Pregenerated sensors for ACTRT2 (Homo sapiens)
Ensembl gene IDs: ENSG00000169717Ensembl transcript IDs: ENST00000378404.4
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCGAGAGCCCGGGGCTCTaGCTGCCCAGCTGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RHWSFIEHPPKAGARVHPESPGL*LPSCWG Trigger: GCCCCAGCAGCTGGGCAGCCAGAGCCCCGGGCTCTC...GGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR GCA 90 bp | CGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCCGTGCCCGGGAGCCCTaGATCCTCAGCCGCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: RHWSFIEHPPKAGARVHPRAREP*ILSRRS Trigger: AGACCTGCGGCTGAGGATGCAGGGCTCCCGGGCACG...GGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CCA 90 bp | CGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCTGCTCTCCCTCCAGGTaGCCTGGGCCTGCTGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RHWSFIEHPPKAGARVHPCSPSR*PGPAEA Trigger: GGCCTCAGCAGGCCCAGGCCACCTGGAGGGAGAGCA...GGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CCA 90 bp | GGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCCTGGCTGCCCAGCTGCTaGGGCACGAACAGGGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: GIGPLLNILPKLGLGFTPWLPSC*GTNRAS Trigger: CGAGGCCCTGTTCGTGCCCCAGCAGCTGGGCAGCCA...GGGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR TCA 90 bp | GGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCCGCCCCACGATGGAGCTaGCCATGTGCCGGGGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: GIGPLLNILPKLGLGFTPAPRWS*PCAGVQ Trigger: TTGGACCCCGGCACATGGTCAGCTCCATCGTGGGGC...GGGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR GCA 90 bp | GGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCCCAGGGAGGGCTCCGTTaGAAGCAGGGGCTGGTCGCT | + |
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Preference number: 4 (lower is better) Translates to: GIGPLLNILPKLGLGFTPQGGLR*KQGLVA Trigger: AGCGACCAGCCCCTGCTTGCAACGGAGCCCTCCCTG...GGGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR GCA 90 bp | TTCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACGCAGGGCTAGCACCGTaGCCGGGAGCCCTGCATCCT | + |
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Preference number: 4 (lower is better) Translates to: FRHWSFIEHPPKAGARVHAGLAP*PGALHP Trigger: AGGATGCAGGGCTCCCGGGCACGGTGCTAGCCCTGC...GTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR GCA 90 bp | TTCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCTCTGGCTGCCCAGCTaGTGGGGCACGAACAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: FRHWSFIEHPPKAGARVHLWLPS*WGTNRA Trigger: GGCCCTGTTCGTGCCCCAGCAGCTGGGCAGCCAGAG...GTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR TCA 90 bp | CGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCCGTCATCCCACCCTGTaGTCAGGCCACGCTCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: RHWSFIEHPPKAGARVHPRHPTL*SGHARK Trigger: CTTTCGAGCGTGGCCTGATCACAGGGTGGGATGACG...GGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR TCA 90 bp | TTCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCACGTGGAGCTTGGTaGCTGCGTGGGGCAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: FRHWSFIEHPPKAGARVHPRGAW*LRGAGS Trigger: ACTCCCTGCCCCACGCAGTCACCAAGCTCCACGTGG...GTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR GCA 90 bp | TTCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCGCTCGAAAGGGGAGTaGAGCTGCAGGGCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FRHWSFIEHPPKAGARVHRSKGE*SCRASC Trigger: GCAGGAGGCCCTGCAGCTGCACTCCCCTTTCGAGCG...GTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CCA 90 bp | TTCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACGCAGGGGCTGGTCGCTaGGTTTCACGCCTAGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: FRHWSFIEHPPKAGARVHAGAGR*VSRLAP Trigger: GGGAGCTAGGCGTGAAACCCAGCGACCAGCCCCTGC...GTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CCA 90 bp | CGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCGTTGCAAGCAGGGGCTaGTCGCTGGGTTTCACGCCT | + |
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Preference number: 4 (lower is better) Translates to: RHWSFIEHPPKAGARVHPVASRG*SLGFTP Trigger: AGGCGTGAAACCCAGCGACCAGCCCCTGCTTGCAAC...GGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CCA 90 bp | TCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCAGACCCTTGTCCAGCTaGCAGGGGAAGGTGTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SGIGPLLNILPKLGLGFTRPLSS*QGKVWP Trigger: CGGCCACACCTTCCCCTGCCAGCTGGACAAGGGTCT...GGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CCA 90 bp | TCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCAGGCTCCAATCCAGGTaGAGAACCACCGGTCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: SGIGPLLNILPKLGLGFTRLQSR*RTTGRG Trigger: CCCCCGACCGGTGGTTCTCCACCTGGATTGGAGCCT...GGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR GCA 90 bp | CGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCCAGACAGGCCCGCTTTaGAGAACCCCGAGCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: RHWSFIEHPPKAGARVHPQTGPL*RTPSHC Trigger: ACAATGGCTCGGGGTTCTGCAAAGCGGGCCTGTCTG...GGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR TCA 90 bp | TCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCTCCAGGGCCGCTTTGTaGTGCAATAGGGGATCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SGIGPLLNILPKLGLGFTSRAAL*CNRGSH Trigger: GTGGGATCCCCTATTGCATCACAAAGCGGCCCTGGA...GGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR GCA 90 bp | TCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCATGGAGCTGACCATGTaGCGGGGTCCAAACTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SGIGPLLNILPKLGLGFTMELTM*RGPNSP Trigger: TGGGGAGTTTGGACCCCGGCACATGGTCAGCTCCAT...GGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR GCA 90 bp | TCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCGCCTGGAATTTCAGGTaGCCCACGATGGAGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: SGIGPLLNILPKLGLGFTAWNFR*PTMELT Trigger: GGTCAGCTCCATCGTGGGGCACCTGAAATTCCAGGC...GGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR GCA 90 bp | TCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCAAAGGGGAGTGCAGCTaGAGGGCCTCCTGCTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: SGIGPLLNILPKLGLGFTKGECS*RASCLY Trigger: GTACAAGCAGGAGGCCCTGCAGCTGCACTCCCCTTT...GGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR GCA 90 bp | TTCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCTGGCCAGGAGCAGCTaGATGAGGAGCTCCGTGATG | + |
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Preference number: 4 (lower is better) Translates to: FRHWSFIEHPPKAGARVHLARSS*MRSSVM Trigger: CATCACGGAGCTCCTCATGCAGCTGCTCCTGGCCAG...GTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR GCA 90 bp | TCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCTCCTTGGAGGCCAGCTaGTCCAGCTCCTTGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: SGIGPLLNILPKLGLGFTSLEAS*SSSLRS Trigger: GCTTCTCAAGGAGCTGGAGCAGCTGGCCTCCAAGGA...GGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR TCA 90 bp | TTCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCTGGTTGGCCTCTGCTaGGGGAGCCTGGAATTTCAG | + |
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Preference number: 4 (lower is better) Translates to: FRHWSFIEHPPKAGARVHLVGLC*GSLEFQ Trigger: CTGAAATTCCAGGCTCCCTCAGCAGAGGCCAACCAG...GTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR GCA 90 bp | GGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCCGGGGAGTCTAAAGCGTaGGGATTAAACATGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: GIGPLLNILPKLGLGFTPGESKA*GLNMPA Trigger: TGCGGGCATGTTTAATCCGCACGCTTTAGACTCCCC...GGGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CCA 90 bp | TTCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACTCTGCTGAGGGAGCCTaGAATTTCAGGTGCCCCACG | + |
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Preference number: 4 (lower is better) Translates to: FRHWSFIEHPPKAGARVHSAEGA*NFRCPT Trigger: CGTGGGGCACCTGAAATTCCAGGCTCCCTCAGCAGA...GTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR TCA 90 bp | TTCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACAGCTACTCAGAGAGGTaGCGATGGAGGCTCCAATCC | + |
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Preference number: 4 (lower is better) Translates to: FRHWSFIEHPPKAGARVHSYSER*RWRLQS Trigger: GGATTGGAGCCTCCATCGTCACCTCTCTGAGTAGCT...GTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CCA 90 bp | TCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCAGTACTTCTTCTGGTTaGCCTCTGCTGAGGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: SGIGPLLNILPKLGLGFTSTSSG*PLLREP Trigger: AGGCTCCCTCAGCAGAGGCCAACCAGAAGAAGTACT...GGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR TCA 90 bp | CGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCCGAAGTTCTCGAACATaGCTTCTGCCATCTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: RHWSFIEHPPKAGARVHPRSSRT*LLPSSH Trigger: GTGAGAAGATGGCAGAAGTCATGTTCGAGAACTTCG...GGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CCA 90 bp | CGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCACAAAGTACTTCTTCTaGTTGGCCTCTGCTGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: RHWSFIEHPPKAGARVHPTKYFF*LASAEG Trigger: TCCCTCAGCAGAGGCCAACCAGAAGAAGTACTTTGT...GGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR TCA 90 bp | TTCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACAGCACAGCTTCTTTTTaGTGTCGTCCACGAGACCCT | + |
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Preference number: 4 (lower is better) Translates to: FRHWSFIEHPPKAGARVHSTASF*CRPRDP Trigger: AGGGTCTCGTGGACGACATCAAAAAGAAGCTGTGCT...GTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR GCA 90 bp | TCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCTCGAACATGACTTCTaGCATCTTCTCACGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SGIGPLLNILPKLGLGFTLEHDF*HLLTVL Trigger: GAGAACCGTGAGAAGATGGCAGAAGTCATGTTCGAG...GGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CCA 90 bp | GGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCCCCAAAGAGGATCTTCTaGATGTCGGTATCACACTTG | + |
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Preference number: 4 (lower is better) Translates to: GIGPLLNILPKLGLGFTPPKRIF*MSVSHL Trigger: CAAGTGTGATACCGACATCCAGAAGATCCTCTTTGG...GGGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCC 51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR TCA 90 bp | TTCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACGCATTGGTCCTTTATTaGACATCCTCCCAAAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FRHWSFIEHPPKAGARVHALVLY*TSSQSW Trigger: CCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGC...GTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS CCA 90 bp | CTCTGGCTGCCCAGCTGCTGGGGCACGAACAGGGCCTCGGGCGCCTaGTGCAGCGGGTCCCCGAGGCTGATGATGTTCCCGTCGGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: LWLPSCWGTNRASGA*CSGSPRLMMFPSGS Trigger: GCTGCCCGACGGGAACATCATCAGCCTCGGGGACCCGCTGCACCAGGCGCCCGAGGCCCTGTTCGTGCCCCAGCAGCTGGGCAGCCAGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS GCA 90 bp | TGGCTGCCCAGCTGCTGGGGCACGAACAGGGCCTCGGGCGCCTGGTaGAGCGGGTCCCCGAGGCTGATGATGTTCCCGTCGGGCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: WLPSCWGTNRASGAW*SGSPRLMMFPSGSL Trigger: CAAGCTGCCCGACGGGAACATCATCAGCCTCGGGGACCCGCTGCACCAGGCGCCCGAGGCCCTGTTCGTGCCCCAGCAGCTGGGCAGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS GCA 90 bp | CTCTTCCCACAGCTCTCGGGGTGTCTCAAGGCAGGGCTAGCACCGTaGCCGGGAGCCCTGCATCCTCAGCCGCAGGTCTGCTCTCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LFPQLSGCLKAGLAP*PGALHPQPQVCSPS Trigger: GGAGGGAGAGCAGACCTGCGGCTGAGGATGCAGGGCTCCCGGGCACGGTGCTAGCCCTGCCTTGAGACACCCCGAGAGCTGTGGGAAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CAA 90 bp | CGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCCCCGCCACGTGGAGCTaGGTGACTGCGTGGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: RHWSFIEHPPKAGARVHPPATWS*VTAWGR Trigger: CCTGCCCCACGCAGTCACCAAGCTCCACGTGGCGGG...GGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCG 62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS TCA 90 bp | ACTCAAAGAGGTGCTTCCAGAGTCTCTCCACGTCATCCCACCCTGTaGTCAGGCCACGCTCGAAAGGGGAGTGCAGCTGCAGGGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: TQRGASRVSPRHPTL*SGHARKGSAAAGPP Trigger: AGGAGGCCCTGCAGCTGCACTCCCCTTTCGAGCGTGGCCTGATCACAGGGTGGGATGACGTGGAGAGACTCTGGAAGCACCTCTTTGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CAA 90 bp | TCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCTCAGGGAGGGCTCCGTaGCAAGCAGGGGCTGGTCGC | + |
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Preference number: 5 (lower is better) Translates to: SGIGPLLNILPKLGLGFTSGRAP*QAGAGR Trigger: GCGACCAGCCCCTGCTTGCAACGGAGCCCTCCCTGA...GGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS GCA 90 bp | TACTTCTTCTGGTTGGCCTCTGCTGAGGGAGCCTGGAATTTCAGGTaGCCCACGATGGAGCTGACCATGTGCCGGGGTCCAAACTCCCCA | + |
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Preference number: 5 (lower is better) Translates to: YFFWLASAEGAWNFR*PTMELTMCRGPNSP Trigger: TGGGGAGTTTGGACCCCGGCACATGGTCAGCTCCATCGTGGGGCACCTGAAATTCCAGGCTCCCTCAGCAGAGGCCAACCAGAAGAAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CAA 90 bp | GGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCCTTGATGGGGGTGTCCTaGGAGGCCAGCTGCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GIGPLLNILPKLGLGFTPLMGVS*EASCSS Trigger: GCTGGAGCAGCTGGCCTCCAAGGACACCCCCATCAA...GGGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CAA 90 bp | GGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCCCCGGGGGAGCCGTGATCTaGATGGGGGTGTCCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: GIGPLLNILPKLGLGFTPGGAVI*MGVSLE Trigger: CTCCAAGGACACCCCCATCAAGATCACGGCTCCCCC...GGGGGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CAA 90 bp | TCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCTTCCCGTCGGGCAGCTaGTACTCCCTCAGGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: SGIGPLLNILPKLGLGFTFPSGS*YSLRTS Trigger: GGAGGTCCTGAGGGAGTACAAGCTGCCCGACGGGAA...GGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CAA 90 bp | TCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCGAGGTCCCAAACTCCTaGAAGTCTGCGGCGGTGACC | + |
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Preference number: 5 (lower is better) Translates to: SGIGPLLNILPKLGLGFTEVPNS*KSAAVT Trigger: GGTCACCGCCGCAGACTTCAAGGAGTTTGGGACCTC...GGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CAA 90 bp | TTCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCAGAACCCCGAGCCATaGTCAAAAATCACAGCCGGG | + |
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Preference number: 5 (lower is better) Translates to: FRHWSFIEHPPKAGARVHQNPEP*SKITAG Trigger: CCCGGCTGTGATTTTTGACAATGGCTCGGGGTTCTG...GTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS-3UTR CAA 90 bp | TCCGGCATTGGTCCTTTATTGAACATCCTCCCAAAGCTGGGGCTAGGGTTCACCGGCATTGGTCCTTTATaGAACATCCTCCCAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SGIGPLLNILPKLGLGFTGIGPL*NILPKL Trigger: CAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCC...GGTGAACCCTAGCCCCAGCTTTGGGAGGATGTTCAATAAAGGACCAATGCCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS CCA 72 bp | CCCAGCTGCTGGGGCACGAACAGGGCCTCGGGCGCCTaGTGCAGCGGGTCCCCGAGGCTGATGATGTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: PSCWGTNRASGA*CSGSPRLMMFP Trigger: CGGGAACATCATCAGCCTCGGGGACCCGCTGCACCAGGCGCCCGAGGCCCTGTTCGTGCCCCAGCAGCTGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS GCA 72 bp | AGCTGCTGGGGCACGAACAGGGCCTCGGGCGCCTGGTaGAGCGGGTCCCCGAGGCTGATGATGTTCCCGTCG | + |
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Preference number: 6 (lower is better) Translates to: SCWGTNRASGAW*SGSPRLMMFPS Trigger: CGACGGGAACATCATCAGCCTCGGGGACCCGCTGCACCAGGCGCCCGAGGCCCTGTTCGTGCCCCAGCAGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS GCA 72 bp | ACCATATTCGAGAGCCCGGGGCTCTGGCTGCCCAGCTaGTGGGGCACGAACAGGGCCTCGGGCGCCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: TIFESPGLWLPS*WGTNRASGAWC Trigger: GCACCAGGCGCCCGAGGCCCTGTTCGTGCCCCAGCAGCTGGGCAGCCAGAGCCCCGGGCTCTCGAATATGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS CCA 72 bp | ATATTCGAGAGCCCGGGGCTCTGGCTGCCCAGCTGCTaGGGCACGAACAGGGCCTCGGGCGCCTGGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: IFESPGLWLPSC*GTNRASGAWCS Trigger: GCTGCACCAGGCGCCCGAGGCCCTGTTCGTGCCCCAGCAGCTGGGCAGCCAGAGCCCCGGGCTCTCGAATAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS GCA 72 bp | CAGCTCTCGGGGTGTCTCAAGGCAGGGCTAGCACCGTaGCCGGGAGCCCTGCATCCTCAGCCGCAGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: QLSGCLKAGLAP*PGALHPQPQVC Trigger: GCAGACCTGCGGCTGAGGATGCAGGGCTCCCGGGCACGGTGCTAGCCCTGCCTTGAGACACCCCGAGAGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS CCA 72 bp | CTGGGGTTCAGGGAGGGCTCCGTTGCAAGCAGGGGCTaGTCGCTGGGTTTCACGCCTAGCTCCCACTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LGFREGSVASRG*SLGFTPSSHSK Trigger: CTTTGAGTGGGAGCTAGGCGTGAAACCCAGCGACCAGCCCCTGCTTGCAACGGAGCCCTCCCTGAACCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS GCA 72 bp | TGGTTGGCCTCTGCTGAGGGAGCCTGGAATTTCAGGTaGCCCACGATGGAGCTGACCATGTGCCGGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: WLASAEGAWNFR*PTMELTMCRGP Trigger: TGGACCCCGGCACATGGTCAGCTCCATCGTGGGGCACCTGAAATTCCAGGCTCCCTCAGCAGAGGCCAACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS CCA 72 bp | TCAGGGAGGGCTCCGTTGCAAGCAGGGGCTGGTCGCTaGGTTTCACGCCTAGCTCCCACTCAAAGAGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: SGRAPLQAGAGR*VSRLAPTQRGA Trigger: AGCACCTCTTTGAGTGGGAGCTAGGCGTGAAACCCAGCGACCAGCCCCTGCTTGCAACGGAGCCCTCCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS TCA 72 bp | GGTGCTTCCAGAGTCTCTCCACGTCATCCCACCCTGTaGTCAGGCCACGCTCGAAAGGGGAGTGCAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GASRVSPRHPTL*SGHARKGSAAA Trigger: TGCAGCTGCACTCCCCTTTCGAGCGTGGCCTGATCACAGGGTGGGATGACGTGGAGAGACTCTGGAAGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS CCA 72 bp | AAGTACTTCTTCTGGTTGGCCTCTGCTGAGGGAGCCTaGAATTTCAGGTGCCCCACGATGGAGCTGACCATG | + |
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Preference number: 6 (lower is better) Translates to: KYFFWLASAEGA*NFRCPTMELTM Trigger: CATGGTCAGCTCCATCGTGGGGCACCTGAAATTCCAGGCTCCCTCAGCAGAGGCCAACCAGAAGAAGTACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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| CDS TCA 72 bp | CATCAAAATAAAGACCAGCCCTCCAGGGCCGCTTTGTaGTGCAATAGGGGATCCCACAGCTCTTCCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: HQNKDQPSRAAL*CNRGSHSSSHS Trigger: GCTGTGGGAAGAGCTGTGGGATCCCCTATTGCATCACAAAGCGGCCCTGGAGGGCTGGTCTTTATTTTGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378404.4 |
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