Pregenerated sensors for ACTB (Homo sapiens)
Ensembl gene IDs: ENSG00000075624Ensembl transcript IDs: ENST00000414620.1, ENST00000417101.2, ENST00000443528.5, ENST00000462494.5, ENST00000477812.2, ENST00000480301.1, ENST00000642480.2, ENST00000646584.1, ENST00000674681.1, ENST00000675515.1
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCAGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATaGCGCCCAGTCTCCAGTCACAAGGCAGAATCCAGACCTCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: CSMGHEQTGPSEATG*RPVSSHKAESRPQP Trigger: GGGCTGAGGTCTGGATTCTGCCTTGTGACTGGAGACTGGGCGCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR CCA 90 bp | GATGAACAGGTAGGAATTGCGGCCTCTCCTAAGCCTATGGGAGCCTaGGCCAGGCTGACCCTCAAGGCTGACAGCCACGATCCCATAGGT | + |
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Preference number: 1 (lower is better) Translates to: DEQVGIAASPKPMGA*ARLTLKADSHDPIG Trigger: ACCTATGGGATCGTGGCTGTCAGCCTTGAGGGTCAGCCTGGCCCAGGCTCCCATAGGCTTAGGAGAGGCCGCAATTCCTACCTGTTCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTGCAGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCGCCAACCAGCCCCAGTaGGGCATGGCACCTGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PSAAWVTNKLGPQRPRDGANQPQ*GMAPEP Trigger: TGGCTCAGGTGCCATGCCTCACTGGGGCTGGTTGGC...GCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCTGCAGAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR GCA 90 bp | CCCTCTGCAGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCGGGTTCACCCTCTGCTaGCCCCAACCCAGCCACACC | + |
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Preference number: 2 (lower is better) Translates to: PSAAWVTNKLGPQRPRDGGFTLC*PQPSHT Trigger: GGTGTGGCTGGGTTGGGGGCAGCAGAGGGTGAACCC...GCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCTGCAGAGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR CCA 90 bp | AGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCGCCCAGTCAGCCCCAGTGAGGCATaGCACCTGAGCCAGACACCC | + |
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Preference number: 2 (lower is better) Translates to: SMGHEQTGPSEATGWRPVSPSEA*HLSQTP Trigger: GGGTGTCTGGCTCAGGTGCCATGCCTCACTGGGGCT...GACTGGGCGCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTGCAGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCCCCCCTCTGTCTGGATaGACAGGTAGGAATTGCGGC | + |
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Preference number: 2 (lower is better) Translates to: PSAAWVTNKLGPQRPRDGPPLSG*TGRNCG Trigger: GCCGCAATTCCTACCTGTTCATCCAGACAGAGGGGG...GCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCTGCAGAGGG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR GCA 90 bp | GCTGACAGCCACGATCCCATAGGTGAAGGCAAAGGCGTGGCAGCTAGGAACACCGCAGGGTTCACCCTCTaGTGCCCCCAACCCAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: ADSHDPIGEGKGVAARNTAGFTL*CPQPSH Trigger: GTGGCTGGGTTGGGGGCAGCAGAGGGTGAACCCTGC...GGTGTTCCTAGCTGCCACGCCTTTGCCTTCACCTATGGGATCGTGGCTGTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR GCA 90 bp | CCCCCACCCTCTAAGGCTGCTCAATGTCAAGGCAGGAGGGATCTCCACACACCTCAGGGTTCACCCTCCTaGAGGGTTCACCCTCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PPPSKAAQCQGRRDLHTPQGSPS*RVHPLL Trigger: CAGCAGAGGGTGAACCCTGCAGGAGGGTGAACCCTG...AGGTGTGTGGAGATCCCTCCTGCCTTGACATTGAGCAGCCTTAGAGGGTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR GCA 90 bp | GCTGACAGCCACGATCCCATAGGTGAAGGCAAAGGCGTGGCAGCTAGGAACACCCCCACTCCCAGGAAATaGAGGTGCCAACCAGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: ADSHDPIGEGKGVAARNTPTPRK*RCQPAP Trigger: TGGGGCTGGTTGGCACCTGCATTTCCTGGGAGTGGG...GGTGTTCCTAGCTGCCACGCCTTTGCCTTCACCTATGGGATCGTGGCTGTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR GCA 90 bp | CACGATCCCATAGGTGAAGGCAAAGGCGTGGCAGCTAGGAACACCCACTACACCACTGCCCCACCCTTTTaGAGGGTTCACCCTCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: HDPIGEGKGVAARNTHYTTAPPF*RVHPPA Trigger: TGCAGGAGGGTGAACCCTGCAAAAGGGTGGGGCAGT...GGTGTAGTGGGTGTTCCTAGCTGCCACGCCTTTGCCTTCACCTATGGGATCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR CCA 90 bp | CCCTCTGCAGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCCAAGCATCTGCACTCTaGGTGAACCCAGAAAAACTG | + |
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Preference number: 2 (lower is better) Translates to: PSAAWVTNKLGPQRPRDGQASAL*VNPEKL Trigger: CAGTTTTTCTGGGTTCACCCAGAGTGCAGATGCTTG...GCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCTGCAGAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCCAGGCCAGGAACTCCCCAATAAGCAGGAACAGAGACCTGACCCCTGAGGGATCTCCACACACCTaGACTCTGGGTAAGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: KGQARNSPISRNRDLTPEGSPHT*TLGKDK Trigger: CTTGTCCTTACCCAGAGTGCAGGTGTGTGGAGATCC...CTCAGGGGTCAGGTCTCTGTTCCTGCTTATTGGGGAGTTCCTGGCCTGGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR TCA 90 bp | CACGATCCCATAGGTGAAGGCAAAGGCGTGGCAGCTAGGAACACCCACTACACCCATCTGCACTCTGGGTaGACCCAGAAAAACTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: HDPIGEGKGVAARNTHYTHLHSG*TQKNWG Trigger: ACCCCAGTTTTTCTGGGTTCACCCAGAGTGCAGATG...GGTGTAGTGGGTGTTCCTAGCTGCCACGCCTTTGCCTTCACCTATGGGATCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR CCA 72 bp | GGGTATCTCCCTCTGCAGCATGGGTCACGAACAAACTaGGCCCTCAGAGGCCACGGGATGGCGCCCAGTCTC | + |
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Preference number: 3 (lower is better) Translates to: GYLPLQHGSRTN*ALRGHGMAPSL Trigger: GAGACTGGGCGCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCTGCAGAGGGAGATACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR CAA 90 bp | GCTGACAGCCACGATCCCATAGGTGAAGGCAAAGGCGTGGCAGCTAGGAACACCCACTGCCCCACCCTTTaGCAGGGTTCACCCTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: ADSHDPIGEGKGVAARNTHCPTL*QGSPSC Trigger: GCAGGAGGGTGAACCCTGCAAAAGGGTGGGGCAGTG...GGTGTTCCTAGCTGCCACGCCTTTGCCTTCACCTATGGGATCGTGGCTGTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR CAA 90 bp | CACGATCCCATAGGTGAAGGCAAAGGCGTGGCAGCTAGGAACACCCACTACACCCTGGGTAAGGACAAGTaGGCCCCCACTGCCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: HDPIGEGKGVAARNTHYTLGKDK*APTAPP Trigger: GGGTGGGGCAGTGGGGGCCAACTTGTCCTTACCCAG...GGTGTAGTGGGTGTTCCTAGCTGCCACGCCTTTGCCTTCACCTATGGGATCGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR CAA 90 bp | AGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCGCCCAGTCACCCCCTACCCCAACTaGACTTTGATTCCAGGTCCC | + |
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Preference number: 3 (lower is better) Translates to: SMGHEQTGPSEATGWRPVTPYPN*TLIPGP Trigger: GGGACCTGGAATCAAAGTCAAGTTGGGGTAGGGGGT...GACTGGGCGCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR CCA 72 bp | GTAGGAATTGCGGCCTCTCCTAAGCCTATGGGAGCCTaGGCCAGGCTGACCCTCAAGGCTGACAGCCACGAT | + |
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Preference number: 3 (lower is better) Translates to: VGIAASPKPMGA*ARLTLKADSHD Trigger: ATCGTGGCTGTCAGCCTTGAGGGTCAGCCTGGCCCAGGCTCCCATAGGCTTAGGAGAGGCCGCAATTCCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR CCA 72 bp | CAGGAAATGCAGGTGCCAACCAGCCCCAGTGAGGCATaGCACCTGAGCCAGACACCCCCAAATAGTCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: QEMQVPTSPSEA*HLSQTPPNSPF Trigger: GAAGGGACTATTTGGGGGTGTCTGGCTCAGGTGCCATGCCTCACTGGGGCTGGTTGGCACCTGCATTTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR GCA 72 bp | TGCTCAATGTCAAGGCAGGAGGGATCTCCACACACCTaGACTCTGGGTAAGGACAAGTTGGCCCCCACTGCC | + |
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Preference number: 3 (lower is better) Translates to: CSMSRQEGSPHT*TLGKDKLAPTA Trigger: GGCAGTGGGGGCCAACTTGTCCTTACCCAGAGTGCAGGTGTGTGGAGATCCCTCCTGCCTTGACATTGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| 3UTR-3UTR CAA 90 bp | GCTGACAGCCACGATCCCATAGGTGAAGGCAAAGGCGTGGCAGCTAGGAACACCACCACAAAGTCACACTaGGCCTCATTTTTAAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: ADSHDPIGEGKGVAARNTTTKSH*ASFLRC Trigger: ACACCTTAAAAATGAGGCCAAGTGTGACTTTGTGGT...GGTGTTCCTAGCTGCCACGCCTTTGCCTTCACCTATGGGATCGTGGCTGTCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR GCA 90 bp | AGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCGCCCAGTCGCAGGGTTCACCCTCTaGTGCCCCCAACCCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SMGHEQTGPSEATGWRPVAGFTL*CPQPSH Trigger: GTGGCTGGGTTGGGGGCAGCAGAGGGTGAACCCTGC...GACTGGGCGCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR CCA 90 bp | CCCTCTGCAGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCAGCCCCAGTGAGGCATaGCACCTGAGCCAGACACCC | + |
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Preference number: 4 (lower is better) Translates to: PSAAWVTNKLGPQRPRDGSPSEA*HLSQTP Trigger: GGGTGTCTGGCTCAGGTGCCATGCCTCACTGGGGCT...GCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCTGCAGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR GCA 90 bp | AGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCGCCCAGTCCAAGTTGGCCCCCACTaGCCCACCCTTTTGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: SMGHEQTGPSEATGWRPVQVGPH*PTLLQG Trigger: ACCCTGCAAAAGGGTGGGGCAGTGGGGGCCAACTTG...GACTGGGCGCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR TCA 90 bp | AGGAGGGATCTCCACACACCTGCACTCTGGGTAAGGACAAGTTGGCCCCCACTGGCCAACCAGCCCCAGTaGGGCATGGCACCTGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: RRDLHTPALWVRTSWPPLANQPQ*GMAPEP Trigger: TGGCTCAGGTGCCATGCCTCACTGGGGCTGGTTGGC...CAGTGGGGGCCAACTTGTCCTTACCCAGAGTGCAGGTGTGTGGAGATCCCTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR TCA 90 bp | AGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCGCCCAGTCCCCCCTCTGTCTGGATaGACAGGTAGGAATTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SMGHEQTGPSEATGWRPVPPLSG*TGRNCG Trigger: GCCGCAATTCCTACCTGTTCATCCAGACAGAGGGGG...GACTGGGCGCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCT 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR GCA 90 bp | AGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCGCCCAGTCCTCAAGGGAACACCGTaGCCAGCTACCCTGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: SMGHEQTGPSEATGWRPVLKGTP*PATLRQ Trigger: CTGTCTCAGGGTAGCTGGGCACGGTGTTCCCTTGAG...GACTGGGCGCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR CCA 90 bp | AGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCGCCCAGTCGTGAAGGCAAAGGCGTaGCAGCTAGGAACACCCACT | + |
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Preference number: 4 (lower is better) Translates to: SMGHEQTGPSEATGWRPVVKAKA*QLGTPT Trigger: AGTGGGTGTTCCTAGCTGCCACGCCTTTGCCTTCAC...GACTGGGCGCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR CCA 90 bp | AAGGGCCAGGCCAGGAACTCCCCAATAAGCAGGAACAGAGACCTGACCCCTGAGGGGTCACGAACAAACTaGGCCCTCAGAGGCCACGGG | + |
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Preference number: 4 (lower is better) Translates to: KGQARNSPISRNRDLTPEGSRTN*ALRGHG Trigger: CCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCC...CTCAGGGGTCAGGTCTCTGTTCCTGCTTATTGGGGAGTTCCTGGCCTGGCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR TCA 90 bp | CCCCCACCCTCTAAGGCTGCTCAATGTCAAGGCAGGAGGGATCTCCACACACCTCCACGATCCCATAGGTaGAGGCAAAGGCGTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PPPSKAAQCQGRRDLHTPPRSHR*RQRRGS Trigger: GCTGCCACGCCTTTGCCTTCACCTATGGGATCGTGG...AGGTGTGTGGAGATCCCTCCTGCCTTGACATTGAGCAGCCTTAGAGGGTGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR TCA 90 bp | GCTGACAGCCACGATCCCATAGGTGAAGGCAAAGGCGTGGCAGCTAGGAACACCGCTGACCCTCAAGGCTaGCAGCCACGATCCCATAGG | + |
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Preference number: 4 (lower is better) Translates to: ADSHDPIGEGKGVAARNTADPQG*QPRSHR Trigger: CCTATGGGATCGTGGCTGTCAGCCTTGAGGGTCAGC...GGTGTTCCTAGCTGCCACGCCTTTGCCTTCACCTATGGGATCGTGGCTGTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR GCA 90 bp | GCTGACAGCCACGATCCCATAGGTGAAGGCAAAGGCGTGGCAGCTAGGAACACCTCATCCATGGTGAGCTaGGAGAATAGCCGGGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: ADSHDPIGEGKGVAARNTSSMVS*ENSRAR Trigger: CCGCGCCCGGCTATTCTCGCAGCTCACCATGGATGA...GGTGTTCCTAGCTGCCACGCCTTTGCCTTCACCTATGGGATCGTGGCTGTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR CCA 90 bp | CACGATCCCATAGGTGAAGGCAAAGGCGTGGCAGCTAGGAACACCCACTACACCTCAGAGGCCACGGGATaGCGCCCAGTCTCCAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: HDPIGEGKGVAARNTHYTSEATG*RPVSSH Trigger: GTGACTGGAGACTGGGCGCCATCCCGTGGCCTCTGA...GGTGTAGTGGGTGTTCCTAGCTGCCACGCCTTTGCCTTCACCTATGGGATCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR GCA 90 bp | AGGAGGGATCTCCACACACCTGCACTCTGGGTAAGGACAAGTTGGCCCCCACTGACTGCCCCACCCTTTTaGAGGGTTCACCCTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RRDLHTPALWVRTSWPPLTAPPF*RVHPPA Trigger: TGCAGGAGGGTGAACCCTGCAAAAGGGTGGGGCAGT...CAGTGGGGGCCAACTTGTCCTTACCCAGAGTGCAGGTGTGTGGAGATCCCTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR GCA 90 bp | CACGATCCCATAGGTGAAGGCAAAGGCGTGGCAGCTAGGAACACCCACTACACCCCCACTCCCAGGAAATaGAGGTGCCAACCAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: HDPIGEGKGVAARNTHYTPTPRK*RCQPAP Trigger: TGGGGCTGGTTGGCACCTGCATTTCCTGGGAGTGGG...GGTGTAGTGGGTGTTCCTAGCTGCCACGCCTTTGCCTTCACCTATGGGATCGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR CCA 90 bp | CACGATCCCATAGGTGAAGGCAAAGGCGTGGCAGCTAGGAACACCCACTACACCAAGCCTATGGGAGCCTaGGCCAGGCTGACCCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: HDPIGEGKGVAARNTHYTKPMGA*ARLTLK Trigger: CTTGAGGGTCAGCCTGGCCCAGGCTCCCATAGGCTT...GGTGTAGTGGGTGTTCCTAGCTGCCACGCCTTTGCCTTCACCTATGGGATCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR CCA 90 bp | GCTGACAGCCACGATCCCATAGGTGAAGGCAAAGGCGTGGCAGCTAGGAACACCCACACACCTGCACTCTaGGTAAGGACAAGTTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: ADSHDPIGEGKGVAARNTHTPAL*VRTSWP Trigger: GGGCCAACTTGTCCTTACCCAGAGTGCAGGTGTGTG...GGTGTTCCTAGCTGCCACGCCTTTGCCTTCACCTATGGGATCGTGGCTGTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR TCA 90 bp | CCCCCACCCTCTAAGGCTGCTCAATGTCAAGGCAGGAGGGATCTCCACACACCTTATCATCATCCATGGTaGGCTGCGAGAATAGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: PPPSKAAQCQGRRDLHTPYHHPW*AARIAG Trigger: CCCGGCTATTCTCGCAGCTCACCATGGATGATGATA...AGGTGTGTGGAGATCCCTCCTGCCTTGACATTGAGCAGCCTTAGAGGGTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR TCA 90 bp | AAGGGCCAGGCCAGGAACTCCCCAATAAGCAGGAACAGAGACCTGACCCCTGAGCATCTGCACTCTGGGTaGACCCAGAAAAACTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: KGQARNSPISRNRDLTPEHLHSG*TQKNWG Trigger: ACCCCAGTTTTTCTGGGTTCACCCAGAGTGCAGATG...CTCAGGGGTCAGGTCTCTGTTCCTGCTTATTGGGGAGTTCCTGGCCTGGCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR GCA 90 bp | CCAAATAGTCCCTTCCCACCTCCTCAAGCATCTGCACTCTGGGTGAACCCAGAACAGGGTTCACCCTCCTaGAGGGTTCACCCTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: PNSPFPPPQASALWVNPEQGSPS*RVHPLL Trigger: CAGCAGAGGGTGAACCCTGCAGGAGGGTGAACCCTG...TTCTGGGTTCACCCAGAGTGCAGATGCTTGAGGAGGTGGGAAGGGACTATTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR GCA 90 bp | CCCCCACCCTCTAAGGCTGCTCAATGTCAAGGCAGGAGGGATCTCCACACACCTGGATCTCCACACACCTaGACTCTGGGTAAGGACAAG | + |
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Preference number: 4 (lower is better) Translates to: PPPSKAAQCQGRRDLHTPGSPHT*TLGKDK Trigger: CTTGTCCTTACCCAGAGTGCAGGTGTGTGGAGATCC...AGGTGTGTGGAGATCCCTCCTGCCTTGACATTGAGCAGCCTTAGAGGGTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR GCA 90 bp | AGGAGGGATCTCCACACACCTGCACTCTGGGTAAGGACAAGTTGGCCCCCACTGCTGGGTATCTCCCTCTaGAGCATGGGTCACGAACAA | + |
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Preference number: 4 (lower is better) Translates to: RRDLHTPALWVRTSWPPLLGISL*SMGHEQ Trigger: TTGTTCGTGACCCATGCTGCAGAGGGAGATACCCAG...CAGTGGGGGCCAACTTGTCCTTACCCAGAGTGCAGGTGTGTGGAGATCCCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR CCA 90 bp | CCCCCACCCTCTAAGGCTGCTCAATGTCAAGGCAGGAGGGATCTCCACACACCTAAAAACTGGGGTACCTaGGGAGACATAGAAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PPPSKAAQCQGRRDLHTPKNWGT*GDIEGP Trigger: TGGCCCTTCTATGTCTCCCCAGGTACCCCAGTTTTT...AGGTGTGTGGAGATCCCTCCTGCCTTGACATTGAGCAGCCTTAGAGGGTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR GCA 90 bp | CCAAATAGTCCCTTCCCACCTCCTCAAGCATCTGCACTCTGGGTGAACCCAGAACTAACCAGAGCTGTCTaGAGGCCAGATATGGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PNSPFPPPQASALWVNPELTRAV*RPDMAP Trigger: TGGGGCCATATCTGGCCTGCAGACAGCTCTGGTTAG...TTCTGGGTTCACCCAGAGTGCAGATGCTTGAGGAGGTGGGAAGGGACTATTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS-3UTR CCA 90 bp | CCAAATAGTCCCTTCCCACCTCCTCAAGCATCTGCACTCTGGGTGAACCCAGAATCTCCCTCTGCAGCATaGGTCACGAACAAACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: PNSPFPPPQASALWVNPESPSAA*VTNKLG Trigger: GCCCAGTTTGTTCGTGACCCATGCTGCAGAGGGAGA...TTCTGGGTTCACCCAGAGTGCAGATGCTTGAGGAGGTGGGAAGGGACTATTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS CCA 90 bp | AGGCGACCGCCAGGTGGCGCAACCGACGCGCCTGCCGCGCCAAGCTaGGTGGGGCTGGACTCGTCCGGTGATGGGGCCCTTTGGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: RRPPGGATDAPAAPS*VGLDSSGDGALWAA Trigger: GGCTGCCCAAAGGGCCCCATCACCGGACGAGTCCAGCCCCACCCAGCTTGGCGCGGCAGGCGCGTCGGTTGCGCCACCTGGCGGTCGCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675515.1 |
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| CDS CCA 90 bp | GACCGCCAGGTGGCGCAACCGACGCGCCTGCCGCGCCAAGCTGGGTaGGGCTGGACTCGTCCGGTGATGGGGCCCTTTGGGCAGCCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: DRQVAQPTRLPRQAG*GWTRPVMGPFGQPD Trigger: GTCTGGCTGCCCAAAGGGCCCCATCACCGGACGAGTCCAGCCCCACCCAGCTTGGCGCGGCAGGCGCGTCGGTTGCGCCACCTGGCGGTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675515.1 |
||
| CDS TCA 90 bp | GAGCCGCCTGCGGATCAGGCTCGCAGACGCTCGCTCGCTCTTCCCTaGCGCAGCCTCAGCGGGAGCAGGGGCCTTCGCAGTGAGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EPPADQARRRSLALP*RSLSGSRGLRSEGG Trigger: CCCACCCTCACTGCGAAGGCCCCTGCTCCCGCTGAGGCTGCGTCAGGGAAGAGCGAGCGAGCGTCTGCGAGCCTGATCCGCAGGCGGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646584.1 |
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| CDS CCA 90 bp | GGTGAGCTGGTTGGTTGGGTTGTGGGGTTCCAGGCGACCGCCAGGTaGCGCAACCGACGCGCCTGCCGCGCCAAGCTGGGTGGGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GELVGWVVGFQATAR*RNRRACRAKLGGAG Trigger: TCCAGCCCCACCCAGCTTGGCGCGGCAGGCGCGTCGGTTGCGCCACCTGGCGGTCGCCTGGAACCCCACAACCCAACCAACCAGCTCACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675515.1 |
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| CDS CCA 90 bp | CAGGTGGCGCAACCGACGCGCCTGCCGCGCCAAGCTGGGTGGGGCTaGACTCGTCCGGTGATGGGGCCCTTTGGGCAGCCAGACACATTT | + |
|
Preference number: 5 (lower is better) Translates to: QVAQPTRLPRQAGWG*TRPVMGPFGQPDTF Trigger: AAATGTGTCTGGCTGCCCAAAGGGCCCCATCACCGGACGAGTCCAGCCCCACCCAGCTTGGCGCGGCAGGCGCGTCGGTTGCGCCACCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675515.1 |
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| CDS TCA 90 bp | CCCATGCCCACCATCACGCCCTGGGAAGGAAAGGACAAGAAGCCCTaGGCACGGGCGCAGCCCCCACCCCGGAAACCGGGAGGCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PMPTITPWEGKDKKP*ARAQPPPRKPGGSC Trigger: ACAGGAGCCTCCCGGTTTCCGGGGTGGGGGCTGCGCCCGTGCTCAGGGCTTCTTGTCCTTTCCTTCCCAGGGCGTGATGGTGGGCATGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000477812.2 ENST00000480301.1 |
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| CDS GCA 90 bp | GGGCGACAGAGGGAGACTCCATCTGGACACCGTTGCCAATCTAAGTaGCAATCCGAGCCGCCTGCGGATCAGGCTCGCAGACGCTCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GRQRETPSGHRCQSK*QSEPPADQARRRSL Trigger: GAGCGAGCGTCTGCGAGCCTGATCCGCAGGCGGCTCGGATTGGCACTTAGATTGGCAACGGTGTCCAGATGGAGTCTCCCTCTGTCGCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646584.1 |
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| CDS-3UTR CAA 90 bp | CCCCCACCCTCTAAGGCTGCTCAATGTCAAGGCAGGAGGGATCTCCACACACCTCTGGGTAAGGACAAGTaGGCCCCCACTGCCCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: PPPSKAAQCQGRRDLHTPLGKDK*APTAPP Trigger: GGGTGGGGCAGTGGGGGCCAACTTGTCCTTACCCAG...AGGTGTGTGGAGATCCCTCCTGCCTTGACATTGAGCAGCCTTAGAGGGTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS TCA 90 bp | GGGAAGGAGGTATCAGGCATGCAACACAAGTTACTGCAAAGACCCTaGCGTGGGAGCCCGATTGGCCCAGGGTGTGGCCGGGGGAGACGA | + |
|
Preference number: 5 (lower is better) Translates to: GKEVSGMQHKLLQRP*RGSPIGPGCGRGRR Trigger: TCGTCTCCCCCGGCCACACCCTGGGCCAATCGGGCTCCCACGTCAGGGTCTTTGCAGTAACTTGTGTTGCATGCCTGATACCTCCTTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646584.1 |
||
| CDS GCA 90 bp | GCAGGGGCCTTCGCAGTGAGGGTGGGAGGATGTACAGGCTACAGGTaGCCCGGCGGGAAGGAGGTATCAGGCATGCAACACAAGTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: AGAFAVRVGGCTGYR*PGGKEVSGMQHKLL Trigger: CAGTAACTTGTGTTGCATGCCTGATACCTCCTTCCCGCCGGGGCACCTGTAGCCTGTACATCCTCCCACCCTCACTGCGAAGGCCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646584.1 |
||
| CDS CCA 90 bp | GGAGGTATCAGGCATGCAACACAAGTTACTGCAAAGACCCTGACGTaGGAGCCCGATTGGCCCAGGGTGTGGCCGGGGGAGACGATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGIRHATQVTAKTLT*EPDWPRVWPGETIG Trigger: CCCTATCGTCTCCCCCGGCCACACCCTGGGCCAATCGGGCTCCCACGTCAGGGTCTTTGCAGTAACTTGTGTTGCATGCCTGATACCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646584.1 |
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| CDS-3UTR CAA 90 bp | AGGAGGGATCTCCACACACCTGCACTCTGGGTAAGGACAAGTTGGCCCCCACTGCACTGCCCCACCCTTTaGCAGGGTTCACCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RRDLHTPALWVRTSWPPLHCPTL*QGSPSC Trigger: GCAGGAGGGTGAACCCTGCAAAAGGGTGGGGCAGTG...CAGTGGGGGCCAACTTGTCCTTACCCAGAGTGCAGGTGTGTGGAGATCCCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674681.1 |
||
| CDS-3UTR CAA 90 bp | CCCTCTGCAGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCACCCCCTACCCCAACTaGACTTTGATTCCAGGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSAAWVTNKLGPQRPRDGTPYPN*TLIPGP Trigger: GGGACCTGGAATCAAAGTCAAGTTGGGGTAGGGGGT...GCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCTGCAGAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674681.1 |
||
| CDS CCA 90 bp | CTGGACAACATGTTGAAACTCCATCTCTATGCAAAGACCCTGACGTaGGAGCCCGATTGGCCCAGGGTGTGGCCGGGGGAGACGATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LDNMLKLHLYAKTLT*EPDWPRVWPGETIG Trigger: CCCTATCGTCTCCCCCGGCCACACCCTGGGCCAATCGGGCTCCCACGTCAGGGTCTTTGCATAGAGATGGAGTTTCAACATGTTGTCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414620.1 |
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| CDS GCA 90 bp | GATGTACAGGCTACAGGTGCCCCGGCGGGAAGGAGGTATCAGGCATaGAACACAAGTTACTGCAAAGACCCTGACGTGGGAGCCCGATTG | + |
|
Preference number: 5 (lower is better) Translates to: DVQATGAPAGRRYQA*NTSYCKDPDVGARL Trigger: CAATCGGGCTCCCACGTCAGGGTCTTTGCAGTAACTTGTGTTGCATGCCTGATACCTCCTTCCCGCCGGGGCACCTGTAGCCTGTACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646584.1 |
||
| CDS-3UTR CAA 90 bp | CCCTCTGCAGCATGGGTCACGAACAAACTGGGCCCTCAGAGGCCACGGGATGGCACCACAAAGTCACACTaGGCCTCATTTTTAAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSAAWVTNKLGPQRPRDGTTKSH*ASFLRC Trigger: ACACCTTAAAAATGAGGCCAAGTGTGACTTTGTGGT...GCCATCCCGTGGCCTCTGAGGGCCCAGTTTGTTCGTGACCCATGCTGCAGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000674681.1 |
||
| CDS GCA 90 bp | AAGTGTGCTGGGGTCTTGGGATGGGGAGTCTGTTCAGACCTACTGTaGACCTACTTAATACACACTCCAAGGCCGCTTTACACCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KCAGVLGWGVCSDLL*TYLIHTPRPLYTSL Trigger: GAGGCTGGTGTAAAGCGGCCTTGGAGTGTGTATTAAGTAGGTGCACAGTAGGTCTGAACAGACTCCCCATCCCAAGACCCCAGCACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000462494.5 ENST00000477812.2 |
||
| CDS-3UTR CAA 90 bp | CCAAATAGTCCCTTCCCACCTCCTCAAGCATCTGCACTCTGGGTGAACCCAGAATACCCCAACTTGACTTaGATTCCAGGTCCCCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PNSPFPPPQASALWVNPEYPNLT*IPGPPL Trigger: CAGAGGGGGACCTGGAATCAAAGTCAAGTTGGGGTA...TTCTGGGTTCACCCAGAGTGCAGATGCTTGAGGAGGTGGGAAGGGACTATTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674681.1 |
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| CDS GCA 90 bp | GGGACGCTGCCTAGTGAATTGAATGACTCGTATTGTTCCCAAGGTTaGAGCTGTGGCCTCCGAAGTGACTCAGCAGAATTCCTGGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GTLPSELNDSYCSQG*SCGLRSDSAEFLGV Trigger: AACTCCCAGGAATTCTGCTGAGTCACTTCGGAGGCCACAGCTGCAACCTTGGGAACAATACGAGTCATTCAATTCACTAGGCAGCGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443528.5 |
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| CDS CCA 90 bp | GCAGAAAGTGCAAAGAACACGGCTAAGTGTGCTGGGGTCTTGGGATaGGGAGTCTGTTCAGACCTACTGTGCACCTACTTAATACACACT | + |
|
Preference number: 5 (lower is better) Translates to: AESAKNTAKCAGVLG*GVCSDLLCTYLIHT Trigger: AGTGTGTATTAAGTAGGTGCACAGTAGGTCTGAACAGACTCCCCATCCCAAGACCCCAGCACACTTAGCCGTGTTCTTTGCACTTTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462494.5 ENST00000477812.2 |
||
| CDS GCA 72 bp | TTCCAGGCGACCGCCAGGTGGCGCAACCGACGCGCCTaGCGCGCCAAGCTGGGTGGGGCTGGACTCGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: FQATARWRNRRA*RAKLGGAGLVR Trigger: CCGGACGAGTCCAGCCCCACCCAGCTTGGCGCGGCAGGCGCGTCGGTTGCGCCACCTGGCGGTCGCCTGGAA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675515.1 |
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| CDS CCA 72 bp | GTGGCGCAACCGACGCGCCTGCCGCGCCAAGCTGGGTaGGGCTGGACTCGTCCGGTGATGGGGCCCTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VAQPTRLPRQAG*GWTRPVMGPFG Trigger: CCCAAAGGGCCCCATCACCGGACGAGTCCAGCCCCACCCAGCTTGGCGCGGCAGGCGCGTCGGTTGCGCCAC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675515.1 |
||
| CDS CCA 72 bp | CCAGGTGGCGCAACCGACGCGCCTGCCGCGCCAAGCTaGGTGGGGCTGGACTCGTCCGGTGATGGGGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PGGATDAPAAPS*VGLDSSGDGAL Trigger: AAGGGCCCCATCACCGGACGAGTCCAGCCCCACCCAGCTTGGCGCGGCAGGCGCGTCGGTTGCGCCACCTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675515.1 |
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| CDS CCA 72 bp | CAACCGACGCGCCTGCCGCGCCAAGCTGGGTGGGGCTaGACTCGTCCGGTGATGGGGCCCTTTGGGCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QPTRLPRQAGWG*TRPVMGPFGQP Trigger: TGGCTGCCCAAAGGGCCCCATCACCGGACGAGTCCAGCCCCACCCAGCTTGGCGCGGCAGGCGCGTCGGTTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675515.1 |
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| CDS CCA 72 bp | GTTGGTTGGGTTGTGGGGTTCCAGGCGACCGCCAGGTaGCGCAACCGACGCGCCTGCCGCGCCAAGCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VGWVVGFQATAR*RNRRACRAKLG Trigger: ACCCAGCTTGGCGCGGCAGGCGCGTCGGTTGCGCCACCTGGCGGTCGCCTGGAACCCCACAACCCAACCAAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000675515.1 |
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| CDS TCA 72 bp | GCGGATCAGGCTCGCAGACGCTCGCTCGCTCTTCCCTaGCGCAGCCTCAGCGGGAGCAGGGGCCTTCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ADQARRRSLALP*RSLSGSRGLRS Trigger: ACTGCGAAGGCCCCTGCTCCCGCTGAGGCTGCGTCAGGGAAGAGCGAGCGAGCGTCTGCGAGCCTGATCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646584.1 |
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| CDS CCA 72 bp | CGGGCCGGCCGCGTTATTACCATAAAAGGCAAACACTaGTCGGAGGCGTCCCCGCGGCGCGCGGCAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAGRVITIKGKH*SEASPRRAAGS Trigger: GCTTCCTGCCGCGCGCCGCGGGGACGCCTCCGACCAGTGTTTGCCTTTTATGGTAATAACGCGGCCGGCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642480.2 |
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| CDS CCA 72 bp | ATGGTGAGTGCAAAGACCCTGACGTGGGAGCCCGATTaGCCCAGGGTGTGGCCGGGGGAGACGATAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MVSAKTLTWEPD*PRVWPGETIGV Trigger: CACCCCTATCGTCTCCCCCGGCCACACCCTGGGCCAATCGGGCTCCCACGTCAGGGTCTTTGCACTCACCAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443528.5 |
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| CDS CAA 72 bp | CATGGTGAGTGCAAAGACCCTGACGTGGGAGCCCGATaGGCCCAGGGTGTGGCCGGGGGAGACGATAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: HGECKDPDVGAR*AQGVAGGDDRG Trigger: ACCCCTATCGTCTCCCCCGGCCACACCCTGGGCCAATCGGGCTCCCACGTCAGGGTCTTTGCACTCACCATG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443528.5 |
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| CDS CCA 72 bp | CATCTCTATGCAAAGACCCTGACGTGGGAGCCCGATTaGCCCAGGGTGTGGCCGGGGGAGACGATAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HLYAKTLTWEPD*PRVWPGETIGV Trigger: CACCCCTATCGTCTCCCCCGGCCACACCCTGGGCCAATCGGGCTCCCACGTCAGGGTCTTTGCATAGAGATG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000414620.1 |
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| CDS CCA 72 bp | CAAGTTACTGCAAAGACCCTGACGTGGGAGCCCGATTaGCCCAGGGTGTGGCCGGGGGAGACGATAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QVTAKTLTWEPD*PRVWPGETIGV Trigger: CACCCCTATCGTCTCCCCCGGCCACACCCTGGGCCAATCGGGCTCCCACGTCAGGGTCTTTGCAGTAACTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646584.1 |
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| CDS CAA 72 bp | CCATCTCTATGCAAAGACCCTGACGTGGGAGCCCGATaGGCCCAGGGTGTGGCCGGGGGAGACGATAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PSLCKDPDVGAR*AQGVAGGDDRG Trigger: ACCCCTATCGTCTCCCCCGGCCACACCCTGGGCCAATCGGGCTCCCACGTCAGGGTCTTTGCATAGAGATGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000414620.1 |
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| CDS CCA 72 bp | AGGCATGCAACACAAGTTACTGCAAAGACCCTGACGTaGGAGCCCGATTGGCCCAGGGTGTGGCCGGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RHATQVTAKTLT*EPDWPRVWPGE Trigger: CTCCCCCGGCCACACCCTGGGCCAATCGGGCTCCCACGTCAGGGTCTTTGCAGTAACTTGTGTTGCATGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000646584.1 |
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| CDS CAA 72 bp | ACAAGTTACTGCAAAGACCCTGACGTGGGAGCCCGATaGGCCCAGGGTGTGGCCGGGGGAGACGATAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TSYCKDPDVGAR*AQGVAGGDDRG Trigger: ACCCCTATCGTCTCCCCCGGCCACACCCTGGGCCAATCGGGCTCCCACGTCAGGGTCTTTGCAGTAACTTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646584.1 |
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| CDS GCA 72 bp | TTCGCAGTGAGGGTGGGAGGATGTACAGGCTACAGGTaGCCCGGCGGGAAGGAGGTATCAGGCATGCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: FAVRVGGCTGYR*PGGKEVSGMQH Trigger: GTGTTGCATGCCTGATACCTCCTTCCCGCCGGGGCACCTGTAGCCTGTACATCCTCCCACCCTCACTGCGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646584.1 |
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| CDS CCA 72 bp | ATATCATCATCCATGGTGAGTGCAAAGACCCTGACGTaGGAGCCCGATTGGCCCAGGGTGTGGCCGGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ISSSMVSAKTLT*EPDWPRVWPGE Trigger: CTCCCCCGGCCACACCCTGGGCCAATCGGGCTCCCACGTCAGGGTCTTTGCACTCACCATGGATGATGATAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443528.5 |
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| CDS TCA 72 bp | GAGAGTCCTACGGAAAACGGCAGAAGAGAGAACCAGTaGGAAAGGGCGCAGCTCCGGGAGGCCAGGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ESPTENGRRENQ*ERAQLREARKE Trigger: CTCCTTCCTGGCCTCCCGGAGCTGCGCCCTTTCTCACTGGTTCTCTCTTCTGCCGTTTTCCGTAGGACTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462494.5 |
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| CDS TCA 72 bp | GTATCAGGCATGCAACACAAGTTACTGCAAAGACCCTaGCGTGGGAGCCCGATTGGCCCAGGGTGTGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: VSGMQHKLLQRP*RGSPIGPGCGR Trigger: CCGGCCACACCCTGGGCCAATCGGGCTCCCACGTCAGGGTCTTTGCAGTAACTTGTGTTGCATGCCTGATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646584.1 |
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| CDS GCA 72 bp | AGGGAGACTCCATCTGGACACCGTTGCCAATCTAAGTaGCAATCCGAGCCGCCTGCGGATCAGGCTCGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RETPSGHRCQSK*QSEPPADQARR Trigger: TCTGCGAGCCTGATCCGCAGGCGGCTCGGATTGGCACTTAGATTGGCAACGGTGTCCAGATGGAGTCTCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646584.1 |
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| CDS CCA 72 bp | ATATCATCATCCATGGTGAGCATAAAAGGCAAACACTaGTCGGAGGCGTCCCCGCGGCGCGCGGCAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ISSSMVSIKGKH*SEASPRRAAGS Trigger: GCTTCCTGCCGCGCGCCGCGGGGACGCCTCCGACCAGTGTTTGCCTTTTATGCTCACCATGGATGATGATAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000417101.2 |
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| CDS CCA 72 bp | ATGTTGAAACTCCATCTCTATGCAAAGACCCTGACGTaGGAGCCCGATTGGCCCAGGGTGTGGCCGGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: MLKLHLYAKTLT*EPDWPRVWPGE Trigger: CTCCCCCGGCCACACCCTGGGCCAATCGGGCTCCCACGTCAGGGTCTTTGCATAGAGATGGAGTTTCAACAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000414620.1 |
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| CDS CAA 90 bp | CGTGGCCAAGTCCCCCAGGTGAGCGCTGGGACGCTGCCTAGTGAATaGAATGACTCGTATTGTTCCCAAGGTTGCAGCTGTGGCCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RGQVPQVSAGTLPSE*NDSYCSQGCSCGLR Trigger: TCGGAGGCCACAGCTGCAACCTTGGGAACAATACGAGTCATTCAATTCACTAGGCAGCGTCCCAGCGCTCACCTGGGGGACTTGGCCACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414620.1 ENST00000443528.5 |
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| CDS TCA 72 bp | GTATTGTTCCCAAGGTTGCAGCTGTGGCCTCCGAAGTaGCTCAGCAGAATTCCTGGGAGTTGGGGTGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: VLFPRLQLWPPK*LSRIPGSWGGG Trigger: GCCCCCACCCCAACTCCCAGGAATTCTGCTGAGTCACTTCGGAGGCCACAGCTGCAACCTTGGGAACAATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443528.5 |
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| CDS GCA 72 bp | GCTACAGGTGCCCCGGCGGGAAGGAGGTATCAGGCATaGAACACAAGTTACTGCAAAGACCCTGACGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ATGAPAGRRYQA*NTSYCKDPDVG Trigger: TCCCACGTCAGGGTCTTTGCAGTAACTTGTGTTGCATGCCTGATACCTCCTTCCCGCCGGGGCACCTGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646584.1 |
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| CDS CAA 72 bp | GTCCCCCAGGTGAGCGCTGGGACGCTGCCTAGTGAATaGAATGACTCGTATTGTTCCCAAGGTTGCAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VPQVSAGTLPSE*NDSYCSQGCSC Trigger: ACAGCTGCAACCTTGGGAACAATACGAGTCATTCAATTCACTAGGCAGCGTCCCAGCGCTCACCTGGGGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000414620.1 ENST00000443528.5 |
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| CDS CAA 72 bp | CACACTCCAAGGCCGCTTTACACCAGCCTCATGGCCTaGTCACACGAGCCAGTGTTAGTACCTACACCCACA | + |
|
Preference number: 6 (lower is better) Translates to: HTPRPLYTSLMA*SHEPVLVPTPT Trigger: TGTGGGTGTAGGTACTAACACTGGCTCGTGTGACAAGGCCATGAGGCTGGTGTAAAGCGGCCTTGGAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462494.5 ENST00000477812.2 |
||
| CDS GCA 72 bp | GGGGTCTTGGGATGGGGAGTCTGTTCAGACCTACTGTaGACCTACTTAATACACACTCCAAGGCCGCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: GVLGWGVCSDLL*TYLIHTPRPLY Trigger: GTAAAGCGGCCTTGGAGTGTGTATTAAGTAGGTGCACAGTAGGTCTGAACAGACTCCCCATCCCAAGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000462494.5 ENST00000477812.2 |
||
| CDS CCA 72 bp | GCAAAGAACACGGCTAAGTGTGCTGGGGTCTTGGGATaGGGAGTCTGTTCAGACCTACTGTGCACCTACTTA | + |
|
Preference number: 6 (lower is better) Translates to: AKNTAKCAGVLG*GVCSDLLCTYL Trigger: TAAGTAGGTGCACAGTAGGTCTGAACAGACTCCCCATCCCAAGACCCCAGCACACTTAGCCGTGTTCTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462494.5 ENST00000477812.2 |
||
| CDS CCA 72 bp | AAAGTGCAAAGAACACGGCTAAGTGTGCTGGGGTCTTaGGATGGGGAGTCTGTTCAGACCTACTGTGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: KVQRTRLSVLGS*DGESVQTYCAP Trigger: AGGTGCACAGTAGGTCTGAACAGACTCCCCATCCCAAGACCCCAGCACACTTAGCCGTGTTCTTTGCACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000462494.5 ENST00000477812.2 |
||
| CDS CAA 90 bp | TACTTAATACACACTCCAAGGCCGCTTTACACCAGCCTCATGGCCTaGTCACACGAGCCAGTGTTAGTACCTACACCCACAACACTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: YLIHTPRPLYTSLMA*SHEPVLVPTPTTLS Trigger: AGACAGTGTTGTGGGTGTAGGTACTAACACTGGCTCGTGTGACAAGGCCATGAGGCTGGTGTAAAGCGGCCTTGGAGTGTGTATTAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000462494.5 ENST00000477812.2 |
||
| CDS CAA 90 bp | GGACATGCAGAAAGTGCAAAGAACACGGCTAAGTGTGCTGGGGTCTaGGGATGGGGAGTCTGTTCAGACCTACTGTGCACCTACTTAATA | + |
|
Preference number: 6 (lower is better) Translates to: GHAESAKNTAKCAGV*GWGVCSDLLCTYLI Trigger: TATTAAGTAGGTGCACAGTAGGTCTGAACAGACTCCCCATCCCAAGACCCCAGCACACTTAGCCGTGTTCTTTGCACTTTCTGCATGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000462494.5 ENST00000477812.2 |
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| CDS GCA 72 bp | CCTAGTGAATTGAATGACTCGTATTGTTCCCAAGGTTaGAGCTGTGGCCTCCGAAGTGACTCAGCAGAATTC | + |
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Preference number: 6 (lower is better) Translates to: PSELNDSYCSQG*SCGLRSDSAEF Trigger: GAATTCTGCTGAGTCACTTCGGAGGCCACAGCTGCAACCTTGGGAACAATACGAGTCATTCAATTCACTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443528.5 |
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