTTATCTGAGTaGCTGCATCAGATGACAATT +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLLLLSE*LHQMTI
Trigger: AATTGTCATCTGATGCAGTCACTCAGATAACAACAG...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp TTGGTGATGCTGCTATATAATTTAATTCGTCTGGGTGACAAGCATACTCTTTCATGTGTGATTGGATTCTaGAGAATTTTAGCCAAACGA +
Preference number: 4 (lower is better)
Translates to: LVMLLYNLIRLGDKHTLSCVIGF*RILAKR
Trigger: TCGTTTGGCTAAAATTCTTCAGAATCCAATCACACA...TGAAAGAGTATGCTTGTCACCCAGACGAATTAAATTATATAGCAGCATCACCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAATGTGTGATTGGATTCTaGAGAATTTTAGCCAAACGA +
Preference number: 4 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKCVIGF*RILAKR
Trigger: TCGTTTGGCTAAAATTCTTCAGAATCCAATCACACA...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCTGGAGAGAATGTGTaGTTGGATTCTGAAGAATTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPGENV*LDSEEF
Trigger: AAATTCTTCAGAATCCAATCACACATTCTCTCCAGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTGGGTCAATATATCTaGTTCGACAGTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLGQYI*FDSRSG
Trigger: ACCACTTCTACTGTCGAATCAGATATATTGACCCAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGTTGGGTCAATATATCTaGTTCGACAGTAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILLGQYI*FDSRSG
Trigger: ACCACTTCTACTGTCGAATCAGATATATTGACCCAA...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTTAATTCGTCTGGGTaGCAAGCATACTCTTTCATG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLFNSSG*QAYSFM
Trigger: CATGAAAGAGTATGCTTGTCACCCAGACGAATTAAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTTCTCCCCAGAAGTTaGTTGGTCACTCTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLFLPRS*LVTLFL
Trigger: TAAAAAGAGAGTGACCAATCAACTTCTGGGGAGAAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGGGACAAGGATAAATaGGATCCAATGTCTGAATCA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRDKDK*DPMSES
Trigger: TGATTCAGACATTGGATCTCATTTATCCTTGTCCCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTAATGTCTTTTGGTTaGGAGTATCAGTGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLMSFG*EYQCVD
Trigger: GTCAACACACTGATACTCTCAACCAAAAGACATTAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACTATCTGGCTATTCTaGGAAGGTATGGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTIWLF*EGMVFK
Trigger: CTTGAAAACCATACCTTCTCAGAATAGCCAGATAGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATTGCATCGTTTCAGTaGCATATTTTCTGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLIASFQ*HIFCLH
Trigger: ATGGAGGCAGAAAATATGGCACTGAAACGATGCAAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCAAATTCGTCTGTGTaGCAATATCCTTCTGTATGC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSNSSV*QYPSVC
Trigger: GCATACAGAAGGATATTGGCACACAGACGAATTTGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACTCCCAATTTTCAATaGCTCTCCGGCATTTCAAAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTPNFQ*LSGISN
Trigger: ATTTGAAATGCCGGAGAGGCATTGAAAATTGGGAGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGATTCTTGATCCTGTaGTACAGGTTTACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRFLIL*YRFTGQ
Trigger: TTGACCAGTAAACCTGTAGCACAGGATCAAGAATCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATGTTCACTTGTATTTaGCTGGAGGTTACTATCTGG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLMFTCI*LEVTIW
Trigger: CCAGATAGTAACCTCCAGGCAAATACAAGTGAACAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAATGTTCACTTGTATTTaGCTGGAGGTTACTATCTGG +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLMFTCI*LEVTIW
Trigger: CCAGATAGTAACCTCCAGGCAAATACAAGTGAACAT...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGAAACTCAGTTTTCTaGTCATCTGGTATATGCACA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGNSVF*SSGICT
Trigger: TGTGCATATACCAGATGACCAGAAAACTGAGTTTCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGTTATCTATTAGCCTTTaGACATGTTCTGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: AESIAPKPLGILITTLFQLSISL*TCSETS
Trigger: GCTTGTTTCAGAACATGTCCAAAGGCTAATAGATAA...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATTTATCTATTAGCCTTTaGACATGTTCTGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: LSHSFPVGKKWYREERANLSISL*TCSETS
Trigger: GCTTGTTTCAGAACATGTCCAAAGGCTAATAGATAA...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAACCATTTCCATCACTaGCATCACTACTTGAATCAC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLNHFHH*HHYLNH
Trigger: GTGATTCAAGTAGTGATGCCAGTGATGGAAATGGTT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCATCTTTTCATCGAATaGCATTCGAAGACCTTTGCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLHLFIE*HSKTFA
Trigger: AGCAAAGGTCTTCGAATGCCATTCGATGAAAAGATG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGAAAAAGTAACCTGTTaGACTGAAGATGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLEKVTC*TEDDEA
Trigger: TGCCTCATCATCTTCAGTCCAACAGGTTACTTTTTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTCTGATCCCTTTGTaGATCACTAATTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTLLIPL*ITNLSI
Trigger: AATGGACAAATTAGTGATCCACAAAGGGATCAGAAG...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTTTTTCTGTACTTCTaGAAGCTGCTCATAAATCCG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLFLYF*KLLINP
Trigger: CGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACATTAAACCTAGTCTaGGATGTATCCAAGGTTTGG +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTLNLV*DVSKVW
Trigger: CCAAACCTTGGATACATCCCAGACTAGGTTTAATGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACTTCTGCAGTAGCCTaGAATAAAGCTTCACTAACT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTSAVA*NKASLT
Trigger: AGTTAGTGAAGCTTTATTCCAGGCTACTGCAGAAGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAACTTCTGCAGTAGCCTaGAATAAAGCTTCACTAACT +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLTSAVA*NKASLT
Trigger: AGTTAGTGAAGCTTTATTCCAGGCTACTGCAGAAGT...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCGAGCAGCATCAAAATaGTCACTTCTTTTAGTAGCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRAASK*SLLLVA
Trigger: AGCTACTAAAAGAAGTGACCATTTTGATGCTGCTCG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGTTGCATAACTATCTaGCCACTCCTGTTGATAGAA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSCITI*PLLLIE
Trigger: TTCTATCAACAGGAGTGGCCAGATAGTTATGCAACT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTTTTACTCCTAGTCTaGAACTCGATCTGTTTACTC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLLLLV*NSICLL
Trigger: GAGTAAACAGATCGAGTTCCAGACTAGGAGTAAAAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTCCACTATCCAACTTaGAAGAAGTCTTGGGACAAA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLFHYPT*KKSWDK
Trigger: TTTGTCCCAAGACTTCTTCCAAGTTGGATAGTGGAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTACTGGTCAATAATTTaGAGGTTGGTTCCAGTGATC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLYWSII*RLVPVI
Trigger: GATCACTGGAACCAACCTCCAAATTATTGACCAGTA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGAAGGCTGTACGACTTaGAAATCCAGTGAAGATTTA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLEGCTT*KSSEDL
Trigger: TAAATCTTCACTGGATTTCCAAGTCGTACAGCCTTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAGAAGGCTGTACGACTTaGAAATCCAGTGAAGATTTA +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLEGCTT*KSSEDL
Trigger: TAAATCTTCACTGGATTTCCAAGTCGTACAGCCTTC...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCACTTGTATTTGCCTaGAGGTTACTATCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSLVFA*RLLSGY
Trigger: ATAGCCAGATAGTAACCTCCAGGCAAATACAAGTGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACTCTGTCATCAGCCTaGGAATTTAAAAGCACATTA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTLSSA*EFKSTL
Trigger: TAATGTGCTTTTAAATTCTCAGGCTGATGACAGAGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACTGGCATCACTACTTaGATCACTTTTTATGACAGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTGITT*ITFYDS
Trigger: ACTGTCATAAAAAGTGATTCAAGTAGTGATGCCAGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCGGACTCTTCAATATTaGTCTGTAGGGATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRTLQY*SVGILY
Trigger: ATAAAGAATCCCTACAGATCAATATTGAAGAGTCCG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGTGTGATTGGATTCTaGAGAATTTTAGCCAAACGA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLCVIGF*RILAKR
Trigger: TCGTTTGGCTAAAATTCTTCAGAATCCAATCACACA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGTTCAATTTTAATTTaGTTAGACCTCCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLCSILI*LDLPAR
Trigger: TCGAGCTGGGAGGTCTAATCAAATTAAAATTGAACA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTGGGTTCCTTTACTTaGTTTTCTGATTGCGTCAAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLGSFT*FSDCVN
Trigger: ATTGACGCAATCAGAAAATCAAGTAAAGGAACCCAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACATCCTCAACATTCTaGGATCTGAAGAGTGATATT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTSSTF*DLKSDI
Trigger: AATATCACTCTTCAGATCTCAGAATGTTGAGGATGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGTCTCTTCAGTTAGATaGGTATCTGCTAATGTCTTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLVSSVR*VSANVF
Trigger: AAAGACATTAGCAGATACTCATCTAACTGAAGAGAC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGTTCTTCAGTGAAATaGGAATTAAATACCCCCACA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLCSSVK*ELNTPT
Trigger: TGTGGGGGTATTTAATTCTCATTTCACTGAAGAACA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR TCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATGGTTTTCAAGTCCTaGGTAATAGTGTTACTGTCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLMVFKS*VIVLLS
Trigger: AGACAGTAACACTATTACTCAGGACTTGAAAACCAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCATTACAGATTTGGCTaGTTGATATTGCCTAAGAGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLHYRFG*LILPKS
Trigger: ACTCTTAGGCAATATCAAGCAGCCAAATCTGTAATG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGTGAGGATTCACATTaGAGAAGGTTTTTCACATGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSEDSH*RRFFTC
Trigger: ACATGTGAAAAACCTTCTGCAATGTGAATCCTCACT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCTTTCCTCTTCCTCTaGATTTCTGAGTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLAFLFL*ISEYFF
Trigger: AAAGAAATACTCAGAAATGCAGAGGAAGAGGAAAGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCAGCAACTCTTTCACTaGATACAACAGCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLQQLFH*IQQHFH
Trigger: ATGAAAATGCTGTTGTATGCAGTGAAAGAGTTGCTG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGTTTGATGACTGTCTaGGAACTCTTGTTGGTAAAA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSLMTV*ELLLVK
Trigger: TTTTACCAACAAGAGTTCGCAGACAGTCATCAAACT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACTAGAGAGAGATACTaGTTTTCCAGTATTCACATC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTRERY*FSSIHI
Trigger: GATGTGAATACTGGAAAACCAGTATCTCTCTCTAGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACCTGGCAATTCCTGTaGACTGAAAATATTCGATTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTWQFL*TENIRF
Trigger: AAATCGAATATTTTCAGTCCACAGGAATTGCCAGGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTTCTGATCCCTTTGTaGATCACTAATTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLLIPL*ITNLSI
Trigger: AATGGACAAATTAGTGATCCACAAAGGGATCAGAAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTAGAAGAGATCTCTGTTaGGTTCCTTTACTTGATTTT +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTRRDLC*VPLLDF
Trigger: AAAATCAAGTAAAGGAACCCAACAGAGATCTCTTCT...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCAACAGGTAATTTTTaGCTTTGCCTTCTACCTTCT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSTGNF*LCLLPS
Trigger: AGAAGGTAGAAGGCAAAGCCAAAAATTACCTGTTGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTGCAGCATCCAATGAATaGAATCTTTCATCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: ESIAPKPLGILITTLFQTAASNE*NLSSKV
Trigger: AACTTTAGATGAAAGATTCCATTCATTGGATGCTGC...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR GCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAAATATGTTTCTGCCTaGTTAGATGAATCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLKYVSA*LDESSC
Trigger: ACAGGAAGATTCATCTAAGCAGGCAGAAACATATTT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR GCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAAAATATGTTTCTGCCTaGTTAGATGAATCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLKYVSA*LDESSC
Trigger: ACAGGAAGATTCATCTAAGCAGGCAGAAACATATTT...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTATCTATTAGCCTTTaGACATGTTCTGAAACAAGC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLSISL*TCSETS
Trigger: GCTTGTTTCAGAACATGTCCAAAGGCTAATAGATAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGAGAGAATGTGTGATTaGATTCTGAAGAATTTTAGC +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLERMCD*ILKNFS
Trigger: GCTAAAATTCTTCAGAATCCAATCACACATTCTCTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAGAGAGAATGTGTGATTaGATTCTGAAGAATTTTAGC +
Preference number: 4 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLERMCD*ILKNFS
Trigger: GCTAAAATTCTTCAGAATCCAATCACACATTCTCTC...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGAAGAGATCTCTGTTaGGTTCCTTTACTTGATTTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRRDLC*VPLLDF
Trigger: AAAATCAAGTAAAGGAACCCAACAGAGATCTCTTCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAACGATCACAGTCTTTaGGAATTTTCAGTTCATCAA +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLNDHSL*EFSVHQ
Trigger: TTGATGAACTGAAAATTCCCAAAGACTGTGATCGTT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CCA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGAACGATCACAGTCTTTaGGAATTTTCAGTTCATCAA +
Preference number: 4 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILNDHSL*EFSVHQ
Trigger: TTGATGAACTGAAAATTCCCAAAGACTGTGATCGTT...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CCA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCAGCATCCAATGAATaGAATCTTTCATCTAAAGTT +
Preference number: 4 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLAASNE*NLSSKV
Trigger: AACTTTAGATGAAAGATTCCATTCATTGGATGCTGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS CCA 90 bp CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCAGCTCGCCCGGCCATaGCAGATCCTCGGGCTCCATGTTGGTGTCTCGCTCTGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: LLLLLLLLLLQLARP*QILGLHVGVSLWAA
Trigger: TGCCGCCCAGAGCGAGACACCAACATGGAGCCCGAGGATCTGCCATGGCCGGGCGAGCTGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp CAGGGCCTGCTCTTGGATCCAGCCTCCCAGGAAGCCTTCTCGGTGGATGACTGGGTGGATGACTGGCCCTaGCCAATCTTTGTACTGGGG +
Preference number: 5 (lower is better)
Translates to: QGLLLDPASQEAFSVDDWVDDWP*PIFVLG
Trigger: CCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCAC...CCAGTCATCCACCGAGAAGGCTTCCTGGGAGGCTGGATCCAAGAGCAGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR CAA 90 bp GAAGCCTTCTCGGTGGATGACTGGCCCTTGCCAATCTTTGTACTGGGGTTTGCTAGCTCTGAACCGTGCTaGAGGGCAGGGCCTGCTCTT +
Preference number: 5 (lower is better)
Translates to: EAFSVDDWPLPIFVLGFASSEPC*RAGPAL
Trigger: AAGAGCAGGCCCTGCCCTCAAGCACGGTTCAGAGCT...AGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR CAA 90 bp TTCTCCCACTGGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTCGCCAGGAAGACTCTCTaGGGCAGCGGGCACATGCGA +
Preference number: 5 (lower is better)
Translates to: FSHWQGCLSHYPLTVDSFARKTL*GSGHMR
Trigger: TCGCATGTGCCCGCTGCCCAAGAGAGTCTTCCTGGC...GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS GCA 90 bp GAAATGGCACCAGTGAAAGGACAGAAATCGGGGAGGTTACCAGGGTaGAGAGTCATGAGATCTCCTCTCATCATCCCTCCCTATACCTCC +
Preference number: 5 (lower is better)
Translates to: EMAPVKGQKSGRLPG*RVMRSPLIIPPYTS
Trigger: GGAGGTATAGGGAGGGATGATGAGAGGAGATCTCATGACTCTGCACCCTGGTAACCTCCCCGATTTCTGTCCTTTCACTGGTGCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683108.1
ENST00000683147.1
CDS CCA 90 bp CAAATCCATAGAAACAGAAAGTCATTAGTGGTTGCCTGCAGGCTGTaGCAGAGGTGGGAGGCTGGATGTGTCTCCTTCTGGTGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: QIHRNRKSLVVACRL*QRWEAGCVSFWCAQ
Trigger: CTGAGCACACCAGAAGGAGACACATCCAGCCTCCCACCTCTGCCACAGCCTGCAGGCAACCACTAATGACTTTCTGTTTCTATGGATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684656.1
CDS GCA 90 bp GATGCAGAAAGGTTGACATGCTTGGCTCTGCATGATGATGGGTTCTaGCGTCCTCTGGTCATTTCTGAGGGTCCAGCAGATCTGAAAGCA +
Preference number: 5 (lower is better)
Translates to: DAERLTCLALHDDGF*RPLVISEGPADLKA
Trigger: TGCTTTCAGATCTGCTGGACCCTCAGAAATGACCAGAGGACGGCAGAACCCATCATCATGCAGAGCCAAGCATGTCAACCTTTCTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS GCA 90 bp CAGAATAGGCAAATCCATAGAAACAGAAAGTCATTAGTGGTTGCCTaGAGGCTGTGGCAGAGGTGGGAGGCTGGATGTGTCTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: QNRQIHRNRKSLVVA*RLWQRWEAGCVSFW
Trigger: CCAGAAGGAGACACATCCAGCCTCCCACCTCTGCCACAGCCTGCAGGCAACCACTAATGACTTTCTGTTTCTATGGATTTGCCTATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684656.1
CDS-3UTR CAA 90 bp TTCTCCCACTGGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTCCATACAGCTTCTGGCTaGCATCCCATTCCCCGTGGA +
Preference number: 5 (lower is better)
Translates to: FSHWQGCLSHYPLTVDSFHTASG*HPIPRG
Trigger: TCCACGGGGAATGGGATGCAAGCCAGAAGCTGTATG...GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CAA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCAACGGTGGTATCTGATTaGGAATCCGGAGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSTVVSD*ESGDGG
Trigger: TCCTCCATCTCCGGATTCCAAATCAGATACCACCGT...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCACCTCAGTCACTGCCCTaGTACTGTGAATCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSPQSLP*YCESLA
Trigger: AGCAAGAGATTCACAGTACAAGGGCAGTGACTGAGG...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS TCA 90 bp ATGTTAACAGTGGCTGAGAGGTCATCATCTCTTGTGCCTAGCACCTaGGCTGGGAAGTCTGGAGCAATGGCATCATTGGATCCATCTGTG +
Preference number: 5 (lower is better)
Translates to: MLTVAERSSSLVPST*AGKSGAMASLDPSV
Trigger: CACAGATGGATCCAATGATGCCATTGCTCCAGACTTCCCAGCTCAGGTGCTAGGCACAAGAGATGATGACCTCTCAGCCACTGTTAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000651057.1
ENST00000684656.1
CDS-3UTR CAA 90 bp CAAAGATTCTTTTTCTTTAGCCTGGGCAGCCTCAGTCACTGCCCTTGTACTGTGAGTGTGCTGAGTTGTTaGCTCTGGGGTGACCTTCTG +
Preference number: 5 (lower is better)
Translates to: QRFFFFSLGSLSHCPCTVSVLSC*LWGDLL
Trigger: CAGAAGGTCACCCCAGAGCAAACAACTCAGCACACT...CACAGTACAAGGGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGAATCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp GTTGTCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTTCATGGCCAAAAGCTaGAATCAGCCGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: VVYHSIPSHFVPLCYHHVFMAKS*NQPGSV
Trigger: GACACTGCCCGGCTGATTCAAGCTTTTGGCCATGAA...CACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCAGTATTCAGCACTTTCTaGCTGTGTTTGCTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSVFSTF*LCLLRF
Trigger: GAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATAC...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATGCCAGGAAGACTCTCTaGGGCAGCGGGCACATGCGA +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNARKTL*GSGHMR
Trigger: TCGCATGTGCCCGCTGCCCAAGAGAGTCTTCCTGGC...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp GAAGCCTTCTCGGTGGATGACTGGCCCTTGCCAATCTTTGTACTGGGGTTTGCTCTGAGGAAAATAAACTaGTGTCAGTCCCAGGGAACT +
Preference number: 5 (lower is better)
Translates to: EAFSVDDWPLPIFVLGFALRKIN*CQSQGT
Trigger: AGTTCCCTGGGACTGACACAAGTTTATTTTCCTCAG...AGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATCCACCGAGAAGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR CAA 90 bp GATGACTGGCCCTTGCCAATCTTTGTACTGGGGTTTGCTGAACTTAGAGTGAGGGGGAAGAACTATGAGTaGACCTCATGCACCATGGGT +
Preference number: 5 (lower is better)
Translates to: DDWPLPIFVLGFAELRVRGKNYE*TSCTMG
Trigger: ACCCATGGTGCATGAGGTCAACTCATAGTTCTTCCC...CCTCACTCTAAGTTCAGCAAACCCCAGTACAAAGATTGGCAAGGGCCAGTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS TCA 90 bp GGAGGGCTCTGCGGGAAACACATTAGAGAAGGTGAAGGTGTCTCCTaGAGGCCACTCTGGAACAAGTGCTTCCAAATAAAAGAGCTATGT +
Preference number: 5 (lower is better)
Translates to: GGLCGKHIREGEGVS*RPLWNKCFQIKELC
Trigger: ACATAGCTCTTTTATTTGGAAGCACTTGTTCCAGAGTGGCCTTCAGGAGACACCTTCACCTTCTCTAATGTGTTTCCCGCAGAGCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683147.1
CDS-3UTR CAA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTGATGATGAGGCAAACTaGACAGGAGCTTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIDDEAN*TGALRS
Trigger: GCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCATC...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGCCTCAGTCACTGCCCTaGTACTGTGAATCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: ELRHLHFHSARVFLPLARPQSLP*YCESLA
Trigger: AGCAAGAGATTCACAGTACAAGGGCAGTGACTGAGG...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTGGGATTCTTTATTGTTaGGCCAGGCTTCCTCGGGAA +
Preference number: 5 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIGILYC*ARLPRE
Trigger: TTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCC...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATAGTGTGCTGAGTTGTTaGCTCTGGGGTGACCTTCTG +
Preference number: 5 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNSVLSC*LWGDLL
Trigger: CAGAAGGTCACCCCAGAGCAAACAACTCAGCACACT...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp AACTCAGGCTGTCTCTGTTGCCTCTGTCGCTCCCGATACTTGTTCCACAGTTCAACTTTCTTGCTGTGTTaGCTCCGCTTCTCAAGGTAT +
Preference number: 5 (lower is better)
Translates to: NSGCLCCLCRSRYLFHSSTFLLC*LRFSRY
Trigger: ATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAGT...TGAACTGTGGAACAAGTATCGGGAGCGACAGAGGCAACAGAGACAGCCTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS TCA 90 bp ATGGGTTCTGCCGTCCTCTGGTCATTTCTGAGGGTCCAGCAGATCTaGAAGCACAAGGGTGTCTATCTAGTTGTGGATGTTCAGAAGTTA +
Preference number: 5 (lower is better)
Translates to: MGSAVLWSFLRVQQI*KHKGVYLVVDVQKL
Trigger: TAACTTCTGAACATCCACAACTAGATAGACACCCTTGTGCTTTCAGATCTGCTGGACCCTCAGAAATGACCAGAGGACGGCAGAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS TCA 90 bp CCTAGCAGTGGAGAACAGAAGAGATCTCTGTTGGGTTCCTTTACTTaGTTTTCTGATTGCGTCAATATGCCCTCCTCCAGAGAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: PSSGEQKRSLLGSFT*FSDCVNMPSSREGK
Trigger: CTTCCCCTCTCTGGAGGAGGGCATATTGACGCAATCAGAAAATCAAGTAAAGGAACCCAACAGAGATCTCTTCTGTTCTCCACTGCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS GCA 90 bp ACTCCCAATTTTCAATGCCTCTCCGGCATTTCAAATTCGTCTGTGTaGCAATATCCTTCTGTATGCACCTGCTGCTTGGGCTTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: TPNFQCLSGISNSSV*QYPSVCTCCLGFPL
Trigger: CAGAGGAAAGCCCAAGCAGCAGGTGCATACAGAAGGATATTGGCACACAGACGAATTTGAAATGCCGGAGAGGCATTGAAAATTGGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000651434.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684197.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS GCA 90 bp TTGAAATGGGAGTTGTTCTGGTCTAAGGATGCAGAAAGGTTGACATaGTTGGCTCTGCATGATGATGGGTTCTGCCGTCCTCTGGTCATT +
Preference number: 5 (lower is better)
Translates to: LKWELFWSKDAERLT*LALHDDGFCRPLVI
Trigger: AATGACCAGAGGACGGCAGAACCCATCATCATGCAGAGCCAAGCATGTCAACCTTTCTGCATCCTTAGACCAGAACAACTCCCATTTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CCA 90 bp ATGGCATCATTGGATCCATCTGTGCCGCGAGAAAAAGTAACCTGTTaGACTGAAGATGATGAGGCAAACTTGACAGGAGCTTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: MASLDPSVPREKVTC*TEDDEANLTGALRS
Trigger: GCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCATCTTCAGTCCAACAGGTTACTTTTTCTCGCGGCACAGATGGATCCAATGATGCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684656.1
CDS CCA 90 bp AACCTTTGCCACCAAGGAACAATTGGTACAGTTCCTCTTTGGTCTTaGCACAGAGAAGCAGTCTTAAACCTCCGTAACAGTCCTTCACCC +
Preference number: 5 (lower is better)
Translates to: NLCHQGTIGTVPLWS*HREAVLNLRNSPSP
Trigger: GGGTGAAGGACTGTTACGGAGGTTTAAGACTGCTTCTCTGTGCCAAGACCAAAGAGGAACTGTACCAATTGTTCCTTGGTGGCAAAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS-3UTR CAA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGCATACAGCTTCTGGCTaGCATCCCATTCCCCGTGGA +
Preference number: 5 (lower is better)
Translates to: HSFPVGKKWYREERANGLHTASG*HPIPRG
Trigger: TCCACGGGGAATGGGATGCAAGCCAGAAGCTGTATG...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATACGGTGGTATCTGATTaGGAATCCGGAGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNTVVSD*ESGDGG
Trigger: TCCTCCATCTCCGGATTCCAAATCAGATACCACCGT...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAATGTAGGGATTCTTTATaGTTTGGCCAGGCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQCRDSL*FGQASS
Trigger: CGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACA...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCTGTAGGGATTCTTTATaGTTTGGCCAGGCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPCRDSL*FGQASS
Trigger: CGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACA...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCGACAGTGCCGGAAAGGATGTaGGTGGTAGTATCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LSCRATSLSVWVNISDSTVPERM*VVVSVS
Trigger: GCTCACAGATACTACCACCAACATCCTTTCCGGCAC...TGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGGTATTCAGCACTTTCTaGCTGTGTTTGCTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: ELRHLHFHSARVFLPLARVFSTF*LCLLRF
Trigger: GAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATAC...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp AGGGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCCTGAGGAAAATAAACTaGTGTCAGTCCCAGGGAACT +
Preference number: 5 (lower is better)
Translates to: RGYSLPWKSNGDYMQTGGLRKIN*CQSQGT
Trigger: AGTTCCCTGGGACTGACACAAGTTTATTTTCCTCAG...GCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGCCCTGACTGGCGGTaGTGGCCCAGCTTAGGCGCA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSPDWR*WPSLGA
Trigger: TGCGCCTAAGCTGGGCCACAACCGCCAGTCAGGGCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484298.5
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCCTCGGGCTCCATGTaGGTGTCTCGCTCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSSGSM*VSRSGR
Trigger: CCGCCCAGAGCGAGACACCAACATGGAGCCCGAGGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTATCCTCGGGCTCCATGTaGGTGTCTCGCTCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLSSGSM*VSRSGR
Trigger: CCGCCCAGAGCGAGACACCAACATGGAGCCCGAGGA...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTCTGCACGTGGGGCTTaGCTTTGTTCAAAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNSARGA*LCSKSS
Trigger: AGAGCTCTTTGAACAAAGCAAAGCCCCACGTGCAGA...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATCTAATGTACAGTGATTaGGGGCTGACTGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNLMYSD*GLTGRP
Trigger: TGGTCTCCCAGTCAGCCCCAAATCACTGTACATTAG...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS TCA 90 bp ACTAGCAGTGGAGAACAGAAGAGATCTCTGTTGGGTTCCTTTACTTaGTTTTCTGATTGCGTCAATATGCCCTCCTCCAGAGAGGGGAAG +
Preference number: 5 (lower is better)
Translates to: TSSGEQKRSLLGSFT*FSDCVNMPSSREGK
Trigger: CTTCCCCTCTCTGGAGGAGGGCATATTGACGCAATCAGAAAATCAAGTAAAGGAACCCAACAGAGATCTCTTCTGTTCTCCACTGCTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000682565.1
ENST00000682675.1
ENST00000682801.1
ENST00000682859.1
ENST00000682889.1
ENST00000684548.1
CDS GCA 90 bp GATCTCTGTTGGGTTCCTTTACTTGATTTTCTGATTGCGTCAATATaGCCTCCTCCAGAGAGGGGAAGTCTGTCACTTCAGTATCTTCCG +
Preference number: 5 (lower is better)
Translates to: DLCWVPLLDFLIASI*PPPERGSLSLQYLP
Trigger: CGGAAGATACTGAAGTGACAGACTTCCCCTCTCTGGAGGAGGGCATATTGACGCAATCAGAAAATCAAGTAAAGGAACCCAACAGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000682565.1
ENST00000682675.1
ENST00000682801.1
ENST00000682859.1
ENST00000682889.1
ENST00000684148.1
ENST00000684548.1
CDS-3UTR CAA 90 bp CAAAGATTCTTTTTCTTTAGCCTGGGCAGCCTCAGTCACTGCCCTTGTACTGTGAATGCCATACTGACTTaGCTCTCTGCTTCCTGTAGA +
Preference number: 5 (lower is better)
Translates to: QRFFFFSLGSLSHCPCTVNAILT*LSASCR
Trigger: TCTACAGGAAGCAGAGAGCAAAGTCAGTATGGCATT...CACAGTACAAGGGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGAATCTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp CACTCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGAGAGGTCATCATCTCTaGTGCCTAGCACCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: HSFPKIHGKYLDHLVGVRRGHHL*CLAPEL
Trigger: CAGCTCAGGTGCTAGGCACAAGAGATGATGACCTCT...CCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGAGAGGTCATCATCTCTaGTGCCTAGCACCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: HSFPVGKKWYREERANGLRGHHL*CLAPEL
Trigger: CAGCTCAGGTGCTAGGCACAAGAGATGATGACCTCT...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAGACCTTCTGATCCCTTaGTGGATCACTAATTTGTCC +
Preference number: 5 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGDLLIP*WITNLS
Trigger: GGACAAATTAGTGATCCACAAAGGGATCAGAAGGTC...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCAGTGTGCTGAGTTGTTaGCTCTGGGGTGACCTTCTG +
Preference number: 5 (lower is better)
Translates to: SHSFPVGKKWYREERANGSVLSC*LWGDLL
Trigger: CAGAAGGTCACCCCAGAGCAAACAACTCAGCACACT...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp GTTGTCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTGTCGCTCCCGATACTaGTTCCACAGTTCATTCAAA +
Preference number: 5 (lower is better)
Translates to: VVYHSIPSHFVPLCYHHVCRSRY*FHSSFK
Trigger: TTTGAATGAACTGTGGAACAAGTATCGGGAGCGACA...CACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTTTCATGGCCAAAAGCTaGAATCAGCCGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: SILICRDSLLFGQASSGTFMAKS*NQPGSV
Trigger: GACACTGCCCGGCTGATTCAAGCTTTTGGCCATGAA...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTTCATGGCCAAAAGCTaGAATCAGCCGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAFMAKS*NQPGSV
Trigger: GACACTGCCCGGCTGATTCAAGCTTTTGGCCATGAA...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGGCGATTCCTGAAGGGTaGCTCTCACAAATGGCCTCA +
Preference number: 5 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQAIPEG*LSQMAS
Trigger: TGAGGCCATTTGTGAGAGCAACCCTTCAGGAATCGC...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCCAGGAAGACTCTCTaGGGCAGCGGGCACATGCGA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLARKTL*GSGHMR
Trigger: TCGCATGTGCCCGCTGCCCAAGAGAGTCTTCCTGGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAGCCAGGAAGACTCTCTaGGGCAGCGGGCACATGCGA +
Preference number: 5 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLARKTL*GSGHMR
Trigger: TCGCATGTGCCCGCTGCCCAAGAGAGTCTTCCTGGC...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCATCAGGCGCAAATTCTaGGTCTTGTGTCAAACAGGT +
Preference number: 5 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPIRRKF*VLCQTG
Trigger: ACCTGTTTGACACAAGACCAAGAATTTGCGCCTGAT...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATAACCTGAAGGTACTGTaGGTGTTGGGACAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNNLKVL*VLGQSS
Trigger: AGAAGACTGTCCCAACACCAACAGTACCTTCAGGTT...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCACCTGGCGCTTTGCTTaGGCATTGTTCAAGAGAAAT +
Preference number: 5 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPTWRFA*ALFKRN
Trigger: ATTTCTCTTGAACAATGCCAAAGCAAAGCGCCAGGT...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TTCTCCCACTGGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTCGGGGTATTCTCTGCCTaGGAAATCAAATGGAGACTA +
Preference number: 5 (lower is better)
Translates to: FSHWQGCLSHYPLTVDSFGVFSA*EIKWRL
Trigger: TAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCC...GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS TCA 90 bp GGCACAGTGTCAGGAGACATCCTCAACATTCTGAGATCTGAAGAGTaGTATTCCGACTCTCTTGTTGGCTTATGTGGAACAAATGAAGGC +
Preference number: 5 (lower is better)
Translates to: GTVSGDILNILRSEE*YSDSLVGLCGTNEG
Trigger: GCCTTCATTTGTTCCACATAAGCCAACAAGAGAGTCGGAATATCACTCTTCAGATCTCAGAATGTTGAGGATGTCTCCTGACACTGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684548.1
CDS GCA 90 bp GGGGAAAATGGTGTTTATTCATTTGGTCATCTACACCTGGCGCTTTaGTTTGGCATTGTTCAAGAGAAATGGGAGACGGAAGGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: GENGVYSFGHLHLAL*FGIVQEKWETEGLK
Trigger: CTTCAGACCTTCCGTCTCCCATTTCTCTTGAACAATGCCAAAGCAAAGCGCCAGGTGTAGATGACCAAATGAATAAACACCATTTTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CCA 90 bp CTAAAGCGACTGCTTGCTAAGTCTGAAGCTACTTCTGCAGTAGCCTaGAATAAAGCTTCACTAACTTCCGATGGTCGAGAAGACCATTCA +
Preference number: 5 (lower is better)
Translates to: LKRLLAKSEATSAVA*NKASLTSDGREDHS
Trigger: TGAATGGTCTTCTCGACCATCGGAAGTTAGTGAAGCTTTATTCCAGGCTACTGCAGAAGTAGCTTCAGACTTAGCAAGCAGTCGCTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000682565.1
ENST00000682675.1
ENST00000682801.1
ENST00000682859.1
ENST00000682889.1
ENST00000683791.1
ENST00000684548.1
CDS CCA 90 bp ACATTCGGACTCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTaGCAAGGATGCCTTAGTCACTACCCTCTTACTGTAGATTCCTTC +
Preference number: 5 (lower is better)
Translates to: TFGLCIFILQGFFSH*QGCLSHYPLTVDSF
Trigger: GAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGAGTCCGAATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683791.1
CDS-3UTR CAA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATCTGGTCCAGGAATTGTaGAAACCTTCAGCACATCTT +
Preference number: 5 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNLVQEL*KPSAHL
Trigger: AAGATGTGCTGAAGGTTTCAACAATTCCTGGACCAG...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATGTGGAAGAGGGTTCTTaGAAGCAAACCACCTTCTTA +
Preference number: 5 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNVEEGS*KQTTFL
Trigger: TAAGAAGGTGGTTTGCTTCAAAGAACCCTCTTCCAC...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGACCTTGGACAAGTCAGTaGTTCTTCCATGACCAAATA +
Preference number: 5 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGPWTSQ*FFHDQI
Trigger: TATTTGGTCATGGAAGAACAACTGACTTGTCCAAGG...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCATACAGCTTCTGGCTaGCATCCCATTCCCCGTGGA +
Preference number: 5 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHHTASG*HPIPRG
Trigger: TCCACGGGGAATGGGATGCAAGCCAGAAGCTGTATG...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAACTTTGAAATGGGAGTaGTTCTGGTCTAAGGATGCA +
Preference number: 5 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGTLKWE*FWSKDA
Trigger: TGCATCCTTAGACCAGAACAACTCCCATTTCAAAGT...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGGGAGCAATGGCATCATaGGATCCTGAATGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQGAMAS*DPEWEL
Trigger: AAGCTCCCATTCAGGATCCAATGATGCCATTGCTCC...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CACTCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGGAGCAATGGCATCATaGGATCCTGAATGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: HSFPKIHGKYLDHLVGVRGAMAS*DPEWEL
Trigger: AAGCTCCCATTCAGGATCCAATGATGCCATTGCTCC...CCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATAGAGGTCATCATCTCTaGTGCCTAGCACCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNRGHHL*CLAPEL
Trigger: CAGCTCAGGTGCTAGGCACAAGAGATGATGACCTCT...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CAA 90 bp GGGGTATTCTCTGCCTTGGAAATCAAATGGAGACTACATGCAGACTGGAGGCCCTCGGACTCTTCAATATaGATCTGTAGGGATTCTTTA +
Preference number: 5 (lower is better)
Translates to: GVFSALEIKWRLHADWRPSDSSI*ICRDSL
Trigger: TAAAGAATCCCTACAGATCAATATTGAAGAGTCCGA...GGGCCTCCAGTCTGCATGTAGTCTCCATTTGATTTCCAAGGCAGAGAATACCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CAA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTAGTGTGCTGAGTTGTTaGCTCTGGGGTGACCTTCTG +
Preference number: 5 (lower is better)
Translates to: TLFQLVRNGIERKGQMACSVLSC*LWGDLL
Trigger: CAGAAGGTCACCCCAGAGCAAACAACTCAGCACACT...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTAGTGTGCTGAGTTGTTaGCTCTGGGGTGACCTTCTG +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSSVLSC*LWGDLL
Trigger: CAGAAGGTCACCCCAGAGCAAACAACTCAGCACACT...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCAGTGTGCTGAGTTGTTaGCTCTGGGGTGACCTTCTG +
Preference number: 5 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLSVLSC*LWGDLL
Trigger: CAGAAGGTCACCCCAGAGCAAACAACTCAGCACACT...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCCTTATTTCTCTGCTGTaGTCTACCACTCCATTCCTT +
Preference number: 5 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPLISLL*STTPFL
Trigger: AAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAG...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGCTTATTTCTCTGCTGTaGTCTACCACTCCATTCCTT +
Preference number: 5 (lower is better)
Translates to: ELRHLHFHSARVFLPLARLISLL*STTPFL
Trigger: AAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAG...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGGTGCCGGAAAGGATGTaGGTGGTAGTATCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMVPERM*VVVSVS
Trigger: GCTCACAGATACTACCACCAACATCCTTTCCGGCAC...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAGTGCCGGAAAGGATGTaGGTGGTAGTATCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQVPERM*VVVSVS
Trigger: GCTCACAGATACTACCACCAACATCCTTTCCGGCAC...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATGTGCCGGAAAGGATGTaGGTGGTAGTATCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNVPERM*VVVSVS
Trigger: GCTCACAGATACTACCACCAACATCCTTTCCGGCAC...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCATGGCCAAAAGCTaGAATCAGCCGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLFMAKS*NQPGSV
Trigger: GACACTGCCCGGCTGATTCAAGCTTTTGGCCATGAA...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTTTCATGGCCAAAAGCTaGAATCAGCCGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSFMAKS*NQPGSV
Trigger: GACACTGCCCGGCTGATTCAAGCTTTTGGCCATGAA...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TTGGTACTACCAGAAGGCTTATATGGCAATAATAAAGGCTGGCCATCTGTGCCGAAGGTATCTCCTCTGTaGGTTGGTGATGCTGCTATA +
Preference number: 5 (lower is better)
Translates to: LVLPEGLYGNNKGWPSVPKVSPL*VGDAAI
Trigger: TATAGCAGCATCACCAACCAACAGAGGAGATACCTT...CGGCACAGATGGCCAGCCTTTATTATTGCCATATAAGCCTTCTGGTAGTACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAAACTTTCTTGCTGTGTTaGCTCCGCTTCTCAAGGTAT +
Preference number: 5 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKTFLLC*LRFSRY
Trigger: ATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAGT...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGAAGAGGGCAGTCACATaGCCAGATGGAATCTGTAGC +
Preference number: 5 (lower is better)
Translates to: HSFPVGKKWYREERANGLKRAVT*PDGICS
Trigger: GCTACAGATTCCATCTGGCAATGTGACTGCCCTCTT...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATGCGATTCCTGAAGGGTaGCTCTCACAAATGGCCTCA +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNAIPEG*LSQMAS
Trigger: TGAGGCCATTTGTGAGAGCAACCCTTCAGGAATCGC...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CAA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCTGGGAGACCACAGTATaGAACTTGGCTTCAACATTT +
Preference number: 5 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPWETTV*NLASTF
Trigger: AAATGTTGAAGCCAAGTTCAATACTGTGGTCTCCCA...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCTCAATAATTTGGAGGTaGGTTCCAGTGATCTCGAAG +
Preference number: 5 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPSIIWR*VPVISK
Trigger: CTTCGAGATCACTGGAACCAACCTCCAAATTATTGA...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS TCA 90 bp GGCACAGTGTCAGGAGACATCCTCAACATTCTGAGATCTGAAGAGTaGTATTCCGACTCTCTTGTTGGCTTTCTTTGTAGTTCAGCAACT +
Preference number: 5 (lower is better)
Translates to: GTVSGDILNILRSEE*YSDSLVGFLCSSAT
Trigger: AGTTGCTGAACTACAAAGAAAGCCAACAAGAGAGTCGGAATATCACTCTTCAGATCTCAGAATGTTGAGGATGTCTCCTGACACTGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000682889.1
CDS TCA 90 bp TTTCTATTTGAAGGAGGAGTAGATGCAGATGCTGCTAATGTACAGTaGTTTGGGGCTGACTGGGAGACCACAGTATTGAACTTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: FLFEGGVDADAANVQ*FGADWETTVLNLAS
Trigger: TGAAGCCAAGTTCAATACTGTGGTCTCCCAGTCAGCCCCAAATCACTGTACATTAGCAGCATCTGCATCTACTCCTCCTTCAAATAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000652487.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS TCA 90 bp AGCCTTTGGCACAGTGTCAGGAGACATCCTCAACATTCTGAGATCTaGAGAGTGATATTCCGACTCTCTTGTTGGCTTATGTGGAACAAA +
Preference number: 5 (lower is better)
Translates to: SLWHSVRRHPQHSEI*RVIFRLSCWLMWNK
Trigger: TTTGTTCCACATAAGCCAACAAGAGAGTCGGAATATCACTCTTCAGATCTCAGAATGTTGAGGATGTCTCCTGACACTGTGCCAAAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684548.1
CDS-3UTR CAA 90 bp TCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTACTAACTTAAAGGTACTGTaGGTATCTCAGTCTTCCGGT +
Preference number: 5 (lower is better)
Translates to: STTPFLHTSFPSAIIMCTNLKVL*VSQSSG
Trigger: ACCGGAAGACTGAGATACCAACAGTACCTTTAAGTT...AGTACACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CAA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTGAAAGGTTGACATGCTaGGCTCTGCATGATGATGGG +
Preference number: 5 (lower is better)
Translates to: TLFQLVRNGIERKGQMACERLTC*ALHDDG
Trigger: CCCATCATCATGCAGAGCCAAGCATGTCAACCTTTC...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp GAACTGAGGCATCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGGGCATTCGAAGACCTTaGCTGATTTTGAATTCATCA +
Preference number: 5 (lower is better)
Translates to: ELRHLHFHSARVFLPLARGIRRP*LILNSS
Trigger: TGATGAATTCAAAATCAGCAAAGGTCTTCGAATGCC...CCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGATGCCTCAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CAA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTGATGATGAGGCAAACTaGACAGGAGCTTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: TLFQLVRNGIERKGQMACDDEAN*TGALRS
Trigger: GCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCATC...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAGATGATGAGGCAAACTaGACAGGAGCTTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQDDEAN*TGALRS
Trigger: GCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCATC...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCGATGATGAGGCAAACTaGACAGGAGCTTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLDDEAN*TGALRS
Trigger: GCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCATC...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CAA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAACGGTGGTATCTGATTaGGAATCCGGAGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQTVVSD*ESGDGG
Trigger: TCCTCCATCTCCGGATTCCAAATCAGATACCACCGT...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCACGGTGGTATCTGATTaGGAATCCGGAGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLTVVSD*ESGDGG
Trigger: TCCTCCATCTCCGGATTCCAAATCAGATACCACCGT...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CAA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAGGAGCAATGGCATCATaGGATCCTGAATGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQGAMAS*DPEWEL
Trigger: AAGCTCCCATTCAGGATCCAATGATGCCATTGCTCC...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATGGAGCAATGGCATCATaGGATCCTGAATGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNGAMAS*DPEWEL
Trigger: AAGCTCCCATTCAGGATCCAATGATGCCATTGCTCC...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATCCTCAGTCACTGCCCTaGTACTGTGAATCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNPQSLP*YCESLA
Trigger: AGCAAGAGATTCACAGTACAAGGGCAGTGACTGAGG...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTGGGATTCTTTATTGTTaGGCCAGGCTTCCTCGGGAA +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSGILYC*ARLPRE
Trigger: TTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCC...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CAA 90 bp CAAAGATTCTTTTTCTTTAGCCTGGGCAGCCTCAGTCACTGCCCTTGTACTGTGAAATATCTTGATCACTaGGTAGGTGTACGGGATGAT +
Preference number: 5 (lower is better)
Translates to: QRFFFFSLGSLSHCPCTVKYLDH*VGVRDD
Trigger: ATCATCCCGTACACCTACCAAGTGATCAAGATATTT...CACAGTACAAGGGCAGTGACTGAGGCTGCCCAGGCTAAAGAAAAAGAATCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGTCTTGTCCATGTTTaGATAAGGAAGAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTISLVHV*IRKRKT
Trigger: TGTCTTCCTCTTCCTTATCAAAACATGGACAAGACT...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTCTGTTCAATTTTAATTaGATTAGACCTCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTILFNFN*IRPPSS
Trigger: CGAGCTGGGAGGTCTAATCAAATTAAAATTGAACAG...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAACTGTTCAATTTTAATTaGATTAGACCTCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQLFNFN*IRPPSS
Trigger: CGAGCTGGGAGGTCTAATCAAATTAAAATTGAACAG...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp GTTGTCTACCACTCCATTCCTTCACACTTCGTTCCCCTCTGCTATCATCATGTGTATCTCCTCTGTTGGTaGGTGATGCTGCTATATAAT +
Preference number: 5 (lower is better)
Translates to: VVYHSIPSHFVPLCYHHVYLLCW*VMLLYN
Trigger: ATTATATAGCAGCATCACCAACCAACAGAGGAGATA...CACATGATGATAGCAGAGGGGAACGAAGTGTGAAGGAATGGAGTGGTAGACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TTTAGCCAAACGATCAAGTCGGTCCACCAAGGACAGTTCTTTCCTGTCACCCAACTCACTCTTTTCCAGTaGGTAAGAAATGGTATAGAG +
Preference number: 5 (lower is better)
Translates to: FSQTIKSVHQGQFFPVTQLTLFQ*VRNGIE
Trigger: CTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG...TTGGGTGACAGGAAAGAACTGTCCTTGGTGGACCGACTTGATCGTTTGGCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CAA 90 bp CACATTGATGCTGAGGCTCTTTATTCTGGTATAATCTGTCTTAGTCTTGTCCATGCGATTCCTGAAGGGTaGCTCTCACAAATGGCCTCA +
Preference number: 5 (lower is better)
Translates to: HIDAEALYSGIICLSLVHAIPEG*LSQMAS
Trigger: TGAGGCCATTTGTGAGAGCAACCCTTCAGGAATCGC...ATGGACAAGACTAAGACAGATTATACCAGAATAAAGAGCCTCAGCATCAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CAA 90 bp CACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTTTTTCTCCCCAGAAGTaGATTGGTCACTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: HTGHWTRPLCRKYCSQTIFSPQK*IGHSLF
Trigger: AAAAAGAGAGTGACCAATCAACTTCTGGGGAGAAAA...AATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAGATATTCCGACTCTCTaGTTGGCTTTCTTTGTAGTT +
Preference number: 5 (lower is better)
Translates to: QAIGQGHYAESIAPKPLGDIPTL*LAFFVV
Trigger: AACTACAAAGAAAGCCAACAAGAGAGTCGGAATATC...TCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCATGGTTTTCTCTCATTaGATGATCTACATATGGGGC +
Preference number: 5 (lower is better)
Translates to: HCNTQAIGQGHYAESIAPMVFSH*MIYIWG
Trigger: GCCCCATATGTAGATCATCAAATGAGAGAAAACCAT...GGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAACTAATGTACAGTGATTaGGGGCTGACTGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQLMYSD*GLTGRP
Trigger: TGGTCTCCCAGTCAGCCCCAAATCACTGTACATTAG...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATCTAATGTACAGTGATTaGGGGCTGACTGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNLMYSD*GLTGRP
Trigger: TGGTCTCCCAGTCAGCCCCAAATCACTGTACATTAG...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CAA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGAACCCCGCTGAGCTGTaGTTTCCAAACAGACCACAT +
Preference number: 5 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMNPAEL*FPNRPH
Trigger: ATGTGGTCTGTTTGGAAACAACAGCTCAGCGGGGTT...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAAACCCCGCTGAGCTGTaGTTTCCAAACAGACCACAT +
Preference number: 5 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQNPAEL*FPNRPH
Trigger: ATGTGGTCTGTTTGGAAACAACAGCTCAGCGGGGTT...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGGTAACACACAGGCCATaGGACAAGGCCACTATGCAG +
Preference number: 5 (lower is better)
Translates to: AESIAPKPLGILITTLFQVTHRP*DKATMQ
Trigger: CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTAC...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS TCA 90 bp CCACTACACCCTTCAGGTTCAGACCTCATTACAGATTTGGCTGCTTaGTATTGCCTAAGAGTTTCTTCTAATGCCATACTGACTTTGCTC +
Preference number: 5 (lower is better)
Translates to: PLHPSGSDLITDLAA*YCLRVSSNAILTLL
Trigger: GAGCAAAGTCAGTATGGCATTAGAAGAAACTCTTAGGCAATATCAAGCAGCCAAATCTGTAATGAGGTCTGAACCTGAAGGGTGTAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000651434.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684197.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS TCA 90 bp TGCAAATACTGGGGTCCCCTCTGGATTGGAATGTCCTTCGAAATCTaGAATGTTCACTTGTATTTGCCTGGAGGTTACTATCTGGCTATT +
Preference number: 5 (lower is better)
Translates to: CKYWGPLWIGMSFEI*NVHLYLPGGYYLAI
Trigger: AATAGCCAGATAGTAACCTCCAGGCAAATACAAGTGAACATTTCAGATTTCGAAGGACATTCCAATCCAGAGGGGACCCCAGTATTTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000652487.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS-3UTR CAA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAAGGGGAGCAGGAAAATaGCATCGTTTCAGTGCCATA +
Preference number: 5 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQRGAGK*HRFSAI
Trigger: TATGGCACTGAAACGATGCAATTTTCCTGCTCCCCT...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTGTGGAAGAGGGTTCTTaGAAGCAAACCACCTTCTTA +
Preference number: 5 (lower is better)
Translates to: SILICRDSLLFGQASSGTVEEGS*KQTTFL
Trigger: TAAGAAGGTGGTTTGCTTCAAAGAACCCTCTTCCAC...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp CACTCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGGACTCTGTAAACCCTaGGACAAGTCAGTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: HSFPKIHGKYLDHLVGVRGLCKP*DKSVVL
Trigger: AAGAACAACTGACTTGTCCAAGGGTTTACAGAGTCC...CCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCATACAGCTTCTGGCTaGCATCCCATTCCCCGTGGA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLHTASG*HPIPRG
Trigger: TCCACGGGGAATGGGATGCAAGCCAGAAGCTGTATG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAAGGCATTCGAAGACCTTaGCTGATTTTGAATTCATCA +
Preference number: 5 (lower is better)
Translates to: CNTQAIGQGHYAESIAPKGIRRP*LILNSS
Trigger: TGATGAATTCAAAATCAGCAAAGGTCTTCGAATGCC...TTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCACGGTGGTATCTGATTaGGAATCCGGAGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEITVVSD*ESGDGG
Trigger: TCCTCCATCTCCGGATTCCAAATCAGATACCACCGT...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGAGCAATGGCATCATaGGATCCTGAATGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: LSHSFPVGKKWYREERANGAMAS*DPEWEL
Trigger: AAGCTCCCATTCAGGATCCAATGATGCCATTGCTCC...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTCCTCAGTCACTGCCCTaGTACTGTGAATCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: SFPVGKKWYREERANGLFPQSLP*YCESLA
Trigger: AGCAAGAGATTCACAGTACAAGGGCAGTGACTGAGG...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CACATTGATGCTGAGGCTCTTTATTCTGGTATAATCTGTCTTAGTCTTGTCCATGGGATTCTTTATTGTTaGGCCAGGCTTCCTCGGGAA +
Preference number: 5 (lower is better)
Translates to: HIDAEALYSGIICLSLVHGILYC*ARLPRE
Trigger: TTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCC...ATGGACAAGACTAAGACAGATTATACCAGAATAAAGAGCCTCAGCATCAATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGGGATTCTTTATTGTTaGGCCAGGCTTCCTCGGGAA +
Preference number: 5 (lower is better)
Translates to: TTLSHSFPVGKKWYREERGILYC*ARLPRE
Trigger: TTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCC...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGTGTAGGGATTCTTTATaGTTTGGCCAGGCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGCRDSL*FGQASS
Trigger: CGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACA...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATAAATATCTTGATCACTaGGTAGGTGTACGGGATGAT +
Preference number: 5 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNKYLDH*VGVRDD
Trigger: ATCATCCCGTACACCTACCAAGTGATCAAGATATTT...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TTGGTACTACCAGAAGGCTTATATGGCAATAATAAAGGCTGGCCATCTGTGCCGAGTCTTGTCCATGTTTaGATAAGGAAGAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: LVLPEGLYGNNKGWPSVPSLVHV*IRKRKT
Trigger: TGTCTTCCTCTTCCTTATCAAAACATGGACAAGACT...CGGCACAGATGGCCAGCCTTTATTATTGCCATATAAGCCTTCTGGTAGTACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTGACCTTCTGATCCCTTaGTGGATCACTAATTTGTCC +
Preference number: 5 (lower is better)
Translates to: SILICRDSLLFGQASSGTDLLIP*WITNLS
Trigger: GGACAAATTAGTGATCCACAAAGGGATCAGAAGGTC...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TTGGTGATGCTGCTATATAATTTAATTCGTCTGGGTGACAAGCATACTCTTTCAGTGCCGGAAAGGATGTaGGTGGTAGTATCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: LVMLLYNLIRLGDKHTLSVPERM*VVVSVS
Trigger: GCTCACAGATACTACCACCAACATCCTTTCCGGCAC...TGAAAGAGTATGCTTGTCACCCAGACGAATTAAATTATATAGCAGCATCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTTTCATGGCCAAAAGCTaGAATCAGCCGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: ESIAPKPLGILITTLFQTFMAKS*NQPGSV
Trigger: GACACTGCCCGGCTGATTCAAGCTTTTGGCCATGAA...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCAAGGTATCTCCTCTGTaGGTTGGTGATGCTGCTATA +
Preference number: 5 (lower is better)
Translates to: SHSFPVGKKWYREERANGKVSPL*VGDAAI
Trigger: TATAGCAGCATCACCAACCAACAGAGGAGATACCTT...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGGTATTCAGCACTTTCTaGCTGTGTTTGCTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGVFSTF*LCLLRF
Trigger: GAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATAC...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCGTATTCAGCACTTTCTaGCTGTGTTTGCTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLVFSTF*LCLLRF
Trigger: GAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATAC...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATGTATTCAGCACTTTCTaGCTGTGTTTGCTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNVFSTF*LCLLRF
Trigger: GAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATAC...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGAAGAGGGCAGTCACATaGCCAGATGGAATCTGTAGC +
Preference number: 5 (lower is better)
Translates to: TTLSHSFPVGKKWYREERKRAVT*PDGICS
Trigger: GCTACAGATTCCATCTGGCAATGTGACTGCCCTCTT...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCTCCAGGGTCTGGTCTaGGTTATTGGTTCAAACCAG +
Preference number: 5 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSLQGLV*VIGSNQ
Trigger: CTGGTTTGAACCAATAACCAAGACCAGACCCTGGAG...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CAA 90 bp GGTATTAACCCTCTCATTTTACAGGTAAATTGGCCAAAAGTGCTTCATTACCTTGGCCCTTGCCAATCTTaGTACTGGGGTTTGCTGAAC +
Preference number: 5 (lower is better)
Translates to: GINPLILQVNWPKVLHYLGPCQS*YWGLLN
Trigger: GTTCAGCAAACCCCAGTACAAAGATTGGCAAGGGCC...AAGGTAATGAAGCACTTTTGGCCAATTTACCTGTAAAATGAGAGGGTTAATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR CAA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATTTCCCCTGCAGGCCCTaGGTTAAATATGTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: LSHSFPVGKKWYREERANFPCRP*VKYVSA
Trigger: GGCAGAAACATATTTAACCAAGGGCCTGCAGGGGAA...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACGTCCAGCAAGGCCTGTaGGTAGAAAACAAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHVQQGL*VENKEL
Trigger: AAGCTCCTTGTTTTCTACCAACAGGCCTTGCTGGAC...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGTCCAGCAAGGCCTGTaGGTAGAAAACAAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: TTLSHSFPVGKKWYREERVQQGL*VENKEL
Trigger: AAGCTCCTTGTTTTCTACCAACAGGCCTTGCTGGAC...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAACCTGAAGGTACTGTaGGTGTTGGGACAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: TLSHSFPVGKKWYREERANLKVL*VLGQSS
Trigger: AGAAGACTGTCCCAACACCAACAGTACCTTCAGGTT...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTTCTGCACGTGGGGCTTaGCTTTGTTCAAAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: SFPVGKKWYREERANGLFSARGA*LCSKSS
Trigger: AGAGCTCTTTGAACAAAGCAAAGCCCCACGTGCAGA...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTCGCTGGAACTTGGAGTaGGGAAAGTTATCCCAACAT +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSRWNLE*GKLSQH
Trigger: ATGTTGGGATAACTTTCCCAACTCCAAGTTCCAGCG...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTTGTGAACTTGCTGCCTaGTATCTGGATGTGTCTCCT +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSCELAA*YLDVSP
Trigger: AGGAGACACATCCAGATACAAGGCAGCAAGTTCACA...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS TCA 90 bp ACCCGGCTTTCCTCTTCCTCTGCATTTCTGAGTATTTCTTTAGCATaGTTCAGTGAGGATTCACATTGCAGAAGGTTTTTCACATGTGCA +
Preference number: 5 (lower is better)
Translates to: TRLSSSSAFLSISLA*FSEDSHCRRFFTCA
Trigger: TGCACATGTGAAAAACCTTCTGCAATGTGAATCCTCACTGAATCATGCTAAAGAAATACTCAGAAATGCAGAGGAAGAGGAAAGCCGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000651434.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684197.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS TCA 90 bp GAACTTGGTCTGCCCATGCTAATAAGGGTATGGTTATCAGAAATCTaGATTTCCTTGAAATTGCTACAATTTGCCCTGGTACTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: ELGLPMLIRVWLSEI*ISLKLLQFALVLGS
Trigger: TGAGCCCAGTACCAGGGCAAATTGTAGCAATTTCAAGGAAATTCAGATTTCTGATAACCATACCCTTATTAGCATGGGCAGACCAAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS TCA 90 bp AGCCTTTGGCACAGTGTCAGGAGACATCCTCAACATTCTGAGATCTaGAGAGTGATATTCCGACTCTCTTGTTGGTGGTTAAATATGTTT +
Preference number: 5 (lower is better)
Translates to: SLWHSVRRHPQHSEI*RVIFRLSCWWLNMF
Trigger: AAACATATTTAACCACCAACAAGAGAGTCGGAATATCACTCTTCAGATCTCAGAATGTTGAGGATGTCTCCTGACACTGTGCCAAAGGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683791.1
CDS GCA 90 bp CTCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTGGCAAGGATaGCTTAGTCACTACCCTCTTACTGTAGATTCCTTCTTTATGTTT +
Preference number: 5 (lower is better)
Translates to: LCIFILQGFFSHWQG*LSHYPLTVDSFFMF
Trigger: AAACATAAAGAAGGAATCTACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683791.1
CDS CCA 90 bp AAATGGTGTTTATTCATTTGGTCATCTACACCTGGCGCTTTGCTTTaGCATTGTTCAAGAGAAATGGGAGACGGAAGGTCTGAAGCTATA +
Preference number: 5 (lower is better)
Translates to: KWCLFIWSSTPGALL*HCSREMGDGRSEAI
Trigger: TATAGCTTCAGACCTTCCGTCTCCCATTTCTCTTGAACAATGCCAAAGCAAAGCGCCAGGTGTAGATGACCAAATGAATAAACACCATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CCA 90 bp GAACTGAGGCATCTGAATGGGAGCTTTCAACGGTGGTATCTGATTTaGAATCCGGAGATGGAGGAATTTGTCTTAATTGTGGAACATAAT +
Preference number: 5 (lower is better)
Translates to: ELRHLNGSFQRWYLI*NPEMEEFVLIVEHN
Trigger: ATTATGTTCCACAATTAAGACAAATTCCTCCATCTCCGGATTCCAAATCAGATACCACCGTTGAAAGCTCCCATTCAGATGCCTCAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684460.1
CDS CCA 90 bp ATAAACAGGCATTACCTAGCAGTGGAGAACAGAAGAGATCTCTGTTaGGTTCCTTTACTTGATTTTCTGATTGCGTCAATATGCCCTCCT +
Preference number: 5 (lower is better)
Translates to: INRHYLAVENRRDLC*VPLLDFLIASICPP
Trigger: AGGAGGGCATATTGACGCAATCAGAAAATCAAGTAAAGGAACCCAACAGAGATCTCTTCTGTTCTCCACTGCTAGGTAATGCCTGTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS-3UTR CAA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCAACTTAAAGGTACTGTaGGTATCTCAGTCTTCCGGT +
Preference number: 5 (lower is better)
Translates to: SHSFPVGKKWYREERANGNLKVL*VSQSSG
Trigger: ACCGGAAGACTGAGATACCAACAGTACCTTTAAGTT...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAACTTGCCCAAGAGCACTaGAGATCTTTAGAGCATCTT +
Preference number: 5 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQLAQEH*RSLEHL
Trigger: AAGATGCTCTAAAGATCTCAAGTGCTCTTGGGCAAG...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATAGGGGAGCAGGAAAATaGCATCGTTTCAGTGCCATA +
Preference number: 5 (lower is better)
Translates to: LSHSFPVGKKWYREERANRGAGK*HRFSAI
Trigger: TATGGCACTGAAACGATGCAATTTTCCTGCTCCCCT...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCAGGGGAGCAGGAAAATaGCATCGTTTCAGTGCCATA +
Preference number: 5 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEIRGAGK*HRFSAI
Trigger: TATGGCACTGAAACGATGCAATTTTCCTGCTCCCCT...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp GGCCATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTCTGTTATACTTGTCTaGGGTGAAACATATGGAAAG +
Preference number: 5 (lower is better)
Translates to: GHWTRPLCRKYCSQTIRNSVILV*GETYGK
Trigger: CTTTCCATATGTTTCACCCAAGACAAGTATAACAGA...ATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAATGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TTGGTACTACCAGAAGGCTTATATGGCAATAATAAAGGCTGGCCATCTGTGCCGTGCTATCTGTTATACTaGTCTTGGGTGAAACATATG +
Preference number: 5 (lower is better)
Translates to: LVLPEGLYGNNKGWPSVPCYLLY*SWVKHM
Trigger: CATATGTTTCACCCAAGACAAGTATAACAGATAGCA...CGGCACAGATGGCCAGCCTTTATTATTGCCATATAAGCCTTCTGGTAGTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGCCTTGGACAAGTCAGTaGTTCTTCCATGACCAAATA +
Preference number: 5 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSPWTSQ*FFHDQI
Trigger: TATTTGGTCATGGAAGAACAACTGACTTGTCCAAGG...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CAA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTGGACTCTGTAAACCCTaGGACAAGTCAGTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: TLFQLVRNGIERKGQMACGLCKP*DKSVVL
Trigger: AAGAACAACTGACTTGTCCAAGGGTTTACAGAGTCC...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAGAAAGGTTGACATGCTaGGCTCTGCATGATGATGGG +
Preference number: 5 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKERLTC*ALHDDG
Trigger: CCCATCATCATGCAGAGCCAAGCATGTCAACCTTTC...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CAA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCACTTTGAAATGGGAGTaGTTCTGGTCTAAGGATGCA +
Preference number: 5 (lower is better)
Translates to: SHSFPVGKKWYREERANGTLKWE*FWSKDA
Trigger: TGCATCCTTAGACCAGAACAACTCCCATTTCAAAGT...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGAGGTCATCATCTCTaGTGCCTAGCACCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRGHHL*CLAPEL
Trigger: CAGCTCAGGTGCTAGGCACAAGAGATGATGACCTCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TTCACAATGGTGTGTAACTGTCACCACAATCTATTTCCAGAAGTTTTTCATCATAGAGGTCATCATCTCTaGTGCCTAGCACCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: FTMVCNCHHNLFPEVFHHRGHHL*CLAPEL
Trigger: CAGCTCAGGTGCTAGGCACAAGAGATGATGACCTCT...ATGATGAAAAACTTCTGGAAATAGATTGTGGTGACAGTTACACACCATTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CAA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTGTAGGGATTCTTTATaGTTTGGCCAGGCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSCRDSL*FGQASS
Trigger: CGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACA...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TTGGTACTACCAGAAGGCTTATATGGCAATAATAAAGGCTGGCCATCTGTGCCGTCGGACTCTTCAATATaGATCTGTAGGGATTCTTTA +
Preference number: 5 (lower is better)
Translates to: LVLPEGLYGNNKGWPSVPSDSSI*ICRDSL
Trigger: TAAAGAATCCCTACAGATCAATATTGAAGAGTCCGA...CGGCACAGATGGCCAGCCTTTATTATTGCCATATAAGCCTTCTGGTAGTACCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp CTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCGACAAGTCTTGTCCATGTTTaGATAAGGAAGAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: LSCRATSLSVWVNISDSTSLVHV*IRKRKT
Trigger: TGTCTTCCTCTTCCTTATCAAAACATGGACAAGACT...TGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATGACCTTCTGATCCCTTaGTGGATCACTAATTTGTCC +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNDLLIP*WITNLS
Trigger: GGACAAATTAGTGATCCACAAAGGGATCAGAAGGTC...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGTGTGCTGAGTTGTTaGCTCTGGGGTGACCTTCTG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSVLSC*LWGDLL
Trigger: CAGAAGGTCACCCCAGAGCAAACAACTCAGCACACT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTGTCGCTCCCGATACTaGTTCCACAGTTCATTCAAA +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNCRSRY*FHSSFK
Trigger: TTTGAATGAACTGTGGAACAAGTATCGGGAGCGACA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGTGCCGGAAAGGATGTaGGTGGTAGTATCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLVPERM*VVVSVS
Trigger: GCTCACAGATACTACCACCAACATCCTTTCCGGCAC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTCATGGCCAAAAGCTaGAATCAGCCGGGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLFMAKS*NQPGSV
Trigger: GACACTGCCCGGCTGATTCAAGCTTTTGGCCATGAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTAAGGTATCTCCTCTGTaGGTTGGTGATGCTGCTATA +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSKVSPL*VGDAAI
Trigger: TATAGCAGCATCACCAACCAACAGAGGAGATACCTT...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCAAGGTATCTCCTCTGTaGGTTGGTGATGCTGCTATA +
Preference number: 5 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLKVSPL*VGDAAI
Trigger: TATAGCAGCATCACCAACCAACAGAGGAGATACCTT...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTACTTTCTTGCTGTGTTaGCTCCGCTTCTCAAGGTAT +
Preference number: 5 (lower is better)
Translates to: TLFQLVRNGIERKGQMACTFLLC*LRFSRY
Trigger: ATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAGT...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATACTTTCTTGCTGTGTTaGCTCCGCTTCTCAAGGTAT +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNTFLLC*LRFSRY
Trigger: ATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAGT...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTACTTTCTTGCTGTGTTaGCTCCGCTTCTCAAGGTAT +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSTFLLC*LRFSRY
Trigger: ATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAGT...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGCGATTCCTGAAGGGTaGCTCTCACAAATGGCCTCA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLAIPEG*LSQMAS
Trigger: TGAGGCCATTTGTGAGAGCAACCCTTCAGGAATCGC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCTGAGGAAAATAAACTaGTGTCAGTCCCAGGGAACT +
Preference number: 5 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMLRKIN*CQSQGT
Trigger: AGTTCCCTGGGACTGACACAAGTTTATTTTCCTCAG...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAGGATGTATCCAAGGTTaGGGAAGAGTCCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQGCIQG*GRVHFL
Trigger: CAAGAAATGGACTCTTCCCAAACCTTGGATACATCC...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTATCAGGCGCAAATTCTaGGTCTTGTGTCAAACAGGT +
Preference number: 5 (lower is better)
Translates to: TLFQLVRNGIERKGQMACIRRKF*VLCQTG
Trigger: ACCTGTTTGACACAAGACCAAGAATTTGCGCCTGAT...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTTTCCCCTGCAGGCCCTaGGTTAAATATGTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: ESIAPKPLGILITTLFQTFPCRP*VKYVSA
Trigger: GGCAGAAACATATTTAACCAAGGGCCTGCAGGGGAA...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGTCAGAGCCTTTTCAGTaGCATAACTATCTGGCCACT +
Preference number: 5 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMSEPFQ*HNYLAT
Trigger: AGTGGCCAGATAGTTATGCAACTGAAAAGGCTCTGA...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAACCTGGCGCTTTGCTTaGGCATTGTTCAAGAGAAAT +
Preference number: 5 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQTWRFA*ALFKRN
Trigger: ATTTCTCTTGAACAATGCCAAAGCAAAGCGCCAGGT...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATTCTACACCTGGCGCTTaGCTTTGGCATTGTTCAAGA +
Preference number: 5 (lower is better)
Translates to: LSHSFPVGKKWYREERANSTPGA*LWHCSR
Trigger: TCTTGAACAATGCCAAAGCAAAGCGCCAGGTGTAGA...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAATGGTGTTTATTCATTaGGTCATCTACACCTGGCGC +
Preference number: 5 (lower is better)
Translates to: TLSHSFPVGKKWYREERAMVFIH*VIYTWR
Trigger: GCGCCAGGTGTAGATGACCAAATGAATAAACACCAT...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTATGGTGTTTATTCATTaGGTCATCTACACCTGGCGC +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSMVFIH*VIYTWR
Trigger: GCGCCAGGTGTAGATGACCAAATGAATAAACACCAT...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTAAGAAATCACATGGTTaGCTACCTGGATGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSKKSHG*LPGCVS
Trigger: GGAGACACATCCAGGTAGCAAACCATGTGATTTCTT...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000651750.1
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATAAGAAATCACATGGTTaGCTACCTGGATGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNKKSHG*LPGCVS
Trigger: GGAGACACATCCAGGTAGCAAACCATGTGATTTCTT...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000651750.1
CDS-3UTR CAA 90 bp CACATTGATGCTGAGGCTCTTTATTCTGGTATAATCTGTCTTAGTCTTGTCCATCGCTGGAACTTGGAGTaGGGAAAGTTATCCCAACAT +
Preference number: 5 (lower is better)
Translates to: HIDAEALYSGIICLSLVHRWNLE*GKLSQH
Trigger: ATGTTGGGATAACTTTCCCAACTCCAAGTTCCAGCG...ATGGACAAGACTAAGACAGATTATACCAGAATAAAGAGCCTCAGCATCAATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS GCA 90 bp AGGATTTTGTTCTTCAGTGAAATGAGAATTAAATACCCCCACAGATaGTCCAGTACACTGGCTACCTTCAGTAACACCAACCTTAACAAC +
Preference number: 5 (lower is better)
Translates to: RILFFSEMRIKYPHR*SSTLATFSNTNLNN
Trigger: GTTGTTAAGGTTGGTGTTACTGAAGGTAGCCAGTGTACTGGAGCATCTGTGGGGGTATTTAATTCTCATTTCACTGAAGAACAAAATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS GCA 90 bp TTGAGGTATCTAACCATTCTGGCACCAGCCATCATCAATTACATTTaGCATTGGCGAGAGCCTATTTATCACAATGTTAGTACTTATGCG +
Preference number: 5 (lower is better)
Translates to: LRYLTILAPAIINYI*HWREPIYHNVSTYA
Trigger: CGCATAAGTACTAACATTGTGATAAATAGGCTCTCGCCAATGGCAAATGTAATTGATGATGGCTGGTGCCAGAATGGTTAGATACCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS CCA 90 bp CTTTTTAACTGCAAGGAATTCCAAACTTTGAAATGGGAGTTGTTCTaGTCTAAGGATGCAGAAAGGTTGACATGCTTGGCTCTGCATGAT +
Preference number: 5 (lower is better)
Translates to: LFNCKEFQTLKWELF*SKDAERLTCLALHD
Trigger: ATCATGCAGAGCCAAGCATGTCAACCTTTCTGCATCCTTAGACCAGAACAACTCCCATTTCAAAGTTTGGAATTCCTTGCAGTTAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS-3UTR CAA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCATTGGTCCAATCACAGTaGAAATCTTGGGCTTCTCTA +
Preference number: 5 (lower is better)
Translates to: TLSHSFPVGKKWYREERALVQSQ*KSWASL
Trigger: TAGAGAAGCCCAAGATTTCAACTGTGATTGGACCAA...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCCTGGTCCAGGAATTGTaGAAACCTTCAGCACATCTT +
Preference number: 5 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEILVQEL*KPSAHL
Trigger: AAGATGTGCTGAAGGTTTCAACAATTCCTGGACCAG...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CAA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGCTGGTCCAGGAATTGTaGAAACCTTCAGCACATCTT +
Preference number: 5 (lower is better)
Translates to: TTLSHSFPVGKKWYREERLVQEL*KPSAHL
Trigger: AAGATGTGCTGAAGGTTTCAACAATTCCTGGACCAG...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGTGGAAGAGGGTTCTTaGAAGCAAACCACCTTCTTA +
Preference number: 5 (lower is better)
Translates to: LSHSFPVGKKWYREERANVEEGS*KQTTFL
Trigger: TAAGAAGGTGGTTTGCTTCAAAGAACCCTCTTCCAC...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATAATGCCATACTGACTTaGCTCTCTGCTTCCTGTAGA +
Preference number: 5 (lower is better)
Translates to: LSHSFPVGKKWYREERANNAILT*LSASCR
Trigger: TCTACAGGAAGCAGAGAGCAAAGTCAGTATGGCATT...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTAATGCCATACTGACTTaGCTCTCTGCTTCCTGTAGA +
Preference number: 5 (lower is better)
Translates to: SFPVGKKWYREERANGLFNAILT*LSASCR
Trigger: TCTACAGGAAGCAGAGAGCAAAGTCAGTATGGCATT...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAACCTTGGACAAGTCAGTaGTTCTTCCATGACCAAATA +
Preference number: 5 (lower is better)
Translates to: HFLTLFQLVRNGIERKGQPWTSQ*FFHDQI
Trigger: TATTTGGTCATGGAAGAACAACTGACTTGTCCAAGG...TTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGAAAGGTTGACATGCTaGGCTCTGCATGATGATGGG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLERLTC*ALHDDG
Trigger: CCCATCATCATGCAGAGCCAAGCATGTCAACCTTTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGGAAAGGTTGACATGCTaGGCTCTGCATGATGATGGG +
Preference number: 5 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILERLTC*ALHDDG
Trigger: CCCATCATCATGCAGAGCCAAGCATGTCAACCTTTC...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGATGATGAGGCAAACTaGACAGGAGCTTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLDDEAN*TGALRS
Trigger: GCTACGCAAAGCTCCTGTCAAGTTTGCCTCATCATC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACGGTGGTATCTGATTaGGAATCCGGAGATGGAGGA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTVVSD*ESGDGG
Trigger: TCCTCCATCTCCGGATTCCAAATCAGATACCACCGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGAGCAATGGCATCATaGGATCCTGAATGGGAGCTT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGAMAS*DPEWEL
Trigger: AAGCTCCCATTCAGGATCCAATGATGCCATTGCTCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCTCAGTCACTGCCCTaGTACTGTGAATCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPQSLP*YCESLA
Trigger: AGCAAGAGATTCACAGTACAAGGGCAGTGACTGAGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCCTCAGTCACTGCCCTaGTACTGTGAATCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILPQSLP*YCESLA
Trigger: AGCAAGAGATTCACAGTACAAGGGCAGTGACTGAGG...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGGATTCTTTATTGTTaGGCCAGGCTTCCTCGGGAA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGILYC*ARLPRE
Trigger: TTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAATGTAGGGATTCTTTATaGTTTGGCCAGGCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKCRDSL*FGQASS
Trigger: CGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACA...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTAAATATCTTGATCACTaGGTAGGTGTACGGGATGAT +
Preference number: 5 (lower is better)
Translates to: LTLFQLVRNGIERKGQMAKYLDH*VGVRDD
Trigger: ATCATCCCGTACACCTACCAAGTGATCAAGATATTT...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CACTCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGAAATATCTTGATCACTaGGTAGGTGTACGGGATGAT +
Preference number: 5 (lower is better)
Translates to: HSFPKIHGKYLDHLVGVRKYLDH*VGVRDD
Trigger: ATCATCCCGTACACCTACCAAGTGATCAAGATATTT...CCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp CTTTCGTGCAGAGCCACCTCTCTATCTGTTTGGGTCAATATATCTGATTCGACATTTCCCAAATTCACATaGATGCTGAGGCTCTTTATT +
Preference number: 5 (lower is better)
Translates to: LSCRATSLSVWVNISDSTFPKFT*MLRLFI
Trigger: AATAAAGAGCCTCAGCATCAATGTGAATTTGGGAAA...TGTCGAATCAGATATATTGACCCAAACAGATAGAGAGGTGGCTCTGCACGAAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGACCTTCTGATCCCTTaGTGGATCACTAATTTGTCC +
Preference number: 5 (lower is better)
Translates to: LSHSFPVGKKWYREERANDLLIP*WITNLS
Trigger: GGACAAATTAGTGATCCACAAAGGGATCAGAAGGTC...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCGACCTTCTGATCCCTTaGTGGATCACTAATTTGTCC +
Preference number: 5 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEIDLLIP*WITNLS
Trigger: GGACAAATTAGTGATCCACAAAGGGATCAGAAGGTC...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTGACCTTCTGATCCCTTaGTGGATCACTAATTTGTCC +
Preference number: 5 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSDLLIP*WITNLS
Trigger: GGACAAATTAGTGATCCACAAAGGGATCAGAAGGTC...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGTGTCGCTCCCGATACTaGTTCCACAGTTCATTCAAA +
Preference number: 5 (lower is better)
Translates to: TTLSHSFPVGKKWYREERCRSRY*FHSSFK
Trigger: TTTGAATGAACTGTGGAACAAGTATCGGGAGCGACA...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTGTCGCTCCCGATACTaGTTCCACAGTTCATTCAAA +
Preference number: 5 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSCRSRY*FHSSFK
Trigger: TTTGAATGAACTGTGGAACAAGTATCGGGAGCGACA...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATCTTATTTCTCTGCTGTaGTCTACCACTCCATTCCTT +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNLISLL*STTPFL
Trigger: AAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAG...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTCTTATTTCTCTGCTGTaGTCTACCACTCCATTCCTT +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSLISLL*STTPFL
Trigger: AAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAG...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp CACTCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGCTGTTCAATTTTAATTaGATTAGACCTCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: HSFPKIHGKYLDHLVGVRLFNFN*IRPPSS
Trigger: CGAGCTGGGAGGTCTAATCAAATTAAAATTGAACAG...CCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp CACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTATCTCCTCTGTTGGTaGGTGATGCTGCTATATAAT +
Preference number: 5 (lower is better)
Translates to: HSFPVGKKWYREERANGLYLLCW*VMLLYN
Trigger: ATTATATAGCAGCATCACCAACCAACAGAGGAGATA...CAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGTATCTCCTCTGTTGGTaGGTGATGCTGCTATATAAT +
Preference number: 5 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQYLLCW*VMLLYN
Trigger: ATTATATAGCAGCATCACCAACCAACAGAGGAGATA...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAACTAAGGTATCTCCTCTGTaGGTTGGTGATGCTGCTATA +
Preference number: 5 (lower is better)
Translates to: HGKYLDHLVGVRDDECKTKVSPL*VGDAAI
Trigger: TATAGCAGCATCACCAACCAACAGAGGAGATACCTT...AGTTTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACAAGGTATCTCCTCTGTaGGTTGGTGATGCTGCTATA +
Preference number: 5 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHKVSPL*VGDAAI
Trigger: TATAGCAGCATCACCAACCAACAGAGGAGATACCTT...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGACTTTCTTGCTGTGTTaGCTCCGCTTCTCAAGGTAT +
Preference number: 5 (lower is better)
Translates to: TTLSHSFPVGKKWYREERTFLLC*LRFSRY
Trigger: ATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAGT...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTCCAGGGTCTGGTCTaGGTTATTGGTTCAAACCAG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLQGLV*VIGSNQ
Trigger: CTGGTTTGAACCAATAACCAAGACCAGACCCTGGAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTCCAGGGTCTGGTCTaGGTTATTGGTTCAAACCAG +
Preference number: 5 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILLQGLV*VIGSNQ
Trigger: CTGGTTTGAACCAATAACCAAGACCAGACCCTGGAG...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAGGATGTATCCAAGGTTaGGGAAGAGTCCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: IGQGHYAESIAPKPLGILGCIQG*GRVHFL
Trigger: CAAGAAATGGACTCTTCCCAAACCTTGGATACATCC...TAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTACGCAAATTCTTGGTCTaGTGTCAAACAGGTCAGCAA +
Preference number: 5 (lower is better)
Translates to: IGQGHYAESIAPKPLGILRKFLV*CQTGQQ
Trigger: TTGCTGACCTGTTTGACACAAGACCAAGAATTTGCG...TAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGCGCAAATTCTTGGTCTaGTGTCAAACAGGTCAGCAA +
Preference number: 5 (lower is better)
Translates to: TTLSHSFPVGKKWYREERRKFLV*CQTGQQ
Trigger: TTGCTGACCTGTTTGACACAAGACCAAGAATTTGCG...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTCCCCTGCAGGCCCTaGGTTAAATATGTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLFPCRP*VKYVSA
Trigger: GGCAGAAACATATTTAACCAAGGGCCTGCAGGGGAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCGATATTCCGACTCTCTaGTTGGCTTTCTTTGTAGTT +
Preference number: 5 (lower is better)
Translates to: SHSFPVGKKWYREERANGDIPTL*LAFFVV
Trigger: AACTACAAAGAAAGCCAACAAGAGAGTCGGAATATC...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGTCCAGCAAGGCCTGTaGGTAGAAAACAAGGAGCTT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLVQQGL*VENKEL
Trigger: AAGCTCCTTGTTTTCTACCAACAGGCCTTGCTGGAC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTTCAGAGCCTTTTCAGTaGCATAACTATCTGGCCACT +
Preference number: 5 (lower is better)
Translates to: SFPVGKKWYREERANGLFSEPFQ*HNYLAT
Trigger: AGTGGCCAGATAGTTATGCAACTGAAAAGGCTCTGA...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCTGCACGTGGGGCTTaGCTTTGTTCAAAGAGCTCT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSARGA*LCSKSS
Trigger: AGAGCTCTTTGAACAAAGCAAAGCCCCACGTGCAGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGTCTACATATGGGGCTTaGCACTGTTCAAAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMSTYGA*HCSKSS
Trigger: AGAACTCTTTGAACAGTGCAAAGCCCCATATGTAGA...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTCTACATATGGGGCTTaGCACTGTTCAAAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: TLFQLVRNGIERKGQMACSTYGA*HCSKSS
Trigger: AGAACTCTTTGAACAGTGCAAAGCCCCATATGTAGA...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGTGGGAGACCACAGTATaGAACTTGGCTTCAACATTT +
Preference number: 5 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGWETTV*NLASTF
Trigger: AAATGTTGAAGCCAAGTTCAATACTGTGGTCTCCCA...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTGGGAGACCACAGTATaGAACTTGGCTTCAACATTT +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNWETTV*NLASTF
Trigger: AAATGTTGAAGCCAAGTTCAATACTGTGGTCTCCCA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTAATGTACAGTGATTaGGGGCTGACTGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLMYSD*GLTGRP
Trigger: TGGTCTCCCAGTCAGCCCCAAATCACTGTACATTAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGAATGTTCACTTGTATTaGCCTGGAGGTTACTATCTG +
Preference number: 5 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQNVHLY*PGGYYL
Trigger: CAGATAGTAACCTCCAGGCAAATACAAGTGAACATT...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTAATGTTCACTTGTATTaGCCTGGAGGTTACTATCTG +
Preference number: 5 (lower is better)
Translates to: LTLFQLVRNGIERKGQMANVHLY*PGGYYL
Trigger: CAGATAGTAACCTCCAGGCAAATACAAGTGAACATT...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCGCTGGAACTTGGAGTaGGGAAAGTTATCCCAACAT +
Preference number: 5 (lower is better)
Translates to: ESIAPKPLGILITTLFQTRWNLE*GKLSQH
Trigger: ATGTTGGGATAACTTTCCCAACTCCAAGTTCCAGCG...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTTCTTCTCTGGTAATCTaGGACAAGTCAGTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: SILICRDSLLFGQASSGTSSLVI*DKSVVL
Trigger: AAGAACAACTGACTTGTCCAAGATTACCAGAGAAGA...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CAA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTTCTGTCTCTACGAACTaGCCTATTCTGACAATTTCA +
Preference number: 5 (lower is better)
Translates to: SILICRDSLLFGQASSGTSVSTN*PILTIS
Trigger: TGAAATTGTCAGAATAGGCAAGTTCGTAGAGACAGA...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS TCA 90 bp GGAAGAGGGTTCTTTGAAGCAAACCACCTTCTTAGATTGTATAAATaGAATATCACTAATATCTCTGAAACGGGCAAGGGGAGCAGGAAA +
Preference number: 5 (lower is better)
Translates to: GRGFFEANHLLRLYK*NITNISETGKGSRK
Trigger: TTTCCTGCTCCCCTTGCCCGTTTCAGAGATATTAGTGATATTTCATTTATACAATCTAAGAAGGTGGTTTGCTTCAAAGAACCCTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000651434.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684197.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS GCA 90 bp TCCATTGCTGAGATAACCAAAGTATACTATTCATCCCAAAAACTCTaGAAATTCAAGACTGAGGAGGCACACACAGTAGACAGTTATCAC +
Preference number: 5 (lower is better)
Translates to: SIAEITKVYYSSQKL*KFKTEEAHTVDSYH
Trigger: GTGATAACTGTCTACTGTGTGTGCCTCCTCAGTCTTGAATTTGCAGAGTTTTTGGGATGAATAGTATACTTTGGTTATCTCAGCAATGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS CCA 90 bp GATTCTCAAGTGTACAACATTATCTGTGTGTGTGTGATGGGAAGGTaGTGTATTTTACTTGCCATGCCTTTTTCTTACAGCTTTCAACTG +
Preference number: 5 (lower is better)
Translates to: DSQVYNIICVCVMGR*CILLAMPFSYSFQL
Trigger: CAGTTGAAAGCTGTAAGAAAAAGGCATGGCAAGTAAAATACACCACCTTCCCATCACACACACACAGATAATGTTGTACACTTGAGAATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS-3UTR CAA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAACTTGCCCAAGAGCACTaGAGATCTTTAGAGCATCTT +
Preference number: 5 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKLAQEH*RSLEHL
Trigger: AAGATGCTCTAAAGATCTCAAGTGCTCTTGGGCAAG...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGGGGAGCAGGAAAATaGCATCGTTTCAGTGCCATA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRGAGK*HRFSAI
Trigger: TATGGCACTGAAACGATGCAATTTTCCTGCTCCCCT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGGATGATGAATGTAAAGTGGAAGAGGGTTCTTaGAAGCAAACCACCTTCTTA +
Preference number: 5 (lower is better)
Translates to: IHGKYLDHLVGVRDDECKVEEGS*KQTTFL
Trigger: TAAGAAGGTGGTTTGCTTCAAAGAACCCTCTTCCAC...TTTACATTCATCATCCCGTACACCTACCAAGTGATCAAGATATTTGCCATGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTTACAGATTTGGCTGCTaGATATTGCCTAAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSYRFGC*ILPKSF
Trigger: GAAACTCTTAGGCAATATCAAGCAGCCAAATCTGTA...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CAA 90 bp TCAATATTGATCTGTAGGGATTCTTTATTGTTTGGCCAGGCTTCCTCGGGAACTTCTGTTATACTTGTCTaGGGTGAAACATATGGAAAG +
Preference number: 5 (lower is better)
Translates to: SILICRDSLLFGQASSGTSVILV*GETYGK
Trigger: CTTTCCATATGTTTCACCCAAGACAAGTATAACAGA...AGTTCCCGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACAGATCAATATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTCTGTTATACTTGTCTaGGGTGAAACATATGGAAAG +
Preference number: 5 (lower is better)
Translates to: SHSFPVGKKWYREERANGSVILV*GETYGK
Trigger: CTTTCCATATGTTTCACCCAAGACAAGTATAACAGA...GCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CACTCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGCAATCATGTGCTAAATaGAACTTCATATTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: HSFPKIHGKYLDHLVGVRQSCAK*NFIFQA
Trigger: TGCCTGGAATATGAAGTTCAATTTAGCACATGATTG...CCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp GAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTGGACTCTGTAAACCCTaGGACAAGTCAGTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: ESIAPKPLGILITTLFQTGLCKP*DKSVVL
Trigger: AAGAACAACTGACTTGTCCAAGGGTTTACAGAGTCC...AGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGTAGGGATTCTTTATaGTTTGGCCAGGCTTCCTCG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLCRDSL*FGQASS
Trigger: CGAGGAAGCCTGGCCAAACAATAAAGAATCCCTACA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCAAATATCTTGATCACTaGGTAGGTGTACGGGATGAT +
Preference number: 5 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLKYLDH*VGVRDD
Trigger: ATCATCCCGTACACCTACCAAGTGATCAAGATATTT...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTAGTCTTGTCCATGTTTaGATAAGGAAGAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSSLVHV*IRKRKT
Trigger: TGTCTTCCTCTTCCTTATCAAAACATGGACAAGACT...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CAA 90 bp CACTCTTTCCCAAAGATTCATGGCAAATATCTTGATCACTTGGTAGGTGTACGGTTTCCCAAATTCACATaGATGCTGAGGCTCTTTATT +
Preference number: 5 (lower is better)
Translates to: HSFPKIHGKYLDHLVGVRFPKFT*MLRLFI
Trigger: AATAAAGAGCCTCAGCATCAATGTGAATTTGGGAAA...CCGTACACCTACCAAGTGATCAAGATATTTGCCATGAATCTTTGGGAAAGAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp AGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGCAGTTTCCCAAATTCACATaGATGCTGAGGCTCTTTATT +
Preference number: 5 (lower is better)
Translates to: RNDHIIVTHRPLDKATMQFPKFT*MLRLFI
Trigger: AATAAAGAGCCTCAGCATCAATGTGAATTTGGGAAA...CTGCATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TTTCTGAAGCTTATTTCTCTGCTGTTGTCTACCACTCCATTCCTTCACACTTCGGTATCCATCACTTCTTaGTTTCCCAAATTCACATTG +
Preference number: 5 (lower is better)
Translates to: FLKLISLLLSTTPFLHTSVSITS*FPKFTL
Trigger: CAATGTGAATTTGGGAAACAAAGAAGTGATGGATAC...CGAAGTGTGAAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAGCTTCAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGCTTATTTCTCTGCTGTaGTCTACCACTCCATTCCTT +
Preference number: 5 (lower is better)
Translates to: TTLSHSFPVGKKWYREERLISLL*STTPFL
Trigger: AAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAG...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTCTTATTTCTCTGCTGTaGTCTACCACTCCATTCCTT +
Preference number: 5 (lower is better)
Translates to: SFPVGKKWYREERANGLFLISLL*STTPFL
Trigger: AAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAG...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCACTGTTCAATTTTAATTaGATTAGACCTCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: TLSHSFPVGKKWYREERALFNFN*IRPPSS
Trigger: CGAGCTGGGAGGTCTAATCAAATTAAAATTGAACAG...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTCTGTTCAATTTTAATTaGATTAGACCTCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSLFNFN*IRPPSS
Trigger: CGAGCTGGGAGGTCTAATCAAATTAAAATTGAACAG...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGTATCTCCTCTGTTGGTaGGTGATGCTGCTATATAAT +
Preference number: 5 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGYLLCW*VMLLYN
Trigger: ATTATATAGCAGCATCACCAACCAACAGAGGAGATA...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTATCTCCTCTGTTGGTaGGTGATGCTGCTATATAAT +
Preference number: 5 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLYLLCW*VMLLYN
Trigger: ATTATATAGCAGCATCACCAACCAACAGAGGAGATA...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTTATCTCCTCTGTTGGTaGGTGATGCTGCTATATAAT +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSYLLCW*VMLLYN
Trigger: ATTATATAGCAGCATCACCAACCAACAGAGGAGATA...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGTATTCAGCACTTTCTaGCTGTGTTTGCTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLVFSTF*LCLLRF
Trigger: GAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATAC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGGTATTCAGCACTTTCTaGCTGTGTTTGCTCCGCTTC +
Preference number: 5 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILVFSTF*LCLLRF
Trigger: GAAGCGGAGCAAACACAGCAAGAAAGTGCTGAATAC...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTTTCTCCCCAGAAGTaGATTGGTCACTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLFSPQK*IGHSLF
Trigger: AAAAAGAGAGTGACCAATCAACTTCTGGGGAGAAAA...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTTTTCTCCCCAGAAGTaGATTGGTCACTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNFSPQK*IGHSLF
Trigger: AAAAAGAGAGTGACCAATCAACTTCTGGGGAGAAAA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp GGTATTAACCCTCTCATTTTACAGGTAAATTGGCCAAAAGTGCTTCATTACCTTCTTAGAGTGAGGCTGTaGAAAACCTTCCTCCATTAC +
Preference number: 5 (lower is better)
Translates to: GINPLILQVNWPKVLHYLLRVRL*KTFLHY
Trigger: GTAATGGAGGAAGGTTTTCAACAGCCTCACTCTAAG...AAGGTAATGAAGCACTTTTGGCCAATTTACCTGTAAAATGAGAGGGTTAATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR CAA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGATTCCGACTCTCTTGTaGGCTTTCTTTGTAGTTCAG +
Preference number: 5 (lower is better)
Translates to: TTLSHSFPVGKKWYREERIPTLL*AFFVVQ
Trigger: CTGAACTACAAAGAAAGCCAACAAGAGAGTCGGAAT...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAACCTGAAGGTACTGTaGGTGTTGGGACAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLNLKVL*VLGQSS
Trigger: AGAAGACTGTCCCAACACCAACAGTACCTTCAGGTT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTATCTCTGGGAGGATTTaGTTCTTCAGTGAAATGAGA +
Preference number: 5 (lower is better)
Translates to: TLFQLVRNGIERKGQMACISGRI*FFSEMR
Trigger: TCTCATTTCACTGAAGAACAAAATCCTCCCAGAGAT...ACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAATGGTTTTCTCTCATTaGATGATCTACATATGGGGC +
Preference number: 5 (lower is better)
Translates to: TLSHSFPVGKKWYREERAMVFSH*MIYIWG
Trigger: GCCCCATATGTAGATCATCAAATGAGAGAAAACCAT...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCTACACCTGGCGCTTaGCTTTGGCATTGTTCAAGA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSTPGA*LWHCSR
Trigger: TCTTGAACAATGCCAAAGCAAAGCGCCAGGTGTAGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGTCTACACCTGGCGCTTaGCTTTGGCATTGTTCAAGA +
Preference number: 5 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILSTPGA*LWHCSR
Trigger: TCTTGAACAATGCCAAAGCAAAGCGCCAGGTGTAGA...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGTCAATAATTTGGAGGTaGGTTCCAGTGATCTCGAAG +
Preference number: 5 (lower is better)
Translates to: TTLSHSFPVGKKWYREERSIIWR*VPVISK
Trigger: CTTCGAGATCACTGGAACCAACCTCCAAATTATTGA...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCAATAATTTGGAGGTaGGTTCCAGTGATCTCGAAG +
Preference number: 5 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSSIIWR*VPVISK
Trigger: CTTCGAGATCACTGGAACCAACCTCCAAATTATTGA...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCGCTGGAACTTGGAGTaGGGAAAGTTATCCCAACAT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRWNLE*GKLSQH
Trigger: ATGTTGGGATAACTTTCCCAACTCCAAGTTCCAGCG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp CTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTTGATATACTATCTGTaGCCATACATGACAGGTCAA +
Preference number: 5 (lower is better)
Translates to: LTLFQLVRNGIERKGQMALIYYL*PYMTGQ
Trigger: TTGACCTGTCATGTATGGCAACAGATAGTATATCAA...AGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS TCA 90 bp TGGAAATCCAGTGAAGATTTAGGTCCTAGAAAACCTAAAGATTCTTaGTCCTGTGCTACAGGTTTACTGGTCAATAATTTGGAGGTTGGT +
Preference number: 5 (lower is better)
Translates to: WKSSEDLGPRKPKDS*SCATGLLVNNLEVG
Trigger: ACCAACCTCCAAATTATTGACCAGTAAACCTGTAGCACAGGATCAAGAATCTTTAGGTTTTCTAGGACCTAAATCTTCACTGGATTTCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000652487.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS GCA 90 bp ATTTTCTGCATCCTGGATTTCTTCAGAGCCAACATCTCTAAAACCTaGAGATTCTGGTTTATTTATTACAACTCTGTCATCAGCCTGAGA +
Preference number: 5 (lower is better)
Translates to: IFCILDFFRANISKT*RFWFIYYNSVISLR
Trigger: TCTCAGGCTGATGACAGAGTTGTAATAAATAAACCAGAATCTGCAGGTTTTAGAGATGTTGGCTCTGAAGAAATCCAGGATGCAGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684197.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS GCA 90 bp AAATATGTTTCTGCCTGCTTAGATGAATCTTCCTGTGTCCAATACTaGCCATATGAACGAGCAGCATCAAAATGGTCACTTCTTTTAGTA +
Preference number: 5 (lower is better)
Translates to: KYVSACLDESSCVQY*PYERAASKWSLLLV
Trigger: TACTAAAAGAAGTGACCATTTTGATGCTGCTCGTTCATATGGGCAGTATTGGACACAGGAAGATTCATCTAAGCAGGCAGAAACATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000682565.1
ENST00000682675.1
ENST00000682801.1
ENST00000682859.1
ENST00000682889.1
ENST00000683791.1
ENST00000684548.1
CDS GCA 90 bp TCTGAAAAAGAATCAGGGTACTTACTGGTTAAATATGTTTCTGCCTaGTTAGATGAATCTTCCTGTGTCCAATACTGCCCATATGAACGA +
Preference number: 5 (lower is better)
Translates to: SEKESGYLLVKYVSA*LDESSCVQYCPYER
Trigger: TCGTTCATATGGGCAGTATTGGACACAGGAAGATTCATCTAAGCAGGCAGAAACATATTTAACCAGTAAGTACCCTGATTCTTTTTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682675.1
CDS CCA 90 bp CTAAAGATTCTTGATCCTGTGCTACAGGTTTACTGGTCAATAATTTaGAGGTTGGTTCCAGTGATCTCGAAGATACAGTATGTAAGTCAA +
Preference number: 5 (lower is better)
Translates to: LKILDPVLQVYWSII*RLVPVISKIQYVSQ
Trigger: TTGACTTACATACTGTATCTTCGAGATCACTGGAACCAACCTCCAAATTATTGACCAGTAAACCTGTAGCACAGGATCAAGAATCTTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000652487.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTGGTCCAGGAATTGTaGAAACCTTCAGCACATCTT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLVQEL*KPSAHL
Trigger: AAGATGTGCTGAAGGTTTCAACAATTCCTGGACCAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTTGCCCAAGAGCACTaGAGATCTTTAGAGCATCTT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLAQEH*RSLEHL
Trigger: AAGATGCTCTAAAGATCTCAAGTGCTCTTGGGCAAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTGCCCAAGAGCACTaGAGATCTTTAGAGCATCTT +
Preference number: 5 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILLAQEH*RSLEHL
Trigger: AAGATGCTCTAAAGATCTCAAGTGCTCTTGGGCAAG...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGTGGAAGAGGGTTCTTaGAAGCAAACCACCTTCTTA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLVEEGS*KQTTFL
Trigger: TAAGAAGGTGGTTTGCTTCAAAGAACCCTCTTCCAC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAATGCCATACTGACTTaGCTCTCTGCTTCCTGTAGA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLNAILT*LSASCR
Trigger: TCTACAGGAAGCAGAGAGCAAAGTCAGTATGGCATT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAAATGCCATACTGACTTaGCTCTCTGCTTCCTGTAGA +
Preference number: 5 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLNAILT*LSASCR
Trigger: TCTACAGGAAGCAGAGAGCAAAGTCAGTATGGCATT...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp AAGAGGAAGACACATGTGTTCTCTATGTTTGTCTGGATGATGCTGAAAGAAATCTACAGATTTGGCTGCTaGATATTGCCTAAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: KRKTHVFSMFVWMMLKEIYRFGC*ILPKSF
Trigger: GAAACTCTTAGGCAATATCAAGCAGCCAAATCTGTA...GATTTCTTTCAGCATCATCCAGACAAACATAGAGAACACATGTGTCTTCCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTTACAGATTTGGCTGCTaGATATTGCCTAAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SFPVGKKWYREERANGLFYRFGC*ILPKSF
Trigger: GAAACTCTTAGGCAATATCAAGCAGCCAAATCTGTA...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGTGCTATCTGTTATACTaGTCTTGGGTGAAACATATG +
Preference number: 5 (lower is better)
Translates to: LHFLTLFQLVRNGIERKGCYLLY*SWVKHM
Trigger: CATATGTTTCACCCAAGACAAGTATAACAGATAGCA...CCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCTCTTGCTATCTGTTATACTaGTCTTGGGTGAAACATATG +
Preference number: 5 (lower is better)
Translates to: LYSWARSRYDLYSDFLFSCYLLY*SWVKHM
Trigger: CATATGTTTCACCCAAGACAAGTATAACAGATAGCA...AGAGAAGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGACTCTGTAAACCCTaGGACAAGTCAGTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGLCKP*DKSVVL
Trigger: AAGAACAACTGACTTGTCCAAGGGTTTACAGAGTCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TTGGTGATGCTGCTATATAATTTAATTCGTCTGGGTGACAAGCATACTCTTTCAACTTTGAAATGGGAGTaGTTCTGGTCTAAGGATGCA +
Preference number: 5 (lower is better)
Translates to: LVMLLYNLIRLGDKHTLSTLKWE*FWSKDA
Trigger: TGCATCCTTAGACCAGAACAACTCCCATTTCAAAGT...TGAAAGAGTATGCTTGTCACCCAGACGAATTAAATTATATAGCAGCATCACCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423048.5
CDS-3UTR CAA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTGGCATTCGAAGACCTTaGCTGATTTTGAATTCATCA +
Preference number: 5 (lower is better)
Translates to: SFPVGKKWYREERANGLFGIRRP*LILNSS
Trigger: TGATGAATTCAAAATCAGCAAAGGTCTTCGAATGCC...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGAGTCTTGTCCATGTTTaGATAAGGAAGAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: TTLSHSFPVGKKWYREERSLVHV*IRKRKT
Trigger: TGTCTTCCTCTTCCTTATCAAAACATGGACAAGACT...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTTCCCAAATTCACATaGATGCTGAGGCTCTTTATT +
Preference number: 5 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLFPKFT*MLRLFI
Trigger: AATAAAGAGCCTCAGCATCAATGTGAATTTGGGAAA...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TCTCTTTTTCTGTACTTCTGGAAGCTGCTCATAAATCCGTTTGGACCTCTGAATTTTCCCAAATTCACATaGATGCTGAGGCTCTTTATT +
Preference number: 5 (lower is better)
Translates to: SLFLYFWKLLINPFGPLNFPKFT*MLRLFI
Trigger: AATAAAGAGCCTCAGCATCAATGTGAATTTGGGAAA...ATTCAGAGGTCCAAACGGATTTATGAGCAGCTTCCAGAAGTACAGAAAAAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGGTATCCATCACTTCTTaGTTTCCCAAATTCACATTG +
Preference number: 5 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMVSITS*FPKFTL
Trigger: CAATGTGAATTTGGGAAACAAAGAAGTGATGGATAC...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp CTCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCGTATCCATCACTTCTTaGTTTCCCAAATTCACATTG +
Preference number: 5 (lower is better)
Translates to: LFLYSWARSRYDLYSDFLVSITS*FPKFTL
Trigger: CAATGTGAATTTGGGAAACAAAGAAGTGATGGATAC...GAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGACCTTCTGATCCCTTaGTGGATCACTAATTTGTCC +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLDLLIP*WITNLS
Trigger: GGACAAATTAGTGATCCACAAAGGGATCAGAAGGTC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGTCGCTCCCGATACTaGTTCCACAGTTCATTCAAA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLCRSRY*FHSSFK
Trigger: TTTGAATGAACTGTGGAACAAGTATCGGGAGCGACA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTCTGTTCAATTTTAATTaGATTAGACCTCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSLFNFN*IRPPSS
Trigger: CGAGCTGGGAGGTCTAATCAAATTAAAATTGAACAG...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAAGGTATCTCCTCTGTaGGTTGGTGATGCTGCTATA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLKVSPL*VGDAAI
Trigger: TATAGCAGCATCACCAACCAACAGAGGAGATACCTT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACTTTCTTGCTGTGTTaGCTCCGCTTCTCAAGGTAT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTFLLC*LRFSRY
Trigger: ATACCTTGAGAAGCGGAGCAAACACAGCAAGAAAGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATCTCACTCTTTTCCAGTaGGTAAGAAATGGTATAGAG +
Preference number: 5 (lower is better)
Translates to: LSHSFPVGKKWYREERANLTLFQ*VRNGIE
Trigger: CTCTATACCATTTCTTACCAACTGGAAAAGAGTGAG...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTGAGGAAAATAAACTaGTGTCAGTCCCAGGGAACT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLRKIN*CQSQGT
Trigger: AGTTCCCTGGGACTGACACAAGTTTATTTTCCTCAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGATGTATCCAAGGTTaGGGAAGAGTCCATTTCTTG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGCIQG*GRVHFL
Trigger: CAAGAAATGGACTCTTCCCAAACCTTGGATACATCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCGCAAATTCTTGGTCTaGTGTCAAACAGGTCAGCAA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLRKFLV*CQTGQQ
Trigger: TTGCTGACCTGTTTGACACAAGACCAAGAATTTGCG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATCAGGCGCAAATTCTaGGTCTTGTGTCAAACAGGT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLIRRKF*VLCQTG
Trigger: ACCTGTTTGACACAAGACCAAGAATTTGCGCCTGAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCAGAGCCTTTTCAGTaGCATAACTATCTGGCCACT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSEPFQ*HNYLAT
Trigger: AGTGGCCAGATAGTTATGCAACTGAAAAGGCTCTGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACATCTCTGGGAGGATTTaGTTCTTCAGTGAAATGAGA +
Preference number: 5 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHISGRI*FFSEMR
Trigger: TCTCATTTCACTGAAGAACAAAATCCTCCCAGAGAT...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACCTGGCGCTTTGCTTaGGCATTGTTCAAGAGAAAT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTWRFA*ALFKRN
Trigger: ATTTCTCTTGAACAATGCCAAAGCAAAGCGCCAGGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATGGTGTTTATTCATTaGGTCATCTACACCTGGCGC +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLMVFIH*VIYTWR
Trigger: GCGCCAGGTGTAGATGACCAAATGAATAAACACCAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAATGGTGTTTATTCATTaGGTCATCTACACCTGGCGC +
Preference number: 5 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLMVFIH*VIYTWR
Trigger: GCGCCAGGTGTAGATGACCAAATGAATAAACACCAT...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTAATGTTCACTTGTATTaGCCTGGAGGTTACTATCTG +
Preference number: 5 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSNVHLY*PGGYYL
Trigger: CAGATAGTAACCTCCAGGCAAATACAAGTGAACATT...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652487.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAAGAAATCACATGGTTaGCTACCTGGATGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLKKSHG*LPGCVS
Trigger: GGAGACACATCCAGGTAGCAAACCATGTGATTTCTT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAAAGAAATCACATGGTTaGCTACCTGGATGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLKKSHG*LPGCVS
Trigger: GGAGACACATCCAGGTAGCAAACCATGTGATTTCTT...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TTGAGAAATGATCATATCATTGTAACACACAGGCCATTGGACAAGGCCACTATGTTGATATACTATCTGTaGCCATACATGACAGGTCAA +
Preference number: 5 (lower is better)
Translates to: LRNDHIIVTHRPLDKATMLIYYL*PYMTGQ
Trigger: TTGACCTGTCATGTATGGCAACAGATAGTATATCAA...CATAGTGGCCTTGTCCAATGGCCTGTGTGTTACAATGATATGATCATTTCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCATGTTCTACTATTGCCTaGATATACTATCTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: TLSHSFPVGKKWYREERACSTIA*IYYLLP
Trigger: TGGCAACAGATAGTATATCAAGGCAATAGTAGAACA...TGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS GCA 90 bp CATGTTGTCATCTGTCCTTTACTTAGTCAAAACACATACTGTCACTaGTTATATACCCTGCATACCTTCCATATAATTCATCACCCTCTT +
Preference number: 5 (lower is better)
Translates to: HVVICPLLSQNTYCH*LYTLHTFHIIHHPL
Trigger: AAGAGGGTGATGAATTATATGGAAGGTATGCAGGGTATATAAGCAGTGACAGTATGTGTTTTGACTAAGTAAAGGACAGATGACAACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAACTTAAAGGTACTGTaGGTATCTCAGTCTTCCGGT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLNLKVL*VSQSSG
Trigger: ACCGGAAGACTGAGATACCAACAGTACCTTTAAGTT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACATGGACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGAACTTAAAGGTACTGTaGGTATCTCAGTCTTCCGGT +
Preference number: 5 (lower is better)
Translates to: TWTKNKLYSTRLTKVRILNLKVL*VSQSSG
Trigger: ACCGGAAGACTGAGATACCAACAGTACCTTTAAGTT...CAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGTCCATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACTGCTATCTGTTATACTaGTCTTGGGTGAAACATATG +
Preference number: 5 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHCYLLY*SWVKHM
Trigger: CATATGTTTCACCCAAGACAAGTATAACAGATAGCA...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTCAATCATGTGCTAAATaGAACTTCATATTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: SFPVGKKWYREERANGLFQSCAK*NFIFQA
Trigger: TGCCTGGAATATGAAGTTCAATTTAGCACATGATTG...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCAATCATGTGCTAAATaGAACTTCATATTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHQSCAK*NFIFQA
Trigger: TGCCTGGAATATGAAGTTCAATTTAGCACATGATTG...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCCTTGGACAAGTCAGTaGTTCTTCCATGACCAAATA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLPWTSQ*FFHDQI
Trigger: TATTTGGTCATGGAAGAACAACTGACTTGTCCAAGG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCACTTTGAAATGGGAGTaGTTCTGGTCTAAGGATGCA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLTLKWE*FWSKDA
Trigger: TGCATCCTTAGACCAGAACAACTCCCATTTCAAAGT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACTCGGACTCTTCAATATaGATCTGTAGGGATTCTTTA +
Preference number: 5 (lower is better)
Translates to: TRPLCRKYCSQTIRNFNHSDSSI*ICRDSL
Trigger: TAAAGAATCCCTACAGATCAATATTGAAGAGTCCGA...GTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTTCGGACTCTTCAATATaGATCTGTAGGGATTCTTTA +
Preference number: 5 (lower is better)
Translates to: SFPVGKKWYREERANGLFSDSSI*ICRDSL
Trigger: TAAAGAATCCCTACAGATCAATATTGAAGAGTCCGA...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTTCGGACTCTTCAATATaGATCTGTAGGGATTCTTTA +
Preference number: 5 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSSDSSI*ICRDSL
Trigger: TAAAGAATCCCTACAGATCAATATTGAAGAGTCCGA...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000651434.1
ENST00000652487.1
CDS-3UTR CAA 90 bp CTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATTTTCCCAAATTCACATaGATGCTGAGGCTCTTTATT +
Preference number: 5 (lower is better)
Translates to: LSHSFPVGKKWYREERANFPKFT*MLRLFI
Trigger: AATAAAGAGCCTCAGCATCAATGTGAATTTGGGAAA...ATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGGCAAATGGCTTGTTTGTATCCATCACTTCTTaGTTTCCCAAATTCACATTG +
Preference number: 5 (lower is better)
Translates to: SFPVGKKWYREERANGLFVSITS*FPKFTL
Trigger: CAATGTGAATTTGGGAAACAAAGAAGTGATGGATAC...AAACAAGCCATTTGCCCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000614410.4
CDS-3UTR CAA 90 bp TCTTTTTATATAGCTGGGCTCGCAGCCGGTATGACTTATATTCTGATTTTCTCTGTATCCATCACTTCTTaGTTTCCCAAATTCACATTG +
Preference number: 5 (lower is better)
Translates to: SFYIAGLAAGMTYILIFSVSITS*FPKFTL
Trigger: CAATGTGAATTTGGGAAACAAAGAAGTGATGGATAC...AGAGAAAATCAGAATATAAGTCATACCGGCTGCGAGCCCAGCTATATAAAAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000651434.1
ENST00000651750.1
ENST00000652487.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTTATTTCTCTGCTGTaGTCTACCACTCCATTCCTT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLISLL*STTPFL
Trigger: AAGGAATGGAGTGGTAGACAACAGCAGAGAAATAAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TCACATTGTTTTAGAGTTTATGTAAAGAGGGGCTTAGAGGTATTAACCCTCTCATTTTCTCCCCAGAAGTaGATTGGTCACTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: SHCFRVYVKRGLEVLTLSFSPQK*IGHSLF
Trigger: AAAAAGAGAGTGACCAATCAACTTCTGGGGAGAAAA...TGAGAGGGTTAATACCTCTAAGCCCCTCTTTACATAAACTCTAAAACAATGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000490821.1
CDS-3UTR CAA 90 bp GCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGTCTTTATCAGCTAAATaGTTTTCAGGCCACTGTGTA +
Preference number: 5 (lower is better)
Translates to: AESIAPKPLGILITTLFQSLSAK*FSGHCV
Trigger: TACACAGTGGCCTGAAAACAATTTAGCTGATAAAGA...CTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACTACACTTTCTCACTCTTTTCCAGTTGGTAAGAAATGGTATAGAGAGGAAAGGTCTTTATCAGCTAAATaGTTTTCAGGCCACTGTGTA +
Preference number: 5 (lower is better)
Translates to: TTLSHSFPVGKKWYREERSLSAK*FSGHCV
Trigger: TACACAGTGGCCTGAAAACAATTTAGCTGATAAAGA...CCTTTCCTCTCTATACCATTTCTTACCAACTGGAAAAGAGTGAGAAAGTGTAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614410.4
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATTCCGACTCTCTTGTaGGCTTTCTTTGTAGTTCAG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLIPTLL*AFFVVQ
Trigger: CTGAACTACAAAGAAAGCCAACAAGAGAGTCGGAAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TATTGCTCCCAAACCATTAGGAATTTTAATCACCACTTTGTTCCAGACTCTTTAATTCCGACTCTCTTGTaGGCTTTCTTTGTAGTTCAG +
Preference number: 5 (lower is better)
Translates to: YCSQTIRNFNHHFVPDSLIPTLL*AFFVVQ
Trigger: CTGAACTACAAAGAAAGCCAACAAGAGAGTCGGAAT...TAAAGAGTCTGGAACAAAGTGGTGATTAAAATTCCTAATGGTTTGGGAGCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCTACATATGGGGCTTaGCACTGTTCAAAGAGTTCT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSTYGA*HCSKSS
Trigger: AGAACTCTTTGAACAGTGCAAAGCCCCATATGTAGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGGGAGACCACAGTATaGAACTTGGCTTCAACATTT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLWETTV*NLASTF
Trigger: AAATGTTGAAGCCAAGTTCAATACTGTGGTCTCCCA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCAATAATTTGGAGGTaGGTTCCAGTGATCTCGAAG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSIIWR*VPVISK
Trigger: CTTCGAGATCACTGGAACCAACCTCCAAATTATTGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ATTGGACAAGGCCACTATGCAGAAAGTATTGCTCCCAAACCATTAGGAATTTTATGTTCTACTATTGCCTaGATATACTATCTGTTGCCA +
Preference number: 5 (lower is better)
Translates to: IGQGHYAESIAPKPLGILCSTIA*IYYLLP
Trigger: TGGCAACAGATAGTATATCAAGGCAATAGTAGAACA...TAAAATTCCTAATGGTTTGGGAGCAATACTTTCTGCATAGTGGCCTTGTCCAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613296.6
CDS-3UTR CAA 90 bp TTGGTGATGCTGCTATATAATTTAATTCGTCTGGGTGACAAGCATACTCTTTCATCTTGGACAAGTCAGTaGTTCTTCCATGACCAAATA +
Preference number: 5 (lower is better)
Translates to: LVMLLYNLIRLGDKHTLSSWTSQ*FFHDQI
Trigger: TATTTGGTCATGGAAGAACAACTGACTTGTCCAAGA...TGAAAGAGTATGCTTGTCACCCAGACGAATTAAATTATATAGCAGCATCACCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTACAGATTTGGCTGCTaGATATTGCCTAAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLYRFGC*ILPKSF
Trigger: GAAACTCTTAGGCAATATCAAGCAGCCAAATCTGTA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGGCATTCGAAGACCTTaGCTGATTTTGAATTCATCA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLGIRRP*LILNSS
Trigger: TGATGAATTCAAAATCAGCAAAGGTCTTCGAATGCC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAAATATCTTGATCACTaGGTAGGTGTACGGGATGAT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLKYLDH*VGVRDD
Trigger: ATCATCCCGTACACCTACCAAGTGATCAAGATATTT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAGTCTTGTCCATGTTTaGATAAGGAAGAGGAAGACA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSLVHV*IRKRKT
Trigger: TGTCTTCCTCTTCCTTATCAAAACATGGACAAGACT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCTGTTCAATTTTAATTaGATTAGACCTCCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLLFNFN*IRPPSS
Trigger: CGAGCTGGGAGGTCTAATCAAATTAAAATTGAACAG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTATCTCCTCTGTTGGTaGGTGATGCTGCTATATAAT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLYLLCW*VMLLYN
Trigger: ATTATATAGCAGCATCACCAACCAACAGAGGAGATA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTTTCTCCCCAGAAGTaGATTGGTCACTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLFSPQK*IGHSLF
Trigger: AAAAAGAGAGTGACCAATCAACTTCTGGGGAGAAAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACCAGGCTCTATAATTTCATGTCCACGATCTTCAGCATTAATAAAAATCTCAGATTTTCTCCCCAGAAGTaGATTGGTCACTCTCTTTTT +
Preference number: 5 (lower is better)
Translates to: TRLYNFMSTIFSINKNLRFSPQK*IGHSLF
Trigger: AAAAAGAGAGTGACCAATCAACTTCTGGGGAGAAAA...TCTGAGATTTTTATTAATGCTGAAGATCGTGGACATGAAATTATAGAGCCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGATATTCCGACTCTCTaGTTGGCTTTCTTTGTAGTT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLDIPTL*LAFFVV
Trigger: AACTACAAAGAAAGCCAACAAGAGAGTCGGAATATC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATCTCTGGGAGGATTTaGTTCTTCAGTGAAATGAGA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLISGRI*FFSEMR
Trigger: TCTCATTTCACTGAAGAACAAAATCCTCCCAGAGAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCATGGTTTTCTCTCATTaGATGATCTACATATGGGGC +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLMVFSH*MIYIWG
Trigger: GCCCCATATGTAGATCATCAAATGAGAGAAAACCAT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCAATGTTCACTTGTATTaGCCTGGAGGTTACTATCTG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLNVHLY*PGGYYL
Trigger: CAGATAGTAACCTCCAGGCAAATACAAGTGAACATT...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCTGTTATACTTGTCTaGGGTGAAACATATGGAAAG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSVILV*GETYGK
Trigger: CTTTCCATATGTTTCACCCAAGACAAGTATAACAGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp TTCACAATGGTGTGTAACTGTCACCACAATCTATTTCCAGAAGTTTTTCATCATTCTGTTATACTTGTCTaGGGTGAAACATATGGAAAG +
Preference number: 5 (lower is better)
Translates to: FTMVCNCHHNLFPEVFHHSVILV*GETYGK
Trigger: CTTTCCATATGTTTCACCCAAGACAAGTATAACAGA...ATGATGAAAAACTTCTGGAAATAGATTGTGGTGACAGTTACACACCATTGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651434.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTGCTATCTGTTATACTaGTCTTGGGTGAAACATATG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLCYLLY*SWVKHM
Trigger: CATATGTTTCACCCAAGACAAGTATAACAGATAGCA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCCAATCATGTGCTAAATaGAACTTCATATTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLQSCAK*NFIFQA
Trigger: TGCCTGGAATATGAAGTTCAATTTAGCACATGATTG...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCGGACTCTTCAATATaGATCTGTAGGGATTCTTTA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSDSSI*ICRDSL
Trigger: TAAAGAATCCCTACAGATCAATATTGAAGAGTCCGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTTTCCCAAATTCACATaGATGCTGAGGCTCTTTATT +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLFPKFT*MLRLFI
Trigger: AATAAAGAGCCTCAGCATCAATGTGAATTTGGGAAA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCGTATCCATCACTTCTTaGTTTCCCAAATTCACATTG +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLVSITS*FPKFTL
Trigger: CAATGTGAATTTGGGAAACAAAGAAGTGATGGATAC...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS-3UTR CAA 90 bp ACCAGGCTCTATAATTTCATGTCCACGATCTTCAGCATTAATAAAAATCTCAGAGTATCCATCACTTCTTaGTTTCCCAAATTCACATTG +
Preference number: 5 (lower is better)
Translates to: TRLYNFMSTIFSINKNLRVSITS*FPKFTL
Trigger: CAATGTGAATTTGGGAAACAAAGAAGTGATGGATAC...TCTGAGATTTTTATTAATGCTGAAGATCGTGGACATGAAATTATAGAGCCTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000423048.5
ENST00000651434.1
CDS-3UTR CAA 90 bp ACAAAGAATAAGCTTTATTCAACCAGACTCACAAAAGTAAGGATTCTGCTTCTCTCTTTATCAGCTAAATaGTTTTCAGGCCACTGTGTA +
Preference number: 5 (lower is better)
Translates to: TKNKLYSTRLTKVRILLLSLSAK*FSGHCV
Trigger: TACACAGTGGCCTGAAAACAATTTAGCTGATAAAGA...GAGAAGCAGAATCCTTACTTTTGTGAGTCTGGTTGAATAAAGCTTATTCTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS CCA 72 bp GCTCGCCCGGCCATGGCAGATCCTCGGGCTCCATGTTaGTGTCTCGCTCTGGGCGGCAGAGGAGGAGGAGGA +
Preference number: 6 (lower is better)
Translates to: ARPAMADPRAPC*CLALGGRGGGG
Trigger: TCCTCCTCCTCCTCTGCCGCCCAGAGCGAGACACCAACATGGAGCCCGAGGATCTGCCATGGCCGGGCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484298.5
CDS CAA 72 bp AGCTCGCCCGGCCATGGCAGATCCTCGGGCTCCATGTaGGTGTCTCGCTCTGGGCGGCAGAGGAGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: SSPGHGRSSGSM*VSRSGRQRRRR
Trigger: CCTCCTCCTCCTCTGCCGCCCAGAGCGAGACACCAACATGGAGCCCGAGGATCTGCCATGGCCGGGCGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484298.5
CDS CCA 72 bp CTCCTCCTCCTCCTCCTCCTCCAGCTCGCCCGGCCATaGCAGATCCTCGGGCTCCATGTTGGTGTCTCGCTC +
Preference number: 6 (lower is better)
Translates to: LLLLLLLQLARP*QILGLHVGVSL
Trigger: GAGCGAGACACCAACATGGAGCCCGAGGATCTGCCATGGCCGGGCGAGCTGGAGGAGGAGGAGGAGGAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484298.5
ENST00000613296.6
CDS CCA 72 bp CCACTCTCCAGGAGCTCATCCCTCTCAGAAAGGCCCTaGGCCCCGTTAGATACTCCAGCACAGAAAACCCTA +
Preference number: 6 (lower is better)
Translates to: PLSRSSSLSERP*APLDTPAQKTL
Trigger: TAGGGTTTTCTGTGCTGGAGTATCTAACGGGGCCCAGGGCCTTTCTGAGAGGGATGAGCTCCTGGAGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683147.1
CDS GCA 72 bp CCAGTGAAAGGACAGAAATCGGGGAGGTTACCAGGGTaGAGAGTCATGAGATCTCCTCTCATCATCCCTCCC +
Preference number: 6 (lower is better)
Translates to: PVKGQKSGRLPG*RVMRSPLIIPP
Trigger: GGGAGGGATGATGAGAGGAGATCTCATGACTCTGCACCCTGGTAACCTCCCCGATTTCTGTCCTTTCACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000683108.1
ENST00000683147.1
CDS CCA 72 bp AAACGACTCCAGAGAGACCCCCTGCCCCTTCCACCATaGGAGGGCACAGAGGAACATGTCATCTATGACAAA +
Preference number: 6 (lower is better)
Translates to: KRLQRDPLPLPP*EGTEEHVIYDK
Trigger: TTTGTCATAGATGACATGTTCCTCTGTGCCCTCCCATGGTGGAAGGGGCAGGGGGTCTCTCTGGAGTCGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682889.1
CDS GCA 72 bp AGGTTGACATGCTTGGCTCTGCATGATGATGGGTTCTaGCGTCCTCTGGTCATTTCTGAGGGTCCAGCAGAT +
Preference number: 6 (lower is better)
Translates to: RLTCLALHDDGF*RPLVISEGPAD
Trigger: ATCTGCTGGACCCTCAGAAATGACCAGAGGACGGCAGAACCCATCATCATGCAGAGCCAAGCATGTCAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CCA 72 bp TTGTGCCTAGCACCTGAGCTGGGAAGTCTGGAGCAATaGCATCATTGGATCCATCTGTGCCGCGAGAAAAAG +
Preference number: 6 (lower is better)
Translates to: LCLAPELGSLEQ*HHWIHLCREKK
Trigger: CTTTTTCTCGCGGCACAGATGGATCCAATGATGCCATTGCTCCAGACTTCCCAGCTCAGGTGCTAGGCACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000651057.1
ENST00000684656.1
CDS TCA 72 bp AGCTTCCTAGTCCCTTACAGCAGGGACTGCTCTTGCTaGGGTGAGAGTATTAGTAGCTGCCCCACAACAAAC +
Preference number: 6 (lower is better)
Translates to: SFLVPYSRDCSC*GESISSCPTTN
Trigger: GTTTGTTGTGGGGCAGCTACTAATACTCTCACCTCAGCAAGAGCAGTCCCTGCTGTAAGGGACTAGGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683147.1
CDS TCA 72 bp CTGCTGCTTGGGCTTTCCTCTGTGAATGGCTGTCTGTaGAGCAAATCACCATTAGATACACCCGTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: LLLGLSSVNGCL*SKSPLDTPVEE
Trigger: CTCTTCCACGGGTGTATCTAATGGTGATTTGCTTCACAGACAGCCATTCACAGAGGAAAGCCCAAGCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000651434.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684197.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS TCA 72 bp GCCGTCCTCTGGTCATTTCTGAGGGTCCAGCAGATCTaGAAGCACAAGGGTGTCTATCTAGTTGTGGATGTT +
Preference number: 6 (lower is better)
Translates to: AVLWSFLRVQQI*KHKGVYLVVDV
Trigger: AACATCCACAACTAGATAGACACCCTTGTGCTTTCAGATCTGCTGGACCCTCAGAAATGACCAGAGGACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CAA 72 bp TTGTTCTGGTCTAAGGATGCAGAAAGGTTGACATGCTaGGCTCTGCATGATGATGGGTTCTGCCGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LFWSKDAERLTC*ALHDDGFCRPL
Trigger: CAGAGGACGGCAGAACCCATCATCATGCAGAGCCAAGCATGTCAACCTTTCTGCATCCTTAGACCAGAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS TCA 72 bp AATGGGAGTTGTTCTGGTCTAAGGATGCAGAAAGGTTaGCATGCTTGGCTCTGCATGATGATGGGTTCTGCC +
Preference number: 6 (lower is better)
Translates to: NGSCSGLRMQKG*HAWLCMMMGSA
Trigger: GGCAGAACCCATCATCATGCAGAGCCAAGCATGTCAACCTTTCTGCATCCTTAGACCAGAACAACTCCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS TCA 72 bp GAAGGAGGAGTAGATGCAGATGCTGCTAATGTACAGTaGTTTGGGGCTGACTGGGAGACCACAGTATTGAAC +
Preference number: 6 (lower is better)
Translates to: EGGVDADAANVQ*FGADWETTVLN
Trigger: GTTCAATACTGTGGTCTCCCAGTCAGCCCCAAATCACTGTACATTAGCAGCATCTGCATCTACTCCTCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000652487.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CCA 72 bp GATGACTATTGGGTAAGGTCTGCTGATAGAAAGCACTaGGCTTTTCTCCAAGTGAAGAGGACGCAGAGGAAG +
Preference number: 6 (lower is better)
Translates to: DDYWVRSADRKH*AFLQVKRTQRK
Trigger: CTTCCTCTGCGTCCTCTTCACTTGGAGAAAAGCCCAGTGCTTTCTATCAGCAGACCTTACCCAATAGTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684548.1
CDS CAA 72 bp CAGGCTCCAGAGACACAAATCCTTAATAGGACACAATaGAAGGCCAAACACCAGGCTCTAACTCCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: QAPETQILNRTQ*KAKHQALTPAV
Trigger: CACAGCTGGAGTTAGAGCCTGGTGTTTGGCCTTCAATTGTGTCCTATTAAGGATTTGTGTCTCTGGAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683147.1
CDS CAA 72 bp CCTTTGCCACCAAGGAACAATTGGTACAGTTCCTCTTaGGTCTTGGCACAGAGAAGCAGTCTTAAACCTCCG +
Preference number: 6 (lower is better)
Translates to: PLPPRNNWYSSS*VLAQRSSLKPP
Trigger: CGGAGGTTTAAGACTGCTTCTCTGTGCCAAGACCAAAGAGGAACTGTACCAATTGTTCCTTGGTGGCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS CAA 90 bp AAATGGGAGTTGTTCTGGTCTAAGGATGCAGAAAGGTTGACATGCTaGGCTCTGCATGATGATGGGTTCTGCCGTCCTCTGGTCATTTCT +
Preference number: 6 (lower is better)
Translates to: KWELFWSKDAERLTC*ALHDDGFCRPLVIS
Trigger: AGAAATGACCAGAGGACGGCAGAACCCATCATCATGCAGAGCCAAGCATGTCAACCTTTCTGCATCCTTAGACCAGAACAACTCCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CAA 90 bp CAAACTTTGAAATGGGAGTTGTTCTGGTCTAAGGATGCAGAAAGGTaGACATGCTTGGCTCTGCATGATGATGGGTTCTGCCGTCCTCTG +
Preference number: 6 (lower is better)
Translates to: QTLKWELFWSKDAER*TCLALHDDGFCRPL
Trigger: CAGAGGACGGCAGAACCCATCATCATGCAGAGCCAAGCATGTCAACCTTTCTGCATCCTTAGACCAGAACAACTCCCATTTCAAAGTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CCA 72 bp TTGGATCCATCTGTGCCGCGAGAAAAAGTAACCTGTTaGACTGAAGATGATGAGGCAAACTTGACAGGAGCT +
Preference number: 6 (lower is better)
Translates to: LDPSVPREKVTC*TEDDEANLTGA
Trigger: AGCTCCTGTCAAGTTTGCCTCATCATCTTCAGTCCAACAGGTTACTTTTTCTCGCGGCACAGATGGATCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684656.1
CDS CAA 72 bp AAATGGGAGTTGTTCTGGTCTAAGGATGCAGAAAGGTaGACATGCTTGGCTCTGCATGATGATGGGTTCTGC +
Preference number: 6 (lower is better)
Translates to: KWELFWSKDAER*TCLALHDDGFC
Trigger: GCAGAACCCATCATCATGCAGAGCCAAGCATGTCAACCTTTCTGCATCCTTAGACCAGAACAACTCCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS TCA 72 bp AACAGGCCCTCACAAGACACTGAATCTCCCAGCACTTaGTCTTGGAACCAGCCTCTAGAACTGCTTTTAAAT +
Preference number: 6 (lower is better)
Translates to: NRPSQDTESPST*SWNQPLELLLN
Trigger: ATTTAAAAGCAGTTCTAGAGGCTGGTTCCAAGATCAAGTGCTGGGAGATTCAGTGTCTTGTGAGGGCCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682889.1
CDS TCA 72 bp TGCGGGAAACACATTAGAGAAGGTGAAGGTGTCTCCTaGAGGCCACTCTGGAACAAGTGCTTCCAAATAAAA +
Preference number: 6 (lower is better)
Translates to: CGKHIREGEGVS*RPLWNKCFQIK
Trigger: TTTTATTTGGAAGCACTTGTTCCAGAGTGGCCTTCAGGAGACACCTTCACCTTCTCTAATGTGTTTCCCGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683147.1
CDS CCA 72 bp CTGCTTGCTAAGTCTGAAGCTACTTCTGCAGTAGCCTaGAATAAAGCTTCACTAACTTCCGATGGTCGAGAA +
Preference number: 6 (lower is better)
Translates to: LLAKSEATSAVA*NKASLTSDGRE
Trigger: TTCTCGACCATCGGAAGTTAGTGAAGCTTTATTCCAGGCTACTGCAGAAGTAGCTTCAGACTTAGCAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000682565.1
ENST00000682675.1
ENST00000682801.1
ENST00000682859.1
ENST00000682889.1
ENST00000683791.1
ENST00000684548.1
CDS CCA 72 bp CTTGAACTGAGGCATCTGAATGGGAGCTTTCAACGGTaGTATCTGATTTGGAATCCGGAGATGGAGGAATTT +
Preference number: 6 (lower is better)
Translates to: LELRHLNGSFQR*YLIWNPEMEEF
Trigger: AAATTCCTCCATCTCCGGATTCCAAATCAGATACCACCGTTGAAAGCTCCCATTCAGATGCCTCAGTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684460.1
CDS CCA 72 bp CTCTGCATTTTCATTCTGCAAGGGTTTTTCTCCCACTaGCAAGGATGCCTTAGTCACTACCCTCTTACTGTA +
Preference number: 6 (lower is better)
Translates to: LCIFILQGFFSH*QGCLSHYPLTV
Trigger: TACAGTAAGAGGGTAGTGACTAAGGCATCCTTGCCAGTGGGAGAAAAACCCTTGCAGAATGAAAATGCAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683791.1
CDS CCA 72 bp CACCAAGGAACAATTGGTACAGTTCCTCTTTGGTCTTaGCACAGAGAAGCAGTCTTAAACCTCCGTAACAGT +
Preference number: 6 (lower is better)
Translates to: HQGTIGTVPLWS*HREAVLNLRNS
Trigger: ACTGTTACGGAGGTTTAAGACTGCTTCTCTGTGCCAAGACCAAAGAGGAACTGTACCAATTGTTCCTTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS TCA 72 bp CACAGTGTCAGGAGACATCCTCAACATTCTGAGATCTaGAGAGTGATATTCCGACTCTCTTGTTGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: HSVRRHPQHSEI*RVIFRLSCWLS
Trigger: AGAAAGCCAACAAGAGAGTCGGAATATCACTCTTCAGATCTCAGAATGTTGAGGATGTCTCCTGACACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000682889.1
CDS TCA 72 bp TGGGGTCCCCTCTGGATTGGAATGTCCTTCGAAATCTaGAATGTTCACTTGTATTTGCCTGGAGGTTACTAT +
Preference number: 6 (lower is better)
Translates to: WGPLWIGMSFEI*NVHLYLPGGYY
Trigger: ATAGTAACCTCCAGGCAAATACAAGTGAACATTTCAGATTTCGAAGGACATTCCAATCCAGAGGGGACCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000652487.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS TCA 72 bp CACAGTGTCAGGAGACATCCTCAACATTCTGAGATCTaGAGAGTGATATTCCGACTCTCTTGTTGGCTTATG +
Preference number: 6 (lower is better)
Translates to: HSVRRHPQHSEI*RVIFRLSCWLM
Trigger: CATAAGCCAACAAGAGAGTCGGAATATCACTCTTCAGATCTCAGAATGTTGAGGATGTCTCCTGACACTGTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684548.1
CDS TCA 72 bp CACAGTGTCAGGAGACATCCTCAACATTCTGAGATCTaGAGAGTGATATTCCGACTCTCTTGTTGGTGGTTA +
Preference number: 6 (lower is better)
Translates to: HSVRRHPQHSEI*RVIFRLSCWWL
Trigger: TAACCACCAACAAGAGAGTCGGAATATCACTCTTCAGATCTCAGAATGTTGAGGATGTCTCCTGACACTGTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683791.1
CDS GCA 72 bp TCTGCCTGCTTAGATGAATCTTCCTGTGTCCAATACTaGCCATATGAACGAGCAGCATCAAAATGGTCACTT +
Preference number: 6 (lower is better)
Translates to: SACLDESSCVQY*PYERAASKWSL
Trigger: AAGTGACCATTTTGATGCTGCTCGTTCATATGGGCAGTATTGGACACAGGAAGATTCATCTAAGCAGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000682565.1
ENST00000682675.1
ENST00000682801.1
ENST00000682859.1
ENST00000682889.1
ENST00000683791.1
ENST00000684548.1
CDS CAA 72 bp TTTATTCATTTGGTCATCTACACCTGGCGCTTTGCTTaGGCATTGTTCAAGAGAAATGGGAGACGGAAGGTC +
Preference number: 6 (lower is better)
Translates to: FIHLVIYTWRFA*ALFKRNGRRKV
Trigger: GACCTTCCGTCTCCCATTTCTCTTGAACAATGCCAAAGCAAAGCGCCAGGTGTAGATGACCAAATGAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS TCA 72 bp ATTCTGAAATGGAGTATCCACAATCATGTGCTAAATTaGACTTCATATTCCAGGCATGTGCTCGTACCCGGC +
Preference number: 6 (lower is better)
Translates to: ILKWSIHNHVLN*TSYSRHVLVPG
Trigger: GCCGGGTACGAGCACATGCCTGGAATATGAAGTTCAATTTAGCACATGATTGTGGATACTCCATTTCAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000651434.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684197.1
ENST00000684460.1
ENST00000684548.1
ENST00000684656.1
CDS TCA 72 bp TCAGGAGACATCCTCAACATTCTGAGATCTGAAGAGTaGTATTCCGACTCTCTTGTTGGCTTATGTGGAACA +
Preference number: 6 (lower is better)
Translates to: SGDILNILRSEE*YSDSLVGLCGT
Trigger: TGTTCCACATAAGCCAACAAGAGAGTCGGAATATCACTCTTCAGATCTCAGAATGTTGAGGATGTCTCCTGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684548.1
CDS CCA 72 bp GTAATCGATCTGCAAATACTGGGGTCCCCTCTGGATTaGAATGTCCTTCGAAATCTGAAATGTTCACTTGTA +
Preference number: 6 (lower is better)
Translates to: VIDLQILGSPLD*NVLRNLKCSLV
Trigger: TACAAGTGAACATTTCAGATTTCGAAGGACATTCCAATCCAGAGGGGACCCCAGTATTTGCAGATCGATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000652487.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CCA 72 bp CATCTGAATGGGAGCTTTCAACGGTGGTATCTGATTTaGAATCCGGAGATGGAGGAATTTGTCTTAATTGTG +
Preference number: 6 (lower is better)
Translates to: HLNGSFQRWYLI*NPEMEEFVLIV
Trigger: CACAATTAAGACAAATTCCTCCATCTCCGGATTCCAAATCAGATACCACCGTTGAAAGCTCCCATTCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684460.1
CDS CAA 72 bp TCTCACATTAAACCTAGTCTGGGATGTATCCAAGGTTaGGGAAGAGTCCATTTCTTGAGGAAGACAATGCCA +
Preference number: 6 (lower is better)
Translates to: SHIKPSLGCIQG*GRVHFLRKTMP
Trigger: TGGCATTGTCTTCCTCAAGAAATGGACTCTTCCCAAACCTTGGATACATCCCAGACTAGGTTTAATGTGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000682565.1
ENST00000682675.1
ENST00000682801.1
ENST00000682859.1
ENST00000682889.1
ENST00000684148.1
ENST00000684548.1
CDS CAA 90 bp ATCTTCCGTTCTCACATTAAACCTAGTCTGGGATGTATCCAAGGTTaGGGAAGAGTCCATTTCTTGAGGAAGACAATGCCAAGATTCTGT +
Preference number: 6 (lower is better)
Translates to: IFRSHIKPSLGCIQG*GRVHFLRKTMPRFC
Trigger: ACAGAATCTTGGCATTGTCTTCCTCAAGAAATGGACTCTTCCCAAACCTTGGATACATCCCAGACTAGGTTTAATGTGAGAACGGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000682565.1
ENST00000682675.1
ENST00000682801.1
ENST00000682859.1
ENST00000682889.1
ENST00000684148.1
ENST00000684548.1
CDS CAA 90 bp AGAAGATGGGCACTAAATCCACTCATATATTTCTCGTCGAAAGCATaGATACATTTTAGGAGATGTCCTGGCTGTCTTCCTGTAGGCAAG +
Preference number: 6 (lower is better)
Translates to: RRWALNPLIYFSSKA*IHFRRCPGCLPVGK
Trigger: CTTGCCTACAGGAAGACAGCCAGGACATCTCCTAAAATGTATCAATGCTTTCGACGAGAAATATATGAGTGGATTTAGTGCCCATCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683147.1
CDS CAA 90 bp CCCCCTGAAATTACTGCAAATCTAGAGTTCACAGAGCTCACCATGTaGTCATCTGTCCTTTACTTAGTCAAAACACATACTGTCACTGCT +
Preference number: 6 (lower is better)
Translates to: PPEITANLEFTELTM*SSVLYLVKTHTVTA
Trigger: AGCAGTGACAGTATGTGTTTTGACTAAGTAAAGGACAGATGACAACATGGTGAGCTCTGTGAACTCTAGATTTGCAGTAATTTCAGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS TCA 72 bp CCTTCAGGTTCAGACCTCATTACAGATTTGGCTGCTTaGTATTGCCTAAGAGTTTCTTCTAATGCCATACTG +
Preference number: 6 (lower is better)
Translates to: PSGSDLITDLAA*YCLRVSSNAIL
Trigger: CAGTATGGCATTAGAAGAAACTCTTAGGCAATATCAAGCAGCCAAATCTGTAATGAGGTCTGAACCTGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000651434.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684197.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS TCA 72 bp TCAGGAGACATCCTCAACATTCTGAGATCTGAAGAGTaGTATTCCGACTCTCTTGTTGGCTTTCTTTGTAGT +
Preference number: 6 (lower is better)
Translates to: SGDILNILRSEE*YSDSLVGFLCS
Trigger: ACTACAAAGAAAGCCAACAAGAGAGTCGGAATATCACTCTTCAGATCTCAGAATGTTGAGGATGTCTCCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000682889.1
CDS GCA 72 bp CTAACCATTCTGGCACCAGCCATCATCAATTACATTTaGCATTGGCGAGAGCCTATTTATCACAATGTTAGT +
Preference number: 6 (lower is better)
Translates to: LTILAPAIINYI*HWREPIYHNVS
Trigger: ACTAACATTGTGATAAATAGGCTCTCGCCAATGGCAAATGTAATTGATGATGGCTGGTGCCAGAATGGTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS CCA 72 bp ACTTCAGTATCTTCCGTTCTCACATTAAACCTAGTCTaGGATGTATCCAAGGTTTGGGAAGAGTCCATTTCT +
Preference number: 6 (lower is better)
Translates to: TSVSSVLTLNLV*DVSKVWEESIS
Trigger: AGAAATGGACTCTTCCCAAACCTTGGATACATCCCAGACTAGGTTTAATGTGAGAACGGAAGATACTGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000682565.1
ENST00000682675.1
ENST00000682801.1
ENST00000682859.1
ENST00000682889.1
ENST00000684148.1
ENST00000684548.1
CDS CCA 72 bp CTTGATCCTGTGCTACAGGTTTACTGGTCAATAATTTaGAGGTTGGTTCCAGTGATCTCGAAGATACAGTAT +
Preference number: 6 (lower is better)
Translates to: LDPVLQVYWSII*RLVPVISKIQY
Trigger: ATACTGTATCTTCGAGATCACTGGAACCAACCTCCAAATTATTGACCAGTAAACCTGTAGCACAGGATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000652487.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CCA 72 bp ATAGTGTTACTGTCTGGAAGAGAAGGCTGTACGACTTaGAAATCCAGTGAAGATTTAGGTCCTAGAAAACCT +
Preference number: 6 (lower is better)
Translates to: IVLLSGREGCTT*KSSEDLGPRKP
Trigger: AGGTTTTCTAGGACCTAAATCTTCACTGGATTTCCAAGTCGTACAGCCTTCTCTTCCAGACAGTAACACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000652487.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CAA 72 bp AATTCTGAAATGGAGTATCCACAATCATGTGCTAAATaGAACTTCATATTCCAGGCATGTGCTCGTACCCGG +
Preference number: 6 (lower is better)
Translates to: NSEMEYPQSCAK*NFIFQACARTR
Trigger: CCGGGTACGAGCACATGCCTGGAATATGAAGTTCAATTTAGCACATGATTGTGGATACTCCATTTCAGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000651434.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000684197.1
ENST00000684460.1
ENST00000684548.1
ENST00000684656.1
CDS CAA 72 bp CCTGTGCTACAGGTTTACTGGTCAATAATTTGGAGGTaGGTTCCAGTGATCTCGAAGATACAGTATGTAAGT +
Preference number: 6 (lower is better)
Translates to: PVLQVYWSIIWR*VPVISKIQYVS
Trigger: ACTTACATACTGTATCTTCGAGATCACTGGAACCAACCTCCAAATTATTGACCAGTAAACCTGTAGCACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000652487.1
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CAA 72 bp TTGCCATGCCTTTTTCTTACAGCTTTCAACTGCTTCTaGTTTCCTCAAGTGTGGATATCTGTTACTGGCTTG +
Preference number: 6 (lower is better)
Translates to: LPCLFLTAFNCF*FPQVWISVTGL
Trigger: CAAGCCAGTAACAGATATCCACACTTGAGGAAACAAGAAGCAGTTGAAAGCTGTAAGAAAAAGGCATGGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS CAA 90 bp GCAGATGGACAGTACAAAATCAAGACTTGGCCTGTAAGCTATAGTTaGCAGACTCCTGCTCTACACCATTATAATACAAATCCCATGGTA +
Preference number: 6 (lower is better)
Translates to: ADGQYKIKTWPVSYS*QTPALHHYNTNPMV
Trigger: TACCATGGGATTTGTATTATAATGGTGTAGAGCAGGAGTCTGCAAACTATAGCTTACAGGCCAAGTCTTGATTTTGTACTGTCCATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS CAA 90 bp TTTCCTCAAGTGTGGATATCTGTTACTGGCTTGCATCCCTCTTTTTaGAGGTATCTAACCATTCTGGCACCAGCCATCATCAATTACATT +
Preference number: 6 (lower is better)
Translates to: FPQVWISVTGLHPSF*RYLTILAPAIINYI
Trigger: AATGTAATTGATGATGGCTGGTGCCAGAATGGTTAGATACCTCAAAAAAGAGGGATGCAAGCCAGTAACAGATATCCACACTTGAGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS CAA 90 bp GTATTTTACTTGCCATGCCTTTTTCTTACAGCTTTCAACTGCTTCTaGTTTCCTCAAGTGTGGATATCTGTTACTGGCTTGCATCCCTCT +
Preference number: 6 (lower is better)
Translates to: VFYLPCLFLTAFNCF*FPQVWISVTGLHPS
Trigger: AGAGGGATGCAAGCCAGTAACAGATATCCACACTTGAGGAAACAAGAAGCAGTTGAAAGCTGTAAGAAAAAGGCATGGCAAGTAAAATAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS CAA 90 bp CAGGGTGGAGTTGGACAGTTAAATCACATAAATAGGCAAATGTATTaGCTAAAGGAGCAGGCCAAAGCTGAAGAGTTAATGATTCTCAAG +
Preference number: 6 (lower is better)
Translates to: QGGVGQLNHINRQMY*LKEQAKAEELMILK
Trigger: CTTGAGAATCATTAACTCTTCAGCTTTGGCCTGCTCCTTTAGCAAATACATTTGCCTATTTATGTGATTTAACTGTCCAACTCCACCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS TCA 72 bp AAATTGCTACAATTTGCCCTGGTACTGGGCTCAGAATaGCTGCCTGTAAAATCTGATCTTTCTAAGGGTTTT +
Preference number: 6 (lower is better)
Translates to: KLLQFALVLGSE*LPVKSDLSKGF
Trigger: AAAACCCTTAGAAAGATCAGATTTTACAGGCAGTCATTCTGAGCCCAGTACCAGGGCAAATTGTAGCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS TCA 72 bp CTGAAGACAGAACGGGTAGTATTTTCAAATTCTGAATaGCATTCGGACTCTGCATTTTCATTCTGCAAGGGT +
Preference number: 6 (lower is better)
Translates to: LKTERVVFSNSE*HSDSAFSFCKG
Trigger: ACCCTTGCAGAATGAAAATGCAGAGTCCGAATGTCATTCAGAATTTGAAAATACTACCCGTTCTGTCTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683791.1
CDS GCA 72 bp ATCAGAAATCTGAATTTCCTTGAAATTGCTACAATTTaGCCTGGTACTGGGCTCAGAATGACTGCCTGTAAA +
Preference number: 6 (lower is better)
Translates to: IRNLNFLEIATI*PGTGLRMTACK
Trigger: TTTACAGGCAGTCATTCTGAGCCCAGTACCAGGGCAAATTGTAGCAATTTCAAGGAAATTCAGATTTCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CAA 72 bp TTTAACTGCAAGGAATTCCAAACTTTGAAATGGGAGTaGTTCTGGTCTAAGGATGCAGAAAGGTTGACATGC +
Preference number: 6 (lower is better)
Translates to: FNCKEFQTLKWE*FWSKDAERLTC
Trigger: GCATGTCAACCTTTCTGCATCCTTAGACCAGAACAACTCCCATTTCAAAGTTTGGAATTCCTTGCAGTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CAA 72 bp GCACTAAATCCACTCATATATTTCTCGTCGAAAGCATaGATACATTTTAGGAGATGTCCTGGCTGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: ALNPLIYFSSKA*IHFRRCPGCLP
Trigger: AGGAAGACAGCCAGGACATCTCCTAAAATGTATCAATGCTTTCGACGAGAAATATATGAGTGGATTTAGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683147.1
CDS CAA 90 bp AGTATCAGAAATTTGTGTTCTACTATTGCCTTGATATACTATCTGTaGCCATACATGACAGGTCAATGGAACAATCTTCTCCAGGGAGGT +
Preference number: 6 (lower is better)
Translates to: SIRNLCSTIALIYYL*PYMTGQWNNLLQGG
Trigger: ACCTCCCTGGAGAAGATTGTTCCATTGACCTGTCATGTATGGCAACAGATAGTATATCAAGGCAATAGTAGAACACAAATTTCTGATACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613296.6
ENST00000614410.4
ENST00000682675.1
ENST00000682889.1
CDS CAA 90 bp CCGCTGAGCTGTTGTTTCCAAACAGACCACATTAGTATCAGAAATTaGTGTTCTACTATTGCCTTGATATACTATCTGTTGCCATACATG +
Preference number: 6 (lower is better)
Translates to: PLSCCFQTDHISIRN*CSTIALIYYLLPYM
Trigger: CATGTATGGCAACAGATAGTATATCAAGGCAATAGTAGAACACAAATTTCTGATACTAATGTGGTCTGTTTGGAAACAACAGCTCAGCGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000613296.6
ENST00000614410.4
ENST00000682675.1
ENST00000682889.1
CDS CAA 90 bp TCACCCTCTTGTTTTAATCTTCAGTCTATCCACTTCCCATCTAAATaGTCAACTGTGTCTACTTTATCCATAGCTATATCCTCAGTGCCT +
Preference number: 6 (lower is better)
Translates to: SPSCFNLQSIHFPSK*STVSTLSIAISSVP
Trigger: AGGCACTGAGGATATAGCTATGGATAAAGTAGACACAGTTGACAATTTAGATGGGAAGTGGATAGACTGAAGATTAAAACAAGAGGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS TCA 72 bp CTGCCCATGCTAATAAGGGTATGGTTATCAGAAATCTaGATTTCCTTGAAATTGCTACAATTTGCCCTGGTA +
Preference number: 6 (lower is better)
Translates to: LPMLIRVWLSEI*ISLKLLQFALV
Trigger: TACCAGGGCAAATTGTAGCAATTTCAAGGAAATTCAGATTTCTGATAACCATACCCTTATTAGCATGGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CCA 72 bp ATTCTGGCACCAGCCATCATCAATTACATTTGCCATTaGCGAGAGCCTATTTATCACAATGTTAGTACTTAT +
Preference number: 6 (lower is better)
Translates to: ILAPAIINYICH*REPIYHNVSTY
Trigger: ATAAGTACTAACATTGTGATAAATAGGCTCTCGCCAATGGCAAATGTAATTGATGATGGCTGGTGCCAGAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS TCA 72 bp AGAGGAATTGGAAATGCATTTAGAATGTCGGTGAGATaGAAAAGTGATGGAGGTAGTAAACTTTTTCATGGG +
Preference number: 6 (lower is better)
Translates to: RGIGNAFRMSVR*KSDGGSKLFHG
Trigger: CCCATGAAAAAGTTTACTACCTCCATCACTTTTTCATCTCACCGACATTCTAAATGCATTTCCAATTCCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000423048.5
ENST00000484298.5
ENST00000613296.6
ENST00000614410.4
ENST00000620466.4
ENST00000682565.1
ENST00000682801.1
ENST00000682859.1
ENST00000683791.1
ENST00000684460.1
ENST00000684548.1
ENST00000684590.1
ENST00000684656.1
CDS CAA 72 bp CAGTACAAAATCAAGACTTGGCCTGTAAGCTATAGTTaGCAGACTCCTGCTCTACACCATTATAATACAAAT +
Preference number: 6 (lower is better)
Translates to: QYKIKTWPVSYS*QTPALHHYNTN
Trigger: ATTTGTATTATAATGGTGTAGAGCAGGAGTCTGCAAACTATAGCTTACAGGCCAAGTCTTGATTTTGTACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS GCA 72 bp ATCTGTCCTTTACTTAGTCAAAACACATACTGTCACTaGTTATATACCCTGCATACCTTCCATATAATTCAT +
Preference number: 6 (lower is better)
Translates to: ICPLLSQNTYCH*LYTLHTFHIIH
Trigger: ATGAATTATATGGAAGGTATGCAGGGTATATAAGCAGTGACAGTATGTGTTTTGACTAAGTAAAGGACAGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684148.1
CDS CAA 72 bp TGTTTTAATCTTCAGTCTATCCACTTCCCATCTAAATaGTCAACTGTGTCTACTTTATCCATAGCTATATCC +
Preference number: 6 (lower is better)
Translates to: CFNLQSIHFPSK*STVSTLSIAIS
Trigger: GGATATAGCTATGGATAAAGTAGACACAGTTGACAATTTAGATGGGAAGTGGATAGACTGAAGATTAAAACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000684148.1