RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGTPBP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000135049

Ensembl transcript IDs: ENST00000337006.8, ENST00000357081.8, ENST00000376080.2, ENST00000376081.8, ENST00000376083.7, ENST00000489265.1, ENST00000491784.3, ENST00000628899.1

Found 325 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATACACATTTATTATCTTaGAACCAAACTGGCCCAAGT +
Preference number: 2 (lower is better)
Translates to: VECNGFKANPGLLQSQPNTHLLS*NQTGPS
Trigger: ACTTGGGCCAGTTTGGTTTCAAGATAATAAATGTGT...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
3UTR-3UTR TCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGACACATTTATTATCTTaGAACCAAACTGGCCCAAGT +
Preference number: 2 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILTHLLS*NQTGPS
Trigger: ACTTGGGCCAGTTTGGTTTCAAGATAATAAATGTGT...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
3UTR-3UTR GCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAAGAACAGTCTTATCTaGAATATCTACCCACTTCTA +
Preference number: 2 (lower is better)
Translates to: VECNGFKANPGLLQSQPNKNSLI*NIYPLL
Trigger: TAGAAGTGGGTAGATATTGCAGATAAGACTGTTCTT...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
3UTR-3UTR CAA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAACACATTTATTATCTaGAAACCAAACTGGCCCAAG +
Preference number: 3 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILNTFII*KPNWPK
Trigger: CTTGGGCCAGTTTGGTTTCAAGATAATAAATGTGTT...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
3UTR-3UTR CAA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAACACATTTATTATCTaGAAACCAAACTGGCCCAAG +
Preference number: 3 (lower is better)
Translates to: VECNGFKANPGLLQSQPNNTFII*KPNWPK
Trigger: CTTGGGCCAGTTTGGTTTCAAGATAATAAATGTGTT...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
3UTR-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTAACACATTTATTATCTaGAAACCAAACTGGCCCAAG +
Preference number: 3 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSNTFII*KPNWPK
Trigger: CTTGGGCCAGTTTGGTTTCAAGATAATAAATGTGTT...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATGCCCACCGCACGCCTTaGCAGCCGGCTCCCAGCACG +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNAHRTP*QPAPST
Trigger: CGTGCTGGGAGCCGGCTGGCAAGGCGTGCGGTGGGC...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337006.8
CDS-3UTR CCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATCTCAGGATGGGGCGCTaGCGGGGACCGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNLRMGR*RGPRRA
Trigger: GGCTCTGCGCGGTCCCCGCCAGCGCCCCATCCTGAG...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATGCCCACCGCACGCCTTaGCAGCCGGCTCCCAGCACG +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNAHRTP*QPAPST
Trigger: CGTGCTGGGAGCCGGCTGGCAAGGCGTGCGGTGGGC...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000628899.1
CDS-3UTR CCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCTCAGGATGGGGCGCTaGCGGGGACCGCGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNLRMGR*RGPRRA
Trigger: GGCTCTGCGCGGTCCCCGCCAGCGCCCCATCCTGAG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTACCCGGCTCAGCACCTaGATCACGGCGGATCCCTCG +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSTRLST*ITADPS
Trigger: CGAGGGATCCGCCGTGATCCAGGTGCTGAGCCGGGT...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR CCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGATAATCGGCTCAGGATaGGGCGCTGGCGGGGACCGC +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKIIGSG*GAGGDR
Trigger: GCGGTCCCCGCCAGCGCCCCATCCTGAGCCGATTAT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATACCCGGCTCAGCACCTaGATCACGGCGGATCCCTCG +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNTRLST*ITADPS
Trigger: CGAGGGATCCGCCGTGATCCAGGTGCTGAGCCGGGT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000628899.1
CDS-3UTR CCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATATAATCGGCTCAGGATaGGGCGCTGGCGGGGACCGC +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNIIGSG*GAGGDR
Trigger: GCGGTCCCCGCCAGCGCCCCATCCTGAGCCGATTAT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATGAGGATCCAGAGTCCTaGCTGCCAGACATTCTTGCG +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNEDPES*LPDILA
Trigger: CGCAAGAATGTCTGGCAGTCAGGACTCTGGATCCTC...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR TCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGTCGACCTCCACCAGCTaGCACCAGCTCAACAAGAAT +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILSTSTS*HQLNKN
Trigger: ATTCTTGTTGAGCTGGTGTCAGCTGGTGGAGGTCGA...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTGCTGCTCATGCAAAATaGTGGGGCGATATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSAAHAK*WGDMAQ
Trigger: CTGAGCCATATCGCCCCAGCATTTTGCATGAGCAGC...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATGCTGCTCATGCAAAATaGTGGGGCGATATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNAAHAK*WGDMAQ
Trigger: CTGAGCCATATCGCCCCAGCATTTTGCATGAGCAGC...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATGCAGTTAACAAGAGATaGCAGCGGGCTCAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNAVNKR*QRAQGR
Trigger: CCTACCTTGAGCCCGCTGCCATCTCTTGTTAACTGC...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGTTGATCTTCTCCAGTTaGGCCAGGAGTCCTACGATC +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILLIFSS*ARSPTI
Trigger: GATCGTAGGACTCCTGGCTCAACTGGAGAAGATCAA...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATTTGATCTTCTCCAGTTaGGCCAGGAGTCCTACGATC +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNLIFSS*ARSPTI
Trigger: GATCGTAGGACTCCTGGCTCAACTGGAGAAGATCAA...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTTGATCTTCTCCAGTTaGGCCAGGAGTCCTACGATC +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSLIFSS*ARSPTI
Trigger: GATCGTAGGACTCCTGGCTCAACTGGAGAAGATCAA...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGTCAGACTGGAGGTATTaGCAAGAGGATCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKSDWRY*QEDPES
Trigger: GGACTCTGGATCCTCTTGTCAATACCTCCAGTCTGA...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR TCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTCAGACTGGAGGTATTaGCAAGAGGATCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSSDWRY*QEDPES
Trigger: GGACTCTGGATCCTCTTGTCAATACCTCCAGTCTGA...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR TCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATGATTCTCGTAAGCTCTaGGCAGTGGGGTTATTGCTC +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNDSRKL*AVGLLL
Trigger: GAGCAATAACCCCACTGCTCAGAGCTTACGAGAATC...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTGATTCTCGTAAGCTCTaGGCAGTGGGGTTATTGCTC +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSDSRKL*AVGLLL
Trigger: GAGCAATAACCCCACTGCTCAGAGCTTACGAGAATC...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTACTGCAGCCAAGTATTaGAACAGCCCCTTAGCATGG +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSTAAKY*NSPLAW
Trigger: CCATGCTAAGGGGCTGTTGCAATACTTGGCTGCAGT...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGACTGCAGCCAAGTATTaGAACAGCCCCTTAGCATGG +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKTAAKY*NSPLAW
Trigger: CCATGCTAAGGGGCTGTTGCAATACTTGGCTGCAGT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGCTACGAAGCTACAGCTaGTCATGCAAAATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKLRSYS*SCKMLG
Trigger: CCCCAGCATTTTGCATGAGCAGCTGTAGCTTCGTAG...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATCTACGAAGCTACAGCTaGTCATGCAAAATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNLRSYS*SCKMLG
Trigger: CCCCAGCATTTTGCATGAGCAGCTGTAGCTTCGTAG...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATCCTGTAAGCAACACCTaGTCGCATTCCACTGACTTC +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNPVSNT*SHSTDF
Trigger: GAAGTCAGTGGAATGCGACCAGGTGTTGCTTACAGG...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGCCTGTAAGCAACACCTaGTCGCATTCCACTGACTTC +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKPVSNT*SHSTDF
Trigger: GAAGTCAGTGGAATGCGACCAGGTGTTGCTTACAGG...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTGCAGTTAACAAGAGATaGCAGCGGGCTCAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIAVNKR*QRAQGR
Trigger: CCTACCTTGAGCCCGCTGCCATCTCTTGTTAACTGC...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATTCGACCTCCACCAGCTaGCACCAGCTCAACAAGAAT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNSTSTS*HQLNKN
Trigger: ATTCTTGTTGAGCTGGTGTCAGCTGGTGGAGGTCGA...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGAGGATCCAGAGTCCTaGCTGCCAGACATTCTTGCG +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNEDPES*LPDILA
Trigger: CGCAAGAATGTCTGGCAGTCAGGACTCTGGATCCTC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR TCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTGGGATAAGCCACCTCTaGATATTCTGGGACAGACTT +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSGISHL*IFWDRL
Trigger: AAGTCTGTCCCAGAATATTCAGAGGTGGCTTATCCC...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATATGAGCATGTTTCTATaGCGGTTATCATGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNMSMFL*RLSWRC
Trigger: GCACCGCCATGATAACCGGCATAGAAACATGCTCAT...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGATCCAGAGTCCTGACTaGCAGACATTCTTGCGAAGT +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILIQSPD*QTFLRS
Trigger: ACTTCGCAAGAATGTCTGGCAGTCAGGACTCTGGAT...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR GCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGAGATGTTTCCTCGCCTaGCGTAGGAACAACAATAGG +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKRCFLA*RRNNNR
Trigger: CCTATTGTTGTTCCTACGGCAGGCGAGGAAACATCT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTAGATGTTTCCTCGCCTaGCGTAGGAACAACAATAGG +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSRCFLA*RRNNNR
Trigger: CCTATTGTTGTTCCTACGGCAGGCGAGGAAACATCT...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAGCCATGTGTGGACATaGTTTAGCACAGGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILSHVWT*FSTGKD
Trigger: GTCCTTACCTGTGCTAAAGCATGTCCACACATGGCT...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGAGCCATGTGTGGACATaGTTTAGCACAGGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKSHVWT*FSTGKD
Trigger: GTCCTTACCTGTGCTAAAGCATGTCCACACATGGCT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGCAGTTTCAACTCCAGTaGAGCAAAGCTTCCCTAGCT +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILQFQLQ*SKASLA
Trigger: AGCTAGGGAAGCTTTGCTGCACTGGAGTTGAAACTG...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATTCCGGACTTGGACTTTaGCACTGCCTATTCAAATCC +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNSGLGL*HCLFKS
Trigger: GGATTTGAATAGGCAGTGGCAAAGTCCAAGTCCGGA...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTCCGGACTTGGACTTTaGCACTGCCTATTCAAATCC +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSSGLGL*HCLFKS
Trigger: GGATTTGAATAGGCAGTGGCAAAGTCCAAGTCCGGA...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTACTGCAGCCAAGTATTaGAACAGCCCCTTAGCATGG +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMITAAKY*NSPLAW
Trigger: CCATGCTAAGGGGCTGTTGCAATACTTGGCTGCAGT...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATGCTGCTCATGCAAAATaGTGGGGCGATATGGCTCAG +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNAAHAK*WGDMAQ
Trigger: CTGAGCCATATCGCCCCAGCATTTTGCATGAGCAGC...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATTGGGTCATGGAGTGTTaGTCCATCAGGTACTTCAAC +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNWVMEC*SIRYFN
Trigger: GTTGAAGTACCTGATGGACCAACACTCCATGACCCA...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATCTCAATATAGAGGTCTaGGTCATGGAGTGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNLNIEV*VMECWS
Trigger: GGACCAACACTCCATGACCCAGACCTCTATATTGAG...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTCTCAATATAGAGGTCTaGGTCATGGAGTGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSLNIEV*VMECWS
Trigger: GGACCAACACTCCATGACCCAGACCTCTATATTGAG...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACTCGACCTCCACCAGCTaGCACCAGCTCAACAAGAAT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNSTSTS*HQLNKN
Trigger: ATTCTTGTTGAGCTGGTGTCAGCTGGTGGAGGTCGA...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGGTGAACCACCTTTGGTaGCTAAGAAACTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKVNHLW*LRNSLF
Trigger: GAAGAGTGAGTTTCTTAGTCACCAAAGGTGGTTCAC...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGGTGAACCACCTTTGGTaGCTAAGAAACTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILVNHLW*LRNSLF
Trigger: GAAGAGTGAGTTTCTTAGTCACCAAAGGTGGTTCAC...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGGGTAGAACCAAGCGATaGTTCTGCAAATTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKGRTKR*FCKFCL
Trigger: CAAGCAGAATTTGCAGAATCATCGCTTGGTTCTACC...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTGGTAGAACCAAGCGATaGTTCTGCAAATTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSGRTKR*FCKFCL
Trigger: CAAGCAGAATTTGCAGAATCATCGCTTGGTTCTACC...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATGGTAGAACCAAGCGATaGTTCTGCAAATTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNGRTKR*FCKFCL
Trigger: CAAGCAGAATTTGCAGAATCATCGCTTGGTTCTACC...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGCTGGTCGCATTCCACTaGCTTCAAAGTAAAACCACT +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKLVAFH*LQSKTT
Trigger: AGTGGTTTTACTTTGAAGTCAGTGGAATGCGACCAG...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTCTGGTCGCATTCCACTaGCTTCAAAGTAAAACCACT +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSLVAFH*LQSKTT
Trigger: AGTGGTTTTACTTTGAAGTCAGTGGAATGCGACCAG...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATGATTCTCGTAAGCTCTaGGCAGTGGGGTTATTGCTC +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNDSRKL*AVGLLL
Trigger: GAGCAATAACCCCACTGCTCAGAGCTTACGAGAATC...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTGTTCGTCCCGGTTCTTaGTGGGGTTTTAGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSVRPGS*WGFSLL
Trigger: TAACAAACTAAAACCCCAGCAAGAACCGGGACGAAC...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGGTCCTTCTTCATTTCTaGAGTAAAACCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILVLLHF*SKTWGC
Trigger: ACAGCCCCAGGTTTTACTGCAGAAATGAAGAAGGAC...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGGTCCTTCTTCATTTCTaGAGTAAAACCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKVLLHF*SKTWGC
Trigger: ACAGCCCCAGGTTTTACTGCAGAAATGAAGAAGGAC...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTCTTGGACTTTGCCACTaGCTATTCAAATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSLGLCH*LFKSSP
Trigger: TGGAGAGGATTTGAATAGGCAGTGGCAAAGTCCAAG...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGCTTGGACTTTGCCACTaGCTATTCAAATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKLGLCH*LFKSSP
Trigger: TGGAGAGGATTTGAATAGGCAGTGGCAAAGTCCAAG...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATACTGCAGCCAAGTATTaGAACAGCCCCTTAGCATGG +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNTAAKY*NSPLAW
Trigger: CCATGCTAAGGGGCTGTTGCAATACTTGGCTGCAGT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCTACGAAGCTACAGCTaGTCATGCAAAATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNLRSYS*SCKMLG
Trigger: CCCCAGCATTTTGCATGAGCAGCTGTAGCTTCGTAG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATACAAGTAGCCATGTGTaGACATGCTTTAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNTSSHV*TCFSTG
Trigger: ACCTGTGCTAAAGCATGTCCACACATGGCTACTTGT...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGACAAGTAGCCATGTGTaGACATGCTTTAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKTSSHV*TCFSTG
Trigger: ACCTGTGCTAAAGCATGTCCACACATGGCTACTTGT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTTGGGTCATGGAGTGTTaGTCCATCAGGTACTTCAAC +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIWVMEC*SIRYFN
Trigger: GTTGAAGTACCTGATGGACCAACACTCCATGACCCA...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTCAATATAGAGGTCTaGGTCATGGAGTGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMILNIEV*VMECWS
Trigger: GGACCAACACTCCATGACCCAGACCTCTATATTGAG...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCCTGTAAGCAACACCTaGTCGCATTCCACTGACTTC +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNPVSNT*SHSTDF
Trigger: GAAGTCAGTGGAATGCGACCAGGTGTTGCTTACAGG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTAATGCTGGGGCGATATaGCTCAGTATCTTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSNAGAI*LSILGN
Trigger: ATTGCCTAAGATACTGAGCCATATCGCCCCAGCATT...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTGCTCATGCAAAATGCTaGGGCGATATGGCTCAGTAT +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIAHAKC*GDMAQY
Trigger: ATACTGAGCCATATCGCCCCAGCATTTTGCATGAGC...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATCAAAGTCAAGCAGGCTaGAAGGCAGATTATACTCCA +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNQSQAG*KADYTP
Trigger: TGGAGTATAATCTGCCTTCCAGCCTGCTTGACTTTG...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGCAGTTAACAAGAGATaGCAGCGGGCTCAAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNAVNKR*QRAQGR
Trigger: CCTACCTTGAGCCCGCTGCCATCTCTTGTTAACTGC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGTTTCAAGGCAAACCCTaGACTACTTCAGTCACAACC +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKFQGKP*TTSVTT
Trigger: GGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAA...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTTTCAAGGCAAACCCTaGACTACTTCAGTCACAACC +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSFQGKP*TTSVTT
Trigger: GGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAA...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACTTGATCTTCTCCAGTTaGGCCAGGAGTCCTACGATC +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNLIFSS*ARSPTI
Trigger: GATCGTAGGACTCCTGGCTCAACTGGAGAAGATCAA...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGTATACTCGTAAAAGCTaGAGGCAAGGTAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILYTRKS*RQGRTK
Trigger: CTTGGTTCTACCTTGCCTTCAGCTTTTACGAGTATA...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGAAATTCCTTTCCGAATaGGCATGTTTCTATGCCGGT +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKKFLSE*ACFYAG
Trigger: ACCGGCATAGAAACATGCTCATTCGGAAAGGAATTT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAAATTCCTTTCCGAATaGGCATGTTTCTATGCCGGT +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNKFLSE*ACFYAG
Trigger: ACCGGCATAGAAACATGCTCATTCGGAAAGGAATTT...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATGGGATAAGCCACCTCTaGATATTCTGGGACAGACTT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNGISHL*IFWDRL
Trigger: AAGTCTGTCCCAGAATATTCAGAGGTGGCTTATCCC...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATCCTGAACCGAATACATaGGTGGTTGCATACCATAAT +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNPEPNT*VVAYHN
Trigger: ATTATGGTATGCAACCACTCATGTATTCGGTTCAGG...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGGCATTTAATGCTTCCTaGACCGAATACATGAGTGGT +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILAFNAS*TEYMSG
Trigger: ACCACTCATGTATTCGGTTCAGGAAGCATTAAATGC...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGCGTAAGGGCGATTTCTaGAATGGCAGATATGTTCAT +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKRKGDF*NGRYVH
Trigger: ATGAACATATCTGCCATTTCAGAAATCGCCCTTACG...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTGGGGTTATTGCTCATaGGATATTCCAACGTTCCTT +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSWGYCS*DIPTFL
Trigger: AAGGAACGTTGGAATATCTCATGAGCAATAACCCCA...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGTGGGGTTATTGCTCATaGGATATTCCAACGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILWGYCS*DIPTFL
Trigger: AAGGAACGTTGGAATATCTCATGAGCAATAACCCCA...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGATTCTCGTAAGCTCTaGGCAGTGGGGTTATTGCTC +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNDSRKL*AVGLLL
Trigger: GAGCAATAACCCCACTGCTCAGAGCTTACGAGAATC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGCCCTTGTATTTTCCCTaGTCACAGCCACATAAAGTA +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILPLYFP*SQPHKV
Trigger: TACTTTATGTGGCTGTGATCAGGGAAAATACAAGGG...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATATGAGCATGTTTCTATaGCGGTTATCATGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNMSMFL*RLSWRC
Trigger: GCACCGCCATGATAACCGGCATAGAAACATGCTCAT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTGTTCGTCCCGGTTCTTaGTGGGGTTTTAGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIVRPGS*WGFSLL
Trigger: TAACAAACTAAAACCCCAGCAAGAACCGGGACGAAC...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAGATGTTTCCTCGCCTaGCGTAGGAACAACAATAGG +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNRCFLA*RRNNNR
Trigger: CCTATTGTTGTTCCTACGGCAGGCGAGGAAACATCT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAGCCATGTGTGGACATaGTTTAGCACAGGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNSHVWT*FSTGKD
Trigger: GTCCTTACCTGTGCTAAAGCATGTCCACACATGGCT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCAGTTTCAACTCCAGTaGAGCAAAGCTTCCCTAGCT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNQFQLQ*SKASLA
Trigger: AGCTAGGGAAGCTTTGCTGCACTGGAGTTGAAACTG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATATTAGACTCTGGCATTaGTGTTATAGTCACCAAGGG +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNIRLWH*CYSHQG
Trigger: CCCTTGGTGACTATAACAGCAATGCCAGAGTCTAAT...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATTCCGGACTTGGACTTTaGCACTGCCTATTCAAATCC +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNSGLGL*HCLFKS
Trigger: GGATTTGAATAGGCAGTGGCAAAGTCCAAGTCCGGA...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCTACGAAGCTACAGCTaGTCATGCAAAATGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNLRSYS*SCKMLG
Trigger: CCCCAGCATTTTGCATGAGCAGCTGTAGCTTCGTAG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGCGTCCCGGTTCTTGCTaGGGTTTTAGTTTGTTAATA +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKRPGSC*GFSLLI
Trigger: TATTAACAAACTAAAACCCCAGCAAGAACCGGGACG...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGTTCTGCAGTAAAACCTaGGGCTGTTTGAGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILFCSKT*GCLRRN
Trigger: ATTCCTTCTCAAACAGCCCCAGGTTTTACTGCAGAA...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGTTCTGCAGTAAAACCTaGGGCTGTTTGAGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKFCSKT*GCLRRN
Trigger: ATTCCTTCTCAAACAGCCCCAGGTTTTACTGCAGAA...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATTGGGTCATGGAGTGTTaGTCCATCAGGTACTTCAAC +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNWVMEC*SIRYFN
Trigger: GTTGAAGTACCTGATGGACCAACACTCCATGACCCA...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGAATAGGCTCTTTGAATaGAGGCGGAATGTGACCAAA +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKNRLFE*RRNVTK
Trigger: TTTGGTCACATTCCGCCTCCATTCAAAGAGCCTATT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAATAGGCTCTTTGAATaGAGGCGGAATGTGACCAAA +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNNRLFE*RRNVTK
Trigger: TTTGGTCACATTCCGCCTCCATTCAAAGAGCCTATT...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGCTCCCTCTTCTGGAATaGTGTAATTTGGGTTATCCA +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILLPLLE*CNLGYP
Trigger: TGGATAACCCAAATTACACCATTCCAGAAGAGGGAG...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGGAATCCACCATGGTCTaGCATTTAATGCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKESTMV*HLMLPE
Trigger: TTCAGGAAGCATTAAATGCCAGACCATGGTGGATTC...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATGCTCATGCAAAATGCTaGGGCGATATGGCTCAGTAT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNAHAKC*GDMAQY
Trigger: ATACTGAGCCATATCGCCCCAGCATTTTGCATGAGC...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATGAAATAGTTCTATTTTaGTCACCTGGCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNEIVLF*SPGCCC
Trigger: ACAACAGCAGCCAGGTGATCAAAATAGAACTATTTC...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGGAAATAGTTCTATTTTaGTCACCTGGCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKEIVLF*SPGCCC
Trigger: ACAACAGCAGCCAGGTGATCAAAATAGAACTATTTC...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCTGGTCGCATTCCACTaGCTTCAAAGTAAAACCACT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNLVAFH*LQSKTT
Trigger: AGTGGTTTTACTTTGAAGTCAGTGGAATGCGACCAG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATCTGAGGATTGTGTGCTaGTTCCAATTTTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNLRIVC*FQFLKM
Trigger: CATCTTCAAAAATTGGAATCAGCACACAATCCTCAG...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTCTGAGGATTGTGTGCTaGTTCCAATTTTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSLRIVC*FQFLKM
Trigger: CATCTTCAAAAATTGGAATCAGCACACAATCCTCAG...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCGTAAGGGCGATTTCTaGAATGGCAGATATGTTCAT +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIRKGDF*NGRYVH
Trigger: ATGAACATATCTGCCATTTCAGAAATCGCCCTTACG...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGCTTAAAGAACAGCGATaGTTTCCATTGATGACACCA +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKLKEQR*FPLMTP
Trigger: TGGTGTCATCAATGGAAATCATCGCTGTTCTTTAAG...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGCTTAAAGAACAGCGATaGTTTCCATTGATGACACCA +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILLKEQR*FPLMTP
Trigger: TGGTGTCATCAATGGAAATCATCGCTGTTCTTTAAG...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCCCTTGTATTTTCCCTaGTCACAGCCACATAAAGTA +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIPLYFP*SQPHKV
Trigger: TACTTTATGTGGCTGTGATCAGGGAAAATACAAGGG...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACATGAGCATGTTTCTATaGCGGTTATCATGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNMSMFL*RLSWRC
Trigger: GCACCGCCATGATAACCGGCATAGAAACATGCTCAT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACATCCAGAGTCCTGACTaGCAGACATTCTTGCGAAGT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNIQSPD*QTFLRS
Trigger: ACTTCGCAAGAATGTCTGGCAGTCAGGACTCTGGAT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR GCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACAGATGTTTCCTCGCCTaGCGTAGGAACAACAATAGG +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNRCFLA*RRNNNR
Trigger: CCTATTGTTGTTCCTACGGCAGGCGAGGAAACATCT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATGTCCTTCTTCATTTCTaGAGTAAAACCTGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNVLLHF*SKTWGC
Trigger: ACAGCCCCAGGTTTTACTGCAGAAATGAAGAAGGAC...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACAGCCATGTGTGGACATaGTTTAGCACAGGTAAGGAC +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNSHVWT*FSTGKD
Trigger: GTCCTTACCTGTGCTAAAGCATGTCCACACATGGCT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTATTAGACTCTGGCATTaGTGTTATAGTCACCAAGGG +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIIRLWH*CYSHQG
Trigger: CCCTTGGTGACTATAACAGCAATGCCAGAGTCTAAT...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCTTGGACTTTGCCACTaGCTATTCAAATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNLGLCH*LFKSSP
Trigger: TGGAGAGGATTTGAATAGGCAGTGGCAAAGTCCAAG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTACCAACACAAAATTTTaGTCCCATCTCTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSTNTKF*SHLFQF
Trigger: GAACTGGAAGAGATGGGAGCAAAATTTTGTGTTGGT...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCGTCCCGGTTCTTGCTaGGGTTTTAGTTTGTTAATA +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIRPGSC*GFSLLI
Trigger: TATTAACAAACTAAAACCCCAGCAAGAACCGGGACG...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCTCAATATAGAGGTCTaGGTCATGGAGTGTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNLNIEV*VMECWS
Trigger: GGACCAACACTCCATGACCCAGACCTCTATATTGAG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTGAATCCACCATGGTCTaGCATTTAATGCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIESTMV*HLMLPE
Trigger: TTCAGGAAGCATTAAATGCCAGACCATGGTGGATTC...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAATGCTGGGGCGATATaGCTCAGTATCTTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNNAGAI*LSILGN
Trigger: ATTGCCTAAGATACTGAGCCATATCGCCCCAGCATT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGCTCATGCAAAATGCTaGGGCGATATGGCTCAGTAT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNAHAKC*GDMAQY
Trigger: ATACTGAGCCATATCGCCCCAGCATTTTGCATGAGC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCAAAGTCAAGCAGGCTaGAAGGCAGATTATACTCCA +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNQSQAG*KADYTP
Trigger: TGGAGTATAATCTGCCTTCCAGCCTGCTTGACTTTG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATCAGATGAAGAATTTTTaGTGTAACATATCGGGCAGT +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNQMKNF*CNISGS
Trigger: ACTGCCCGATATGTTACATCAAAAATTCTTCATCTG...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGTGAACCACCTTTGGTaGCTAAGAAACTCACTCTTC +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNVNHLW*LRNSLF
Trigger: GAAGAGTGAGTTTCTTAGTCACCAAAGGTGGTTCAC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGTCTGCAAATTCTGCTTaGCCAAATTCAGGGTTATAT +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKSANSA*PNSGLY
Trigger: ATATAACCCTGAATTTGGTCAAGCAGAATTTGCAGA...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGGTAGAACCAAGCGATaGTTCTGCAAATTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNGRTKR*FCKFCL
Trigger: CAAGCAGAATTTGCAGAATCATCGCTTGGTTCTACC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATTATACTCGTAAAAGCTaGAGGCAAGGTAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNYTRKS*RQGRTK
Trigger: CTTGGTTCTACCTTGCCTTCAGCTTTTACGAGTATA...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAATTCCTTTCCGAATaGGCATGTTTCTATGCCGGT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNKFLSE*ACFYAG
Trigger: ACCGGCATAGAAACATGCTCATTCGGAAAGGAATTT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCTGGTCGCATTCCACTaGCTTCAAAGTAAAACCACT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNLVAFH*LQSKTT
Trigger: AGTGGTTTTACTTTGAAGTCAGTGGAATGCGACCAG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCCTGAACCGAATACATaGGTGGTTGCATACCATAAT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNPEPNT*VVAYHN
Trigger: ATTATGGTATGCAACCACTCATGTATTCGGTTCAGG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATGCATTTAATGCTTCCTaGACCGAATACATGAGTGGT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNAFNAS*TEYMSG
Trigger: ACCACTCATGTATTCGGTTCAGGAAGCATTAAATGC...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCGTAAGGGCGATTTCTaGAATGGCAGATATGTTCAT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNRKGDF*NGRYVH
Trigger: ATGAACATATCTGCCATTTCAGAAATCGCCCTTACG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATTGGGGTTATTGCTCATaGGATATTCCAACGTTCCTT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNWGYCS*DIPTFL
Trigger: AAGGAACGTTGGAATATCTCATGAGCAATAACCCCA...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTTAAAGAACAGCGATaGTTTCCATTGATGACACCA +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMILKEQR*FPLMTP
Trigger: TGGTGTCATCAATGGAAATCATCGCTGTTCTTTAAG...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCCCTTGTATTTTCCCTaGTCACAGCCACATAAAGTA +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNPLYFP*SQPHKV
Trigger: TACTTTATGTGGCTGTGATCAGGGAAAATACAAGGG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGTTCGTCCCGGTTCTTaGTGGGGTTTTAGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNVRPGS*WGFSLL
Trigger: TAACAAACTAAAACCCCAGCAAGAACCGGGACGAAC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATATTAGACTCTGGCATTaGTGTTATAGTCACCAAGGG +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNIRLWH*CYSHQG
Trigger: CCCTTGGTGACTATAACAGCAATGCCAGAGTCTAAT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCTTGGACTTTGCCACTaGCTATTCAAATCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNLGLCH*LFKSSP
Trigger: TGGAGAGGATTTGAATAGGCAGTGGCAAAGTCCAAG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTCCAAACTACAACACGTaGTGTGGATTCTTTAGATTT +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSPNYNT*CGFFRF
Trigger: AAATCTAAAGAATCCACAGCACGTGTTGTAGTTTGG...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATTTCTGCAGTAAAACCTaGGGCTGTTTGAGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNFCSKT*GCLRRN
Trigger: ATTCCTTCTCAAACAGCCCCAGGTTTTACTGCAGAA...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACACAAGTAGCCATGTGTaGACATGCTTTAGCACAGGT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNTSSHV*TCFSTG
Trigger: ACCTGTGCTAAAGCATGTCCACACATGGCTACTTGT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAATAGGCTCTTTGAATaGAGGCGGAATGTGACCAAA +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNNRLFE*RRNVTK
Trigger: TTTGGTCACATTCCGCCTCCATTCAAAGAGCCTATT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCTCCCTCTTCTGGAATaGTGTAATTTGGGTTATCCA +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNLPLLE*CNLGYP
Trigger: TGGATAACCCAAATTACACCATTCCAGAAGAGGGAG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTAATATCTCCCTCTTCTaGAATGGTGTAATTTGGGTT +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSNISLF*NGVIWV
Trigger: AACCCAAATTACACCATTCCAGAAGAGGGAGATATT...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAATATCTCCCTCTTCTaGAATGGTGTAATTTGGGTT +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILNISLF*NGVIWV
Trigger: AACCCAAATTACACCATTCCAGAAGAGGGAGATATT...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAATATCTCCCTCTTCTaGAATGGTGTAATTTGGGTT +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNNISLF*NGVIWV
Trigger: AACCCAAATTACACCATTCCAGAAGAGGGAGATATT...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTAAGTTGCATTATCATTaGTATGCCACACTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSKLHYH*YATLSL
Trigger: AAGAGACAGTGTGGCATACCAATGATAATGCAACTT...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAAGTTGCATTATCATTaGTATGCCACACTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNKLHYH*YATLSL
Trigger: AAGAGACAGTGTGGCATACCAATGATAATGCAACTT...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACAATGCTGGGGCGATATaGCTCAGTATCTTAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNNAGAI*LSILGN
Trigger: ATTGCCTAAGATACTGAGCCATATCGCCCCAGCATT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACTTTCAAGGCAAACCCTaGACTACTTCAGTCACAACC +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNFQGKP*TTSVTT
Trigger: GGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAA...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATGAAATAGTTCTATTTTaGTCACCTGGCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNEIVLF*SPGCCC
Trigger: ACAACAGCAGCCAGGTGATCAAAATAGAACTATTTC...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGCATTTAATGCTTCCTaGACCGAATACATGAGTGGT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNAFNAS*TEYMSG
Trigger: ACCACTCATGTATTCGGTTCAGGAAGCATTAAATGC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCGTAAGGGCGATTTCTaGAATGGCAGATATGTTCAT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNRKGDF*NGRYVH
Trigger: ATGAACATATCTGCCATTTCAGAAATCGCCCTTACG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCTTAAAGAACAGCGATaGTTTCCATTGATGACACCA +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNLKEQR*FPLMTP
Trigger: TGGTGTCATCAATGGAAATCATCGCTGTTCTTTAAG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCCCTTGTATTTTCCCTaGTCACAGCCACATAAAGTA +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNPLYFP*SQPHKV
Trigger: TACTTTATGTGGCTGTGATCAGGGAAAATACAAGGG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGACTGCCAGACATTCTTaGGAAGTATTATACAGAATT +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKTARHS*EVLYRI
Trigger: AATTCTGTATAATACTTCGCAAGAATGTCTGGCAGT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR GCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCCAAACTACAACACGTaGTGTGGATTCTTTAGATTT +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIPNYNT*CGFFRF
Trigger: AAATCTAAAGAATCCACAGCACGTGTTGTAGTTTGG...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATACCAACACAAAATTTTaGTCCCATCTCTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNTNTKF*SHLFQF
Trigger: GAACTGGAAGAGATGGGAGCAAAATTTTGTGTTGGT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATCTCATCATTACTTTCTaGACTGTAATCAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNLIITF*TVINFF
Trigger: GAAGAAGTTGATTACAGTGCAGAAAGTAATGATGAG...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGCTCATCATTACTTTCTaGACTGTAATCAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILLIITF*TVINFF
Trigger: GAAGAAGTTGATTACAGTGCAGAAAGTAATGATGAG...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGAAGAACAGTCTTATCTaGAATATCTACCCACTTCTA +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKKNSLI*NIYPLL
Trigger: TAGAAGTGGGTAGATATTGCAGATAAGACTGTTCTT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTCTGAATTCACAGAGTTaGCAGAATATACTCGTAAAA +
Preference number: 4 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSLNSQS*QNILVK
Trigger: TTTTACGAGTATATTCTGCCAACTCTGTGAATTCAG...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGAGAACTTTTAATTGTTaGGAGTGGCAGTCGATTTTT +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKRTFNC*EWQSIF
Trigger: AAAAATCGACTGCCACTCCCAACAATTAAAAGTTCT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR CCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCGTCCCGGTTCTTGCTaGGGTTTTAGTTTGTTAATA +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNRPGSC*GFSLLI
Trigger: TATTAACAAACTAAAACCCCAGCAAGAACCGGGACG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAAGGCTTTGGTTCTTTaGAGATTAAATCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: VECNGFKANPGLLQSQPNKALVL*RLNHSP
Trigger: AGGACTATGATTTAATCTCCAAAGAACCAAAGCCTT...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGAAGGCTTTGGTTCTTTaGAGATTAAATCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKKALVL*RLNHSP
Trigger: AGGACTATGATTTAATCTCCAAAGAACCAAAGCCTT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACTTCTGCAGTAAAACCTaGGGCTGTTTGAGAAGGAAT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNFCSKT*GCLRRN
Trigger: ATTCCTTCTCAAACAGCCCCAGGTTTTACTGCAGAA...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGTGGAATGGTGTAATTTaGGTTATCCAAGTCATATAC +
Preference number: 4 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKWNGVI*VIQVIY
Trigger: GTATATGACTTGGATAACCCAAATTACACCATTCCA...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCTCCCTCTTCTGGAATaGTGTAATTTGGGTTATCCA +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNLPLLE*CNLGYP
Trigger: TGGATAACCCAAATTACACCATTCCAGAAGAGGGAG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGAATCCACCATGGTCTaGCATTTAATGCTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNESTMV*HLMLPE
Trigger: TTCAGGAAGCATTAAATGCCAGACCATGGTGGATTC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTAAGTTGCATTATCATTaGTATGCCACACTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIKLHYH*YATLSL
Trigger: AAGAGACAGTGTGGCATACCAATGATAATGCAACTT...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGAAATAGTTCTATTTTaGTCACCTGGCTGCTGTTGT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNEIVLF*SPGCCC
Trigger: ACAACAGCAGCCAGGTGATCAAAATAGAACTATTTC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCTGAGGATTGTGTGCTaGTTCCAATTTTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNLRIVC*FQFLKM
Trigger: CATCTTCAAAAATTGGAATCAGCACACAATCCTCAG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTACTGCCAGACATTCTTaGGAAGTATTATACAGAATT +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMITARHS*EVLYRI
Trigger: AATTCTGTATAATACTTCGCAAGAATGTCTGGCAGT...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR GCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACACCAACACAAAATTTTaGTCCCATCTCTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNTNTKF*SHLFQF
Trigger: GAACTGGAAGAGATGGGAGCAAAATTTTGTGTTGGT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTCATCATTACTTTCTaGACTGTAATCAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMILIITF*TVINFF
Trigger: GAAGAAGTTGATTACAGTGCAGAAAGTAATGATGAG...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR GCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTAAGAACAGTCTTATCTaGAATATCTACCCACTTCTA +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIKNSLI*NIYPLL
Trigger: TAGAAGTGGGTAGATATTGCAGATAAGACTGTTCTT...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTTGGAATGGTGTAATTTaGGTTATCCAAGTCATATAC +
Preference number: 4 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIWNGVI*VIQVIY
Trigger: GTATATGACTTGGATAACCCAAATTACACCATTCCA...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAATATCTCCCTCTTCTaGAATGGTGTAATTTGGGTT +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNNISLF*NGVIWV
Trigger: AACCCAAATTACACCATTCCAGAAGAGGGAGATATT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACTCTGCAAATTCTGCTTaGCCAAATTCAGGGTTATAT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNSANSA*PNSGLY
Trigger: ATATAACCCTGAATTTGGTCAAGCAGAATTTGCAGA...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR TCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACACACATTTATTATCTTaGAACCAAACTGGCCCAAGT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNTHLLS*NQTGPS
Trigger: ACTTGGGCCAGTTTGGTTTCAAGATAATAAATGTGT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCCAAACTACAACACGTaGTGTGGATTCTTTAGATTT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNPNYNT*CGFFRF
Trigger: AAATCTAAAGAATCCACAGCACGTGTTGTAGTTTGG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATTGGAATGGTGTAATTTaGGTTATCCAAGTCATATAC +
Preference number: 4 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNWNGVI*VIQVIY
Trigger: GTATATGACTTGGATAACCCAAATTACACCATTCCA...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACAAGTTGCATTATCATTaGTATGCCACACTGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNKLHYH*YATLSL
Trigger: AAGAGACAGTGTGGCATACCAATGATAATGCAACTT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR GCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCTCATCATTACTTTCTaGACTGTAATCAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNLIITF*TVINFF
Trigger: GAAGAAGTTGATTACAGTGCAGAAAGTAATGATGAG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACAGAACTTTTAATTGTTaGGAGTGGCAGTCGATTTTT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNRTFNC*EWQSIF
Trigger: AAAAATCGACTGCCACTCCCAACAATTAAAAGTTCT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR CCA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACAAGGCTTTGGTTCTTTaGAGATTAAATCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNKALVL*RLNHSP
Trigger: AGGACTATGATTTAATCTCCAAAGAACCAAAGCCTT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTCGCCCACCGCACGCCTaGCCAGCCGGCTCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSRPPHA*PAGSQH
Trigger: GTGCTGGGAGCCGGCTGGCAAGGCGTGCGGTGGGCG...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337006.8
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCGCCCACCGCACGCCTaGCCAGCCGGCTCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNRPPHA*PAGSQH
Trigger: GTGCTGGGAGCCGGCTGGCAAGGCGTGCGGTGGGCG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000628899.1
CDS-3UTR CAA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATCACTGCAGCCAAGTATaGCAACAGCCCCTTAGCATG +
Preference number: 5 (lower is better)
Translates to: VECNGFKANPGLLQSQPNHCSQV*QQPLSM
Trigger: CATGCTAAGGGGCTGTTGCAATACTTGGCTGCAGTG...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTCACTGCAGCCAAGTATaGCAACAGCCCCTTAGCATG +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSHCSQV*QQPLSM
Trigger: CATGCTAAGGGGCTGTTGCAATACTTGGCTGCAGTG...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS GCA 90 bp TCTTCCCTCAAACAGAACATTTCCACAAGTAGCCATGTGTGGACATaGTTTAGCACAGGTAAGGACAGTAAGAGGAAGACTGCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: SSLKQNISTSSHVWT*FSTGKDSKRKTAVL
Trigger: AAGGACTGCAGTCTTCCTCTTACTGTCCTTACCTGTGCTAAAGCATGTCCACACATGGCTACTTGTGGAAATGTTCTGTTTGAGGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATCTGGGTCATGGAGTGTaGGTCCATCAGGTACTTCAA +
Preference number: 5 (lower is better)
Translates to: VECNGFKANPGLLQSQPNLGHGV*VHQVLQ
Trigger: TTGAAGTACCTGATGGACCAACACTCCATGACCCAG...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTCTGGGTCATGGAGTGTaGGTCCATCAGGTACTTCAA +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSLGHGV*VHQVLQ
Trigger: TTGAAGTACCTGATGGACCAACACTCCATGACCCAG...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGACGATCCTAGAATTATaGGTAAGGCGGCTCAGGATG +
Preference number: 5 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILTILEL*VRRLRM
Trigger: CATCCTGAGCCGCCTTACCAATAATTCTAGGATCGT...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337006.8
CDS-3UTR CAA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGATTGATCTTCTCCAGTaGAGCCAGGAGTCCTACGAT +
Preference number: 5 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILIDLLQ*SQESYD
Trigger: ATCGTAGGACTCCTGGCTCAACTGGAGAAGATCAAT...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTATCAGACTGGAGGTATaGACAAGAGGATCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSIRLEV*TRGSRV
Trigger: GACTCTGGATCCTCTTGTCAATACCTCCAGTCTGAT...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR CAA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGATCCGGACTTGGACTTaGCCACTGCCTATTCAAATC +
Preference number: 5 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKIRTWT*PLPIQI
Trigger: GATTTGAATAGGCAGTGGCAAAGTCCAAGTCCGGAT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGATCCGGACTTGGACTTaGCCACTGCCTATTCAAATC +
Preference number: 5 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILIRTWT*PLPIQI
Trigger: GATTTGAATAGGCAGTGGCAAAGTCCAAGTCCGGAT...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGGATGTAAATCCGGACTaGGACTTTGCCACTGCCTAT +
Preference number: 5 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILDVNPD*DFATAY
Trigger: ATAGGCAGTGGCAAAGTCCAAGTCCGGATTTACATC...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCACTGCAGCCAAGTATaGCAACAGCCCCTTAGCATG +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNHCSQV*QQPLSM
Trigger: CATGCTAAGGGGCTGTTGCAATACTTGGCTGCAGTG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS TCA 90 bp AGACTGCAGTCCTTCTTCATTTCTGCAGTAAAACCTGGGGCTGTTTaGGAAGGAATATTCTGCAATGTAATTCGGTCCAAGGCCTTTACA +
Preference number: 5 (lower is better)
Translates to: RLQSFFISAVKPGAV*EGIFCNVIRSKAFT
Trigger: TGTAAAGGCCTTGGACCGAATTACATTGCAGAATATTCCTTCTCAAACAGCCCCAGGTTTTACTGCAGAAATGAAGAAGGACTGCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGTGTGGGGGAGATTCTTaGCTGGCATTCATAAGTAAC +
Preference number: 5 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILCGGDS*LAFISN
Trigger: GTTACTTATGAATGCCAGCAAAGAATCTCCCCCACA...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTGTGGGGGAGATTCTTaGCTGGCATTCATAAGTAAC +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSCGGDS*LAFISN
Trigger: GTTACTTATGAATGCCAGCAAAGAATCTCCCCCACA...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCTGGGTCATGGAGTGTaGGTCCATCAGGTACTTCAA +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNLGHGV*VHQVLQ
Trigger: TTGAAGTACCTGATGGACCAACACTCCATGACCCAG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTGATGTAAATCCGGACTaGGACTTTGCCACTGCCTAT +
Preference number: 5 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIDVNPD*DFATAY
Trigger: ATAGGCAGTGGCAAAGTCCAAGTCCGGATTTACATC...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTGCCACACTGTCTCTTaGATGCTGCAACCATACATA +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSCHTVS*MLQPYI
Trigger: TATGTATGGTTGCAGCATCAAAGAGACAGTGTGGCA...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS TCA 90 bp AGTCATCAGAGCTTTCAGCAATTTCAAAGGATTGGAGGCAAAAACTaGAGTTCAGAGCTGCCAAGGTTCCTAGTTACTTTGCAGCTTGAT +
Preference number: 5 (lower is better)
Translates to: SHQSFQQFQRIGGKN*SSELPRFLVTLQLD
Trigger: ATCAAGCTGCAAAGTAACTAGGAACCTTGGCAGCTCTGAACTTCAGTTTTTGCCTCCAATCCTTTGAAATTGCTGAAAGCTCTGATGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489265.1
CDS-3UTR CAA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATATTCCTGTAGAACCTTaGGCTGTCATTTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: VECNGFKANPGLLQSQPNIPVEP*AVISLL
Trigger: AAGGAGAGAAATGACAGCCAAAGGTTCTACAGGAAT...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTATTCCTGTAGAACCTTaGGCTGTCATTTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSIPVEP*AVISLL
Trigger: AAGGAGAGAAATGACAGCCAAAGGTTCTACAGGAAT...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATATCAGACTGGAGGTATaGACAAGAGGATCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNIRLEV*TRGSRV
Trigger: GACTCTGGATCCTCTTGTCAATACCTCCAGTCTGAT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR CAA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGGTGGCAGTCGATTTTTaGGGAAACACTTCCTCATTA +
Preference number: 5 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILVAVDF*GNTSSL
Trigger: TAATGAGGAAGTGTTTCCCAAAAAATCGACTGCCAC...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTGTGGCAGTCGATTTTTaGGGAAACACTTCCTCATTA +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSVAVDF*GNTSSL
Trigger: TAATGAGGAAGTGTTTCCCAAAAAATCGACTGCCAC...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTAAAACCTGGGGCTGTTaGAGAAGGAATATTCTGCAA +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSKTWGC*RRNILQ
Trigger: TTGCAGAATATTCCTTCTCAAACAGCCCCAGGTTTT...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAAAACCTGGGGCTGTTaGAGAAGGAATATTCTGCAA +
Preference number: 5 (lower is better)
Translates to: VECNGFKANPGLLQSQPNKTWGC*RRNILQ
Trigger: TTGCAGAATATTCCTTCTCAAACAGCCCCAGGTTTT...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAAACCTGGGGCTGTTaGAGAAGGAATATTCTGCAA +
Preference number: 5 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILKTWGC*RRNILQ
Trigger: TTGCAGAATATTCCTTCTCAAACAGCCCCAGGTTTT...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATGATGTAAATCCGGACTaGGACTTTGCCACTGCCTAT +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNDVNPD*DFATAY
Trigger: ATAGGCAGTGGCAAAGTCCAAGTCCGGATTTACATC...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATGAAGTTGCATTATCATaGGTATGCCACACTGTCTCT +
Preference number: 5 (lower is better)
Translates to: VECNGFKANPGLLQSQPNEVALS*VCHTVS
Trigger: AGAGACAGTGTGGCATACCAATGATAATGCAACTTC...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTGACCAACACAAAATTTaGCTCCCATCTCTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSDQHKI*LPSLPV
Trigger: AACTGGAAGAGATGGGAGCAAAATTTTGTGTTGGTC...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATGACCAACACAAAATTTaGCTCCCATCTCTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: VECNGFKANPGLLQSQPNDQHKI*LPSLPV
Trigger: AACTGGAAGAGATGGGAGCAAAATTTTGTGTTGGTC...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS GCA 90 bp AAGTCCTCATGTGGGGGAGATTCTTTGCTGGCATTCATAAGTAACTaGAACAATATTTGTGAACCACCTTTGGTGACTAAGAAACTCACT +
Preference number: 5 (lower is better)
Translates to: KSSCGGDSLLAFISN*NNICEPPLVTKKLT
Trigger: AGTGAGTTTCTTAGTCACCAAAGGTGGTTCACAAATATTGTTGCAGTTACTTATGAATGCCAGCAAAGAATCTCCCCCACATGAGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376080.2
ENST00000376081.8
ENST00000376083.7
ENST00000491784.3
ENST00000628899.1
CDS GCA 90 bp GTTATTGCTCATGAGATATTCCAACGTTCCTTTCATAACCCAACTTaGATTAGTTTCTCCAGGATGTACCCGAGCAGACAAGAAAACGTA +
Preference number: 5 (lower is better)
Translates to: VIAHEIFQRSFHNPT*ISFSRMYPSRQENV
Trigger: TACGTTTTCTTGTCTGCTCGGGTACATCCTGGAGAAACTAATGCAAGTTGGGTTATGAAAGGAACGTTGGAATATCTCATGAGCAATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS GCA 90 bp GGTATAACTTCTTTGTACTCCTATTTCCCTCCAAACTACAACACGTaGTGTGGATTCTTTAGATTTTTCCACTACGAAGCTACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: GITSLYSYFPPNYNT*CGFFRFFHYEATAA
Trigger: AGCAGCTGTAGCTTCGTAGTGGAAAAATCTAAAGAATCCACAGCACGTGTTGTAGTTTGGAGGGAAATAGGAGTACAAAGAAGTTATACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACACGATCCTAGAATTATaGGTAAGGCGGCTCAGGATG +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNTILEL*VRRLRM
Trigger: CATCCTGAGCCGCCTTACCAATAATTCTAGGATCGT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000628899.1
CDS-3UTR CAA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTATTCCTGTAGAACCTTaGGCTGTCATTTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIIPVEP*AVISLL
Trigger: AAGGAGAGAAATGACAGCCAAAGGTTCTACAGGAAT...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTCAGCTCTCCTGGCATTaGTTTTTGATTTTAGCAATG +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSQLSWH*FLILAM
Trigger: CATTGCTAAAATCAAAAACAAATGCCAGGAGAGCTG...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTGACTGCCAGACATTCTaGCGAAGTATTATACAGAAT +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSDCQTF*RSIIQN
Trigger: ATTCTGTATAATACTTCGCAAGAATGTCTGGCAGTC...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR CAA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGTTTTTAGATCTTCTATaGTTCGTCCCGGTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKFLDLL*FVPVLA
Trigger: AGCAAGAACCGGGACGAACAATAGAAGATCTAAAAA...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAGCAATTTTTGTCCTTaGTACACCATAAGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILSNFCP*YTIRPF
Trigger: GAAAGGCCTTATGGTGTACAAAGGACAAAAATTGCT...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTAGCAATTTTTGTCCTTaGTACACCATAAGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSSNFCP*YTIRPF
Trigger: GAAAGGCCTTATGGTGTACAAAGGACAAAAATTGCT...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGAGCAATTTTTGTCCTTaGTACACCATAAGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKSNFCP*YTIRPF
Trigger: GAAAGGCCTTATGGTGTACAAAGGACAAAAATTGCT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACATCCGGACTTGGACTTaGCCACTGCCTATTCAAATC +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNIRTWT*PLPIQI
Trigger: GATTTGAATAGGCAGTGGCAAAGTCCAAGTCCGGAT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATTGCCACACTGTCTCTTaGATGCTGCAACCATACATA +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNCHTVS*MLQPYI
Trigger: TATGTATGGTTGCAGCATCAAAGAGACAGTGTGGCA...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGCATGGTATAACTTCTTaGTACTCCTATTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILHGITS*YSYFPP
Trigger: TGGAGGGAAATAGGAGTACAAAGAAGTTATACCATG...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATCATGGTATAACTTCTTaGTACTCCTATTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: VECNGFKANPGLLQSQPNHGITS*YSYFPP
Trigger: TGGAGGGAAATAGGAGTACAAAGAAGTTATACCATG...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS TCA 90 bp GAATGGAGGCGGAATGTGACCAAAATAATCGGGATAAGCCACCTCTaGATATTCTGGGACAGACTTCGTATTTTTCACAATCTCAATATA +
Preference number: 5 (lower is better)
Translates to: EWRRNVTKIIGISHL*IFWDRLRIFHNLNI
Trigger: TATATTGAGATTGTGAAAAATACGAAGTCTGTCCCAGAATATTCAGAGGTGGCTTATCCCGATTATTTTGGTCACATTCCGCCTCCATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATATTCCTGTAGAACCTTaGGCTGTCATTTCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNIPVEP*AVISLL
Trigger: AAGGAGAGAAATGACAGCCAAAGGTTCTACAGGAAT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACTGTGGGGGAGATTCTTaGCTGGCATTCATAAGTAAC +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNCGGDS*LAFISN
Trigger: GTTACTTATGAATGCCAGCAAAGAATCTCCCCCACA...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGTTCTGCAAATTCTGCTaGACCAAATTCAGGGTTATA +
Preference number: 5 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKFCKFC*TKFRVI
Trigger: TATAACCCTGAATTTGGTCAAGCAGAATTTGCAGAA...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGTTCTGCAAATTCTGCTaGACCAAATTCAGGGTTATA +
Preference number: 5 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILFCKFC*TKFRVI
Trigger: TATAACCCTGAATTTGGTCAAGCAGAATTTGCAGAA...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTCCTGGCATTTGTTTTaGATTTTAGCAATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSSWHLF*ILAMQQ
Trigger: TTGCTGCATTGCTAAAATCAAAAACAAATGCCAGGA...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp TCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGTCCTGGCATTTGTTTTaGATTTTAGCAATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: SRQTLDYFSHNPIVNMILSWHLF*ILAMQQ
Trigger: TTGCTGCATTGCTAAAATCAAAAACAAATGCCAGGA...CAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGTCCTGGCATTTGTTTTaGATTTTAGCAATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKSWHLF*ILAMQQ
Trigger: TTGCTGCATTGCTAAAATCAAAAACAAATGCCAGGA...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTGACTGCCAGACATTCTaGCGAAGTATTATACAGAAT +
Preference number: 5 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIDCQTF*RSIIQN
Trigger: ATTCTGTATAATACTTCGCAAGAATGTCTGGCAGTC...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAACCTGGGGCTGTTaGAGAAGGAATATTCTGCAA +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNKTWGC*RRNILQ
Trigger: TTGCAGAATATTCCTTCTCAAACAGCCCCAGGTTTT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTGTTCTACCGATGAATTaGACTCAGTATCTTCATCAT +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSVLPMN*TQYLHH
Trigger: ATGATGAAGATACTGAGTCAAATTCATCGGTAGAAC...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGCTGGAATGGTGTAATTaGGGTTATCCAAGTCATATA +
Preference number: 5 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKLEWCN*GYPSHI
Trigger: TATATGACTTGGATAACCCAAATTACACCATTCCAG...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTCTGGAATGGTGTAATTaGGGTTATCCAAGTCATATA +
Preference number: 5 (lower is better)
Translates to: ECNGFKANPGLLQSQPNSLEWCN*GYPSHI
Trigger: TATATGACTTGGATAACCCAAATTACACCATTCCAG...ACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGCGAATACATGAGTGGTaGCATACCATAATTAAACTG +
Preference number: 5 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKRIHEW*HTIIKL
Trigger: CAGTTTAATTATGGTATGCAACCACTCATGTATTCG...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACTGCCACACTGTCTCTTaGATGCTGCAACCATACATA +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNCHTVS*MLQPYI
Trigger: TATGTATGGTTGCAGCATCAAAGAGACAGTGTGGCA...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATGAAGTTGCATTATCATaGGTATGCCACACTGTCTCT +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNEVALS*VCHTVS
Trigger: AGAGACAGTGTGGCATACCAATGATAATGCAACTTC...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCAACATCACATGAAGTaGCATTATCATTGGTATGCC +
Preference number: 5 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIQHHMK*HYHWYA
Trigger: GGCATACCAATGATAATGCAACTTCATGTGATGTTG...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTAGAATGTAATGGTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATGTAGGGCTAGTTACTTaGCAGCTTGATTCAATTAAA +
Preference number: 5 (lower is better)
Translates to: VECNGFKANPGLLQSQPNVGLVT*QLDSIK
Trigger: TTTAATTGAATCAAGCTGCAAAGTAACTAGCCCTAC...ATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAACCATTACATTCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGAACACATTTATTATCTaGAAACCAAACTGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKNTFII*KPNWPK
Trigger: CTTGGGCCAGTTTGGTTTCAAGATAATAAATGTGTT...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp AGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGAAGGGTATCACTTTTAACTaGCTCATCTTGAGTTACTTC +
Preference number: 5 (lower is better)
Translates to: RQTLDYFSHNPIVNMILKGITFN*LILSYF
Trigger: GAAGTAACTCAAGATGAGCAAGTTAAAAGTGATACC...CTTCAGAATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTTTCTGCAAATTCTGCTaGACCAAATTCAGGGTTATA +
Preference number: 5 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIFCKFC*TKFRVI
Trigger: TATAACCCTGAATTTGGTCAAGCAGAATTTGCAGAA...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTACTGAATTCACAGAGTaGGCAGAATATACTCGTAAA +
Preference number: 5 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMITEFTE*AEYTRK
Trigger: TTTACGAGTATATTCTGCCAACTCTGTGAATTCAGT...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCAGCTCTCCTGGCATTaGTTTTTGATTTTAGCAATG +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNQLSWH*FLILAM
Trigger: CATTGCTAAAATCAAAAACAAATGCCAGGAGAGCTG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATTTTTTAGATCTTCTATaGTTCGTCCCGGTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNFLDLL*FVPVLA
Trigger: AGCAAGAACCGGGACGAACAATAGAAGATCTAAAAA...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTGTTCTACCGATGAATTaGACTCAGTATCTTCATCAT +
Preference number: 5 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMIVLPMN*TQYLHH
Trigger: ATGATGAAGATACTGAGTCAAATTCATCGGTAGAAC...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTCTGGAATGGTGTAATTaGGGTTATCCAAGTCATATA +
Preference number: 5 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMILEWCN*GYPSHI
Trigger: TATATGACTTGGATAACCCAAATTACACCATTCCAG...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCAACATCACATGAAGTaGCATTATCATTGGTATGCC +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNQHHMK*HYHWYA
Trigger: GGCATACCAATGATAATGCAACTTCATGTGATGTTG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCATGGTATAACTTCTTaGTACTCCTATTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNHGITS*YSYFPP
Trigger: TGGAGGGAAATAGGAGTACAAAGAAGTTATACCATG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGACCAACACAAAATTTaGCTCCCATCTCTTCCAGTT +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNDQHKI*LPSLPV
Trigger: AACTGGAAGAGATGGGAGCAAAATTTTGTGTTGGTC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTTTCAAGGCAAACCCTGGACTACTTCAGTCACAACCCAATAGTTAACATGATTAACACATTTATTATCTaGAAACCAAACTGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: VSRQTLDYFSHNPIVNMINTFII*KPNWPK
Trigger: CTTGGGCCAGTTTGGTTTCAAGATAATAAATGTGTT...AATCATGTTAACTATTGGGTTGTGACTGAAGTAGTCCAGGGTTTGCCTTGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATACTGAATTCACAGAGTaGGCAGAATATACTCGTAAA +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNTEFTE*AEYTRK
Trigger: TTTACGAGTATATTCTGCCAACTCTGTGAATTCAGT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCAGCTCTCCTGGCATTaGTTTTTGATTTTAGCAATG +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNQLSWH*FLILAM
Trigger: CATTGCTAAAATCAAAAACAAATGCCAGGAGAGCTG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACTTTTTAGATCTTCTATaGTTCGTCCCGGTTCTTGCT +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNFLDLL*FVPVLA
Trigger: AGCAAGAACCGGGACGAACAATAGAAGATCTAAAAA...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATGTTCTACCGATGAATTaGACTCAGTATCTTCATCAT +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNVLPMN*TQYLHH
Trigger: ATGATGAAGATACTGAGTCAAATTCATCGGTAGAAC...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACAGCAATTTTTGTCCTTaGTACACCATAAGGCCTTTC +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNSNFCP*YTIRPF
Trigger: GAAAGGCCTTATGGTGTACAAAGGACAAAAATTGCT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCTGGAATGGTGTAATTaGGGTTATCCAAGTCATATA +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNLEWCN*GYPSHI
Trigger: TATATGACTTGGATAACCCAAATTACACCATTCCAG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATCGAATACATGAGTGGTaGCATACCATAATTAAACTG +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNRIHEW*HTIIKL
Trigger: CAGTTTAATTATGGTATGCAACCACTCATGTATTCG...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCAACATCACATGAAGTaGCATTATCATTGGTATGCC +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNQHHMK*HYHWYA
Trigger: GGCATACCAATGATAATGCAACTTCATGTGATGTTG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATGTAGGGCTAGTTACTTaGCAGCTTGATTCAATTAAA +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNVGLVT*QLDSIK
Trigger: TTTAATTGAATCAAGCTGCAAAGTAACTAGCCCTAC...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp GTCTTTTTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAACACATTTATTATCTaGAAACCAAACTGGCCCAAG +
Preference number: 5 (lower is better)
Translates to: VFLSQLCINSFLSSFLGNNTFII*KPNWPK
Trigger: CTTGGGCCAGTTTGGTTTCAAGATAATAAATGTGTT...ATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAAAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACTTCTGCAAATTCTGCTaGACCAAATTCAGGGTTATA +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNFCKFC*TKFRVI
Trigger: TATAACCCTGAATTTGGTCAAGCAGAATTTGCAGAA...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACACTGAATTCACAGAGTaGGCAGAATATACTCGTAAA +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNTEFTE*AEYTRK
Trigger: TTTACGAGTATATTCTGCCAACTCTGTGAATTCAGT...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACTCCTGGCATTTGTTTTaGATTTTAGCAATGCAGCAA +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNSWHLF*ILAMQQ
Trigger: TTGCTGCATTGCTAAAATCAAAAACAAATGCCAGGA...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGTTCTACCGATGAATTaGACTCAGTATCTTCATCAT +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNVLPMN*TQYLHH
Trigger: ATGATGAAGATACTGAGTCAAATTCATCGGTAGAAC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACCGAATACATGAGTGGTaGCATACCATAATTAAACTG +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNRIHEW*HTIIKL
Trigger: CAGTTTAATTATGGTATGCAACCACTCATGTATTCG...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGTAGGGCTAGTTACTTaGCAGCTTGATTCAATTAAA +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNVGLVT*QLDSIK
Trigger: TTTAATTGAATCAAGCTGCAAAGTAACTAGCCCTAC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS-3UTR CAA 90 bp TTGAGTCAGCTCTGTATAAACTCATTTCTCTCAAGCTTCCTGGGAAATAAAAACGGTATCACTTTTAACTaGCTCATCTTGAGTTACTTC +
Preference number: 5 (lower is better)
Translates to: LSQLCINSFLSSFLGNKNGITFN*LILSYF
Trigger: GAAGTAACTCAAGATGAGCAAGTTAAAAGTGATACC...GTTTTTATTTCCCAGGAAGCTTGAGAGAAATGAGTTTATACAGAGCTGACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357081.8
ENST00000376083.7
CDS CCA 72 bp GGGACCGCGCAGAGCCGCAGCACCCGGCTCAGCACCTaGATCACGGCGGATCCCTCGCCGCCCGCCGCCCGG +
Preference number: 6 (lower is better)
Translates to: GTAQSRSTRLST*ITADPSPPAAR
Trigger: CCGGGCGGCGGGCGGCGAGGGATCCGCCGTGATCCAGGTGCTGAGCCGGGTGCTGCGGCTCTGCGCGGTCCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376081.8
ENST00000628899.1
CDS CCA 72 bp GCCGCCCGCCGCCCGGTGTTTTCATACAAACCCCGGTaGCAGGCGAGGCGGAGGCGGCGGCGGCGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: AARRPVFSYKPR*QARRRRRRRQL
Trigger: CAGCTGCCGCCGCCGCCGCCTCCGCCTCGCCTGCCACCGGGGTTTGTATGAAAACACCGGGCGGCGGGCGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000628899.1
CDS CAA 72 bp TATCAGGGGTCCCAAGACCACCATAGGGTTAGTGATTaGCTAGGAAGACTCACAGGACTCAGCACACAGTTG +
Preference number: 6 (lower is better)
Translates to: YQGSQDHHRVSD*LGRLTGLSTQL
Trigger: CAACTGTGTGCTGAGTCCTGTGAGTCTTCCTAGCAAATCACTAACCCTATGGTGGTCTTGGGACCCCTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489265.1
CDS CCA 72 bp AAGCTACAGCTGCTCATGCAAAATGCTGGGGCGATATaGCTCAGTATCTTAGGCAATGTCCTGTATCCCGTA +
Preference number: 6 (lower is better)
Translates to: KLQLLMQNAGAI*LSILGNVLYPV
Trigger: TACGGGATACAGGACATTGCCTAAGATACTGAGCCATATCGCCCCAGCATTTTGCATGAGCAGCTGTAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CCA 72 bp TTCCACTACGAAGCTACAGCTGCTCATGCAAAATGCTaGGGCGATATGGCTCAGTATCTTAGGCAATGTCCT +
Preference number: 6 (lower is better)
Translates to: FHYEATAAHAKC*GDMAQYLRQCP
Trigger: AGGACATTGCCTAAGATACTGAGCCATATCGCCCCAGCATTTTGCATGAGCAGCTGTAGCTTCGTAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CCA 72 bp TCCCTCAAACAGAACATTTCCACAAGTAGCCATGTGTaGACATGCTTTAGCACAGGTAAGGACAGTAAGAGG +
Preference number: 6 (lower is better)
Translates to: SLKQNISTSSHV*TCFSTGKDSKR
Trigger: CCTCTTACTGTCCTTACCTGTGCTAAAGCATGTCCACACATGGCTACTTGTGGAAATGTTCTGTTTGAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CCA 72 bp CACAATCTCAATATAGAGGTCTGGGTCATGGAGTGTTaGTCCATCAGGTACTTCAACCGATGCTTGTTCTAC +
Preference number: 6 (lower is better)
Translates to: HNLNIEVWVMEC*SIRYFNRCLFY
Trigger: GTAGAACAAGCATCGGTTGAAGTACCTGATGGACCAACACTCCATGACCCAGACCTCTATATTGAGATTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CAA 72 bp TTTGGGAAACACTTCCTCATTATCAGACTGGAGGTATaGACAAGAGGATCCAGAGTCCTGACTGCCAGACAT +
Preference number: 6 (lower is better)
Translates to: FGKHFLIIRLEV*TRGSRVLTARH
Trigger: ATGTCTGGCAGTCAGGACTCTGGATCCTCTTGTCAATACCTCCAGTCTGATAATGAGGAAGTGTTTCCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376081.8
CDS CAA 90 bp TTGCTGGCATTCATAAGTAACTGCAACAATATTTGTGAACCACCTTaGGTGACTAAGAAACTCACTCTTCGACCTCCACCAGCTGACACC +
Preference number: 6 (lower is better)
Translates to: LLAFISNCNNICEPP*VTKKLTLRPPPADT
Trigger: GGTGTCAGCTGGTGGAGGTCGAAGAGTGAGTTTCTTAGTCACCAAAGGTGGTTCACAAATATTGTTGCAGTTACTTATGAATGCCAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376080.2
ENST00000376081.8
ENST00000376083.7
ENST00000628899.1
CDS CAA 90 bp GCATGTTTCTATGCCGGTTATCATGGCGGTGCCAATCTACATAAATaGTTAAAAGCACTTGGACATATCCTCTGTCTACAGCTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: ACFYAGYHGGANLHK*LKALGHILCLQLSW
Trigger: CCAGGAGAGCTGTAGACAGAGGATATGTCCAAGTGCTTTTAACAATTTATGTAGATTGGCACCGCCATGATAACCGGCATAGAAACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376080.2
ENST00000376083.7
ENST00000491784.3
ENST00000628899.1
CDS GCA 72 bp ACTCAGTATCTTCATCATCTTCAGTTTCAACTCCAGTaGAGCAAAGCTTCCCTAGCTGAACTGTTCTTCCCT +
Preference number: 6 (lower is better)
Translates to: TQYLHHLQFQLQ*SKASLAELFFP
Trigger: AGGGAAGAACAGTTCAGCTAGGGAAGCTTTGCTGCACTGGAGTTGAAACTGAAGATGATGAAGATACTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CAA 72 bp TCACAATCTCAATATAGAGGTCTGGGTCATGGAGTGTaGGTCCATCAGGTACTTCAACCGATGCTTGTTCTA +
Preference number: 6 (lower is better)
Translates to: SQSQYRGLGHGV*VHQVLQPMLVL
Trigger: TAGAACAAGCATCGGTTGAAGTACCTGATGGACCAACACTCCATGACCCAGACCTCTATATTGAGATTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CAA 90 bp TTGGTCCATCAGGTACTTCAACCGATGCTTGTTCTACCGATGAATTaGACTCAGTATCTTCATCATCTTCAGTTTCAACTCCAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: LVHQVLQPMLVLPMN*TQYLHHLQFQLQCS
Trigger: GCTGCACTGGAGTTGAAACTGAAGATGATGAAGATACTGAGTCAAATTCATCGGTAGAACAAGCATCGGTTGAAGTACCTGATGGACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS GCA 72 bp CATGAGATATTCCAACGTTCCTTTCATAACCCAACTTaGATTAGTTTCTCCAGGATGTACCCGAGCAGACAA +
Preference number: 6 (lower is better)
Translates to: HEIFQRSFHNPT*ISFSRMYPSRQ
Trigger: TTGTCTGCTCGGGTACATCCTGGAGAAACTAATGCAAGTTGGGTTATGAAAGGAACGTTGGAATATCTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CCA 72 bp GAGAAGTCATCAGAGCTTTCAGCAATTTCAAAGGATTaGAGGCAAAAACTGAAGTTCAGAGCTGCCAAGGTT +
Preference number: 6 (lower is better)
Translates to: EKSSELSAISKD*RQKLKFRAAKV
Trigger: AACCTTGGCAGCTCTGAACTTCAGTTTTTGCCTCCAATCCTTTGAAATTGCTGAAAGCTCTGATGACTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489265.1
CDS CAA 90 bp TCGTATTTTTCACAATCTCAATATAGAGGTCTGGGTCATGGAGTGTaGGTCCATCAGGTACTTCAACCGATGCTTGTTCTACCGATGAAT +
Preference number: 6 (lower is better)
Translates to: SYFSQSQYRGLGHGV*VHQVLQPMLVLPMN
Trigger: ATTCATCGGTAGAACAAGCATCGGTTGAAGTACCTGATGGACCAACACTCCATGACCCAGACCTCTATATTGAGATTGTGAAAAATACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS TCA 72 bp TCCTTCTTCATTTCTGCAGTAAAACCTGGGGCTGTTTaGGAAGGAATATTCTGCAATGTAATTCGGTCCAAG +
Preference number: 6 (lower is better)
Translates to: SFFISAVKPGAV*EGIFCNVIRSK
Trigger: CTTGGACCGAATTACATTGCAGAATATTCCTTCTCAAACAGCCCCAGGTTTTACTGCAGAAATGAAGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CCA 72 bp AGACTTCGTATTTTTCACAATCTCAATATAGAGGTCTaGGTCATGGAGTGTTGGTCCATCAGGTACTTCAAC +
Preference number: 6 (lower is better)
Translates to: RLRIFHNLNIEV*VMECWSIRYFN
Trigger: GTTGAAGTACCTGATGGACCAACACTCCATGACCCAGACCTCTATATTGAGATTGTGAAAAATACGAAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CAA 72 bp TATGCCGGTTATCATGGCGGTGCCAATCTACATAAATaGTTAAAAGCACTTGGACATATCCTCTGTCTACAG +
Preference number: 6 (lower is better)
Translates to: YAGYHGGANLHK*LKALGHILCLQ
Trigger: CTGTAGACAGAGGATATGTCCAAGTGCTTTTAACAATTTATGTAGATTGGCACCGCCATGATAACCGGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376080.2
ENST00000376083.7
ENST00000491784.3
ENST00000628899.1
CDS CAA 90 bp CTGTATCCCGTATCCTCCACAACATCACATGAAGTTGCATTATCATaGGTATGCCACACTGTCTCTTTGATGCTGCAACCATACATAAAT +
Preference number: 6 (lower is better)
Translates to: LYPVSSTTSHEVALS*VCHTVSLMLQPYIN
Trigger: ATTTATGTATGGTTGCAGCATCAAAGAGACAGTGTGGCATACCAATGATAATGCAACTTCATGTGATGTTGTGGAGGATACGGGATACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CAA 90 bp TTGCTGGCATTCATAAGTAACTGCAACAATATTTGTGAACCACCTTaGGTGACTAAGAAACTCACTCTTCGACCTCCACCTCTAATGTTG +
Preference number: 6 (lower is better)
Translates to: LLAFISNCNNICEPP*VTKKLTLRPPPLML
Trigger: CAACATTAGAGGTGGAGGTCGAAGAGTGAGTTTCTTAGTCACCAAAGGTGGTTCACAAATATTGTTGCAGTTACTTATGAATGCCAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491784.3
CDS TCA 72 bp CGGAATGTGACCAAAATAATCGGGATAAGCCACCTCTaGATATTCTGGGACAGACTTCGTATTTTTCACAAT +
Preference number: 6 (lower is better)
Translates to: RNVTKIIGISHL*IFWDRLRIFHN
Trigger: ATTGTGAAAAATACGAAGTCTGTCCCAGAATATTCAGAGGTGGCTTATCCCGATTATTTTGGTCACATTCCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS GCA 72 bp TCTTTGTACTCCTATTTCCCTCCAAACTACAACACGTaGTGTGGATTCTTTAGATTTTTCCACTACGAAGCT +
Preference number: 6 (lower is better)
Translates to: SLYSYFPPNYNT*CGFFRFFHYEA
Trigger: AGCTTCGTAGTGGAAAAATCTAAAGAATCCACAGCACGTGTTGTAGTTTGGAGGGAAATAGGAGTACAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CCA 72 bp AAGACTGCAGTCCTTCTTCATTTCTGCAGTAAAACCTaGGGCTGTTTGAGAAGGAATATTCTGCAATGTAAT +
Preference number: 6 (lower is better)
Translates to: KTAVLLHFCSKT*GCLRRNILQCN
Trigger: ATTACATTGCAGAATATTCCTTCTCAAACAGCCCCAGGTTTTACTGCAGAAATGAAGAAGGACTGCAGTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CCA 72 bp TTCACAGTTAATGATGTTAAACCTGTAAGCAACACCTaGTCGCATTCCACTGACTTCAAAGTAAAACCACTG +
Preference number: 6 (lower is better)
Translates to: FTVNDVKPVSNT*SHSTDFKVKPL
Trigger: CAGTGGTTTTACTTTGAAGTCAGTGGAATGCGACCAGGTGTTGCTTACAGGTTTAACATCATTAACTGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CCA 72 bp TCTGAAATGGCAGATATGTTCATAATAATTAGACTCTaGCATTGCTGTTATAGTCACCAAGGGGCAGCTGTT +
Preference number: 6 (lower is better)
Translates to: SEMADMFIIIRL*HCCYSHQGAAV
Trigger: AACAGCTGCCCCTTGGTGACTATAACAGCAATGCCAGAGTCTAATTATTATGAACATATCTGCCATTTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CAA 72 bp TTCATAAGTAACTGCAACAATATTTGTGAACCACCTTaGGTGACTAAGAAACTCACTCTTCGACCTCCACCA +
Preference number: 6 (lower is better)
Translates to: FISNCNNICEPP*VTKKLTLRPPP
Trigger: TGGTGGAGGTCGAAGAGTGAGTTTCTTAGTCACCAAAGGTGGTTCACAAATATTGTTGCAGTTACTTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376080.2
ENST00000376081.8
ENST00000376083.7
ENST00000628899.1
CDS CAA 72 bp TTCATAAGTAACTGCAACAATATTTGTGAACCACCTTaGGTGACTAAGAAACTCACTCTTCGACCTCCACCT +
Preference number: 6 (lower is better)
Translates to: FISNCNNICEPP*VTKKLTLRPPP
Trigger: AGGTGGAGGTCGAAGAGTGAGTTTCTTAGTCACCAAAGGTGGTTCACAAATATTGTTGCAGTTACTTATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491784.3
CDS CAA 90 bp AGGGTTAGTGATTTGCTAGGAAGACTCACAGGACTCAGCACACAGTaGAATTCAGTTATGACTTATTACAGTGAAAGGATACAAAGCAAA +
Preference number: 6 (lower is better)
Translates to: RVSDLLGRLTGLSTQ*NSVMTYYSERIQSK
Trigger: TTTGCTTTGTATCCTTTCACTGTAATAAGTCATAACTGAATTCAACTGTGTGCTGAGTCCTGTGAGTCTTCCTAGCAAATCACTAACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489265.1
CDS CCA 72 bp ATTTTCCCTGATCACAGCCACATAAAGTACTCTCCATaGTATAACTTCTTTGTACTCCTATTTCCCTCCAAA +
Preference number: 6 (lower is better)
Translates to: IFPDHSHIKYSP*YNFFVLLFPSK
Trigger: TTTGGAGGGAAATAGGAGTACAAAGAAGTTATACCATGGAGAGTACTTTATGTGGCTGTGATCAGGGAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000489265.1
ENST00000628899.1
CDS CAA 72 bp ATCTGTACCATTAAGTCCTCATGTGGGGGAGATTCTTaGCTGGCATTCATAAGTAACTGCAACAATATTTGT +
Preference number: 6 (lower is better)
Translates to: ICTIKSSCGGDS*LAFISNCNNIC
Trigger: ACAAATATTGTTGCAGTTACTTATGAATGCCAGCAAAGAATCTCCCCCACATGAGGACTTAATGGTACAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376080.2
ENST00000376081.8
ENST00000376083.7
ENST00000491784.3
ENST00000628899.1
CDS CAA 72 bp GATTTGCTAGGAAGACTCACAGGACTCAGCACACAGTaGAATTCAGTTATGACTTATTACAGTGAAAGGATA +
Preference number: 6 (lower is better)
Translates to: DLLGRLTGLSTQ*NSVMTYYSERI
Trigger: TATCCTTTCACTGTAATAAGTCATAACTGAATTCAACTGTGTGCTGAGTCCTGTGAGTCTTCCTAGCAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489265.1
CDS CAA 90 bp ACTGCCAGACATTCTTGCGAAGTATTATACAGAATTTTCATCCCATaGGCATCAATAAATGCTTTTCTTCCCAACTTGATGTTTGTAACA +
Preference number: 6 (lower is better)
Translates to: TARHSCEVLYRIFIP*ASINAFLPNLMFVT
Trigger: TGTTACAAACATCAAGTTGGGAAGAAAAGCATTTATTGATGCCAATGGGATGAAAATTCTGTATAATACTTCGCAAGAATGTCTGGCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8
CDS CCA 72 bp AAGATATTTCATTTATTCTTTGCAGTTAACAAGAGATaGCAGCGGGCTCAAGGTAGGTATGTTCTTGATAAT +
Preference number: 6 (lower is better)
Translates to: KIFHLFFAVNKR*QRAQGRYVLDN
Trigger: ATTATCAAGAACATACCTACCTTGAGCCCGCTGCCATCTCTTGTTAACTGCAAAGAATAAATGAAATATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337006.8
ENST00000357081.8
ENST00000376083.7
ENST00000628899.1
CDS CAA 72 bp GGCAATTGCGAAGTATTATACAGAATTTTCATCCCATaGGCATCAATAAATGCTTTTCTTCCCAACTTGATG +
Preference number: 6 (lower is better)
Translates to: GNCEVLYRIFIP*ASINAFLPNLM
Trigger: CATCAAGTTGGGAAGAAAAGCATTTATTGATGCCAATGGGATGAAAATTCTGTATAATACTTCGCAATTGCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376083.7
ENST00000628899.1
CDS CAA 72 bp CATTCTTGCGAAGTATTATACAGAATTTTCATCCCATaGGCATCAATAAATGCTTTTCTTCCCAACTTGATG +
Preference number: 6 (lower is better)
Translates to: HSCEVLYRIFIP*ASINAFLPNLM
Trigger: CATCAAGTTGGGAAGAAAAGCATTTATTGATGCCAATGGGATGAAAATTCTGTATAATACTTCGCAAGAATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337006.8
ENST00000357081.8