RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ADGRF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000153292

Ensembl transcript IDs: ENST00000283297.5, ENST00000371243.2, ENST00000371253.7, ENST00000419892.6, ENST00000449332.6, ENST00000471487.5, ENST00000474800.1, ENST00000475745.5, ENST00000477771.5, ENST00000477858.1, ENST00000487323.5, ENST00000491283.5, ENST00000493249.5

Found 373 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGACTCCTTCCTCATCCCACAATCTGGCTTCACCTCCCACTTCTTaGTGCTGGGTTCCCTCCACCTCTTTGGACAACCCTATCAGAGAG +
Preference number: 1 (lower is better)
Translates to: VTPSSSHNLASPPTS*CWVPSTSLDNPIRE
Trigger: CTCTCTGATAGGGTTGTCCAAAGAGGTGGAGGGAACCCAGCATCAAGAAGTGGGAGGTGAAGCCAGATTGTGGGATGAGGAAGGAGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR GCA 90 bp TTTGGCAAGTCACTTTACCTCTCTGAGCCCCCATGCCCTCATCTCTaGACTAGGTCTGCCTTGACACTTTTGTTTGCAGGGTTTAGGACC +
Preference number: 1 (lower is better)
Translates to: FGKSLYLSEPPCPHL*TRSALTLLFAGFRT
Trigger: GGTCCTAAACCCTGCAAACAAAAGTGTCAAGGCAGACCTAGTGCAGAGATGAGGGCATGGGGGCTCAGAGAGGTAAAGTGACTTGCCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR TCA 90 bp CACTTCTGGCTCCGAATTATGAGGCATCATATCTCCTGTAGTTGCTaGAGGAGAAAATCCACCCTTCGACAACCCGCAACCCTTATCCCC +
Preference number: 1 (lower is better)
Translates to: HFWLRIMRHHISCSC*RRKSTLRQPATLIP
Trigger: GGGGATAAGGGTTGCGGGTTGTCGAAGGGTGGATTTTCTCCTTCAGCAACTACAGGAGATATGATGCCTCATAATTCGGAGCCAGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
3UTR TCA 90 bp GTGCAAAGATATCTCACCCAAAGCCCCACTTCTGGCTCCGAATTATaGGGCATCATATCTCCTGTAGTTGCTGAAGGAGAAAATCCACCC +
Preference number: 1 (lower is better)
Translates to: VQRYLTQSPTSGSEL*GIISPVVAEGENPP
Trigger: GGGTGGATTTTCTCCTTCAGCAACTACAGGAGATATGATGCCTCATAATTCGGAGCCAGAAGTGGGGCTTTGGGTGAGATATCTTTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371243.2
3UTR CCA 90 bp GTCACGGCTGAAACTCAGGTAGGTGAGCCAAATGTGATGGAAGTATaGAAGAGAAGTGTTGCTTCACATAGCGTCAACTCCTGCTGCTTT +
Preference number: 1 (lower is better)
Translates to: VTAETQVGEPNVMEV*KRSVASHSVNSCCF
Trigger: AAAGCAGCAGGAGTTGACGCTATGTGAAGCAACACTTCTCTTCCATACTTCCATCACATTTGGCTCACCTACCTGAGTTTCAGCCGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CCA 90 bp GAGCCCCATGCTGACCTTCACTCTTGCATGTCTCACTATGGTTCATaGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACA +
Preference number: 1 (lower is better)
Translates to: EPHADLHSCMSHYGS*ETHTSIALTNTRHT
Trigger: TGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACCATAGTGAGACATGCAAGAGTGAAGGTCAGCATGGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR GCA 90 bp AGCTGTGGCCACAATTCTAGGCAAGAATCAGACTTCCATCAGCCATaGATCCTAATTGTTGTGGTTCTGAGAAATCTGAGCTATCTGAGC +
Preference number: 1 (lower is better)
Translates to: SCGHNSRQESDFHQP*ILIVVVLRNLSYLS
Trigger: GCTCAGATAGCTCAGATTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGCCTAGAATTGTGGCCACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR GCA 90 bp ATGGAAGTATGGAAGAGAAGTGTTGCTTCACATAGCGTCAACTCCTaGTGCTTTGTATGTCATCCAAAAGTGGCACTGGCTGTACAAGAA +
Preference number: 1 (lower is better)
Translates to: MEVWKRSVASHSVNS*CFVCHPKVALAVQE
Trigger: TTCTTGTACAGCCAGTGCCACTTTTGGATGACATACAAAGCAGCAGGAGTTGACGCTATGTGAAGCAACACTTCTCTTCCATACTTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CCA 90 bp CTTCACATAGCGTCAACTCCTGCTGCTTTGTATGTCATCCAAAAGTaGCACTGGCTGTACAAGAAAATAACTTCCACAAAGTGCCTATGG +
Preference number: 1 (lower is better)
Translates to: LHIASTPAALYVIQK*HWLYKKITSTKCLW
Trigger: CCATAGGCACTTTGTGGAAGTTATTTTCTTGTACAGCCAGTGCCACTTTTGGATGACATACAAAGCAGCAGGAGTTGACGCTATGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CCA 90 bp CTGTCTTATGAGATAGGGCTGCCTTCACATGGTGTCAGGGTTCTCTaGATAGTAATTGTGTGTAATAAGAGAGGGAGCATTCAAGAACTC +
Preference number: 1 (lower is better)
Translates to: LSYEIGLPSHGVRVL*IVIVCNKRGSIQEL
Trigger: GAGTTCTTGAATGCTCCCTCTCTTATTACACACAATTACTATCCAGAGAACCCTGACACCATGTGAAGGCAGCCCTATCTCATAAGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR TCA 90 bp CCCTACTGCTATTGTTTTGTAGTTCTACTCACTGACCCACAGTTTTaGGAATGCTTTCCAATATTTAAGGTCCTAGGCCAGATGTGGTGG +
Preference number: 1 (lower is better)
Translates to: PYCYCFVVLLTDPQF*ECFPIFKVLGQMWW
Trigger: CCACCACATCTGGCCTAGGACCTTAAATATTGGAAAGCATTCTCAAAACTGTGGGTCAGTGAGTAGAACTACAAAACAATAGCAGTAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371243.2
3UTR GCA 90 bp GAAGTATGGAAGAGAAGTGTTGCTTCACATAGCGTCAACTCCTGCTaGTTTGTATGTCATCCAAAAGTGGCACTGGCTGTACAAGAAAAT +
Preference number: 1 (lower is better)
Translates to: EVWKRSVASHSVNSC*FVCHPKVALAVQEN
Trigger: ATTTTCTTGTACAGCCAGTGCCACTTTTGGATGACATACAAAGCAGCAGGAGTTGACGCTATGTGAAGCAACACTTCTCTTCCATACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR GCA 90 bp AGTACTAAATTTTTCTTCCCTCTCCAACTGAGTCTTGTGTTGAGTTaGCTACTTGCGCTAGCACATCTTCCCTTGCTGGTTGACATTTTT +
Preference number: 1 (lower is better)
Translates to: STKFFFPLQLSLVLS*LLALAHLPLLVDIF
Trigger: AAAAATGTCAACCAGCAAGGGAAGATGTGCTAGCGCAAGTAGGCAACTCAACACAAGACTCAGTTGGAGAGGGAAGAAAAATTTAGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CCA 90 bp ATAGCGTCAACTCCTGCTGCTTTGTATGTCATCCAAAAGTGGCACTaGCTGTACAAGAAAATAACTTCCACAAAGTGCCTATGGTGTATT +
Preference number: 1 (lower is better)
Translates to: IASTPAALYVIQKWH*LYKKITSTKCLWCI
Trigger: AATACACCATAGGCACTTTGTGGAAGTTATTTTCTTGTACAGCCAGTGCCACTTTTGGATGACATACAAAGCAGCAGGAGTTGACGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR GCA 90 bp TCAGTCATTTCCTTTGAACCTCTCACTTTCATATTTCATGTGTGCTaGACCTTGGTGCCTTGTGGAAGTCTAACTTTGAATTTCTCTCAG +
Preference number: 1 (lower is better)
Translates to: SVISFEPLTFIFHVC*TLVPCGSLTLNFSQ
Trigger: CTGAGAGAAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATGAAATATGAAAGTGAGAGGTTCAAAGGAAATGACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR GCA 90 bp TCCTCAGTCATTTCCTTTGAACCTCTCACTTTCATATTTCATGTGTaGTGCACCTTGGTGCCTTGTGGAAGTCTAACTTTGAATTTCTCT +
Preference number: 1 (lower is better)
Translates to: SSVISFEPLTFIFHV*CTLVPCGSLTLNFS
Trigger: AGAGAAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATGAAATATGAAAGTGAGAGGTTCAAAGGAAATGACTGAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR TCA 90 bp TCTGTTGACTCTCATACATATTTGTGGGGTATAGAACCATCTAACTaGTCCTCAGTCATTTCCTTTGAACCTCTCACTTTCATATTTCAT +
Preference number: 1 (lower is better)
Translates to: SVDSHTYLWGIEPSN*SSVISFEPLTFIFH
Trigger: ATGAAATATGAAAGTGAGAGGTTCAAAGGAAATGACTGAGGATCAGTTAGATGGTTCTATACCCCACAAATATGTATGAGAGTCAACAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR TCA 90 bp AACAGCAAGGATGAATCAAAGGCTCGGGTTCCTCTGGGCACTATGGTCACGGCTTGGTCAGGGTACAACTaGCACGATTTCCAACAAAAC +
Preference number: 2 (lower is better)
Translates to: NSKDESKARVPLGTMVTAWSGYN*HDFQQN
Trigger: GTTTTGTTGGAAATCGTGTCAGTTGTACCCTGACCA...AGCCGTGACCATAGTGCCCAGAGGAACCCGAGCCTTTGATTCATCCTTGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR GCA 90 bp ATGACAGAAAGATTTTGCACGAAGGATGACACAGCTGCCTCAGTGGCATTGCCTCCCTGTAGCCACTGCTaGAGGGCAGGGTATATTCAT +
Preference number: 2 (lower is better)
Translates to: MTERFCTKDDTAASVALPPCSHC*RAGYIH
Trigger: ATGAATATACCCTGCCCTGCAGCAGTGGCTACAGGG...AGGCAATGCCACTGAGGCAGCTGTGTCATCCTTCGTGCAAAATCTTTCTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
3UTR-3UTR GCA 90 bp ATGATGACAGAAAGATTTTGCACGAAGGATGACACAGCTGCCTCAGTGGCATTGTTCCCCTGTAGCCACTaGTGCAGGGCAGGGTATATT +
Preference number: 2 (lower is better)
Translates to: MMTERFCTKDDTAASVALFPCSH*CRAGYI
Trigger: AATATACCCTGCCCTGCAGCAGTGGCTACAGGGGAA...CAATGCCACTGAGGCAGCTGTGTCATCCTTCGTGCAAAATCTTTCTGTCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475745.5
3UTR-3UTR TCA 90 bp GCAAGAATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAAGTCACTTTACCTCTCTaGGCCCCCATGCCCTCATCT +
Preference number: 2 (lower is better)
Translates to: ARIRLPSAMHPNCCGSEKVTLPL*APMPSS
Trigger: AGATGAGGGCATGGGGGCTCAGAGAGGTAAAGTGAC...TTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR CCA 90 bp TCTCCTGTAGTTGCTGAAGGAGAAAATCCACCCTTCGACAACCCGCAACCCTTAAAAGTTAGCTGGATGTaGTGGCAGGTGTCTGTAATT +
Preference number: 2 (lower is better)
Translates to: SPVVAEGENPPFDNPQPLKVSWM*WQVSVI
Trigger: AATTACAGACACCTGCCACCACATCCAGCTAACTTT...TAAGGGTTGCGGGTTGTCGAAGGGTGGATTTTCTCCTTCAGCAACTACAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371243.2
3UTR-3UTR GCA 90 bp GAGACACTCCCTAGGCCTCTCAAAACAGCAAGGATGAATCAAAGGCTCGGGTTCCAAAACCTACTCTTCTaGATTTATGGAGCACTTTCT +
Preference number: 2 (lower is better)
Translates to: ETLPRPLKTARMNQRLGFQNLLF*IYGALS
Trigger: AGAAAGTGCTCCATAAATGCAGAAGAGTAGGTTTTG...GAACCCGAGCCTTTGATTCATCCTTGCTGTTTTGAGAGGCCTAGGGAGTGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR GCA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCAGCGTCAACTCCTGCTaGTTTGTATGTCATCCAAAA +
Preference number: 2 (lower is better)
Translates to: GSWETHTSIALTNTRHTGSVNSC*FVCHPK
Trigger: TTTTGGATGACATACAAAGCAGCAGGAGTTGACGCT...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR GCA 90 bp ATCATATCTCCTGTAGTTGCTGAAGGAGAAAATCCACCCTTCGACAACCCGCAAGTCACCATGATCTCCTaGCTTCTTTCAAGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: IISPVVAEGENPPFDNPQVTMIS*LLSSFC
Trigger: GCAGAAACTTGAAAGAAGGCAGGAGATCATGGTGAC...TTGCGGGTTGTCGAAGGGTGGATTTTCTCCTTCAGCAACTACAGGAGATATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
3UTR-3UTR CCA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCGCTGTAGAAATGGTCTaGGAGACAAATGTCCTAAAA +
Preference number: 2 (lower is better)
Translates to: GSWETHTSIALTNTRHTGAVEMV*ETNVLK
Trigger: TTTTAGGACATTTGTCTCCCAGACCATTTCTACAGC...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR TCA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCTACCTCCCTGGAAGCTaGCAACCAAATTCTCCCTTA +
Preference number: 2 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSYLPGS*QPNSPL
Trigger: TAAGGGAGAATTTGGTTGTCAGCTTCCAGGGAGGTA...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CAA 90 bp TATGGAAGAGAAGTGTTGCTTCACATAGCGTCAACTCCTGCTGCTTaGTATGTCATCCAAAAGTGGCACTGGCTGTACAAGAAAATAACT +
Preference number: 2 (lower is better)
Translates to: YGREVLLHIASTPAA*YVIQKWHWLYKKIT
Trigger: AGTTATTTTCTTGTACAGCCAGTGCCACTTTTGGATGACATACAAAGCAGCAGGAGTTGACGCTATGTGAAGCAACACTTCTCTTCCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CAA 90 bp ACAGAAAGATTTTGCACGAAGGATGACACAGCTGCCTCAGTGGCATaGCCTACAATCATACTGAAATTCTTGTTCAGTTCTTCAAGCAGA +
Preference number: 2 (lower is better)
Translates to: TERFCTKDDTAASVA*PTIILKFLFSSSSR
Trigger: TCTGCTTGAAGAACTGAACAAGAATTTCAGTATGATTGTAGGCAATGCCACTGAGGCAGCTGTGTCATCCTTCGTGCAAAATCTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
3UTR-3UTR TCA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTTCAAAACAGCAAGGATaGATCAAAGGCTCGGGTTCC +
Preference number: 2 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNISKQQG*IKGSGS
Trigger: GGAACCCGAGCCTTTGATTCATCCTTGCTGTTTTGA...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR TCA 90 bp GACTACTGGGTTTTGAACTATGATGTATACATGTTATCTGTGCAAAGATATCTCCTGAGGTCAGGAGTTTaGGACCAGTGTGGCCAACAT +
Preference number: 2 (lower is better)
Translates to: DYWVLNYDVYMLSVQRYLLRSGV*DQCGQH
Trigger: ATGTTGGCCACACTGGTCTCAAACTCCTGACCTCAG...GAGATATCTTTGCACAGATAACATGTATACATCATAGTTCAAAACCCAGTAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
3UTR-3UTR GCA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCCCAGATTATTGGAAATaGCATGTGAATAATGCTGTT +
Preference number: 2 (lower is better)
Translates to: GSWETHTSIALTNTRHTGPDYWK*HVNNAV
Trigger: AACAGCATTATTCACATGGCATTTCCAATAATCTGG...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CAA 90 bp ATTTCCTTTGAACCTCTCACTTTCATATTTCATGTGTGCTGCACCTaGGTGCCTTGTGGAAGTCTAACTTTGAATTTCTCTCAGGTATGC +
Preference number: 2 (lower is better)
Translates to: ISFEPLTFIFHVCCT*VPCGSLTLNFSQVC
Trigger: GCATACCTGAGAGAAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATGAAATATGAAAGTGAGAGGTTCAAAGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR CCA 90 bp GAGCTATCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGTCTCATACATATTTGTaGGGTATAGAACCATCTAAC +
Preference number: 2 (lower is better)
Translates to: ELSELSEKSSLTKFEVKESHTYL*GIEPSN
Trigger: GTTAGATGGTTCTATACCCCACAAATATGTATGAGA...CTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGATAGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CAA 90 bp ATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTTaGGTCATTTTAAATAGTTTGGTAATTATGACTCCCAGTCGCCTA +
Preference number: 2 (lower is better)
Translates to: IHSSCMPTYSGKSNI*VILNSLVIMTPSRL
Trigger: TAGGCGACTGGGAGTCATAATTACCAAACTATTTAAAATGACCAAAATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR GCA 72 bp TCACTTTACCTCTCTGAGCCCCCATGCCCTCATCTCTaGACTAGGTCTGCCTTGACACTTTTGTTTGCAGGG +
Preference number: 3 (lower is better)
Translates to: SLYLSEPPCPHL*TRSALTLLFAG
Trigger: CCCTGCAAACAAAAGTGTCAAGGCAGACCTAGTGCAGAGATGAGGGCATGGGGGCTCAGAGAGGTAAAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR GCA 72 bp TCAAGCAGAGAGAGCACACAAGTCTCCCTGATGACCTaGCACCCAGAGGACTCACACTTGGCTGTGATGTTT +
Preference number: 3 (lower is better)
Translates to: SSRESTQVSLMT*HPEDSHLAVMF
Trigger: AAACATCACAGCCAAGTGTGAGTCCTCTGGGTGGCAGGTCATCAGGGAGACTTGTGTGCTCTCTCTGCTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475745.5
3UTR-3UTR CAA 90 bp ATCATATCTCCTGTAGTTGCTGAAGGAGAAAATCCACCCTTCGACAACCCGCAAAGGCAGGGGAATCTCTaGAACCCGGTAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: IISPVVAEGENPPFDNPQRQGNL*NPVGRG
Trigger: ACCTCTGCCTACCGGGTTCAAGAGATTCCCCTGCCT...TTGCGGGTTGTCGAAGGGTGGATTTTCTCCTTCAGCAACTACAGGAGATATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371243.2
3UTR-3UTR CAA 90 bp ATGACAGAAAGATTTTGCACGAAGGATGACACAGCTGCCTCAGTGGCATTGCCTCCAGAGGACTCACACTaGGCTGTGATGTTTCCCCTG +
Preference number: 3 (lower is better)
Translates to: MTERFCTKDDTAASVALPPEDSH*AVMFPL
Trigger: CAGGGGAAACATCACAGCCAAGTGTGAGTCCTCTGG...AGGCAATGCCACTGAGGCAGCTGTGTCATCCTTCGTGCAAAATCTTTCTGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475745.5
3UTR CCA 72 bp CATGTTCAATGGCTGACAGCAGTTCAGATGCACTGCTaGAGCCAACAACTTCATACCCAGCAACGATGCTTC +
Preference number: 3 (lower is better)
Translates to: HVQWLTAVQMHC*SQQLHTQQRCF
Trigger: GAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCTGAACTGCTGTCAGCCATTGAACATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487323.5
3UTR TCA 72 bp CAACCCTATCAGAGAGGACCTAAAAGAGCCCCATGCTaGCCTTCACTCTTGCATGTCTCACTATGGTTCATG +
Preference number: 3 (lower is better)
Translates to: QPYQRGPKRAPC*PSLLHVSLWFM
Trigger: CATGAACCATAGTGAGACATGCAAGAGTGAAGGTCAGCATGGGGCTCTTTTAGGTCCTCTCTGATAGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR TCA 72 bp CTCCGAATTATGAGGCATCATATCTCCTGTAGTTGCTaGAGGAGAAAATCCACCCTTCGACAACCCGCAACC +
Preference number: 3 (lower is better)
Translates to: LRIMRHHISCSC*RRKSTLRQPAT
Trigger: GGTTGCGGGTTGTCGAAGGGTGGATTTTCTCCTTCAGCAACTACAGGAGATATGATGCCTCATAATTCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
3UTR GCA 72 bp GAGGACCTAAAAGAGCCCCATGCTGACCTTCACTCTTaGATGTCTCACTATGGTTCATGGGAAACACACACA +
Preference number: 3 (lower is better)
Translates to: EDLKEPHADLHS*MSHYGSWETHT
Trigger: TGTGTGTGTTTCCCATGAACCATAGTGAGACATGCAAGAGTGAAGGTCAGCATGGGGCTCTTTTAGGTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR CAA 90 bp GAGACACTCCCTAGGCCTCTCAAAACAGCAAGGATGAATCAAAGGCTCGGGTTCTATGGAAGAGAAGTGTaGCTTCACATAGCGTCAACT +
Preference number: 3 (lower is better)
Translates to: ETLPRPLKTARMNQRLGFYGREV*LHIAST
Trigger: AGTTGACGCTATGTGAAGCAACACTTCTCTTCCATA...GAACCCGAGCCTTTGATTCATCCTTGCTGTTTTGAGAGGCCTAGGGAGTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR CAA 90 bp CATGTGTGCTGCACCTTGGTGCCTTGTGGAAGTCTAACTTTGAATTTCTCTCAGTCTGCCTTGACACTTTaGTTTGCAGGGTTTAGGACC +
Preference number: 3 (lower is better)
Translates to: HVCCTLVPCGSLTLNFSQSALTL*FAGFRT
Trigger: GGTCCTAAACCCTGCAAACAAAAGTGTCAAGGCAGA...CTGAGAGAAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR CAA 90 bp TCTCCTGTAGTTGCTGAAGGAGAAAATCCACCCTTCGACAACCCGCAACCCTTATCTGCCCTACTGCTATaGTTTTGTAGTTCTACTCAC +
Preference number: 3 (lower is better)
Translates to: SPVVAEGENPPFDNPQPLSALLL*FCSSTH
Trigger: GTGAGTAGAACTACAAAACAATAGCAGTAGGGCAGA...TAAGGGTTGCGGGTTGTCGAAGGGTGGATTTTCTCCTTCAGCAACTACAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371243.2
3UTR TCA 72 bp TATCTCACCCAAAGCCCCACTTCTGGCTCCGAATTATaGGGCATCATATCTCCTGTAGTTGCTGAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: YLTQSPTSGSEL*GIISPVVAEGE
Trigger: TTCTCCTTCAGCAACTACAGGAGATATGATGCCTCATAATTCGGAGCCAGAAGTGGGGCTTTGGGTGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
3UTR GCA 72 bp TGGAAGAGAAGTGTTGCTTCACATAGCGTCAACTCCTaGTGCTTTGTATGTCATCCAAAAGTGGCACTGGCT +
Preference number: 3 (lower is better)
Translates to: WKRSVASHSVNS*CFVCHPKVALA
Trigger: AGCCAGTGCCACTTTTGGATGACATACAAAGCAGCAGGAGTTGACGCTATGTGAAGCAACACTTCTCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR GCA 72 bp TTTTTCTTCCCTCTCCAACTGAGTCTTGTGTTGAGTTaGCTACTTGCGCTAGCACATCTTCCCTTGCTGGTT +
Preference number: 3 (lower is better)
Translates to: FFFPLQLSLVLS*LLALAHLPLLV
Trigger: AACCAGCAAGGGAAGATGTGCTAGCGCAAGTAGGCAACTCAACACAAGACTCAGTTGGAGAGGGAAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CCA 72 bp GCTGACCTTCACTCTTGCATGTCTCACTATGGTTCATaGGAAACACACACATCCATTGCCCTGACAAACACT +
Preference number: 3 (lower is better)
Translates to: ADLHSCMSHYGS*ETHTSIALTNT
Trigger: AGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACCATAGTGAGACATGCAAGAGTGAAGGTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR CAA 90 bp GGCTGTAGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTCCCTTATGCACTAGGTCTGCCTaGACACTTTTGTTTGCAGGG +
Preference number: 3 (lower is better)
Translates to: GCRNGLGDKCPKNPQFPLCTRSA*TLLFAG
Trigger: CCCTGCAAACAAAAGTGTCAAGGCAGACCTAGTGCA...TAAGGGAAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCTACAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR CAA 90 bp CATGTGTGCTGCACCTTGGTGCCTTGTGGAAGTCTAACTTTGAATTTCTCTCAGTCAACTCCTGCTGCTTaGTATGTCATCCAAAAGTGG +
Preference number: 3 (lower is better)
Translates to: HVCCTLVPCGSLTLNFSQSTPAA*YVIQKW
Trigger: CCACTTTTGGATGACATACAAAGCAGCAGGAGTTGA...CTGAGAGAAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR CAA 90 bp CATGTGTGCTGCACCTTGGTGCCTTGTGGAAGTCTAACTTTGAATTTCTCTCAGCCCAGCTGTCTTTATTaGCATAGCATGAAGGCTTTC +
Preference number: 3 (lower is better)
Translates to: HVCCTLVPCGSLTLNFSQPSCLY*HSMKAF
Trigger: GAAAGCCTTCATGCTATGCAAATAAAGACAGCTGGG...CTGAGAGAAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR CAA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCCATGTGTGCTGCACCTaGGTGCCTTGTGGAAGTCTA +
Preference number: 3 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSHVCCT*VPCGSL
Trigger: TAGACTTCCACAAGGCACCAAGGTGCAGCACACATG...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR CAA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCCTTCTCTCACTAAATTaGAGGTCAAGGAGCAGACAT +
Preference number: 3 (lower is better)
Translates to: GSWETHTSIALTNTRHTGLLSLN*RSRSRH
Trigger: ATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAG...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR TCA 72 bp TTGCCGAATGATGACAGAAAGATTTTGCACGAAGGATaGCACAGCTGCCTCAGTGGCATTGCCTACAATCAT +
Preference number: 3 (lower is better)
Translates to: LPNDDRKILHEG*HSCLSGIAYNH
Trigger: ATGATTGTAGGCAATGCCACTGAGGCAGCTGTGTCATCCTTCGTGCAAAATCTTTCTGTCATCATTCGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
3UTR GCA 72 bp AAGAGAAGTGTTGCTTCACATAGCGTCAACTCCTGCTaGTTTGTATGTCATCCAAAAGTGGCACTGGCTGTA +
Preference number: 3 (lower is better)
Translates to: KRSVASHSVNSC*FVCHPKVALAV
Trigger: TACAGCCAGTGCCACTTTTGGATGACATACAAAGCAGCAGGAGTTGACGCTATGTGAAGCAACACTTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CCA 72 bp GAGATAGGGCTGCCTTCACATGGTGTCAGGGTTCTCTaGATAGTAATTGTGTGTAATAAGAGAGGGAGCATT +
Preference number: 3 (lower is better)
Translates to: EIGLPSHGVRVL*IVIVCNKRGSI
Trigger: AATGCTCCCTCTCTTATTACACACAATTACTATCCAGAGAACCCTGACACCATGTGAAGGCAGCCCTATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CCA 72 bp ATCTGTGCAAAGATATCTCACCCAAAGCCCCACTTCTaGCTCCGAATTATGAGGCATCATATCTCCTGTAGT +
Preference number: 3 (lower is better)
Translates to: ICAKISHPKPHF*LRIMRHHISCS
Trigger: ACTACAGGAGATATGATGCCTCATAATTCGGAGCCAGAAGTGGGGCTTTGGGTGAGATATCTTTGCACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
3UTR-3UTR CAA 90 bp ATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAATCTGAGCTCCTTCTCTCACTTTaGTGGGTAGGTAGAGTGAGA +
Preference number: 3 (lower is better)
Translates to: IRLPSAMHPNCCGSEKSELLLSL*WVGRVR
Trigger: TCTCACTCTACCTACCCACAAAAGTGAGAGAAGGAG...CTCAGATTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR TCA 72 bp ACTATGGTTCATGGGAAACACACACATCCATTGCCCTaGCAAACACTAGACATACAGGCTATTCTCAACACA +
Preference number: 3 (lower is better)
Translates to: TMVHGKHTHPLP*QTLDIQAILNT
Trigger: TGTGTTGAGAATAGCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACCATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR GCA 72 bp CACAATTCTAGGCAAGAATCAGACTTCCATCAGCCATaGATCCTAATTGTTGTGGTTCTGAGAAATCTGAGC +
Preference number: 3 (lower is better)
Translates to: HNSRQESDFHQP*ILIVVVLRNLS
Trigger: GCTCAGATTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGCCTAGAATTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CCA 72 bp ACTCCTGCTGCTTTGTATGTCATCCAAAAGTGGCACTaGCTGTACAAGAAAATAACTTCCACAAAGTGCCTA +
Preference number: 3 (lower is better)
Translates to: TPAALYVIQKWH*LYKKITSTKCL
Trigger: TAGGCACTTTGTGGAAGTTATTTTCTTGTACAGCCAGTGCCACTTTTGGATGACATACAAAGCAGCAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR CAA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTCTGCACCTTGGTGCCTaGTGGAAGTCTAACTTTGAA +
Preference number: 3 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNILHLGA*WKSNFE
Trigger: TTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAG...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR GCA 72 bp ATTTCCTTTGAACCTCTCACTTTCATATTTCATGTGTaGTGCACCTTGGTGCCTTGTGGAAGTCTAACTTTG +
Preference number: 3 (lower is better)
Translates to: ISFEPLTFIFHV*CTLVPCGSLTL
Trigger: CAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATGAAATATGAAAGTGAGAGGTTCAAAGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR CAA 90 bp GCAAGAATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAATTTTCAAGGCTTTTATaGGCTGTAGAAATGGTCTGG +
Preference number: 3 (lower is better)
Translates to: ARIRLPSAMHPNCCGSEKFSRLL*AVEMVW
Trigger: CCAGACCATTTCTACAGCCAATAAAAGCCTTGAAAA...TTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR-3UTR CAA 90 bp CACTGGCTGTACAAGAAAATAACTTCCACAAAGTGCCTATGGTGTATTATGAAACTGGCTTCACAATCTTaGGCAAGTCACTTTACCTCT +
Preference number: 3 (lower is better)
Translates to: HWLYKKITSTKCLWCIMKLASQS*ASHFTS
Trigger: AGAGGTAAAGTGACTTGCCAAAGATTGTGAAGCCAG...TTTCATAATACACCATAGGCACTTTGTGGAAGTTATTTTCTTGTACAGCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR TCA 72 bp GAAAATAAGGATGTTTTAAGGTACCTCCCTGGAAGCTaGCAACCAAATTCTCCCTTAATTTCTCTCTTACAT +
Preference number: 3 (lower is better)
Translates to: ENKDVLRYLPGS*QPNSPLISLLH
Trigger: ATGTAAGAGAGAAATTAAGGGAGAATTTGGTTGTCAGCTTCCAGGGAGGTACCTTAAAACATCCTTATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp AACAGCAAGGATGAATCAAAGGCTCGGGTTCCTCTGGGCACTATGGTCACGGCTAGGCTCGGGTTCCTCTaGGCACTATGGTCACGGCTG +
Preference number: 4 (lower is better)
Translates to: NSKDESKARVPLGTMVTARLGFL*ALWSRL
Trigger: CAGCCGTGACCATAGTGCCCAGAGGAACCCGAGCCT...AGCCGTGACCATAGTGCCCAGAGGAACCCGAGCCTTTGATTCATCCTTGCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp CCACCCAGAGGACTCACACTTGGCTGTGATGTTTCCCCTGTAGCCACTGCTGCAACTCACACTTGGCTGTaGTGTTTCCCCTGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: PPRGLTLGCDVSPVATAATHTWL*CFPCSH
Trigger: GTGGCTACAGGGGAAACATCACAGCCAAGTGTGAGT...TGCAGCAGTGGCTACAGGGGAAACATCACAGCCAAGTGTGAGTCCTCTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR GCA 90 bp CCACCCAGAGGACTCACACTTGGCTGTGATGTTTCCCCTGTAGCCACTGCTGCACCCTGTAGCCACTGCTaGAGGGCAGGGTATATTCAT +
Preference number: 4 (lower is better)
Translates to: PPRGLTLGCDVSPVATAAPCSHC*RAGYIH
Trigger: ATGAATATACCCTGCCCTGCAGCAGTGGCTACAGGG...TGCAGCAGTGGCTACAGGGGAAACATCACAGCCAAGTGTGAGTCCTCTGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR GCA 90 bp GATGACCTGCCACCCAGAGGACTCACACTTGGCTGTGATGTTTCCCCTGTAGCCTTCACAGCTTGGGAGTaGTCCAGCCGTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: DDLPPRGLTLGCDVSPVAFTAWE*SSRVKV
Trigger: TACCTTCACACGGCTGGAGCACTCCCAAGCTGTGAA...GGCTACAGGGGAAACATCACAGCCAAGTGTGAGTCCTCTGGGTGGCAGGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR GCA 90 bp GATGACCTGCCACCCAGAGGACTCACACTTGGCTGTGATGTTTCCCCTGTAGCCTCTTCACAGGTACACTaGAGGACTCCATTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: DDLPPRGLTLGCDVSPVASSQVH*RTPFRL
Trigger: CAGCCTGAATGGAGTCCTGCAGTGTACCTGTGAAGA...GGCTACAGGGGAAACATCACAGCCAAGTGTGAGTCCTCTGGGTGGCAGGTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR TCA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCTCTTCCCCACGCGGATaGTGGTGGCCTTGTCATCCC +
Preference number: 4 (lower is better)
Translates to: GSWETHTSIALTNTRHTGSSPRG*WWPCHP
Trigger: GGGATGACAAGGCCACCATCATCCGCGTGGGGAAGA...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp CATGTGTGCTGCACCTTGGTGCCTTGTGGAAGTCTAACTTTGAATTTCTCTCAGGCAGAGGGGTCAGAATaGGGAGGCTCTTCCCCACGC +
Preference number: 4 (lower is better)
Translates to: HVCCTLVPCGSLTLNFSQAEGSE*GGSSPR
Trigger: GCGTGGGGAAGAGCCTCCTCATTCTGACCCCTCTGC...CTGAGAGAAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GAGACACTCCCTAGGCCTCTCAAAACAGCAAGGATGAATCAAAGGCTCGGGTTCGAGAAGGAGGTCAAGTaGGTACATTGGCACGTCACG +
Preference number: 4 (lower is better)
Translates to: ETLPRPLKTARMNQRLGFEKEVK*VHWHVT
Trigger: CGTGACGTGCCAATGTACTCACTTGACCTCCTTCTC...GAACCCGAGCCTTTGATTCATCCTTGCTGTTTTGAGAGGCCTAGGGAGTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp GAGACACTCCCTAGGCCTCTCAAAACAGCAAGGATGAATCAAAGGCTCGGGTTCAGGGCTGCCTTCACATaGTGTCAGGGTTCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: ETLPRPLKTARMNQRLGFRAAFT*CQGSLD
Trigger: ATCCAGAGAACCCTGACACCATGTGAAGGCAGCCCT...GAACCCGAGCCTTTGATTCATCCTTGCTGTTTTGAGAGGCCTAGGGAGTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GAGACACTCCCTAGGCCTCTCAAAACAGCAAGGATGAATCAAAGGCTCGGGTTCTTGAATTGGACACCCTaGAATGGCTGGCCAGTGACA +
Preference number: 4 (lower is better)
Translates to: ETLPRPLKTARMNQRLGFLNWTP*NGWPVT
Trigger: TGTCACTGGCCAGCCATTTCAGGGTGTCCAATTCAA...GAACCCGAGCCTTTGATTCATCCTTGCTGTTTTGAGAGGCCTAGGGAGTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TTGTTCAGTTCTTCAAGCAGAGAGAGCACACAAGTCTCCCTGATGACCTGCCACCTGGGCGAAATTGGGTaGCCTGAACCGACTCAAAAC +
Preference number: 4 (lower is better)
Translates to: LFSSSSRESTQVSLMTCHLGEIG*PEPTQN
Trigger: GTTTTGAGTCGGTTCAGGTCACCCAATTTCGCCCAG...GTGGCAGGTCATCAGGGAGACTTGTGTGCTCTCTCTGCTTGAAGAACTGAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR GCA 90 bp AACAGCAAGGATGAATCAAAGGCTCGGGTTCCTCTGGGCACTATGGTCACGGCTGGGCTATGTTCACCATaGAAATACGACGTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: NSKDESKARVPLGTMVTAGLCSP*KYDVCE
Trigger: CTCACACACGTCGTATTTGCATGGTGAACATAGCCC...AGCCGTGACCATAGTGCCCAGAGGAACCCGAGCCTTTGATTCATCCTTGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp GAGACACTCCCTAGGCCTCTCAAAACAGCAAGGATGAATCAAAGGCTCGGGTTCTCTTCACAGGTACACTaGAGGACTCCATTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ETLPRPLKTARMNQRLGFSSQVH*RTPFRL
Trigger: CAGCCTGAATGGAGTCCTGCAGTGTACCTGTGAAGA...GAACCCGAGCCTTTGATTCATCCTTGCTGTTTTGAGAGGCCTAGGGAGTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GAGACACTCCCTAGGCCTCTCAAAACAGCAAGGATGAATCAAAGGCTCGGGTTCCACGTCACGATGTCTTaGGTTTCATTCACTAGGTGG +
Preference number: 4 (lower is better)
Translates to: ETLPRPLKTARMNQRLGFHVTMS*VSFTRW
Trigger: CCACCTAGTGAATGAAACTCAAGACATCGTGACGTG...GAACCCGAGCCTTTGATTCATCCTTGCTGTTTTGAGAGGCCTAGGGAGTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCGCCTCCAGAGCTTTGTaGGAACTAGCAGCACCACAA +
Preference number: 4 (lower is better)
Translates to: GSWETHTSIALTNTRHTGASRAL*ELAAPQ
Trigger: TTGTGGTGCTGCTAGTTCTCACAAAGCTCTGGAGGC...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GGCTGTAGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTCCCTTATTCCAAAGCCCCAGGTaGGCCCTAGCAGAGGGGTCA +
Preference number: 4 (lower is better)
Translates to: GCRNGLGDKCPKNPQFPLFQSPR*ALAEGS
Trigger: TGACCCCTCTGCTAGGGCTCACCTGGGGCTTTGGAA...TAAGGGAAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCTACAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GCCACTGCTGCAGGGCAGGGTATATTCATCATCCTTGGACCCAAATCCAAAGACCTGAGGTTGTTGAGATaGCATTCACAGCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: ATAAGQGIFIILGPKSKDLRLLR*HSQLGS
Trigger: ACTCCCAAGCTGTGAATGTCATCTCAACAACCTCAG...GTCTTTGGATTTGGGTCCAAGGATGATGAATATACCCTGCCCTGCAGCAGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR TCA 90 bp TGCAAAGATATCTCACCCAAAGCCCCACTTCTGGCTCCGAATTATGAGGCATCACTGAGGTCAGGAGTTTaGGACCAGTGTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: CKDISPKAPLLAPNYEASLRSGV*DQCGQH
Trigger: ATGTTGGCCACACTGGTCTCAAACTCCTGACCTCAG...TGATGCCTCATAATTCGGAGCCAGAAGTGGGGCTTTGGGTGAGATATCTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR GCA 90 bp AGATGCACTGCTGGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCTTTCACAGCTTGGGAGTaGTCCAGCCGTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: RCTAGANNFIPSNDASISFTAWE*SSRVKV
Trigger: TACCTTCACACGGCTGGAGCACTCCCAAGCTGTGAA...AGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487323.5
CDS-3UTR GCA 90 bp AACAGCAAGGATGAATCAAAGGCTCGGGTTCCTCTGGGCACTATGGTCACGGCTCATAGCGTCAACTCCTaGTGCTTTGTATGTCATCCA +
Preference number: 4 (lower is better)
Translates to: NSKDESKARVPLGTMVTAHSVNS*CFVCHP
Trigger: TGGATGACATACAAAGCAGCAGGAGTTGACGCTATG...AGCCGTGACCATAGTGCCCAGAGGAACCCGAGCCTTTGATTCATCCTTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp ATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAATCTGAGCCCAGGAAGCCACCGTaGCCGTCAGTGAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: IRLPSAMHPNCCGSEKSEPRKPP*PSVKVK
Trigger: CTTCACCTTCACTGACGGCCACGGTGGCTTCCTGGG...CTCAGATTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp ATTCTTGTTCAGTTCTTCAAGCAGAGAGAGCACACAAGTCTCCCTGATGACCTGATTTTGCACGAAGGATaGCACAGCTGCCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: ILVQFFKQREHTSLPDDLILHEG*HSCLSG
Trigger: GCCACTGAGGCAGCTGTGTCATCCTTCGTGCAAAAT...CAGGTCATCAGGGAGACTTGTGTGCTCTCTCTGCTTGAAGAACTGAACAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR TCA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCTCCCAAAACACACAATaGGGCTGGCTCAGGTTTGAC +
Preference number: 4 (lower is better)
Translates to: GSWETHTSIALTNTRHTGSQNTQ*GWLRFD
Trigger: GTCAAACCTGAGCCAGCCTCATTGTGTGTTTTGGGA...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCAAATGCTGGGCCATGTaGTGGAACACGAGGATGATC +
Preference number: 4 (lower is better)
Translates to: GSWETHTSIALTNTRHTGKCWAM*WNTRMI
Trigger: GATCATCCTCGTGTTCCATCACATGGCCCAGCATTT...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GCAAGAATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAATCACCTCCCACTTCTTaGTGCTGGGTTCCCTCCACC +
Preference number: 4 (lower is better)
Translates to: ARIRLPSAMHPNCCGSEKSPPTS*CWVPST
Trigger: GGTGGAGGGAACCCAGCATCAAGAAGTGGGAGGTGA...TTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp AGATGCACTGCTGGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCTCTGTCCGAAATTGGGTaGCCTGAACCGACTCAAAAC +
Preference number: 4 (lower is better)
Translates to: RCTAGANNFIPSNDASISLSEIG*PEPTQN
Trigger: GTTTTGAGTCGGTTCAGGTCACCCAATTTCGGACAG...AGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487323.5
CDS-3UTR GCA 90 bp CATGTGTGCTGCACCTTGGTGCCTTGTGGAAGTCTAACTTTGAATTTCTCTCAGTTCCCCTGTAGCCACTaGTGCAGGGCAGGGTATATT +
Preference number: 4 (lower is better)
Translates to: HVCCTLVPCGSLTLNFSQFPCSH*CRAGYI
Trigger: AATATACCCTGCCCTGCAGCAGTGGCTACAGGGGAA...CTGAGAGAAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp TGCAAAGATATCTCACCCAAAGCCCCACTTCTGGCTCCGAATTATGAGGCATCATCTTCACAGGTACACTaGAGGACTCCATTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CKDISPKAPLLAPNYEASSSQVH*RTPFRL
Trigger: CAGCCTGAATGGAGTCCTGCAGTGTACCTGTGAAGA...TGATGCCTCATAATTCGGAGCCAGAAGTGGGGCTTTGGGTGAGATATCTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR GCA 90 bp AGATGCACTGCTGGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCTTCTTCACAGGTACACTaGAGGACTCCATTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RCTAGANNFIPSNDASISSSQVH*RTPFRL
Trigger: CAGCCTGAATGGAGTCCTGCAGTGTACCTGTGAAGA...AGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487323.5
CDS-3UTR CCA 90 bp GAGACACTCCCTAGGCCTCTCAAAACAGCAAGGATGAATCAAAGGCTCGGGTTCAACTTTCATTTTCCCTaGACTGAACAGCAGCAGTCG +
Preference number: 4 (lower is better)
Translates to: ETLPRPLKTARMNQRLGFNFHFP*TEQQQS
Trigger: CGACTGCTGCTGTTCAGTCCAGGGAAAATGAAAGTT...GAACCCGAGCCTTTGATTCATCCTTGCTGTTTTGAGAGGCCTAGGGAGTGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp AAGTTTCTGCCCTACTGCTATTGTTTTGTAGTTCTACTCACTGACCCACAGTTTCCCAGGAAGCCACCGTaGCCGTCAGTGAAGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KFLPYCYCFVVLLTDPQFPRKPP*PSVKVK
Trigger: CTTCACCTTCACTGACGGCCACGGTGGCTTCCTGGG...AAACTGTGGGTCAGTGAGTAGAACTACAAAACAATAGCAGTAGGGCAGAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR TCA 90 bp TCTGCCTTGACACTTTTGTTTGCAGGGTTTAGGACCAGATGGAAGTGCCTTGTACCAGTCCCACATAGGTaGTCCATTTTACAACGGGGA +
Preference number: 4 (lower is better)
Translates to: SALTLLFAGFRTRWKCLVPVPHR*SILQRG
Trigger: TCCCCGTTGTAAAATGGATCACCTATGTGGGACTGG...TACAAGGCACTTCCATCTGGTCCTAAACCCTGCAAACAAAAGTGTCAAGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp AGATGCACTGCTGGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCTCTGAGGTTGTTGAGATaGCATTCACAGCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: RCTAGANNFIPSNDASISLRLLR*HSQLGS
Trigger: ACTCCCAAGCTGTGAATGTCATCTCAACAACCTCAG...AGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487323.5
CDS-3UTR TCA 90 bp TCTCCTGTAGTTGCTGAAGGAGAAAATCCACCCTTCGACAACCCGCAACCCTTAACATTCGAAATTGGGTaGCCTGAACCGACTCAAAAC +
Preference number: 4 (lower is better)
Translates to: SPVVAEGENPPFDNPQPLTFEIG*PEPTQN
Trigger: GTTTTGAGTCGGTTCAGGTCACCCAATTTCGAATGT...TAAGGGTTGCGGGTTGTCGAAGGGTGGATTTTCTCCTTCAGCAACTACAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR GCA 90 bp AGATGCACTGCTGGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCTGCAGTTCAGATGCACTaGTGGAGCCAACAACTTCAT +
Preference number: 4 (lower is better)
Translates to: RCTAGANNFIPSNDASISAVQMH*WSQQLH
Trigger: ATGAAGTTGTTGGCTCCAGCAGTGCATCTGAACTGC...AGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487323.5
CDS-3UTR GCA 90 bp CATGTGTGCTGCACCTTGGTGCCTTGTGGAAGTCTAACTTTGAATTTCTCTCAGAGCCACAATAGCCAGTaGAGGGACAACAAAAGCCAG +
Preference number: 4 (lower is better)
Translates to: HVCCTLVPCGSLTLNFSQSHNSQ*RDNKSQ
Trigger: CTGGCTTTTGTTGTCCCTGCACTGGCTATTGTGGCT...CTGAGAGAAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp GATGTATACATGTTATCTGTGCAAAGATATCTCACCCAAAGCCCCACTTCTGGCTTCACAGCTTGGGAGTaGTCCAGCCGTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: DVYMLSVQRYLTQSPTSGFTAWE*SSRVKV
Trigger: TACCTTCACACGGCTGGAGCACTCCCAAGCTGTGAA...GCCAGAAGTGGGGCTTTGGGTGAGATATCTTTGCACAGATAACATGTATACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR CCA 90 bp AGATGCACTGCTGGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCTGTTCAGATGCACTGCTaGAGCCAACAACTTCATACC +
Preference number: 4 (lower is better)
Translates to: RCTAGANNFIPSNDASISVQMHC*SQQLHT
Trigger: GGTATGAAGTTGTTGGCTCCAGCAGTGCATCTGAAC...AGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487323.5
CDS-3UTR CCA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCCTAGTAACCGTGAGCTaGCATACTTTTCTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: GSWETHTSIALTNTRHTGLVTVS*HTFLPA
Trigger: TGCGGGAAGAAAAGTATGCCAGCTCACGGTTACTAG...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTCCTTCCACCCCACCTTaGACACGGAGGTTTCTGGCC +
Preference number: 4 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNIPSTPP*TRRFLA
Trigger: GGCCAGAAACCTCCGTGTCCAAGGTGGGGTGGAAGG...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GCAAGAATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAAACTCACACTTGGCTGTaGTGTTTCCCCTGTAGCCAC +
Preference number: 4 (lower is better)
Translates to: ARIRLPSAMHPNCCGSEKTHTWL*CFPCSH
Trigger: GTGGCTACAGGGGAAACATCACAGCCAAGTGTGAGT...TTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp AAGTTTCTGCCCTACTGCTATTGTTTTGTAGTTCTACTCACTGACCCACAGTTTTCATTTTCCCTGGACTaGACAGCAGCAGTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: KFLPYCYCFVVLLTDPQFSFSLD*TAAVGC
Trigger: GCACCCGACTGCTGCTGTTCAGTCCAGGGAAAATGA...AAACTGTGGGTCAGTGAGTAGAACTACAAAACAATAGCAGTAGGGCAGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR TCA 90 bp TCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATCATTTTCCCTGGACTaGACAGCAGCAGTCGGGTGC +
Preference number: 4 (lower is better)
Translates to: SELSEKSSLTKFEVKEQTSFSLD*TAAVGC
Trigger: GCACCCGACTGCTGCTGTTCAGTCCAGGGAAAATGA...TGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GAGACACTCCCTAGGCCTCTCAAAACAGCAAGGATGAATCAAAGGCTCGGGTTCGGTGAACTGTGTAACTaGCCTCAGAAAGATTTACTA +
Preference number: 4 (lower is better)
Translates to: ETLPRPLKTARMNQRLGFGELCN*PQKDLL
Trigger: TAGTAAATCTTTCTGAGGTCAGTTACACAGTTCACC...GAACCCGAGCCTTTGATTCATCCTTGCTGTTTTGAGAGGCCTAGGGAGTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TCTGCCTTGACACTTTTGTTTGCAGGGTTTAGGACCAGATGGAAGTGCCTTGTATACCTCCCTGGAAGCTaGCAACCAAATTCTCCCTTA +
Preference number: 4 (lower is better)
Translates to: SALTLLFAGFRTRWKCLVYLPGS*QPNSPL
Trigger: TAAGGGAGAATTTGGTTGTCAGCTTCCAGGGAGGTA...TACAAGGCACTTCCATCTGGTCCTAAACCCTGCAAACAAAAGTGTCAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp TCTGCCTTGACACTTTTGTTTGCAGGGTTTAGGACCAGATGGAAGTGCCTTGTAGTTGAGTTGCCTACTTaGGCTAGCACATCTTCCCTT +
Preference number: 4 (lower is better)
Translates to: SALTLLFAGFRTRWKCLVVELPT*ASTSSL
Trigger: AAGGGAAGATGTGCTAGCGCAAGTAGGCAACTCAAC...TACAAGGCACTTCCATCTGGTCCTAAACCCTGCAAACAAAAGTGTCAAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp AACAGCAAGGATGAATCAAAGGCTCGGGTTCCTCTGGGCACTATGGTCACGGCTTACATTCCAGTTGTATaGCAACATACTCAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: NSKDESKARVPLGTMVTAYIPVV*QHTQVR
Trigger: TCTTACCTGAGTATGTTGGCATACAACTGGAATGTA...AGCCGTGACCATAGTGCCCAGAGGAACCCGAGCCTTTGATTCATCCTTGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp GAGCTATCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGAAGGGTTCACCGTaGTGTCCACTGTGGCACCAA +
Preference number: 4 (lower is better)
Translates to: ELSELSEKSSLTKFEVKEQKGSP*CPLWHQ
Trigger: TTGGTGCCACAGTGGACACCACGGTGAACCCTTCTG...CTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGATAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp AACAGCAAGGATGAATCAAAGGCTCGGGTTCCTCTGGGCACTATGGTCACGGCTAAGGCTTTGAGAATTTaGGTTTGGCAGATAAATCTG +
Preference number: 4 (lower is better)
Translates to: NSKDESKARVPLGTMVTAKALRI*VWQINL
Trigger: CAGATTTATCTGCCAAACCCAAATTCTCAAAGCCTT...AGCCGTGACCATAGTGCCCAGAGGAACCCGAGCCTTTGATTCATCCTTGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp GCAAGAATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAATTCCTCTGGGCACTATaGTCACGGCTGAAACTCAGG +
Preference number: 4 (lower is better)
Translates to: ARIRLPSAMHPNCCGSEKFLWAL*SRLKLR
Trigger: CCTGAGTTTCAGCCGTGACCATAGTGCCCAGAGGAA...TTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CAA 72 bp GAAGTGTTGCTTCACATAGCGTCAACTCCTGCTGCTTaGTATGTCATCCAAAAGTGGCACTGGCTGTACAAG +
Preference number: 4 (lower is better)
Translates to: EVLLHIASTPAA*YVIQKWHWLYK
Trigger: CTTGTACAGCCAGTGCCACTTTTGGATGACATACAAAGCAGCAGGAGTTGACGCTATGTGAAGCAACACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CAA 72 bp CCACCACTAACTAGAAGTTCCCCCAGCTGTCTTTATTaGCATAGCATGAAGGCTTTCCATGTCAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: PPLTRSSPSCLY*HSMKAFHVRRL
Trigger: TAGCCTCCTGACATGGAAAGCCTTCATGCTATGCAAATAAAGACAGCTGGGGGAACTTCTAGTTAGTGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CAA 72 bp ATTTTTCTTCCCTCTCCAACTGAGTCTTGTGTTGAGTaGCCTACTTGCGCTAGCACATCTTCCCTTGCTGGT +
Preference number: 4 (lower is better)
Translates to: IFLPSPTESCVE*PTCASTSSLAG
Trigger: ACCAGCAAGGGAAGATGTGCTAGCGCAAGTAGGCAACTCAACACAAGACTCAGTTGGAGAGGGAAGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TCTGCCTTGACACTTTTGTTTGCAGGGTTTAGGACCAGATGGAAGTGCCTTGTAAGAGGGGACAAAAGGTaGCATCAATATGGAGAAGGA +
Preference number: 4 (lower is better)
Translates to: SALTLLFAGFRTRWKCLVRGDKR*HQYGEG
Trigger: TCCTTCTCCATATTGATGTCACCTTTTGTCCCCTCT...TACAAGGCACTTCCATCTGGTCCTAAACCCTGCAAACAAAAGTGTCAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GATGTATACATGTTATCTGTGCAAAGATATCTCACCCAAAGCCCCACTTCTGGCCTGAGGTTGTTGAGATaGCATTCACAGCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: DVYMLSVQRYLTQSPTSGLRLLR*HSQLGS
Trigger: ACTCCCAAGCTGTGAATGTCATCTCAACAACCTCAG...GCCAGAAGTGGGGCTTTGGGTGAGATATCTTTGCACAGATAACATGTATACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR TCA 90 bp TCTGCCTTGACACTTTTGTTTGCAGGGTTTAGGACCAGATGGAAGTGCCTTGTATGGTCAGGGTACAACTaGCACGATTTCCAACAAAAC +
Preference number: 4 (lower is better)
Translates to: SALTLLFAGFRTRWKCLVWSGYN*HDFQQN
Trigger: GTTTTGTTGGAAATCGTGTCAGTTGTACCCTGACCA...TACAAGGCACTTCCATCTGGTCCTAAACCCTGCAAACAAAAGTGTCAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCCCAGGTGGTCATTTGTaGCTCCTTCCTCATCCCACA +
Preference number: 4 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSPGGHL*LLPHPT
Trigger: TGTGGGATGAGGAAGGAGTCACAAATGACCACCTGG...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCCCCTGTAGCCACTGCTaGAGGGCAGGGTATATTCAT +
Preference number: 4 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSPCSHC*RAGYIH
Trigger: ATGAATATACCCTGCCCTGCAGCAGTGGCTACAGGG...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCACAGAGATGAAATATTaGTCAGAATCGACACCACCG +
Preference number: 4 (lower is better)
Translates to: GSWETHTSIALTNTRHTGTEMKY*SESTPP
Trigger: CGGTGGTGTCGATTCTGAGCAATATTTCATCTCTGT...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp TCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCACAGCTTGGGAGTaGTCCAGCCGTGTGAAGGTA +
Preference number: 4 (lower is better)
Translates to: SELSEKSSLTKFEVKEQTFTAWE*SSRVKV
Trigger: TACCTTCACACGGCTGGAGCACTCCCAAGCTGTGAA...TGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp CACTGGCTGTACAAGAAAATAACTTCCACAAAGTGCCTATGGTGTATTATGAAACTCTCTGAGCCCCCATaGCCTCATCTCTGCACTAGG +
Preference number: 4 (lower is better)
Translates to: HWLYKKITSTKCLWCIMKLSEPP*PHLCTR
Trigger: CCTAGTGCAGAGATGAGGGCATGGGGGCTCAGAGAG...TTTCATAATACACCATAGGCACTTTGTGGAAGTTATTTTCTTGTACAGCCAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp TCTCCTGTAGTTGCTGAAGGAGAAAATCCACCCTTCGACAACCCGCAACCCTTACCTTCAGTATACTTGTaGCTCAATCACTTCTTATGC +
Preference number: 4 (lower is better)
Translates to: SPVVAEGENPPFDNPQPLPSVYL*LNHFLC
Trigger: GCATAAGAAGTGATTGAGCCACAAGTATACTGAAGG...TAAGGGTTGCGGGTTGTCGAAGGGTGGATTTTCTCCTTCAGCAACTACAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR CCA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCTTTAAGGTACCTCCCTaGAAGCTGACAACCAAATTC +
Preference number: 4 (lower is better)
Translates to: GSWETHTSIALTNTRHTGFKVPP*KLTTKF
Trigger: GAATTTGGTTGTCAGCTTCCAGGGAGGTACCTTAAA...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp AGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTCCCTTAACTGGCCCTCATCCCACAATCTaGCTTCACCTCCCACTTCTT +
Preference number: 4 (lower is better)
Translates to: RNGLGDKCPKNPQFPLTGPHPTI*LHLPLL
Trigger: AAGAAGTGGGAGGTGAAGCCAGATTGTGGGATGAGG...GCCAGTTAAGGGAAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp CACTGGCTGTACAAGAAAATAACTTCCACAAAGTGCCTATGGTGTATTATGAAAGGACACGGAGGTTTCTaGCCTCCCTTTCCCCAAGGT +
Preference number: 4 (lower is better)
Translates to: HWLYKKITSTKCLWCIMKGHGGF*PPFPQG
Trigger: ACCTTGGGGAAAGGGAGGCCAGAAACCTCCGTGTCC...TTTCATAATACACCATAGGCACTTTGTGGAAGTTATTTTCTTGTACAGCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp TTCAAGTTTCTGCCCTACTGCTATTGTTTTGTAGTTCTACTCACTGACCCACAGCCAAAGCCCCACTTCTaGCTCCGAATTATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: FKFLPYCYCFVVLLTDPQPKPHF*LRIMRH
Trigger: ATGCCTCATAATTCGGAGCCAGAAGTGGGGCTTTGG...CTGTGGGTCAGTGAGTAGAACTACAAAACAATAGCAGTAGGGCAGAAACTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR TCA 90 bp AGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTCCCTTAACTGGCAGGCAGACAACTTGTTaGACAGAAGTTGTCGCAGCT +
Preference number: 4 (lower is better)
Translates to: RNGLGDKCPKNPQFPLTGRQTTC*TEVVAA
Trigger: AGCTGCGACAACTTCTGTTCAACAAGTTGTCTGCCT...GCCAGTTAAGGGAAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GAGCTATCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGGAAAGTATCAGTATCTaGGCCACAGCAGCTCACTGG +
Preference number: 4 (lower is better)
Translates to: ELSELSEKSSLTKFEVKEESISI*ATAAHW
Trigger: CCAGTGAGCTGCTGTGGCTCAGATACTGATACTTTC...CTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGATAGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GCAAGAATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAACGGGTGCATAGTCTGTaGCTGGTGATTTATCTCTTC +
Preference number: 4 (lower is better)
Translates to: ARIRLPSAMHPNCCGSEKRVHSL*LVIYLF
Trigger: GAAGAGATAAATCACCAGTCACAGACTATGCACCCG...TTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TTTATTGGCTGTAGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTGTCACTTTACCTCTCTaGGCCCCCATGCCCTCATCT +
Preference number: 4 (lower is better)
Translates to: FIGCRNGLGDKCPKNPQFVTLPL*APMPSS
Trigger: AGATGAGGGCATGGGGGCTCAGAGAGGTAAAGTGAC...AAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCTACAGCCAATAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp AAGTTTCTGCCCTACTGCTATTGTTTTGTAGTTCTACTCACTGACCCACAGTTTCCTAGATTGTGCCATTaGACTCCAACTTGGGCGACA +
Preference number: 4 (lower is better)
Translates to: KFLPYCYCFVVLLTDPQFPRLCH*TPTWAT
Trigger: TGTCGCCCAAGTTGGAGTGCAATGGCACAATCTAGG...AAACTGTGGGTCAGTGAGTAGAACTACAAAACAATAGCAGTAGGGCAGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR CCA 90 bp GCAAGAATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAAGTTCAGATGCACTGCTaGAGCCAACAACTTCATACC +
Preference number: 4 (lower is better)
Translates to: ARIRLPSAMHPNCCGSEKVQMHC*SQQLHT
Trigger: GGTATGAAGTTGTTGGCTCCAGCAGTGCATCTGAAC...TTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp TCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACACCAGATTCCCCACTGTaGTTGATGGGTTTTGCCGAA +
Preference number: 4 (lower is better)
Translates to: SELSEKSSLTKFEVKEQTPDSPL*LMGFAE
Trigger: TTCGGCAAAACCCATCAACCACAGTGGGGAATCTGG...TGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCTTGGACACCCTGAAATaGCTGGCCAGTGACAGAGAT +
Preference number: 4 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSLDTLK*LASDRD
Trigger: ATCTCTGTCACTGGCCAGCCATTTCAGGGTGTCCAA...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
3UTR CAA 72 bp ACTAAATTTTTCTTCCCTCTCCAACTGAGTCTTGTGTaGAGTTGCCTACTTGCGCTAGCACATCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: TKFFFPLQLSLV*SCLLALAHLPL
Trigger: CAAGGGAAGATGTGCTAGCGCAAGTAGGCAACTCAACACAAGACTCAGTTGGAGAGGGAAGAAAAATTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp ATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAATCTGAGAACATGTTCAATGGCTaGCAGCAGTTCAGATGCACT +
Preference number: 4 (lower is better)
Translates to: IRLPSAMHPNCCGSEKSENMFNG*QQFRCT
Trigger: AGTGCATCTGAACTGCTGTCAGCCATTGAACATGTT...CTCAGATTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TTTATTGGCTGTAGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTATTTTGCACGAAGGATaGCACAGCTGCCTCAGTGGC +
Preference number: 4 (lower is better)
Translates to: FIGCRNGLGDKCPKNPQFILHEG*HSCLSG
Trigger: GCCACTGAGGCAGCTGTGTCATCCTTCGTGCAAAAT...AAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCTACAGCCAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TCTGCCTTGACACTTTTGTTTGCAGGGTTTAGGACCAGATGGAAGTGCCTTGTAATATCACAGGTCCATTaGCCTGAGCATTTCCATTTT +
Preference number: 4 (lower is better)
Translates to: SALTLLFAGFRTRWKCLVISQVH*PEHFHF
Trigger: AAAATGGAAATGCTCAGGTCAATGGACCTGTGATAT...TACAAGGCACTTCCATCTGGTCCTAAACCCTGCAAACAAAAGTGTCAAGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp AACCTACTCTTCTGCATTTATGGAGCACTTTCTTTGAATCAAATCACATGGAAAGATGGAACACGAGGATaGTCCGGTAAGCCAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NLLFCIYGALSLNQITWKDGTRG*SGKPAG
Trigger: TCCTGCTGGCTTACCGGATCATCCTCGTGTTCCATC...TTTCCATGTGATTTGATTCAAAGAAAGTGCTCCATAAATGCAGAAGAGTAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GAGCTATCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGTCAAAACAGCAAGGATaGATCAAAGGCTCGGGTTCC +
Preference number: 4 (lower is better)
Translates to: ELSELSEKSSLTKFEVKESKQQG*IKGSGS
Trigger: GGAACCCGAGCCTTTGATTCATCCTTGCTGTTTTGA...CTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGATAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp AGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTCCCTTAACTGGCAGTCTTGTGTTGAGTTaGCTACTTGCGCTAGCACAT +
Preference number: 4 (lower is better)
Translates to: RNGLGDKCPKNPQFPLTGSLVLS*LLALAH
Trigger: ATGTGCTAGCGCAAGTAGGCAACTCAACACAAGACT...GCCAGTTAAGGGAAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp TTCAAGTTTCTGCCCTACTGCTATTGTTTTGTAGTTCTACTCACTGACCCACAGGTCACCATGATCTCCTaGCTTCTTTCAAGTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FKFLPYCYCFVVLLTDPQVTMIS*LLSSFC
Trigger: GCAGAAACTTGAAAGAAGGCAGGAGATCATGGTGAC...CTGTGGGTCAGTGAGTAGAACTACAAAACAATAGCAGTAGGGCAGAAACTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR CCA 90 bp TCTGCCTTGACACTTTTGTTTGCAGGGTTTAGGACCAGATGGAAGTGCCTTGTATTGGCTTTTGTTCACTaGAATCCCTTTCCAGTCAAT +
Preference number: 4 (lower is better)
Translates to: SALTLLFAGFRTRWKCLVLAFVH*NPFPVN
Trigger: ATTGACTGGAAAGGGATTCCAGTGAACAAAAGCCAA...TACAAGGCACTTCCATCTGGTCCTAAACCCTGCAAACAAAAGTGTCAAGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp AACCTACTCTTCTGCATTTATGGAGCACTTTCTTTGAATCAAATCACATGGAAAGCCACAGCAGCTCACTaGCATGAACACAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: NLLFCIYGALSLNQITWKATAAH*HEHRLT
Trigger: AGTGAGCCTGTGTTCATGCCAGTGAGCTGCTGTGGC...TTTCCATGTGATTTGATTCAAAGAAAGTGCTCCATAAATGCAGAAGAGTAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp TCTGCCTTGACACTTTTGTTTGCAGGGTTTAGGACCAGATGGAAGTGCCTTGTATATGTCATCCAAAAGTaGCACTGGCTGTACAAGAAA +
Preference number: 4 (lower is better)
Translates to: SALTLLFAGFRTRWKCLVYVIQK*HWLYKK
Trigger: TTTCTTGTACAGCCAGTGCCACTTTTGGATGACATA...TACAAGGCACTTCCATCTGGTCCTAAACCCTGCAAACAAAAGTGTCAAGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp GATGTATACATGTTATCTGTGCAAAGATATCTCACCCAAAGCCCCACTTCTGGCAAAGTTAGCTGGATGTaGTGGCAGGTGTCTGTAATT +
Preference number: 4 (lower is better)
Translates to: DVYMLSVQRYLTQSPTSGKVSWM*WQVSVI
Trigger: AATTACAGACACCTGCCACCACATCCAGCTAACTTT...GCCAGAAGTGGGGCTTTGGGTGAGATATCTTTGCACAGATAACATGTATACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
3UTR CAA 72 bp TTTTGCACGAAGGATGACACAGCTGCCTCAGTGGCATaGCCTACAATCATACTGAAATTCTTGTTCAGTTCT +
Preference number: 4 (lower is better)
Translates to: FCTKDDTAASVA*PTIILKFLFSS
Trigger: AGAACTGAACAAGAATTTCAGTATGATTGTAGGCAATGCCACTGAGGCAGCTGTGTCATCCTTCGTGCAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR TCA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCCTTTTCCGAACACTCTaGAAGAGCCGTCTTCTAATG +
Preference number: 4 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSLFRTL*KSRLLM
Trigger: CATTAGAAGACGGCTCTTTCAGAGTGTTCGGAAAAG...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTATTCCCCACTGTGGTTaGTGGGTTTTGCCGAATGAT +
Preference number: 4 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNIIPHCG*WVLPND
Trigger: ATCATTCGGCAAAACCCATCAACCACAGTGGGGAAT...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACAGACATCCTCCATTGTTaGATTGGACACCCTGAAATG +
Preference number: 4 (lower is better)
Translates to: SELSEKSSLTKFEVKEQTDILHC*IGHPEM
Trigger: CATTTCAGGGTGTCCAATTCAACAATGGAGGATGTC...TGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GAGCTATCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAAACTGAGTTAGCATaGTGTTGTCGGAGGAATCTC +
Preference number: 4 (lower is better)
Translates to: ELSELSEKSSLTKFEVKEQTELA*CCRRNL
Trigger: GAGATTCCTCCGACAACATCATGCTAACTCAGTTTG...CTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGATAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp ACTATGATGTATACATGTTATCTGTGCAAAGATATCTCACCCAAAGCCCCACTTCGGGTGCATAGTCTGTaGCTGGTGATTTATCTCTTC +
Preference number: 4 (lower is better)
Translates to: TMMYTCYLCKDISPKAPLRVHSL*LVIYLF
Trigger: GAAGAGATAAATCACCAGTCACAGACTATGCACCCG...AAGTGGGGCTTTGGGTGAGATATCTTTGCACAGATAACATGTATACATCATAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR TCA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCACACATCCATTGCCCTaGCAAACACTAGACATACAG +
Preference number: 4 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSTHPLP*QTLDIQ
Trigger: CTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGT...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp AAGTTTCTGCCCTACTGCTATTGTTTTGTAGTTCTACTCACTGACCCACAGTTTATCTCCTGTAGTTGCTaGAGGAGAAAATCCACCCTT +
Preference number: 4 (lower is better)
Translates to: KFLPYCYCFVVLLTDPQFISCSC*RRKSTL
Trigger: AAGGGTGGATTTTCTCCTTCAGCAACTACAGGAGAT...AAACTGTGGGTCAGTGAGTAGAACTACAAAACAATAGCAGTAGGGCAGAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR CCA 90 bp GCTGCAGGGCAGGGTATATTCATCATCCTTGGACCCAAATCCAAAGACAATGTCTATATTCATCATCCTTaGACCCAAATCCAAAGACAA +
Preference number: 4 (lower is better)
Translates to: AAGQGIFIILGPKSKDNVYIHHP*TQIQRQ
Trigger: TTGTCTTTGGATTTGGGTCCAAGGATGATGAATATA...GACATTGTCTTTGGATTTGGGTCCAAGGATGATGAATATACCCTGCCCTGCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR CCA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTACACAGCTGCCTCAGTaGCATTGCCTACAATCATAC +
Preference number: 4 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNITQLPQ*HCLQSY
Trigger: GTATGATTGTAGGCAATGCCACTGAGGCAGCTGTGT...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp AGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTCCCTTAACTGGCAGGGATCTCTGGAATTaGTCTGACCCAATTAACACA +
Preference number: 4 (lower is better)
Translates to: RNGLGDKCPKNPQFPLTGRDLWN*SDPINT
Trigger: TGTGTTAATTGGGTCAGACCAATTCCAGAGATCCCT...GCCAGTTAAGGGAAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp CACTGGCTGTACAAGAAAATAACTTCCACAAAGTGCCTATGGTGTATTATGAAAAATGGAAACAGCTTGTaGAGGGCTGTCTTAGCCTTC +
Preference number: 4 (lower is better)
Translates to: HWLYKKITSTKCLWCIMKNGNSL*RAVLAF
Trigger: GAAGGCTAAGACAGCCCTTCACAAGCTGTTTCCATT...TTTCATAATACACCATAGGCACTTTGTGGAAGTTATTTTCTTGTACAGCCAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTGAGGCACCAGAGTGCTaGTGTTTTCTAATGTCTCTA +
Preference number: 4 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNIEAPEC*CFLMSL
Trigger: TAGAGACATTAGAAAACATCAGCACTCTGGTGCCTC...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GAGCTATCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGTCGTTCCACTGCAAATaGCTGAAATCCCAAAACACA +
Preference number: 4 (lower is better)
Translates to: ELSELSEKSSLTKFEVKESFHCK*LKSQNT
Trigger: TGTGTTTTGGGATTTCAGTCATTTGCAGTGGAACGA...CTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGATAGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp AGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTCCCTTAACTGGCTCATTTGAGACAAACTaGGTTAGCATGATGTTGTCG +
Preference number: 4 (lower is better)
Translates to: RNGLGDKCPKNPQFPLTGSFETN*VSMMLS
Trigger: CGACAACATCATGCTAACTCAGTTTGTCTCAAATGA...GCCAGTTAAGGGAAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp AGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTCCCTTAACTGGCTTTATTTGCATAGCATaGAGGCTTTCCATGTCAGGA +
Preference number: 4 (lower is better)
Translates to: RNGLGDKCPKNPQFPLTGFICIA*RLSMSG
Trigger: TCCTGACATGGAAAGCCTTCATGCTATGCAAATAAA...GCCAGTTAAGGGAAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTCATACCCAGCAACGATaGTTCCATTTCGAAATTGGG +
Preference number: 4 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNIHTQQR*FHFEIG
Trigger: CCCAATTTCGAAATGGAAGCATCGTTGCTGGGTATG...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp CATGTGTGCTGCACCTTGGTGCCTTGTGGAAGTCTAACTTTGAATTTCTCTCAGCCAGATTATTGGAAATaGCATGTGAATAATGCTGTT +
Preference number: 4 (lower is better)
Translates to: HVCCTLVPCGSLTLNFSQPDYWK*HVNNAV
Trigger: AACAGCATTATTCACATGGCATTTCCAATAATCTGG...CTGAGAGAAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp AGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTCCCTTAACTGGCGCTGATAATAGTTTCTaGAAGGGATCTCTGGAATTG +
Preference number: 4 (lower is better)
Translates to: RNGLGDKCPKNPQFPLTGADNSF*KGSLEL
Trigger: CAATTCCAGAGATCCCTTCCAGAAACTATTATCAGC...GCCAGTTAAGGGAAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp GGCTGTAGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTCCCTTACCTTCAGTATACTTGTaGCTCAATCACTTCTTATGC +
Preference number: 4 (lower is better)
Translates to: GCRNGLGDKCPKNPQFPLPSVYL*LNHFLC
Trigger: GCATAAGAAGTGATTGAGCCACAAGTATACTGAAGG...TAAGGGAAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCTACAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp ACTATGATGTATACATGTTATCTGTGCAAAGATATCTCACCCAAAGCCCCACTTAACTTTCATTTTCCCTaGACTGAACAGCAGCAGTCG +
Preference number: 4 (lower is better)
Translates to: TMMYTCYLCKDISPKAPLNFHFP*TEQQQS
Trigger: CGACTGCTGCTGTTCAGTCCAGGGAAAATGAAAGTT...AAGTGGGGCTTTGGGTGAGATATCTTTGCACAGATAACATGTATACATCATAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR CCA 90 bp TCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATGGCTTCACAATCTTTaGCAAGTCACTTTACCTCTC +
Preference number: 4 (lower is better)
Translates to: SELSEKSSLTKFEVKEQTWLHNL*QVTLPL
Trigger: GAGAGGTAAAGTGACTTGCCAAAGATTGTGAAGCCA...TGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp ATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAATCTGAGCACCTTGGTGCCTTGTaGAAGTCTAACTTTGAATTT +
Preference number: 4 (lower is better)
Translates to: IRLPSAMHPNCCGSEKSEHLGAL*KSNFEF
Trigger: AAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTG...CTCAGATTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp GCAAGAATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAATCTCACTATGGTTCATaGGAAACACACACATCCATT +
Preference number: 4 (lower is better)
Translates to: ARIRLPSAMHPNCCGSEKSHYGS*ETHTSI
Trigger: AATGGATGTGTGTGTTTCCCATGAACCATAGTGAGA...TTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp GAGCTATCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGTTGCATGTCTCACTATaGTTCATGGGAAACACACAC +
Preference number: 4 (lower is better)
Translates to: ELSELSEKSSLTKFEVKELHVSL*FMGNTH
Trigger: GTGTGTGTTTCCCATGAACCATAGTGAGACATGCAA...CTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGATAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp AACCTACTCTTCTGCATTTATGGAGCACTTTCTTTGAATCAAATCACATGGAAACTGAGGTTGTTGAGATaGCATTCACAGCTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: NLLFCIYGALSLNQITWKLRLLR*HSQLGS
Trigger: ACTCCCAAGCTGTGAATGTCATCTCAACAACCTCAG...TTTCCATGTGATTTGATTCAAAGAAAGTGCTCCATAAATGCAGAAGAGTAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TTTATTGGCTGTAGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTCATTTCGAAATTGGGTaGCCTGAACCGACTCAAAAC +
Preference number: 4 (lower is better)
Translates to: FIGCRNGLGDKCPKNPQFHFEIG*PEPTQN
Trigger: GTTTTGAGTCGGTTCAGGTCACCCAATTTCGAAATG...AAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCTACAGCCAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GACTACTGGGTTTTGAACTATGATGTATACATGTTATCTGTGCAAAGATATCTCCATCCACTGTCACCATaGTCTCCTGCCTTCTTTCAA +
Preference number: 4 (lower is better)
Translates to: DYWVLNYDVYMLSVQRYLHPLSP*SPAFFQ
Trigger: TTGAAAGAAGGCAGGAGATCATGGTGACAGTGGATG...GAGATATCTTTGCACAGATAACATGTATACATCATAGTTCAAAACCCAGTAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR GCA 90 bp AACCTACTCTTCTGCATTTATGGAGCACTTTCTTTGAATCAAATCACATGGAAAGCAGTTCAGATGCACTaGTGGAGCCAACAACTTCAT +
Preference number: 4 (lower is better)
Translates to: NLLFCIYGALSLNQITWKAVQMH*WSQQLH
Trigger: ATGAAGTTGTTGGCTCCAGCAGTGCATCTGAACTGC...TTTCCATGTGATTTGATTCAAAGAAAGTGCTCCATAAATGCAGAAGAGTAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTTTCATATTTCATGTGTaGTGCACCTTGGTGCCTTGT +
Preference number: 4 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNIFIFHV*CTLVPC
Trigger: ACAAGGCACCAAGGTGCAGCACACATGAAATATGAA...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp TTTATTGGCTGTAGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTGCTGACCTTCACTCTTaGATGTCTCACTATGGTTCA +
Preference number: 4 (lower is better)
Translates to: FIGCRNGLGDKCPKNPQFADLHS*MSHYGS
Trigger: TGAACCATAGTGAGACATGCAAGAGTGAAGGTCAGC...AAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCTACAGCCAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp CACTGGCTGTACAAGAAAATAACTTCCACAAAGTGCCTATGGTGTATTATGAAATCTGGAAGGGATCTCTaGAATTGGTCTGACCCAATT +
Preference number: 4 (lower is better)
Translates to: HWLYKKITSTKCLWCIMKSGRDL*NWSDPI
Trigger: AATTGGGTCAGACCAATTCCAGAGATCCCTTCCAGA...TTTCATAATACACCATAGGCACTTTGTGGAAGTTATTTTCTTGTACAGCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp GAGCTATCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGGCTGTAGAAATGGTCTaGGAGACAAATGTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: ELSELSEKSSLTKFEVKEAVEMV*ETNVLK
Trigger: TTTTAGGACATTTGTCTCCCAGACCATTTCTACAGC...CTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGATAGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp AGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTCCCTTAACTGGCATCCAAAAGTGGCACTaGCTGTACAAGAAAATAACT +
Preference number: 4 (lower is better)
Translates to: RNGLGDKCPKNPQFPLTGIQKWH*LYKKIT
Trigger: AGTTATTTTCTTGTACAGCCAGTGCCACTTTTGGAT...GCCAGTTAAGGGAAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TTTATTGGCTGTAGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTACAGGTCCATTGACCTaGGCATTTCCATTTTTGGAA +
Preference number: 4 (lower is better)
Translates to: FIGCRNGLGDKCPKNPQFTGPLT*AFPFLE
Trigger: TTCCAAAAATGGAAATGCTCAGGTCAATGGACCTGT...AAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCTACAGCCAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TTTATTGGCTGTAGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTATAGTCTGTGACTGGTaGTTTATCTCTTCACACCAG +
Preference number: 4 (lower is better)
Translates to: FIGCRNGLGDKCPKNPQFIVCDW*FISSHQ
Trigger: CTGGTGTGAAGAGATAAATCACCAGTCACAGACTAT...AAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCTACAGCCAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp TCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACAATAGAACCATCTAACTaGTCCTCAGTCATTTCCTTT +
Preference number: 4 (lower is better)
Translates to: SELSEKSSLTKFEVKEQTIEPSN*SSVISF
Trigger: AAAGGAAATGACTGAGGATCAGTTAGATGGTTCTAT...TGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GACTACTGGGTTTTGAACTATGATGTATACATGTTATCTGTGCAAAGATATCTCTCTGGCTCCGAATTATaGGGCATCATATCTCCTGTA +
Preference number: 4 (lower is better)
Translates to: DYWVLNYDVYMLSVQRYLSGSEL*GIISPV
Trigger: TACAGGAGATATGATGCCTCATAATTCGGAGCCAGA...GAGATATCTTTGCACAGATAACATGTATACATCATAGTTCAAAACCCAGTAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR GCA 90 bp TTTATTGGCTGTAGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTGTGGTTGATGGGTTTTaGCGAATGATGACAGAAAGA +
Preference number: 4 (lower is better)
Translates to: FIGCRNGLGDKCPKNPQFVVDGF*RMMTER
Trigger: TCTTTCTGTCATCATTCGGCAAAACCCATCAACCAC...AAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCTACAGCCAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTAAAGCAAAAATAACATaGCAAGCCAGATTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNIKAKIT*QARFWL
Trigger: CAGCCAGAATCTGGCTTGGCATGTTATTTTTGCTTT...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCCAAAACCTACTCTTCTaGATTTATGGAGCACTTTCT +
Preference number: 4 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSQNLLF*IYGALS
Trigger: AGAAAGTGCTCCATAAATGCAGAAGAGTAGGTTTTG...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp AACCTACTCTTCTGCATTTATGGAGCACTTTCTTTGAATCAAATCACATGGAAAATATTTCATGTGTGCTaGACCTTGGTGCCTTGTGGA +
Preference number: 4 (lower is better)
Translates to: NLLFCIYGALSLNQITWKIFHVC*TLVPCG
Trigger: TCCACAAGGCACCAAGGTGCAGCACACATGAAATAT...TTTCCATGTGATTTGATTCAAAGAAAGTGCTCCATAAATGCAGAAGAGTAGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp TCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACAAATGTGATGGAAGTATaGAAGAGAAGTGTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: SELSEKSSLTKFEVKEQTNVMEV*KRSVAS
Trigger: TGAAGCAACACTTCTCTTCCATACTTCCATCACATT...TGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GTTTTGAACTATGATGTATACATGTTATCTGTGCAAAGATATCTCACCCAAAGCATAGTCTGTGACTGGTaGTTTATCTCTTCACACCAG +
Preference number: 4 (lower is better)
Translates to: VLNYDVYMLSVQRYLTQSIVCDW*FISSHQ
Trigger: CTGGTGTGAAGAGATAAATCACCAGTCACAGACTAT...GCTTTGGGTGAGATATCTTTGCACAGATAACATGTATACATCATAGTTCAAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR TCA 90 bp AACCTACTCTTCTGCATTTATGGAGCACTTTCTTTGAATCAAATCACATGGAAAAAGAAATCTGTCTTATaGGATAGGGCTGCCTTCACA +
Preference number: 4 (lower is better)
Translates to: NLLFCIYGALSLNQITWKKKSVL*DRAAFT
Trigger: TGTGAAGGCAGCCCTATCTCATAAGACAGATTTCTT...TTTCCATGTGATTTGATTCAAAGAAAGTGCTCCATAAATGCAGAAGAGTAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR TCA 90 bp GACTACTGGGTTTTGAACTATGATGTATACATGTTATCTGTGCAAAGATATCTCTGTAGTTCTACTCACTaGCCCACAGTTTTGAGAATG +
Preference number: 4 (lower is better)
Translates to: DYWVLNYDVYMLSVQRYLCSSTH*PTVLRM
Trigger: CATTCTCAAAACTGTGGGTCAGTGAGTAGAACTACA...GAGATATCTTTGCACAGATAACATGTATACATCATAGTTCAAAACCCAGTAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR GCA 90 bp TCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATCCAGTATGAGAAAATaGATAATGGCCTTTGTTTTG +
Preference number: 4 (lower is better)
Translates to: SELSEKSSLTKFEVKEQTSSMRK*IMAFVL
Trigger: CAAAACAAAGGCCATTATGCATTTTCTCATACTGGA...TGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp AACCTACTCTTCTGCATTTATGGAGCACTTTCTTTGAATCAAATCACATGGAAAGACTTCCATCAGCCATaGATCCTAATTGTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: NLLFCIYGALSLNQITWKDFHQP*ILIVVV
Trigger: AACCACAACAATTAGGATGCATGGCTGATGGAAGTC...TTTCCATGTGATTTGATTCAAAGAAAGTGCTCCATAAATGCAGAAGAGTAGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp GAGCTATCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGTATATTCATCATCCTTaGACCCAAATCCAAAGACAA +
Preference number: 4 (lower is better)
Translates to: ELSELSEKSSLTKFEVKEYIHHP*TQIQRQ
Trigger: TTGTCTTTGGATTTGGGTCCAAGGATGATGAATATA...CTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGATAGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CCA 90 bp TTTATTGGCTGTAGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTTTTTTGTATTCCAGGTaGTCATTTGTGACTCCTTCC +
Preference number: 4 (lower is better)
Translates to: FIGCRNGLGDKCPKNPQFFLYSR*SFVTPS
Trigger: GGAAGGAGTCACAAATGACCACCTGGAATACAAAAA...AAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCTACAGCCAATAAA
38% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR GCA 90 bp GACTACTGGGTTTTGAACTATGATGTATACATGTTATCTGTGCAAAGATATCTCCTTCTTTCAAGTTTCTaGCCTACTGCTATTGTTTTG +
Preference number: 4 (lower is better)
Translates to: DYWVLNYDVYMLSVQRYLLLSSF*PTAIVL
Trigger: CAAAACAATAGCAGTAGGGCAGAAACTTGAAAGAAG...GAGATATCTTTGCACAGATAACATGTATACATCATAGTTCAAAACCCAGTAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR CAA 90 bp CTGCCACCCAGAGGACTCACACTTGGCTGTGATGTTTCCCCTGTAGCCACTGCTGATGACATTCACAGCTaGGGAGTGCTCCAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: LPPRGLTLGCDVSPVATADDIHS*GVLQPC
Trigger: ACACGGCTGGAGCACTCCCAAGCTGTGAATGTCATC...AGCAGTGGCTACAGGGGAAACATCACAGCCAAGTGTGAGTCCTCTGGGTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR CAA 90 bp CTGCCACCCAGAGGACTCACACTTGGCTGTGATGTTTCCCCTGTAGCCACTGCTTTACACTGGGCGAAATaGGGTGACCTGAACCGACTC +
Preference number: 5 (lower is better)
Translates to: LPPRGLTLGCDVSPVATALHWAK*GDLNRL
Trigger: GAGTCGGTTCAGGTCACCCAATTTCGCCCAGTGTAA...AGCAGTGGCTACAGGGGAAACATCACAGCCAAGTGTGAGTCCTCTGGGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR CAA 90 bp ATCATATCTCCTGTAGTTGCTGAAGGAGAAAATCCACCCTTCGACAACCCGCAACCCGGTAGGCAGAGGTaGCAGGGTTGCAGTGAGCCT +
Preference number: 5 (lower is better)
Translates to: IISPVVAEGENPPFDNPQPGRQR*QGCSEP
Trigger: AGGCTCACTGCAACCCTGCAACCTCTGCCTACCGGG...TTGCGGGTTGTCGAAGGGTGGATTTTCTCCTTCAGCAACTACAGGAGATATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS TCA 90 bp TCAGGCGCCCAAGTGCCCGCCATTTTCCTTCTTGTTCTTCTCAACTaGCAATGCTGTTTTCTGTTCAAGCCACCTGGGATCTGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: SGAQVPAIFLLVLLN*QCCFLFKPPGICLE
Trigger: CTCCAGGCAGATCCCAGGTGGCTTGAACAGAAAACAGCATTGTCAGTTGAGAAGAACAAGAAGGAAAATGGCGGGCACTTGGGCGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS GCA 90 bp CACGACTCCACGGGTTCACCAGGGTCTGATGTCATCCTTGCTCTTTaGATACTGGCCAATGATGCACGTAGGTATACTTACCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: HDSTGSPGSDVILAL*ILANDARRYTYPPP
Trigger: AGGTGGAGGGTAAGTATACCTACGTGCATCATTGGCCAGTATGCAAAGAGCAAGGATGACATCAGACCCTGGTGAACCCGTGGAGTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS GCA 90 bp CTGACAAAACTATCAACTCTGTCTTTTGAGCTGCAACCTAGACTCTaGTGCCCAGACGCTACCACTCATGCACGACTCCACGGGTTCACC +
Preference number: 5 (lower is better)
Translates to: LTKLSTLSFELQPRL*CPDATTHARLHGFT
Trigger: GGTGAACCCGTGGAGTCGTGCATGAGTGGTAGCGTCTGGGCAGCAGAGTCTAGGTTGCAGCTCAAAAGACAGAGTTGATAGTTTTGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS-3UTR CAA 90 bp AACAGCAAGGATGAATCAAAGGCTCGGGTTCCTCTGGGCACTATGGTCACGGCTGGTCAAGTGAGTACATaGGCACGTCACGATGTCTTG +
Preference number: 5 (lower is better)
Translates to: NSKDESKARVPLGTMVTAGQVST*ARHDVL
Trigger: CAAGACATCGTGACGTGCCAATGTACTCACTTGACC...AGCCGTGACCATAGTGCCCAGAGGAACCCGAGCCTTTGATTCATCCTTGCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp AACAGCAAGGATGAATCAAAGGCTCGGGTTCCTCTGGGCACTATGGTCACGGCTTGCACTAGGTCTGCCTaGACACTTTTGTTTGCAGGG +
Preference number: 5 (lower is better)
Translates to: NSKDESKARVPLGTMVTACTRSA*TLLFAG
Trigger: CCCTGCAAACAAAAGTGTCAAGGCAGACCTAGTGCA...AGCCGTGACCATAGTGCCCAGAGGAACCCGAGCCTTTGATTCATCCTTGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS TCA 90 bp CTTGTGAAGGGCTGTCTTAGCCTTCTCGGCAACATGTTCAATGGCTaGCAGCAGTTCAGATGCACTGCTGGAGCCAACAACTTCATACCC +
Preference number: 5 (lower is better)
Translates to: LVKGCLSLLGNMFNG*QQFRCTAGANNFIP
Trigger: GGGTATGAAGTTGTTGGCTCCAGCAGTGCATCTGAACTGCTGTCAGCCATTGAACATGTTGCCGAGAAGGCTAAGACAGCCCTTCACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
ENST00000471487.5
ENST00000493249.5
CDS GCA 90 bp GGCAGTCCCCTTCCACTCAACATTAAGTCCACTCAGGCGCCCAAGTaGCCGCCATTTTCCTTCTTGTTCTTCTCAACTGACAATGCTGTT +
Preference number: 5 (lower is better)
Translates to: GSPLPLNIKSTQAPK*PPFSFLFFSTDNAV
Trigger: AACAGCATTGTCAGTTGAGAAGAACAAGAAGGAAAATGGCGGGCACTTGGGCGCCTGAGTGGACTTAATGTTGAGTGGAAGGGGACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS-3UTR CAA 90 bp GCTGCAGGGCAGGGTATATTCATCATCCTTGGACCCAAATCCAAAGACAATGTCCCAGAGGACTCACACTaGGCTGTGATGTTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: AAGQGIFIILGPKSKDNVPEDSH*AVMFPL
Trigger: CAGGGGAAACATCACAGCCAAGTGTGAGTCCTCTGG...GACATTGTCTTTGGATTTGGGTCCAAGGATGATGAATATACCCTGCCCTGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR CAA 90 bp AGATGCACTGCTGGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCTGATGACATTCACAGCTaGGGAGTGCTCCAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: RCTAGANNFIPSNDASISDDIHS*GVLQPC
Trigger: ACACGGCTGGAGCACTCCCAAGCTGTGAATGTCATC...AGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487323.5
CDS-3UTR CAA 90 bp AACAGCAAGGATGAATCAAAGGCTCGGGTTCCTCTGGGCACTATGGTCACGGCTCAACTGAGTCTTGTGTaGAGTTGCCTACTTGCGCTA +
Preference number: 5 (lower is better)
Translates to: NSKDESKARVPLGTMVTAQLSLV*SCLLAL
Trigger: TAGCGCAAGTAGGCAACTCAACACAAGACTCAGTTG...AGCCGTGACCATAGTGCCCAGAGGAACCCGAGCCTTTGATTCATCCTTGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS CCA 90 bp TCTCGGCAACATGTTCAATGGCTGACAGCAGTTCAGATGCACTGCTaGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCTGC +
Preference number: 5 (lower is better)
Translates to: SRQHVQWLTAVQMHC*SQQLHTQQRCFHFC
Trigger: GCAGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCTGAACTGCTGTCAGCCATTGAACATGTTGCCGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS-3UTR CAA 90 bp CATGTGTGCTGCACCTTGGTGCCTTGTGGAAGTCTAACTTTGAATTTCTCTCAGCCAGAGGACTCACACTaGGCTGTGATGTTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: HVCCTLVPCGSLTLNFSQPEDSH*AVMFPL
Trigger: CAGGGGAAACATCACAGCCAAGTGTGAGTCCTCTGG...CTGAGAGAAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp GAGACACTCCCTAGGCCTCTCAAAACAGCAAGGATGAATCAAAGGCTCGGGTTCAGTGGTTTGCTTCCATaGGACCAGTTAAGCCAACAC +
Preference number: 5 (lower is better)
Translates to: ETLPRPLKTARMNQRLGFSGLLP*DQLSQH
Trigger: GTGTTGGCTTAACTGGTCCAATGGAAGCAAACCACT...GAACCCGAGCCTTTGATTCATCCTTGCTGTTTTGAGAGGCCTAGGGAGTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp AACAGCAAGGATGAATCAAAGGCTCGGGTTCCTCTGGGCACTATGGTCACGGCTCTTGTTGAACAGAAGTaGTCGCAGCTTACTGTCCAA +
Preference number: 5 (lower is better)
Translates to: NSKDESKARVPLGTMVTALVEQK*SQLTVQ
Trigger: TTGGACAGTAAGCTGCGACAACTTCTGTTCAACAAG...AGCCGTGACCATAGTGCCCAGAGGAACCCGAGCCTTTGATTCATCCTTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS TCA 90 bp ATACTTACCCTCCACCTAGCCATGCTCACTGGGATATTGCCACTCTaGAACTCAAGACCAGGGCAAGTCTACACAGTGAAAATGCCTCAC +
Preference number: 5 (lower is better)
Translates to: ILTLHLAMLTGILPL*NSRPGQVYTVKMPH
Trigger: GTGAGGCATTTTCACTGTGTAGACTTGCCCTGGTCTTGAGTTTCAGAGTGGCAATATCCCAGTGAGCATGGCTAGGTGGAGGGTAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS GCA 90 bp CCCACTGTGGTTGATGGGTTTTGCCGAATGATGACAGAAAGATTTTaGACGAAGGATGACACAGCTGCCTCAGTGGCATTGCCTACAATC +
Preference number: 5 (lower is better)
Translates to: PTVVDGFCRMMTERF*TKDDTAASVALPTI
Trigger: GATTGTAGGCAATGCCACTGAGGCAGCTGTGTCATCCTTCGTGCAAAATCTTTCTGTCATCATTCGGCAAAACCCATCAACCACAGTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS GCA 90 bp TTCAAGCCACCTGGGATCTGCCTGGAGCGAACTAGTCTCAACTATTaGTCATGTCCAGAATTGAGGCAACGAAGGCAAGAGCAAGAAGAA +
Preference number: 5 (lower is better)
Translates to: FKPPGICLERTSLNY*SCPELRQRRQEQEE
Trigger: TTCTTCTTGCTCTTGCCTTCGTTGCCTCAATTCTGGACATGAGCAATAGTTGAGACTAGTTCGCTCCAGGCAGATCCCAGGTGGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CCA 90 bp TCTCGGCAACATGTTCAATGGCTGACAGCAGTTCAGATGCACTGCTaGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCGAA +
Preference number: 5 (lower is better)
Translates to: SRQHVQWLTAVQMHC*SQQLHTQQRCFHFE
Trigger: TTCGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCTGAACTGCTGTCAGCCATTGAACATGTTGCCGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371253.7
ENST00000449332.6
ENST00000471487.5
ENST00000493249.5
CDS CCA 90 bp AATGATGCACGTAGGTATACTTACCCTCCACCTAGCCATGCTCACTaGGATATTGCCACTCTGAAACTCAAGACCAGGGCAAGTCTACAC +
Preference number: 5 (lower is better)
Translates to: NDARRYTYPPPSHAH*DIATLKLKTRASLH
Trigger: GTGTAGACTTGCCCTGGTCTTGAGTTTCAGAGTGGCAATATCCCAGTGAGCATGGCTAGGTGGAGGGTAAGTATACCTACGTGCATCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CCA 90 bp TTCCCCTGTAGCCACTGCTGCAGGGCAGGGTATATTCATCATCCTTaGACCCAAATCCAAAGACAATGTCATTACACTGGGCGAAATTGG +
Preference number: 5 (lower is better)
Translates to: FPCSHCCRAGYIHHP*TQIQRQCHYTGRNW
Trigger: CCAATTTCGCCCAGTGTAATGACATTGTCTTTGGATTTGGGTCCAAGGATGATGAATATACCCTGCCCTGCAGCAGTGGCTACAGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR CAA 90 bp AGATGCACTGCTGGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCTACTCCATTCAGGCTGTaGCAGTCTGTGGTAGCCTTT +
Preference number: 5 (lower is better)
Translates to: RCTAGANNFIPSNDASISTPFRL*QSVVAF
Trigger: AAAGGCTACCACAGACTGCAACAGCCTGAATGGAGT...AGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487323.5
CDS-3UTR CAA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCGAGTCTTGTGTTGAGTaGCCTACTTGCGCTAGCACA +
Preference number: 5 (lower is better)
Translates to: GSWETHTSIALTNTRHTGESCVE*PTCAST
Trigger: TGTGCTAGCGCAAGTAGGCAACTCAACACAAGACTC...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS TCA 90 bp TTTCCGAACACTCTGAAAGAGCCGTCTTCTAATGGAAACAGCTTGTaGAGGGCTGTCTTAGCCTTCTCGGCAACATGTTCAATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: FPNTLKEPSSNGNSL*RAVLAFSATCSMAD
Trigger: GTCAGCCATTGAACATGTTGCCGAGAAGGCTAAGACAGCCCTTCACAAGCTGTTTCCATTAGAAGACGGCTCTTTCAGAGTGTTCGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
ENST00000471487.5
ENST00000493249.5
CDS CCA 90 bp TCTCGGCAACATGTTCAATGGCTGACAGCAGTTCAGATGCACTGCTaGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCTTT +
Preference number: 5 (lower is better)
Translates to: SRQHVQWLTAVQMHC*SQQLHTQQRCFHFF
Trigger: AAAGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCTGAACTGCTGTCAGCCATTGAACATGTTGCCGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000283297.5
CDS-3UTR CAA 90 bp TTCTTGTTCAGTTCTTCAAGCAGAGAGAGCACACAAGTCTCCCTGATGACCTGCGCTGCCTCAGTGGCATaGCCTACAATCATACTGAAA +
Preference number: 5 (lower is better)
Translates to: FLFSSSSRESTQVSLMTCAASVA*PTIILK
Trigger: TTTCAGTATGATTGTAGGCAATGCCACTGAGGCAGC...GCAGGTCATCAGGGAGACTTGTGTGCTCTCTCTGCTTGAAGAACTGAACAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR CAA 90 bp ATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAATCTGAGCGGATGATGGTGGCCTaGTCATCCCGACTCAGTCTT +
Preference number: 5 (lower is better)
Translates to: IRLPSAMHPNCCGSEKSERMMVA*SSRLSL
Trigger: AAGACTGAGTCGGGATGACAAGGCCACCATCATCCG...CTCAGATTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp ATGATGACAGAAAGATTTTGCACGAAGGATGACACAGCTGCCTCAGTGGCATTGACTCCATTCAGGCTGTaGCAGTCTGTGGTAGCCTTT +
Preference number: 5 (lower is better)
Translates to: MMTERFCTKDDTAASVALTPFRL*QSVVAF
Trigger: AAAGGCTACCACAGACTGCAACAGCCTGAATGGAGT...CAATGCCACTGAGGCAGCTGTGTCATCCTTCGTGCAAAATCTTTCTGTCATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR CAA 90 bp GCAAGAATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAAGATGACATTCACAGCTaGGGAGTGCTCCAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: ARIRLPSAMHPNCCGSEKDDIHS*GVLQPC
Trigger: ACACGGCTGGAGCACTCCCAAGCTGTGAATGTCATC...TTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp TGCAAAGATATCTCACCCAAAGCCCCACTTCTGGCTCCGAATTATGAGGCATCAGTTCTCTCACAGAAATaGACACTCTGGCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: CKDISPKAPLLAPNYEASVLSQK*TLWLRL
Trigger: CAACCTCAGCCAGAGTGTCAATTTCTGTGAGAGAAC...TGATGCCTCATAATTCGGAGCCAGAAGTGGGGCTTTGGGTGAGATATCTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR CAA 90 bp GCTGCAGGGCAGGGTATATTCATCATCCTTGGACCCAAATCCAAAGACAATGTCGTTCTCTCACAGAAATaGACACTCTGGCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: AAGQGIFIILGPKSKDNVVLSQK*TLWLRL
Trigger: CAACCTCAGCCAGAGTGTCAATTTCTGTGAGAGAAC...GACATTGTCTTTGGATTTGGGTCCAAGGATGATGAATATACCCTGCCCTGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475745.5
CDS-3UTR CAA 90 bp AGATGCACTGCTGGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCTGTTCTCTCACAGAAATaGACACTCTGGCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: RCTAGANNFIPSNDASISVLSQK*TLWLRL
Trigger: CAACCTCAGCCAGAGTGTCAATTTCTGTGAGAGAAC...AGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487323.5
CDS-3UTR CAA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTTCCTTCCACCCCACCTaGGACACGGAGGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNISFHPT*DTEVSG
Trigger: GCCAGAAACCTCCGTGTCCAAGGTGGGGTGGAAGGA...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp AGATGCACTGCTGGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCTTATAACTGTCCGAAATaGGGTGACCTGAACCGACTC +
Preference number: 5 (lower is better)
Translates to: RCTAGANNFIPSNDASISYNCPK*GDLNRL
Trigger: GAGTCGGTTCAGGTCACCCAATTTCGGACAGTTATA...AGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487323.5
CDS TCA 90 bp TTTCATTCACTAGGTGGCAGCCTGCATCGTTCCACTGCAAATGACTaGAATCCCAAAACACACAATGAGGCTGGCTCAGGTTTGACTCTA +
Preference number: 5 (lower is better)
Translates to: FHSLGGSLHRSTAND*NPKTHNEAGSGLTL
Trigger: TAGAGTCAAACCTGAGCCAGCCTCATTGTGTGTTTTGGGATTTCAGTCATTTGCAGTGGAACGATGCAGGCTGCCACCTAGTGAATGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS TCA 90 bp AGCTGGAAAACCAAGTGGAGACTGTCAAGTAGGCCGTTGGTTATTTaGGTCTGGAGTTCAGGGGAGTGCCCGAGCTCAAGTAATAAATTT +
Preference number: 5 (lower is better)
Translates to: SWKTKWRLSSRPLVI*VWSSGECPSSSNKF
Trigger: AAATTTATTACTTGAGCTCGGGCACTCCCCTGAACTCCAGACTCAAATAACCAACGGCCTACTTGACAGTCTCCACTTGGTTTTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS TCA 90 bp GGATATTGCCACTCTGAAACTCAAGACCAGGGCAAGTCTACACAGTaGAAATGCCTCACCTTGTTCAGTTCTTCAAGCAGAGAGAGCACA +
Preference number: 5 (lower is better)
Translates to: GYCHSETQDQGKSTQ*KCLTLFSSSSREST
Trigger: TGTGCTCTCTCTGCTTGAAGAACTGAACAAGGTGAGGCATTTTCACTGTGTAGACTTGCCCTGGTCTTGAGTTTCAGAGTGGCAATATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS TCA 90 bp CAGCTTAGTTGCTGCTCTACCATCCATCATAGACCTCCTCAGCAATaGTACACTCCTCCACAACACCTCTGCCTGACAAAACTATCAACT +
Preference number: 5 (lower is better)
Translates to: QLSCCSTIHHRPPQQ*YTPPQHLCLTKLST
Trigger: AGTTGATAGTTTTGTCAGGCAGAGGTGTTGTGGAGGAGTGTATCATTGCTGAGGAGGTCTATGATGGATGGTAGAGCAGCAACTAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS TCA 90 bp TCTGCCTGGAGCGAACTAGTCTCAACTATTGCTCATGTCCAGAATTaGGGCAACGAAGGCAAGAGCAAGAAGAAACCCCAGAATCTAATC +
Preference number: 5 (lower is better)
Translates to: SAWSELVSTIAHVQN*GNEGKSKKKPQNLI
Trigger: GATTAGATTCTGGGGTTTCTTCTTGCTCTTGCCTTCGTTGCCTCAATTCTGGACATGAGCAATAGTTGAGACTAGTTCGCTCCAGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CCA 90 bp AGAGTCAACGAGGCCATGCTGATAATAGTTTCTGGAAGGGATCTCTaGAATTGGTCTGACCCAATTAACACACGGCCTCTGATGGGAATA +
Preference number: 5 (lower is better)
Translates to: RVNEAMLIIVSGRDL*NWSDPINTRPLMGI
Trigger: TATTCCCATCAGAGGCCGTGTGTTAATTGGGTCAGACCAATTCCAGAGATCCCTTCCAGAAACTATTATCAGCATGGCCTCGTTGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS-3UTR CAA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCGACAGAGATGAAATATaGCTCAGAATCGACACCACC +
Preference number: 5 (lower is better)
Translates to: GSWETHTSIALTNTRHTGDRDEI*LRIDTT
Trigger: GGTGGTGTCGATTCTGAGCAATATTTCATCTCTGTC...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp GGTTCATGGGAAACACACACATCCATTGCCCTGACAAACACTAGACATACAGGCGTAGGTATTGCTAGGTaGCGTGACAGCAATGGTAAT +
Preference number: 5 (lower is better)
Translates to: GSWETHTSIALTNTRHTGVGIAR*RDSNGN
Trigger: ATTACCATTGCTGTCACGCAACCTAGCAATACCTAC...GCCTGTATGTCTAGTGTTTGTCAGGGCAATGGATGTGTGTGTTTCCCATGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp AAGTTTCTGCCCTACTGCTATTGTTTTGTAGTTCTACTCACTGACCCACAGTTTGATGACATTCACAGCTaGGGAGTGCTCCAGCCGTGT +
Preference number: 5 (lower is better)
Translates to: KFLPYCYCFVVLLTDPQFDDIHS*GVLQPC
Trigger: ACACGGCTGGAGCACTCCCAAGCTGTGAATGTCATC...AAACTGTGGGTCAGTGAGTAGAACTACAAAACAATAGCAGTAGGGCAGAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS TCA 90 bp ATAGACCTCCTCAGCAATGATACACTCCTCCACAACACCTCTGCCTaGCAAAACTATCAACTCTGTCTTTTGAGCTGCAACCTAGACTCT +
Preference number: 5 (lower is better)
Translates to: IDLLSNDTLLHNTSA*QNYQLCLLSCNLDS
Trigger: AGAGTCTAGGTTGCAGCTCAAAAGACAGAGTTGATAGTTTTGTCAGGCAGAGGTGTTGTGGAGGAGTGTATCATTGCTGAGGAGGTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS TCA 90 bp GAATGCGTTGTAAGATGGGAAGAGAGAGAAACATACATGGAGATTTaGCTACTGGGCTTGTGCCAGCCCCCGTTTTGTCACAAGATTTGT +
Preference number: 5 (lower is better)
Translates to: ECVVRWEERETYMEI*LLGLCQPPFCHKIC
Trigger: ACAAATCTTGTGACAAAACGGGGGCTGGCACAAGCCCAGTAGTCAAATCTCCATGTATGTTTCTCTCTCTTCCCATCTTACAACGCATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CCA 90 bp AACGAGGCCATGCTGATAATAGTTTCTGGAAGGGATCTCTGGAATTaGTCTGACCCAATTAACACACGGCCTCTGATGGGAATAGATGTA +
Preference number: 5 (lower is better)
Translates to: NEAMLIIVSGRDLWN*SDPINTRPLMGIDV
Trigger: TACATCTATTCCCATCAGAGGCCGTGTGTTAATTGGGTCAGACCAATTCCAGAGATCCCTTCCAGAAACTATTATCAGCATGGCCTCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS CCA 90 bp CATGGAAAGAGGCTGGAAAGCAACACAAGAGAACTTTTGGGGTTATaGGAATGTTCCATCTTGACAGGAAGGGACTTGCACAAGCGTTTT +
Preference number: 5 (lower is better)
Translates to: HGKRLESNTRELLGL*ECSILTGRDLHKRF
Trigger: AAAACGCTTGTGCAAGTCCCTTCCTGTCAAGATGGAACATTCCCATAACCCCAAAAGTTCTCTTGTGTTGCTTTCCAGCCTCTTTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CCA 90 bp TTCTTTCTTGAGGCTCCCATCTACTTTTACTACACCAGGCTAACTTaGAAAGCAGCAAAGGAAGGCAGTCCCCTTCCACTCAACATTAAG +
Preference number: 5 (lower is better)
Translates to: FFLEAPIYFYYTRLT*KAAKEGSPLPLNIK
Trigger: CTTAATGTTGAGTGGAAGGGGACTGCCTTCCTTTGCTGCTTTCCAAGTTAGCCTGGTGTAGTAAAAGTAGATGGGAGCCTCAAGAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS-3UTR CAA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCGTTCCCTCCACCTCTTaGGACAACCCTATCAGAGAG +
Preference number: 5 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSVPSTS*DNPIRE
Trigger: CTCTCTGATAGGGTTGTCCAAAGAGGTGGAGGGAAC...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTTTCACCTCCCACTTCTaGATGCTGGGTTCCCTCCAC +
Preference number: 5 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNIFTSHF*MLGSLH
Trigger: GTGGAGGGAACCCAGCATCAAGAAGTGGGAGGTGAA...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp TTCAAGTTTCTGCCCTACTGCTATTGTTTTGTAGTTCTACTCACTGACCCACAGCCATTGCACTCCAACTaGGGCGACAAGAGTGACATT +
Preference number: 5 (lower is better)
Translates to: FKFLPYCYCFVVLLTDPQPLHSN*GDKSDI
Trigger: AATGTCACTCTTGTCGCCCAAGTTGGAGTGCAATGG...CTGTGGGTCAGTGAGTAGAACTACAAAACAATAGCAGTAGGGCAGAAACTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR CAA 90 bp TGCAAAGATATCTCACCCAAAGCCCCACTTCTGGCTCCGAATTATGAGGCATCATCTGCCCTACTGCTATaGTTTTGTAGTTCTACTCAC +
Preference number: 5 (lower is better)
Translates to: CKDISPKAPLLAPNYEASSALLL*FCSSTH
Trigger: GTGAGTAGAACTACAAAACAATAGCAGTAGGGCAGA...TGATGCCTCATAATTCGGAGCCAGAAGTGGGGCTTTGGGTGAGATATCTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS TCA 90 bp GGTAGGTCTACTGGTAGTAATCCTGTTATGTTCACCACGCTACACTaGGAATGCGTTGTAAGATGGGAAGAGAGAGAAACATACATGGAG +
Preference number: 5 (lower is better)
Translates to: GRSTGSNPVMFTTLH*ECVVRWEERETYME
Trigger: CTCCATGTATGTTTCTCTCTCTTCCCATCTTACAACGCATTCTCAGTGTAGCGTGGTGAACATAACAGGATTACTACCAGTAGACCTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS GCA 90 bp GTCTTCACAGGTACACTGCAGGACTCCATTCAGGCTGTTGCAGTCTaGACAAGAAATAGAACTCAGTCTCATGGATTCTGGTTTATAAAC +
Preference number: 5 (lower is better)
Translates to: VFTGTLQDSIQAVAV*TRNRTQSHGFWFIN
Trigger: GTTTATAAACCAGAATCCATGAGACTGAGTTCTATTTCTTGTGCAGACTGCAACAGCCTGAATGGAGTCCTGCAGTGTACCTGTGAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493249.5
CDS CCA 90 bp ACTGTGTGCAAGTTATACCTCAATAAAAGAAATTATAGCACAGGATaGCTCCAGGATTGGGTCTCTGCAAGTGGAAGGACAGCATTGCTG +
Preference number: 5 (lower is better)
Translates to: TVCKLYLNKRNYSTG*LQDWVSASGRTALL
Trigger: CAGCAATGCTGTCCTTCCACTTGCAGAGACCCAATCCTGGAGCCATCCTGTGCTATAATTTCTTTTATTGAGGTATAACTTGCACACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CCA 90 bp ACTAAACTAACCTGTGATGATAAAAATCATACAAGTGGTTGCTTCTaGCGTGAGGGGATGGCATGGAAAGAGGCTGGAAAGCAACACAAG +
Preference number: 5 (lower is better)
Translates to: TKLTCDDKNHTSGCF*REGMAWKEAGKQHK
Trigger: CTTGTGTTGCTTTCCAGCCTCTTTCCATGCCATCCCCTCACGCCAGAAGCAACCACTTGTATGATTTTTATCATCACAGGTTAGTTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CCA 90 bp TATTCTGGGGTTTTCTACTGCAGCAGCAGAAGCAAGGTCTCTGGCTaGAATAGAAGTTCTGCTCAATATGGAAATCTACTTGCTGAACAG +
Preference number: 5 (lower is better)
Translates to: YSGVFYCSSRSKVSG*NRSSAQYGNLLAEQ
Trigger: CTGTTCAGCAAGTAGATTTCCATATTGAGCAGAACTTCTATTCCAGCCAGAGACCTTGCTTCTGCTGCTGCAGTAGAAAACCCCAGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS-3UTR CAA 90 bp ATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAATCTGAGAAAGCCAGGAGTGGTTaGCTTCCATTGGACCAGTTA +
Preference number: 5 (lower is better)
Translates to: IRLPSAMHPNCCGSEKSEKARSG*LPLDQL
Trigger: TAACTGGTCCAATGGAAGCAAACCACTCCTGGCTTT...CTCAGATTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp ATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAATCTGAGAAGGCAGACAACTTGTaGAACAGAAGTTGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: IRLPSAMHPNCCGSEKSEKADNL*NRSCRS
Trigger: GCTGCGACAACTTCTGTTCAACAAGTTGTCTGCCTT...CTCAGATTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp AAGTTTCTGCCCTACTGCTATTGTTTTGTAGTTCTACTCACTGACCCACAGTTTACTCCATTCAGGCTGTaGCAGTCTGTGGTAGCCTTT +
Preference number: 5 (lower is better)
Translates to: KFLPYCYCFVVLLTDPQFTPFRL*QSVVAF
Trigger: AAAGGCTACCACAGACTGCAACAGCCTGAATGGAGT...AAACTGTGGGTCAGTGAGTAGAACTACAAAACAATAGCAGTAGGGCAGAAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS-3UTR CAA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTCATGTGTGCTGCACCTaGGTGCCTTGTGGAAGTCTA +
Preference number: 5 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNIHVCCT*VPCGSL
Trigger: TAGACTTCCACAAGGCACCAAGGTGCAGCACACATG...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp GAGCTATCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGGCTGCCTCAGTGGCATaGCCTACAATCATACTGAAA +
Preference number: 5 (lower is better)
Translates to: ELSELSEKSSLTKFEVKEAASVA*PTIILK
Trigger: TTTCAGTATGATTGTAGGCAATGCCACTGAGGCAGC...CTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGATAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCTCCTCCATTGTTGAATaGGACACCCTGAAATGGCTG +
Preference number: 5 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSSSIVE*DTLKWL
Trigger: CAGCCATTTCAGGGTGTCCAATTCAACAATGGAGGA...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp CATGTGTGCTGCACCTTGGTGCCTTGTGGAAGTCTAACTTTGAATTTCTCTCAGTTGTTTTGCAGTGGGTaGAAAGGCTTTGAGAATTTG +
Preference number: 5 (lower is better)
Translates to: HVCCTLVPCGSLTLNFSQLFCSG*KGFENL
Trigger: CAAATTCTCAAAGCCTTTCAACCCACTGCAAAACAA...CTGAGAGAAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTACTCCATTCAGGCTGTaGCAGTCTGTGGTAGCCTTT +
Preference number: 5 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNITPFRL*QSVVAF
Trigger: AAAGGCTACCACAGACTGCAACAGCCTGAATGGAGT...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTGCTTCCATTTCGAAATaGGGTGACCTGAACCGACTC +
Preference number: 5 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNIASISK*GDLNRL
Trigger: GAGTCGGTTCAGGTCACCCAATTTCGAAATGGAAGC...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp CATGTGTGCTGCACCTTGGTGCCTTGTGGAAGTCTAACTTTGAATTTCTCTCAGCCTTGCCTTATTCATTaGAGACAAACTGAGTTAGCA +
Preference number: 5 (lower is better)
Translates to: HVCCTLVPCGSLTLNFSQPCLIH*RQTELA
Trigger: TGCTAACTCAGTTTGTCTCAAATGAATAAGGCAAGG...CTGAGAGAAATTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAGCACACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp GAGCTATCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGTCTGCCTTGACACTTTaGTTTGCAGGGTTTAGGACC +
Preference number: 5 (lower is better)
Translates to: ELSELSEKSSLTKFEVKESALTL*FAGFRT
Trigger: GGTCCTAAACCCTGCAAACAAAAGTGTCAAGGCAGA...CTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGATAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS TCA 90 bp CATTGCACTCCAACTTGGGCGACAAGAGTGACATTCGAAATTGGGTaGCCTGAACCGACTCAAAACCTTGAATTCTTTCATATGCTTTTT +
Preference number: 5 (lower is better)
Translates to: HCTPTWATRVTFEIG*PEPTQNLEFFHMLF
Trigger: AAAAAGCATATGAAAGAATTCAAGGTTTTGAGTCGGTTCAGGTCACCCAATTTCGAATGTCACTCTTGTCGCCCAAGTTGGAGTGCAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371243.2
ENST00000419892.6
ENST00000477771.5
CDS-3UTR CAA 90 bp GCAAGAATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAACTTTTGAGTTGGCTTTaGTTCACTGGAATCCCTTTC +
Preference number: 5 (lower is better)
Translates to: ARIRLPSAMHPNCCGSEKLLSWL*FTGIPF
Trigger: GAAAGGGATTCCAGTGAACAAAAGCCAACTCAAAAG...TTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCCTGGCTTCACAATCTTaGGCAAGTCACTTTACCTCT +
Preference number: 5 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSLASQS*ASHFTS
Trigger: AGAGGTAAAGTGACTTGCCAAAGATTGTGAAGCCAG...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTCTCCTTCTCTCACTTTaGTGGGTAGGTAGAGTGAGA +
Preference number: 5 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNILLLSL*WVGRVR
Trigger: TCTCACTCTACCTACCCACAAAAGTGAGAGAAGGAG...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp GCAAGAATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAATGCTGGTTGACATTTTaGCTAAGATTTCTCCCTCTC +
Preference number: 5 (lower is better)
Translates to: ARIRLPSAMHPNCCGSEKCWLTF*LRFLPL
Trigger: GAGAGGGAGAAATCTTAGCAAAAATGTCAACCAGCA...TTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS TCA 90 bp TTCTGGTATAGATATATCCTTACTTGTACTAAGCCTGCTGGCTTATaGCTCACACCTTCACTCTTCTCTTTAATTCCCAGGTCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: FWYRYILTCTKPAGL*LTPSLFSLIPRSSG
Trigger: TCCAGAAGACCTGGGAATTAAAGAGAAGAGTGAAGGTGTGAGTCATAAGCCAGCAGGCTTAGTACAAGTAAGGATATATCTATACCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS TCA 90 bp TGGGGATGCCCTTCTAAGACCATTGTGTTACTTACCGAAATTGGGTaGCCTGAACCGACTCAAAACCTTGAATTCTTTCATATGCTTTTT +
Preference number: 5 (lower is better)
Translates to: WGCPSKTIVLLTEIG*PEPTQNLEFFHMLF
Trigger: AAAAAGCATATGAAAGAATTCAAGGTTTTGAGTCGGTTCAGGTCACCCAATTTCGGTAAGTAACACAATGGTCTTAGAAGGGCATCCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491283.5
CDS GCA 90 bp CACTACTTATTTATTCATTCACTCCCGGCCTATGCTGTGTGTACATaGCATGGGGTCCATAGGAATAAAGTAAACAGAGCTTACATTCTA +
Preference number: 5 (lower is better)
Translates to: HYLFIHSLPAYAVCT*HGVHRNKVNRAYIL
Trigger: TAGAATGTAAGCTCTGTTTACTTTATTCCTATGGACCCCATGGCATGTACACACAGCATAGGCCGGGAGTGAATGAATAAATAAGTAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS GCA 90 bp TGCTGGAGCCAACAACTTCATACCCAGCAACGATGCTTCCATTTCTaGAGTGATTATGGGGAAAGAGAAATGAGATTCACTACTTATTTA +
Preference number: 5 (lower is better)
Translates to: CWSQQLHTQQRCFHF*SDYGEREMRFTTYL
Trigger: TAAATAAGTAGTGAATCTCATTTCTCTTTCCCCATAATCACTGCAGAAATGGAAGCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS-3UTR CAA 90 bp TTTATTGGCTGTAGAAATGGTCTGGGAGACAAATGTCCTAAAAATCCCCAATTTGTTCTCTCACAGAAATaGACACTCTGGCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: FIGCRNGLGDKCPKNPQFVLSQK*TLWLRL
Trigger: CAACCTCAGCCAGAGTGTCAATTTCTGTGAGAGAAC...AAATTGGGGATTTTTAGGACATTTGTCTCCCAGACCATTTCTACAGCCAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp GAGCTATCTGAGCTATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCTTCTCTCACTAAATTaGAGGTCAAGGAGCAGACAT +
Preference number: 5 (lower is better)
Translates to: ELSELSEKSSLTKFEVKELLSLN*RSRSRH
Trigger: ATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAG...CTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATAGCTCAGATAGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp GCAAGAATCAGACTTCCATCAGCCATGCATCCTAATTGTTGTGGTTCTGAGAAAGCTGAATTAAGGATATaGTCAGCTATACTGATGACA +
Preference number: 5 (lower is better)
Translates to: ARIRLPSAMHPNCCGSEKAELRI*SAILMT
Trigger: TGTCATCAGTATAGCTGACAATATCCTTAATTCAGC...TTTCTCAGAACCACAACAATTAGGATGCATGGCTGATGGAAGTCTGATTCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCCTTCCTTCAGTATACTaGTGGCTCAATCACTTCTTA +
Preference number: 5 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSLPSVY*WLNHFL
Trigger: TAAGAAGTGATTGAGCCACAAGTATACTGAAGGAAG...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCTTTTCAAGGCTTTTATaGGCTGTAGAAATGGTCTGG +
Preference number: 5 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSFSRLL*AVEMVW
Trigger: CCAGACCATTTCTACAGCCAATAAAAGCCTTGAAAA...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp CACTGGCTGTACAAGAAAATAACTTCCACAAAGTGCCTATGGTGTATTATGAAATCAACTCCTGCTGCTTaGTATGTCATCCAAAAGTGG +
Preference number: 5 (lower is better)
Translates to: HWLYKKITSTKCLWCIMKSTPAA*YVIQKW
Trigger: CCACTTTTGGATGACATACAAAGCAGCAGGAGTTGA...TTTCATAATACACCATAGGCACTTTGTGGAAGTTATTTTCTTGTACAGCCAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp AACCTACTCTTCTGCATTTATGGAGCACTTTCTTTGAATCAAATCACATGGAAACTGCACCTTGGTGCCTaGTGGAAGTCTAACTTTGAA +
Preference number: 5 (lower is better)
Translates to: NLLFCIYGALSLNQITWKLHLGA*WKSNFE
Trigger: TTCAAAGTTAGACTTCCACAAGGCACCAAGGTGCAG...TTTCCATGTGATTTGATTCAAAGAAAGTGCTCCATAAATGCAGAAGAGTAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp TATCTGAGAAATCTTCTCTCACTAAATTTGAGGTCAAGGAGCAGACATTCCTCCGACTCTCATACATATTaGTGGGGTATAGAACCATCT +
Preference number: 5 (lower is better)
Translates to: YLRNLLSLNLRSRSRHSSDSHTY*WGIEPS
Trigger: AGATGGTTCTATACCCCACAAATATGTATGAGAGTC...GGAGGAATGTCTGCTCCTTGACCTCAAATTTAGTGAGAGAAGATTTCTCAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp CACTGGCTGTACAAGAAAATAACTTCCACAAAGTGCCTATGGTGTATTATGAAAAGTAAGACTGTCCAGTaGGTTACTGAGGCTGAATTA +
Preference number: 5 (lower is better)
Translates to: HWLYKKITSTKCLWCIMKSKTVQ*VTEAEL
Trigger: TAATTCAGCCTCAGTAACCAACTGGACAGTCTTACT...TTTCATAATACACCATAGGCACTTTGTGGAAGTTATTTTCTTGTACAGCCAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp AACCTACTCTTCTGCATTTATGGAGCACTTTCTTTGAATCAAATCACATGGAAACCCAGCTGTCTTTATTaGCATAGCATGAAGGCTTTC +
Preference number: 5 (lower is better)
Translates to: NLLFCIYGALSLNQITWKPSCLY*HSMKAF
Trigger: GAAAGCCTTCATGCTATGCAAATAAAGACAGCTGGG...TTTCCATGTGATTTGATTCAAAGAAAGTGCTCCATAAATGCAGAAGAGTAGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS TCA 90 bp TTTATGATTCCTTGCCTTATTCATTTGAGACAAACTGAGTTAGCATaGTGTTGTCGGAGGAATCTCCAGTATGAGAAAATGCATAATGGC +
Preference number: 5 (lower is better)
Translates to: FMIPCLIHLRQTELA*CCRRNLQYEKMHNG
Trigger: GCCATTATGCATTTTCTCATACTGGAGATTCCTCCGACAACATCATGCTAACTCAGTTTGTCTCAAATGAATAAGGCAAGGAATCATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
ENST00000477858.1
CDS-3UTR CAA 90 bp TTCCATCAGATACATTCCAGTTGTATGCCAACATACTCAGGTAAGAGCAACATTTTTGAGAATTTGGGTTaGGCAGATAAATCTGATGAG +
Preference number: 5 (lower is better)
Translates to: FHQIHSSCMPTYSGKSNIFENLG*ADKSDE
Trigger: CTCATCAGATTTATCTGCCAAACCCAAATTCTCAAA...AATGTTGCTCTTACCTGAGTATGTTGGCATACAACTGGAATGTATCTGATGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS-3UTR CAA 90 bp AACCTACTCTTCTGCATTTATGGAGCACTTTCTTTGAATCAAATCACATGGAAATATGGAAGAGAAGTGTaGCTTCACATAGCGTCAACT +
Preference number: 5 (lower is better)
Translates to: NLLFCIYGALSLNQITWKYGREV*LHIAST
Trigger: AGTTGACGCTATGTGAAGCAACACTTCTCTTCCATA...TTTCCATGTGATTTGATTCAAAGAAAGTGCTCCATAAATGCAGAAGAGTAGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371253.7
CDS GCA 90 bp TCAAAGCTGATAGAGTCATACACAAAGTTTGAGCACATAACTGTGTaGAAGTTATACCTCAATAAAAGAAATTATAGCACAGGATGGCTC +
Preference number: 5 (lower is better)
Translates to: SKLIESYTKFEHITV*KLYLNKRNYSTGWL
Trigger: GAGCCATCCTGTGCTATAATTTCTTTTATTGAGGTATAACTTGCACACAGTTATGTGCTCAAACTTTGTGTATGACTCTATCAGCTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS-3UTR CAA 90 bp GACTACTGGGTTTTGAACTATGATGTATACATGTTATCTGTGCAAAGATATCTCCTTCCTTCAGTATACTaGTGGCTCAATCACTTCTTA +
Preference number: 5 (lower is better)
Translates to: DYWVLNYDVYMLSVQRYLLPSVY*WLNHFL
Trigger: TAAGAAGTGATTGAGCCACAAGTATACTGAAGGAAG...GAGATATCTTTGCACAGATAACATGTATACATCATAGTTCAAAACCCAGTAGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371243.2
CDS GCA 72 bp GCTGAGGTTGTTGAGATGACATTCACAGCTTGGGAGTaGTCCAGCCGTGTGAAGGTAGCAGTTCTGGGGATC +
Preference number: 6 (lower is better)
Translates to: AEVVEMTFTAWE*SSRVKVAVLGI
Trigger: GATCCCCAGAACTGCTACCTTCACACGGCTGGAGCACTCCCAAGCTGTGAATGTCATCTCAACAACCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000371243.2
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
ENST00000471487.5
ENST00000474800.1
ENST00000475745.5
ENST00000477771.5
ENST00000487323.5
ENST00000491283.5
ENST00000493249.5
CDS TCA 72 bp GGCTGTCTTAGCCTTCTCGGCAACATGTTCAATGGCTaGCAGCAGTTCAGATGCACTGCTGGAGCCAACAAC +
Preference number: 6 (lower is better)
Translates to: GCLSLLGNMFNG*QQFRCTAGANN
Trigger: GTTGTTGGCTCCAGCAGTGCATCTGAACTGCTGTCAGCCATTGAACATGTTGCCGAGAAGGCTAAGACAGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
ENST00000471487.5
ENST00000493249.5
CDS TCA 72 bp TCAGTCTTTCCCCAACAGTCGGCCTCCAGAGCTTTGTaGGAACTAGCAGCACCACAACGAAGTTCACAGCCA +
Preference number: 6 (lower is better)
Translates to: SVFPQQSASRAL*ELAAPQRSSQP
Trigger: TGGCTGTGAACTTCGTTGTGGTGCTGCTAGTTCTCACAAAGCTCTGGAGGCCGACTGTTGGGGAAAGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS TCA 72 bp ACCAAGTGGAGACTGTCAAGTAGGCCGTTGGTTATTTaGGTCTGGAGTTCAGGGGAGTGCCCGAGCTCAAGT +
Preference number: 6 (lower is better)
Translates to: TKWRLSSRPLVI*VWSSGECPSSS
Trigger: ACTTGAGCTCGGGCACTCCCCTGAACTCCAGACTCAAATAACCAACGGCCTACTTGACAGTCTCCACTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS GCA 72 bp CAGCACCACAACGAAGTTCACAGCCACAATAGCCAGTaGAGGGACAACAAAAGCCAGGAGTGGTTTGCTTCC +
Preference number: 6 (lower is better)
Translates to: QHHNEVHSHNSQ*RDNKSQEWFAS
Trigger: GGAAGCAAACCACTCCTGGCTTTTGTTGTCCCTGCACTGGCTATTGTGGCTGTGAACTTCGTTGTGGTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS GCA 72 bp CTATCAACTCTGTCTTTTGAGCTGCAACCTAGACTCTaGTGCCCAGACGCTACCACTCATGCACGACTCCAC +
Preference number: 6 (lower is better)
Translates to: LSTLSFELQPRL*CPDATTHARLH
Trigger: GTGGAGTCGTGCATGAGTGGTAGCGTCTGGGCAGCAGAGTCTAGGTTGCAGCTCAAAAGACAGAGTTGATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CCA 72 bp GCTGGAAAACCAAGTGGAGACTGTCAAGTAGGCCGTTaGTTATTTGAGTCTGGAGTTCAGGGGAGTGCCCGA +
Preference number: 6 (lower is better)
Translates to: AGKPSGDCQVGR*LFESGVQGSAR
Trigger: TCGGGCACTCCCCTGAACTCCAGACTCAAATAACCAACGGCCTACTTGACAGTCTCCACTTGGTTTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CAA 72 bp ACGACTCCACGGGTTCACCAGGGTCTGATGTCATCCTaGCTCTTTGCATACTGGCCAATGATGCACGTAGGT +
Preference number: 6 (lower is better)
Translates to: TTPRVHQGLMSS*LFAYWPMMHVG
Trigger: ACCTACGTGCATCATTGGCCAGTATGCAAAGAGCAAGGATGACATCAGACCCTGGTGAACCCGTGGAGTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CAA 90 bp CACTCATGCACGACTCCACGGGTTCACCAGGGTCTGATGTCATCCTaGCTCTTTGCATACTGGCCAATGATGCACGTAGGTATACTTACC +
Preference number: 6 (lower is better)
Translates to: HSCTTPRVHQGLMSS*LFAYWPMMHVGILT
Trigger: GGTAAGTATACCTACGTGCATCATTGGCCAGTATGCAAAGAGCAAGGATGACATCAGACCCTGGTGAACCCGTGGAGTCGTGCATGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS TCA 72 bp CTAGGTGGCAGCCTGCATCGTTCCACTGCAAATGACTaGAATCCCAAAACACACAATGAGGCTGGCTCAGGT +
Preference number: 6 (lower is better)
Translates to: LGGSLHRSTAND*NPKTHNEAGSG
Trigger: ACCTGAGCCAGCCTCATTGTGTGTTTTGGGATTTCAGTCATTTGCAGTGGAACGATGCAGGCTGCCACCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS CCA 72 bp CGTAGGTATACTTACCCTCCACCTAGCCATGCTCACTaGGATATTGCCACTCTGAAACTCAAGACCAGGGCA +
Preference number: 6 (lower is better)
Translates to: RRYTYPPPSHAH*DIATLKLKTRA
Trigger: TGCCCTGGTCTTGAGTTTCAGAGTGGCAATATCCCAGTGAGCATGGCTAGGTGGAGGGTAAGTATACCTACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CAA 90 bp GAATTGGACACCCTGAAATGGCTGGCCAGTGACAGAGATGAAATATaGCTCAGAATCGACACCACCGAAGCCAGATTCCCCACTGTGGTT +
Preference number: 6 (lower is better)
Translates to: ELDTLKWLASDRDEI*LRIDTTEARFPTVV
Trigger: AACCACAGTGGGGAATCTGGCTTCGGTGGTGTCGATTCTGAGCAATATTTCATCTCTGTCACTGGCCAGCCATTTCAGGGTGTCCAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS TCA 72 bp CTCCACCTAGCCATGCTCACTGGGATATTGCCACTCTaGAACTCAAGACCAGGGCAAGTCTACACAGTGAAA +
Preference number: 6 (lower is better)
Translates to: LHLAMLTGILPL*NSRPGQVYTVK
Trigger: TTTCACTGTGTAGACTTGCCCTGGTCTTGAGTTTCAGAGTGGCAATATCCCAGTGAGCATGGCTAGGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS GCA 72 bp CAACATGTTCAATGGCTGACAGCAGTTCAGATGCACTaGTGGAGCCAACAACTTCATACCCAGCAACGATGC +
Preference number: 6 (lower is better)
Translates to: QHVQWLTAVQMH*WSQQLHTQQRC
Trigger: GCATCGTTGCTGGGTATGAAGTTGTTGGCTCCAGCAGTGCATCTGAACTGCTGTCAGCCATTGAACATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
ENST00000471487.5
ENST00000493249.5
CDS GCA 72 bp CTTCCACTCAACATTAAGTCCACTCAGGCGCCCAAGTaGCCGCCATTTTCCTTCTTGTTCTTCTCAACTGAC +
Preference number: 6 (lower is better)
Translates to: LPLNIKSTQAPK*PPFSFLFFSTD
Trigger: GTCAGTTGAGAAGAACAAGAAGGAAAATGGCGGGCACTTGGGCGCCTGAGTGGACTTAATGTTGAGTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CAA 72 bp CTGGTGCCCAATTCTGGGGATGCCCTTCTAAGACCATaGTGTTACTTACCGAAATTGGGTGACCTGAACCGA +
Preference number: 6 (lower is better)
Translates to: LVPNSGDALLRP*CYLPKLGDLNR
Trigger: TCGGTTCAGGTCACCCAATTTCGGTAAGTAACACAATGGTCTTAGAAGGGCATCCCCAGAATTGGGCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491283.5
CDS CAA 90 bp AGGGGATGGCATGGAAAGAGGCTGGAAAGCAACACAAGAGAACTTTaGGGGTTATGGGAATGTTCCATCTTGACAGGAAGGGACTTGCAC +
Preference number: 6 (lower is better)
Translates to: RGWHGKRLESNTREL*GLWECSILTGRDLH
Trigger: GTGCAAGTCCCTTCCTGTCAAGATGGAACATTCCCATAACCCCAAAAGTTCTCTTGTGTTGCTTTCCAGCCTCTTTCCATGCCATCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS TCA 72 bp ACAGGGAACTCAGTTAGGAAAGAGCTGGTGGTGGCTTaGACTAGCTGGGTAGCTATGCATGTGGTCAAATTC +
Preference number: 6 (lower is better)
Translates to: TGNSVRKELVVA*TSWVAMHVVKF
Trigger: GAATTTGACCACATGCATAGCTACCCAGCTAGTTCAAGCCACCACCAGCTCTTTCCTAACTGAGTTCCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS GCA 72 bp ACGGGTTCACCAGGGTCTGATGTCATCCTTGCTCTTTaGATACTGGCCAATGATGCACGTAGGTATACTTAC +
Preference number: 6 (lower is better)
Translates to: TGSPGSDVILAL*ILANDARRYTY
Trigger: GTAAGTATACCTACGTGCATCATTGGCCAGTATGCAAAGAGCAAGGATGACATCAGACCCTGGTGAACCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS GCA 72 bp GGTACACTGCAGGACTCCATTCAGGCTGTTGCAGTCTaGACAAGAAATAGAACTCAGTCTCATGGATTCTGG +
Preference number: 6 (lower is better)
Translates to: GTLQDSIQAVAV*TRNRTQSHGFW
Trigger: CCAGAATCCATGAGACTGAGTTCTATTTCTTGTGCAGACTGCAACAGCCTGAATGGAGTCCTGCAGTGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493249.5
CDS CCA 72 bp CATACAAGTGGTTGCTTCTGGCGTGAGGGGATGGCATaGAAAGAGGCTGGAAAGCAACACAAGAGAACTTTT +
Preference number: 6 (lower is better)
Translates to: HTSGCFWREGMA*KEAGKQHKRTF
Trigger: AAAAGTTCTCTTGTGTTGCTTTCCAGCCTCTTTCCATGCCATCCCCTCACGCCAGAAGCAACCACTTGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CCA 72 bp AATGCTGTTTTCTGTTCAAGCCACCTGGGATCTGCCTaGAGCGAACTAGTCTCAACTATTGCTCATGTCCAG +
Preference number: 6 (lower is better)
Translates to: NAVFCSSHLGSA*SELVSTIAHVQ
Trigger: CTGGACATGAGCAATAGTTGAGACTAGTTCGCTCCAGGCAGATCCCAGGTGGCTTGAACAGAAAACAGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CAA 72 bp ATAGCCAGTGCAGGGACAACAAAAGCCAGGAGTGGTTaGCTTCCATTGGACCAGTTAAGCCAACACACATCT +
Preference number: 6 (lower is better)
Translates to: IASAGTTKARSG*LPLDQLSQHTS
Trigger: AGATGTGTGTTGGCTTAACTGGTCCAATGGAAGCAAACCACTCCTGGCTTTTGTTGTCCCTGCACTGGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS CAA 72 bp TCCACTCAGGCGCCCAAGTGCCCGCCATTTTCCTTCTaGTTCTTCTCAACTGACAATGCTGTTTTCTGTTCA +
Preference number: 6 (lower is better)
Translates to: STQAPKCPPFSF*FFSTDNAVFCS
Trigger: TGAACAGAAAACAGCATTGTCAGTTGAGAAGAACAAGAAGGAAAATGGCGGGCACTTGGGCGCCTGAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CAA 90 bp ACAGCCACAATAGCCAGTGCAGGGACAACAAAAGCCAGGAGTGGTTaGCTTCCATTGGACCAGTTAAGCCAACACACATCTTTCCTTTTG +
Preference number: 6 (lower is better)
Translates to: TATIASAGTTKARSG*LPLDQLSQHTSFLL
Trigger: CAAAAGGAAAGATGTGTGTTGGCTTAACTGGTCCAATGGAAGCAAACCACTCCTGGCTTTTGTTGTCCCTGCACTGGCTATTGTGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS CAA 90 bp AACATTAAGTCCACTCAGGCGCCCAAGTGCCCGCCATTTTCCTTCTaGTTCTTCTCAACTGACAATGCTGTTTTCTGTTCAAGCCACCTG +
Preference number: 6 (lower is better)
Translates to: NIKSTQAPKCPPFSF*FFSTDNAVFCSSHL
Trigger: CAGGTGGCTTGAACAGAAAACAGCATTGTCAGTTGAGAAGAACAAGAAGGAAAATGGCGGGCACTTGGGCGCCTGAGTGGACTTAATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CAA 90 bp TTTGCAGAACTGGTGCCCAATTCTGGGGATGCCCTTCTAAGACCATaGTGTTACTTACCGAAATTGGGTGACCTGAACCGACTCAAAACC +
Preference number: 6 (lower is better)
Translates to: FAELVPNSGDALLRP*CYLPKLGDLNRLKT
Trigger: GGTTTTGAGTCGGTTCAGGTCACCCAATTTCGGTAAGTAACACAATGGTCTTAGAAGGGCATCCCCAGAATTGGGCACCAGTTCTGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491283.5
CDS TCA 72 bp ACTCTGAAAGAGCCGTCTTCTAATGGAAACAGCTTGTaGAGGGCTGTCTTAGCCTTCTCGGCAACATGTTCA +
Preference number: 6 (lower is better)
Translates to: TLKEPSSNGNSL*RAVLAFSATCS
Trigger: TGAACATGTTGCCGAGAAGGCTAAGACAGCCCTTCACAAGCTGTTTCCATTAGAAGACGGCTCTTTCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
ENST00000471487.5
ENST00000493249.5
CDS TCA 72 bp AGCAACATAGCAAGACCTCAACTAATTAGCCAAGAATaGTGGCAAGTGCCTGTGATCCTAGCTACCAGGGAG +
Preference number: 6 (lower is better)
Translates to: SNIARPQLISQE*WQVPVILATRE
Trigger: CTCCCTGGTAGCTAGGATCACAGGCACTTGCCATCATTCTTGGCTAATTAGTTGAGGTCTTGCTATGTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS TCA 72 bp AGAGTCAGAGGATTCCCAGTTTGGACACATGACATTTaGCATCCCAGCTGGAAAACCAAGTGGAGACTGTCA +
Preference number: 6 (lower is better)
Translates to: RVRGFPVWTHDI*HPSWKTKWRLS
Trigger: TGACAGTCTCCACTTGGTTTTCCAGCTGGGATGTCAAATGTCATGTGTCCAAACTGGGAATCCTCTGACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS TCA 72 bp AGCGAACTAGTCTCAACTATTGCTCATGTCCAGAATTaGGGCAACGAAGGCAAGAGCAAGAAGAAACCCCAG +
Preference number: 6 (lower is better)
Translates to: SELVSTIAHVQN*GNEGKSKKKPQ
Trigger: CTGGGGTTTCTTCTTGCTCTTGCCTTCGTTGCCTCAATTCTGGACATGAGCAATAGTTGAGACTAGTTCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS TCA 72 bp CAAGTGCCCGCCATTTTCCTTCTTGTTCTTCTCAACTaGCAATGCTGTTTTCTGTTCAAGCCACCTGGGATC +
Preference number: 6 (lower is better)
Translates to: QVPAIFLLVLLN*QCCFLFKPPGI
Trigger: GATCCCAGGTGGCTTGAACAGAAAACAGCATTGTCAGTTGAGAAGAACAAGAAGGAAAATGGCGGGCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS GCA 72 bp CTGAGGCCAGCTATGCAAAGAAGAAAAGGCCAGCTATaGAAAGAACACTGGTGTGGAATGTCAGCACAAGTA +
Preference number: 6 (lower is better)
Translates to: LRPAMQRRKGQL*KEHWCGMSAQV
Trigger: TACTTGTGCTGACATTCCACACCAGTGTTCTTTGCATAGCTGGCCTTTTCTTCTTTGCATAGCTGGCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CCA 72 bp AGGCTGGAAAGCAACACAAGAGAACTTTTGGGGTTATaGGAATGTTCCATCTTGACAGGAAGGGACTTGCAC +
Preference number: 6 (lower is better)
Translates to: RLESNTRELLGL*ECSILTGRDLH
Trigger: GTGCAAGTCCCTTCCTGTCAAGATGGAACATTCCCATAACCCCAAAAGTTCTCTTGTGTTGCTTTCCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CCA 72 bp AAAATCATACAAGTGGTTGCTTCTGGCGTGAGGGGATaGCATGGAAAGAGGCTGGAAAGCAACACAAGAGAA +
Preference number: 6 (lower is better)
Translates to: KIIQVVASGVRG*HGKRLESNTRE
Trigger: TTCTCTTGTGTTGCTTTCCAGCCTCTTTCCATGCCATCCCCTCACGCCAGAAGCAACCACTTGTATGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CCA 72 bp GGGAAGAGAGAGAAACATACATGGAGATTTGACTACTaGGCTTGTGCCAGCCCCCGTTTTGTCACAAGATTT +
Preference number: 6 (lower is better)
Translates to: GKREKHTWRFDY*ACASPRFVTRF
Trigger: AAATCTTGTGACAAAACGGGGGCTGGCACAAGCCCAGTAGTCAAATCTCCATGTATGTTTCTCTCTCTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CAA 72 bp GAGCGAACTAGTCTCAACTATTGCTCATGTCCAGAATaGAGGCAACGAAGGCAAGAGCAAGAAGAAACCCCA +
Preference number: 6 (lower is better)
Translates to: ERTSLNYCSCPE*RQRRQEQEETP
Trigger: TGGGGTTTCTTCTTGCTCTTGCCTTCGTTGCCTCAATTCTGGACATGAGCAATAGTTGAGACTAGTTCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CAA 72 bp TCTTCACAGGTACACTGCAGGACTCCATTCAGGCTGTaGCAGTCTGCACAAGAAATAGAACTCAGTCTCATG +
Preference number: 6 (lower is better)
Translates to: SSQVHCRTPFRL*QSAQEIELSLM
Trigger: CATGAGACTGAGTTCTATTTCTTGTGCAGACTGCAACAGCCTGAATGGAGTCCTGCAGTGTACCTGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493249.5
CDS CAA 90 bp ATCTGCCTGGAGCGAACTAGTCTCAACTATTGCTCATGTCCAGAATaGAGGCAACGAAGGCAAGAGCAAGAAGAAACCCCAGAATCTAAT +
Preference number: 6 (lower is better)
Translates to: ICLERTSLNYCSCPE*RQRRQEQEETPESN
Trigger: ATTAGATTCTGGGGTTTCTTCTTGCTCTTGCCTTCGTTGCCTCAATTCTGGACATGAGCAATAGTTGAGACTAGTTCGCTCCAGGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CAA 90 bp AGAATGCGTTGTAAGATGGGAAGAGAGAGAAACATACATGGAGATTaGACTACTGGGCTTGTGCCAGCCCCCGTTTTGTCACAAGATTTG +
Preference number: 6 (lower is better)
Translates to: RMRCKMGRERNIHGD*TTGLVPAPVLSQDL
Trigger: CAAATCTTGTGACAAAACGGGGGCTGGCACAAGCCCAGTAGTCAAATCTCCATGTATGTTTCTCTCTCTTCCCATCTTACAACGCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS TCA 72 bp CACTCTGAAACTCAAGACCAGGGCAAGTCTACACAGTaGAAATGCCTCACCTTGTTCAGTTCTTCAAGCAGA +
Preference number: 6 (lower is better)
Translates to: HSETQDQGKSTQ*KCLTLFSSSSR
Trigger: TCTGCTTGAAGAACTGAACAAGGTGAGGCATTTTCACTGTGTAGACTTGCCCTGGTCTTGAGTTTCAGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS GCA 72 bp TCCAGGATTGGGTCTCTGCAAGTGGAAGGACAGCATTaGTGTAATGGAAATAGGGAAGACAGTGGGAAAAAT +
Preference number: 6 (lower is better)
Translates to: SRIGSLQVEGQH*CNGNREDSGKN
Trigger: ATTTTTCCCACTGTCTTCCCTATTTCCATTACAGCAATGCTGTCCTTCCACTTGCAGAGACCCAATCCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS GCA 72 bp TCTGCCTTTTGCAGAACTGGTGCCCAATTCTGGGGATaGCCTTCTAAGACCATTGTGTTACTTACCGAAATT +
Preference number: 6 (lower is better)
Translates to: SAFCRTGAQFWG*PSKTIVLLTEI
Trigger: AATTTCGGTAAGTAACACAATGGTCTTAGAAGGGCATCCCCAGAATTGGGCACCAGTTCTGCAAAAGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491283.5
CDS CCA 72 bp ATGCTGATAATAGTTTCTGGAAGGGATCTCTGGAATTaGTCTGACCCAATTAACACACGGCCTCTGATGGGA +
Preference number: 6 (lower is better)
Translates to: MLIIVSGRDLWN*SDPINTRPLMG
Trigger: TCCCATCAGAGGCCGTGTGTTAATTGGGTCAGACCAATTCCAGAGATCCCTTCCAGAAACTATTATCAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS CCA 72 bp AATCTTATGTCGAGTTATAATTCCCAATGTTGGAGGTaGGGCTTGGTGGGAGATGATTGGATCATGGAGGTG +
Preference number: 6 (lower is better)
Translates to: NLMSSYNSQCWR*GLVGDDWIMEV
Trigger: CACCTCCATGATCCAATCATCTCCCACCAAGCCCCACCTCCAACATTGGGAATTATAACTCGACATAAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CAA 72 bp ACACCAGAACTCGAGGGAGCCCTTCCTTCAGTATACTaGTGGCTCAATCACTTCTTATGCTGTTTGGAAAGA +
Preference number: 6 (lower is better)
Translates to: TPELEGALPSVY*WLNHFLCCLER
Trigger: TCTTTCCAAACAGCATAAGAAGTGATTGAGCCACAAGTATACTGAAGGAAGGGCTCCCTCGAGTTCTGGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371243.2
ENST00000371253.7
ENST00000471487.5
ENST00000474800.1
CDS CAA 72 bp CATGGAAAGAGGCTGGAAAGCAACACAAGAGAACTTTaGGGGTTATGGGAATGTTCCATCTTGACAGGAAGG +
Preference number: 6 (lower is better)
Translates to: HGKRLESNTREL*GLWECSILTGR
Trigger: CCTTCCTGTCAAGATGGAACATTCCCATAACCCCAAAAGTTCTCTTGTGTTGCTTTCCAGCCTCTTTCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CAA 90 bp AACCGTGAGCTGGCATACTTTTCTTCCCGCAGTAAGACTGTCCAGTaGGTTACTGAGGCTGAATTAAGGATATTGTCAGCTATACTGATG +
Preference number: 6 (lower is better)
Translates to: NRELAYFSSRSKTVQ*VTEAELRILSAILM
Trigger: CATCAGTATAGCTGACAATATCCTTAATTCAGCCTCAGTAACCAACTGGACAGTCTTACTGCGGGAAGAAAAGTATGCCAGCTCACGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS CAA 90 bp CCAGTTAAGCCAACACACATCTTTCCTTTTGTAGGTATTGCTAGGTaGCGTGACAGCAATGGTAATGACAGATATAATGAGAGGGCACCC +
Preference number: 6 (lower is better)
Translates to: PVKPTHIFPFVGIAR*RDSNGNDRYNERAP
Trigger: GGGTGCCCTCTCATTATATCTGTCATTACCATTGCTGTCACGCAACCTAGCAATACCTACAAAAGGAAAGATGTGTGTTGGCTTAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS TCA 72 bp CCAACTTGGGCGACAAGAGTGACATTCGAAATTGGGTaGCCTGAACCGACTCAAAACCTTGAATTCTTTCAT +
Preference number: 6 (lower is better)
Translates to: PTWATRVTFEIG*PEPTQNLEFFH
Trigger: ATGAAAGAATTCAAGGTTTTGAGTCGGTTCAGGTCACCCAATTTCGAATGTCACTCTTGTCGCCCAAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371243.2
ENST00000419892.6
ENST00000477771.5
CDS GCA 72 bp AAACTAACCTGTGATGATAAAAATCATACAAGTGGTTaGTTCTGGCGTGAGGGGATGGCATGGAAAGAGGCT +
Preference number: 6 (lower is better)
Translates to: KLTCDDKNHTSG*FWREGMAWKEA
Trigger: AGCCTCTTTCCATGCCATCCCCTCACGCCAGAAGCAACCACTTGTATGATTTTTATCATCACAGGTTAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS GCA 72 bp ACCATGATTGTAAGTTTCCTGAGGCCTCCCCAGATATaGCTTTTGTACATCCTGCATAACTGTGAGTCAAAC +
Preference number: 6 (lower is better)
Translates to: TMIVSFLRPPQI*LLYILHNCESN
Trigger: GTTTGACTCACAGTTATGCAGGATGTACAAAAGGCATATCTGGGGAGGCCTCAGGAAACTTACAATCATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CAA 72 bp CTGGCATACTTTTCTTCCCGCAGTAAGACTGTCCAGTaGGTTACTGAGGCTGAATTAAGGATATTGTCAGCT +
Preference number: 6 (lower is better)
Translates to: LAYFSSRSKTVQ*VTEAELRILSA
Trigger: AGCTGACAATATCCTTAATTCAGCCTCAGTAACCAACTGGACAGTCTTACTGCGGGAAGAAAAGTATGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS CAA 72 bp GGGTTATGGGAATGTTCCATCTTGACAGGAAGGGACTaGCACAAGCGTTTTTCAAAGCTGATAGAGTCATAC +
Preference number: 6 (lower is better)
Translates to: GLWECSILTGRD*HKRFSKLIESY
Trigger: GTATGACTCTATCAGCTTTGAAAAACGCTTGTGCAAGTCCCTTCCTGTCAAGATGGAACATTCCCATAACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CAA 72 bp GCTGGAATAGAAGTTCTGCTCAATATGGAAATCTACTaGCTGAACAGTATCTGTGAACTGGTCTTGGGGTCC +
Preference number: 6 (lower is better)
Translates to: AGIEVLLNMEIY*LNSICELVLGS
Trigger: GGACCCCAAGACCAGTTCACAGATACTGTTCAGCAAGTAGATTTCCATATTGAGCAGAACTTCTATTCCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CAA 90 bp CGCAGTAAGACTGTCCAGTTGGTTACTGAGGCTGAATTAAGGATATaGTCAGCTATACTGATGACATCCTCCATTGTTGAATTGGACACC +
Preference number: 6 (lower is better)
Translates to: RSKTVQLVTEAELRI*SAILMTSSIVELDT
Trigger: GGTGTCCAATTCAACAATGGAGGATGTCATCAGTATAGCTGACAATATCCTTAATTCAGCCTCAGTAACCAACTGGACAGTCTTACTGCG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS CAA 90 bp AGGTCTCTGGCTGGAATAGAAGTTCTGCTCAATATGGAAATCTACTaGCTGAACAGTATCTGTGAACTGGTCTTGGGGTCCTTCTTTTCT +
Preference number: 6 (lower is better)
Translates to: RSLAGIEVLLNMEIY*LNSICELVLGSFFS
Trigger: AGAAAAGAAGGACCCCAAGACCAGTTCACAGATACTGTTCAGCAAGTAGATTTCCATATTGAGCAGAACTTCTATTCCAGCCAGAGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS TCA 72 bp AGACAATGTCATTACACTGGGCTTTTCCGAACACTCTaGAAGAGCCGTCTTCTAATGGAAACAGCTTGTGAA +
Preference number: 6 (lower is better)
Translates to: RQCHYTGLFRTL*KSRLLMETACE
Trigger: TTCACAAGCTGTTTCCATTAGAAGACGGCTCTTTCAGAGTGTTCGGAAAAGCCCAGTGTAATGACATTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
ENST00000471487.5
CDS TCA 72 bp CTGTTTGCTTCCAAGAACTTAAGGCAGACAACTTGTTaGACAGAAGTTGTCGCAGCTTACTGTCCAAGAGTA +
Preference number: 6 (lower is better)
Translates to: LFASKNLRQTTC*TEVVAAYCPRV
Trigger: TACTCTTGGACAGTAAGCTGCGACAACTTCTGTTCAACAAGTTGTCTGCCTTAAGTTCTTGGAAGCAAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS TCA 72 bp ACTGGTAGTAATCCTGTTATGTTCACCACGCTACACTaGGAATGCGTTGTAAGATGGGAAGAGAGAGAAACA +
Preference number: 6 (lower is better)
Translates to: TGSNPVMFTTLH*ECVVRWEERET
Trigger: TGTTTCTCTCTCTTCCCATCTTACAACGCATTCTCAGTGTAGCGTGGTGAACATAACAGGATTACTACCAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CCA 72 bp GTTTTCTACTGCAGCAGCAGAAGCAAGGTCTCTGGCTaGAATAGAAGTTCTGCTCAATATGGAAATCTACTT +
Preference number: 6 (lower is better)
Translates to: VFYCSSRSKVSG*NRSSAQYGNLL
Trigger: AAGTAGATTTCCATATTGAGCAGAACTTCTATTCCAGCCAGAGACCTTGCTTCTGCTGCTGCAGTAGAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CAA 72 bp TCTGTTTGCTTCCAAGAACTTAAGGCAGACAACTTGTaGAACAGAAGTTGTCGCAGCTTACTGTCCAAGAGT +
Preference number: 6 (lower is better)
Translates to: SVCFQELKADNL*NRSCRSLLSKS
Trigger: ACTCTTGGACAGTAAGCTGCGACAACTTCTGTTCAACAAGTTGTCTGCCTTAAGTTCTTGGAAGCAAACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS CAA 72 bp ATTGTAAGTTTCCTGAGGCCTCCCCAGATATGCCTTTaGTACATCCTGCATAACTGTGAGTCAAACCTCTTT +
Preference number: 6 (lower is better)
Translates to: IVSFLRPPQICL*YILHNCESNLF
Trigger: AAAGAGGTTTGACTCACAGTTATGCAGGATGTACAAAAGGCATATCTGGGGAGGCCTCAGGAAACTTACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CAA 72 bp GATGCCCTTCTAAGACCATTGTGTTACTTACCGAAATaGGGTGACCTGAACCGACTCAAAACCTTGAATTCT +
Preference number: 6 (lower is better)
Translates to: DALLRPLCYLPK*GDLNRLKTLNS
Trigger: AGAATTCAAGGTTTTGAGTCGGTTCAGGTCACCCAATTTCGGTAAGTAACACAATGGTCTTAGAAGGGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491283.5
CDS CAA 90 bp AATTCTGGGGATGCCCTTCTAAGACCATTGTGTTACTTACCGAAATaGGGTGACCTGAACCGACTCAAAACCTTGAATTCTTTCATATGC +
Preference number: 6 (lower is better)
Translates to: NSGDALLRPLCYLPK*GDLNRLKTLNSFIC
Trigger: GCATATGAAAGAATTCAAGGTTTTGAGTCGGTTCAGGTCACCCAATTTCGGTAAGTAACACAATGGTCTTAGAAGGGCATCCCCAGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491283.5
CDS TCA 72 bp AGATATATCCTTACTTGTACTAAGCCTGCTGGCTTATaGCTCACACCTTCACTCTTCTCTTTAATTCCCAGG +
Preference number: 6 (lower is better)
Translates to: RYILTCTKPAGL*LTPSLFSLIPR
Trigger: CCTGGGAATTAAAGAGAAGAGTGAAGGTGTGAGTCATAAGCCAGCAGGCTTAGTACAAGTAAGGATATATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419892.6
ENST00000471487.5
CDS CCA 72 bp AAGTTATACCTCAATAAAAGAAATTATAGCACAGGATaGCTCCAGGATTGGGTCTCTGCAAGTGGAAGGACA +
Preference number: 6 (lower is better)
Translates to: KLYLNKRNYSTG*LQDWVSASGRT
Trigger: TGTCCTTCCACTTGCAGAGACCCAATCCTGGAGCCATCCTGTGCTATAATTTCTTTTATTGAGGTATAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS CAA 72 bp TTTTCTGTTTGCTTCCAAGAACTTAAGGCAGACAACTaGTTGAACAGAAGTTGTCGCAGCTTACTGTCCAAG +
Preference number: 6 (lower is better)
Translates to: FSVCFQELKADN*LNRSCRSLLSK
Trigger: CTTGGACAGTAAGCTGCGACAACTTCTGTTCAACAAGTTGTCTGCCTTAAGTTCTTGGAAGCAAACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS CAA 90 bp GAGTTTTGCTTTTCTGTTTGCTTCCAAGAACTTAAGGCAGACAACTaGTTGAACAGAAGTTGTCGCAGCTTACTGTCCAAGAGTATTCCA +
Preference number: 6 (lower is better)
Translates to: EFCFSVCFQELKADN*LNRSCRSLLSKSIP
Trigger: TGGAATACTCTTGGACAGTAAGCTGCGACAACTTCTGTTCAACAAGTTGTCTGCCTTAAGTTCTTGGAAGCAAACAGAAAAGCAAAACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS TCA 72 bp CCTTGCCTTATTCATTTGAGACAAACTGAGTTAGCATaGTGTTGTCGGAGGAATCTCCAGTATGAGAAAATG +
Preference number: 6 (lower is better)
Translates to: PCLIHLRQTELA*CCRRNLQYEKM
Trigger: CATTTTCTCATACTGGAGATTCCTCCGACAACATCATGCTAACTCAGTTTGTCTCAAATGAATAAGGCAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
ENST00000477858.1
CDS TCA 72 bp TTAGACATTGCACTAGGTGCTTTACCAGGGATTCATTaGATTCTTTCAACATCCTTTGAGGGAGGTACCATT +
Preference number: 6 (lower is better)
Translates to: LDIALGALPGIH*ILSTSFEGGTI
Trigger: AATGGTACCTCCCTCAAAGGATGTTGAAAGAATTCAATGAATCCCTGGTAAAGCACCTAGTGCAATGTCTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419892.6
CDS TCA 72 bp CCTTCTAAGACCATTGTGTTACTTACCGAAATTGGGTaGCCTGAACCGACTCAAAACCTTGAATTCTTTCAT +
Preference number: 6 (lower is better)
Translates to: PSKTIVLLTEIG*PEPTQNLEFFH
Trigger: ATGAAAGAATTCAAGGTTTTGAGTCGGTTCAGGTCACCCAATTTCGGTAAGTAACACAATGGTCTTAGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491283.5
CDS CAA 72 bp CCAACACACATCTTTCCTTTTGTAGGTATTGCTAGGTaGCGTGACAGCAATGGTAATGACAGATATAATGAG +
Preference number: 6 (lower is better)
Translates to: PTHIFPFVGIAR*RDSNGNDRYNE
Trigger: CTCATTATATCTGTCATTACCATTGCTGTCACGCAACCTAGCAATACCTACAAAAGGAAAGATGTGTGTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000283297.5
ENST00000371253.7
ENST00000419892.6
ENST00000449332.6
CDS CAA 72 bp GTCAATAATAACTCCAAGGAATGGAAAAGCAAGTTTTaGTATATTCTTACCATGGAGTACTACTGGACTACA +
Preference number: 6 (lower is better)
Translates to: VNNNSKEWKSKF*YILTMEYYWTT
Trigger: TGTAGTCCAGTAGTACTCCATGGTAAGAATATACAAAAACTTGCTTTTCCATTCCTTGGAGTTATTATTGAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419892.6