Pregenerated sensors for AKIRIN2 (Homo sapiens)

Ensembl gene IDs: ENSG00000135334

Ensembl transcript IDs: ENST00000257787.6, ENST00000420494.2

Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GGGAGGCAGCGGCCGAGGTGGGCGCCGACAATGGCGCACATCGCCTaGGCTTCGGGGACGCCGGGCTCAACAGCGGGTCGAAATCCAGAG	+
Preference number: 5 (lower is better) Translates to: GRQRPRWAPTMAHIA*ASGTPGSTAGRNPE Trigger: CTCTGGATTTCGACCCGCTGTTGAGCCCGGCGTCCCCGAAGCGCAGGCGATGTGCGCCATTGTCGGCGCCCACCTCGGCCGCTGCCTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257787.6
CDS GCA 90 bp	AGTAGCTTGCGAGCGGCGATCGATGCAGAGAGATTGCGAGGTAGCTaGCGCAGCAGGAACCCAAGCGAACACGTCCAACCGCTTCCCCTC	+
Preference number: 5 (lower is better) Translates to: SSLRAAIDAERLRGS*RSRNPSEHVQPLPL Trigger: GAGGGGAAGCGGTTGGACGTGTTCGCTTGGGTTCCTGCTGCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257787.6
CDS GCA 90 bp	CGAGTACGGTCAGTAGCTTGCGAGCGGCGATCGATGCAGAGAGATTaGGAGGTAGCTGCCGCAGCAGGAACCCAAGCGAACACGTCCAAC	+
Preference number: 5 (lower is better) Translates to: RVRSVACERRSMQRD*EVAAAAGTQANTSN Trigger: GTTGGACGTGTTCGCTTGGGTTCCTGCTGCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACTGACCGTACTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6
CDS CCA 90 bp	TCTCAGGAAATGTTTCAAGATGAAAAGCAAAAGTCTGAAGTCCCTTaGAATCTTGGGTTGATTTCTTCATTATTCTCAAGGCTAGGTTGT	+
Preference number: 5 (lower is better) Translates to: SQEMFQDEKQKSEVP*NLGLISSLFSRLGC Trigger: ACAACCTAGCCTTGAGAATAATGAAGAAATCAACCCAAGATTCCAAGGGACTTCAGACTTTTGCTTTTCATCTTGAAACATTTCCTGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420494.2
CDS GCA 72 bp	CGGCCGAGGTGGGCGCCGACAATGGCGCACATCGCCTaGGCTTCGGGGACGCCGGGCTCAACAGCGGGTCGA	+
Preference number: 6 (lower is better) Translates to: RPRWAPTMAHIA*ASGTPGSTAGR Trigger: TCGACCCGCTGTTGAGCCCGGCGTCCCCGAAGCGCAGGCGATGTGCGCCATTGTCGGCGCCCACCTCGGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257787.6
CDS CCA 72 bp	TCAACAGCGGGTCGAAATCCAGAGTCCTTTTCAGAGTaGCTCCGCACGCCATGGCCGGGGGCAGCTGAGGCG	+
Preference number: 6 (lower is better) Translates to: STAGRNPESFSE*LRTPWPGAAEA Trigger: CGCCTCAGCTGCCCCCGGCCATGGCGTGCGGAGCCACTCTGAAAAGGACTCTGGATTTCGACCCGCTGTTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257787.6
CDS CAA 90 bp	GAGGCTGGAACGCGGCTCCTAATACGCCCGAGTACGGTCAGTAGCTaGCGAGCGGCGATCGATGCAGAGAGATTGCGAGGTAGCTGCCGC	+
Preference number: 6 (lower is better) Translates to: EAGTRLLIRPSTVSS*RAAIDAERLRGSCR Trigger: GCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACTGACCGTACTCGGGCGTATTAGGAGCCGCGTTCCAGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6
CDS GCA 72 bp	CGAGCGGCGATCGATGCAGAGAGATTGCGAGGTAGCTaGCGCAGCAGGAACCCAAGCGAACACGTCCAACCG	+
Preference number: 6 (lower is better) Translates to: RAAIDAERLRGS*RSRNPSEHVQP Trigger: CGGTTGGACGTGTTCGCTTGGGTTCCTGCTGCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6
CDS CAA 90 bp	CCGAGTACGGTCAGTAGCTTGCGAGCGGCGATCGATGCAGAGAGATaGCGAGGTAGCTGCCGCAGCAGGAACCCAAGCGAACACGTCCAA	+
Preference number: 6 (lower is better) Translates to: PSTVSSLRAAIDAER*RGSCRSRNPSEHVQ Trigger: TTGGACGTGTTCGCTTGGGTTCCTGCTGCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACTGACCGTACTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6
CDS GCA 72 bp	TCAGTAGCTTGCGAGCGGCGATCGATGCAGAGAGATTaGGAGGTAGCTGCCGCAGCAGGAACCCAAGCGAAC	+
Preference number: 6 (lower is better) Translates to: SVACERRSMQRD*EVAAAAGTQAN Trigger: GTTCGCTTGGGTTCCTGCTGCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6
CDS CAA 72 bp	GTCAGTAGCTTGCGAGCGGCGATCGATGCAGAGAGATaGCGAGGTAGCTGCCGCAGCAGGAACCCAAGCGAA	+
Preference number: 6 (lower is better) Translates to: VSSLRAAIDAER*RGSCRSRNPSE Trigger: TTCGCTTGGGTTCCTGCTGCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6
CDS CAA 72 bp	ACGCGGCTCCTAATACGCCCGAGTACGGTCAGTAGCTaGCGAGCGGCGATCGATGCAGAGAGATTGCGAGGT	+
Preference number: 6 (lower is better) Translates to: TRLLIRPSTVSS*RAAIDAERLRG Trigger: ACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACTGACCGTACTCGGGCGTATTAGGAGCCGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6
CDS TCA 72 bp	AAAGTTCAACATTTCTCAAGGTCTAGACTTATAGTGTaGTCATATTACAGTACTCGGGAAGAGCATTTTCTT	+
Preference number: 6 (lower is better) Translates to: KVQHFSRSRLIV*SYYSTREEHFL Trigger: AAGAAAATGCTCTTCCCGAGTACTGTAATATGATCACACTATAAGTCTAGACCTTGAGAAATGTTGAACTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420494.2

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