Pregenerated sensors for AGGF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000164252Ensembl transcript IDs: ENST00000312916.12, ENST00000503538.5, ENST00000506806.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | AGAATGTTTATAACCCTTATATATGCTGTGACGGACCAAAGAAGTCTATCTTTCAAGAAGGACAGGTTCTaGGGCATCAACAGTTTCATG | + |
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Preference number: 3 (lower is better) Translates to: RMFITLIYAVTDQRSLSFKKDRF*GINSFM Trigger: CATGAAACTGTTGATGCCCAAGAACCTGTCCTTCTT...GAAAGATAGACTTCTTTGGTCCGTCACAGCATATATAAGGGTTATAAACATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR TCA 90 bp | ACCCTTATATATGCTGTGACGGACCAAAGAAGTCTATCTTTCCACATAATAACAGCGCCTCCGAGGCCATaGGCTCCGGCGCGAGACTGC | + |
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Preference number: 4 (lower is better) Translates to: TLIYAVTDQRSLSFHIITAPPRP*APARDC Trigger: GCAGTCTCGCGCCGGAGCTCATGGCCTCGGAGGCGC...TGTTATTATGTGGAAAGATAGACTTCTTTGGTCCGTCACAGCATATATAAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR GCA 90 bp | GTTTATAACCCTTATATATGCTGTGACGGACCAAAGAAGTCTATCTTTCCACATACCGAGGATGGCCCCTaGCCGATGTGCGCGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: VYNPYICCDGPKKSIFPHTEDGP*PMCAAC Trigger: GCAGGCCGCGCACATCGGGCAGGGGCCATCCTCGGT...ATGTGGAAAGATAGACTTCTTTGGTCCGTCACAGCATATATAAGGGTTATAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR GCA 90 bp | AGAAGTCTATCTTTCCACATAATAACAACAAAGAAGGACAGGTTCTTGGGCATCTCGCCGCGGAGGGGCTaGGTTCAGGCCGAAACGGAC | + |
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Preference number: 4 (lower is better) Translates to: RSLSFHIITTKKDRFLGISPRRG*VQAETD Trigger: GTCCGTTTCGGCCTGAACGCAGCCCCTCCGCGGCGA...GATGCCCAAGAACCTGTCCTTCTTTGTTGTTATTATGTGGAAAGATAGACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR GCA 90 bp | AATGTTTATAACCCTTATATATGCTGTGACGGACCAAAGAAGTCTATCTTTCCAGGCCCCTGCCCGATGTaGGCGGCCTGCAAACCGGAA | + |
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Preference number: 4 (lower is better) Translates to: NVYNPYICCDGPKKSIFPGPCPM*AACKPE Trigger: TTCCGGTTTGCAGGCCGCGCACATCGGGCAGGGGCC...TGGAAAGATAGACTTCTTTGGTCCGTCACAGCATATATAAGGGTTATAAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR CCA 90 bp | ATAACCCTTATATATGCTGTGACGGACCAAAGAAGTCTATCTTTCCACATAATACAAGGGGACCGAGGATaGCCCCTGCCCGATGTGCGC | + |
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Preference number: 4 (lower is better) Translates to: ITLIYAVTDQRSLSFHIIQGDRG*PLPDVR Trigger: GCGCACATCGGGCAGGGGCCATCCTCGGTCCCCTTG...TATTATGTGGAAAGATAGACTTCTTTGGTCCGTCACAGCATATATAAGGGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR CCA 90 bp | AAGAAGTCTATCTTTCCACATAATAACAACAAAGAAGGACAGGTTCTTGGGCATGGACCCAGAGACCACTaGAGCGCGCGGGCAGCGAAA | + |
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Preference number: 4 (lower is better) Translates to: KKSIFPHNNNKEGQVLGHGPRDH*SARAAK Trigger: TTTCGCTGCCCGCGCGCTCCAGTGGTCTCTGGGTCC...ATGCCCAAGAACCTGTCCTTCTTTGTTGTTATTATGTGGAAAGATAGACTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR GCA 90 bp | AAGAAGTCTATCTTTCCACATAATAACAACAAAGAAGGACAGGTTCTTGGGCATGTAGCCGAACGGGGCTaGGAGCAACGAGCAAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KKSIFPHNNNKEGQVLGHVAERG*EQRARG Trigger: TCCCCTTGCTCGTTGCTCGCAGCCCCGTTCGGCTAC...ATGCCCAAGAACCTGTCCTTCTTTGTTGTTATTATGTGGAAAGATAGACTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR CCA 90 bp | TGTAAATGTGGTATTGTTGTCCACAGTTCTTTTGTTCAGTCAAAATATCTGGACACCTTCCGCCTTAGCTaGGCCAGCTCAGGCTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: CKCGIVVHSSFVQSKYLDTFRLS*ASSGSG Trigger: CCCCGAGCCTGAGCTGGCCCAGCTAAGGCGGAAGGT...GTCCAGATATTTTGACTGAACAAAAGAACTGTGGACAACAATACCACATTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR TCA 90 bp | CACATAAGAATGTTTATAACCCTTATATATGCTGTGACGGACCAAAGAAGTCTAGGTGGCCCCTGGCCATaGCGCCCTGAAACTCACTTG | + |
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Preference number: 4 (lower is better) Translates to: HIRMFITLIYAVTDQRSLGGPWP*RPETHL Trigger: CAAGTGAGTTTCAGGGCGTCATGGCCAGGGGCCACC...TAGACTTCTTTGGTCCGTCACAGCATATATAAGGGTTATAAACATTCTTATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR TCA 90 bp | GTTTATAACCCTTATATATGCTGTGACGGACCAAAGAAGTCTATCTTTCCACATCTGGCCATGACGCCCTaGAACTCACTTGTAGCCGAA | + |
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Preference number: 4 (lower is better) Translates to: VYNPYICCDGPKKSIFPHLAMTP*NSLVAE Trigger: TTCGGCTACAAGTGAGTTTCAGGGCGTCATGGCCAG...ATGTGGAAAGATAGACTTCTTTGGTCCGTCACAGCATATATAAGGGTTATAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR TCA 90 bp | GGACCAAAGAAGTCTATCTTTCCACATAATAACAACAAAGAAGGACAGGTTCTTTACAGCCGTTCTGTGTaGTGCAGCAGCTTCTCGATC | + |
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Preference number: 4 (lower is better) Translates to: GPKKSIFPHNNNKEGQVLYSRSV*CSSFSI Trigger: GATCGAGAAGCTGCTGCATCACACAGAACGGCTGTA...AAGAACCTGTCCTTCTTTGTTGTTATTATGTGGAAAGATAGACTTCTTTGGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR GCA 90 bp | CACATAAGAATGTTTATAACCCTTATATATGCTGTGACGGACCAAAGAAGTCTACCGATGTGCGCGGCCTaGAAACCGGAAAACTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: HIRMFITLIYAVTDQRSLPMCAA*KPENFP Trigger: AGGAAAGTTTTCCGGTTTGCAGGCCGCGCACATCGG...TAGACTTCTTTGGTCCGTCACAGCATATATAAGGGTTATAAACATTCTTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR GCA 90 bp | AGAAGTCTATCTTTCCACATAATAACAACAAAGAAGGACAGGTTCTTGGGCATCCTGGTTGTTGCTTTCTaGGTTCTGGTACAGCCGTTC | + |
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Preference number: 4 (lower is better) Translates to: RSLSFHIITTKKDRFLGILVVAF*VLVQPF Trigger: GAACGGCTGTACCAGAACGCAGAAAGCAACAACCAG...GATGCCCAAGAACCTGTCCTTCTTTGTTGTTATTATGTGGAAAGATAGACTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR CCA 90 bp | ATATATGCTGTGACGGACCAAAGAAGTCTATCTTTCCACATAATAACAACAAAGTGCGTGCGGAGCTCCTaGTTGTTGCTTTCTGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: IYAVTDQRSLSFHIITTKCVRSS*LLLSAF Trigger: GAACGCAGAAAGCAACAACCAGGAGCTCCGCACGCA...CTTTGTTGTTATTATGTGGAAAGATAGACTTCTTTGGTCCGTCACAGCATATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR TCA 90 bp | GTAAATGTGGTATTGTTGTCCACAGTTCTTTTGTTCAGTCAAAATATCTGGACAGTTGGAGTATTTTACTaGGTTCTTCCACCTGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: VNVVLLSTVLLFSQNIWTVGVFY*VLPPAC Trigger: GCACGCAGGTGGAAGAACTCAGTAAAATACTCCAAC...TGTCCAGATATTTTGACTGAACAAAAGAACTGTGGACAACAATACCACATTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR CCA 90 bp | GGACCAAAGAAGTCTATCTTTCCACATAATAACAACAAAGAAGGACAGGTTCTTACCGGAAAACTTTCCTaGAAACTACCTTCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GPKKSIFPHNNNKEGQVLTGKLS*KLPSPA Trigger: AGCTGGAGAAGGTAGTTTCCAGGAAAGTTTTCCGGT...AAGAACCTGTCCTTCTTTGTTGTTATTATGTGGAAAGATAGACTTCTTTGGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR TCA 90 bp | AAGAAGTCTATCTTTCCACATAATAACAACAAAGAAGGACAGGTTCTTGGGCATCCCTTATATATGCTGTaGCGGACCAAAGAAGTCTAT | + |
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Preference number: 4 (lower is better) Translates to: KKSIFPHNNNKEGQVLGHPLYML*RTKEVY Trigger: ATAGACTTCTTTGGTCCGTCACAGCATATATAAGGG...ATGCCCAAGAACCTGTCCTTCTTTGTTGTTATTATGTGGAAAGATAGACTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR GCA 90 bp | ATGTTTATAACCCTTATATATGCTGTGACGGACCAAAGAAGTCTATCTTTCCACTATAACCCTTATATATaGTGTGACGGACCAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: MFITLIYAVTDQRSLSFHYNPYI*CDGPKK Trigger: CTTCTTTGGTCCGTCACAGCATATATAAGGGTTATA...GTGGAAAGATAGACTTCTTTGGTCCGTCACAGCATATATAAGGGTTATAAACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR CCA 90 bp | ACCCTTATATATGCTGTGACGGACCAAAGAAGTCTATCTTTCCACATAATAACATCATTTCTCCCACGTTaGAGTATTTTACTGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: TLIYAVTDQRSLSFHIITSFLPR*SILLSS Trigger: AGAACTCAGTAAAATACTCCAACGTGGGAGAAATGA...TGTTATTATGTGGAAAGATAGACTTCTTTGGTCCGTCACAGCATATATAAGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS TCA 90 bp | GAGTATTTTACTGAGTTCTTCCACCAGATCACTGCATCTGGACAATaGGGCACCATACCCCTCACCCATCATGATTGCCTAACCAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: EYFTEFFHQITASGQ*GTIPLTHHDCLTSH Trigger: GTGGCTGGTTAGGCAATCATGATGGGTGAGGGGTATGGTGCCTCATTGTCCAGATGCAGTGATCTGGTGGAAGAACTCAGTAAAATACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503538.5 |
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| CDS-3UTR CAA 90 bp | GTTTATAACCCTTATATATGCTGTGACGGACCAAAGAAGTCTATCTTTCCACATGTGCGGAGCTCCTGGTaGTTGCTTTCTGCGTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: VYNPYICCDGPKKSIFPHVRSSW*LLSAFW Trigger: CCAGAACGCAGAAAGCAACAACCAGGAGCTCCGCAC...ATGTGGAAAGATAGACTTCTTTGGTCCGTCACAGCATATATAAGGGTTATAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR CAA 90 bp | GTTTATAACCCTTATATATGCTGTGACGGACCAAAGAAGTCTATCTTTCCACATCGGAGCTCCTGGTTGTaGCTTTCTGCGTTCTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: VYNPYICCDGPKKSIFPHRSSWL*LSAFWY Trigger: GTACCAGAACGCAGAAAGCAACAACCAGGAGCTCCG...ATGTGGAAAGATAGACTTCTTTGGTCCGTCACAGCATATATAAGGGTTATAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS TCA 90 bp | AGTCACATTTCTCCCTTGCCATATAAACCTCTAATTTTAGTTGGTTaGGGAGATGGATTTGAGACTGATTTCCTATTCTCCTTGGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SHISPLPYKPLILVG*GDGFETDFLFSLAA Trigger: TGCAGCCAAGGAGAATAGGAAATCAGTCTCAAATCCATCTCCTCAACCAACTAAAATTAGAGGTTTATATGGCAAGGGAGAAATGTGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503538.5 |
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| CDS-3UTR CAA 90 bp | ATGTTTATAACCCTTATATATGCTGTGACGGACCAAAGAAGTCTATCTTTCCACAAGAAGGACAGGTTCTaGGGCATCAACAGTTTCATG | + |
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Preference number: 5 (lower is better) Translates to: MFITLIYAVTDQRSLSFHKKDRF*GINSFM Trigger: CATGAAACTGTTGATGCCCAAGAACCTGTCCTTCTT...GTGGAAAGATAGACTTCTTTGGTCCGTCACAGCATATATAAGGGTTATAAACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR CAA 90 bp | ATGTTTATAACCCTTATATATGCTGTGACGGACCAAAGAAGTCTATCTTTCCACTTATTACCTGTGAATTaGAGGCAAAATGGTCCACTT | + |
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Preference number: 5 (lower is better) Translates to: MFITLIYAVTDQRSLSFHLLPVN*RQNGPL Trigger: AAGTGGACCATTTTGCCTCAAATTCACAGGTAATAA...GTGGAAAGATAGACTTCTTTGGTCCGTCACAGCATATATAAGGGTTATAAACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS-3UTR CAA 90 bp | GTAAATGTGGTATTGTTGTCCACAGTTCTTTTGTTCAGTCAAAATATCTGGACAGTAAATGTGGTATTGTaGTCCACAGTTCTTTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: VNVVLLSTVLLFSQNIWTVNVVL*STVLLF Trigger: GAACAAAAGAACTGTGGACAACAATACCACATTTAC...TGTCCAGATATTTTGACTGAACAAAAGAACTGTGGACAACAATACCACATTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000506806.1 |
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| CDS GCA 72 bp | GCTCCGGCGCGAGACTGCTCGTCGCCGCGGAGGGGCTaGGTTCAGGCCGAAACGGACGCCGGCGGACCCAGA | + |
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Preference number: 6 (lower is better) Translates to: APARDCSSPRRG*VQAETDAGGPR Trigger: TCTGGGTCCGCCGGCGTCCGTTTCGGCCTGAACGCAGCCCCTCCGCGGCGACGAGCAGTCTCGCGCCGGAGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000312916.12 ENST00000506806.1 |
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| CDS TCA 72 bp | CCCGGCTGGCCGCGGTGGCCCCTGGCCATGACGCCCTaGAACTCACTTGTAGCCGAACGGGGCTGCGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: PGWPRWPLAMTP*NSLVAERGCEQ Trigger: TTGCTCGCAGCCCCGTTCGGCTACAAGTGAGTTTCAGGGCGTCATGGCCAGGGGCCACCGCGGCCAGCCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000312916.12 ENST00000506806.1 |
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| CDS TCA 72 bp | TCTCCCTTGCCATATAAACCTCTAATTTTAGTTGGTTaGGGAGATGGATTTGAGACTGATTTCCTATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPLPYKPLILVG*GDGFETDFLFS Trigger: GGAGAATAGGAAATCAGTCTCAAATCCATCTCCTCAACCAACTAAAATTAGAGGTTTATATGGCAAGGGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503538.5 |
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