RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALDH6A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000119711

Ensembl transcript IDs: ENST00000350259.8, ENST00000553458.6, ENST00000553814.5, ENST00000554231.5, ENST00000554501.5, ENST00000555126.1, ENST00000556852.1

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAATaGAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAG +
Preference number: 1 (lower is better)
Translates to: NVFQSHRSDLSKADK*SWSKIKGDYSGWSQ
Trigger: CTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
3UTR TCA 90 bp AAAATGTGTACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTaGCTCTTAGCTTTCCATCACAGGTGGGAAGTCAGAGTCATTACA +
Preference number: 1 (lower is better)
Translates to: KMCTIFYVRVNIVTL*LLAFHHRWEVRVIT
Trigger: TGTAATGACTCTGACTTCCCACCTGTGATGGAAAGCTAAGAGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGTACACATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR TCA 90 bp AATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTGGAGAGGTTGCGGTGAGCTaGGATCACGCCATTGCACTC +
Preference number: 2 (lower is better)
Translates to: NSRLDLLKAGVLPIFMVGEVAVS*DHAIAL
Trigger: GAGTGCAATGGCGTGATCTCAGCTCACCGCAACCTC...TCCAACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR CCA 90 bp CTTCTGGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACAAAAATTATCCGGGTGTaGGGGCATGCACCTGTAATC +
Preference number: 2 (lower is better)
Translates to: LLVKWCYPLFQKNLRSLTKIIRV*GHAPVI
Trigger: GATTACAGGTGCATGCCCCCACACCCGGATAATTTT...TGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACCAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR CCA 90 bp GTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGTCTTTTGTGAGCCACCGCGCCTaGCTGGAACATTTTCTTTAC +
Preference number: 2 (lower is better)
Translates to: VVVISLKSTGYTTFSRSFVSHRA*LEHFLY
Trigger: GTAAAGAAAATGTTCCAGCCAGGCGCGGTGGCTCAC...AAAAGACCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR CCA 90 bp GTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGTCTTTTACGTTCTTCAACTCCTaGGCTCAAGCAATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: VVVISLKSTGYTTFSRSFTFFNS*AQAICP
Trigger: TGGGCAGATTGCTTGAGCCCAGGAGTTGAAGAACGT...AAAAGACCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR TCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATACCCATCGATCTGATCTaGGCAAAGCTGACAAATGAA +
Preference number: 2 (lower is better)
Translates to: WFHCYTRQFPIETLRGLIPIDLI*AKLTNE
Trigger: TTCATTTGTCAGCTTTGCTCAGATCAGATCGATGGG...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
3UTR-3UTR CCA 90 bp CTTCTGGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACAAGGATTCAATTGGATTaGTACTGCAAAAAGAATCCA +
Preference number: 2 (lower is better)
Translates to: LLVKWCYPLFQKNLRSLTRIQLD*YCKKNP
Trigger: TGGATTCTTTTTGCAGTACCAATCCAATTGAATCCT...TGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACCAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR CAA 90 bp GAGTCTGACACAGTAAGGAGTCTGTATCTAATCAAACAATGTATATaGTTGTCACCCTTCCCCATGTCGCTTCTTGCTAAATCACGGTTA +
Preference number: 2 (lower is better)
Translates to: ESDTVRSLYLIKQCI*LSPFPMSLLAKSRL
Trigger: TAACCGTGATTTAGCAAGAAGCGACATGGGGAAGGGTGACAACAATATACATTGTTTGATTAGATACAGACTCCTTACTGTGTCAGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR TCA 90 bp AGCCAGGTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGAGCAAAGCTGACAAATaGAGCTGGTCAAAAATAAAG +
Preference number: 2 (lower is better)
Translates to: SQVVVISLKSTGYTTFSRSKADK*SWSKIK
Trigger: CTTTATTTTTGACCAGCTTCATTTGTCAGCTTTGCT...CCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCACCTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR TCA 90 bp GTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGTCTTTTCCCATCGATCTGATCTaGGCAAAGCTGACAAATGAA +
Preference number: 2 (lower is better)
Translates to: VVVISLKSTGYTTFSRSFPIDLI*AKLTNE
Trigger: TTCATTTGTCAGCTTTGCTCAGATCAGATCGATGGG...AAAAGACCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR TCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAAGCAAAGCTGACAAATaGAGCTGGTCAAAAATAAAG +
Preference number: 2 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLSKADK*SWSKIK
Trigger: CTTTATTTTTGACCAGCTTCATTTGTCAGCTTTGCT...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
3UTR CAA 90 bp GAAATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTaGCGGGGGTTAATAGTCCTGAGGAAGATTTTAGTTACAATGTAT +
Preference number: 2 (lower is better)
Translates to: EIWFHCYTRQFPIET*RGLIVLRKILVTMY
Trigger: ATACATTGTAACTAAAATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
3UTR-3UTR TCA 90 bp AGCCAAAATGTGTACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTGACTTTACTGAGGTATCCTTaGGAAGTGATCTTAAGCAGG +
Preference number: 2 (lower is better)
Translates to: SQNVYYLLRKSKHSDLVTLLRYP*EVILSR
Trigger: CCTGCTTAAGATCACTTCTCAAGGATACCTCAGTAA...AGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGTACACATTTTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR CCA 90 bp AGCCAAAATGTGTACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTGACTAAAATTATTTGCATCTaGCTGGGTGTGGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: SQNVYYLLRKSKHSDLVTKIICI*LGVVAH
Trigger: ATGAGCCACCACACCCAGCCAGATGCAAATAATTTT...AGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGTACACATTTTGGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR CCA 90 bp AGCCAAAATGTGTACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTGACTATATCTTGTGTATTGTaGGATAAAAGAGGGGCTAAA +
Preference number: 2 (lower is better)
Translates to: SQNVYYLLRKSKHSDLVTISCVL*DKRGAK
Trigger: TTTAGCCCCTCTTTTATCCCACAATACACAAGATAT...AGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGTACACATTTTGGCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR CAA 90 bp GGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACACAGTAGGGCTAAAGAAAACTTaGCAGGAGGTCTCTCCCAGT +
Preference number: 3 (lower is better)
Translates to: GEVVLPTIPKEPQESDTVGLKKT*QEVSPS
Trigger: ACTGGGAGAGACCTCCTGCAAAGTTTTCTTTAGCCC...TACTGTGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR CCA 72 bp GGGGCTAAAGAAAACTTTGCAGGAGGTCTCTCCCAGTaGCATTTAGGTAGCGCTATGTTTGAGGATCAACCA +
Preference number: 3 (lower is better)
Translates to: GAKENFAGGLSQ*HLGSAMFEDQP
Trigger: TGGTTGATCCTCAAACATAGCGCTACCTAAATGCCACTGGGAGAGACCTCCTGCAAAGTTTTCTTTAGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR CAA 90 bp CTTCTGGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACAAAACAATGTATATTGTaGTCACCCTTCCCCATGTCG +
Preference number: 3 (lower is better)
Translates to: LLVKWCYPLFQKNLRSLTKQCIL*SPFPMS
Trigger: CGACATGGGGAAGGGTGACAACAATATACATTGTTT...TGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR CAA 90 bp GGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACACAGTATACCCATTTTCATGGTaGGAACAATCCTTGATTTCT +
Preference number: 3 (lower is better)
Translates to: GEVVLPTIPKEPQESDTVYPFSW*EQSLIS
Trigger: AGAAATCAAGGATTGTTCCAACCATGAAAATGGGTA...TACTGTGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR TCA 72 bp GGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTaGCACAGTAAGGAGTCTGTATCTAATCAAACAATG +
Preference number: 3 (lower is better)
Translates to: GATHYSKRTSGV*HSKESVSNQTM
Trigger: CATTGTTTGATTAGATACAGACTCCTTACTGTGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR CAA 90 bp AGCCAGGTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGTGGTTGGAACAATCCTaGATTTCTGGGCCTAAAATA +
Preference number: 3 (lower is better)
Translates to: SQVVVISLKSTGYTTFSRWLEQS*ISGPKI
Trigger: TATTTTAGGCCCAGAAATCAAGGATTGTTCCAACCA...CCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCACCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR TCA 72 bp CAATCCCATCGATCTGATCTGAGCAAAGCTGACAAATaGAGCTGGTCAAAAATAAAGGGAGATTACTCAGGA +
Preference number: 3 (lower is better)
Translates to: QSHRSDLSKADK*SWSKIKGDYSG
Trigger: TCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
3UTR TCA 72 bp ACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTaGCTCTTAGCTTTCCATCACAGGTGGGAAGTCAGA +
Preference number: 3 (lower is better)
Translates to: TIFYVRVNIVTL*LLAFHHRWEVR
Trigger: TCTGACTTCCCACCTGTGATGGAAAGCTAAGAGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR-3UTR CAA 90 bp AATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTGGAAAAAGAAAGAAGCTGTaGCCACAACTTTGGGATATA +
Preference number: 3 (lower is better)
Translates to: NSRLDLLKAGVLPIFMVGKRKKL*PQLWDI
Trigger: TATATCCCAAAGTTGTGGCAACAGCTTCTTTCTTTT...TCCAACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553458.6
3UTR CCA 72 bp AATAATGACCTTTTATTTAACCCAGCCTATAGTTGTTaGATTGGATTAAATATCACTACCAGGGCCAGGTGC +
Preference number: 3 (lower is better)
Translates to: NNDLLFNPAYSC*IGLNITTRARC
Trigger: GCACCTGGCCCTGGTAGTGATATTTAATCCAATCCAACAACTATAGGCTGGGTTAAATAAAAGGTCATTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTTCTGCCTTGGTGGCCTaGGGGACCCGACCAATGACC +
Preference number: 4 (lower is better)
Translates to: TRQFPIETLRGLIVLRKISALVA*GTRPMT
Trigger: GGTCATTGGTCGGGTCCCTCAGGCCACCAAGGCAGA...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR TCA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTGAGGGACCCGACCAATaGCCTCATTGGTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TRQFPIETLRGLIVLRKIEGPDQ*PHWWLG
Trigger: ACCCAGCCACCAATGAGGTCATTGGTCGGGTCCCTC...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR GCA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTCCAGGAGGTGGAGGTTaGAGTGAGCCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: TRQFPIETLRGLIVLRKIPGGGG*SEPRSC
Trigger: GCACGATCTCGGCTCACTGCAACCTCCACCTCCTGG...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAGAGGGACCCGACCAATaGCCTCATTGGTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLEGPDQ*PHWWLG
Trigger: ACCCAGCCACCAATGAGGTCATTGGTCGGGTCCCTC...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR TCA 90 bp CTTCTGGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACATGGTCTCTCCCATCATaGGGGATGTCACACTACAGG +
Preference number: 4 (lower is better)
Translates to: LLVKWCYPLFQKNLRSLTWSLPS*GMSHYR
Trigger: CCTGTAGTGTGACATCCCTCATGATGGGAGAGACCA...TGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp GTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGTCTTTTCCAATAGCGCCGCCATaGCTCTCGGCCGCCCTAGCT +
Preference number: 4 (lower is better)
Translates to: VVVISLKSTGYTTFSRSFPIAPP*LSAALA
Trigger: AGCTAGGGCGGCCGAGAGCCATGGCGGCGCTATTGG...AAAAGACCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp GGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACACAGTAAGAGAAGGAAGATGCTaGATACCAGGTGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: GEVVLPTIPKEPQESDTVREGRC*IPGGTG
Trigger: TCCAGTCCCACCTGGTATTCAGCATCTTCCTTCTCT...TACTGTGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR GCA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTAGCAGCTCCAAATGCTaGCCCAACCAGCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: TRQFPIETLRGLIVLRKISSSKC*PNQLVQ
Trigger: CTGAACCAGCTGGTTGGGGCAGCATTTGGAGCTGCT...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTCTCAGGTTTTTGGCATaGTCCACCAGCTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TRQFPIETLRGLIVLRKILRFLA*STSSGS
Trigger: GCTGCCAGAGCTGGTGGAGCATGCCAAAAACCTGAG...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAACTCGCTCTTTGGCCTaGGGAGTGATCAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLTRSLA*GVIRGP
Trigger: TGGCCCTCTGATCACTCCCCAGGCCAAAGAGCGAGT...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp CTTCTGGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACACATTGGCAAAGGCACTaGAATGGGGACATTCACTCC +
Preference number: 4 (lower is better)
Translates to: LLVKWCYPLFQKNLRSLTHWQRH*NGDIHS
Trigger: GGAGTGAATGTCCCCATTCCAGTGCCTTTGCCAATG...TGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp TTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAATCTGCCTTGGTGGCCTaGGGGACCCGACCAATGACC +
Preference number: 4 (lower is better)
Translates to: FSYNVFQSHRSDLSKADKSALVA*GTRPMT
Trigger: GGTCATTGGTCGGGTCCCTCAGGCCACCAAGGCAGA...TTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR TCA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTAGATCAGCTCCAGGCTaGTCTCCTGCATTGACTCTC +
Preference number: 4 (lower is better)
Translates to: TRQFPIETLRGLIVLRKIRSAPG*SPALTL
Trigger: GAGAGTCAATGCAGGAGATCAGCCTGGAGCTGATCT...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAAATTGGTGTCTCCCCTaGAGGAGGATCGAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLINWCLP*RRIESR
Trigger: CCGGCTCTCGATCCTCCTTCAGGGGAGACACCAATT...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTCCAATAGCGCCGCCATaGCTCTCGGCCGCCCTAGCT +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVPIAPP*LSAALA
Trigger: AGCTAGGGCGGCCGAGAGCCATGGCGGCGCTATTGG...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp GGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACACAGTAGACTGGATTTCACCTTaGAAGAAACCTGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: GEVVLPTIPKEPQESDTVDWISP*KKPAGS
Trigger: GGATCCTGCAGGTTTCTTCCAAGGTGAAATCCAGTC...TACTGTGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTACTGGCAGCCACTTCTTaGCTTCTCCCACAAGGACTG +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLLAATS*LLPQGL
Trigger: CAGTCCTTGTGGGAGAAGCCAAGAAGTGGCTGCCAG...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp AGTAATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTAAGCATAGAGGCGGCTaGGGGTGGTGGCTCACACCT +
Preference number: 4 (lower is better)
Translates to: SNSRLDLLKAGVLPIFMVKHRGG*GWWLTP
Trigger: AGGTGTGAGCCACCACCCCCAGCCGCCTCTATGCTT...AACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTATGGTCTCTCCCATCATaGGGGATGTCACACTACAGG +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLWSLPS*GMSHYR
Trigger: CCTGTAGTGTGACATCCCTCATGATGGGAGAGACCA...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR TCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATACACAAGGACTGCTGTTaGAAGAGCCATGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLIHKDCC*KSHAAL
Trigger: CAGCGCTGCATGGCTCTTTCAACAGCAGTCCTTGTG...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTACTTTGGCCTGGGGAGTaGTCAGAGGGCCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLLWPGE*SEGQDQ
Trigger: CTGATCTTGGCCCTCTGATCACTCCCCAGGCCAAAG...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTATCGAGAGCCGGTGAATaGGAACATTGGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLSRAGE*EHWQRH
Trigger: GTGCCTTTGCCAATGTTCTCATTCACCGGCTCTCGA...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTAGGATCGAGAGCCGGTaGATGAGAACATTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TRQFPIETLRGLIVLRKIRIESR*MRTLAK
Trigger: CTTTGCCAATGTTCTCATTCACCGGCTCTCGATCCT...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp AGCCAGGTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGAGGATCGAGAGCCGGTaGATGAGAACATTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: SQVVVISLKSTGYTTFSRRIESR*MRTLAK
Trigger: CTTTGCCAATGTTCTCATTCACCGGCTCTCGATCCT...CCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCACCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAATTGGTGTCTCCCCTaGAGGAGGATCGAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLNWCLP*RRIESR
Trigger: CCGGCTCTCGATCCTCCTTCAGGGGAGACACCAATT...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAGGCTGCATCCATTTCTaGCTTGGTGGCCTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLGCIHF*LGGLRD
Trigger: GTCCCTCAGGCCACCAAGGCAGAAATGGATGCAGCC...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR GCA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTGCAGGAAGCAATGGCTaGATCCATTTCTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: TRQFPIETLRGLIVLRKIAGSNG*IHFCLG
Trigger: ACCAAGGCAGAAATGGATGCAGCCATTGCTTCCTGC...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR GCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCCCGAGATCGTGCCACTaGACTCCACCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIPRSCH*TPPWAT
Trigger: TGTTGCCCAGGGTGGAGTGCAGTGGCACGATCTCGG...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATACTGGCAGCCACTTCTTaGCTTCTCCCACAAGGACTG +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLILAATS*LLPQGL
Trigger: CAGTCCTTGTGGGAGAAGCCAAGAAGTGGCTGCCAG...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAATGCTCCACCAGCTCTaGCAGCCACTTCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLIMLHQL*QPLLGF
Trigger: GAAGCCAAGAAGTGGCTGCCAGAGCTGGTGGAGCAT...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAAGAGAAGGAAGATGCTaGATACCAGGTGGGACTGGA +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLREGRC*IPGGTG
Trigger: TCCAGTCCCACCTGGTATTCAGCATCTTCCTTCTCT...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR TCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCAGAGCCATGCAGCGCTaGCCAGCAGCTCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIRAMQR*PAAPNA
Trigger: AGCATTTGGAGCTGCTGGTCAGCGCTGCATGGCTCT...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTTGGCCTGGGGAGTaGTCAGAGGGCCAAGATCAG +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKLWPGE*SEGQDQ
Trigger: CTGATCTTGGCCCTCTGATCACTCCCCAGGCCAAAG...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTATGGCTCCATTGGTGGTaGAGATGGCAGTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLWLHWW*RWQFHF
Trigger: GAAATGGAACTGCCATCTTCACCACCAATGGAGCCA...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTATGTGGCCTCCCAAAATaGTGGAATTACAGGCGTGAG +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLCGLPK*WNYRRE
Trigger: CTCACGCCTGTAATTCCATCATTTTGGGAGGCCACA...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGGCAGGAGAATTACTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLIGRRIT*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGTAATTCTCCTGCC...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp GGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACACAGTAAACATAGTGACCTTGTaGCTCTTAGCTTTCCATCAC +
Preference number: 4 (lower is better)
Translates to: GEVVLPTIPKEPQESDTVNIVTL*LLAFHH
Trigger: GTGATGGAAAGCTAAGAGTCACAAGGTCACTATGTT...TACTGTGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR GCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTACTCAGGTTTTTGGCATaGTCCACCAGCTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLLRFLA*STSSGS
Trigger: GCTGCCAGAGCTGGTGGAGCATGCCAAAAACCTGAG...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp TTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAACATCCATTTCTGCCTTaGTGGCCTGAGGGACCCGAC +
Preference number: 4 (lower is better)
Translates to: FSYNVFQSHRSDLSKADKHPFLP*WPEGPD
Trigger: GTCGGGTCCCTCAGGCCACCAAGGCAGAAATGGATG...TTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACATCCATTTCTGCCTTaGTGGCCTGAGGGACCCGAC +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKHPFLP*WPEGPD
Trigger: GTCGGGTCCCTCAGGCCACCAAGGCAGAAATGGATG...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp GGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACACAGTATATTTCCACACACCATaGCCATGGGAAACATCCAAA +
Preference number: 4 (lower is better)
Translates to: GEVVLPTIPKEPQESDTVYFHTP*PWETSK
Trigger: TTTGGATGTTTCCCATGGCCATGGTGTGTGGAAATA...TACTGTGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAGGCATGACTACCCCATaGTTCTTGGCTCCCATATTG +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLGMTTP*FLAPIL
Trigger: CAATATGGGAGCCAAGAACCATGGGGTAGTCATGCC...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAGCTGCCCCAACCAGCTaGTTCAGGGTATTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLAAPTS*FRVFSL
Trigger: TAAGGAAAATACCCTGAACCAGCTGGTTGGGGCAGC...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
3UTR CAA 72 bp ACAACCAGAGTTCTAGGCCTCCAGTTCCAGACTATGTaGTTTCTGACAGTGGGGAAACAAAGGAATTTGGGT +
Preference number: 4 (lower is better)
Translates to: TTRVLGLQFQTM*FLTVGKQRNLG
Trigger: ACCCAAATTCCTTTGTTTCCCCACTGTCAGAAACAACATAGTCTGGAACTGGAGGCCTAGAACTCTGGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGCTCCCATATTGGCTTaGACCCTCTTGCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLIAPILA*TLLPCL
Trigger: AAGACATGGCAAGAGGGTTCAAGCCAATATGGGAGC...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGAGAGCCATGCAGCGCTaGCCAGCAGCTCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLRAMQR*PAAPNA
Trigger: AGCATTTGGAGCTGCTGGTCAGCGCTGCATGGCTCT...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACACAAGGACTGCTGTTaGAAGAGCCATGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKHKDCC*KSHAAL
Trigger: CAGCGCTGCATGGCTCTTTCAACAGCAGTCCTTGTG...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATATGGCTCCATTGGTGGTaGAGATGGCAGTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLIWLHWW*RWQFHF
Trigger: GAAATGGAACTGCCATCTTCACCACCAATGGAGCCA...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTATCGAGAGCCGGTGAATaGGAACATTGGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLSRAGE*EHWQRH
Trigger: GTGCCTTTGCCAATGTTCTCATTCACCGGCTCTCGA...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTACATGACAACAGCAGGTaGGGAAAGAGTAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLHDNSR*GKSSIF
Trigger: GAAGATGCTACTCTTTCCTCACCTGCTGTTGTCATG...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGGAGGTTGCGGTGAGCTaGGATCACGCCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLEVAVS*DHAIAL
Trigger: GAGTGCAATGGCGTGATCTCAGCTCACCGCAACCTC...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR GCA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGAATGGAGCAATGCCTaGACACACTCCCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKEWSNA*THSQRQ
Trigger: CTGCCTCTGGGAGTGTGTGCAGGCATTGCTCCATTC...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR GCA 90 bp TTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAAGAATGGAGCAATGCCTaGACACACTCCCAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FSYNVFQSHRSDLSKADKEWSNA*THSQRQ
Trigger: CTGCCTCTGGGAGTGTGTGCAGGCATTGCTCCATTC...TTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR GCA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTTCCCACAAAGCTGATTaGTTTGATGTCCGGATGATC +
Preference number: 4 (lower is better)
Translates to: TRQFPIETLRGLIVLRKISHKAD*FDVRMI
Trigger: GATCATCCGGACATCAAAGCAATCAGCTTTGTGGGA...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCAGCAGCTCCAAATGCTaGCCCAACCAGCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLISSSKC*PNQLVQ
Trigger: CTGAACCAGCTGGTTGGGGCAGCATTTGGAGCTGCT...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAAACCAGCAGCTCCAAATaGTGCCCCAACCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKTSSSK*CPNQLV
Trigger: AACCAGCTGGTTGGGGCAGCATTTGGAGCTGCTGGT...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAACTGTTGAAAGAGCCATaGAGCGCTGACCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKLLKEP*SADQQL
Trigger: GAGCTGCTGGTCAGCGCTGCATGGCTCTTTCAACAG...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCCTGTTGAAAGAGCCATaGAGCGCTGACCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLILLKEP*SADQQL
Trigger: GAGCTGCTGGTCAGCGCTGCATGGCTCTTTCAACAG...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp TTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAACTGTTGAAAGAGCCATaGAGCGCTGACCAGCAGCTC +
Preference number: 4 (lower is better)
Translates to: FSYNVFQSHRSDLSKADKLLKEP*SADQQL
Trigger: GAGCTGCTGGTCAGCGCTGCATGGCTCTTTCAACAG...TTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTTTGGTGGCTGGGTTGTaGATATCGATCCATTTGTCA +
Preference number: 4 (lower is better)
Translates to: TRQFPIETLRGLIVLRKILVAGL*ISIHLS
Trigger: TGACAAATGGATCGATATCCACAACCCAGCCACCAA...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAGTTTGCAGGAAGCAATaGCTGCATCCATTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLVCRKQ*LHPFLP
Trigger: AGGCAGAAATGGATGCAGCCATTGCTTCCTGCAAAC...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTACACACACCATGGCCATaGGAAACATCCAAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLHTPWP*ETSKGG
Trigger: TCCCCCTTTGGATGTTTCCCATGGCCATGGTGTGTG...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGCTGCCCCAACCAGCTaGTTCAGGGTATTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLIAAPTS*FRVFSL
Trigger: TAAGGAAAATACCCTGAACCAGCTGGTTGGGGCAGC...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCATGCTCCACCAGCTCTaGCAGCCACTTCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIMLHQL*QPLLGF
Trigger: GAAGCCAAGAAGTGGCTGCCAGAGCTGGTGGAGCAT...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAAATGCTCCACCAGCTCTaGCAGCCACTTCTTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKMLHQL*QPLLGF
Trigger: GAAGCCAAGAAGTGGCTGCCAGAGCTGGTGGAGCAT...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTACTCGCTCTTTGGCCTaGGGAGTGATCAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVTRSLA*GVIRGP
Trigger: TGGCCCTCTGATCACTCCCCAGGCCAAAGAGCGAGT...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGACTCGCTCTTTGGCCTaGGGAGTGATCAGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLTRSLA*GVIRGP
Trigger: TGGCCCTCTGATCACTCCCCAGGCCAAAGAGCGAGT...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAGTCCATCAAGAAGGATaGAAGCTCCCTCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLVHQEG*KLPPLF
Trigger: GAACAAAGGAGGGAGCTTCCATCCTTCTTGATGGAC...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAGCAAAGGCACTGGAATaGGGACATTCACTCCCACCT +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLAKALE*GHSLPP
Trigger: AGGTGGGAGTGAATGTCCCCATTCCAGTGCCTTTGC...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp AGTAATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTCGGAGCAAGACCTGCTaGCGGCTTAATACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: SNSRLDLLKAGVLPIFMVRSKTC*RLNTEV
Trigger: CACTTCAGTATTAAGCCGCCAGCAGGTCTTGCTCCG...AACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp GTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGTCTTTTGGAGGTCTCTCCCAGTaGCATTTAGGTAGCGCTATG +
Preference number: 4 (lower is better)
Translates to: VVVISLKSTGYTTFSRSFGGLSQ*HLGSAM
Trigger: CATAGCGCTACCTAAATGCCACTGGGAGAGACCTCC...AAAAGACCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTACGAATTTCCCACCAATaGAGAGCTTTACAGTTGGCA +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLRISHQ*RALQLA
Trigger: TGCCAACTGTAAAGCTCTTCATTGGTGGGAAATTCG...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR TCA 90 bp AATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTGGATCATGGCAGGAAAATTaGATGGAGCAATGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: NSRLDLLKAGVLPIFMVGSWQEN*MEQCLH
Trigger: GTGCAGGCATTGCTCCATTCAATTTTCCTGCCATGA...TCCAACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTACCTCTTGCCATGTCTTaGTCCTCTCTCGAAGATATA +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLPLAMS*SSLEDI
Trigger: TATATCTTCGAGAGAGGATCAAGACATGGCAAGAGG...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCAGATCAGCTCCAGGCTaGTCTCCTGCATTGACTCTC +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIRSAPG*SPALTL
Trigger: GAGAGTCAATGCAGGAGATCAGCCTGGAGCTGATCT...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTATGGCTCCATTGGTGGTaGAGATGGCAGTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLWLHWW*RWQFHF
Trigger: GAAATGGAACTGCCATCTTCACCACCAATGGAGCCA...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAATCGAGAGCCGGTGAATaGGAACATTGGCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKSRAGE*EHWQRH
Trigger: GTGCCTTTGCCAATGTTCTCATTCACCGGCTCTCGA...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAGGATCGAGAGCCGGTaGATGAGAACATTGGCAAAG +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLRIESR*MRTLAK
Trigger: CTTTGCCAATGTTCTCATTCACCGGCTCTCGATCCT...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAGCAAGAAGCATAGTTaGTCCAGGGACTCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLSKKHS*SRDSLR
Trigger: TCTGAGCGAGTCCCTGGAGCAACTATGCTTCTTGCT...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR GCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTATCCCACAAAGCTGATTaGTTTGATGTCCGGATGATC +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLSHKAD*FDVRMI
Trigger: GATCATCCGGACATCAAAGCAATCAGCTTTGTGGGA...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTAGCAGCTCCAAATGCTaGCCCAACCAGCTGGTTCAG +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVSSSKC*PNQLVQ
Trigger: CTGAACCAGCTGGTTGGGGCAGCATTTGGAGCTGCT...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTACCAGCAGCTCCAAATaGTGCCCCAACCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVTSSSK*CPNQLV
Trigger: AACCAGCTGGTTGGGGCAGCATTTGGAGCTGCTGGT...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp AGCCAAAATGTGTACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTGACTACCAGCAGCTCCAAATaGTGCCCCAACCAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: SQNVYYLLRKSKHSDLVTTSSSK*CPNQLV
Trigger: AACCAGCTGGTTGGGGCAGCATTTGGAGCTGCTGGT...AGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGTACACATTTTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR GCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTCTCAGGTTTTTGGCATaGTCCACCAGCTCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVLRFLA*STSSGS
Trigger: GCTGCCAGAGCTGGTGGAGCATGCCAAAAACCTGAG...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGTGGGCTCAAGCAATCTaGCCACTGTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLWAQAI*PLWPPK
Trigger: TTTGGGAGGCCACAGTGGGCAGATTGCTTGAGCCCA...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR GCA 90 bp TTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAAGTTCAAGCAATTCTCTaGCTCAGCCTCCCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FSYNVFQSHRSDLSKADKVQAIL*LSLPSS
Trigger: GCTGCTTGGGAGGCTGAGGCAGAGAATTGCTTGAAC...TTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555126.1
CDS-3UTR CCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAGACCTCATTGGTGGCTaGGTTGTGGATATCGATCCA +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLDLIGG*VVDIDP
Trigger: TGGATCGATATCCACAACCCAGCCACCAATGAGGTC...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGGCAGGAAAATTGAATaGAGCAATGCCTGCACACAC +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLIGRKIE*SNACTH
Trigger: GTGTGTGCAGGCATTGCTCCATTCAATTTTCCTGCC...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGGGGCACCAGAATCCTaGAGCAACTTAGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKGAPES*SNLARS
Trigger: GCTTCTTGCTAAGTTGCTCCAGGATTCTGGTGCCCC...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp AATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTGGATCTTGGCTCCCATATTaGCTTGAACCCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: NSRLDLLKAGVLPIFMVGSWLPY*LEPSCH
Trigger: ATGGCAAGAGGGTTCAAGCCAATATGGGAGCCAAGA...TCCAACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATATCTTGGCTCCCATATTaGCTTGAACCCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLISWLPY*LEPSCH
Trigger: ATGGCAAGAGGGTTCAAGCCAATATGGGAGCCAAGA...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp AATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTGGACTACCCCATGGTTCTTaGCTCCCATATTGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: NSRLDLLKAGVLPIFMVGLPHGS*LPYWLE
Trigger: TTCAAGCCAATATGGGAGCCAAGAACCATGGGGTAG...TCCAACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAGGCATGACTACCCCATaGTTCTTGGCTCCCATATTG +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLGMTTP*FLAPIL
Trigger: CAATATGGGAGCCAAGAACCATGGGGTAGTCATGCC...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTCTGGCAGCCACTTCTTaGCTTCTCCCACAAGGACTG +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVLAATS*LLPQGL
Trigger: CAGTCCTTGTGGGAGAAGCCAAGAAGTGGCTGCCAG...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCGCAAAGGCACTGGAATaGGGACATTCACTCCCACCT +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIAKALE*GHSLPP
Trigger: AGGTGGGAGTGAATGTCCCCATTCCAGTGCCTTTGC...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTACATTGGCAAAGGCACTaGAATGGGGACATTCACTCC +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLHWQRH*NGDIHS
Trigger: GGAGTGAATGTCCCCATTCCAGTGCCTTTGCCAATG...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAGCCACCGCGCCTGGCTaGAACATTTTCTTTACATAC +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLATAPG*NIFFTY
Trigger: GTATGTAAAGAAAATGTTCCAGCCAGGCGCGGTGGC...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGTGAGCCACCGCGCCTaGCTGGAACATTTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKVSHRA*LEHFLY
Trigger: GTAAAGAAAATGTTCCAGCCAGGCGCGGTGGCTCAC...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAGCAATCTGCCCACTGTaGCCTCCCAAAATGATGGAA +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLAICPL*PPKMME
Trigger: TTCCATCATTTTGGGAGGCCACAGTGGGCAGATTGC...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATACTTTACAGTTGGCACTaGAGAAGAGAAGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLILYSWH*RREGRC
Trigger: GCATCTTCCTTCTCTTCTTCAGTGCCAACTGTAAAG...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR TCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTGGTCCATGTCTTTGGTaGTGGATGGCATGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVGPCLW*WMAWSL
Trigger: GAGAGACCATGCCATCCATCACCAAAGACATGGACC...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR TCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTATCATGGCAGGAAAATTaGATGGAGCAATGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLSWQEN*MEQCLH
Trigger: GTGCAGGCATTGCTCCATTCAATTTTCCTGCCATGA...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR TCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATACCTCTTGCCATGTCTTaGTCCTCTCTCGAAGATATA +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLIPLAMS*SSLEDI
Trigger: TATATCTTCGAGAGAGGATCAAGACATGGCAAGAGG...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp TTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAAGCTCCCATATTGGCTTaGACCCTCTTGCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: FSYNVFQSHRSDLSKADKAPILA*TLLPCL
Trigger: AAGACATGGCAAGAGGGTTCAAGCCAATATGGGAGC...TTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAATATTGGCATCTGGCATaGCTACCCCATGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKYWHLA*LPHGSW
Trigger: CCAAGAACCATGGGGTAGTCATGCCAGATGCCAATA...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTAGATCAGCTCCAGGCTaGTCTCCTGCATTGACTCTC +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVRSAPG*SPALTL
Trigger: GAGAGTCAATGCAGGAGATCAGCCTGGAGCTGATCT...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCGCAGGAAGCAATGGCTaGATCCATTTCTGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIAGSNG*IHFCLG
Trigger: ACCAAGGCAGAAATGGATGCAGCCATTGCTTCCTGC...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR GCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAAAGCAAGAAGCATAGTTaGTCCAGGGACTCGCTCAGA +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKSKKHS*SRDSLR
Trigger: TCTGAGCGAGTCCCTGGAGCAACTATGCTTCTTGCT...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR GCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATATCCCACAAAGCTGATTaGTTTGATGTCCGGATGATC +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLISHKAD*FDVRMI
Trigger: GATCATCCGGACATCAAAGCAATCAGCTTTGTGGGA...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTATGGCTTGAACCCTCTTaGCATGTCTTGATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLWLEPS*HVLILS
Trigger: AGAGAGGATCAAGACATGGCAAGAGGGTTCAAGCCA...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp AATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTGGATTGGTGGCTGGGTTGTaGATATCGATCCATTTGTCA +
Preference number: 4 (lower is better)
Translates to: NSRLDLLKAGVLPIFMVGLVAGL*ISIHLS
Trigger: TGACAAATGGATCGATATCCACAACCCAGCCACCAA...TCCAACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTCACACACCATGGCCATaGGAAACATCCAAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVHTPWP*ETSKGG
Trigger: TCCCCCTTTGGATGTTTCCCATGGCCATGGTGTGTG...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTGGGGCACCAGAATCCTaGAGCAACTTAGCAAGAAGC +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVGAPES*SNLARS
Trigger: GCTTCTTGCTAAGTTGCTCCAGGATTCTGGTGCCCC...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCGGCATGACTACCCCATaGTTCTTGGCTCCCATATTG +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIGMTTP*FLAPIL
Trigger: CAATATGGGAGCCAAGAACCATGGGGTAGTCATGCC...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp AGTAATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTGTCCATCAAGAAGGATaGAAGCTCCCTCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: SNSRLDLLKAGVLPIFMVVHQEG*KLPPLF
Trigger: GAACAAAGGAGGGAGCTTCCATCCTTCTTGATGGAC...AACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTGCAAAGGCACTGGAATaGGGACATTCACTCCCACCT +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVAKALE*GHSLPP
Trigger: AGGTGGGAGTGAATGTCCCCATTCCAGTGCCTTTGC...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp GGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACACAGTAATATCTTGTGTATTGTaGGATAAAAGAGGGGCTAAA +
Preference number: 4 (lower is better)
Translates to: GEVVLPTIPKEPQESDTVISCVL*DKRGAK
Trigger: TTTAGCCCCTCTTTTATCCCACAATACACAAGATAT...TACTGTGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTGCTTTGATGTCCGGATaGTCGCAAATAAAATTTACA +
Preference number: 4 (lower is better)
Translates to: TRQFPIETLRGLIVLRKIALMSG*SQIKFT
Trigger: TGTAAATTTTATTTGCGATCATCCGGACATCAAAGC...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp GTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGTCTTTTCCTCTTGCCATGTCTTaGTCCTCTCTCGAAGATATA +
Preference number: 4 (lower is better)
Translates to: VVVISLKSTGYTTFSRSFPLAMS*SSLEDI
Trigger: TATATCTTCGAGAGAGGATCAAGACATGGCAAGAGG...AAAAGACCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTGCTCCCATATTGGCTTaGACCCTCTTGCCATGTCTT +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVAPILA*TLLPCL
Trigger: AAGACATGGCAAGAGGGTTCAAGCCAATATGGGAGC...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGTATTGGCATCTGGCATaGCTACCCCATGGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLYWHLA*LPHGSW
Trigger: CCAAGAACCATGGGGTAGTCATGCCAGATGCCAATA...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGATCTCCTGCATTaGCTCTCAGGTTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKADLLH*LSGFWH
Trigger: ATGCCAAAAACCTGAGAGTCAATGCAGGAGATCAGC...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCCATGACAACAGCAGGTaGGGAAAGAGTAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIHDNSR*GKSSIF
Trigger: GAAGATGCTACTCTTTCCTCACCTGCTGTTGTCATG...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp TTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAAATCAGACTCTTCTGGTaGAGTGGTGCTACCCACTAT +
Preference number: 4 (lower is better)
Translates to: FSYNVFQSHRSDLSKADKIRLFW*SGATHY
Trigger: ATAGTGGGTAGCACCACTTCACCAGAAGAGTCTGAT...TTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR GCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGGCTTGAACCCTCTTaGCATGTCTTGATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIWLEPS*HVLILS
Trigger: AGAGAGGATCAAGACATGGCAAGAGGGTTCAAGCCA...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAATGGCTTGAACCCTCTTaGCATGTCTTGATCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKWLEPS*HVLILS
Trigger: AGAGAGGATCAAGACATGGCAAGAGGGTTCAAGCCA...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAAGACTGGATTTCACCTTaGAAGAAACCTGCAGGATCC +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKDWISP*KKPAGS
Trigger: GGATCCTGCAGGTTTCTTCCAAGGTGAAATCCAGTC...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCATGCTGAATACCAGGTaGGACTGGATTTCACCTTGG +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIMLNTR*DWISPW
Trigger: CCAAGGTGAAATCCAGTCCCACCTGGTATTCAGCAT...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTGACCTCATTGGTGGCTaGGTTGTGGATATCGATCCA +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVDLIGG*VVDIDP
Trigger: TGGATCGATATCCACAACCCAGCCACCAATGAGGTC...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGTTTGCAGGAAGCAATaGCTGCATCCATTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKVCRKQ*LHPFLP
Trigger: AGGCAGAAATGGATGCAGCCATTGCTTCCTGCAAAC...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTCTTGGCTCCCATATTaGCTTGAACCCTCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLISWLPY*LEPSCH
Trigger: ATGGCAAGAGGGTTCAAGCCAATATGGGAGCCAAGA...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAACTACCCCATGGTTCTTaGCTCCCATATTGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKLPHGS*LPYWLE
Trigger: TTCAAGCCAATATGGGAGCCAAGAACCATGGGGTAG...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCCTACCCCATGGTTCTTaGCTCCCATATTGGCTTGAA +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLILPHGS*LPYWLE
Trigger: TTCAAGCCAATATGGGAGCCAAGAACCATGGGGTAG...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGGCTGCCCCAACCAGCTaGTTCAGGGTATTTTCCTTA +
Preference number: 4 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLAAPTS*FRVFSL
Trigger: TAAGGAAAATACCCTGAACCAGCTGGTTGGGGCAGC...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTGTAACAGGTCATATTTaGCTTGACATTCGAGATGAT +
Preference number: 4 (lower is better)
Translates to: TRQFPIETLRGLIVLRKIVTGHI*LDIRDD
Trigger: ATCATCTCGAATGTCAAGCCAAATATGACCTGTTAC...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTCATTGGCAAAGGCACTaGAATGGGGACATTCACTCC +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVHWQRH*NGDIHS
Trigger: GGAGTGAATGTCCCCATTCCAGTGCCTTTGCCAATG...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAAAAAATTATCCGGGTGTaGGGGCATGCACCTGTAATC +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKKIIRV*GHAPVI
Trigger: GATTACAGGTGCATGCCCCCACACCCGGATAATTTT...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAACTTTACAGTTGGCACTaGAGAAGAGAAGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKLYSWH*RREGRC
Trigger: GCATCTTCCTTCTCTTCTTCAGTGCCAACTGTAAAG...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR TCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAGCTTTGATGTCCGGATaGTCGCAAATAAAATTTACA +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLALMSG*SQIKFT
Trigger: TGTAAATTTTATTTGCGATCATCCGGACATCAAAGC...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTGCTGATCTCCTGCATTaGCTCTCAGGTTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVADLLH*LSGFWH
Trigger: ATGCCAAAAACCTGAGAGTCAATGCAGGAGATCAGC...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp AGCCAAAATGTGTACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTGACTGCTGATCTCCTGCATTaGCTCTCAGGTTTTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SQNVYYLLRKSKHSDLVTADLLH*LSGFWH
Trigger: ATGCCAAAAACCTGAGAGTCAATGCAGGAGATCAGC...AGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGTACACATTTTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp AGCCAAAATGTGTACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTGACTCATGACAACAGCAGGTaGGGAAAGAGTAGCATCTTC +
Preference number: 4 (lower is better)
Translates to: SQNVYYLLRKSKHSDLVTHDNSR*GKSSIF
Trigger: GAAGATGCTACTCTTTCCTCACCTGCTGTTGTCATG...AGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGTACACATTTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACCCATCGATCTGATCTaGGCAAAGCTGACAAATGAA +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKPIDLI*AKLTNE
Trigger: TTCATTTGTCAGCTTTGCTCAGATCAGATCGATGGG...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAACCCATCGATCTGATCTaGGCAAAGCTGACAAATGAA +
Preference number: 4 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKPIDLI*AKLTNE
Trigger: TTCATTTGTCAGCTTTGCTCAGATCAGATCGATGGG...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGAGAACCTCAGGAGTCTaGCACAGTAAGGAGTCTGTA +
Preference number: 4 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLRTSGV*HSKESV
Trigger: TACAGACTCCTTACTGTGTCAGACTCCTGAGGTTCT...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR GCA 90 bp AGCCAGGTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGAAATTTACAGCTTCATaGTGTCCATGGATGATGTTT +
Preference number: 4 (lower is better)
Translates to: SQVVVISLKSTGYTTFSRKFTAS*CPWMMF
Trigger: AAACATCATCCATGGACAGCATGAAGCTGTAAATTT...CCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCACCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR GCA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAGAAGATATACTCTCCTaGCTTGTTGGATCCCACAAA +
Preference number: 4 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLEDILS*LVGSHK
Trigger: TTTGTGGGATCCAACAAGGCAGGAGAGTATATCTTC...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTCAATTGGATTGGTACTaGAAAAAGAATCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: TRQFPIETLRGLIVLRKIQLDWY*KKNPFC
Trigger: ACAGAATGGATTCTTTTTGCAGTACCAATCCAATTG...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGCTTCATGCTGTCCATaGATGATGTTTAATGTTCCA +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLIASCCP*MMFNVP
Trigger: TGGAACATTAAACATCATCCATGGACAGCATGAAGC...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp TTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAATTCCTTATTGGCATCTaGCATGACTACCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: FSYNVFQSHRSDLSKADKFLIGI*HDYPMV
Trigger: AACCATGGGGTAGTCATGCCAGATGCCAATAAGGAA...TTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAATTCCTTATTGGCATCTaGCATGACTACCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKFLIGI*HDYPMV
Trigger: AACCATGGGGTAGTCATGCCAGATGCCAATAAGGAA...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTTCCTTATTGGCATCTaGCATGACTACCCCATGGTT +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIFLIGI*HDYPMV
Trigger: AACCATGGGGTAGTCATGCCAGATGCCAATAAGGAA...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGGTCCATCAAGAAGGATaGAAGCTCCCTCCTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLVHQEG*KLPPLF
Trigger: GAACAAAGGAGGGAGCTTCCATCCTTCTTGATGGAC...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp AGCCAGGTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGTCTTACCCATTTTCATaGTTGGAACAATCCTTGATT +
Preference number: 4 (lower is better)
Translates to: SQVVVISLKSTGYTTFSRSYPFS*LEQSLI
Trigger: AATCAAGGATTGTTCCAACCATGAAAATGGGTAAGA...CCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCACCTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCACTCTTCTGGTGAAGTaGTGCTACCCACTATTCCAA +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLITLLVK*CYPLFQ
Trigger: TTGGAATAGTGGGTAGCACCACTTCACCAGAAGAGT...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTATCACAAAGGAGCAAATaGATTCTCAACATGGCAAAT +
Preference number: 4 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLSQRSK*ILNMAN
Trigger: ATTTGCCATGTTGAGAATCCATTTGCTCCTTTGTGA...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000555126.1
3UTR CAA 72 bp AAACATGAGCCCAACACGATGGTTCTTGTGGGCATCTaGAATGTGCTAATTGAAAGTAATATGACAAGTCTG +
Preference number: 4 (lower is better)
Translates to: KHEPNTMVLVGI*NVLIESNMTSL
Trigger: CAGACTTGTCATATTACTTTCAATTAGCACATTCAAGATGCCCACAAGAACCATCGTGTTGGGCTCATGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAAGCAAAGCTGACAAATaGAGCTGGTCAAAAATAAAG +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLISKADK*SWSKIK
Trigger: CTTTATTTTTGACCAGCTTCATTTGTCAGCTTTGCT...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAATTACTGAGGTATCCTTaGGAAGTGATCTTAAGCAGG +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKLLRYP*EVILSR
Trigger: CCTGCTTAAGATCACTTCTCAAGGATACCTCAGTAA...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp TTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAAAAGCGTAAAGGCAGTTaGACTAATGGCAGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: FSYNVFQSHRSDLSKADKKRKGS*TNGRRR
Trigger: TCTTCTTCTGCCATTAGTTCAACTGCCTTTACGCTT...TTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGTTAGCACTATCAAAGTaGCTGGTAAGGACGCAGGAA +
Preference number: 4 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLLALSK*LVRTQE
Trigger: TTCCTGCGTCCTTACCAGTCACTTTGATAGTGCTAA...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAAAGACTATGTTGTTTCTaGCAGTGGGGAAACAAAGGA +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKRLCCF*QWGNKG
Trigger: TCCTTTGTTTCCCCACTGTCAGAAACAACATAGTCT...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR GCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAAGAAGATATACTCTCCTaGCTTGTTGGATCCCACAAA +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKEDILS*LVGSHK
Trigger: TTTGTGGGATCCAACAAGGCAGGAGAGTATATCTTC...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATATTGGTCCAACAAAGTTaGCATTTTCATAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLILVQQS*HFHSLS
Trigger: TGAAAGGCTATGAAAATGGCAACTTTGTTGGACCAA...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR GCA 90 bp AGCCAAAATGTGTACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTGACTCTTCTGGTGAAGTGGTaGTACCCACTATTCCAAAAG +
Preference number: 4 (lower is better)
Translates to: SQNVYYLLRKSKHSDLVTLLVKW*YPLFQK
Trigger: CTTTTGGAATAGTGGGTAGCACCACTTCACCAGAAG...AGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGTACACATTTTGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATATCCATTTGTCACTTTTaGATTCAACGAATTTCCCAC +
Preference number: 4 (lower is better)
Translates to: WFHCYTRQFPIETLRGLISICHF*IQRISH
Trigger: GTGGGAAATTCGTTGAATCCAAAAGTGACAAATGGA...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCAATTTCTTTCTGCTaGCGGCTTAATACTGAAGTG +
Preference number: 4 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKAISFC*RLNTEV
Trigger: CACTTCAGTATTAAGCCGCCAGCAGAAAGAAATTGC...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350259.8
CDS-3UTR CCA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAATATTTCCACACACCATaGCCATGGGAAACATCCAAA +
Preference number: 4 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKYFHTP*PWETSK
Trigger: TTTGGATGTTTCCCATGGCCATGGTGTGTGGAAATA...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp TTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAAAAAATTATTTGCATCTaGCTGGGTGTGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: FSYNVFQSHRSDLSKADKKIICI*LGVVAH
Trigger: ATGAGCCACCACACCCAGCCAGATGCAAATAATTTT...TTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAA
39% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR TCA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGCATGCTGTCCATGGATaGTGTTTAATGTTCCATCAG +
Preference number: 4 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLHAVHG*CLMFHQ
Trigger: CTGATGGAACATTAAACATCATCCATGGACAGCATG...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR TCA 90 bp AGTAATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTGCTTTGATGTCCGGATaGTCGCAAATAAAATTTACA +
Preference number: 4 (lower is better)
Translates to: SNSRLDLLKAGVLPIFMVALMSG*SQIKFT
Trigger: TGTAAATTTTATTTGCGATCATCCGGACATCAAAGC...AACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATTACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR GCA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGGAAGATATACTCTCCTaGCTTGTTGGATCCCACAAA +
Preference number: 4 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLEDILS*LVGSHK
Trigger: TTTGTGGGATCCAACAAGGCAGGAGAGTATATCTTC...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTAATACCAGGTGGGACTaGATTTCACCTTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVNTRWD*ISPWKK
Trigger: TTTCTTCCAAGGTGAAATCCAGTCCCACCTGGTATT...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGAATGGATTCTCAACATaGCAAATTTCCCCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLNGFST*QISPFP
Trigger: GGGGAAAGGGGAAATTTGCCATGTTGAGAATCCATT...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555126.1
CDS-3UTR TCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCAGCAAAGCTGACAAATaGAGCTGGTCAAAAATAAAG +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLISKADK*SWSKIK
Trigger: CTTTATTTTTGACCAGCTTCATTTGTCAGCTTTGCT...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR TCA 90 bp TTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAATCCAGTCACCTTAAGTaGTTGAAGGTTTTGACATTT +
Preference number: 4 (lower is better)
Translates to: FSYNVFQSHRSDLSKADKSSHLK*LKVLTF
Trigger: AAATGTCAAAACCTTCAATCACTTAAGGTGACTGGA...TTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAATCCATTTGTCACTTTTaGATTCAACGAATTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKSICHF*IQRISH
Trigger: GTGGGAAATTCGTTGAATCCAAAAGTGACAAATGGA...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CCA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGGCTTCATGCTGTCCATaGATGATGTTTAATGTTCCA +
Preference number: 4 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLASCCP*MMFNVP
Trigger: TGGAACATTAAACATCATCCATGGACAGCATGAAGC...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR TCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTATTCTGTTCAGCACATaGATTTCTGTTCTGACCTTA +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVILFST*ISVLTL
Trigger: TAAGGTCAGAACAGAAATTCATGTGCTGAACAGAAT...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR GCA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAAAATTTACAGCTTCATaGTGTCCATGGATGATGTTT +
Preference number: 4 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKKFTAS*CPWMMF
Trigger: AAACATCATCCATGGACAGCATGAAGCTGTAAATTT...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR GCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTTTGGTCCAACAAAGTTaGCATTTTCATAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVLVQQS*HFHSLS
Trigger: TGAAAGGCTATGAAAATGGCAACTTTGTTGGACCAA...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTGTAACAGGTCATATTTaGCTTGACATTCGAGATGAT +
Preference number: 4 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVVTGHI*LDIRDD
Trigger: ATCATCTCGAATGTCAAGCCAAATATGACCTGTTAC...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CCA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCAGGATTCAATTGGATTaGTACTGCAAAAAGAATCCA +
Preference number: 4 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIRIQLD*YCKKNP
Trigger: TGGATTCTTTTTGCAGTACCAATCCAATTGAATCCT...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CCA 90 bp TTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAACCAGCCTATAGTTGTTaGATTGGATTAAATATCACT +
Preference number: 4 (lower is better)
Translates to: FSYNVFQSHRSDLSKADKPAYSC*IGLNIT
Trigger: AGTGATATTTAATCCAATCCAACAACTATAGGCTGG...TTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS CCA 90 bp GCAGGATCCGGGCTCGCACTGCCGCCGCCGCCAATAGCGCCGCCATaGCTCTCGGCCGCCCTAGCTCCGCACCCCGCGCCTCTACTGCCC +
Preference number: 5 (lower is better)
Translates to: AGSGLALPPPPIAPP*LSAALAPHPAPLLP
Trigger: GGGCAGTAGAGGCGCGGGGTGCGGAGCTAGGGCGGCCGAGAGCCATGGCGGCGCTATTGGCGGCGGCGGCAGTGCGAGCCCGGATCCTGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS TCA 90 bp CAGCTCTGGCAGCCACTTCTTGGCTTCTCCCACAAGGACTGCTGTTaGAAGAGCCATGCAGCGCTGACCAGCAGCTCCAAATGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: QLWQPLLGFSHKDCC*KSHAALTSSSKCCP
Trigger: GGGGCAGCATTTGGAGCTGCTGGTCAGCGCTGCATGGCTCTTTCAACAGCAGTCCTTGTGGGAGAAGCCAAGAAGTGGCTGCCAGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS GCA 90 bp GCCACTTCTTGGCTTCTCCCACAAGGACTGCTGTTGAAAGAGCCATaGAGCGCTGACCAGCAGCTCCAAATGCTGCCCCAACCAGCTGGT +
Preference number: 5 (lower is better)
Translates to: ATSWLLPQGLLLKEP*SADQQLQMLPQPAG
Trigger: ACCAGCTGGTTGGGGCAGCATTTGGAGCTGCTGGTCAGCGCTGCATGGCTCTTTCAACAGCAGTCCTTGTGGGAGAAGCCAAGAAGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS TCA 90 bp TTGGCTTCTCCCACAAGGACTGCTGTTGAAAGAGCCATGCAGCGCTaGCCAGCAGCTCCAAATGCTGCCCCAACCAGCTGGTTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: LASPTRTAVERAMQR*PAAPNAAPTSWFRV
Trigger: TACCCTGAACCAGCTGGTTGGGGCAGCATTTGGAGCTGCTGGTCAGCGCTGCATGGCTCTTTCAACAGCAGTCCTTGTGGGAGAAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS TCA 90 bp CGTTTGCAGGAAGCAATGGCTGCATCCATTTCTGCCTTGGTGGCCTaGGGGACCCGACCAATGACCTCATTGGTGGCTGGGTTGTGGATA +
Preference number: 5 (lower is better)
Translates to: RLQEAMAASISALVA*GTRPMTSLVAGLWI
Trigger: TATCCACAACCCAGCCACCAATGAGGTCATTGGTCGGGTCCCTCAGGCCACCAAGGCAGAAATGGATGCAGCCATTGCTTCCTGCAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS TCA 90 bp CGTTTGCAGGAAGCAATGGCTGCATCCATTTCTGCCTTGGTGGCCTaGGGGACCCGACCAATGACCTCATTGGTGGCCACTGAAGAAGAG +
Preference number: 5 (lower is better)
Translates to: RLQEAMAASISALVA*GTRPMTSLVATEEE
Trigger: CTCTTCTTCAGTGGCCACCAATGAGGTCATTGGTCGGGTCCCTCAGGCCACCAAGGCAGAAATGGATGCAGCCATTGCTTCCTGCAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553814.5
CDS GCA 90 bp TGCAGGAAAAGCACGTTTGCAGGAAGCAATGGCTGCATCCATTTCTaGCTTGGTGGCCTGAGGGACCCGACCAATGACCTCATTGGTGGC +
Preference number: 5 (lower is better)
Translates to: CRKSTFAGSNGCIHF*LGGLRDPTNDLIGG
Trigger: GCCACCAATGAGGTCATTGGTCGGGTCCCTCAGGCCACCAAGGCAGAAATGGATGCAGCCATTGCTTCCTGCAAACGTGCTTTTCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000553814.5
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS GCA 90 bp AGTGTCTGCCCATGCAGGAAAAGCACGTTTGCAGGAAGCAATGGCTaGATCCATTTCTGCCTTGGTGGCCTGAGGGACCCGACCAATGAC +
Preference number: 5 (lower is better)
Translates to: SVCPCRKSTFAGSNG*IHFCLGGLRDPTND
Trigger: GTCATTGGTCGGGTCCCTCAGGCCACCAAGGCAGAAATGGATGCAGCCATTGCTTCCTGCAAACGTGCTTTTCCTGCATGGGCAGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000553814.5
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS CCA 90 bp CTGAAGTGTCTGCCCATGCAGGAAAAGCACGTTTGCAGGAAGCAATaGCTGCATCCATTTCTGCCTTGGTGGCCTGAGGGACCCGACCAA +
Preference number: 5 (lower is better)
Translates to: LKCLPMQEKHVCRKQ*LHPFLPWWPEGPDQ
Trigger: TTGGTCGGGTCCCTCAGGCCACCAAGGCAGAAATGGATGCAGCCATTGCTTCCTGCAAACGTGCTTTTCCTGCATGGGCAGACACTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000553814.5
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS GCA 90 bp GATGGCATGGTCTCTCCCATCATGAGGGATGTCACACTACAGGCATaGTCAACCACCTCTGGAACACAGAAGTCAGGCCATCAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: DGMVSPIMRDVTLQA*STTSGTQKSGHQLS
Trigger: GGAGAGCTGATGGCCTGACTTCTGTGTTCCAGAGGTGGTTGAGCATGCCTGTAGTGTGACATCCCTCATGATGGGAGAGACCATGCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553814.5
ENST00000554501.5
CDS GCA 90 bp GGCGGCTTAATACTGAAGTGTCTGCCCATGCAGGAAAAGCACGTTTaGAGGAAGCAATGGCTGCATCCATTTCTGCCTTGGTGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: GGLILKCLPMQEKHV*RKQWLHPFLPWWPE
Trigger: CTCAGGCCACCAAGGCAGAAATGGATGCAGCCATTGCTTCCTGCAAACGTGCTTTTCCTGCATGGGCAGACACTTCAGTATTAAGCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000553814.5
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS CCA 90 bp GGCCATGGGAAACATCCAAAGGGGGATCATGGCAGGAAAATTGAATaGAGCAATGCCTGCACACACTCCCAGAGGCAGACGGTAGGAATA +
Preference number: 5 (lower is better)
Translates to: GHGKHPKGDHGRKIE*SNACTHSQRQTVGI
Trigger: TATTCCTACCGTCTGCCTCTGGGAGTGTGTGCAGGCATTGCTCCATTCAATTTTCCTGCCATGATCCCCCTTTGGATGTTTCCCATGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
CDS TCA 90 bp GTCATGATCAACGTCTCTGCATACTGCAGAGTAAGGGAGGGTGGCTaGAAAGGTCTCTGTGAGAGTGACAAACATGCCCTAGGTGACAGT +
Preference number: 5 (lower is better)
Translates to: VMINVSAYCRVREGG*KGLCESDKHALGDS
Trigger: ACTGTCACCTAGGGCATGTTTGTCACTCTCACAGAGACCTTTTCAGCCACCCTCCCTTACTCTGCAGTATGCAGAGACGTTGATCATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556852.1
CDS TCA 90 bp ATGGTTCTTGGCTCCCATATTGGCTTGAACCCTCTTGCCATGTCTTaGTCCTCTCTCGAAGATATACTCTCCTGCCTTGTTGGATCCCAC +
Preference number: 5 (lower is better)
Translates to: MVLGSHIGLNPLAMS*SSLEDILSCLVGSH
Trigger: GTGGGATCCAACAAGGCAGGAGAGTATATCTTCGAGAGAGGATCAAGACATGGCAAGAGGGTTCAAGCCAATATGGGAGCCAAGAACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS CCA 90 bp TGTCCATGGATGATGTTTAATGTTCCATCAGGGGCACCAGAATCCTaGAGCAACTTAGCAAGAAGCATAGTTGCTCCAGGGACTCGCTCA +
Preference number: 5 (lower is better)
Translates to: CPWMMFNVPSGAPES*SNLARSIVAPGTRS
Trigger: TGAGCGAGTCCCTGGAGCAACTATGCTTCTTGCTAAGTTGCTCCAGGATTCTGGTGCCCCTGATGGAACATTAAACATCATCCATGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
CDS-3UTR CAA 90 bp CTTCTGGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACAGGACTGGATTTCACCTaGGAAGAAACCTGCAGGATC +
Preference number: 5 (lower is better)
Translates to: LLVKWCYPLFQKNLRSLTGLDFT*EETCRI
Trigger: GATCCTGCAGGTTTCTTCCAAGGTGAAATCCAGTCC...TGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTTTACAGACTCGCTCTTaGGCCTGGGGAGTGATCAGA +
Preference number: 5 (lower is better)
Translates to: TRQFPIETLRGLIVLRKILQTRS*AWGVIR
Trigger: TCTGATCACTCCCCAGGCCAAAGAGCGAGTCTGTAA...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp GGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACACAGTAAGGGTATTTTCCTTATaGGCATCTGGCATGACTACC +
Preference number: 5 (lower is better)
Translates to: GEVVLPTIPKEPQESDTVRVFSL*ASGMTT
Trigger: GGTAGTCATGCCAGATGCCAATAAGGAAAATACCCT...TACTGTGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp GGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACACAGTATGGAAGCTCCCTCCTTaGTTCCACTATCAATCAGAT +
Preference number: 5 (lower is better)
Translates to: GEVVLPTIPKEPQESDTVWKLPP*FHYQSD
Trigger: ATCTGATTGATAGTGGAACAAAGGAGGGAGCTTCCA...TACTGTGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATACGAGCAGTGGCTCCATaGGTGGTGAAGATGGCAGTT +
Preference number: 5 (lower is better)
Translates to: WFHCYTRQFPIETLRGLIRAVAP*VVKMAV
Trigger: AACTGCCATCTTCACCACCAATGGAGCCACTGCTCG...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTTCATTGGTGGCTGGGTaGTGGATATCGATCCATTTG +
Preference number: 5 (lower is better)
Translates to: TRQFPIETLRGLIVLRKISLVAG*WISIHL
Trigger: CAAATGGATCGATATCCACAACCCAGCCACCAATGA...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CAA 90 bp AATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTGGACGACCAATGACCTCATaGGTGGCTGGGTTGTGGATA +
Preference number: 5 (lower is better)
Translates to: NSRLDLLKAGVLPIFMVGRPMTS*VAGLWI
Trigger: TATCCACAACCCAGCCACCAATGAGGTCATTGGTCG...TCCAACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGCAGGAAAAGCACGTTaGCAGGAAGCAATGGCTGCA +
Preference number: 5 (lower is better)
Translates to: WFHCYTRQFPIETLRGLIAGKAR*QEAMAA
Trigger: TGCAGCCATTGCTTCCTGCAAACGTGCTTTTCCTGC...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CAA 90 bp TGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGGCTCCCATATTGGCTaGAACCCTCTTGCCATGTCT +
Preference number: 5 (lower is better)
Translates to: WFHCYTRQFPIETLRGLIGSHIG*NPLAMS
Trigger: AGACATGGCAAGAGGGTTCAAGCCAATATGGGAGCC...TATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp AATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTGGAGGCTCCCATATTGGCTaGAACCCTCTTGCCATGTCT +
Preference number: 5 (lower is better)
Translates to: NSRLDLLKAGVLPIFMVGGSHIG*NPLAMS
Trigger: AGACATGGCAAGAGGGTTCAAGCCAATATGGGAGCC...TCCAACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp GTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGTCTTTTCCACAAGGACTGCTGTaGAAAGAGCCATGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: VVVISLKSTGYTTFSRSFPQGLL*KEPCSA
Trigger: AGCGCTGCATGGCTCTTTCAACAGCAGTCCTTGTGG...AAAAGACCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS TCA 90 bp CCTGCCTTGTTGGATCCCACAAAGCTGATTGCTTTGATGTCCGGATaGTCGCAAATAAAATTTACAGCTTCATGCTGTCCATGGATGATG +
Preference number: 5 (lower is better)
Translates to: PALLDPTKLIALMSG*SQIKFTASCCPWMM
Trigger: CATCATCCATGGACAGCATGAAGCTGTAAATTTTATTTGCGATCATCCGGACATCAAAGCAATCAGCTTTGTGGGATCCAACAAGGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
CDS TCA 90 bp ACAAACTTGTTTCTAACGGCCCATGGTAGGCATGACAACAGCAGGTaGGGAAAGAGTAGCATCTTCTTCTTTCCACTGAGAAGTAATGGT +
Preference number: 5 (lower is better)
Translates to: TNLFLTAHGRHDNSR*GKSSIFFFPLRSNG
Trigger: ACCATTACTTCTCAGTGGAAAGAAGAAGATGCTACTCTTTCCTCACCTGCTGTTGTCATGCCTACCATGGGCCGTTAGAAACAAGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS-3UTR CAA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATATACTCTCCTGCCTaGTTGGATCCCACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLIYSPA*LDPTKL
Trigger: CAGCTTTGTGGGATCCAACAAGGCAGGAGAGTATAT...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCCCACAAGGACTGCTGTaGAAAGAGCCATGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIPQGLL*KEPCSA
Trigger: AGCGCTGCATGGCTCTTTCAACAGCAGTCCTTGTGG...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAATCTGGCAGCCACTTCTaGGCTTCTCCCACAAGGACT +
Preference number: 5 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKSGSHF*ASPTRT
Trigger: AGTCCTTGTGGGAGAAGCCAAGAAGTGGCTGCCAGA...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTTTCCCTATAGAAACTTaGCGGGGGTTAATAGTCCTG +
Preference number: 5 (lower is better)
Translates to: TRQFPIETLRGLIVLRKIFPIET*RGLIVL
Trigger: CAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAA...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS TCA 90 bp ATACATCTCCTTCAGCATCAGCTAGGGTCTTCCCTTGTTCCAATGTaGTTAACTTGGCAATTTCTTTCTGCTGGCGGCTTAATACTGAAG +
Preference number: 5 (lower is better)
Translates to: IHLLQHQLGSSLVPM*LTWQFLSAGGLILK
Trigger: CTTCAGTATTAAGCCGCCAGCAGAAAGAAATTGCCAAGTTAATCACATTGGAACAAGGGAAGACCCTAGCTGATGCTGAAGGAGATGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350259.8
CDS-3UTR CAA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAGGACTGGATTTCACCTaGGAAGAAACCTGCAGGATC +
Preference number: 5 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLGLDFT*EETCRI
Trigger: GATCCTGCAGGTTTCTTCCAAGGTGAAATCCAGTCC...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CAA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCCGACCAATGACCTCATaGGTGGCTGGGTTGTGGATA +
Preference number: 5 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIRPMTS*VAGLWI
Trigger: TATCCACAACCCAGCCACCAATGAGGTCATTGGTCG...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CAA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATCATGGCAGGAAAATaGAATGGAGCAATGCCTGCA +
Preference number: 5 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLIMAGK*NGAMPA
Trigger: TGCAGGCATTGCTCCATTCAATTTTCCTGCCATGAT...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CAA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAAGGCTCCCATATTGGCTaGAACCCTCTTGCCATGTCT +
Preference number: 5 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKGSHIG*NPLAMS
Trigger: AGACATGGCAAGAGGGTTCAAGCCAATATGGGAGCC...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAAGGGTATTTTCCTTATaGGCATCTGGCATGACTACC +
Preference number: 5 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLRVFSL*ASGMTT
Trigger: GGTAGTCATGCCAGATGCCAATAAGGAAAATACCCT...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGCCACAAGGACTGCTGTaGAAAGAGCCATGCAGCGCT +
Preference number: 5 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLPQGLL*KEPCSA
Trigger: AGCGCTGCATGGCTCTTTCAACAGCAGTCCTTGTGG...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGTCTGGCAGCCACTTCTaGGCTTCTCCCACAAGGACT +
Preference number: 5 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLSGSHF*ASPTRT
Trigger: AGTCCTTGTGGGAGAAGCCAAGAAGTGGCTGCCAGA...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp AGTAATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTTTGACTCTCAGGTTTTaGGCATGCTCCACCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SNSRLDLLKAGVLPIFMVLTLRF*ACSTSS
Trigger: AGAGCTGGTGGAGCATGCCAAAAACCTGAGAGTCAA...AACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAATTACAGACTCGCTCTTaGGCCTGGGGAGTGATCAGA +
Preference number: 5 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKLQTRS*AWGVIR
Trigger: TCTGATCACTCCCCAGGCCAAAGAGCGAGTCTGTAA...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTCGAGCAGTGGCTCCATaGGTGGTGAAGATGGCAGTT +
Preference number: 5 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVRAVAP*VVKMAV
Trigger: AACTGCCATCTTCACCACCAATGGAGCCACTGCTCG...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGCGAGCAGTGGCTCCATaGGTGGTGAAGATGGCAGTT +
Preference number: 5 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLRAVAP*VVKMAV
Trigger: AACTGCCATCTTCACCACCAATGGAGCCACTGCTCG...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp AGCCAGGTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGCTTACTGAGGTATCCTaGAGAAGTGATCTTAAGCAG +
Preference number: 5 (lower is better)
Translates to: SQVVVISLKSTGYTTFSRLTEVS*RSDLKQ
Trigger: CTGCTTAAGATCACTTCTCAAGGATACCTCAGTAAG...CCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCACCTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp GGTGAAGTGGTGCTACCCACTATTCCAAAAGAACCTCAGGAGTCTGACACAGTATTCATGTGTGTAGAGTaGTTGACGGTTCTGTTATTT +
Preference number: 5 (lower is better)
Translates to: GEVVLPTIPKEPQESDTVFMCVE*LTVLLF
Trigger: AAATAACAGAACCGTCAACAACTCTACACACATGAA...TACTGTGTCAGACTCCTGAGGTTCTTTTGGAATAGTGGGTAGCACCACTTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS GCA 90 bp CTCGAAGATATACTCTCCTGCCTTGTTGGATCCCACAAAGCTGATTaGTTTGATGTCCGGATGATCGCAAATAAAATTTACAGCTTCATG +
Preference number: 5 (lower is better)
Translates to: LEDILSCLVGSHKAD*FDVRMIANKIYSFM
Trigger: CATGAAGCTGTAAATTTTATTTGCGATCATCCGGACATCAAAGCAATCAGCTTTGTGGGATCCAACAAGGCAGGAGAGTATATCTTCGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
CDS-3UTR CAA 90 bp AGCCAAAATGTGTACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTGACTGCAGGAAAAGCACGTTaGCAGGAAGCAATGGCTGCA +
Preference number: 5 (lower is better)
Translates to: SQNVYYLLRKSKHSDLVTAGKAR*QEAMAA
Trigger: TGCAGCCATTGCTTCCTGCAAACGTGCTTTTCCTGC...AGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGTACACATTTTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAATTGACTCTCAGGTTTTaGGCATGCTCCACCAGCTCT +
Preference number: 5 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKLTLRF*ACSTSS
Trigger: AGAGCTGGTGGAGCATGCCAAAAACCTGAGAGTCAA...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp TTAATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGTTACAGACTCGCTCTTaGGCCTGGGGAGTGATCAGA +
Preference number: 5 (lower is better)
Translates to: LIVLRKILVTMYSNPIDLLQTRS*AWGVIR
Trigger: TCTGATCACTCCCCAGGCCAAAGAGCGAGTCTGTAA...CAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp ATCTGGTTTCATTGTTACACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTACAGGTCATATTTGGCTaGACATTCGAGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: IWFHCYTRQFPIETLRGLQVIFG*TFEMMV
Trigger: AACCATCATCTCGAATGTCAAGCCAAATATGACCTG...TAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGTGTAACAATGAAACCAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGGGCTAAAGAAAACTTaGCAGGAGGTCTCTCCCAGT +
Preference number: 5 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKGLKKT*QEVSPS
Trigger: ACTGGGAGAGACCTCCTGCAAAGTTTTCTTTAGCCC...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp AGCCAGGTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGGAGGATTCAATTGGATaGGTACTGCAAAAAGAATCC +
Preference number: 5 (lower is better)
Translates to: SQVVVISLKSTGYTTFSREDSIG*VLQKES
Trigger: GGATTCTTTTTGCAGTACCAATCCAATTGAATCCTC...CCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCACCTGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp AGCCAGGTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGGTAGAAACCTATAGGTaGCCTTTTGAAGTAAACAGC +
Preference number: 5 (lower is better)
Translates to: SQVVVISLKSTGYTTFSRVETYR*PFEVNS
Trigger: GCTGTTTACTTCAAAAGGCAACCTATAGGTTTCTAC...CCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCACCTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS GCA 90 bp CTCGAAGATATACTCTCCTGCCTTGTTGGATCCCACAAAGCTGATTaGTTTGATGTCCGGATGATCGCAAATAAAATTTACAGCTTTAAG +
Preference number: 5 (lower is better)
Translates to: LEDILSCLVGSHKAD*FDVRMIANKIYSFK
Trigger: CTTAAAGCTGTAAATTTTATTTGCGATCATCCGGACATCAAAGCAATCAGCTTTGTGGGATCCAACAAGGCAGGAGAGTATATCTTCGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555126.1
CDS-3UTR CAA 90 bp GTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGTCTTTTATCATGGCAGGAAAATaGAATGGAGCAATGCCTGCA +
Preference number: 5 (lower is better)
Translates to: VVVISLKSTGYTTFSRSFIMAGK*NGAMPA
Trigger: TGCAGGCATTGCTCCATTCAATTTTCCTGCCATGAT...AAAAGACCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTTTGACTCTCAGGTTTTaGGCATGCTCCACCAGCTCT +
Preference number: 5 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVLTLRF*ACSTSS
Trigger: AGAGCTGGTGGAGCATGCCAAAAACCTGAGAGTCAA...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp GTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGTCTTTTTTCCCTATAGAAACTTaGCGGGGGTTAATAGTCCTG +
Preference number: 5 (lower is better)
Translates to: VVVISLKSTGYTTFSRSFFPIET*RGLIVL
Trigger: CAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAA...AAAAGACCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp ACTAGGCAGTTCCCTATAGAAACTTTGCGGGGGTTAATAGTCCTGAGGAAGATTGCTGTTGCCACAACTTaGGGATATATAAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: TRQFPIETLRGLIVLRKIAVATT*GYIKMD
Trigger: ATCCATTTTTATATATCCCAAAGTTGTGGCAACAGC...AATCTTCCTCAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAACTGCCTAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp AATAGCAGGTTAGATTTGCTTAAGGCAGGTGTCTTACCCATTTTCATGGTTGGAAAAAATCACTACCAGTaGCCAGCTGTGATAAGAGCT +
Preference number: 5 (lower is better)
Translates to: NSRLDLLKAGVLPIFMVGKNHYQ*PAVIRA
Trigger: AGCTCTTATCACAGCTGGCAACTGGTAGTGATTTTT...TCCAACCATGAAAATGGGTAAGACACCTGCCTTAAGCAAATCTAACCTGCTATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp AGCCAAAATGTGTACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTGACTTCATTGGTGGCTGGGTaGTGGATATCGATCCATTTG +
Preference number: 5 (lower is better)
Translates to: SQNVYYLLRKSKHSDLVTSLVAG*WISIHL
Trigger: CAAATGGATCGATATCCACAACCCAGCCACCAATGA...AGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGTACACATTTTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTATATACTCTCCTGCCTaGTTGGATCCCACAAAGCTG +
Preference number: 5 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVIYSPA*LDPTKL
Trigger: CAGCTTTGTGGGATCCAACAAGGCAGGAGAGTATAT...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAAGGGTATTTTCCTTATaGGCATCTGGCATGACTACC +
Preference number: 5 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKRVFSL*ASGMTT
Trigger: GGTAGTCATGCCAGATGCCAATAAGGAAAATACCCT...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp ATAGTCCTGAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGGAAGCTCCCTCCTTaGTTCCACTATCAATCAGAT +
Preference number: 5 (lower is better)
Translates to: IVLRKILVTMYSNPIDLIWKLPP*FHYQSD
Trigger: ATCTGATTGATAGTGGAACAAAGGAGGGAGCTTCCA...GATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTCAGGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAATTCCCTATAGAAACTTaGCGGGGGTTAATAGTCCTG +
Preference number: 5 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKFPIET*RGLIVL
Trigger: CAGGACTATTAACCCCCGCAAAGTTTCTATAGGGAA...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp GTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGTCTTTTTCCCCATGTCGCTTCTaGCTAAATCACGGTTATTTT +
Preference number: 5 (lower is better)
Translates to: VVVISLKSTGYTTFSRSFSPCRF*LNHGYF
Trigger: AAAATAACCGTGATTTAGCAAGAAGCGACATGGGGA...AAAAGACCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAAACAATGTATATTGTaGTCACCCTTCCCCATGTCG +
Preference number: 5 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLKQCIL*SPFPMS
Trigger: CGACATGGGGAAGGGTGACAACAATATACATTGTTT...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAAGGGAAACAAAGGAATTaGGGTAAGAGCTCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKGKQRN*GKSSLA
Trigger: AGCAAGAGAGCTCTTACCCAAATTCCTTTGTTTCCC...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTATGGATATCGATCCATTaGTCACTTTTGGATTCAACG +
Preference number: 5 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLWISIH*SLLDST
Trigger: CGTTGAATCCAAAAGTGACAAATGGATCGATATCCA...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CAA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTTGGAAGCTCCCTCCTTaGTTCCACTATCAATCAGAT +
Preference number: 5 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVWKLPP*FHYQSD
Trigger: ATCTGATTGATAGTGGAACAAAGGAGGGAGCTTCCA...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp TTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAGCTGACAAACAGGTCATATTTGGCTaGACATTCGAGATGATGGTT +
Preference number: 5 (lower is better)
Translates to: FSYNVFQSHRSDLSKADKQVIFG*TFEMMV
Trigger: AACCATCATCTCGAATGTCAAGCCAAATATGACCTG...TTTGTCAGCTTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000555126.1
CDS-3UTR CAA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAATCAAACAATGTATATaGTTGTCACCCTTCCCCATG +
Preference number: 5 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLIKQCI*LSPFPM
Trigger: CATGGGGAAGGGTGACAACAATATACATTGTTTGAT...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTCAGTTCCAGACTATGTaGTTTCTGACAGTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVQFQTM*FLTVGK
Trigger: TTTCCCCACTGTCAGAAACAACATAGTCTGGAACTG...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAATCCATTTGTCACTTTaGGATTCAACGAATTTCCCA +
Preference number: 5 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLIHLSL*DSTNFP
Trigger: TGGGAAATTCGTTGAATCCAAAAGTGACAAATGGAT...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CAA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAATTCTTTAATAAGTTGTaGATAGCGGAGCAAGACCTG +
Preference number: 5 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKFFNKL*IAEQDL
Trigger: CAGGTCTTGCTCCGCTATCAACAACTTATTAAAGAA...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp CAAATGAAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAGTTTTCTTTAATAAGTaGTTGATAGCGGAGCAAGAC +
Preference number: 5 (lower is better)
Translates to: QMKLVKNKGRLLRMESVLVFFNK*LIAEQD
Trigger: GTCTTGCTCCGCTATCAACAACTTATTAAAGAAAAC...TAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTTCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp GTGGTAGTAATAAGCCTCAAATCCACAGGGTACACAACATTTTCAAGGTCTTTTCATTCATTATCTTTGTaGACTTTTACCCACTACAGG +
Preference number: 5 (lower is better)
Translates to: VVVISLKSTGYTTFSRSFHSLSL*TFTHYR
Trigger: CCTGTAGTGGGTAAAAGTCAACAAAGATAATGAATG...AAAAGACCTTGAAAATGTTGTGTACCCTGTGGATTTGAGGCTTATTACTACCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp GAGGAAGATTTTAGTTACAATGTATTCCAATCCCATCGATCTGATCTGAGCAAAATCCATTTGTCACTTTaGGATTCAACGAATTTCCCA +
Preference number: 5 (lower is better)
Translates to: EEDFSYNVFQSHRSDLSKIHLSL*DSTNFP
Trigger: TGGGAAATTCGTTGAATCCAAAAGTGACAAATGGAT...TTTGCTCAGATCAGATCGATGGGATTGGAATACATTGTAACTAAAATCTTCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350259.8
ENST00000553458.6
CDS-3UTR CAA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAAAAAAGAAAGAAGCTGTaGCCACAACTTTGGGATATA +
Preference number: 5 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKKRKKL*PQLWDI
Trigger: TATATCCCAAAGTTGTGGCAACAGCTTCTTTCTTTT...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTTGGTTGGAACAATCCTaGATTTCTGGGCCTAAAATA +
Preference number: 5 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVWLEQS*ISGPKI
Trigger: TATTTTAGGCCCAGAAATCAAGGATTGTTCCAACCA...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp AGCCAAAATGTGTACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTGACTAATAGCAGGTTAGATTaGCTTAAGGCAGGTGTCTTA +
Preference number: 5 (lower is better)
Translates to: SQNVYYLLRKSKHSDLVTNSRLD*LKAGVL
Trigger: TAAGACACCTGCCTTAAGCAAATCTAACCTGCTATT...AGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGTACACATTTTGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp AAGCTGGTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAAATGTGTGTAGAGTTGTaGACGGTTCTGTTATTTTGT +
Preference number: 5 (lower is better)
Translates to: KLVKNKGRLLRMESVLNKMCVEL*TVLLFC
Trigger: ACAAAATAACAGAACCGTCAACAACTCTACACACAT...TTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGACCAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp AGCCAAAATGTGTACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTGACTGTTCTTGTGGGCATCTaGAATGTGCTAATTGAAAGT +
Preference number: 5 (lower is better)
Translates to: SQNVYYLLRKSKHSDLVTVLVGI*NVLIES
Trigger: ACTTTCAATTAGCACATTCAAGATGCCCACAAGAAC...AGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGTACACATTTTGGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTATTATATCTTGTGTATaGTGGGATAAAAGAGGGGCT +
Preference number: 5 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVIISCV*WDKRGA
Trigger: AGCCCCTCTTTTATCCCACAATACACAAGATATAAT...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp AGCCAAAATGTGTACTATCTTTTACGTAAGAGTAAACATAGTGACCTTGTGACTAAGTTGATTTATCCATaGCTTACTGAGGTATCCTTG +
Preference number: 5 (lower is better)
Translates to: SQNVYYLLRKSKHSDLVTKLIYP*LTEVSL
Trigger: CAAGGATACCTCAGTAAGCAATGGATAAATCAACTT...AGTCACAAGGTCACTATGTTTACTCTTACGTAAAAGATAGTACACATTTTGGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS-3UTR CAA 90 bp GTCAAAAATAAAGGGAGATTACTCAGGATGGAGTCAGTCTTAAACAAACTTGTTTACCCATTTTCATGGTaGGAACAATCCTTGATTTCT +
Preference number: 5 (lower is better)
Translates to: VKNKGRLLRMESVLNKLVYPFSW*EQSLIS
Trigger: AGAAATCAAGGATTGTTCCAACCATGAAAATGGGTA...AACAAGTTTGTTTAAGACTGACTCCATCCTGAGTAATCTCCCTTTATTTTTGAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553458.6
CDS CCA 72 bp GGGCTCGCACTGCCGCCGCCGCCAATAGCGCCGCCATaGCTCTCGGCCGCCCTAGCTCCGCACCCCGCGCCT +
Preference number: 6 (lower is better)
Translates to: GLALPPPPIAPP*LSAALAPHPAP
Trigger: AGGCGCGGGGTGCGGAGCTAGGGCGGCCGAGAGCCATGGCGGCGCTATTGGCGGCGGCGGCAGTGCGAGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS CAA 90 bp CCAGCTCTGGCAGCCACTTCTTGGCTTCTCCCACAAGGACTGCTGTaGAAAGAGCCATGCAGCGCTGACCAGCAGCTCCAAATGCTGCCC +
Preference number: 6 (lower is better)
Translates to: PALAATSWLLPQGLL*KEPCSADQQLQMLP
Trigger: GGGCAGCATTTGGAGCTGCTGGTCAGCGCTGCATGGCTCTTTCAACAGCAGTCCTTGTGGGAGAAGCCAAGAAGTGGCTGCCAGAGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS TCA 72 bp GAAGCAATGGCTGCATCCATTTCTGCCTTGGTGGCCTaGGGGACCCGACCAATGACCTCATTGGTGGCTGGG +
Preference number: 6 (lower is better)
Translates to: EAMAASISALVA*GTRPMTSLVAG
Trigger: CCCAGCCACCAATGAGGTCATTGGTCGGGTCCCTCAGGCCACCAAGGCAGAAATGGATGCAGCCATTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS TCA 72 bp CCATTTCTGCCTTGGTGGCCTGAGGGACCCGACCAATaGCCTCATTGGTGGCTGGGTTGTGGATATCGATCC +
Preference number: 6 (lower is better)
Translates to: PFLPWWPEGPDQ*PHWWLGCGYRS
Trigger: GGATCGATATCCACAACCCAGCCACCAATGAGGTCATTGGTCGGGTCCCTCAGGCCACCAAGGCAGAAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS TCA 72 bp GAAGCAATGGCTGCATCCATTTCTGCCTTGGTGGCCTaGGGGACCCGACCAATGACCTCATTGGTGGCCACT +
Preference number: 6 (lower is better)
Translates to: EAMAASISALVA*GTRPMTSLVAT
Trigger: AGTGGCCACCAATGAGGTCATTGGTCGGGTCCCTCAGGCCACCAAGGCAGAAATGGATGCAGCCATTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553814.5
CDS GCA 72 bp AGCACGTTTGCAGGAAGCAATGGCTGCATCCATTTCTaGCTTGGTGGCCTGAGGGACCCGACCAATGACCTC +
Preference number: 6 (lower is better)
Translates to: STFAGSNGCIHF*LGGLRDPTNDL
Trigger: GAGGTCATTGGTCGGGTCCCTCAGGCCACCAAGGCAGAAATGGATGCAGCCATTGCTTCCTGCAAACGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000553814.5
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS GCA 72 bp CCATGCAGGAAAAGCACGTTTGCAGGAAGCAATGGCTaGATCCATTTCTGCCTTGGTGGCCTGAGGGACCCG +
Preference number: 6 (lower is better)
Translates to: PCRKSTFAGSNG*IHFCLGGLRDP
Trigger: CGGGTCCCTCAGGCCACCAAGGCAGAAATGGATGCAGCCATTGCTTCCTGCAAACGTGCTTTTCCTGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000553814.5
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS CAA 90 bp ACTCTCAGGTTTTTGGCATGCTCCACCAGCTCTGGCAGCCACTTCTaGGCTTCTCCCACAAGGACTGCTGTTGAAAGAGCCATGCAGCGC +
Preference number: 6 (lower is better)
Translates to: TLRFLACSTSSGSHF*ASPTRTAVERAMQR
Trigger: GCGCTGCATGGCTCTTTCAACAGCAGTCCTTGTGGGAGAAGCCAAGAAGTGGCTGCCAGAGCTGGTGGAGCATGCCAAAAACCTGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS TCA 72 bp CAGCCACTTCTTGGCTTCTCCCACAAGGACTGCTGTTaGAAGAGCCATGCAGCGCTGACCAGCAGCTCCAAA +
Preference number: 6 (lower is better)
Translates to: QPLLGFSHKDCC*KSHAALTSSSK
Trigger: TTTGGAGCTGCTGGTCAGCGCTGCATGGCTCTTTCAACAGCAGTCCTTGTGGGAGAAGCCAAGAAGTGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS TCA 72 bp CCATTTCTGCCTTGGTGGCCTGAGGGACCCGACCAATaGCCTCATTGGTGGCCACTGAAGAAGAGAAGGAAG +
Preference number: 6 (lower is better)
Translates to: PFLPWWPEGPDQ*PHWWPLKKRRK
Trigger: CTTCCTTCTCTTCTTCAGTGGCCACCAATGAGGTCATTGGTCGGGTCCCTCAGGCCACCAAGGCAGAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553814.5
CDS CCA 72 bp CTGCCCATGCAGGAAAAGCACGTTTGCAGGAAGCAATaGCTGCATCCATTTCTGCCTTGGTGGCCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: LPMQEKHVCRKQ*LHPFLPWWPEG
Trigger: TCCCTCAGGCCACCAAGGCAGAAATGGATGCAGCCATTGCTTCCTGCAAACGTGCTTTTCCTGCATGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000553814.5
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS CCA 72 bp GGGACATTCACTCCCACCTGTCCAACATCCACCAAGTaGGCATATTTCCGAGCAGTGGCTCCATTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: GTFTPTCPTSTK*AYFRAVAPLVV
Trigger: CACCACCAATGGAGCCACTGCTCGGAAATATGCCCACTTGGTGGATGTTGGACAGGTGGGAGTGAATGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS TCA 72 bp CAATCAGATTACAGACTCGCTCTTTGGCCTGGGGAGTaGTCAGAGGGCCAAGATCAGCTCCAGGCTGATCTC +
Preference number: 6 (lower is better)
Translates to: QSDYRLALWPGE*SEGQDQLQADL
Trigger: GAGATCAGCCTGGAGCTGATCTTGGCCCTCTGATCACTCCCCAGGCCAAAGAGCGAGTCTGTAATCTGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS CCA 72 bp ATTGACTCTCAGGTTTTTGGCATGCTCCACCAGCTCTaGCAGCCACTTCTTGGCTTCTCCCACAAGGACTGC +
Preference number: 6 (lower is better)
Translates to: IDSQVFGMLHQL*QPLLGFSHKDC
Trigger: GCAGTCCTTGTGGGAGAAGCCAAGAAGTGGCTGCCAGAGCTGGTGGAGCATGCCAAAAACCTGAGAGTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS GCA 72 bp GTCTCTCCCATCATGAGGGATGTCACACTACAGGCATaGTCAACCACCTCTGGAACACAGAAGTCAGGCCAT +
Preference number: 6 (lower is better)
Translates to: VSPIMRDVTLQA*STTSGTQKSGH
Trigger: ATGGCCTGACTTCTGTGTTCCAGAGGTGGTTGAGCATGCCTGTAGTGTGACATCCCTCATGATGGGAGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553814.5
ENST00000554501.5
CDS CCA 72 bp AAACATCCAAAGGGGGATCATGGCAGGAAAATTGAATaGAGCAATGCCTGCACACACTCCCAGAGGCAGACG +
Preference number: 6 (lower is better)
Translates to: KHPKGDHGRKIE*SNACTHSQRQT
Trigger: CGTCTGCCTCTGGGAGTGTGTGCAGGCATTGCTCCATTCAATTTTCCTGCCATGATCCCCCTTTGGATGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
CDS CAA 72 bp ATGGGAAACATCCAAAGGGGGATCATGGCAGGAAAATaGAATGGAGCAATGCCTGCACACACTCCCAGAGGC +
Preference number: 6 (lower is better)
Translates to: MGNIQRGIMAGK*NGAMPAHTPRG
Trigger: GCCTCTGGGAGTGTGTGCAGGCATTGCTCCATTCAATTTTCCTGCCATGATCCCCCTTTGGATGTTTCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
CDS GCA 72 bp ATGCAGTACAAGGGAGAGAGTCATGATCAACGTCTCTaGATACTGCAGAGTAAGGGAGGGTGGCTGAAAAGG +
Preference number: 6 (lower is better)
Translates to: MQYKGESHDQRL*ILQSKGGWLKR
Trigger: CCTTTTCAGCCACCCTCCCTTACTCTGCAGTATGCAGAGACGTTGATCATGACTCTCTCCCTTGTACTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556852.1
CDS CCA 72 bp AAGAAGAGAAGGAAGATGCTGAATACCAGGTGGGACTaGATTTCACCTTGGAAGAAACCTGCAGGATCCGGG +
Preference number: 6 (lower is better)
Translates to: KKRRKMLNTRWD*ISPWKKPAGSG
Trigger: CCCGGATCCTGCAGGTTTCTTCCAAGGTGAAATCCAGTCCCACCTGGTATTCAGCATCTTCCTTCTCTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000553814.5
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS CAA 90 bp CATGGTTCTTGGCTCCCATATTGGCTTGAACCCTCTTGCCATGTCTaGATCCTCTCTCGAAGATATACTCTCCTGCCTTGTTGGATCCCA +
Preference number: 6 (lower is better)
Translates to: HGSWLPYWLEPSCHV*ILSRRYTLLPCWIP
Trigger: TGGGATCCAACAAGGCAGGAGAGTATATCTTCGAGAGAGGATCAAGACATGGCAAGAGGGTTCAAGCCAATATGGGAGCCAAGAACCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS TCA 72 bp GCTGGTTCAGGGTATTTTCCTTATTGGCATCTGGCATaGCTACCCCATGGTTCTTGGCTCCCATATTGGCTT +
Preference number: 6 (lower is better)
Translates to: AGSGYFPYWHLA*LPHGSWLPYWL
Trigger: AAGCCAATATGGGAGCCAAGAACCATGGGGTAGTCATGCCAGATGCCAATAAGGAAAATACCCTGAACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS CAA 72 bp TGGCTCCCATATTGGCTTGAACCCTCTTGCCATGTCTaGATCCTCTCTCGAAGATATACTCTCCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: WLPYWLEPSCHV*ILSRRYTLLPC
Trigger: ACAAGGCAGGAGAGTATATCTTCGAGAGAGGATCAAGACATGGCAAGAGGGTTCAAGCCAATATGGGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS GCA 72 bp CATGGTTCTTGGCTCCCATATTGGCTTGAACCCTCTTaGCATGTCTTGATCCTCTCTCGAAGATATACTCTC +
Preference number: 6 (lower is better)
Translates to: HGSWLPYWLEPS*HVLILSRRYTL
Trigger: GAGAGTATATCTTCGAGAGAGGATCAAGACATGGCAAGAGGGTTCAAGCCAATATGGGAGCCAAGAACCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS CCA 72 bp ATGATGTTTAATGTTCCATCAGGGGCACCAGAATCCTaGAGCAACTTAGCAAGAAGCATAGTTGCTCCAGGG +
Preference number: 6 (lower is better)
Translates to: MMFNVPSGAPES*SNLARSIVAPG
Trigger: CCCTGGAGCAACTATGCTTCTTGCTAAGTTGCTCCAGGATTCTGGTGCCCCTGATGGAACATTAAACATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
CDS CCA 72 bp AACCAGCTGGTTCAGGGTATTTTCCTTATTGGCATCTaGCATGACTACCCCATGGTTCTTGGCTCCCATATT +
Preference number: 6 (lower is better)
Translates to: NQLVQGIFLIGI*HDYPMVLGSHI
Trigger: AATATGGGAGCCAAGAACCATGGGGTAGTCATGCCAGATGCCAATAAGGAAAATACCCTGAACCAGCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS CAA 72 bp TGTCTTGATCCTCTCTCGAAGATATACTCTCCTGCCTaGTTGGATCCCACAAAGCTGATTGCTTTGATGTCC +
Preference number: 6 (lower is better)
Translates to: CLDPLSKIYSPA*LDPTKLIALMS
Trigger: GGACATCAAAGCAATCAGCTTTGTGGGATCCAACAAGGCAGGAGAGTATATCTTCGAGAGAGGATCAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS CAA 90 bp ACCTCATTGGTGGCTGGGTTGTGGATATCGATCCATTTGTCACTTTaGGATTCAACGAATTTCCCACCAATGAAGAGCTTTACAGTTGGC +
Preference number: 6 (lower is better)
Translates to: TSLVAGLWISIHLSL*DSTNFPPMKSFTVG
Trigger: GCCAACTGTAAAGCTCTTCATTGGTGGGAAATTCGTTGAATCCAAAAGTGACAAATGGATCGATATCCACAACCCAGCCACCAATGAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS CAA 90 bp CGACCAATGACCTCATTGGTGGCTGGGTTGTGGATATCGATCCATTaGTCACTTTTGGATTCAACGAATTTCCCACCAATGAAGAGCTTT +
Preference number: 6 (lower is better)
Translates to: RPMTSLVAGLWISIH*SLLDSTNFPPMKSF
Trigger: AAAGCTCTTCATTGGTGGGAAATTCGTTGAATCCAAAAGTGACAAATGGATCGATATCCACAACCCAGCCACCAATGAGGTCATTGGTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS CAA 72 bp ACCTCATTGGTGGCTGGGTTGTGGATATCGATCCATTaGTCACTTTTGGATTCAACGAATTTCCCACCAATG +
Preference number: 6 (lower is better)
Translates to: TSLVAGLWISIH*SLLDSTNFPPM
Trigger: CATTGGTGGGAAATTCGTTGAATCCAAAAGTGACAAATGGATCGATATCCACAACCCAGCCACCAATGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS CAA 72 bp GTGGCTGGGTTGTGGATATCGATCCATTTGTCACTTTaGGATTCAACGAATTTCCCACCAATGAAGAGCTTT +
Preference number: 6 (lower is better)
Translates to: VAGLWISIHLSL*DSTNFPPMKSF
Trigger: AAAGCTCTTCATTGGTGGGAAATTCGTTGAATCCAAAAGTGACAAATGGATCGATATCCACAACCCAGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS CAA 72 bp TTTTTCGTCCATCAAGAAGGATGGAAGCTCCCTCCTTaGTTCCACTATCAATCAGATTACAGACTCGCTCTT +
Preference number: 6 (lower is better)
Translates to: FFVHQEGWKLPP*FHYQSDYRLAL
Trigger: AAGAGCGAGTCTGTAATCTGATTGATAGTGGAACAAAGGAGGGAGCTTCCATCCTTCTTGATGGACGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
ENST00000555126.1
CDS TCA 72 bp TTGGATCCCACAAAGCTGATTGCTTTGATGTCCGGATaGTCGCAAATAAAATTTACAGCTTCATGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: LDPTKLIALMSG*SQIKFTASCCP
Trigger: TGGACAGCATGAAGCTGTAAATTTTATTTGCGATCATCCGGACATCAAAGCAATCAGCTTTGTGGGATCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554501.5
CDS TCA 72 bp ATTTGTCACTTTTGGATTCAACGAATTTCCCACCAATaGAGAGCTTTACAGTTGGCACTGAAGAAGAGAAGG +
Preference number: 6 (lower is better)
Translates to: ICHFWIQRISHQ*RALQLALKKRR
Trigger: CCTTCTCTTCTTCAGTGCCAACTGTAAAGCTCTTCATTGGTGGGAAATTCGTTGAATCCAAAAGTGACAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350259.8
ENST00000553458.6
ENST00000554231.5
ENST00000554501.5
ENST00000556852.1
CDS CAA 72 bp CTAAAACATCCAACCATCACTCAACACCTTGATTTTTaGGTAGCCAGATTAAGTAGCCATATGCATAAGGGC +
Preference number: 6 (lower is better)
Translates to: LKHPTITQHLDF*VARLSSHMHKG
Trigger: GCCCTTATGCATATGGCTACTTAATCTGGCTACCAAAAAATCAAGGTGTTGAGTGATGGTTGGATGTTTTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554231.5
CDS CAA 90 bp TTCCTTATCCTAAAACATCCAACCATCACTCAACACCTTGATTTTTaGGTAGCCAGATTAAGTAGCCATATGCATAAGGGCAGTTACCTT +
Preference number: 6 (lower is better)
Translates to: FLILKHPTITQHLDF*VARLSSHMHKGSYL
Trigger: AAGGTAACTGCCCTTATGCATATGGCTACTTAATCTGGCTACCAAAAAATCAAGGTGTTGAGTGATGGTTGGATGTTTTAGGATAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554231.5