RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACSS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000131069

Ensembl transcript IDs: ENST00000253382.5, ENST00000360596.7, ENST00000461051.1, ENST00000464399.2, ENST00000467019.5, ENST00000470315.1, ENST00000473172.5, ENST00000475459.6, ENST00000476922.5, ENST00000477932.5, ENST00000480274.1, ENST00000480978.5, ENST00000481284.5, ENST00000481971.5, ENST00000484354.1, ENST00000488172.5, ENST00000490046.1, ENST00000490464.1, ENST00000493250.1, ENST00000493805.6, ENST00000494727.1, ENST00000497927.5

Found 669 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGGGCACCTACCACCCGGTGGTACCATAGCCAGGCCTCAGGGTTaGTGGGTTCACCCACTGTGCCTAACACCTGCAAGGATGCCCGGC +
Preference number: 1 (lower is better)
Translates to: AGHLPPGGTIARPQG*WVHPLCLTPARMPG
Trigger: GCCGGGCATCCTTGCAGGTGTTAGGCACAGTGGGTGAACCCATCAACCCTGAGGCCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR CCA 90 bp CAGAAGGTGTCCACGATGGGGCAGCGCTGGGCACCTACCACCCGGTaGTACCATAGCCAGGCCTCAGGGTTGATGGGTTCACCCACTGTG +
Preference number: 1 (lower is better)
Translates to: QKVSTMGQRWAPTTR*YHSQASGLMGSPTV
Trigger: CACAGTGGGTGAACCCATCAACCCTGAGGCCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR CCA 90 bp CCACCTGTCTCTGTTTGCCAGAAGGTGTCCACGATGGGGCAGCGCTaGGCACCTACCACCCGGTGGTACCATAGCCAGGCCTCAGGGTTG +
Preference number: 1 (lower is better)
Translates to: PPVSVCQKVSTMGQR*APTTRWYHSQASGL
Trigger: CAACCCTGAGGCCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCTGGCAAACAGAGACAGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR CCA 90 bp TCAACATGTGGCCACCTGTCTCTGTTTGCCAGAAGGTGTCCACGATaGGGCAGCGCTGGGCACCTACCACCCGGTGGTACCATAGCCAGG +
Preference number: 1 (lower is better)
Translates to: STCGHLSLFARRCPR*GSAGHLPPGGTIAR
Trigger: CCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCTGGCAAACAGAGACAGGTGGCCACATGTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR CCA 90 bp ACCCTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATGAAGAGTaGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGC +
Preference number: 1 (lower is better)
Translates to: TLGFACGATGVQDEE*VLGITPLGLTLIPC
Trigger: GCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
3UTR TCA 90 bp GAACCACACCCTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATaGAGAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCAT +
Preference number: 1 (lower is better)
Translates to: EPHPWVCLWSHWCTG*RVGPRHHTTRAHTH
Trigger: ATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
3UTR GCA 90 bp GAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTaGCTCTTGCATGAGCTCATGCCACCACAAGTCAATCCCTTGGTT +
Preference number: 1 (lower is better)
Translates to: EWVLGITPLGLTLIP*LLHELMPPQVNPLV
Trigger: AACCAAGGGATTGACTTGTGGTGGCATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
3UTR CCA 90 bp GTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCAGACAGCTaGTCAAGGGAGGGTAGTGTGGGTCAACACTGGCCCTCAGCACTC +
Preference number: 1 (lower is better)
Translates to: VVSTWRQSWFPVPDS*SREGSVGQHWPSAL
Trigger: GAGTGCTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTGACCAGCTGTCTGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR TCA 90 bp CAGGATCATGTTCACTGGATGGTCAGGCAGCGGTGGCTGAAGAGGTaGCTGATGACAGATGGGTCAGCCACAGTAGACATGTCCCCGAGG +
Preference number: 1 (lower is better)
Translates to: QDHVHWMVRQRWLKR*LMTDGSATVDMSPR
Trigger: CCTCGGGGACATGTCTACTGTGGCTGACCCATCTGTCATCAGTCACCTCTTCAGCCACCGCTGCCTGACCATCCAGTGAACATGATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR CCA 90 bp CTGGATGGTCAGGCAGCGGTGGCTGAAGAGGTGACTGATGACAGATaGGTCAGCCACAGTAGACATGTCCCCGAGGTCATGGTCATTCTG +
Preference number: 1 (lower is better)
Translates to: LDGQAAVAEEVTDDR*VSHSRHVPEVMVIL
Trigger: CAGAATGACCATGACCTCGGGGACATGTCTACTGTGGCTGACCCATCTGTCATCAGTCACCTCTTCAGCCACCGCTGCCTGACCATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR TCA 90 bp CGGCATCACACCACTCGGGCTCACACTCATCCCCTGCCTCTTGCATaGGCTCATGCCACCACAAGTCAATCCCTTGGTTCCATGAGATCT +
Preference number: 1 (lower is better)
Translates to: RHHTTRAHTHPLPLA*AHATTSQSLGSMRS
Trigger: AGATCTCATGGAACCAAGGGATTGACTTGTGGTGGCATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR TCA 90 bp GCCCACCACAGCTGCCTCTGCAACAGCCTCATGTTCCACAAGTGCTaGCTCCACCTCTGCTGTACTCAGCAGGTGTCCAGATACATTGAG +
Preference number: 1 (lower is better)
Translates to: AHHSCLCNSLMFHKC*LHLCCTQQVSRYIE
Trigger: CTCAATGTATCTGGACACCTGCTGAGTACAGCAGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGCAGCTGTGGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR TCA 90 bp GATGGGTCAGCCACAGTAGACATGTCCCCGAGGTCATGGTCATTCTaGGCAATCTTCCGAAGCACTCGCCTCATGATTTTCCCTGAGCGG +
Preference number: 1 (lower is better)
Translates to: DGSATVDMSPRSWSF*AIFRSTRLMIFPER
Trigger: CCGCTCAGGGAAAATCATGAGGCGAGTGCTTCGGAAGATTGCTCAGAATGACCATGACCTCGGGGACATGTCTACTGTGGCTGACCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR GCA 90 bp CACCACTCGGGCTCACACTCATCCCCTGCCTCTTGCATGAGCTCATaGCACCACAAGTCAATCCCTTGGTTCCATGAGATCTGCACATCT +
Preference number: 1 (lower is better)
Translates to: HHSGSHSSPASCMSS*HHKSIPWFHEICTS
Trigger: AGATGTGCAGATCTCATGGAACCAAGGGATTGACTTGTGGTGGCATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAGCCCGAGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR CCA 90 bp CTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTaGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAGAAGCAGC +
Preference number: 1 (lower is better)
Translates to: LNLPIQPLEPMGRQY*HLAQKGIQTQNRSS
Trigger: GCTGCTTCTGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR TCA 90 bp TACACAGCTGCCTCCCTGCTTCAGTGGAGGCCCTCACATCCCCTTTaGACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTT +
Preference number: 1 (lower is better)
Translates to: YTAASLLQWRPSHPL*TLNLGRRGSLFVSV
Trigger: AACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGGCCTCCACTGAAGCAGGGAGGCAGCTGTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR GCA 90 bp CTGTGGGTGCTGTGTAGAACTTGGTCACCTTGTATTTGTCCACAATaGTCCACAGGCGGTTCACGTCCGGATATGTGGGAATCCCCTCAA +
Preference number: 1 (lower is better)
Translates to: LWVLCRTWSPCICPQ*STGGSRPDMWESPQ
Trigger: TTGAGGGGATTCCCACATATCCGGACGTGAACCGCCTGTGGAGCATTGTGGACAAATACAAGGTGACCAAGTTCTACACAGCACCCACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR CCA 90 bp CCCTGCTTCAGTGGAGGCCCTCACATCCCCTTTGAACACTTAACTTaGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGA +
Preference number: 1 (lower is better)
Translates to: PCFSGGPHIPFEHLT*VGEVAFSSLFWVLR
Trigger: TCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGGCCTCCACTGAAGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR GCA 90 bp TGGCCCATAGGTGACGTAGGAATGACCAGTGATCCAACCAATGTCTaGCGTGCACCAGAACACATCCTCTGCATGGAAGTCAAACACATA +
Preference number: 1 (lower is better)
Translates to: WPIGDVGMTSDPTNV*RAPEHILCMEVKHI
Trigger: TATGTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTTGGATCACTGGTCATTCCTACGTCACCTATGGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR GCA 90 bp GACAGGCTCATCTCCAAACTTCATGAGCAGACGGATGGCTGTGGGTaGTGTGTAGAACTTGGTCACCTTGTATTTGTCCACAATGCTCCA +
Preference number: 1 (lower is better)
Translates to: DRLISKLHEQTDGCG*CVELGHLVFVHNAP
Trigger: TGGAGCATTGTGGACAAATACAAGGTGACCAAGTTCTACACAGCACCCACAGCCATCCGTCTGCTCATGAAGTTTGGAGATGAGCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR GCA 90 bp ACCTTCAGCTTCACCTTCCAACTCTTCCCCGGACTCATTCAGGATTaGAGGAGCTACACCAAAGAATGGGAAAGTAGCAGAACCGGGTTT +
Preference number: 1 (lower is better)
Translates to: TFSFTFQLFPGLIQD*RSYTKEWESSRTGF
Trigger: AAACCCGGTTCTGCTACTTTCCCATTCTTTGGTGTAGCTCCTGCAATCCTGAATGAGTCCGGGGAAGAGTTGGAAGGTGAAGCTGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR TCA 90 bp CCGTGCACCAGAACACATCCTCTGCATGGAAGTCAAACACATACTTaGAGGTTGTGGCTACATAGAGCATGTAGCCCCCAACTGTGTGAA +
Preference number: 1 (lower is better)
Translates to: PCTRTHPLHGSQTHT*RLWLHRACSPQLCE
Trigger: TTCACACAGTTGGGGGCTACATGCTCTATGTAGCCACAACCTTCAAGTATGTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR GCA 90 bp ACCAGTGATCCAACCAATGTCTGCCGTGCACCAGAACACATCCTCTaGATGGAAGTCAAACACATACTTGAAGGTTGTGGCTACATAGAG +
Preference number: 1 (lower is better)
Translates to: TSDPTNVCRAPEHIL*MEVKHILEGCGYIE
Trigger: CTCTATGTAGCCACAACCTTCAAGTATGTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTTGGATCACTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR CCA 90 bp AAACACATTTACTCCTTCAAAGAAGCAGATGATCTGAATACCCTCTaGAGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGA +
Preference number: 1 (lower is better)
Translates to: KHIYSFKEADDLNTL*RLNLPIQPLEPMGR
Trigger: TCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCTCCAGAGGGTATTCAGATCATCTGCTTCTTTGAAGGAGTAAATGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR CAA 90 bp CGCTGGGCACCTACCACCCGGTGGTACCATAGCCAGGCCTCAGGGTaGATGGGTTCACCCACTGTGCCTAACACCTGCAAGGATGCCCGG +
Preference number: 2 (lower is better)
Translates to: RWAPTTRWYHSQASG*MGSPTVPNTCKDAR
Trigger: CCGGGCATCCTTGCAGGTGTTAGGCACAGTGGGTGAACCCATCAACCCTGAGGCCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GGTAGTGTGGGTCAACACTGGCCCTCAGCACTCCTGAGGGGGCAAAGAGGATGGGCCTCCCTGCTTCAGTaGAGGCCCTCACATCCCCTT +
Preference number: 2 (lower is better)
Translates to: GSVGQHWPSALLRGQRGWASLLQ*RPSHPL
Trigger: AAGGGGATGTGAGGGCCTCCACTGAAGCAGGGAGGC...CCATCCTCTTTGCCCCCTCAGGAGTGCTGAGGGCCAGTGTTGACCCACACTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp CTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAACACAGCTGCCTCCCTaGTTCAGTGGAGGCCCTCAC +
Preference number: 2 (lower is better)
Translates to: LPIQPLEPMGRQYWHLAQTQLPP*FSGGPH
Trigger: GTGAGGGCCTCCACTGAAGCAGGGAGGCAGCTGTGT...TTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp CCCATGCCGAGCTCTGCCCGCCCCAGGTGCTTGACCACAATGCAGCATCTTACTAGTGCAAAGCCCCAATaGGGGCACATGCCAGCATGG +
Preference number: 2 (lower is better)
Translates to: PMPSSARPRCLTTMQHLTSAKPQ*GHMPAW
Trigger: CCATGCTGGCATGTGCCCGCATTGGGGCTTTGCACT...AGTAAGATGCTGCATTGTGGTCAAGCACCTGGGGCGGGCAGAGCTCGGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR-3UTR CCA 90 bp CTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAGCCTCCCTGCTTCAGTaGAGGCCCTCACATCCCCTT +
Preference number: 2 (lower is better)
Translates to: LPIQPLEPMGRQYWHLAQASLLQ*RPSHPL
Trigger: AAGGGGATGTGAGGGCCTCCACTGAAGCAGGGAGGC...TTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp TGTCCACGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGTACCATAGCCAGGATGGGCAGACAGTACTaGCATCTGGCACAAAAGGGA +
Preference number: 2 (lower is better)
Translates to: CPRWGSAGHLPPGGTIARMGRQY*HLAQKG
Trigger: TCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCAT...CCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GTTTGCCAGAAGGTGTCCACGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGCCTCAAACAAAACACTaGTGGCACCATTGGCCAGTG +
Preference number: 2 (lower is better)
Translates to: VCQKVSTMGQRWAPTTRWPQTKH*WHHWPV
Trigger: CACTGGCCAATGGTGCCACCAGTGTTTTGTTTGAGG...CCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCTGGCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp TGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCAACGATGGGGCAGCGCTaGGCACCTACCACCCGGTGG +
Preference number: 2 (lower is better)
Translates to: WQSQDVVSTWRQSWFPVPTMGQR*APTTRW
Trigger: CCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGT...TGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp TCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAGACTGAGGCTGACCTaGGCCCTGTCCTTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: SAHTAPGANGQTVLASGTRLRLT*ALSFLP
Trigger: AGGCAGAAAGGACAGGGCCCAGGTCAGCCTCAGTCT...TGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp TGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGACTGAGGCTGACCTaGGCCCTGTCCTTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: CPYSPWSQWADSTGIWHKRLRLT*ALSFLP
Trigger: AGGCAGAAAGGACAGGGCCCAGGTCAGCCTCAGTCT...TTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGTGCCCATACAGCCCCTaGAGCCAATGGGCAGACAGT +
Preference number: 2 (lower is better)
Translates to: PIQPLEPMGRQYWHLAQKCPYSP*SQWADS
Trigger: ACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA...CTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR TCA 90 bp CCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACTCACCCTTCACAGGATaGGGGTGGCCCACCACAGCT +
Preference number: 2 (lower is better)
Translates to: PGANGQTVLASGTKGNSDSPFTG*GWPTTA
Trigger: AGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGA...GTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR TCA 90 bp GGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTCAGTGTCACCCTTCACAGGATaGGGGTGGCCCACCACAGCT +
Preference number: 2 (lower is better)
Translates to: GLPKRADIGLHSCLPASVSPFTG*GWPTTA
Trigger: AGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGA...CACTGAAGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCACCGGTCCCAGACAGCTaGTCAAGGGAGGGTAGTGTG +
Preference number: 2 (lower is better)
Translates to: GANGQTVLASGTKGNSDPPVPDS*SREGSV
Trigger: CACACTACCCTCCCTTGACCAGCTGTCTGGGACCGG...TGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTCAGTGCCGGTCCCAGACAGCTaGTCAAGGGAGGGTAGTGTG +
Preference number: 2 (lower is better)
Translates to: GLPKRADIGLHSCLPASVPVPDS*SREGSV
Trigger: CACACTACCCTCCCTTGACCAGCTGTCTGGGACCGG...CACTGAAGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGACCTGGAGACAAAGCTaGTTTCCGGTCCCAGACAGC +
Preference number: 2 (lower is better)
Translates to: PIQPLEPMGRQYWHLAQKTWRQS*FPVPDS
Trigger: GCTGTCTGGGACCGGAAACCAGCTTTGTCTCCAGGT...CTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp AGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCCGGGTTTCATGGGTGTaGCACCAGGAAGGGGAGTCA +
Preference number: 2 (lower is better)
Translates to: SPWSQWADSTGIWHKREFRVSWV*HQEGES
Trigger: TGACTCCCCTTCCTGGTGCCACACCCATGAAACCCG...GAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR TCA 90 bp GGTTTTAGGCAAGCCAGGTGCATTCTGGATGTAGTCTGGTGTGGCAATGGGGCCCCCGGCTATGCTTGGTaGCAGGCTCATCTCCAAACT +
Preference number: 2 (lower is better)
Translates to: GFRQARCILDVVWCGNGAPGYAW*QAHLQT
Trigger: AGTTTGGAGATGAGCCTGTCACCAAGCATAGCCGGG...GGCCCCATTGCCACACCAGACTACATCCAGAATGCACCTGGCTTGCCTAAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp TCCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTGTGGCCCACCACAGCTaGCTCTGCAACAGCCTCATG +
Preference number: 2 (lower is better)
Translates to: SFLPGSHRMLSLPGDKAGVAHHS*LCNSLM
Trigger: CATGAGGCTGTTGCAGAGGCAGCTGTGGTGGGCCAC...ACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTCTGCAGTCTGGACAAGGGAGGGTAGTGTaGGTCAACACTGGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: GEVAFSSLFWVLRALQSGQGRVV*VNTGPQ
Trigger: CTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTG...TCCAGACTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GCTTCACCTTCCAACTCTTCCCCGGACTCATTCAGGATTGCAGGAGCTACACCACAAGGGAGGGTAGTGTaGGTCAACACTGGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: ASPSNSSPDSFRIAGATPQGRVV*VNTGPQ
Trigger: CTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTG...TGGTGTAGCTCCTGCAATCCTGAATGAGTCCGGGGAAGAGTTGGAAGGTGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp TTGTGGCTACATAGAGCATGTAGCCCCCAACTGTGTGAACCACACCCTTGGGTTCCGGTCCCAGACAGCTaGTCAAGGGAGGGTAGTGTG +
Preference number: 2 (lower is better)
Translates to: LWLHRACSPQLCEPHPWVPVPDS*SREGSV
Trigger: CACACTACCCTCCCTTGACCAGCTGTCTGGGACCGG...AACCCAAGGGTGTGGTTCACACAGTTGGGGGCTACATGCTCTATGTAGCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CCGGGTTTCATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGGCCACCTGTCGATGTTGTCTCTACCTaGAGACAAAGCTGGTTTCCG +
Preference number: 2 (lower is better)
Translates to: PGFMGVAPGRGVNMWPPVDVVST*RQSWFP
Trigger: CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATC...GACAGGTGGCCACATGTTGACTCCCCTTCCTGGTGCCACACCCATGAAACCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGCCTGTCCTTTCTGCCTaGCAGTCACAGGATGTTGTC +
Preference number: 2 (lower is better)
Translates to: PIQPLEPMGRQYWHLAQKPVLSA*QSQDVV
Trigger: GACAACATCCTGTGACTGCCAGGCAGAAAGGACAGG...CTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CCTCTGGAGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTATTGGGGCTGAAGGTGTaGCCATCACACAAGGTGACA +
Preference number: 2 (lower is better)
Translates to: PLETESAHTAPGANGQTVLGLKV*PSHKVT
Trigger: TGTCACCTTGTGTGATGGCCACACCTTCAGCCCCAA...TACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCTCCAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GCATGTAGATGGCCACTCGGTCCCCCTTCTGAATGCCCTGTTTTCGGAGAACATCTGAGTGGTCTCCCCTaGCTCATTGCCCTCCCAGTA +
Preference number: 2 (lower is better)
Translates to: ACRWPLGPPSECPVFGEHLSGLP*LIALPV
Trigger: TACTGGGAGGGCAATGAGCCAGGGGAGACCACTCAG...ATGTTCTCCGAAAACAGGGCATTCAGAAGGGGGACCGAGTGGCCATCTACATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
3UTR-3UTR CCA 90 bp GCGTTCGTGGTTCCCATAGACTGTGCGCATGATCCCTGGCCAGGGCTGCTTGAAGGCCACCACAAGCTCTaGGATCATAGGCATGTAGAT +
Preference number: 2 (lower is better)
Translates to: AFVVPIDCAHDPWPGLLEGHHKL*DHRHVD
Trigger: ATCTACATGCCTATGATCCCAGAGCTTGTGGTGGCC...TTCAAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACGAACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR-3UTR TCA 90 bp GTACTGGGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTATACCCTCTGGAGACTaGATCTGCCCATACAGCCCC +
Preference number: 2 (lower is better)
Translates to: VLGLPKRADIGLHSCLPAIPSGD*ICPYSP
Trigger: GGGGCTGTATGGGCAGATTCAGTCTCCAGAGGGTAT...AGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCCCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR TCA 90 bp GTGACAGGCTCATCTCCAAACTTCATGAGCAGACGGATGGCTGTGGGTGCTGTGGAAGCTGATGGTATGTaGTCTGAGTGGTCTCCCCTG +
Preference number: 2 (lower is better)
Translates to: VTGSSPNFMSRRMAVGAVEADGM*SEWSPL
Trigger: CAGGGGAGACCACTCAGATCACATACCATCAGCTTC...CACAGCACCCACAGCCATCCGTCTGCTCATGAAGTTTGGAGATGAGCCTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR-3UTR TCA 90 bp TCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCACATCTCCAAACTTCATaGGCAGACGGATGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: SLICFLSSSVSLGLKVWPHLQTS*ADGWLW
Trigger: CCACAGCCATCCGTCTGCTCATGAAGTTTGGAGATG...TGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR TCA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGCCCGGCTATGCTTGGTaGCAGGCTCATCTCCAAACT +
Preference number: 2 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPPGYAW*QAHLQT
Trigger: AGTTTGGAGATGAGCCTGTCACCAAGCATAGCCGGG...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp CCTCTGGAGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTAATAGGATTACACAGCTaGCTCCCTGCTTCAGTGGAG +
Preference number: 2 (lower is better)
Translates to: PLETESAHTAPGANGQTVIGLHS*LPASVE
Trigger: CTCCACTGAAGCAGGGAGGCAGCTGTGTAATCCTAT...TACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCTCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GTACTGGGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTACCTGGAGACAAAGCTaGTTTCCGGTCCCAGACAGC +
Preference number: 2 (lower is better)
Translates to: VLGLPKRADIGLHSCLPATWRQS*FPVPDS
Trigger: GCTGTCTGGGACCGGAAACCAGCTTTGTCTCCAGGT...AGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCCCAGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp AGAACTTGGTCACCTTGTATTTGTCCACAATGCTCCACAGGCGGTTCACGTCCGAGACTGAGGCTGACCTaGGCCCTGTCCTTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: RTWSPCICPQCSTGGSRPRLRLT*ALSFLP
Trigger: AGGCAGAAAGGACAGGGCCCAGGTCAGCCTCAGTCT...CGGACGTGAACCGCCTGTGGAGCATTGTGGACAAATACAAGGTGACCAAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CTCTGCTGTACTCAGCAGGTGTCCAGATACATTGAGCATGTCATCAATCCTGCCGCCTCCCTGCTTCAGTaGAGGCCCTCACATCCCCTT +
Preference number: 2 (lower is better)
Translates to: LCCTQQVSRYIEHVINPAASLLQ*RPSHPL
Trigger: AAGGGGATGTGAGGGCCTCCACTGAAGCAGGGAGGC...GGCAGGATTGATGACATGCTCAATGTATCTGGACACCTGCTGAGTACAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCGCCTCCCTGCTTCAGTaGAGGCCCTCACATCCCCTT +
Preference number: 2 (lower is better)
Translates to: LNLGRRGSLFVSVLGSESASLLQ*RPSHPL
Trigger: AAGGGGATGTGAGGGCCTCCACTGAAGCAGGGAGGC...GCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp TTCGTGGTTCCCATAGACTGTGCGCATGATCCCTGGCCAGGGCTGCTTGAACACATGGGCAGACAGTACTaGCATCTGGCACAAAAGGGA +
Preference number: 2 (lower is better)
Translates to: FVVPIDCAHDPWPGLLEHMGRQY*HLAQKG
Trigger: TCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCAT...GTGTTCAAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GTGACTGATGACAGATGGGTCAGCCACAGTAGACATGTCCCCGAGGTCATGGTCCAAACAAAACACTGGTaGCACCATTGGCCAGTGGCC +
Preference number: 2 (lower is better)
Translates to: VTDDRWVSHSRHVPEVMVQTKHW*HHWPVA
Trigger: GGCCACTGGCCAATGGTGCCACCAGTGTTTTGTTTG...GACCATGACCTCGGGGACATGTCTACTGTGGCTGACCCATCTGTCATCAGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGCTCACACTCATCCCCTaGCTCTTGCATGAGCTCATG +
Preference number: 2 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPLTLIP*LLHELM
Trigger: CATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAG...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp CTGCAACAGCCTCATGTTCCACAAGTGCTGACTCCACCTCTGCTGTACTCAGCAACGGATGGCTGTGGGTaGTGTGTAGAACTTGGTCAC +
Preference number: 2 (lower is better)
Translates to: LQQPHVPQVLTPPLLYSATDGCG*CVELGH
Trigger: GTGACCAAGTTCTACACAGCACCCACAGCCATCCGT...TGCTGAGTACAGCAGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACACCTGGAGACAAAGCTaGTTTCCGGTCCCAGACAGC +
Preference number: 2 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNTWRQS*FPVPDS
Trigger: GCTGTCTGGGACCGGAAACCAGCTTTGTCTCCAGGT...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCTGTCCTTTCTGCCTaGCAGTCACAGGATGTTGTC +
Preference number: 2 (lower is better)
Translates to: PGANGQTVLASGTKGNSDPVLSA*QSQDVV
Trigger: GACAACATCCTGTGACTGCCAGGCAGAAAGGACAGG...GTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp TCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCAAGCCTGCAAACACAATaGAGTGCAAAGCCCCAATGC +
Preference number: 2 (lower is better)
Translates to: SLICFLSSSVSLGLKVWPSLQTQ*SAKPQC
Trigger: GCATTGGGGCTTTGCACTCCATTGTGTTTGCAGGCT...TGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR-3UTR CCA 90 bp GATAACCTTCAGCTTCACCTTCCAACTCTTCCCCGGACTCATTCAGGATTGCAGGGCACCATTGGCCAGTaGCCCATAGGTGACGTAGGA +
Preference number: 2 (lower is better)
Translates to: DNLQLHLPTLPRTHSGLQGTIGQ*PIGDVG
Trigger: TCCTACGTCACCTATGGGCCACTGGCCAATGGTGCC...CTGCAATCCTGAATGAGTCCGGGGAAGAGTTGGAAGGTGAAGCTGAAGGTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR TCA 90 bp GGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCACCCTCACATCCCCTTTaGACACTTAACTTGGGTAGG +
Preference number: 2 (lower is better)
Translates to: GANGQTVLASGTKGNSDPPSHPL*TLNLGR
Trigger: CCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGG...TGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR TCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCCCCTCACATCCCCTTTaGACACTTAACTTGGGTAGG +
Preference number: 2 (lower is better)
Translates to: WSQWADSTGIWHKREFRPPSHPL*TLNLGR
Trigger: CCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGG...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR TCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCGGCCATCACACAAGGTaGCAAAGCAGTAGAGGCATT +
Preference number: 2 (lower is better)
Translates to: WSQWADSTGIWHKREFRPGHHTR*QSSRGI
Trigger: AATGCCTCTACTGCTTTGTCACCTTGTGTGATGGCC...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp GCTTCACCTTCCAACTCTTCCCCGGACTCATTCAGGATTGCAGGAGCTACACCAATAGGATTACACAGCTaGCTCCCTGCTTCAGTGGAG +
Preference number: 2 (lower is better)
Translates to: ASPSNSSPDSFRIAGATPIGLHS*LPASVE
Trigger: CTCCACTGAAGCAGGGAGGCAGCTGTGTAATCCTAT...TGGTGTAGCTCCTGCAATCCTGAATGAGTCCGGGGAAGAGTTGGAAGGTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp GTGACTGATGACAGATGGGTCAGCCACAGTAGACATGTCCCCGAGGTCATGGTCTGTATTTGTCCACAATaGTCCACAGGCGGTTCACGT +
Preference number: 2 (lower is better)
Translates to: VTDDRWVSHSRHVPEVMVCICPQ*STGGSR
Trigger: ACGTGAACCGCCTGTGGAGCATTGTGGACAAATACA...GACCATGACCTCGGGGACATGTCTACTGTGGCTGACCCATCTGTCATCAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp TTCGTGGTTCCCATAGACTGTGCGCATGATCCCTGGCCAGGGCTGCTTGAACACGGACTCATTCAGGATTaGAGGAGCTACACCAAAGAA +
Preference number: 2 (lower is better)
Translates to: FVVPIDCAHDPWPGLLEHGLIQD*RSYTKE
Trigger: TTCTTTGGTGTAGCTCCTGCAATCCTGAATGAGTCC...GTGTTCAAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp AGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCTTTAGGCAAGCCAGGTaGATTCTGGATGTAGTCTGG +
Preference number: 2 (lower is better)
Translates to: SPWSQWADSTGIWHKREFFRQAR*ILDVVW
Trigger: CCAGACTACATCCAGAATGCACCTGGCTTGCCTAAA...GAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGAGGATGGGCAAAGTTTaGAGCAGGAGGAATCCTAGG +
Preference number: 2 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPRMGKV*SRRNPR
Trigger: CCTAGGATTCCTCCTGCTCCAAACTTTGCCCATCCT...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GGTAGTGTGGGTCAACACTGGCCCTCAGCACTCCTGAGGGGGCAAAGAGGATGGTTTGAACACTTAACTTaGGTAGGAGAGGTAGCCTTT +
Preference number: 2 (lower is better)
Translates to: GSVGQHWPSALLRGQRGWFEHLT*VGEVAF
Trigger: AAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA...CCATCCTCTTTGCCCCCTCAGGAGTGCTGAGGGCCAGTGTTGACCCACACTACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGATGGGCAGACAGTACTaGCATCTGGCACAAAAGGGA +
Preference number: 2 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPMGRQY*HLAQKG
Trigger: TCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCAT...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CAATGTCTGCCGTGCACCAGAACACATCCTCTGCATGGAAGTCAAACACATACTCTGAGTGGTCTCCCCTaGCTCATTGCCCTCCCAGTA +
Preference number: 2 (lower is better)
Translates to: QCLPCTRTHPLHGSQTHTLSGLP*LIALPV
Trigger: TACTGGGAGGGCAATGAGCCAGGGGAGACCACTCAG...AGTATGTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCAGACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR-3UTR TCA 90 bp GTACTGGGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTGGTGTCCAGATACATTaGGCATGTCATCAATCCTGC +
Preference number: 2 (lower is better)
Translates to: VLGLPKRADIGLHSCLPAGVQIH*ACHQSC
Trigger: GCAGGATTGATGACATGCTCAATGTATCTGGACACC...AGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCCCAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CTTTTCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGAGGATGGGCAAAGTTTaGAGCAGGAGGAATCCTAGG +
Preference number: 2 (lower is better)
Translates to: LFSNLLLELLGELGAEGVRMGKV*SRRNPR
Trigger: CCTAGGATTCCTCCTGCTCCAAACTTTGCCCATCCT...CACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACGATGTTGTCTCTACCTaGAGACAAAGCTGGTTTCCG +
Preference number: 2 (lower is better)
Translates to: PGANGQTVLASGTKGNSDDVVST*RQSWFP
Trigger: CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATC...GTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTGGGCTTGAGCCTGACTaGGGCAAGAAAACAGAGTTT +
Preference number: 2 (lower is better)
Translates to: PFCLAVTGCCLYLETKLVGLEPD*GKKTEF
Trigger: AAACTCTGTTTTCTTGCCCCAGTCAGGCTCAAGCCC...AACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp TCCTACCACAATGGAGTGCAAAGCCCCAATGCGGGCACATGCCAGCATGGCCACCCAAGCTTTTTCTCATaGACATTTCGATCCAGTACA +
Preference number: 2 (lower is better)
Translates to: SYHNGVQSPNAGTCQHGHPSFFS*TFRSST
Trigger: TGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGG...GTGGCCATGCTGGCATGTGCCCGCATTGGGGCTTTGCACTCCATTGTGGTAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480274.1
3UTR CAA 90 bp CTTCTGAATGCCCTGTTTTCGGAGAACATTGCTGAACTGACACACTaGGACCAGAAGCTGATGGTATGTGATCTGAGTGGTCTCCCCTGG +
Preference number: 2 (lower is better)
Translates to: LLNALFSENIAELTH*DQKLMVCDLSGLPW
Trigger: CCAGGGGAGACCACTCAGATCACATACCATCAGCTTCTGGTCCAAGTGTGTCAGTTCAGCAATGTTCTCCGAAAACAGGGCATTCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
3UTR-3UTR TCA 90 bp CAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAACCCGCCCCAGGTGCTTaGCCACAATGCAGCATCTTA +
Preference number: 2 (lower is better)
Translates to: QGRQAPLALGTKHIYSFKPAPGA*PQCSIL
Trigger: TAAGATGCTGCATTGTGGTCAAGCACCTGGGGCGGG...TTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR-3UTR GCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTTCTGCCCGCCCCAGGTaGTTGACCACAATGCAGCAT +
Preference number: 2 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVSARPR*LTTMQH
Trigger: ATGCTGCATTGTGGTCAAGCACCTGGGGCGGGCAGA...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR-3UTR CCA 90 bp ATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCACCTGGAGACAAAGCTaGTTTCCGGTCCCAGACAGC +
Preference number: 2 (lower is better)
Translates to: IPFEHLTWVGEVAFSSLFTWRQS*FPVPDS
Trigger: GCTGTCTGGGACCGGAAACCAGCTTTGTCTCCAGGT...GAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAATTTTCGTCTCTGTTCTaGGTTCTGAGAGCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: ANGQTVLASGTKGNSDPEFSSLF*VLRALQ
Trigger: CTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAA...TTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp TGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCAGACAGTACTGGCATCTaGCACAAAAGGGAATTCAGA +
Preference number: 2 (lower is better)
Translates to: WQSQDVVSTWRQSWFPVPDSTGI*HKREFR
Trigger: TCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTC...TGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CCAACCAATGTCTGCCGTGCACCAGAACACATCCTCTGCATGGAAGTCAAACACGGATGTAGTCTGGTGTaGCAATGGGGCCAATCTTTT +
Preference number: 2 (lower is better)
Translates to: PTNVCRAPEHILCMEVKHGCSLV*QWGQSF
Trigger: AAAAGATTGGCCCCATTGCCACACCAGACTACATCC...GTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR TCA 90 bp AGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAAACAGAGTTTCATCTaGGAATGTCTCTTATGGGCT +
Preference number: 2 (lower is better)
Translates to: SPWSQWADSTGIWHKREFKQSFI*ECLLWA
Trigger: AGCCCATAAGAGACATTCTCAGATGAAACTCTGTTT...GAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp CCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACATCTTTTCTCTAATCTaGTTCTTGAGCTCCTCGGTG +
Preference number: 2 (lower is better)
Translates to: PGANGQTVLASGTKGNSDIFSLI*FLSSSV
Trigger: CACCGAGGAGCTCAAGAAGCAGATTAGAGAAAAGAT...GTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACATCTTGCATGAGCTCATaGCACCACAAGTCAATCCCT +
Preference number: 2 (lower is better)
Translates to: QWADSTGIWHKREFRPRTSCMSS*HHKSIP
Trigger: AGGGATTGACTTGTGGTGGCATGAGCTCATGCAAGA...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp ATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCCCTGTCCTTTCTGCCTaGCAGTCACAGGATGTTGTC +
Preference number: 2 (lower is better)
Translates to: IPFEHLTWVGEVAFSSLFPVLSA*QSQDVV
Trigger: GACAACATCCTGTGACTGCCAGGCAGAAAGGACAGG...GAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACATTTTCGTCTCTGTTCTaGGTTCTGAGAGCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: QWADSTGIWHKREFRPRTFSSLF*VLRALQ
Trigger: CTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAA...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp TTCATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGGCCACCTGTCTCTGTTTTTGAACACTTAACTTaGGTAGGAGAGGTAGCCTTT +
Preference number: 2 (lower is better)
Translates to: FMGVAPGRGVNMWPPVSVFEHLT*VGEVAF
Trigger: AAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA...AACAGAGACAGGTGGCCACATGTTGACTCCCCTTCCTGGTGCCACACCCATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GTCCCGCTGGCAGCCATCTCCTGTAACATAGTATCCAGGAAACTTCTTAAAGTAATGTCTCTTATGGGCTaGGTTCTGTTCAGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: VPLAAISCNIVSRKLLKVMSLMG*VLFRGG
Trigger: CCCTCCCCTGAACAGAACCCAGCCCATAAGAGACAT...TACTTTAAGAAGTTTCCTGGATACTATGTTACAGGAGATGGCTGCCAGCGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR TCA 90 bp TTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTTTCGGAGAACATTGCTaGACTGACACACTTGGACCA +
Preference number: 2 (lower is better)
Translates to: LTWVGEVAFSSLFWVLRAFGEHC*TDTLGP
Trigger: TGGTCCAAGTGTGTCAGTTCAGCAATGTTCTCCGAA...AGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR-3UTR GCA 90 bp AATGTCTGCCGTGCACCAGAACACATCCTCTGCATGGAAGTCAAACACATACTTGGTCCCCCTTCTGAATaGCCTGTTTTCGGAGAACAT +
Preference number: 2 (lower is better)
Translates to: NVCRAPEHILCMEVKHILGPPSE*PVFGEH
Trigger: ATGTTCTCCGAAAACAGGGCATTCAGAAGGGGGACC...AAGTATGTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCAGACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR-3UTR GCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTGCAAACACAATGGAGTaGAAAGCCCCAATGCGGGCA +
Preference number: 2 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVANTME*KAPMRA
Trigger: TGCCCGCATTGGGGCTTTGCACTCCATTGTGTTTGC...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR-3UTR GCA 90 bp GTCCCGCTGGCAGCCATCTCCTGTAACATAGTATCCAGGAAACTTCTTAAAGTAAACCAATGTCTGCCGTaGACCAGAACACATCCTCTG +
Preference number: 2 (lower is better)
Translates to: VPLAAISCNIVSRKLLKVNQCLP*TRTHPL
Trigger: CAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTT...TACTTTAAGAAGTTTCCTGGATACTATGTTACAGGAGATGGCTGCCAGCGGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GTACTGGGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTTTGAACACTTAACTTaGGTAGGAGAGGTAGCCTTT +
Preference number: 2 (lower is better)
Translates to: VLGLPKRADIGLHSCLPAFEHLT*VGEVAF
Trigger: AAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA...AGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCCCAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTCTGCAGTCTGGACCAAGCTTTTTCTCATaGACATTTCGATCCAGTACA +
Preference number: 2 (lower is better)
Translates to: GEVAFSSLFWVLRALQSGPSFFS*TFRSST
Trigger: TGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGG...TCCAGACTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR-3UTR CCA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGAACACATCCTCTGCATaGAAGTCAAACACATACTTG +
Preference number: 2 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPNTSSA*KSNTYL
Trigger: CAAGTATGTGTTTGACTTCCATGCAGAGGATGTGTT...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp CTTTTCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGTGCTGTGTAGAACTTaGTCACCTTGTATTTGTCCA +
Preference number: 2 (lower is better)
Translates to: LFSNLLLELLGELGAEGVVLCRT*SPCICP
Trigger: TGGACAAATACAAGGTGACCAAGTTCTACACAGCAC...CACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR TCA 90 bp AAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGAAGCGGCCATCACACAAGGTaGCAAAGCAGTAGAGGCATT +
Preference number: 2 (lower is better)
Translates to: KTSSSGPRNKTHLLLQRSGHHTR*QSSRGI
Trigger: AATGCCTCTACTGCTTTGTCACCTTGTGTGATGGCC...GCTTCTTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR TCA 90 bp TACACCAAAGAATGGGAAAGTAGCAGAACCGGGTTTCATGGGTGTGGCACCAGGAGTCAAACACATACTTaGAGGTTGTGGCTACATAGA +
Preference number: 2 (lower is better)
Translates to: YTKEWESSRTGFHGCGTRSQTHT*RLWLHR
Trigger: TCTATGTAGCCACAACCTTCAAGTATGTGTTTGACT...CCTGGTGCCACACCCATGAAACCCGGTTCTGCTACTTTCCCATTCTTTGGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp TTTTCGGAGAACATTGCTGAACTGACACACTTGGACCAGAAGCTGATGGTATGTTCTCCCCTGGCTCATTaGCCTCCCAGTAAAAAGCAA +
Preference number: 2 (lower is better)
Translates to: FSENIAELTHLDQKLMVCSPLAH*PPSKKQ
Trigger: TTGCTTTTTACTGGGAGGGCAATGAGCCAGGGGAGA...ACATACCATCAGCTTCTGGTCCAAGTGTGTCAGTTCAGCAATGTTCTCCGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
3UTR-3UTR CCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTAGGATGGGCAAAGTTTaGAGCAGGAGGAATCCTAGG +
Preference number: 2 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVRMGKV*SRRNPR
Trigger: CCTAGGATTCCTCCTGCTCCAAACTTTGCCCATCCT...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR TCA 90 bp CTCTGCTGTACTCAGCAGGTGTCCAGATACATTGAGCATGTCATCAATCCTGCCAAACAGAGTTTCATCTaGGAATGTCTCTTATGGGCT +
Preference number: 2 (lower is better)
Translates to: LCCTQQVSRYIEHVINPAKQSFI*ECLLWA
Trigger: AGCCCATAAGAGACATTCTCAGATGAAACTCTGTTT...GGCAGGATTGATGACATGCTCAATGTATCTGGACACCTGCTGAGTACAGCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGAAATTCTGGATGTAGTCTaGTGTGGCAATGGGGCCAAT +
Preference number: 2 (lower is better)
Translates to: GRQAPLALGTKHIYSFKEILDVV*CGNGAN
Trigger: ATTGGCCCCATTGCCACACCAGACTACATCCAGAAT...TTCTTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTGACAGTACTGGCATCTaGCACAAAAGGGAATTCAGA +
Preference number: 2 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVDSTGI*HKREFR
Trigger: TCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTC...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CCA 90 bp GGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGAATTTGAACACTTAACTTaGGTAGGAGAGGTAGCCTTT +
Preference number: 2 (lower is better)
Translates to: GRQAPLALGTKHIYSFKEFEHLT*VGEVAF
Trigger: AAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA...TTCTTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR GCA 90 bp CAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGTTTTTAAGGGCAAGTaGATGCCCAATATAAGTACT +
Preference number: 2 (lower is better)
Translates to: QGRQAPLALGTKHIYSFKVFKGK*MPNIST
Trigger: AGTACTTATATTGGGCATGCACTTGCCCTTAAAAAC...TTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR GCA 72 bp GGGGGACTGGCTGGTGGAGTCACCCATGCCGAGCTCTaGCCGCCCCAGGTGCTTGACCACAATGCAGCATCT +
Preference number: 3 (lower is better)
Translates to: GGLAGGVTHAEL*PPQVLDHNAAS
Trigger: AGATGCTGCATTGTGGTCAAGCACCTGGGGCGGGCAGAGCTCGGCATGGGTGACTCCACCAGCCAGTCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR CCA 72 bp GGCCACCTGTCTCTGTTTGCCAGAAGGTGTCCACGATaGGGCAGCGCTGGGCACCTACCACCCGGTGGTACC +
Preference number: 3 (lower is better)
Translates to: GHLSLFARRCPR*GSAGHLPPGGT
Trigger: GGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCTGGCAAACAGAGACAGGTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp CGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGTACCATAGCCAGGCCTCAGCTCATCCCCTGCCTCTaGCATGAGCTCATGCCACCA +
Preference number: 3 (lower is better)
Translates to: RWGSAGHLPPGGTIARPQLIPCL*HELMPP
Trigger: TGGTGGCATGAGCTCATGCAAGAGGCAGGGGATGAG...CTGAGGCCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR CCA 72 bp TCCACGATGGGGCAGCGCTGGGCACCTACCACCCGGTaGTACCATAGCCAGGCCTCAGGGTTGATGGGTTCA +
Preference number: 3 (lower is better)
Translates to: STMGQRWAPTTR*YHSQASGLMGS
Trigger: TGAACCCATCAACCCTGAGGCCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR CCA 72 bp TCTGTTTGCCAGAAGGTGTCCACGATGGGGCAGCGCTaGGCACCTACCACCCGGTGGTACCATAGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: SVCQKVSTMGQR*APTTRWYHSQA
Trigger: GGCCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCTGGCAAACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp GTTTGCCAGAAGGTGTCCACGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGGATGCCCGGCTATGCTaGGTGACAGGCTCATCTCCA +
Preference number: 3 (lower is better)
Translates to: VCQKVSTMGQRWAPTTRWDARLC*VTGSSP
Trigger: TGGAGATGAGCCTGTCACCAAGCATAGCCGGGCATC...CCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCTGGCAAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp TGTCCACGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGTACCATAGCCAGGGATGCCCGGCTATGCTaGGTGACAGGCTCATCTCCA +
Preference number: 3 (lower is better)
Translates to: CPRWGSAGHLPPGGTIARDARLC*VTGSSP
Trigger: TGGAGATGAGCCTGTCACCAAGCATAGCCGGGCATC...CCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp GCCAGAAGGTGTCCACGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGTACCTCTCTAATCTGCTTCTaGAGCTCCTCGGTGAGCTTG +
Preference number: 3 (lower is better)
Translates to: ARRCPRWGSAGHLPPGGTSLICF*SSSVSL
Trigger: CAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGA...GGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp GTTTGCCAGAAGGTGTCCACGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGGGCAGTCACAGGATGTaGTCTCTACCTGGAGACAAA +
Preference number: 3 (lower is better)
Translates to: VCQKVSTMGQRWAPTTRWGSHRM*SLPGDK
Trigger: TTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCC...CCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCTGGCAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR TCA 72 bp CCTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATaGAGAGTGGGTCCTCGGCATCACACCACTCGGGCT +
Preference number: 3 (lower is better)
Translates to: PWVCLWSHWCTG*RVGPRHHTTRA
Trigger: AGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
3UTR TCA 72 bp ACCACTCGGGCTCACACTCATCCCCTGCCTCTTGCATaGGCTCATGCCACCACAAGTCAATCCCTTGGTTCC +
Preference number: 3 (lower is better)
Translates to: TTRAHTHPLPLA*AHATTSQSLGS
Trigger: GGAACCAAGGGATTGACTTGTGGTGGCATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAGCCCGAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
3UTR GCA 72 bp CTCGGCATCACACCACTCGGGCTCACACTCATCCCCTaGCTCTTGCATGAGCTCATGCCACCACAAGTCAAT +
Preference number: 3 (lower is better)
Translates to: LGITPLGLTLIP*LLHELMPPQVN
Trigger: ATTGACTTGTGGTGGCATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
3UTR GCA 72 bp TCAGGGTTGATGGGTTCACCCACTGTGCCTAACACCTaGAAGGATGCCCGGCTATGCTTGGTGACAGGCTCA +
Preference number: 3 (lower is better)
Translates to: SGLMGSPTVPNT*KDARLCLVTGS
Trigger: TGAGCCTGTCACCAAGCATAGCCGGGCATCCTTGCAGGTGTTAGGCACAGTGGGTGAACCCATCAACCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR GCA 72 bp TACCACAATGGAGTGCAAAGCCCCAATGCGGGCACATaGCAGCATGGCCACCACAAGCTCTGGGATCATAGG +
Preference number: 3 (lower is better)
Translates to: YHNGVQSPNAGT*QHGHHKLWDHR
Trigger: CCTATGATCCCAGAGCTTGTGGTGGCCATGCTGGCATGTGCCCGCATTGGGGCTTTGCACTCCATTGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480274.1
3UTR CCA 72 bp GCGTTCGTGGTTCCCATAGACTGTGCGCATGATCCCTaGCCAGGGCTGCTTGAACACCAGATAACCTTCAGC +
Preference number: 3 (lower is better)
Translates to: AFVVPIDCAHDP*PGLLEHQITFS
Trigger: GCTGAAGGTTATCTGGTGTTCAAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACGAACGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGCTACAACCACAGGGCTaGAGCCTGACTGGGGCAAGA +
Preference number: 3 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPLQPQG*SLTGAR
Trigger: TCTTGCCCCAGTCAGGCTCAAGCCCTGTGGTTGTAG...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR TCA 72 bp AGCTGCCTCTGCAACAGCCTCATGTTCCACAAGTGCTaGCTCCACCTCTGCTGTACTCAGCAGGTGTCCAGA +
Preference number: 3 (lower is better)
Translates to: SCLCNSLMFHKC*LHLCCTQQVSR
Trigger: TCTGGACACCTGCTGAGTACAGCAGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGCAGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR GCA 72 bp AAACACAATGGAGTGCAAAGCCCCAATGCGGGCACATaGCAGCATGGCCACCACAAGCTCTGGGATCATAGG +
Preference number: 3 (lower is better)
Translates to: KHNGVQSPNAGT*QHGHHKLWDHR
Trigger: CCTATGATCCCAGAGCTTGTGGTGGCCATGCTGGCATGTGCCCGCATTGGGGCTTTGCACTCCATTGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
3UTR CCA 72 bp CTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTaGAGACAAAGCTGGTTTCCGGTCCCAGACAGCTGG +
Preference number: 3 (lower is better)
Translates to: LSAWQSQDVVST*RQSWFPVPDSW
Trigger: CCAGCTGTCTGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR CCA 72 bp CCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTaGCATCTGGCACAAAAGGGAATTCAGACCCAGAAC +
Preference number: 3 (lower is better)
Translates to: PIQPLEPMGRQY*HLAQKGIQTQN
Trigger: GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp CTCTGCTGTACTCAGCAGGTGTCCAGATACATTGAGCATGTCATCAATCCTGCCACCACACCCTTGGGTTaGCCTGTGGAGCCACTGGTG +
Preference number: 3 (lower is better)
Translates to: LCCTQQVSRYIEHVINPATTPLG*PVEPLV
Trigger: CACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGGT...GGCAGGATTGATGACATGCTCAATGTATCTGGACACCTGCTGAGTACAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR CCA 72 bp CCACAATGCTCCACAGGCGGTTCACGTCCGGATATGTaGGAATCCCCTCAAACAAAACACTGGTGGCACCAT +
Preference number: 3 (lower is better)
Translates to: PQCSTGGSRPDM*ESPQTKHWWHH
Trigger: ATGGTGCCACCAGTGTTTTGTTTGAGGGGATTCCCACATATCCGGACGTGAACCGCCTGTGGAGCATTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp TTCGTGGTTCCCATAGACTGTGCGCATGATCCCTGGCCAGGGCTGCTTGAACACTTGGTCACCTTGTATTaGTCCACAATGCTCCACAGG +
Preference number: 3 (lower is better)
Translates to: FVVPIDCAHDPWPGLLEHLVTLY*STMLHR
Trigger: CCTGTGGAGCATTGTGGACAAATACAAGGTGACCAA...GTGTTCAAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR GCA 72 bp GGTGACGTAGGAATGACCAGTGATCCAACCAATGTCTaGCGTGCACCAGAACACATCCTCTGCATGGAAGTC +
Preference number: 3 (lower is better)
Translates to: GDVGMTSDPTNV*RAPEHILCMEV
Trigger: GACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTTGGATCACTGGTCATTCCTACGTCACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp GCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAAGGCAGTCACAGGATGTaGTCTCTACCTGGAGACAAA +
Preference number: 3 (lower is better)
Translates to: ANGQTVLASGTKGNSDPEGSHRM*SLPGDK
Trigger: TTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCC...TTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp CTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAATGGACTCACAAATCATaGTTTTTAAGGGCAAGTGCA +
Preference number: 3 (lower is better)
Translates to: LPIQPLEPMGRQYWHLAQWTHKS*FLRASA
Trigger: TGCACTTGCCCTTAAAAACAATGATTTGTGAGTCCA...TTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR TCA 72 bp GCCACAGTAGACATGTCCCCGAGGTCATGGTCATTCTaGGCAATCTTCCGAAGCACTCGCCTCATGATTTTC +
Preference number: 3 (lower is better)
Translates to: ATVDMSPRSWSF*AIFRSTRLMIF
Trigger: GAAAATCATGAGGCGAGTGCTTCGGAAGATTGCTCAGAATGACCATGACCTCGGGGACATGTCTACTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR CCA 72 bp AGTGGAGGCCCTCACATCCCCTTTGAACACTTAACTTaGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGG +
Preference number: 3 (lower is better)
Translates to: SGGPHIPFEHLT*VGEVAFSSLFW
Trigger: CCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGGCCTCCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAGGCAGTCACAGGATGTaGTCTCTACCTGGAGACAAA +
Preference number: 3 (lower is better)
Translates to: QWADSTGIWHKREFRPRTGSHRM*SLPGDK
Trigger: TTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCC...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR GCA 72 bp CTGTGTAGAACTTGGTCACCTTGTATTTGTCCACAATaGTCCACAGGCGGTTCACGTCCGGATATGTGGGAA +
Preference number: 3 (lower is better)
Translates to: LCRTWSPCICPQ*STGGSRPDMWE
Trigger: TTCCCACATATCCGGACGTGAACCGCCTGTGGAGCATTGTGGACAAATACAAGGTGACCAAGTTCTACACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp CTGGCAGCCATCTCCTGTAACATAGTATCCAGGAAACTTCTTAAAGTAGGTTGTCTACAACCACAGGGCTaGAGCCTGACTGGGGCAAGA +
Preference number: 3 (lower is better)
Translates to: LAAISCNIVSRKLLKVGCLQPQG*SLTGAR
Trigger: TCTTGCCCCAGTCAGGCTCAAGCCCTGTGGTTGTAG...ACAACCTACTTTAAGAAGTTTCCTGGATACTATGTTACAGGAGATGGCTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR TCA 72 bp TTGAGCCTGACTGGGGCAAGAAAACAGAGTTTCATCTaGGAATGTCTCTTATGGGCTGGGTTCTGTTCAGGG +
Preference number: 3 (lower is better)
Translates to: LSLTGARKQSFI*ECLLWAGFCSG
Trigger: CCCTGAACAGAACCCAGCCCATAAGAGACATTCTCAGATGAAACTCTGTTTTCTTGCCCCAGTCAGGCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR GCA 72 bp ATCTCCAAACTTCATGAGCAGACGGATGGCTGTGGGTaGTGTGTAGAACTTGGTCACCTTGTATTTGTCCAC +
Preference number: 3 (lower is better)
Translates to: ISKLHEQTDGCG*CVELGHLVFVH
Trigger: GTGGACAAATACAAGGTGACCAAGTTCTACACAGCACCCACAGCCATCCGTCTGCTCATGAAGTTTGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR GCA 72 bp TTCACCTTCCAACTCTTCCCCGGACTCATTCAGGATTaGAGGAGCTACACCAAAGAATGGGAAAGTAGCAGA +
Preference number: 3 (lower is better)
Translates to: FTFQLFPGLIQD*RSYTKEWESSR
Trigger: TCTGCTACTTTCCCATTCTTTGGTGTAGCTCCTGCAATCCTGAATGAGTCCGGGGAAGAGTTGGAAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR CCA 72 bp CCAATGTCTGCCGTGCACCAGAACACATCCTCTGCATaGAAGTCAAACACATACTTGAAGGTTGTGGCTACA +
Preference number: 3 (lower is better)
Translates to: PMSAVHQNTSSA*KSNTYLKVVAT
Trigger: TGTAGCCACAACCTTCAAGTATGTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCAGACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAAGGTGTCCAGATACATaGAGCATGTCATCAATCCTG +
Preference number: 3 (lower is better)
Translates to: QWADSTGIWHKREFRPRTRCPDT*SMSSIL
Trigger: CAGGATTGATGACATGCTCAATGTATCTGGACACCT...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
3UTR-3UTR CAA 90 bp ACAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAGGCAGTCACAGGATGTaGTCTCTACCTGGAGACAAA +
Preference number: 3 (lower is better)
Translates to: TRKTSSSGPRNKTHLLLQGSHRM*SLPGDK
Trigger: TTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCC...TTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR TCA 72 bp AGAACACATCCTCTGCATGGAAGTCAAACACATACTTaGAGGTTGTGGCTACATAGAGCATGTAGCCCCCAA +
Preference number: 3 (lower is better)
Translates to: RTHPLHGSQTHT*RLWLHRACSPQ
Trigger: TTGGGGGCTACATGCTCTATGTAGCCACAACCTTCAAGTATGTGTTTGACTTCCATGCAGAGGATGTGTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGTACCATAGCCAGGCCTCAGCTGAGTGGTCTCCCCTaGCTCATTGCCCTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: RWGSAGHLPPGGTIARPQLSGLP*LIALPV
Trigger: TACTGGGAGGGCAATGAGCCAGGGGAGACCACTCAG...CTGAGGCCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR TCA 90 bp GAAGAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGCCTCGCCAGGCCTCAGGGTTaGTGGGTTCACCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: EEWVLGITPLGLTLIPCLARPQG*WVHPLC
Trigger: GCACAGTGGGTGAACCCATCAACCCTGAGGCCTGGC...GAGGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCATCACACAATGCAGCGAGGGGACGTaGGCGGAGCGGCTGACCTCG +
Preference number: 4 (lower is better)
Translates to: LLLELLGELGAEGVAITQCSEGT*AERLTS
Trigger: CGAGGTCAGCCGCTCCGCGCACGTCCCCTCGCTGCA...TTGTGTGATGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000480978.5
CDS-3UTR CCA 90 bp CGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGTACCATAGCCAGGCCTCAGCAGGATCATGTTCACTaGATGGTCAGGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: RWGSAGHLPPGGTIARPQQDHVH*MVRQRW
Trigger: CCACCGCTGCCTGACCATCCAGTGAACATGATCCTG...CTGAGGCCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGTACCATAGCCAGGCCTCAGGAAGCACTCGCCTCATaGTTTTCCCTGAGCGGGTTT +
Preference number: 4 (lower is better)
Translates to: RWGSAGHLPPGGTIARPQEALAS*FSLSGF
Trigger: AAACCCGCTCAGGGAAAATCATGAGGCGAGTGCTTC...CTGAGGCCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp AACCACACCCTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATGAAGAGTGGTGCAGCGAGGGGACGTaGGCGGAGCGGCTGACCTCG +
Preference number: 4 (lower is better)
Translates to: NHTLGFACGATGVQDEEWCSEGT*AERLTS
Trigger: CGAGGTCAGCCGCTCCGCGCACGTCCCCTCGCTGCA...CCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477932.5
CDS-3UTR GCA 90 bp CTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAACCCATGCCGAGCTCTaGCCGCCCCAGGTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LPIQPLEPMGRQYWHLAQTHAEL*PPQVLD
Trigger: GTCAAGCACCTGGGGCGGGCAGAGCTCGGCATGGGT...TTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CCA 90 bp GAAGAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGCCTCGCACCTACCACCCGGTaGTACCATAGCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: EEWVLGITPLGLTLIPCLAPTTR*YHSQAS
Trigger: TGAGGCCTGGCTATGGTACCACCGGGTGGTAGGTGC...GAGGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GTCCCAGACAGCTGGTCAAGGGAGGGTAGTGTGGGTCAACACTGGCCCTCAGCAGGGAAACCCTTCTCCTaGCACTTCTGCAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VPDSWSREGSVGQHWPSAGKPFS*HFCRAS
Trigger: CGAGGCCCTGCAGAAGTGTCAGGAGAAGGGTTTCCC...TGCTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTGACCAGCTGTCTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR TCA 90 bp GGTAGTGTGGGTCAACACTGGCCCTCAGCACTCCTGAGGGGGCAAAGAGGATGGCATAGACTGTGCGCATaGTCCCTGGCCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSVGQHWPSALLRGQRGWHRLCA*SLARAA
Trigger: AGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATG...CCATCCTCTTTGCCCCCTCAGGAGTGCTGAGGGCCAGTGTTGACCCACACTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp GTACTGGGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTGCAGCGAGGGGACGTaGGCGGAGCGGCTGACCTCG +
Preference number: 4 (lower is better)
Translates to: VLGLPKRADIGLHSCLPACSEGT*AERLTS
Trigger: CGAGGTCAGCCGCTCCGCGCACGTCCCCTCGCTGCA...AGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCCCAGTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
CDS-3UTR CCA 90 bp GTCCCAGACAGCTGGTCAAGGGAGGGTAGTGTGGGTCAACACTGGCCCTCAGCAGCACCTACCACCCGGTaGTACCATAGCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: VPDSWSREGSVGQHWPSAAPTTR*YHSQAS
Trigger: TGAGGCCTGGCTATGGTACCACCGGGTGGTAGGTGC...TGCTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTGACCAGCTGTCTGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GCCTCTGCAACAGCCTCATGTTCCACAAGTGCTGACTCCACCTCTGCTGTACTCACGATGGGGCAGCGCTaGGCACCTACCACCCGGTGG +
Preference number: 4 (lower is better)
Translates to: ASATASCSTSADSTSAVLTMGQR*APTTRW
Trigger: CCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGT...GAGTACAGCAGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GCCAGAAGGTGTCCACGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGTACCGGTGTCCAGATACATTaGGCATGTCATCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: ARRCPRWGSAGHLPPGGTGVQIH*ACHQSC
Trigger: GCAGGATTGATGACATGCTCAATGTATCTGGACACC...GGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GAGCATGTAGCCCCCAACTGTGTGAACCACACCCTTGGGTTTGCCTGTGGAGCCAGTGATTCTGAGGCCTaGAGCGGGCAGCTCCCACCT +
Preference number: 4 (lower is better)
Translates to: EHVAPNCVNHTLGFACGASDSEA*SGQLPP
Trigger: AGGTGGGAGCTGCCCGCTTCAGGCCTCAGAATCACT...GGCTCCACAGGCAAACCCAAGGGTGTGGTTCACACAGTTGGGGGCTACATGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475459.6
ENST00000481284.5
CDS-3UTR GCA 90 bp GCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAATGCAGCGAGGGGACGTaGGCGGAGCGGCTGACCTCG +
Preference number: 4 (lower is better)
Translates to: ANGQTVLASGTKGNSDPECSEGT*AERLTS
Trigger: CGAGGTCAGCCGCTCCGCGCACGTCCCCTCGCTGCA...TTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
CDS-3UTR GCA 90 bp GATGAAGAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGCCCACACCCTTGGGTTTaGCTGTGGAGCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: DEEWVLGITPLGLTLIPCPHPWV*LWSHWC
Trigger: ACACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGG...GCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAGTGGCCCACCACAGCTaGCTCTGCAACAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: LPIQPLEPMGRQYWHLAQVAHHS*LCNSLM
Trigger: CATGAGGCTGTTGCAGAGGCAGCTGTGGTGGGCCAC...TTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GTCCCAGACAGCTGGTCAAGGGAGGGTAGTGTGGGTCAACACTGGCCCTCAGCACTGAGTGGTCTCCCCTaGCTCATTGCCCTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: VPDSWSREGSVGQHWPSALSGLP*LIALPV
Trigger: TACTGGGAGGGCAATGAGCCAGGGGAGACCACTCAG...TGCTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTGACCAGCTGTCTGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CCA 90 bp GAAGAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGCCTCTGTGAACCACACCCTTaGGTTTGCCTGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: EEWVLGITPLGLTLIPCLCEPHP*VCLWSH
Trigger: GTGGCTCCACAGGCAAACCCAAGGGTGTGGTTCACA...GAGGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCACGATGGGGCAGCGCTaGGCACCTACCACCCGGTGG +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPTMGQR*APTTRW
Trigger: CCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGT...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAGAAGGTGTCCACGATaGGGCAGCGCTGGGCACCTA +
Preference number: 4 (lower is better)
Translates to: LPIQPLEPMGRQYWHLAQRRCPR*GSAGHL
Trigger: TAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCT...TTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CAGCTGCCTCTGCAACAGCCTCATGTTCCACAAGTGCTGACTCCACCTCTGCTGCATAGACTGTGCGCATaGTCCCTGGCCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QLPLQQPHVPQVLTPPLLHRLCA*SLARAA
Trigger: AGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATG...CAGCAGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGCAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CAGAAGGTGTCCACGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGTACCATATGTTCCACAAGTGCTaGCTCCACCTCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: QKVSTMGQRWAPTTRWYHMFHKC*LHLCCT
Trigger: AGTACAGCAGAGGTGGAGTCAGCACTTGTGGAACAT...ATGGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp AAAGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACCACAGCTGCTCACCCTTCACAGGATaGGGGTGGCCCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: KAVEAFTLHRMRVAHHSCSPFTG*GWPTTA
Trigger: AGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGA...GCAGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCATCACACAATCACCCTTCACAGGATaGGGGTGGCCCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: LLLELLGELGAEGVAITQSPFTG*GWPTTA
Trigger: AGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGA...TTGTGTGATGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCTGGTGGAGTCACCCATaGCGAGCTCTGCCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPWWSHP*RALPAP
Trigger: TGGGGCGGGCAGAGCTCGGCATGGGTGACTCCACCA...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp GCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACCACAGCTGCCTCACTGTGCCTAACACCTaGAAGGATGCCCGGCTATGC +
Preference number: 4 (lower is better)
Translates to: AVEAFTLHRMRVAHHSCLTVPNT*KDARLC
Trigger: GCATAGCCGGGCATCCTTGCAGGTGTTAGGCACAGT...GAGGCAGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp AAAGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACCACAGCTGCACACAGCTGCCTCCCTaGTTCAGTGGAGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: KAVEAFTLHRMRVAHHSCTQLPP*FSGGPH
Trigger: GTGAGGGCCTCCACTGAAGCAGGGAGGCAGCTGTGT...GCAGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GATGAAGAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGCCCTTGGGTTTGCCTGTaGAGCCACTGGTGTACAGGA +
Preference number: 4 (lower is better)
Translates to: DEEWVLGITPLGLTLIPCPWVCL*SHWCTG
Trigger: TCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGG...GCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GTCCCAGACAGCTGGTCAAGGGAGGGTAGTGTGGGTCAACACTGGCCCTCAGCATGTGAACCACACCCTTaGGTTTGCCTGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VPDSWSREGSVGQHWPSACEPHP*VCLWSH
Trigger: GTGGCTCCACAGGCAAACCCAAGGGTGTGGTTCACA...TGCTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTGACCAGCTGTCTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACACGATGGGGCAGCGCTaGGCACCTACCACCCGGTGG +
Preference number: 4 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNTMGQR*APTTRW
Trigger: CCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGT...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACACGGGTTTCATGGGTGTaGCACCAGGAAGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SAHTAPGANGQTVLASGTRVSWV*HQEGES
Trigger: TGACTCCCCTTCCTGGTGCCACACCCATGAAACCCG...TGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATGAAGAGTGGGTCCTCGGCCGGGTTTCATGGGTGTaGCACCAGGAAGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LGFACGATGVQDEEWVLGRVSWV*HQEGES
Trigger: TGACTCCCCTTCCTGGTGCCACACCCATGAAACCCG...GCCGAGGACCCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GTCCCAGACAGCTGGTCAAGGGAGGGTAGTGTGGGTCAACACTGGCCCTCAGCACAGGATCATGTTCACTaGATGGTCAGGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VPDSWSREGSVGQHWPSAQDHVH*MVRQRW
Trigger: CCACCGCTGCCTGACCATCCAGTGAACATGATCCTG...TGCTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTGACCAGCTGTCTGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp ACCACACCCTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATGAAGAGTGGGGCCTCCCTGCTTCAGTaGAGGCCCTCACATCCCCTT +
Preference number: 4 (lower is better)
Translates to: TTPLGLPVEPLVYRMKSGASLLQ*RPSHPL
Trigger: AAGGGGATGTGAGGGCCTCCACTGAAGCAGGGAGGC...CCCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GCTGCCTCTGCAACAGCCTCATGTTCCACAAGTGCTGACTCCACCTCTGCTGTAGGGAAACCCTTCTCCTaGCACTTCTGCAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: AASATASCSTSADSTSAVGKPFS*HFCRAS
Trigger: CGAGGCCCTGCAGAAGTGTCAGGAGAAGGGTTTCCC...TACAGCAGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR TCA 90 bp TGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAACCCGCCCCAGGTGCTTaGCCACAATGCAGCATCTTA +
Preference number: 4 (lower is better)
Translates to: CPYSPWSQWADSTGIWHKPAPGA*PQCSIL
Trigger: TAAGATGCTGCATTGTGGTCAAGCACCTGGGGCGGG...TTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR TCA 90 bp CTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCATCACACAAGGTCCCGCCCCAGGTGCTTaGCCACAATGCAGCATCTTA +
Preference number: 4 (lower is better)
Translates to: LLELLGELGAEGVAITQGPAPGA*PQCSIL
Trigger: TAAGATGCTGCATTGTGGTCAAGCACCTGGGGCGGG...ACCTTGTGTGATGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR TCA 90 bp GAGCTCTGCCCGCCCCAGGTGCTTGACCACAATGCAGCATCTTACTGGGAAACCCCCGGCTATGCTTGGTaGCAGGCTCATCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: ELCPPQVLDHNAASYWETPGYAW*QAHLQT
Trigger: AGTTTGGAGATGAGCCTGTCACCAAGCATAGCCGGG...GGTTTCCCAGTAAGATGCTGCATTGTGGTCAAGCACCTGGGGCGGGCAGAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR TCA 90 bp TGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCAGCCAGGCCTCAGGGTTaGTGGGTTCACCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: WQSQDVVSTWRQSWFPVPARPQG*WVHPLC
Trigger: GCACAGTGGGTGAACCCATCAACCCTGAGGCCTGGC...TGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCATAGACTGTGCGCATaGTCCCTGGCCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: QPLEPMGRQYWHLAQKGIHRLCA*SLARAA
Trigger: AGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATG...AATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GGTAGTGTGGGTCAACACTGGCCCTCAGCACTCCTGAGGGGGCAAAGAGGATGGGAAGCACTCGCCTCATaGTTTTCCCTGAGCGGGTTT +
Preference number: 4 (lower is better)
Translates to: GSVGQHWPSALLRGQRGWEALAS*FSLSGF
Trigger: AAACCCGCTCAGGGAAAATCATGAGGCGAGTGCTTC...CCATCCTCTTTGCCCCCTCAGGAGTGCTGAGGGCCAGTGTTGACCCACACTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACACGGTGGCTGAAGAGGTaGCTGATGACAGATGGGTCA +
Preference number: 4 (lower is better)
Translates to: SAHTAPGANGQTVLASGTRWLKR*LMTDGS
Trigger: TGACCCATCTGTCATCAGTCACCTCTTCAGCCACCG...TGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAATACCCTCTGGAGACTaGATCTGCCCATACAGCCCC +
Preference number: 4 (lower is better)
Translates to: LPIQPLEPMGRQYWHLAQIPSGD*ICPYSP
Trigger: GGGGCTGTATGGGCAGATTCAGTCTCCAGAGGGTAT...TTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TGTCCACGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGTACCATAGCCAGGCTTCAAAGAAGCAGATaGTCTGAATACCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: CPRWGSAGHLPPGGTIARLQRSR*SEYPLE
Trigger: CTCCAGAGGGTATTCAGATCATCTGCTTCTTTGAAG...CCTGGCTATGGTACCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCCTACACAGGCCTTGTaGCCCCATCTAGCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QPLEPMGRQYWHLAQKGIPTQAL*PHLAQP
Trigger: AGGCTGGGCTAGATGGGGTCACAAGGCCTGTGTAGG...AATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR GCA 90 bp GCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACCACAGCTGCCTCGCAAACACAATGGAGTaGAAAGCCCCAATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: AVEAFTLHRMRVAHHSCLANTME*KAPMRA
Trigger: TGCCCGCATTGGGGCTTTGCACTCCATTGTGTTTGC...GAGGCAGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR GCA 90 bp GCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAAACCCATGCCGAGCTCTaGCCGCCCCAGGTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: ANGQTVLASGTKGNSDPETHAEL*PPQVLD
Trigger: GTCAAGCACCTGGGGCGGGCAGAGCTCGGCATGGGT...TTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CCA 90 bp TCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACACCTTGGGTTTGCCTGTaGAGCCACTGGTGTACAGGA +
Preference number: 4 (lower is better)
Translates to: SAHTAPGANGQTVLASGTPWVCL*SHWCTG
Trigger: TCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGG...TGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGCACCATTGGCCAGTaGCCCATAGGTGACGTAGGA +
Preference number: 4 (lower is better)
Translates to: PIQPLEPMGRQYWHLAQKGTIGQ*PIGDVG
Trigger: TCCTACGTCACCTATGGGCCACTGGCCAATGGTGCC...CTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GAGCATGTAGCCCCCAACTGTGTGAACCACACCCTTGGGTTTGCCTGTGGAGCCGCAGACGGATGGCTGTaGGTGCTGTGTAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: EHVAPNCVNHTLGFACGAADGWL*VLCRTW
Trigger: CCAAGTTCTACACAGCACCCACAGCCATCCGTCTGC...GGCTCCACAGGCAAACCCAAGGGTGTGGTTCACACAGTTGGGGGCTACATGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GCTGCCTCTGCAACAGCCTCATGTTCCACAAGTGCTGACTCCACCTCTGCTGTAGCACCTACCACCCGGTaGTACCATAGCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: AASATASCSTSADSTSAVAPTTR*YHSQAS
Trigger: TGAGGCCTGGCTATGGTACCACCGGGTGGTAGGTGC...TACAGCAGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AAAGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACCACAGCTGCCAGAACCGGGTTTCATaGGTGTGGCACCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: KAVEAFTLHRMRVAHHSCQNRVS*VWHQEG
Trigger: CCCTTCCTGGTGCCACACCCATGAAACCCGGTTCTG...GCAGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GTCCCAGACAGCTGGTCAAGGGAGGGTAGTGTGGGTCAACACTGGCCCTCAGCATTGGGGCTGAAGGTGTaGCCATCACACAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: VPDSWSREGSVGQHWPSALGLKV*PSHKVT
Trigger: TGTCACCTTGTGTGATGGCCACACCTTCAGCCCCAA...TGCTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTGACCAGCTGTCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GCGTTCGTGGTTCCCATAGACTGTGCGCATGATCCCTGGCCAGGGCTGCTTGAACAGGATCATGTTCACTaGATGGTCAGGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: AFVVPIDCAHDPWPGLLEQDHVH*MVRQRW
Trigger: CCACCGCTGCCTGACCATCCAGTGAACATGATCCTG...TTCAAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACGAACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTCGTGGTTCCCATAGACTGTGCGCATGATCCCTGGCCAGGGCTGCTTGAACACAGACTGAGGCTGACCTaGGCCCTGTCCTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FVVPIDCAHDPWPGLLEHRLRLT*ALSFLP
Trigger: AGGCAGAAAGGACAGGGCCCAGGTCAGCCTCAGTCT...GTGTTCAAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATGCCTCCCTGCTTCAGTaGAGGCCCTCACATCCCCTT +
Preference number: 4 (lower is better)
Translates to: RLNLPIQPLEPMGRQYWHASLLQ*RPSHPL
Trigger: AAGGGGATGTGAGGGCCTCCACTGAAGCAGGGAGGC...ATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GTCCCAGACAGCTGGTCAAGGGAGGGTAGTGTGGGTCAACACTGGCCCTCAGCAATGTCTCTTATGGGCTaGGTTCTGTTCAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: VPDSWSREGSVGQHWPSAMSLMG*VLFRGG
Trigger: CCCTCCCCTGAACAGAACCCAGCCCATAAGAGACAT...TGCTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTGACCAGCTGTCTGGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCGGGTTTCATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGGCCACCTGTCATGTCTCTTATGGGCTaGGTTCTGTTCAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: PGFMGVAPGRGVNMWPPVMSLMG*VLFRGG
Trigger: CCCTCCCCTGAACAGAACCCAGCCCATAAGAGACAT...GACAGGTGGCCACATGTTGACTCCCCTTCCTGGTGCCACACCCATGAAACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GAAGAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGCCTCGGGCTTGAGCCTGACTaGGGCAAGAAAACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: EEWVLGITPLGLTLIPCLGLEPD*GKKTEF
Trigger: AAACTCTGTTTTCTTGCCCCAGTCAGGCTCAAGCCC...GAGGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGCACTGGTGTACAGGATaGAGAGTGGGTCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: PIQPLEPMGRQYWHLAQKHWCTG*RVGPRH
Trigger: ATGCCGAGGACCCACTCTTCATCCTGTACACCAGTG...CTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GTCCCAGACAGCTGGTCAAGGGAGGGTAGTGTGGGTCAACACTGGCCCTCAGCAATGTTCCACAAGTGCTaGCTCCACCTCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: VPDSWSREGSVGQHWPSAMFHKC*LHLCCT
Trigger: AGTACAGCAGAGGTGGAGTCAGCACTTGTGGAACAT...TGCTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTGACCAGCTGTCTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCATCACCCTTCACAGGATaGGGGTGGCCCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: GANGQTVLASGTKGNSDPSPFTG*GWPTTA
Trigger: AGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGA...TGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAATACCCTCTGGAGACTaGATCTGCCCATACAGCCCC +
Preference number: 4 (lower is better)
Translates to: CPYSPWSQWADSTGIWHKIPSGD*ICPYSP
Trigger: GGGGCTGTATGGGCAGATTCAGTCTCCAGAGGGTAT...TTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCCAATGCGGGCACATaGCAGCATGGCCACCACAAG +
Preference number: 4 (lower is better)
Translates to: PGANGQTVLASGTKGNSDPNAGT*QHGHHK
Trigger: CTTGTGGTGGCCATGCTGGCATGTGCCCGCATTGGG...GTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp AGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATTCTGCCCGCCCCAGGTaGTTGACCACAATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: RLNLPIQPLEPMGRQYWHSARPR*LTTMQH
Trigger: ATGCTGCATTGTGGTCAAGCACCTGGGGCGGGCAGA...ATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp CAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTTCTGCCCGCCCCAGGTaGTTGACCACAATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QPLEPMGRQYWHLAQKGISARPR*LTTMQH
Trigger: ATGCTGCATTGTGGTCAAGCACCTGGGGCGGGCAGA...AATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp GATAACCTTCAGCTTCACCTTCCAACTCTTCCCCGGACTCATTCAGGATTGCAGTGGTGGAGTCACCCATaGCGAGCTCTGCCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: DNLQLHLPTLPRTHSGLQWWSHP*RALPAP
Trigger: TGGGGCGGGCAGAGCTCGGCATGGGTGACTCCACCA...CTGCAATCCTGAATGAGTCCGGGGAAGAGTTGGAAGGTGAAGCTGAAGGTTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR GCA 90 bp TCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACACTCACACTCATCCCCTaGCTCTTGCATGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: SAHTAPGANGQTVLASGTLTLIP*LLHELM
Trigger: CATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAG...TGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CCTCTGGAGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTAACTGTGCCTAACACCTaGAAGGATGCCCGGCTATGC +
Preference number: 4 (lower is better)
Translates to: PLETESAHTAPGANGQTVTVPNT*KDARLC
Trigger: GCATAGCCGGGCATCCTTGCAGGTGTTAGGCACAGT...TACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCTCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAACTGTGCCTAACACCTaGAAGGATGCCCGGCTATGC +
Preference number: 4 (lower is better)
Translates to: CPYSPWSQWADSTGIWHKTVPNT*KDARLC
Trigger: GCATAGCCGGGCATCCTTGCAGGTGTTAGGCACAGT...TTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTGGCCCACCACAGCTaGCTCTGCAACAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPVAHHS*LCNSLM
Trigger: CATGAGGCTGTTGCAGAGGCAGCTGTGGTGGGCCAC...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCACACAGCTGCCTCCCTaGTTCAGTGGAGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPTQLPP*FSGGPH
Trigger: GTGAGGGCCTCCACTGAAGCAGGGAGGCAGCTGTGT...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGCCTCTTGCATGAGCGGCCACCACAAGCTCTaGGATCATAGGCATGTAGAT +
Preference number: 4 (lower is better)
Translates to: SSASHHSGSHSSPASCMSGHHKL*DHRHVD
Trigger: ATCTACATGCCTATGATCCCAGAGCTTGTGGTGGCC...GCTCATGCAAGAGGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR CCA 90 bp GTACTGGGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTGGGCACATGCCAGCATaGCCACCACAAGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: VLGLPKRADIGLHSCLPAGHMPA*PPQALG
Trigger: TCCCAGAGCTTGTGGTGGCCATGCTGGCATGTGCCC...AGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCCCAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CCA 90 bp CCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGTGTGAACCACACCCTTaGGTTTGCCTGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PIQPLEPMGRQYWHLAQKCEPHP*VCLWSH
Trigger: GTGGCTCCACAGGCAAACCCAAGGGTGTGGTTCACA...CTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp ATGAAGAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGCCCCTCAAACAAAACACTaGTGGCACCATTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: MKSGSSASHHSGSHSSPAPQTKH*WHHWPV
Trigger: CACTGGCCAATGGTGCCACCAGTGTTTTGTTTGAGG...GGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTCTGCAGTCTGGAAGAAGGTGTCCACGATaGGGCAGCGCTGGGCACCTA +
Preference number: 4 (lower is better)
Translates to: GEVAFSSLFWVLRALQSGRRCPR*GSAGHL
Trigger: TAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCT...TCCAGACTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAAGGTGACAAAGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACCAGAACCGGGTTTCATaGGTGTGGCACCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: QGDKAVEAFTLHRMRVAHQNRVS*VWHQEG
Trigger: CCCTTCCTGGTGCCACACCCATGAAACCCGGTTCTG...GTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCTTTGTCACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCCATCCTGGTCCCGCTaGCAGCCATCTCCTGTAACA +
Preference number: 4 (lower is better)
Translates to: RLNLPIQPLEPMGRQYWHPSWSR*QPSPVT
Trigger: TGTTACAGGAGATGGCTGCCAGCGGGACCAGGATGG...ATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GCTGCCTCTGCAACAGCCTCATGTTCCACAAGTGCTGACTCCACCTCTGCTGTACCATCCTGGTCCCGCTaGCAGCCATCTCCTGTAACA +
Preference number: 4 (lower is better)
Translates to: AASATASCSTSADSTSAVPSWSR*QPSPVT
Trigger: TGTTACAGGAGATGGCTGCCAGCGGGACCAGGATGG...TACAGCAGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCGGGTTTCATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGGCCACCTGTCAGGATGGGCAAAGTTTaGAGCAGGAGGAATCCTAGG +
Preference number: 4 (lower is better)
Translates to: PGFMGVAPGRGVNMWPPVRMGKV*SRRNPR
Trigger: CCTAGGATTCCTCCTGCTCCAAACTTTGCCCATCCT...GACAGGTGGCCACATGTTGACTCCCCTTCCTGGTGCCACACCCATGAAACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAAGGGAGGGTAGTGTaGGTCAACACTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QPLEPMGRQYWHLAQKGIQGRVV*VNTGPQ
Trigger: CTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTG...AATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCCCGGTCCCAGACAGCTaGTCAAGGGAGGGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPPVPDS*SREGSV
Trigger: CACACTACCCTCCCTTGACCAGCTGTCTGGGACCGG...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GTACTGGGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTCCGGTCCCAGACAGCTaGTCAAGGGAGGGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: VLGLPKRADIGLHSCLPAPVPDS*SREGSV
Trigger: CACACTACCCTCCCTTGACCAGCTGTCTGGGACCGG...AGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCCCAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCTCTGGAGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTAACCTGGAGACAAAGCTaGTTTCCGGTCCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: PLETESAHTAPGANGQTVTWRQS*FPVPDS
Trigger: GCTGTCTGGGACCGGAAACCAGCTTTGTCTCCAGGT...TACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCTCCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCATCACACAAGGTACCTGGAGACAAAGCTaGTTTCCGGTCCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: LLELLGELGAEGVAITQGTWRQS*FPVPDS
Trigger: GCTGTCTGGGACCGGAAACCAGCTTTGTCTCCAGGT...ACCTTGTGTGATGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AAAGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACCACAGCTGCACCTGGAGACAAAGCTaGTTTCCGGTCCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: KAVEAFTLHRMRVAHHSCTWRQS*FPVPDS
Trigger: GCTGTCTGGGACCGGAAACCAGCTTTGTCTCCAGGT...GCAGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGTTTTAGGCAAGCCAGGTGCATTCTGGATGTAGTCTGGTGTGGCAATGGGGCCTGCCCATACAGCCCCTaGAGCCAATGGGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: GFRQARCILDVVWCGNGACPYSP*SQWADS
Trigger: ACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA...GGCCCCATTGCCACACCAGACTACATCCAGAATGCACCTGGCTTGCCTAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAGAAGCTGATGGTATGTaGTCTGAGTGGTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: CPYSPWSQWADSTGIWHKEADGM*SEWSPL
Trigger: CAGGGGAGACCACTCAGATCACATACCATCAGCTTC...TTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR TCA 90 bp GGTAGTGTGGGTCAACACTGGCCCTCAGCACTCCTGAGGGGGCAAAGAGGATGGTTCGGAGAACATTGCTaGACTGACACACTTGGACCA +
Preference number: 4 (lower is better)
Translates to: GSVGQHWPSALLRGQRGWFGEHC*TDTLGP
Trigger: TGGTCCAAGTGTGTCAGTTCAGCAATGTTCTCCGAA...CCATCCTCTTTGCCCCCTCAGGAGTGCTGAGGGCCAGTGTTGACCCACACTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR TCA 90 bp TGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCACCCGCCCCAGGTGCTTaGCCACAATGCAGCATCTTA +
Preference number: 4 (lower is better)
Translates to: WQSQDVVSTWRQSWFPVPPAPGA*PQCSIL
Trigger: TAAGATGCTGCATTGTGGTCAAGCACCTGGGGCGGG...TGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR TCA 90 bp GTGACTGATGACAGATGGGTCAGCCACAGTAGACATGTCCCCGAGGTCATGGTCCACTGGTGTACAGGATaGAGAGTGGGTCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: VTDDRWVSHSRHVPEVMVHWCTG*RVGPRH
Trigger: ATGCCGAGGACCCACTCTTCATCCTGTACACCAGTG...GACCATGACCTCGGGGACATGTCTACTGTGGCTGACCCATCTGTCATCAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCATCACACAAGGTGACACGTAGGAATGACCAGTaGTCCAACCAATGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: LSSSVSLGLKVWPSHKVTRRNDQ*SNQCLP
Trigger: CGGCAGACATTGGTTGGATCACTGGTCATTCCTACG...TGTCACCTTGTGTGATGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CACACCCTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATGAAGAGTGGGTCCATCTCCAAACTTCATaGGCAGACGGATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: HTLGFACGATGVQDEEWVHLQTS*ADGWLW
Trigger: CCACAGCCATCCGTCTGCTCATGAAGTTTGGAGATG...GACCCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCCCGGCTATGCTTGGTaGCAGGCTCATCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: PGSHRMLSLPGDKAGFRSPGYAW*QAHLQT
Trigger: AGTTTGGAGATGAGCCTGTCACCAAGCATAGCCGGG...GGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TACACCAAAGAATGGGAAAGTAGCAGAACCGGGTTTCATGGGTGTGGCACCAGGCATAGACTGTGCGCATaGTCCCTGGCCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: YTKEWESSRTGFHGCGTRHRLCA*SLARAA
Trigger: AGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATG...CCTGGTGCCACACCCATGAAACCCGGTTCTGCTACTTTCCCATTCTTTGGTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GTCCCAGACAGCTGGTCAAGGGAGGGTAGTGTGGGTCAACACTGGCCCTCAGCAAGGTCATGGTCATTCTaGGCAATCTTCCGAAGCACT +
Preference number: 4 (lower is better)
Translates to: VPDSWSREGSVGQHWPSARSWSF*AIFRST
Trigger: AGTGCTTCGGAAGATTGCTCAGAATGACCATGACCT...TGCTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTGACCAGCTGTCTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCGGTGGCTGAAGAGGTaGCTGATGACAGATGGGTCA +
Preference number: 4 (lower is better)
Translates to: QPLEPMGRQYWHLAQKGIRWLKR*LMTDGS
Trigger: TGACCCATCTGTCATCAGTCACCTCTTCAGCCACCG...AATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GTTTGCCAGAAGGTGTCCACGATGGGGCAGCGCTGGGCACCTACCACCCGGTGGAAACAGAGTTTCATCTaGGAATGTCTCTTATGGGCT +
Preference number: 4 (lower is better)
Translates to: VCQKVSTMGQRWAPTTRWKQSFI*ECLLWA
Trigger: AGCCCATAAGAGACATTCTCAGATGAAACTCTGTTT...CCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCTGGCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACCCCAATGCGGGCACATaGCAGCATGGCCACCACAAG +
Preference number: 4 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNPNAGT*QHGHHK
Trigger: CTTGTGGTGGCCATGCTGGCATGTGCCCGCATTGGG...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp GTACTGGGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTAGTGCAAAGCCCCAATaGGGGCACATGCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: VLGLPKRADIGLHSCLPASAKPQ*GHMPAW
Trigger: CCATGCTGGCATGTGCCCGCATTGGGGCTTTGCACT...AGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCCCAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp TGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCAAGTGCAAAGCCCCAATaGGGGCACATGCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: WQSQDVVSTWRQSWFPVPSAKPQ*GHMPAW
Trigger: CCATGCTGGCATGTGCCCGCATTGGGGCTTTGCACT...TGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp CTGAATGCCCTGTTTTCGGAGAACATTGCTGAACTGACACACTTGGACCAGAAGACCCATGCCGAGCTCTaGCCGCCCCAGGTGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LNALFSENIAELTHLDQKTHAEL*PPQVLD
Trigger: GTCAAGCACCTGGGGCGGGCAGAGCTCGGCATGGGT...CTTCTGGTCCAAGTGTGTCAGTTCAGCAATGTTCTCCGAAAACAGGGCATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR GCA 90 bp ACCACACCCTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATGAAGAGTGGGCTCACACTCATCCCCTaGCTCTTGCATGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: TTPLGLPVEPLVYRMKSGLTLIP*LLHELM
Trigger: CATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAG...CCCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCCCACACCCTTGGGTTTaGCTGTGGAGCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPPHPWV*LWSHWC
Trigger: ACACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGG...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAACCAATGTCTGCCGTaGACCAGAACACATCCTCTG +
Preference number: 4 (lower is better)
Translates to: SAHTAPGANGQTVLASGTNQCLP*TRTHPL
Trigger: CAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTT...TGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCATCACACAAGGTGAAGGATGCCCGGCTATaGTTGGTGACAGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: FLSSSVSLGLKVWPSHKVKDARL*LVTGSS
Trigger: AGATGAGCCTGTCACCAAGCATAGCCGGGCATCCTT...CACCTTGTGTGATGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TTCGTGGTTCCCATAGACTGTGCGCATGATCCCTGGCCAGGGCTGCTTGAACACTGGGTTCACCCACTGTaGCTAACACCTGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: FVVPIDCAHDPWPGLLEHWVHPL*LTPARM
Trigger: CATCCTTGCAGGTGTTAGGCACAGTGGGTGAACCCA...GTGTTCAAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CTTTTCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGTGGCCCACCACAGCTaGCTCTGCAACAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: LFSNLLLELLGELGAEGVVAHHS*LCNSLM
Trigger: CATGAGGCTGTTGCAGAGGCAGCTGTGGTGGGCCAC...CACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR GCA 90 bp GTCCCAGACAGCTGGTCAAGGGAGGGTAGTGTGGGTCAACACTGGCCCTCAGCATTTAGGCAAGCCAGGTaGATTCTGGATGTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: VPDSWSREGSVGQHWPSAFRQAR*ILDVVW
Trigger: CCAGACTACATCCAGAATGCACCTGGCTTGCCTAAA...TGCTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTGACCAGCTGTCTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TTGTGGCTACATAGAGCATGTAGCCCCCAACTGTGTGAACCACACCCTTGGGTTACACAGCTGCCTCCCTaGTTCAGTGGAGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LWLHRACSPQLCEPHPWVTQLPP*FSGGPH
Trigger: GTGAGGGCCTCCACTGAAGCAGGGAGGCAGCTGTGT...AACCCAAGGGTGTGGTTCACACAGTTGGGGGCTACATGCTCTATGTAGCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp ACACCCTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATGAAGAGTGGGTCCGTTGTACCGAAGGAATaGGCCAGGGCATGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: TPLGLPVEPLVYRMKSGSVVPKE*ARAWSL
Trigger: AAGACTCCATGCCCTGGCCCATTCCTTCGGTACAAC...GGACCCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAGGCCACCACAAGCTCTaGGATCATAGGCATGTAGAT +
Preference number: 4 (lower is better)
Translates to: SAHTAPGANGQTVLASGTGHHKL*DHRHVD
Trigger: ATCTACATGCCTATGATCCCAGAGCTTGTGGTGGCC...TGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CCA 90 bp TCCTACCACAATGGAGTGCAAAGCCCCAATGCGGGCACATGCCAGCATGGCCACGGCCACCACAAGCTCTaGGATCATAGGCATGTAGAT +
Preference number: 4 (lower is better)
Translates to: SYHNGVQSPNAGTCQHGHGHHKL*DHRHVD
Trigger: ATCTACATGCCTATGATCCCAGAGCTTGTGGTGGCC...GTGGCCATGCTGGCATGTGCCCGCATTGGGGCTTTGCACTCCATTGTGGTAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480274.1
CDS-3UTR CCA 90 bp CTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAGCCTGCAAACACAATaGAGTGCAAAGCCCCAATGC +
Preference number: 4 (lower is better)
Translates to: LPIQPLEPMGRQYWHLAQSLQTQ*SAKPQC
Trigger: GCATTGGGGCTTTGCACTCCATTGTGTTTGCAGGCT...TTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CCA 90 bp GCCCGCCCCAGGTGCTTGACCACAATGCAGCATCTTACTGGGAAACCCTTCTCCAGCCTGCAAACACAATaGAGTGCAAAGCCCCAATGC +
Preference number: 4 (lower is better)
Translates to: ARPRCLTTMQHLTGKPFSSLQTQ*SAKPQC
Trigger: GCATTGGGGCTTTGCACTCCATTGTGTTTGCAGGCT...GGAGAAGGGTTTCCCAGTAAGATGCTGCATTGTGGTCAAGCACCTGGGGCGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR CCA 90 bp ACCACAGCTGCCTCTGCAACAGCCTCATGTTCCACAAGTGCTGACTCCACCTCTCCTTGGGTTTGCCTGTaGAGCCACTGGTGTACAGGA +
Preference number: 4 (lower is better)
Translates to: TTAASATASCSTSADSTSPWVCL*SHWCTG
Trigger: TCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGG...AGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGCAGCTGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTCTGCAGTCTGGAGGCACCATTGGCCAGTaGCCCATAGGTGACGTAGGA +
Preference number: 4 (lower is better)
Translates to: GEVAFSSLFWVLRALQSGGTIGQ*PIGDVG
Trigger: TCCTACGTCACCTATGGGCCACTGGCCAATGGTGCC...TCCAGACTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTGCAGACGGATGGCTGTaGGTGCTGTGTAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: QPLEPMGRQYWHLAQKGIADGWL*VLCRTW
Trigger: CCAAGTTCTACACAGCACCCACAGCCATCCGTCTGC...AATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TCCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTGCACCTACCACCCGGTaGTACCATAGCCAGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SFLPGSHRMLSLPGDKAGAPTTR*YHSQAS
Trigger: TGAGGCCTGGCTATGGTACCACCGGGTGGTAGGTGC...ACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAGAAGGTGTCCACGATaGGGCAGCGCTGGGCACCTA +
Preference number: 4 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNRRCPR*GSAGHL
Trigger: TAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCT...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGCGGGTTTCATGGGTGTaGCACCAGGAAGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPRVSWV*HQEGES
Trigger: TGACTCCCCTTCCTGGTGCCACACCCATGAAACCCG...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTCAGTGCAGAACCGGGTTTCATaGGTGTGGCACCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GLPKRADIGLHSCLPASVQNRVS*VWHQEG
Trigger: CCCTTCCTGGTGCCACACCCATGAAACCCGGTTCTG...CACTGAAGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTCTGCAGTCTGGACAGAACCGGGTTTCATaGGTGTGGCACCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GEVAFSSLFWVLRALQSGQNRVS*VWHQEG
Trigger: CCCTTCCTGGTGCCACACCCATGAAACCCGGTTCTG...TCCAGACTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCCCATCCTGGTCCCGCTaGCAGCCATCTCCTGTAACA +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPPSWSR*QPSPVT
Trigger: TGTTACAGGAGATGGCTGCCAGCGGGACCAGGATGG...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GTACTGGGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTCAAGGGAGGGTAGTGTaGGTCAACACTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: VLGLPKRADIGLHSCLPAQGRVV*VNTGPQ
Trigger: CTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTG...AGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCCCAGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GTCCCAGACAGCTGGTCAAGGGAGGGTAGTGTGGGTCAACACTGGCCCTCAGCAGATGTTGTCTCTACCTaGAGACAAAGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: VPDSWSREGSVGQHWPSADVVST*RQSWFP
Trigger: CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATC...TGCTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTGACCAGCTGTCTGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTCAGTGAGACTGAGGCTGACCTaGGCCCTGTCCTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GLPKRADIGLHSCLPASVRLRLT*ALSFLP
Trigger: AGGCAGAAAGGACAGGGCCCAGGTCAGCCTCAGTCT...CACTGAAGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCAAGCCCCTGGAGCCAATaGGCAGACAGTACTGGCATC +
Preference number: 4 (lower is better)
Translates to: WQSQDVVSTWRQSWFPVPSPWSQ*ADSTGI
Trigger: GATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCT...TGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
3UTR CAA 72 bp ATCACACCACTCGGGCTCACACTCATCCCCTGCCTCTaGCATGAGCTCATGCCACCACAAGTCAATCCCTTG +
Preference number: 4 (lower is better)
Translates to: ITPLGLTLIPCL*HELMPPQVNPL
Trigger: CAAGGGATTGACTTGTGGTGGCATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTCTGCAGTCTGGACACTGGTGTACAGGATaGAGAGTGGGTCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: GEVAFSSLFWVLRALQSGHWCTG*RVGPRH
Trigger: ATGCCGAGGACCCACTCTTCATCCTGTACACCAGTG...TCCAGACTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp AGGCATGTAGATGGCCACTCGGTCCCCCTTCTGAATGCCCTGTTTTCGGAGAACCGTAGGAATGACCAGTaGTCCAACCAATGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: RHVDGHSVPLLNALFSENRRNDQ*SNQCLP
Trigger: CGGCAGACATTGGTTGGATCACTGGTCATTCCTACG...GTTCTCCGAAAACAGGGCATTCAGAAGGGGGACCGAGTGGCCATCTACATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR TCA 90 bp TGCCGTGCACCAGAACACATCCTCTGCATGGAAGTCAAACACATACTTGAAGGTGCCAGGCCTCAGGGTTaGTGGGTTCACCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: CRAPEHILCMEVKHILEGARPQG*WVHPLC
Trigger: GCACAGTGGGTGAACCCATCAACCCTGAGGCCTGGC...ACCTTCAAGTATGTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACACATCAATCCTGCCAGTaGTCCAGTAATAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: SAHTAPGANGQTVLASGTHQSCQ*SSNSHP
Trigger: AGGATGGCTATTACTGGATCACTGGCAGGATTGATG...TGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CCTCTGGAGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTAATGTTCCACAAGTGCTaGCTCCACCTCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: PLETESAHTAPGANGQTVMFHKC*LHLCCT
Trigger: AGTACAGCAGAGGTGGAGTCAGCACTTGTGGAACAT...TACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCTCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCATCACACAAGGTATGTTCCACAAGTGCTaGCTCCACCTCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: LLELLGELGAEGVAITQGMFHKC*LHLCCT
Trigger: AGTACAGCAGAGGTGGAGTCAGCACTTGTGGAACAT...ACCTTGTGTGATGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR TCA 90 bp AGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCGAAGCACTCGCCTCATaGTTTTCCCTGAGCGGGTTT +
Preference number: 4 (lower is better)
Translates to: SPWSQWADSTGIWHKREFEALAS*FSLSGF
Trigger: AAACCCGCTCAGGGAAAATCATGAGGCGAGTGCTTC...GAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAACCCTCACATCCCCTTTaGACACTTAACTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: CPYSPWSQWADSTGIWHKPSHPL*TLNLGR
Trigger: CCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGG...TTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTCAGTGATACCCTCTGGAGACTaGATCTGCCCATACAGCCCC +
Preference number: 4 (lower is better)
Translates to: GLPKRADIGLHSCLPASVIPSGD*ICPYSP
Trigger: GGGGCTGTATGGGCAGATTCAGTCTCCAGAGGGTAT...CACTGAAGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCATACCCTCTGGAGACTaGATCTGCCCATACAGCCCC +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPIPSGD*ICPYSP
Trigger: GGGGCTGTATGGGCAGATTCAGTCTCCAGAGGGTAT...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp GCTGCCTCTGCAACAGCCTCATGTTCCACAAGTGCTGACTCCACCTCTGCTGTACTCACACTCATCCCCTaGCTCTTGCATGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: AASATASCSTSADSTSAVLTLIP*LLHELM
Trigger: CATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAG...TACAGCAGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TGTATTTGTCCACAATGCTCCACAGGCGGTTCACGTCCGGATATGTGGGAATCCCCACACCCTTGGGTTTaGCTGTGGAGCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: CICPQCSTGGSRPDMWESPHPWV*LWSHWC
Trigger: ACACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGG...GGATTCCCACATATCCGGACGTGAACCGCCTGTGGAGCATTGTGGACAAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp AGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACCACAGCTGCCTTGTATTTGTCCACAATaGTCCACAGGCGGTTCACGT +
Preference number: 4 (lower is better)
Translates to: SSRGIHPSQDEGGPPQLPCICPQ*STGGSR
Trigger: ACGTGAACCGCCTGTGGAGCATTGTGGACAAATACA...AGGCAGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTACGGATGGCTGTGGGTaGTGTGTAGAACTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: QPLEPMGRQYWHLAQKGITDGCG*CVELGH
Trigger: GTGACCAAGTTCTACACAGCACCCACAGCCATCCGT...AATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TCATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGGCCACCTGTCTCTGTTTACGGATGGCTGTGGGTaGTGTGTAGAACTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SWVWHQEGESTCGHLSLFTDGCG*CVELGH
Trigger: GTGACCAAGTTCTACACAGCACCCACAGCCATCCGT...AAACAGAGACAGGTGGCCACATGTTGACTCCCCTTCCTGGTGCCACACCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp GGTTTTAGGCAAGCCAGGTGCATTCTGGATGTAGTCTGGTGTGGCAATGGGGCCAAGGATGCCCGGCTATaGTTGGTGACAGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: GFRQARCILDVVWCGNGAKDARL*LVTGSS
Trigger: AGATGAGCCTGTCACCAAGCATAGCCGGGCATCCTT...GGCCCCATTGCCACACCAGACTACATCCAGAATGCACCTGGCTTGCCTAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TTCATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGGCCACCTGTCTCTGTTTGGGTTCACCCACTGTaGCTAACACCTGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: FMGVAPGRGVNMWPPVSVWVHPL*LTPARM
Trigger: CATCCTTGCAGGTGTTAGGCACAGTGGGTGAACCCA...AACAGAGACAGGTGGCCACATGTTGACTCCCCTTCCTGGTGCCACACCCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAATAGGATTACACAGCTaGCTCCCTGCTTCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: CPYSPWSQWADSTGIWHKIGLHS*LPASVE
Trigger: CTCCACTGAAGCAGGGAGGCAGCTGTGTAATCCTAT...TTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCATCACACAAATCCCTGGCCAGGGCTaGTTGAACACCAGTAAAAAG +
Preference number: 4 (lower is better)
Translates to: LLLELLGELGAEGVAITQIPGQG*LNTSKK
Trigger: CTTTTTACTGGTGTTCAAGCAGCCCTGGCCAGGGAT...TTGTGTGATGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480978.5
CDS-3UTR GCA 90 bp CTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATGAAGAGTGGGTCCTCGGCGTCTCCCCAGAATTCTaGACTCACCACAAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: LGFACGATGVQDEEWVLGVSPEF*THHKEV
Trigger: CACTTCTTTGTGGTGAGTGCAGAATTCTGGGGAGAC...GCCGAGGACCCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR CCA 90 bp GGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCACCTTGGGTTTGCCTGTaGAGCCACTGGTGTACAGGA +
Preference number: 4 (lower is better)
Translates to: GANGQTVLASGTKGNSDPPWVCL*SHWCTG
Trigger: TCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGG...TGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGCCTTGGGTTTGCCTGTaGAGCCACTGGTGTACAGGA +
Preference number: 4 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPPWVCL*SHWCTG
Trigger: TCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGG...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCATGTGAACCACACCCTTaGGTTTGCCTGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: GANGQTVLASGTKGNSDPCEPHP*VCLWSH
Trigger: GTGGCTCCACAGGCAAACCCAAGGGTGTGGTTCACA...TGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAAACAAAACACTGGTaGCACCATTGGCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: QPLEPMGRQYWHLAQKGIQTKHW*HHWPVA
Trigger: GGCCACTGGCCAATGGTGCCACCAGTGTTTTGTTTG...AATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCCAAACAAAACACTGGTaGCACCATTGGCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SPWSQWADSTGIWHKREFQTKHW*HHWPVA
Trigger: GGCCACTGGCCAATGGTGCCACCAGTGTTTTGTTTG...GAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCTCTGGAGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACCTCAAACAAAACACTaGTGGCACCATTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PLETESAHTAPGANGQTVPQTKH*WHHWPV
Trigger: CACTGGCCAATGGTGCCACCAGTGTTTTGTTTGAGG...TACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCTCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCGCAGACGGATGGCTGTaGGTGCTGTGTAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPADGWL*VLCRTW
Trigger: CCAAGTTCTACACAGCACCCACAGCCATCCGTCTGC...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CTTTTCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGCCATCCTGGTCCCGCTaGCAGCCATCTCCTGTAACA +
Preference number: 4 (lower is better)
Translates to: LFSNLLLELLGELGAEGVPSWSR*QPSPVT
Trigger: TGTTACAGGAGATGGCTGCCAGCGGGACCAGGATGG...CACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGTTTTAGGCAAGCCAGGTGCATTCTGGATGTAGTCTGGTGTGGCAATGGGGCCTTGGGGCTGAAGGTGTaGCCATCACACAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: GFRQARCILDVVWCGNGALGLKV*PSHKVT
Trigger: TGTCACCTTGTGTGATGGCCACACCTTCAGCCCCAA...GGCCCCATTGCCACACCAGACTACATCCAGAATGCACCTGGCTTGCCTAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp ACCACAGCTGCCTCTGCAACAGCCTCATGTTCCACAAGTGCTGACTCCACCTCTTTGGGGCTGAAGGTGTaGCCATCACACAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: TTAASATASCSTSADSTSLGLKV*PSHKVT
Trigger: TGTCACCTTGTGTGATGGCCACACCTTCAGCCCCAA...AGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGCAGCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACCACAGCTGCCTGGATGTAGTCTGGTGTaGCAATGGGGCCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: SSRGIHPSQDEGGPPQLPGCSLV*QWGQSF
Trigger: AAAAGATTGGCCCCATTGCCACACCAGACTACATCC...AGGCAGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAGGATGTAGTCTGGTGTaGCAATGGGGCCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: LPIQPLEPMGRQYWHLAQGCSLV*QWGQSF
Trigger: AAAAGATTGGCCCCATTGCCACACCAGACTACATCC...TTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCACAGGATCATGTTCACTaGATGGTCAGGCAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: GANGQTVLASGTKGNSDPQDHVH*MVRQRW
Trigger: CCACCGCTGCCTGACCATCCAGTGAACATGATCCTG...TGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGAGGATGGGCAAAGTTTaGAGCAGGAGGAATCCTAGG +
Preference number: 4 (lower is better)
Translates to: PIQPLEPMGRQYWHLAQKRMGKV*SRRNPR
Trigger: CCTAGGATTCCTCCTGCTCCAAACTTTGCCCATCCT...CTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAACCTGGAGACAAAGCTaGTTTCCGGTCCCAGACAGC +
Preference number: 4 (lower is better)
Translates to: GANGQTVLASGTKGNSDPTWRQS*FPVPDS
Trigger: GCTGTCTGGGACCGGAAACCAGCTTTGTCTCCAGGT...TGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCCCTGTCCTTTCTGCCTaGCAGTCACAGGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: SPWSQWADSTGIWHKREFPVLSA*QSQDVV
Trigger: GACAACATCCTGTGACTGCCAGGCAGAAAGGACAGG...GAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGTAGTGTGGGTCAACACTGGCCCTCAGCACTCCTGAGGGGGCAAAGAGGATGGGACAGTACTGGCATCTaGCACAAAAGGGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: GSVGQHWPSALLRGQRGWDSTGI*HKREFR
Trigger: TCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTC...CCATCCTCTTTGCCCCCTCAGGAGTGCTGAGGGCCAGTGTTGACCCACACTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GATGAAGAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGCGACAGTACTGGCATCTaGCACAAAAGGGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: DEEWVLGITPLGLTLIPCDSTGI*HKREFR
Trigger: TCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTC...GCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACTGCCCATACAGCCCCTaGAGCCAATGGGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNCPYSP*SQWADS
Trigger: ACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAATGCCCATACAGCCCCTaGAGCCAATGGGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: ANGQTVLASGTKGNSDPECPYSP*SQWADS
Trigger: ACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA...TTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCATGTCTCTTATGGGCTaGGTTCTGTTCAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SPWSQWADSTGIWHKREFMSLMG*VLFRGG
Trigger: CCCTCCCCTGAACAGAACCCAGCCCATAAGAGACAT...GAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GCTGCCTCTGCAACAGCCTCATGTTCCACAAGTGCTGACTCCACCTCTGCTGTAATGTCTCTTATGGGCTaGGTTCTGTTCAGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AASATASCSTSADSTSAVMSLMG*VLFRGG
Trigger: CCCTCCCCTGAACAGAACCCAGCCCATAAGAGACAT...TACAGCAGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAAGCTGATGGTATGTaGTCTGAGTGGTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GANGQTVLASGTKGNSDPEADGM*SEWSPL
Trigger: CAGGGGAGACCACTCAGATCACATACCATCAGCTTC...TGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR TCA 90 bp GAAGGTTGTGGCTACATAGAGCATGTAGCCCCCAACTGTGTGAACCACACCCTTCACTGGTGTACAGGATaGAGAGTGGGTCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: EGCGYIEHVAPNCVNHTLHWCTG*RVGPRH
Trigger: ATGCCGAGGACCCACTCTTCATCCTGTACACCAGTG...AAGGGTGTGGTTCACACAGTTGGGGGCTACATGCTCTATGTAGCCACAACCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCACATCTCCAAACTTCATaGGCAGACGGATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: WQSQDVVSTWRQSWFPVPHLQTS*ADGWLW
Trigger: CCACAGCCATCCGTCTGCTCATGAAGTTTGGAGATG...TGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GTACTGGGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTCATCTCCAAACTTCATaGGCAGACGGATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VLGLPKRADIGLHSCLPAHLQTS*ADGWLW
Trigger: CCACAGCCATCCGTCTGCTCATGAAGTTTGGAGATG...AGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCCCAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCATCTCCAAACTTCATaGGCAGACGGATGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PGANGQTVLASGTKGNSDHLQTS*ADGWLW
Trigger: CCACAGCCATCCGTCTGCTCATGAAGTTTGGAGATG...GTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGTGTCCAGATACATTaGGCATGTCATCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: PIQPLEPMGRQYWHLAQKGVQIH*ACHQSC
Trigger: GCAGGATTGATGACATGCTCAATGTATCTGGACACC...CTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCATCACACAAGGTGGTGTCCAGATACATTaGGCATGTCATCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: LLELLGELGAEGVAITQGGVQIH*ACHQSC
Trigger: GCAGGATTGATGACATGCTCAATGTATCTGGACACC...ACCTTGTGTGATGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCGGCCATCACACAAGGTaGCAAAGCAGTAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: PGSHRMLSLPGDKAGFRSGHHTR*QSSRGI
Trigger: AATGCCTCTACTGCTTTGTCACCTTGTGTGATGGCC...GGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCAGGCCATCACACAAGGTaGCAAAGCAGTAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: SLICFLSSSVSLGLKVWPGHHTR*QSSRGI
Trigger: AATGCCTCTACTGCTTTGTCACCTTGTGTGATGGCC...TGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCATCACACAAGGTGACAAGGTCATGGTCATTCTaGGCAATCTTCCGAAGCACT +
Preference number: 4 (lower is better)
Translates to: LSSSVSLGLKVWPSHKVTRSWSF*AIFRST
Trigger: AGTGCTTCGGAAGATTGCTCAGAATGACCATGACCT...TGTCACCTTGTGTGATGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CCAACCAATGTCTGCCGTGCACCAGAACACATCCTCTGCATGGAAGTCAAACACCGGTGGCTGAAGAGGTaGCTGATGACAGATGGGTCA +
Preference number: 4 (lower is better)
Translates to: PTNVCRAPEHILCMEVKHRWLKR*LMTDGS
Trigger: TGACCCATCTGTCATCAGTCACCTCTTCAGCCACCG...GTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TCATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGGCCACCTGTCTCTGTTTCCCTCACATCCCCTTTaGACACTTAACTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SWVWHQEGESTCGHLSLFPSHPL*TLNLGR
Trigger: CCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGG...AAACAGAGACAGGTGGCCACATGTTGACTCCCCTTCCTGGTGCCACACCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTCTGCCCGCCCCAGGTaGTTGACCACAATGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LNLGRRGSLFVSVLGSESSARPR*LTTMQH
Trigger: ATGCTGCATTGTGGTCAAGCACCTGGGGCGGGCAGA...GCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp ACAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAATGGTGGAGTCACCCATaGCGAGCTCTGCCCGCCCCA +
Preference number: 4 (lower is better)
Translates to: TRKTSSSGPRNKTHLLLQWWSHP*RALPAP
Trigger: TGGGGCGGGCAGAGCTCGGCATGGGTGACTCCACCA...TTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCCTCACACTCATCCCCTaGCTCTTGCATGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPLTLIP*LLHELM
Trigger: CATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAG...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CCTCTGGAGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTATGTATTTGTCCACAATaGTCCACAGGCGGTTCACGT +
Preference number: 4 (lower is better)
Translates to: PLETESAHTAPGANGQTVCICPQ*STGGSR
Trigger: ACGTGAACCGCCTGTGGAGCATTGTGGACAAATACA...TACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCTCCAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TCCACAGGCGGTTCACGTCCGGATATGTGGGAATCCCCTCAAACAAAACACTGGACGGATGGCTGTGGGTaGTGTGTAGAACTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: STGGSRPDMWESPQTKHWTDGCG*CVELGH
Trigger: GTGACCAAGTTCTACACAGCACCCACAGCCATCCGT...CCAGTGTTTTGTTTGAGGGGATTCCCACATATCCGGACGTGAACCGCCTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCATGGGTTCACCCACTGTaGCTAACACCTGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: WQSQDVVSTWRQSWFPVPWVHPL*LTPARM
Trigger: CATCCTTGCAGGTGTTAGGCACAGTGGGTGAACCCA...TGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGTGGGTTCACCCACTGTaGCTAACACCTGCAAGGATG +
Preference number: 4 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPWVHPL*LTPARM
Trigger: CATCCTTGCAGGTGTTAGGCACAGTGGGTGAACCCA...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCATAGGATTACACAGCTaGCTCCCTGCTTCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: PGSHRMLSLPGDKAGFRSIGLHS*LPASVE
Trigger: CTCCACTGAAGCAGGGAGGCAGCTGTGTAATCCTAT...GGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp ATGAAGAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGCCGAATTCACAAAGAAGTaGCCACCTCACCATCATTTC +
Preference number: 4 (lower is better)
Translates to: MKSGSSASHHSGSHSSPAEFTKK*PPHHHF
Trigger: GAAATGATGGTGAGGTGGGCACTTCTTTGTGAATTC...GGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475459.6
CDS-3UTR CCA 90 bp TCCACAGGCGGTTCACGTCCGGATATGTGGGAATCCCCTCAAACAAAACACTGGGTTGTACCGAAGGAATaGGCCAGGGCATGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: STGGSRPDMWESPQTKHWVVPKE*ARAWSL
Trigger: AAGACTCCATGCCCTGGCCCATTCCTTCGGTACAAC...CCAGTGTTTTGTTTGAGGGGATTCCCACATATCCGGACGTGAACCGCCTGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAGGCACCATTGGCCAGTaGCCCATAGGTGACGTAGGA +
Preference number: 4 (lower is better)
Translates to: QWADSTGIWHKREFRPRTGTIGQ*PIGDVG
Trigger: TCCTACGTCACCTATGGGCCACTGGCCAATGGTGCC...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTCATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGGCCACCTGTCTCTGTTCCTCAAACAAAACACTaGTGGCACCATTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: FMGVAPGRGVNMWPPVSVPQTKH*WHHWPV
Trigger: CACTGGCCAATGGTGCCACCAGTGTTTTGTTTGAGG...AACAGAGACAGGTGGCCACATGTTGACTCCCCTTCCTGGTGCCACACCCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGCCCTCACATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGGCAGACGGATGGCTGTaGGTGCTGTGTAGAACTTGG +
Preference number: 4 (lower is better)
Translates to: GPHIPFEHLTWVGEVAFSADGWL*VLCRTW
Trigger: CCAAGTTCTACACAGCACCCACAGCCATCCGTCTGC...CGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp ATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGGCCACCTGTCTCTGTTTGCAGCTACACCAAAGAATaGGAAAGTAGCAGAACCGGG +
Preference number: 4 (lower is better)
Translates to: MGVAPGRGVNMWPPVSVCSYTKE*ESSRTG
Trigger: CCCGGTTCTGCTACTTTCCCATTCTTTGGTGTAGCT...GCAAACAGAGACAGGTGGCCACATGTTGACTCCCCTTCCTGGTGCCACACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACACCATCCTGGTCCCGCTaGCAGCCATCTCCTGTAACA +
Preference number: 4 (lower is better)
Translates to: QWADSTGIWHKREFRPRTPSWSR*QPSPVT
Trigger: TGTTACAGGAGATGGCTGCCAGCGGGACCAGGATGG...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AAAGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACCACAGCTGCGGATGTAGTCTGGTGTaGCAATGGGGCCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: KAVEAFTLHRMRVAHHSCGCSLV*QWGQSF
Trigger: AAAAGATTGGCCCCATTGCCACACCAGACTACATCC...GCAGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GACAAAGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACCACAGCATTCTGGATGTAGTCTaGTGTGGCAATGGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: DKAVEAFTLHRMRVAHHSILDVV*CGNGAN
Trigger: ATTGGCCCCATTGCCACACCAGACTACATCCAGAAT...GCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCTTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACACAAGGGAGGGTAGTGTaGGTCAACACTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QWADSTGIWHKREFRPRTQGRVV*VNTGPQ
Trigger: CTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTG...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GACAAAGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACCACAGCGATGTTGTCTCTACCTaGAGACAAAGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: DKAVEAFTLHRMRVAHHSDVVST*RQSWFP
Trigger: CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATC...GCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTCTGCAGTCTGGACCTGTCCTTTCTGCCTaGCAGTCACAGGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: GEVAFSSLFWVLRALQSGPVLSA*QSQDVV
Trigger: GACAACATCCTGTGACTGCCAGGCAGAAAGGACAGG...TCCAGACTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CTCTGCTGTACTCAGCAGGTGTCCAGATACATTGAGCATGTCATCAATCCTGCCAGACTGAGGCTGACCTaGGCCCTGTCCTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LCCTQQVSRYIEHVINPARLRLT*ALSFLP
Trigger: AGGCAGAAAGGACAGGGCCCAGGTCAGCCTCAGTCT...GGCAGGATTGATGACATGCTCAATGTATCTGGACACCTGCTGAGTACAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTGCCTCCCTGCTTCAGTaGAGGCCCTCACATCCCCTT +
Preference number: 4 (lower is better)
Translates to: LTWVGEVAFSSLFWVLRAASLLQ*RPSHPL
Trigger: AAGGGGATGTGAGGGCCTCCACTGAAGCAGGGAGGC...AGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTCATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGGCCACCTGTCTCTGTTATGGGCAGACAGTACTaGCATCTGGCACAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: FMGVAPGRGVNMWPPVSVMGRQY*HLAQKG
Trigger: TCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCAT...AACAGAGACAGGTGGCCACATGTTGACTCCCCTTCCTGGTGCCACACCCATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAAGCCCCTGGAGCCAATaGGCAGACAGTACTGGCATC +
Preference number: 4 (lower is better)
Translates to: QWADSTGIWHKREFRPRTSPWSQ*ADSTGI
Trigger: GATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCT...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCAGCCCCTGGAGCCAATaGGCAGACAGTACTGGCATC +
Preference number: 4 (lower is better)
Translates to: LNLGRRGSLFVSVLGSESSPWSQ*ADSTGI
Trigger: GATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCT...GCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TCCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTGAAGCTGATGGTATGTaGTCTGAGTGGTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SFLPGSHRMLSLPGDKAGEADGM*SEWSPL
Trigger: CAGGGGAGACCACTCAGATCACATACCATCAGCTTC...ACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR TCA 90 bp TCCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTAATCCCTTGGTTCCATaGGATCTGGGGCTGAACACG +
Preference number: 4 (lower is better)
Translates to: SFLPGSHRMLSLPGDKAGNPLVP*DLGLNT
Trigger: CGTGTTCAGCCCCAGATCTCATGGAACCAAGGGATT...ACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253382.5
CDS-3UTR TCA 90 bp ATCTCCAAACTTCATGAGCAGACGGATGGCTGTGGGTGCTGTGTAGAACTTGGTCCCGGCTATGCTTGGTaGCAGGCTCATCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: ISKLHEQTDGCGCCVELGPGYAW*QAHLQT
Trigger: AGTTTGGAGATGAGCCTGTCACCAAGCATAGCCGGG...ACCAAGTTCTACACAGCACCCACAGCCATCCGTCTGCTCATGAAGTTTGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTGCCAGGCCTCAGGGTTaGTGGGTTCACCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVARPQG*WVHPLC
Trigger: GCACAGTGGGTGAACCCATCAACCCTGAGGCCTGGC...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCATCCATCAATCCTGCCAGTaGTCCAGTAATAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: SNLLLELLGELGAEGVAIHQSCQ*SSNSHP
Trigger: AGGATGGCTATTACTGGATCACTGGCAGGATTGATG...GATGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR TCA 90 bp ATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTCACCCTTCACAGGATaGGGGTGGCCCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: IPFEHLTWVGEVAFSSLFSPFTG*GWPTTA
Trigger: AGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGA...GAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp AGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGGTCATGGTCATTCTaGGCAATCTTCCGAAGCACT +
Preference number: 4 (lower is better)
Translates to: SPWSQWADSTGIWHKREFRSWSF*AIFRST
Trigger: AGTGCTTCGGAAGATTGCTCAGAATGACCATGACCT...GAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCACCCTCACATCCCCTTTaGACACTTAACTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: WQSQDVVSTWRQSWFPVPPSHPL*TLNLGR
Trigger: CCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGG...TGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACTCTCCCCTGGCTCATTaGCCTCCCAGTAAAAAGCAA +
Preference number: 4 (lower is better)
Translates to: PGANGQTVLASGTKGNSDSPLAH*PPSKKQ
Trigger: TTGCTTTTTACTGGGAGGGCAATGAGCCAGGGGAGA...GTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp ATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCCCCAATGCGGGCACATaGCAGCATGGCCACCACAAG +
Preference number: 4 (lower is better)
Translates to: IPFEHLTWVGEVAFSSLFPNAGT*QHGHHK
Trigger: CTTGTGGTGGCCATGCTGGCATGTGCCCGCATTGGG...GAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp TCCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTCTCACACTCATCCCCTaGCTCTTGCATGAGCTCATG +
Preference number: 4 (lower is better)
Translates to: SFLPGSHRMLSLPGDKAGLTLIP*LLHELM
Trigger: CATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAG...ACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp GGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTCAGTGAACCAATGTCTGCCGTaGACCAGAACACATCCTCTG +
Preference number: 4 (lower is better)
Translates to: GLPKRADIGLHSCLPASVNQCLP*TRTHPL
Trigger: CAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTT...CACTGAAGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGAACCAATGTCTGCCGTaGACCAGAACACATCCTCTG +
Preference number: 4 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPNQCLP*TRTHPL
Trigger: CAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTT...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp GGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTCTGCAGTCTGGAAACCAATGTCTGCCGTaGACCAGAACACATCCTCTG +
Preference number: 4 (lower is better)
Translates to: GEVAFSSLFWVLRALQSGNQCLP*TRTHPL
Trigger: CAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTT...TCCAGACTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCGATCCAACCAATGTCTaGCGTGCACCAGAACACATC +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPDPTNV*RAPEHI
Trigger: GATGTGTTCTGGTGCACGGCAGACATTGGTTGGATC...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp GGCCCTCACATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGAAGGATGCCCGGCTATaGTTGGTGACAGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: GPHIPFEHLTWVGEVAFSKDARL*LVTGSS
Trigger: AGATGAGCCTGTCACCAAGCATAGCCGGGCATCCTT...CGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp ATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCACACAGCTGCCTCCCTaGTTCAGTGGAGGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: IPFEHLTWVGEVAFSSLFTQLPP*FSGGPH
Trigger: GTGAGGGCCTCCACTGAAGCAGGGAGGCAGCTGTGT...GAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCATAGGATTACACAGCTaGCTCCCTGCTTCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPIGLHS*LPASVE
Trigger: CTCCACTGAAGCAGGGAGGCAGCTGTGTAATCCTAT...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTGAATGGGCCAGGGCATaGAGTCTTCCAGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: QPLEPMGRQYWHLAQKGIEWARA*SLPVKF
Trigger: GAATTTTACTGGAAGACTCCATGCCCTGGCCCATTC...AATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AACCACACCCTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATGAAGAGTGGGAATGGGCCAGGGCATaGAGTCTTCCAGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: NHTLGFACGATGVQDEEWEWARA*SLPVKF
Trigger: GAATTTTACTGGAAGACTCCATGCCCTGGCCCATTC...CCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCAGAATGGGCCAGGGCATaGAGTCTTCCAGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: SLICFLSSSVSLGLKVWPEWARA*SLPVKF
Trigger: GAATTTTACTGGAAGACTCCATGCCCTGGCCCATTC...TGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACGTTGTACCGAAGGAATaGGCCAGGGCATGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNVVPKE*ARAWSL
Trigger: AAGACTCCATGCCCTGGCCCATTCCTTCGGTACAAC...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CTTTTCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGTTGTACCGAAGGAATaGGCCAGGGCATGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LFSNLLLELLGELGAEGVVVPKE*ARAWSL
Trigger: AAGACTCCATGCCCTGGCCCATTCCTTCGGTACAAC...CACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCAACCAATGTCTGCCGTGCACCAGAACACATCCTCTGCATGGAAGTCAAACACGTTGTACCGAAGGAATaGGCCAGGGCATGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PTNVCRAPEHILCMEVKHVVPKE*ARAWSL
Trigger: AAGACTCCATGCCCTGGCCCATTCCTTCGGTACAAC...GTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAATGCAGCATCTTACTaGGAAACCCTTCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: CPYSPWSQWADSTGIWHKNAASY*ETLLLT
Trigger: TGTCAGGAGAAGGGTTTCCCAGTAAGATGCTGCATT...TTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CCA 90 bp AGAACTTGGTCACCTTGTATTTGTCCACAATGCTCCACAGGCGGTTCACGTCCGCAAACAAAACACTGGTaGCACCATTGGCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: RTWSPCICPQCSTGGSRPQTKHW*HHWPVA
Trigger: GGCCACTGGCCAATGGTGCCACCAGTGTTTTGTTTG...CGGACGTGAACCGCCTGTGGAGCATTGTGGACAAATACAAGGTGACCAAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAAACAAAACACTGGTaGCACCATTGGCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: ANGQTVLASGTKGNSDPEQTKHW*HHWPVA
Trigger: GGCCACTGGCCAATGGTGCCACCAGTGTTTTGTTTG...TTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCTCTGGAGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTATCACGTCCGGATATGTaGGAATCCCCTCAAACAAAA +
Preference number: 4 (lower is better)
Translates to: PLETESAHTAPGANGQTVSRPDM*ESPQTK
Trigger: TTTTGTTTGAGGGGATTCCCACATATCCGGACGTGA...TACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCTCCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GAAACCCTTCTCCTGACACTTCTGCAGGGCCTCGTCAGCCAGCTCCTTCAGGTTTCACGTCCGGATATGTaGGAATCCCCTCAAACAAAA +
Preference number: 4 (lower is better)
Translates to: ETLLLTLLQGLVSQLLQVSRPDM*ESPQTK
Trigger: TTTTGTTTGAGGGGATTCCCACATATCCGGACGTGA...AACCTGAAGGAGCTGGCTGACGAGGCCCTGCAGAAGTGTCAGGAGAAGGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR CCA 90 bp GGCCCTCACATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTTGGGGCTGAAGGTGTaGCCATCACACAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: GPHIPFEHLTWVGEVAFSLGLKV*PSHKVT
Trigger: TGTCACCTTGTGTGATGGCCACACCTTCAGCCCCAA...CGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATGGATGTAGTCTGGTGTaGCAATGGGGCCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: RLNLPIQPLEPMGRQYWHGCSLV*QWGQSF
Trigger: AAAAGATTGGCCCCATTGCCACACCAGACTACATCC...ATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTATTCTGGATGTAGTCTaGTGTGGCAATGGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: QPLEPMGRQYWHLAQKGIILDVV*CGNGAN
Trigger: ATTGGCCCCATTGCCACACCAGACTACATCCAGAAT...AATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAAGGTGACAAAGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACATTCTGGATGTAGTCTaGTGTGGCAATGGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: QGDKAVEAFTLHRMRVAHILDVV*CGNGAN
Trigger: ATTGGCCCCATTGCCACACCAGACTACATCCAGAAT...GTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCTTTGTCACCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTCATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGGCCACCTGTCTCTGTTGTGACTGATGACAGATaGGTCAGCCACAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: FMGVAPGRGVNMWPPVSVVTDDR*VSHSRH
Trigger: ATGTCTACTGTGGCTGACCCATCTGTCATCAGTCAC...AACAGAGACAGGTGGCCACATGTTGACTCCCCTTCCTGGTGCCACACCCATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GTACTGGGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTAGGATGGGCAAAGTTTaGAGCAGGAGGAATCCTAGG +
Preference number: 4 (lower is better)
Translates to: VLGLPKRADIGLHSCLPARMGKV*SRRNPR
Trigger: CCTAGGATTCCTCCTGCTCCAAACTTTGCCCATCCT...AGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCCCAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCGATGTTGTCTCTACCTaGAGACAAAGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: PGSHRMLSLPGDKAGFRSDVVST*RQSWFP
Trigger: CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATC...GGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AGTAGCAGAACCGGGTTTCATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGTTTTCGTCTCTGTTCTaGGTTCTGAGAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SSRTGFHGCGTRKGSQHVFSSLF*VLRALQ
Trigger: CTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAA...CACATGTTGACTCCCCTTCCTGGTGCCACACCCATGAAACCCGGTTCTGCTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTCAGTGATGGGCAGACAGTACTaGCATCTGGCACAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GLPKRADIGLHSCLPASVMGRQY*HLAQKG
Trigger: TCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCAT...CACTGAAGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GCATGTAGATGGCCACTCGGTCCCCCTTCTGAATGCCCTGTTTTCGGAGAACATTTCGGAGAACATTGCTaGACTGACACACTTGGACCA +
Preference number: 4 (lower is better)
Translates to: ACRWPLGPPSECPVFGEHFGEHC*TDTLGP
Trigger: TGGTCCAAGTGTGTCAGTTCAGCAATGTTCTCCGAA...ATGTTCTCCGAAAACAGGGCATTCAGAAGGGGGACCGAGTGGCCATCTACATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR TCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTGGGAAACCCTTCTCCTaGCACTTCTGCAGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVGKPFS*HFCRAS
Trigger: CGAGGCCCTGCAGAAGTGTCAGGAGAAGGGTTTCCC...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR TCA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACACGTAGGAATGACCAGTaGTCCAACCAATGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: QWADSTGIWHKREFRPRTRRNDQ*SNQCLP
Trigger: CGGCAGACATTGGTTGGATCACTGGTCATTCCTACG...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp ACAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAACATAGACTGTGCGCATaGTCCCTGGCCAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TRKTSSSGPRNKTHLLLQHRLCA*SLARAA
Trigger: AGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATG...TTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GCTTCACCTTCCAACTCTTCCCCGGACTCATTCAGGATTGCAGGAGCTACACCACATCAATCCTGCCAGTaGTCCAGTAATAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: ASPSNSSPDSFRIAGATPHQSCQ*SSNSHP
Trigger: AGGATGGCTATTACTGGATCACTGGCAGGATTGATG...TGGTGTAGCTCCTGCAATCCTGAATGAGTCCGGGGAAGAGTTGGAAGGTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTCAGTGCATCAATCCTGCCAGTaGTCCAGTAATAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: GLPKRADIGLHSCLPASVHQSCQ*SSNSHP
Trigger: AGGATGGCTATTACTGGATCACTGGCAGGATTGATG...CACTGAAGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAAATGTTCCACAAGTGCTaGCTCCACCTCTGCTGTACT +
Preference number: 4 (lower is better)
Translates to: ANGQTVLASGTKGNSDPEMFHKC*LHLCCT
Trigger: AGTACAGCAGAGGTGGAGTCAGCACTTGTGGAACAT...TTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACGGCCATCACACAAGGTaGCAAAGCAGTAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNGHHTR*QSSRGI
Trigger: AATGCCTCTACTGCTTTGTCACCTTGTGTGATGGCC...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GCTGTACTCAGCAGGTGTCCAGATACATTGAGCATGTCATCAATCCTGCCAGTGGAAGCACTCGCCTCATaGTTTTCCCTGAGCGGGTTT +
Preference number: 4 (lower is better)
Translates to: AVLSRCPDTLSMSSILPVEALAS*FSLSGF
Trigger: AAACCCGCTCAGGGAAAATCATGAGGCGAGTGCTTC...CACTGGCAGGATTGATGACATGCTCAATGTATCTGGACACCTGCTGAGTACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTCGGTGGCTGAAGAGGTaGCTGATGACAGATGGGTCA +
Preference number: 4 (lower is better)
Translates to: LTWVGEVAFSSLFWVLRARWLKR*LMTDGS
Trigger: TGACCCATCTGTCATCAGTCACCTCTTCAGCCACCG...AGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACCCTCACATCCCCTTTaGACACTTAACTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: ANGQTVLASGTKGNSDPEPSHPL*TLNLGR
Trigger: CCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGG...TTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCATCTTGCATGAGCTCATaGCACCACAAGTCAATCCCT +
Preference number: 4 (lower is better)
Translates to: WQSQDVVSTWRQSWFPVPSCMSS*HHKSIP
Trigger: AGGGATTGACTTGTGGTGGCATGAGCTCATGCAAGA...TGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp GGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTCAGTGTCTTGCATGAGCTCATaGCACCACAAGTCAATCCCT +
Preference number: 4 (lower is better)
Translates to: GLPKRADIGLHSCLPASVSCMSS*HHKSIP
Trigger: AGGGATTGACTTGTGGTGGCATGAGCTCATGCAAGA...CACTGAAGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp GTCCCGCTGGCAGCCATCTCCTGTAACATAGTATCCAGGAAACTTCTTAAAGTACCACACCCTTGGGTTTaGCTGTGGAGCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: VPLAAISCNIVSRKLLKVPHPWV*LWSHWC
Trigger: ACACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGG...TACTTTAAGAAGTTTCCTGGATACTATGTTACAGGAGATGGCTGCCAGCGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CACACCCTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATGAAGAGTGGGTCCCAGAACACATCCTCTaGATGGAAGTCAAACACATA +
Preference number: 4 (lower is better)
Translates to: HTLGFACGATGVQDEEWVPEHIL*MEVKHI
Trigger: TATGTGTTTGACTTCCATGCAGAGGATGTGTTCTGG...GACCCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTGATCCAACCAATGTCTaGCGTGCACCAGAACACATC +
Preference number: 4 (lower is better)
Translates to: PFCLAVTGCCLYLETKLVDPTNV*RAPEHI
Trigger: GATGTGTTCTGGTGCACGGCAGACATTGGTTGGATC...AACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACGATCCAACCAATGTCTaGCGTGCACCAGAACACATC +
Preference number: 4 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNDPTNV*RAPEHI
Trigger: GATGTGTTCTGGTGCACGGCAGACATTGGTTGGATC...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CCAACCAATGTCTGCCGTGCACCAGAACACATCCTCTGCATGGAAGTCAAACACGATCCAACCAATGTCTaGCGTGCACCAGAACACATC +
Preference number: 4 (lower is better)
Translates to: PTNVCRAPEHILCMEVKHDPTNV*RAPEHI
Trigger: GATGTGTTCTGGTGCACGGCAGACATTGGTTGGATC...GTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACTGTATTTGTCCACAATaGTCCACAGGCGGTTCACGT +
Preference number: 4 (lower is better)
Translates to: PGANGQTVLASGTKGNSDCICPQ*STGGSR
Trigger: ACGTGAACCGCCTGTGGAGCATTGTGGACAAATACA...GTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCTGTATTTGTCCACAATaGTCCACAGGCGGTTCACGT +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPCICPQ*STGGSR
Trigger: ACGTGAACCGCCTGTGGAGCATTGTGGACAAATACA...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGTGGCCCACCACAGCTaGCTCTGCAACAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: QGRQAPLALGTKHIYSFKVAHHS*LCNSLM
Trigger: CATGAGGCTGTTGCAGAGGCAGCTGTGGTGGGCCAC...TTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTGTGGCCCACCACAGCTaGCTCTGCAACAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVVAHHS*LCNSLM
Trigger: CATGAGGCTGTTGCAGAGGCAGCTGTGGTGGGCCAC...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp GGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTCAGTGTTTAGGCAAGCCAGGTaGATTCTGGATGTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: GLPKRADIGLHSCLPASVFRQAR*ILDVVW
Trigger: CCAGACTACATCCAGAATGCACCTGGCTTGCCTAAA...CACTGAAGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GAGCTCTGCCCGCCCCAGGTGCTTGACCACAATGCAGCATCTTACTGGGAAACCCCAAGCTTTTTCTCATaGACATTTCGATCCAGTACA +
Preference number: 4 (lower is better)
Translates to: ELCPPQVLDHNAASYWETPSFFS*TFRSST
Trigger: TGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGG...GGTTTCCCAGTAAGATGCTGCATTGTGGTCAAGCACCTGGGGCGGGCAGAGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR CCA 90 bp TCCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTGGCCACCACAAGCTCTaGGATCATAGGCATGTAGAT +
Preference number: 4 (lower is better)
Translates to: SFLPGSHRMLSLPGDKAGGHHKL*DHRHVD
Trigger: ATCTACATGCCTATGATCCCAGAGCTTGTGGTGGCC...ACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CCA 90 bp CAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGGGCACATGCCAGCATaGCCACCACAAGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: QGRQAPLALGTKHIYSFKGHMPA*PPQALG
Trigger: TCCCAGAGCTTGTGGTGGCCATGCTGGCATGTGCCC...TTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CCA 90 bp TTTTCGGAGAACATTGCTGAACTGACACACTTGGACCAGAAGCTGATGGTATGTGGGCACATGCCAGCATaGCCACCACAAGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: FSENIAELTHLDQKLMVCGHMPA*PPQALG
Trigger: TCCCAGAGCTTGTGGTGGCCATGCTGGCATGTGCCC...ACATACCATCAGCTTCTGGTCCAAGTGTGTCAGTTCAGCAATGTTCTCCGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR CCA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAGCCTGCAAACACAATaGAGTGCAAAGCCCCAATGC +
Preference number: 4 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNSLQTQ*SAKPQC
Trigger: GCATTGGGGCTTTGCACTCCATTGTGTTTGCAGGCT...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CCA 90 bp TCATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGGCCACCTGTCTCTGTTTAATGCAGCATCTTACTaGGAAACCCTTCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: SWVWHQEGESTCGHLSLFNAASY*ETLLLT
Trigger: TGTCAGGAGAAGGGTTTCCCAGTAAGATGCTGCATT...AAACAGAGACAGGTGGCCACATGTTGACTCCCCTTCCTGGTGCCACACCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR CCA 90 bp CCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGTGCTGTGTAGAACTTaGTCACCTTGTATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PIQPLEPMGRQYWHLAQKVLCRT*SPCICP
Trigger: TGGACAAATACAAGGTGACCAAGTTCTACACAGCAC...CTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTCCTGGACTCACAAATCATTGTTTTTAAGGGCAAGTGCATGCCCAATATAAGTACGATGGGGCAGCGCTaGGCACCTACCACCCGGTGG +
Preference number: 4 (lower is better)
Translates to: FLDSQIIVFKGKCMPNISTMGQR*APTTRW
Trigger: CCACCGGGTGGTAGGTGCCCAGCGCTGCCCCATCGT...ACTTATATTGGGCATGCACTTGCCCTTAAAAACAATGATTTGTGAGTCCAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTCAGTGAGCTACACCAAAGAATaGGAAAGTAGCAGAACCGGG +
Preference number: 4 (lower is better)
Translates to: GLPKRADIGLHSCLPASVSYTKE*ESSRTG
Trigger: CCCGGTTCTGCTACTTTCCCATTCTTTGGTGTAGCT...CACTGAAGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGCTACACCAAAGAATaGGAAAGTAGCAGAACCGGG +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPSYTKE*ESSRTG
Trigger: CCCGGTTCTGCTACTTTCCCATTCTTTGGTGTAGCT...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GATATGTGGGAATCCCCTCAAACAAAACACTGGTGGCACCATTGGCCAGTGGCCAGCTACACCAAAGAATaGGAAAGTAGCAGAACCGGG +
Preference number: 4 (lower is better)
Translates to: DMWESPQTKHWWHHWPVASYTKE*ESSRTG
Trigger: CCCGGTTCTGCTACTTTCCCATTCTTTGGTGTAGCT...GGCCACTGGCCAATGGTGCCACCAGTGTTTTGTTTGAGGGGATTCCCACATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTGACTGATGACAGATaGGTCAGCCACAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPVTDDR*VSHSRH
Trigger: ATGTCTACTGTGGCTGACCCATCTGTCATCAGTCAC...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGCCCTCACATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGAGGATGGGCAAAGTTTaGAGCAGGAGGAATCCTAGG +
Preference number: 4 (lower is better)
Translates to: GPHIPFEHLTWVGEVAFSRMGKV*SRRNPR
Trigger: CCTAGGATTCCTCCTGCTCCAAACTTTGCCCATCCT...CGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGAAGCCCGGTCCCAGACAGCTaGTCAAGGGAGGGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: KTSSSGPRNKTHLLLQRSPVPDS*SREGSV
Trigger: CACACTACCCTCCCTTGACCAGCTGTCTGGGACCGG...GCTTCTTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGAACCGGTCCCAGACAGCTaGTCAAGGGAGGGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: GRQAPLALGTKHIYSFKEPVPDS*SREGSV
Trigger: CACACTACCCTCCCTTGACCAGCTGTCTGGGACCGG...TTCTTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCGATGTTGTCTCTACCTaGAGACAAAGCTGGTTTCCG +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPDVVST*RQSWFP
Trigger: CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATC...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp ATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCAGACTGAGGCTGACCTaGGCCCTGTCCTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: IPFEHLTWVGEVAFSSLFRLRLT*ALSFLP
Trigger: AGGCAGAAAGGACAGGGCCCAGGTCAGCCTCAGTCT...GAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACTTTTCGTCTCTGTTCTaGGTTCTGAGAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PGANGQTVLASGTKGNSDFSSLF*VLRALQ
Trigger: CTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAA...GTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GAGCATGTAGCCCCCAACTGTGTGAACCACACCCTTGGGTTTGCCTGTGGAGCCTTTGAACACTTAACTTaGGTAGGAGAGGTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: EHVAPNCVNHTLGFACGAFEHLT*VGEVAF
Trigger: AAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA...GGCTCCACAGGCAAACCCAAGGGTGTGGTTCACACAGTTGGGGGCTACATGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGAAGCGCCTCCCTGCTTCAGTaGAGGCCCTCACATCCCCTT +
Preference number: 4 (lower is better)
Translates to: KTSSSGPRNKTHLLLQRSASLLQ*RPSHPL
Trigger: AAGGGGATGTGAGGGCCTCCACTGAAGCAGGGAGGC...GCTTCTTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GTCCCGCTGGCAGCCATCTCCTGTAACATAGTATCCAGGAAACTTCTTAAAGTATGCCCATACAGCCCCTaGAGCCAATGGGCAGACAGT +
Preference number: 4 (lower is better)
Translates to: VPLAAISCNIVSRKLLKVCPYSP*SQWADS
Trigger: ACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA...TACTTTAAGAAGTTTCCTGGATACTATGTTACAGGAGATGGCTGCCAGCGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAGAACATTGCTGAACTaGCACACTTGGACCAGAAGC +
Preference number: 4 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNRTLLN*HTWTRS
Trigger: GCTTCTGGTCCAAGTGTGTCAGTTCAGCAATGTTCT...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR TCA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACTTCGGAGAACATTGCTaGACTGACACACTTGGACCA +
Preference number: 4 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNFGEHC*TDTLGP
Trigger: TGGTCCAAGTGTGTCAGTTCAGCAATGTTCTCCGAA...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR TCA 90 bp GGCCCTCACATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTTCGGAGAACATTGCTaGACTGACACACTTGGACCA +
Preference number: 4 (lower is better)
Translates to: GPHIPFEHLTWVGEVAFSFGEHC*TDTLGP
Trigger: TGGTCCAAGTGTGTCAGTTCAGCAATGTTCTCCGAA...CGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR TCA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACACATGAGATCTGGGGCTaGACACGCTTGGATTTCTCT +
Preference number: 4 (lower is better)
Translates to: QWADSTGIWHKREFRPRTHEIWG*TRLDFS
Trigger: AGAGAAATCCAAGCGTGTTCAGCCCCAGATCTCATG...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253382.5
CDS-3UTR TCA 90 bp GTCAAACACATACTTGAAGGTTGTGGCTACATAGAGCATGTAGCCCCCAACTGTCACTGGTGTACAGGATaGAGAGTGGGTCCTCGGCAT +
Preference number: 4 (lower is better)
Translates to: VKHILEGCGYIEHVAPNCHWCTG*RVGPRH
Trigger: ATGCCGAGGACCCACTCTTCATCCTGTACACCAGTG...ACAGTTGGGGGCTACATGCTCTATGTAGCCACAACCTTCAAGTATGTGTTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp ATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCCCCGGCTATGCTTGGTaGCAGGCTCATCTCCAAACT +
Preference number: 4 (lower is better)
Translates to: IPFEHLTWVGEVAFSSLFPGYAW*QAHLQT
Trigger: AGTTTGGAGATGAGCCTGTCACCAAGCATAGCCGGG...GAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp AGAACTTGGTCACCTTGTATTTGTCCACAATGCTCCACAGGCGGTTCACGTCCGGGTGTCCAGATACATTaGGCATGTCATCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: RTWSPCICPQCSTGGSRPGVQIH*ACHQSC
Trigger: GCAGGATTGATGACATGCTCAATGTATCTGGACACC...CGGACGTGAACCGCCTGTGGAGCATTGTGGACAAATACAAGGTGACCAAGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TTTCTCATGGACATTTCGATCCAGTACATTGTAGCAGATGTTGGTAGTTGCTCCTCACCCTTCACAGGATaGGGGTGGCCCACCACAGCT +
Preference number: 4 (lower is better)
Translates to: FLMDISIQYIVADVGSCSSPFTG*GWPTTA
Trigger: AGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGA...GGAGCAACTACCAACATCTGCTACAATGTACTGGATCGAAATGTCCATGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR TCA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAGGCCATCACACAAGGTaGCAAAGCAGTAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: QWADSTGIWHKREFRPRTGHHTR*QSSRGI
Trigger: AATGCCTCTACTGCTTTGTCACCTTGTGTGATGGCC...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp ATCTCCAAACTTCATGAGCAGACGGATGGCTGTGGGTGCTGTGTAGAACTTGGTGGCCATCACACAAGGTaGCAAAGCAGTAGAGGCATT +
Preference number: 4 (lower is better)
Translates to: ISKLHEQTDGCGCCVELGGHHTR*QSSRGI
Trigger: AATGCCTCTACTGCTTTGTCACCTTGTGTGATGGCC...ACCAAGTTCTACACAGCACCCACAGCCATCCGTCTGCTCATGAAGTTTGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GTACTGGGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTCTTCAAAGAAGCAGATaGTCTGAATACCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: VLGLPKRADIGLHSCLPALQRSR*SEYPLE
Trigger: CTCCAGAGGGTATTCAGATCATCTGCTTCTTTGAAG...AGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCCCAGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAAACAGAGTTTCATCTaGGAATGTCTCTTATGGGCT +
Preference number: 4 (lower is better)
Translates to: CPYSPWSQWADSTGIWHKKQSFI*ECLLWA
Trigger: AGCCCATAAGAGACATTCTCAGATGAAACTCTGTTT...TTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAGGTCCCCCTTCTGAATaGCCTGTTTTCGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: QWADSTGIWHKREFRPRTGPPSE*PVFGEH
Trigger: ATGTTCTCCGAAAACAGGGCATTCAGAAGGGGGACC...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp GAAGGTTGTGGCTACATAGAGCATGTAGCCCCCAACTGTGTGAACCACACCCTTTCTTGCATGAGCTCATaGCACCACAAGTCAATCCCT +
Preference number: 4 (lower is better)
Translates to: EGCGYIEHVAPNCVNHTLSCMSS*HHKSIP
Trigger: AGGGATTGACTTGTGGTGGCATGAGCTCATGCAAGA...AAGGGTGTGGTTCACACAGTTGGGGGCTACATGCTCTATGTAGCCACAACCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAACCACACCCTTGGGTTTaGCTGTGGAGCCACTGGTGT +
Preference number: 4 (lower is better)
Translates to: QGRQAPLALGTKHIYSFKPHPWV*LWSHWC
Trigger: ACACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGG...TTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp AGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATATCTTTTCTCTAATCTaGTTCTTGAGCTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: RLNLPIQPLEPMGRQYWHIFSLI*FLSSSV
Trigger: CACCGAGGAGCTCAAGAAGCAGATTAGAGAAAAGAT...ATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCAATCTTTTCTCTAATCTaGTTCTTGAGCTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: SLICFLSSSVSLGLKVWPIFSLI*FLSSSV
Trigger: CACCGAGGAGCTCAAGAAGCAGATTAGAGAAAAGAT...TGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CTGAATGCCCTGTTTTCGGAGAACATTGCTGAACTGACACACTTGGACCAGAAGGTTGTACCGAAGGAATaGGCCAGGGCATGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: LNALFSENIAELTHLDQKVVPKE*ARAWSL
Trigger: AAGACTCCATGCCCTGGCCCATTCCTTCGGTACAAC...CTTCTGGTCCAAGTGTGTCAGTTCAGCAATGTTCTCCGAAAACAGGGCATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR CCA 90 bp TTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCATCACACAAGGTGCCAAGCTTTTTCTCATaGACATTTCGATCCAGTACA +
Preference number: 4 (lower is better)
Translates to: FLSSSVSLGLKVWPSHKVPSFFS*TFRSST
Trigger: TGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGG...CACCTTGTGTGATGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CCA 90 bp AAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGAAGCCTGAGTGGTCTCCCCTaGCTCATTGCCCTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: KTSSSGPRNKTHLLLQRSLSGLP*LIALPV
Trigger: TACTGGGAGGGCAATGAGCCAGGGGAGACCACTCAG...GCTTCTTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CCA 90 bp GGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAAATGCAGCATCTTACTaGGAAACCCTTCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: GANGQTVLASGTKGNSDPNAASY*ETLLLT
Trigger: TGTCAGGAGAAGGGTTTCCCAGTAAGATGCTGCATT...TGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CCA 90 bp CCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACGGGGCTGAACACGCTTaGATTTCTCTTTCAGTTTAC +
Preference number: 4 (lower is better)
Translates to: PGANGQTVLASGTKGNSDGAEHA*ISLSVY
Trigger: GTAAACTGAAAGAGAAATCCAAGCGTGTTCAGCCCC...GTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253382.5
CDS-3UTR CCA 90 bp CCTCTGGAGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTAAACACATCCTCTGCATaGAAGTCAAACACATACTTG +
Preference number: 4 (lower is better)
Translates to: PLETESAHTAPGANGQTVNTSSA*KSNTYL
Trigger: CAAGTATGTGTTTGACTTCCATGCAGAGGATGTGTT...TACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCTCCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp ACAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAACGGGTTTCATGGGTGTaGCACCAGGAAGGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: TRKTSSSGPRNKTHLLLQRVSWV*HQEGES
Trigger: TGACTCCCCTTCCTGGTGCCACACCCATGAAACCCG...TTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TCCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTATTCTGGATGTAGTCTaGTGTGGCAATGGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: SFLPGSHRMLSLPGDKAGILDVV*CGNGAN
Trigger: ATTGGCCCCATTGCCACACCAGACTACATCCAGAAT...ACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAAGTGACTGATGACAGATaGGTCAGCCACAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: ANGQTVLASGTKGNSDPEVTDDR*VSHSRH
Trigger: ATGTCTACTGTGGCTGACCCATCTGTCATCAGTCAC...TTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCAACCAATGTCTGCCGTGCACCAGAACACATCCTCTGCATGGAAGTCAAACACTTTTCGTCTCTGTTCTaGGTTCTGAGAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PTNVCRAPEHILCMEVKHFSSLF*VLRALQ
Trigger: CTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAA...GTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCAGACATTGGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGACAGTACTGGCATCTaGCACAAAAGGGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPDSTGI*HKREFR
Trigger: TCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTC...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCATGGGCAGACAGTACTaGCATCTGGCACAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: LNLGRRGSLFVSVLGSESMGRQY*HLAQKG
Trigger: TCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCAT...GCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GCCTCTGCAACAGCCTCATGTTCCACAAGTGCTGACTCCACCTCTGCTGTACTCAGTCAAACACATACTTaGAGGTTGTGGCTACATAGA +
Preference number: 4 (lower is better)
Translates to: ASATASCSTSADSTSAVLSQTHT*RLWLHR
Trigger: TCTATGTAGCCACAACCTTCAAGTATGTGTTTGACT...GAGTACAGCAGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp ATCTCCAAACTTCATGAGCAGACGGATGGCTGTGGGTGCTGTGTAGAACTTGGTAGGTCATGGTCATTCTaGGCAATCTTCCGAAGCACT +
Preference number: 4 (lower is better)
Translates to: ISKLHEQTDGCGCCVELGRSWSF*AIFRST
Trigger: AGTGCTTCGGAAGATTGCTCAGAATGACCATGACCT...ACCAAGTTCTACACAGCACCCACAGCCATCCGTCTGCTCATGAAGTTTGGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TGCCGTGCACCAGAACACATCCTCTGCATGGAAGTCAAACACATACTTGAAGGTGGTCCCCCTTCTGAATaGCCTGTTTTCGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: CRAPEHILCMEVKHILEGGPPSE*PVFGEH
Trigger: ATGTTCTCCGAAAACAGGGCATTCAGAAGGGGGACC...ACCTTCAAGTATGTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR GCA 90 bp ATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCGCAAACACAATGGAGTaGAAAGCCCCAATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: IPFEHLTWVGEVAFSSLFANTME*KAPMRA
Trigger: TGCCCGCATTGGGGCTTTGCACTCCATTGTGTTTGC...GAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp ATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCACGGATGGCTGTGGGTaGTGTGTAGAACTTGGTCAC +
Preference number: 4 (lower is better)
Translates to: IPFEHLTWVGEVAFSSLFTDGCG*CVELGH
Trigger: GTGACCAAGTTCTACACAGCACCCACAGCCATCCGT...GAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TCCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTGGACTCATTCAGGATTaGAGGAGCTACACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: SFLPGSHRMLSLPGDKAGGLIQD*RSYTKE
Trigger: TTCTTTGGTGTAGCTCCTGCAATCCTGAATGAGTCC...ACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTTTAGGCAAGCCAGGTaGATTCTGGATGTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: LNLGRRGSLFVSVLGSESFRQAR*ILDVVW
Trigger: CCAGACTACATCCAGAATGCACCTGGCTTGCCTAAA...GCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCCTCACCACAAAGAAGTaGCCACCTCACCATCATTTC +
Preference number: 4 (lower is better)
Translates to: LNLGRRGSLFVSVLGSESLTTKK*PPHHHF
Trigger: GAAATGATGGTGAGGTGGGCACTTCTTTGTGGTGAG...GCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR CCA 90 bp ACAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAATGTGAACCACACCCTTaGGTTTGCCTGTGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: TRKTSSSGPRNKTHLLLQCEPHP*VCLWSH
Trigger: GTGGCTCCACAGGCAAACCCAAGGGTGTGGTTCACA...TTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp ACCACAGCTGCCTCTGCAACAGCCTCATGTTCCACAAGTGCTGACTCCACCTCTAACACATCCTCTGCATaGAAGTCAAACACATACTTG +
Preference number: 4 (lower is better)
Translates to: TTAASATASCSTSADSTSNTSSA*KSNTYL
Trigger: CAAGTATGTGTTTGACTTCCATGCAGAGGATGTGTT...AGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGCAGCTGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGTTTTAGGCAAGCCAGGTGCATTCTGGATGTAGTCTGGTGTGGCAATGGGGCCAACACATCCTCTGCATaGAAGTCAAACACATACTTG +
Preference number: 4 (lower is better)
Translates to: GFRQARCILDVVWCGNGANTSSA*KSNTYL
Trigger: CAAGTATGTGTTTGACTTCCATGCAGAGGATGTGTT...GGCCCCATTGCCACACCAGACTACATCCAGAATGCACCTGGCTTGCCTAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTCAGTGGTGCTGTGTAGAACTTaGTCACCTTGTATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: GLPKRADIGLHSCLPASVVLCRT*SPCICP
Trigger: TGGACAAATACAAGGTGACCAAGTTCTACACAGCAC...CACTGAAGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCGTGCTGTGTAGAACTTaGTCACCTTGTATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: WSQWADSTGIWHKREFRPVLCRT*SPCICP
Trigger: TGGACAAATACAAGGTGACCAAGTTCTACACAGCAC...GGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTGACAGTACTGGCATCTaGCACAAAAGGGAATTCAGA +
Preference number: 4 (lower is better)
Translates to: PFCLAVTGCCLYLETKLVDSTGI*HKREFR
Trigger: TCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTC...AACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACACAAGTCAATCCCTTaGTTCCATGAGATCTGCACA +
Preference number: 4 (lower is better)
Translates to: ANGQTVLASGTKGNSDPEHKSIP*FHEICT
Trigger: TGTGCAGATCTCATGGAACCAAGGGATTGACTTGTG...TTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CCA 90 bp CATGTAGATGGCCACTCGGTCCCCCTTCTGAATGCCCTGTTTTCGGAGAACATTCACAAGTCAATCCCTTaGTTCCATGAGATCTGCACA +
Preference number: 4 (lower is better)
Translates to: HVDGHSVPLLNALFSENIHKSIP*FHEICT
Trigger: TGTGCAGATCTCATGGAACCAAGGGATTGACTTGTG...AATGTTCTCCGAAAACAGGGCATTCAGAAGGGGGACCGAGTGGCCATCTACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR CCA 90 bp GGTTGTGGCTACATAGAGCATGTAGCCCCCAACTGTGTGAACCACACCCTTGGGCACAAGTCAATCCCTTaGTTCCATGAGATCAGTAAA +
Preference number: 4 (lower is better)
Translates to: GCGYIEHVAPNCVNHTLGHKSIP*FHEISK
Trigger: TTTACTGATCTCATGGAACCAAGGGATTGACTTGTG...CCCAAGGGTGTGGTTCACACAGTTGGGGGCTACATGCTCTATGTAGCCACAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475459.6
ENST00000477932.5
3UTR CAA 72 bp GCCCTGTTTTCGGAGAACATTGCTGAACTGACACACTaGGACCAGAAGCTGATGGTATGTGATCTGAGTGGT +
Preference number: 4 (lower is better)
Translates to: ALFSENIAELTH*DQKLMVCDLSG
Trigger: ACCACTCAGATCACATACCATCAGCTTCTGGTCCAAGTGTGTCAGTTCAGCAATGTTCTCCGAAAACAGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR TCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCGTAGGAATGACCAGTaGTCCAACCAATGTCTGCCG +
Preference number: 4 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVRRNDQ*SNQCLP
Trigger: CGGCAGACATTGGTTGGATCACTGGTCATTCCTACG...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp ATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCGGTCCCCCTTCTGAATaGCCTGTTTTCGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: IPFEHLTWVGEVAFSSLFGPPSE*PVFGEH
Trigger: ATGTTCTCCGAAAACAGGGCATTCAGAAGGGGGACC...GAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp ACAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAGCAAACACAATGGAGTaGAAAGCCCCAATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: TRKTSSSGPRNKTHLLLQANTME*KAPMRA
Trigger: TGCCCGCATTGGGGCTTTGCACTCCATTGTGTTTGC...TTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp TTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTTCTTTCAGTTTACCCTaGACATCTGGGCATGACCTC +
Preference number: 4 (lower is better)
Translates to: LTWVGEVAFSSLFWVLRASFSLP*TSGHDL
Trigger: GAGGTCATGCCCAGATGTGCAGGGTAAACTGAAAGA...AGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000253382.5
CDS-3UTR GCA 90 bp TCCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTCCAGAACACATCCTCTaGATGGAAGTCAAACACATA +
Preference number: 4 (lower is better)
Translates to: SFLPGSHRMLSLPGDKAGPEHIL*MEVKHI
Trigger: TATGTGTTTGACTTCCATGCAGAGGATGTGTTCTGG...ACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp GTGGCCATCACACAAGGTGACAAAGCAGTAGAGGCATTCACCCTTCACAGGATGATCTTTTCTCTAATCTaGTTCTTGAGCTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: VAITQGDKAVEAFTLHRMIFSLI*FLSSSV
Trigger: CACCGAGGAGCTCAAGAAGCAGATTAGAGAAAAGAT...CATCCTGTGAAGGGTGAATGCCTCTACTGCTTTGTCACCTTGTGTGATGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTGTTGTACCGAAGGAATaGGCCAGGGCATGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVVVPKE*ARAWSL
Trigger: AAGACTCCATGCCCTGGCCCATTCCTTCGGTACAAC...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAAGCTTTTTCTCATaGACATTTCGATCCAGTACA +
Preference number: 4 (lower is better)
Translates to: PGANGQTVLASGTKGNSDPSFFS*TFRSST
Trigger: TGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGG...GTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GATAACCTTCAGCTTCACCTTCCAACTCTTCCCCGGACTCATTCAGGATTGCAGTCACGTCCGGATATGTaGGAATCCCCTCAAACAAAA +
Preference number: 4 (lower is better)
Translates to: DNLQLHLPTLPRTHSGLQSRPDM*ESPQTK
Trigger: TTTTGTTTGAGGGGATTCCCACATATCCGGACGTGA...CTGCAATCCTGAATGAGTCCGGGGAAGAGTTGGAAGGTGAAGCTGAAGGTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTGTGCTGTGTAGAACTTaGTCACCTTGTATTTGTCCA +
Preference number: 4 (lower is better)
Translates to: PFCLAVTGCCLYLETKLVVLCRT*SPCICP
Trigger: TGGACAAATACAAGGTGACCAAGTTCTACACAGCAC...AACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTCCTGGACTCACAAATCATTGTTTTTAAGGGCAAGTGCATGCCCAATATAAGTAGAAGGTGTCCACGATaGGGCAGCGCTGGGCACCTA +
Preference number: 4 (lower is better)
Translates to: FLDSQIIVFKGKCMPNISRRCPR*GSAGHL
Trigger: TAGGTGCCCAGCGCTGCCCCATCGTGGACACCTTCT...ACTTATATTGGGCATGCACTTGCCCTTAAAAACAATGATTTGTGAGTCCAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTGGATGTAGTCTGGTGTaGCAATGGGGCCAATCTTTT +
Preference number: 4 (lower is better)
Translates to: LTWVGEVAFSSLFWVLRAGCSLV*QWGQSF
Trigger: AAAAGATTGGCCCCATTGCCACACCAGACTACATCC...AGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCCTGTCCTTTCTGCCTaGCAGTCACAGGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVPVLSA*QSQDVV
Trigger: GACAACATCCTGTGACTGCCAGGCAGAAAGGACAGG...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAAAGTCAAACACATACTTaGAGGTTGTGGCTACATAGA +
Preference number: 4 (lower is better)
Translates to: ANGQTVLASGTKGNSDPESQTHT*RLWLHR
Trigger: TCTATGTAGCCACAACCTTCAAGTATGTGTTTGACT...TTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAGTCAAACACATACTTaGAGGTTGTGGCTACATAGA +
Preference number: 4 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNSQTHT*RLWLHR
Trigger: TCTATGTAGCCACAACCTTCAAGTATGTGTTTGACT...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GAAGGTTGTGGCTACATAGAGCATGTAGCCCCCAACTGTGTGAACCACACCCTTAGTCAAACACATACTTaGAGGTTGTGGCTACATAGA +
Preference number: 4 (lower is better)
Translates to: EGCGYIEHVAPNCVNHTLSQTHT*RLWLHR
Trigger: TCTATGTAGCCACAACCTTCAAGTATGTGTTTGACT...AAGGGTGTGGTTCACACAGTTGGGGGCTACATGCTCTATGTAGCCACAACCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp AGAACTTGGTCACCTTGTATTTGTCCACAATGCTCCACAGGCGGTTCACGTCCGAGTCAAACACATACTTaGAGGTTGTGGCTACATAGA +
Preference number: 4 (lower is better)
Translates to: RTWSPCICPQCSTGGSRPSQTHT*RLWLHR
Trigger: TCTATGTAGCCACAACCTTCAAGTATGTGTTTGACT...CGGACGTGAACCGCCTGTGGAGCATTGTGGACAAATACAAGGTGACCAAGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp GGCCCTCACATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGAAACAGAGTTTCATCTaGGAATGTCTCTTATGGGCT +
Preference number: 4 (lower is better)
Translates to: GPHIPFEHLTWVGEVAFSKQSFI*ECLLWA
Trigger: AGCCCATAAGAGACATTCTCAGATGAAACTCTGTTT...CGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp CAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAAATCCCTTGGTTCCATaGGATCTGCACATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: QGRQAPLALGTKHIYSFKNPLVP*DLHIWA
Trigger: TGCCCAGATGTGCAGATCTCATGGAACCAAGGGATT...TTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360596.7
ENST00000481284.5
CDS-3UTR GCA 90 bp AAGCAACTTTATCTCCAAGCTTTTTCTCATGGACATTTCGATCCAGTACATTGTCCCAATGCGGGCACATaGCAGCATGGCCACCACAAG +
Preference number: 4 (lower is better)
Translates to: KQLYLQAFSHGHFDPVHCPNAGT*QHGHHK
Trigger: CTTGTGGTGGCCATGCTGGCATGTGCCCGCATTGGG...ACAATGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGGAGATAAAGTTGCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR GCA 90 bp ATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTCTTGCATGAGCTCATaGCACCACAAGTCAATCCCT +
Preference number: 4 (lower is better)
Translates to: IPFEHLTWVGEVAFSSLFSCMSS*HHKSIP
Trigger: AGGGATTGACTTGTGGTGGCATGAGCTCATGCAAGA...GAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp GTCCCGCTGGCAGCCATCTCCTGTAACATAGTATCCAGGAAACTTCTTAAAGTATCTTGCATGAGCTCATaGCACCACAAGTCAATCCCT +
Preference number: 4 (lower is better)
Translates to: VPLAAISCNIVSRKLLKVSCMSS*HHKSIP
Trigger: AGGGATTGACTTGTGGTGGCATGAGCTCATGCAAGA...TACTTTAAGAAGTTTCCTGGATACTATGTTACAGGAGATGGCTGCCAGCGGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TGCCGTGCACCAGAACACATCCTCTGCATGGAAGTCAAACACATACTTGAAGGTGGACTCATTCAGGATTaGAGGAGCTACACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: CRAPEHILCMEVKHILEGGLIQD*RSYTKE
Trigger: TTCTTTGGTGTAGCTCCTGCAATCCTGAATGAGTCC...ACCTTCAAGTATGTGTTTGACTTCCATGCAGAGGATGTGTTCTGGTGCACGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACCCAAGCTTTTTCTCATaGACATTTCGATCCAGTACA +
Preference number: 4 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNPSFFS*TFRSST
Trigger: TGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGG...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GAAGGTTGTGGCTACATAGAGCATGTAGCCCCCAACTGTGTGAACCACACCCTTCCAAGCTTTTTCTCATaGACATTTCGATCCAGTACA +
Preference number: 4 (lower is better)
Translates to: EGCGYIEHVAPNCVNHTLPSFFS*TFRSST
Trigger: TGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGG...AAGGGTGTGGTTCACACAGTTGGGGGCTACATGCTCTATGTAGCCACAACCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CATGTAGATGGCCACTCGGTCCCCCTTCTGAATGCCCTGTTTTCGGAGAACATTCCAAGCTTTTTCTCATaGACATTTCGATCCAGTACA +
Preference number: 4 (lower is better)
Translates to: HVDGHSVPLLNALFSENIPSFFS*TFRSST
Trigger: TGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGG...AATGTTCTCCGAAAACAGGGCATTCAGAAGGGGGACCGAGTGGCCATCTACATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR CCA 90 bp GTGGCCATCACACAAGGTGACAAAGCAGTAGAGGCATTCACCCTTCACAGGATGCCAAGCTTTTTCTCATaGACATTTCGATCCAGTACA +
Preference number: 4 (lower is better)
Translates to: VAITQGDKAVEAFTLHRMPSFFS*TFRSST
Trigger: TGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGG...CATCCTGTGAAGGGTGAATGCCTCTACTGCTTTGTCACCTTGTGTGATGGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CTTTATCTCCAAGCTTTTTCTCATGGACATTTCGATCCAGTACATTGTAGCAGACTGAGTGGTCTCCCCTaGCTCATTGCCCTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: LYLQAFSHGHFDPVHCSRLSGLP*LIALPV
Trigger: TACTGGGAGGGCAATGAGCCAGGGGAGACCACTCAG...TCTGCTACAATGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGGAGATAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR CCA 90 bp AGCAACTTTATCTCCAAGCTTTTTCTCATGGACATTTCGATCCAGTACATTGTAGGGCACATGCCAGCATaGCCACCACAAGCTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SNFISKLFLMDISIQYIVGHMPA*PPQALG
Trigger: TCCCAGAGCTTGTGGTGGCCATGCTGGCATGTGCCC...TACAATGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGGAGATAAAGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR CCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCACAAGTCAATCCCTTaGTTCCATGAGATCTGGGGC +
Preference number: 4 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVHKSIP*FHEIWG
Trigger: GCCCCAGATCTCATGGAACCAAGGGATTGACTTGTG...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000253382.5
CDS-3UTR CCA 90 bp TTCCTGGACTCACAAATCATTGTTTTTAAGGGCAAGTGCATGCCCAATATAAGTGGCACCATTGGCCAGTaGCCCATAGGTGACGTAGGA +
Preference number: 4 (lower is better)
Translates to: FLDSQIIVFKGKCMPNISGTIGQ*PIGDVG
Trigger: TCCTACGTCACCTATGGGCCACTGGCCAATGGTGCC...ACTTATATTGGGCATGCACTTGCCCTTAAAAACAATGATTTGTGAGTCCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCCTCAAACAAAACACTaGTGGCACCATTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVPQTKH*WHHWPV
Trigger: CACTGGCCAATGGTGCCACCAGTGTTTTGTTTGAGG...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTTCACGTCCGGATATGTaGGAATCCCCTCAAACAAAA +
Preference number: 4 (lower is better)
Translates to: LTWVGEVAFSSLFWVLRASRPDM*ESPQTK
Trigger: TTTTGTTTGAGGGGATTCCCACATATCCGGACGTGA...AGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTCCTGGACTCACAAATCATTGTTTTTAAGGGCAAGTGCATGCCCAATATAAGTCAAGGGAGGGTAGTGTaGGTCAACACTGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: FLDSQIIVFKGKCMPNISQGRVV*VNTGPQ
Trigger: CTGAGGGCCAGTGTTGACCCACACTACCCTCCCTTG...ACTTATATTGGGCATGCACTTGCCCTTAAAAACAATGATTTGTGAGTCCAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CTGGCAGCCATCTCCTGTAACATAGTATCCAGGAAACTTCTTAAAGTAGGTTGTCCTGTCCTTTCTGCCTaGCAGTCACAGGATGTTGTC +
Preference number: 4 (lower is better)
Translates to: LAAISCNIVSRKLLKVGCPVLSA*QSQDVV
Trigger: GACAACATCCTGTGACTGCCAGGCAGAAAGGACAGG...ACAACCTACTTTAAGAAGTTTCCTGGATACTATGTTACAGGAGATGGCTGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GGCCCTCACATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTTTGAACACTTAACTTaGGTAGGAGAGGTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GPHIPFEHLTWVGEVAFSFEHLT*VGEVAF
Trigger: AAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA...CGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTGTGGCTACATAGAGCATGTAGCCCCCAACTGTGTGAACCACACCCTTGGGTTTTTGAACACTTAACTTaGGTAGGAGAGGTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LWLHRACSPQLCEPHPWVFEHLT*VGEVAF
Trigger: AAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA...AACCCAAGGGTGTGGTTCACACAGTTGGGGGCTACATGCTCTATGTAGCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCATCAATCCTGCCAGTaGTCCAGTAATAGCCATCCT +
Preference number: 4 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVHQSCQ*SSNSHP
Trigger: AGGATGGCTATTACTGGATCACTGGCAGGATTGATG...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp ACAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAGGTGTCCAGATACATTaGGCATGTCATCAATCCTGC +
Preference number: 4 (lower is better)
Translates to: TRKTSSSGPRNKTHLLLQGVQIH*ACHQSC
Trigger: GCAGGATTGATGACATGCTCAATGTATCTGGACACC...TTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TACATTGTAGCAGATGTTGGTAGTTGCTCCTTTCATCCACTCAATGAAGATTTTAGTGCAAAGCCCCAATaGGGGCACATGCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: YIVADVGSCSFHPLNEDFSAKPQ*GHMPAW
Trigger: CCATGCTGGCATGTGCCCGCATTGGGGCTTTGCACT...AAAATCTTCATTGAGTGGATGAAAGGAGCAACTACCAACATCTGCTACAATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR GCA 90 bp AACTTTATCTCCAAGCTTTTTCTCATGGACATTTCGATCCAGTACATTGTAGCAAGTGCAAAGCCCCAATaGGGGCACATGCCAGCATGG +
Preference number: 4 (lower is better)
Translates to: NFISKLFLMDISIQYIVASAKPQ*GHMPAW
Trigger: CCATGCTGGCATGTGCCCGCATTGGGGCTTTGCACT...TGCTACAATGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGGAGATAAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR GCA 90 bp ATTGCCCTCCCAGTAAAAAGCAACTTTATCTCCAAGCTTTTTCTCATGGACATTCCTACCACAATGGAGTaGAAAGCCCCAATGCGGGCA +
Preference number: 4 (lower is better)
Translates to: IALPVKSNFISKLFLMDIPTTME*KAPMRA
Trigger: TGCCCGCATTGGGGCTTTGCACTCCATTGTGGTAGG...AATGTCCATGAGAAAAAGCTTGGAGATAAAGTTGCTTTTTACTGGGAGGGCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000480274.1
CDS-3UTR CCA 90 bp AAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGAAGCGAATGGGCCAGGGCATaGAGTCTTCCAGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: KTSSSGPRNKTHLLLQRSEWARA*SLPVKF
Trigger: GAATTTTACTGGAAGACTCCATGCCCTGGCCCATTC...GCTTCTTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAAACACATCCTCTGCATaGAAGTCAAACACATACTTG +
Preference number: 4 (lower is better)
Translates to: QWADSTGIWHKREFRPRTNTSSA*KSNTYL
Trigger: CAAGTATGTGTTTGACTTCCATGCAGAGGATGTGTT...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGTGACTGATGACAGATaGGTCAGCCACAGTAGACAT +
Preference number: 4 (lower is better)
Translates to: QGRQAPLALGTKHIYSFKVTDDR*VSHSRH
Trigger: ATGTCTACTGTGGCTGACCCATCTGTCATCAGTCAC...TTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTTTTTCGTCTCTGTTCTaGGTTCTGAGAGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVFSSLF*VLRALQ
Trigger: CTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAA...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp GTAAAAAGCAACTTTATCTCCAAGCTTTTTCTCATGGACATTTCGATCCAGTACAGCCCCTGGAGCCAATaGGCAGACAGTACTGGCATC +
Preference number: 4 (lower is better)
Translates to: VKSNFISKLFLMDISIQYSPWSQ*ADSTGI
Trigger: GATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCT...GTACTGGATCGAAATGTCCATGAGAAAAAGCTTGGAGATAAAGTTGCTTTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR CCA 90 bp ATTTCGATCCAGTACATTGTAGCAGATGTTGGTAGTTGCTCCTTTCATCCACTCGGGCTTGAGCCTGACTaGGGCAAGAAAACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: ISIQYIVADVGSCSFHPLGLEPD*GKKTEF
Trigger: AAACTCTGTTTTCTTGCCCCAGTCAGGCTCAAGCCC...GAGTGGATGAAAGGAGCAACTACCAACATCTGCTACAATGTACTGGATCGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR TCA 90 bp CAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAACTTCAAAGAAGCAGATaGTCTGAATACCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: QGRQAPLALGTKHIYSFKLQRSR*SEYPLE
Trigger: CTCCAGAGGGTATTCAGATCATCTGCTTCTTTGAAG...TTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp AACTTTATCTCCAAGCTTTTTCTCATGGACATTTCGATCCAGTACATTGTAGCAACTGTGCCTAACACCTaGAAGGATGCCCGGCTATGC +
Preference number: 4 (lower is better)
Translates to: NFISKLFLMDISIQYIVATVPNT*KDARLC
Trigger: GCATAGCCGGGCATCCTTGCAGGTGTTAGGCACAGT...TGCTACAATGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGGAGATAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR GCA 90 bp CTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCGTTTTTAAGGGCAAGTaGATGCCCAATATAAGTACT +
Preference number: 4 (lower is better)
Translates to: LNLGRRGSLFVSVLGSESVFKGK*MPNIST
Trigger: AGTACTTATATTGGGCATGCACTTGCCCTTAAAAAC...GCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp AACTTTATCTCCAAGCTTTTTCTCATGGACATTTCGATCCAGTACATTGTAGCAGAAGCTGATGGTATGTaGTCTGAGTGGTCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: NFISKLFLMDISIQYIVAEADGM*SEWSPL
Trigger: CAGGGGAGACCACTCAGATCACATACCATCAGCTTC...TGCTACAATGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGGAGATAAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR TCA 90 bp GTCCCGCTGGCAGCCATCTCCTGTAACATAGTATCCAGGAAACTTCTTAAAGTAAAACAGAGTTTCATCTaGGAATGTCTCTTATGGGCT +
Preference number: 4 (lower is better)
Translates to: VPLAAISCNIVSRKLLKVKQSFI*ECLLWA
Trigger: AGCCCATAAGAGACATTCTCAGATGAAACTCTGTTT...TACTTTAAGAAGTTTCCTGGATACTATGTTACAGGAGATGGCTGCCAGCGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp GGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGAACCAGAACACATCCTCTaGATGGAAGTCAAACACATA +
Preference number: 4 (lower is better)
Translates to: GRQAPLALGTKHIYSFKEPEHIL*MEVKHI
Trigger: TATGTGTTTGACTTCCATGCAGAGGATGTGTTCTGG...TTCTTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTATCTTTTCTCTAATCTaGTTCTTGAGCTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVIFSLI*FLSSSV
Trigger: CACCGAGGAGCTCAAGAAGCAGATTAGAGAAAAGAT...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp ATTGCCCTCCCAGTAAAAAGCAACTTTATCTCCAAGCTTTTTCTCATGGACATTATAGGATTACACAGCTaGCTCCCTGCTTCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: IALPVKSNFISKLFLMDIIGLHS*LPASVE
Trigger: CTCCACTGAAGCAGGGAGGCAGCTGTGTAATCCTAT...AATGTCCATGAGAAAAAGCTTGGAGATAAAGTTGCTTTTTACTGGGAGGGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR CCA 90 bp TTCCTGGACTCACAAATCATTGTTTTTAAGGGCAAGTGCATGCCCAATATAAGTATGGGCAGACAGTACTaGCATCTGGCACAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: FLDSQIIVFKGKCMPNISMGRQY*HLAQKG
Trigger: TCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCAT...ACTTATATTGGGCATGCACTTGCCCTTAAAAACAATGATTTGTGAGTCCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR TCA 90 bp AACTTTATCTCCAAGCTTTTTCTCATGGACATTTCGATCCAGTACATTGTAGCAAATCCCTTGGTTCCATaGGATCTGCACATCTGGGCA +
Preference number: 4 (lower is better)
Translates to: NFISKLFLMDISIQYIVANPLVP*DLHIWA
Trigger: TGCCCAGATGTGCAGATCTCATGGAACCAAGGGATT...TGCTACAATGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGGAGATAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR GCA 90 bp GTAAAAAGCAACTTTATCTCCAAGCTTTTTCTCATGGACATTTCGATCCAGTACGGTCCCCCTTCTGAATaGCCTGTTTTCGGAGAACAT +
Preference number: 4 (lower is better)
Translates to: VKSNFISKLFLMDISIQYGPPSE*PVFGEH
Trigger: ATGTTCTCCGAAAACAGGGCATTCAGAAGGGGGACC...GTACTGGATCGAAATGTCCATGAGAAAAAGCTTGGAGATAAAGTTGCTTTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR GCA 90 bp TTTCTCATGGACATTTCGATCCAGTACATTGTAGCAGATGTTGGTAGTTGCTCCCCAGAACACATCCTCTaGATGGAAGTCAAACACATA +
Preference number: 4 (lower is better)
Translates to: FLMDISIQYIVADVGSCSPEHIL*MEVKHI
Trigger: TATGTGTTTGACTTCCATGCAGAGGATGTGTTCTGG...GGAGCAACTACCAACATCTGCTACAATGTACTGGATCGAAATGTCCATGAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR CCA 90 bp AAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGAAGCTTTGAACACTTAACTTaGGTAGGAGAGGTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: KTSSSGPRNKTHLLLQRSFEHLT*VGEVAF
Trigger: AAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA...GCTTCTTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp CAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAACACAAGTCAATCCCTTaGTTCCATGAGATCAGTAAA +
Preference number: 4 (lower is better)
Translates to: QGRQAPLALGTKHIYSFKHKSIP*FHEISK
Trigger: TTTACTGATCTCATGGAACCAAGGGATTGACTTGTG...TTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477932.5
CDS-3UTR TCA 90 bp TTCCTGGACTCACAAATCATTGTTTTTAAGGGCAAGTGCATGCCCAATATAAGTCTTCAAAGAAGCAGATaGTCTGAATACCCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: FLDSQIIVFKGKCMPNISLQRSR*SEYPLE
Trigger: CTCCAGAGGGTATTCAGATCATCTGCTTCTTTGAAG...ACTTATATTGGGCATGCACTTGCCCTTAAAAACAATGATTTGTGAGTCCAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp TTCCTGGACTCACAAATCATTGTTTTTAAGGGCAAGTGCATGCCCAATATAAGTGGACTCATTCAGGATTaGAGGAGCTACACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: FLDSQIIVFKGKCMPNISGLIQD*RSYTKE
Trigger: TTCTTTGGTGTAGCTCCTGCAATCCTGAATGAGTCC...ACTTATATTGGGCATGCACTTGCCCTTAAAAACAATGATTTGTGAGTCCAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp CCAGTAAAAAGCAACTTTATCTCCAAGCTTTTTCTCATGGACATTTCGATCCAGGGACTCATTCAGGATTaGAGGAGCTACACCAAAGAA +
Preference number: 4 (lower is better)
Translates to: PVKSNFISKLFLMDISIQGLIQD*RSYTKE
Trigger: TTCTTTGGTGTAGCTCCTGCAATCCTGAATGAGTCC...CTGGATCGAAATGTCCATGAGAAAAAGCTTGGAGATAAAGTTGCTTTTTACTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR GCA 90 bp AACTTTATCTCCAAGCTTTTTCTCATGGACATTTCGATCCAGTACATTGTAGCATTTAGGCAAGCCAGGTaGATTCTGGATGTAGTCTGG +
Preference number: 4 (lower is better)
Translates to: NFISKLFLMDISIQYIVAFRQAR*ILDVVW
Trigger: CCAGACTACATCCAGAATGCACCTGGCTTGCCTAAA...TGCTACAATGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGGAGATAAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR GCA 90 bp TTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTGTTTTTAAGGGCAAGTaGATGCCCAATATAAGTACT +
Preference number: 4 (lower is better)
Translates to: FEHLTWVGEVAFSSLFWVVFKGK*MPNIST
Trigger: AGTACTTATATTGGGCATGCACTTGCCCTTAAAAAC...AACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp ACAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAGTTTTTAAGGGCAAGTaGATGCCCAATATAAGTACT +
Preference number: 4 (lower is better)
Translates to: TRKTSSSGPRNKTHLLLQVFKGK*MPNIST
Trigger: AGTACTTATATTGGGCATGCACTTGCCCTTAAAAAC...TTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR GCA 90 bp AAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAAGAAGCGTTTTTAAGGGCAAGTaGATGCCCAATATAAGTACT +
Preference number: 4 (lower is better)
Translates to: KTSSSGPRNKTHLLLQRSVFKGK*MPNIST
Trigger: AGTACTTATATTGGGCATGCACTTGCCCTTAAAAAC...GCTTCTTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CCA 90 bp TACATTGTAGCAGATGTTGGTAGTTGCTCCTTTCATCCACTCAATGAAGATTTTGAATGGGCCAGGGCATaGAGTCTTCCAGTAAAATTC +
Preference number: 4 (lower is better)
Translates to: YIVADVGSCSFHPLNEDFEWARA*SLPVKF
Trigger: GAATTTTACTGGAAGACTCCATGCCCTGGCCCATTC...AAAATCTTCATTGAGTGGATGAAAGGAGCAACTACCAACATCTGCTACAATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR CCA 90 bp GTAAAAAGCAACTTTATCTCCAAGCTTTTTCTCATGGACATTTCGATCCAGTACATTCTGGATGTAGTCTaGTGTGGCAATGGGGCCAAT +
Preference number: 4 (lower is better)
Translates to: VKSNFISKLFLMDISIQYILDVV*CGNGAN
Trigger: ATTGGCCCCATTGCCACACCAGACTACATCCAGAAT...GTACTGGATCGAAATGTCCATGAGAAAAAGCTTGGAGATAAAGTTGCTTTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS-3UTR GCA 90 bp TACATTGTAGCAGATGTTGGTAGTTGCTCCTTTCATCCACTCAATGAAGATTTTATCTTTTCTCTAATCTaGTTCTTGAGCTCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: YIVADVGSCSFHPLNEDFIFSLI*FLSSSV
Trigger: CACCGAGGAGCTCAAGAAGCAGATTAGAGAAAAGAT...AAAATCTTCATTGAGTGGATGAAAGGAGCAACTACCAACATCTGCTACAATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481284.5
CDS TCA 90 bp GCAGCTCGCGGTAGCGCTGCAGCGAGGGGACGTGCGCGGAGCGGCTaGCCTCGGGCGGCGGAGACCAACTCCGCGCCCGGCCTCCGGCTC +
Preference number: 5 (lower is better)
Translates to: AARGSAAARGRARSG*PRAAETNSAPGLRL
Trigger: GAGCCGGAGGCCGGGCGCGGAGTTGGTCTCCGCCGCCCGAGGTCAGCCGCTCCGCGCACGTCCCCTCGCTGCAGCGCTACCGCGAGCTGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000467019.5
ENST00000473172.5
ENST00000476922.5
ENST00000477932.5
ENST00000480978.5
ENST00000484354.1
ENST00000493805.6
CDS-3UTR CAA 90 bp GAAGAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGCCTCCTACAACCACAGGGCTaGAGCCTGACTGGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: EEWVLGITPLGLTLIPCLLQPQG*SLTGAR
Trigger: TCTTGCCCCAGTCAGGCTCAAGCCCTGTGGTTGTAG...GAGGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp TCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAACCACACCCTTGGGTTaGCCTGTGGAGCCACTGGTG +
Preference number: 5 (lower is better)
Translates to: SAHTAPGANGQTVLASGTTTPLG*PVEPLV
Trigger: CACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGGT...TGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATGAAGAGTGGGTCCTCGGCACCACACCCTTGGGTTaGCCTGTGGAGCCACTGGTG +
Preference number: 5 (lower is better)
Translates to: LGFACGATGVQDEEWVLGTTPLG*PVEPLV
Trigger: CACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGGT...GCCGAGGACCCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS CCA 90 bp ACCGAAGGAATGGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCTTaGCAATGTCTCCCCAGAATTCCCGCGGCTCCTCCACGGAGCGCC +
Preference number: 5 (lower is better)
Translates to: TEGMGQGMESSSKIP*QCLPRIPAAPPRSA
Trigger: GGCGCTCCGTGGAGGAGCCGCGGGAATTCTGGGGAGACATTGCCAAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCATTCCTTCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000467019.5
ENST00000473172.5
ENST00000476922.5
ENST00000477932.5
ENST00000480978.5
ENST00000493805.6
CDS-3UTR CAA 90 bp CCTCTGGAGACTGAATCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTAACCACACCCTTGGGTTaGCCTGTGGAGCCACTGGTG +
Preference number: 5 (lower is better)
Translates to: PLETESAHTAPGANGQTVTTPLG*PVEPLV
Trigger: CACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGGT...TACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGATTCAGTCTCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS CCA 90 bp TGTCTCAAAGCGTTCGTGGTTCCCATAGACTGTGCGCATGATCCCTaGCCAGGGCTGCTTGAACACCTGGGGAGTGAGGAAGGGACAGTG +
Preference number: 5 (lower is better)
Translates to: CLKAFVVPIDCAHDP*PGLLEHLGSEEGTV
Trigger: CACTGTCCCTTCCTCACTCCCCAGGTGTTCAAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACGAACGCTTTGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494727.1
CDS-3UTR CAA 90 bp CCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGCTACAACCACAGGGCTaGAGCCTGACTGGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: PIQPLEPMGRQYWHLAQKLQPQG*SLTGAR
Trigger: TCTTGCCCCAGTCAGGCTCAAGCCCTGTGGTTGTAG...CTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS TCA 90 bp ATAGGGCCCTTCCTGAGTAGGCCTCTTAACTCTGGCTCTTCCAGCTaGTTCGAGCTGACAGAGGGTCAGCTGAGGTGGGACCAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: IGPFLSRPLNSGSSS*FELTEGQLRWDQER
Trigger: TCTCTCCTGGTCCCACCTCAGCTGACCCTCTGTCAGCTCGAATCAGCTGGAAGAGCCAGAGTTAAGAGGCCTACTCAGGAAGGGCCCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493250.1
CDS CCA 90 bp ACCGAAGGAATGGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCTTaGCAATGTCTCCCCAGAATTCTCGGGCGGCGGAGACCAACTCCG +
Preference number: 5 (lower is better)
Translates to: TEGMGQGMESSSKIP*QCLPRILGRRRPTP
Trigger: CGGAGTTGGTCTCCGCCGCCCGAGAATTCTGGGGAGACATTGCCAAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCATTCCTTCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480274.1
CDS-3UTR CAA 90 bp AGACATGTCCCCGAGGTCATGGTCATTCTGAGCAATCTTCCGAAGCACTCGCCTACCACACCCTTGGGTTaGCCTGTGGAGCCACTGGTG +
Preference number: 5 (lower is better)
Translates to: RHVPEVMVILSNLPKHSPTTPLG*PVEPLV
Trigger: CACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGGT...AGGCGAGTGCTTCGGAAGATTGCTCAGAATGACCATGACCTCGGGGACATGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp TGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCAAGCCAGGCCTCAGGGTaGATGGGTTCACCCACTGTG +
Preference number: 5 (lower is better)
Translates to: WQSQDVVSTWRQSWFPVPSQASG*MGSPTV
Trigger: CACAGTGGGTGAACCCATCAACCCTGAGGCCTGGCT...TGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp AAAGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACCACAGCTGCGCCACCTGTCTCTGTTaGCCAGAAGGTGTCCACGAT +
Preference number: 5 (lower is better)
Translates to: KAVEAFTLHRMRVAHHSCATCLC*PEGVHD
Trigger: ATCGTGGACACCTTCTGGCAAACAGAGACAGGTGGC...GCAGCTGTGGTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp ATGAAGAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGCCTCTCTAATCTGCTTCTaGAGCTCCTCGGTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: MKSGSSASHHSGSHSSPASLICF*SSSVSL
Trigger: CAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGA...GGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CCGGGTTTCATGGGTGTGGCACCAGGAAGGGGAGTCAACATGTGGCCACCTGTCTCTCTAATCTGCTTCTaGAGCTCCTCGGTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: PGFMGVAPGRGVNMWPPVSLICF*SSSVSL
Trigger: CAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGA...GACAGGTGGCCACATGTTGACTCCCCTTCCTGGTGCCACACCCATGAAACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS TCA 90 bp CGGCATCACACCACTCGGGCTCACACTCATCCCCTGCCTCTTGCATaGGCTCATGCCACCACAAGTCAATCCCTTGGTTCCATGAGATCA +
Preference number: 5 (lower is better)
Translates to: RHHTTRAHTHPLPLA*AHATTSQSLGSMRS
Trigger: TGATCTCATGGAACCAAGGGATTGACTTGTGGTGGCATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475459.6
ENST00000477932.5
CDS-3UTR CAA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGCTCATCCCCTGCCTCTaGCATGAGCTCATGCCACCA +
Preference number: 5 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPLIPCL*HELMPP
Trigger: TGGTGGCATGAGCTCATGCAAGAGGCAGGGGATGAG...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp TGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGTCCCACTCATCCCCTGCCTCTaGCATGAGCTCATGCCACCA +
Preference number: 5 (lower is better)
Translates to: WQSQDVVSTWRQSWFPVPLIPCL*HELMPP
Trigger: TGGTGGCATGAGCTCATGCAAGAGGCAGGGGATGAG...TGGGACCGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp TCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTTCCGGATGCCCGGCTATGCTaGGTGACAGGCTCATCTCCA +
Preference number: 5 (lower is better)
Translates to: SAWQSQDVVSTWRQSWFPDARLC*VTGSSP
Trigger: TGGAGATGAGCCTGTCACCAAGCATAGCCGGGCATC...CGGAAACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp GATATGTGGGAATCCCCTCAAACAAAACACTGGTGGCACCATTGGCCAGTGGCCGATGCCCGGCTATGCTaGGTGACAGGCTCATCTCCA +
Preference number: 5 (lower is better)
Translates to: DMWESPQTKHWWHHWPVADARLC*VTGSSP
Trigger: TGGAGATGAGCCTGTCACCAAGCATAGCCGGGCATC...GGCCACTGGCCAATGGTGCCACCAGTGTTTTGTTTGAGGGGATTCCCACATATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGCCATCACACAAGGTCCTGGCCAGGGCTGCTaGAACACCAGTAAAAAGCAA +
Preference number: 5 (lower is better)
Translates to: LLELLGELGAEGVAITQGPGQGC*NTSKKQ
Trigger: TTGCTTTTTACTGGTGTTCAAGCAGCCCTGGCCAGG...ACCTTGTGTGATGGCCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480978.5
CDS GCA 90 bp GAAGCCTGCAAACACAATGGAGTGCAAAGCCCCAATGCGGGCACATaGCAGCATGGCCACCACAAGCTTTCGGAGAACATTGCTGAACTG +
Preference number: 5 (lower is better)
Translates to: EACKHNGVQSPNAGT*QHGHHKLSENIAEL
Trigger: CAGTTCAGCAATGTTCTCCGAAAGCTTGTGGTGGCCATGCTGGCATGTGCCCGCATTGGGGCTTTGCACTCCATTGTGTTTGCAGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464399.2
CDS-3UTR CAA 90 bp CCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTGATGCCCGGCTATGCTaGGTGACAGGCTCATCTCCA +
Preference number: 5 (lower is better)
Translates to: PFCLAVTGCCLYLETKLVDARLC*VTGSSP
Trigger: TGGAGATGAGCCTGTCACCAAGCATAGCCGGGCATC...AACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CTTTTCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGATGCCCGGCTATGCTaGGTGACAGGCTCATCTCCA +
Preference number: 5 (lower is better)
Translates to: LFSNLLLELLGELGAEGVDARLC*VTGSSP
Trigger: TGGAGATGAGCCTGTCACCAAGCATAGCCGGGCATC...CACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACAAGCCAGGCCTCAGGGTaGATGGGTTCACCCACTGTG +
Preference number: 5 (lower is better)
Translates to: QWADSTGIWHKREFRPRTSQASG*MGSPTV
Trigger: CACAGTGGGTGAACCCATCAACCCTGAGGCCTGGCT...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp GGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTCTGCAGTCTGGAGCCACCTGTCTCTGTTaGCCAGAAGGTGTCCACGAT +
Preference number: 5 (lower is better)
Translates to: GEVAFSSLFWVLRALQSGATCLC*PEGVHD
Trigger: ATCGTGGACACCTTCTGGCAAACAGAGACAGGTGGC...TCCAGACTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp GATGAAGAGTGGGTCCTCGGCATCACACCACTCGGGCTCACACTCATCCCCTGCAGGTGTCCAGATACATaGAGCATGTCATCAATCCTG +
Preference number: 5 (lower is better)
Translates to: DEEWVLGITPLGLTLIPCRCPDT*SMSSIL
Trigger: CAGGATTGATGACATGCTCAATGTATCTGGACACCT...GCAGGGGATGAGTGTGAGCCCGAGTGGTGTGATGCCGAGGACCCACTCTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGCAGTCACAGGATGTaGTCTCTACCTGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: PIQPLEPMGRQYWHLAQKGSHRM*SLPGDK
Trigger: TTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCC...CTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CTTTTCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGCTACAACCACAGGGCTaGAGCCTGACTGGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: LFSNLLLELLGELGAEGVLQPQG*SLTGAR
Trigger: TCTTGCCCCAGTCAGGCTCAAGCCCTGTGGTTGTAG...CACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS GCA 90 bp ACTCTGAAGAGAAGCCTGCAAACACAATGGAGTGCAAAGCCCCAATaGGGGCACATGCCAGCATGGCCACCACAAGCTTTCGGAGAACAT +
Preference number: 5 (lower is better)
Translates to: TLKRSLQTQWSAKPQ*GHMPAWPPQAFGEH
Trigger: ATGTTCTCCGAAAGCTTGTGGTGGCCATGCTGGCATGTGCCCGCATTGGGGCTTTGCACTCCATTGTGTTTGCAGGCTTCTCTTCAGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464399.2
CDS-3UTR CAA 90 bp CTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATGAAGAGTGGGTCCTCGGCTTAGTCACATCAAAGTaGTACCGAAGGAATGGGCCA +
Preference number: 5 (lower is better)
Translates to: LGFACGATGVQDEEWVLGLVTSK*YRRNGP
Trigger: TGGCCCATTCCTTCGGTACAACTTTGATGTGACTAA...GCCGAGGACCCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACGCCACCTGTCTCTGTTaGCCAGAAGGTGTCCACGAT +
Preference number: 5 (lower is better)
Translates to: PMGRQYWHLAQKGIQTQNATCLC*PEGVHD
Trigger: ATCGTGGACACCTTCTGGCAAACAGAGACAGGTGGC...GTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp GCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAAGCCACCTGTCTCTGTTaGCCAGAAGGTGTCCACGAT +
Preference number: 5 (lower is better)
Translates to: ANGQTVLASGTKGNSDPEATCLC*PEGVHD
Trigger: ATCGTGGACACCTTCTGGCAAACAGAGACAGGTGGC...TTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CAAGGTGACAAAGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACTCTCTAATCTGCTTCTaGAGCTCCTCGGTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: QGDKAVEAFTLHRMRVAHSLICF*SSSVSL
Trigger: CAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGA...GTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCTTTGTCACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTGGCAGTCACAGGATGTaGTCTCTACCTGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: QPLEPMGRQYWHLAQKGIGSHRM*SLPGDK
Trigger: TTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCC...AATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS TCA 90 bp CTCCACAGGCGGTTCACGTCCGGATATGTGGGAATCCCCTCAAACTaGCCCATGAAGGCTGGTCATTCCCAGTCTTTCCTAATAGTCCTT +
Preference number: 5 (lower is better)
Translates to: LHRRFTSGYVGIPSN*PMKAGHSQSFLIVL
Trigger: AAGGACTATTAGGAAAGACTGGGAATGACCAGCCTTCATGGGTCAGTTTGAGGGGATTCCCACATATCCGGACGTGAACCGCCTGTGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490464.1
CDS GCA 90 bp CACCACTCGGGCTCACACTCATCCCCTGCCTCTTGCATGAGCTCATaGCACCACAAGTCAATCCCTTGGTTCCATGAGATCAGTAAAAAG +
Preference number: 5 (lower is better)
Translates to: HHSGSHSSPASCMSS*HHKSIPWFHEISKK
Trigger: CTTTTTACTGATCTCATGGAACCAAGGGATTGACTTGTGGTGGCATGAGCTCATGCAAGAGGCAGGGGATGAGTGTGAGCCCGAGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475459.6
ENST00000477932.5
CDS CCA 90 bp ACCGAAGGAATGGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCTTaGCAATGTCTCCCCAGAATTCTGTGTGCCAGCTGCAGGCTGATA +
Preference number: 5 (lower is better)
Translates to: TEGMGQGMESSSKIP*QCLPRILCASCRLI
Trigger: TATCAGCCTGCAGCTGGCACACAGAATTCTGGGGAGACATTGCCAAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCATTCCTTCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481971.5
CDS-3UTR CAA 90 bp ACCACACCCTTGGGTTTGCCTGTGGAGCCACTGGTGTACAGGATGAAGAGTGGGTTAGTCACATCAAAGTaGTACCGAAGGAATGGGCCA +
Preference number: 5 (lower is better)
Translates to: TTPLGLPVEPLVYRMKSGLVTSK*YRRNGP
Trigger: TGGCCCATTCCTTCGGTACAACTTTGATGTGACTAA...CCCACTCTTCATCCTGTACACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp GGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGCTGAACTGACACACTaGGACCAGAAGCTGATGGTA +
Preference number: 5 (lower is better)
Translates to: GANGQTVLASGTKGNSDPAELTH*DQKLMV
Trigger: TACCATCAGCTTCTGGTCCAAGTGTGTCAGTTCAGC...TGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CAA 90 bp GCATGTAGATGGCCACTCGGTCCCCCTTCTGAATGCCCTGTTTTCGGAGAACATGCTGAACTGACACACTaGGACCAGAAGCTGATGGTA +
Preference number: 5 (lower is better)
Translates to: ACRWPLGPPSECPVFGEHAELTH*DQKLMV
Trigger: TACCATCAGCTTCTGGTCCAAGTGTGTCAGTTCAGC...ATGTTCTCCGAAAACAGGGCATTCAGAAGGGGGACCGAGTGGCCATCTACATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS-3UTR CAA 90 bp CCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGAGGTGTCCAGATACATaGAGCATGTCATCAATCCTG +
Preference number: 5 (lower is better)
Translates to: PIQPLEPMGRQYWHLAQKRCPDT*SMSSIL
Trigger: CAGGATTGATGACATGCTCAATGTATCTGGACACCT...CTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp GGGCTTCCTAAGAGAGCTGACATAGGATTACACAGCTGCCTCCCTGCTTCAGTGGGCAGTCACAGGATGTaGTCTCTACCTGGAGACAAA +
Preference number: 5 (lower is better)
Translates to: GLPKRADIGLHSCLPASVGSHRM*SLPGDK
Trigger: TTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCC...CACTGAAGCAGGGAGGCAGCTGTGTAATCCTATGTCAGCTCTCTTAGGAAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS TCA 90 bp GATCCAATCTGTGCCTTAAGAGAAGTTCCCCACAGCCAGGGATTGTaGGAAGCAGAGGGTCTGGGAGAAGCGGAGAATCTCTTCATGTCT +
Preference number: 5 (lower is better)
Translates to: DPICALREVPHSQGL*EAEGLGEAENLFMS
Trigger: AGACATGAAGAGATTCTCCGCTTCTCCCAGACCCTCTGCTTCTCACAATCCCTGGCTGTGGGGAACTTCTCTTAAGGCACAGATTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490046.1
CDS CCA 90 bp ACCGAAGGAATGGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCTTaGCAATGTCTCCCCAGAATTCACAAAGAAGTGCCCACCTCACCA +
Preference number: 5 (lower is better)
Translates to: TEGMGQGMESSSKIP*QCLPRIHKEVPTSP
Trigger: TGGTGAGGTGGGCACTTCTTTGTGAATTCTGGGGAGACATTGCCAAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCATTCCTTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000475459.6
ENST00000488172.5
CDS CCA 90 bp ACCGAAGGAATGGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCTTaGCAATGTCTCCCCAGAATTCTGCACTCACCACAAAGAAGTGCC +
Preference number: 5 (lower is better)
Translates to: TEGMGQGMESSSKIP*QCLPRILHSPQRSA
Trigger: GGCACTTCTTTGTGGTGAGTGCAGAATTCTGGGGAGACATTGCCAAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCATTCCTTCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481284.5
ENST00000497927.5
CDS-3UTR CAA 90 bp CAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTTTAGTCACATCAAAGTaGTACCGAAGGAATGGGCCA +
Preference number: 5 (lower is better)
Translates to: QPLEPMGRQYWHLAQKGILVTSK*YRRNGP
Trigger: TGGCCCATTCCTTCGGTACAACTTTGATGTGACTAA...AATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CCTTTCTGCCTGGCAGTCACAGGATGTTGTCTCTACCTGGAGACAAAGCTGGTTGCTGAACTGACACACTaGGACCAGAAGCTGATGGTA +
Preference number: 5 (lower is better)
Translates to: PFCLAVTGCCLYLETKLVAELTH*DQKLMV
Trigger: TACCATCAGCTTCTGGTCCAAGTGTGTCAGTTCAGC...AACCAGCTTTGTCTCCAGGTAGAGACAACATCCTGTGACTGCCAGGCAGAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000481284.5
CDS-3UTR CAA 90 bp GTCAAACACATACTTGAAGGTTGTGGCTACATAGAGCATGTAGCCCCCAACTGTCTCATCCCCTGCCTCTaGCATGAGCTCATGCCACCA +
Preference number: 5 (lower is better)
Translates to: VKHILEGCGYIEHVAPNCLIPCL*HELMPP
Trigger: TGGTGGCATGAGCTCATGCAAGAGGCAGGGGATGAG...ACAGTTGGGGGCTACATGCTCTATGTAGCCACAACCTTCAAGTATGTGTTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000475459.6
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp ACAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAACCACACCCTTGGGTTaGCCTGTGGAGCCACTGGTG +
Preference number: 5 (lower is better)
Translates to: TRKTSSSGPRNKTHLLLQTTPLG*PVEPLV
Trigger: CACCAGTGGCTCCACAGGCAAACCCAAGGGTGTGGT...TTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp GGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTCTGCAGTCTGGATTGGTCACCTTGTATTaGTCCACAATGCTCCACAGG +
Preference number: 5 (lower is better)
Translates to: GEVAFSSLFWVLRALQSGLVTLY*STMLHR
Trigger: CCTGTGGAGCATTGTGGACAAATACAAGGTGACCAA...TCCAGACTGCAGAGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp TCCACAGGCGGTTCACGTCCGGATATGTGGGAATCCCCTCAAACAAAACACTGGTTGGTCACCTTGTATTaGTCCACAATGCTCCACAGG +
Preference number: 5 (lower is better)
Translates to: STGGSRPDMWESPQTKHWLVTLY*STMLHR
Trigger: CCTGTGGAGCATTGTGGACAAATACAAGGTGACCAA...CCAGTGTTTTGTTTGAGGGGATTCCCACATATCCGGACGTGAACCGCCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CAAGGTGACAAAGCAGTAGAGGCATTCACCCTTCACAGGATGAGGGTGGCCCACAGGTGTCCAGATACATaGAGCATGTCATCAATCCTG +
Preference number: 5 (lower is better)
Translates to: QGDKAVEAFTLHRMRVAHRCPDT*SMSSIL
Trigger: CAGGATTGATGACATGCTCAATGTATCTGGACACCT...GTGGGCCACCCTCATCCTGTGAAGGGTGAATGCCTCTACTGCTTTGTCACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CAA 90 bp TCTGCCCATACAGCCCCTGGAGCCAATGGGCAGACAGTACTGGCATCTGGCACATGGACTCACAAATCATaGTTTTTAAGGGCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: SAHTAPGANGQTVLASGTWTHKS*FLRASA
Trigger: TGCACTTGCCCTTAAAAACAATGATTTGTGAGTCCA...TGTGCCAGATGCCAGTACTGTCTGCCCATTGGCTCCAGGGGCTGTATGGGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS GCA 90 bp ACCTTCAGCTTCACCTTCCAACTCTTCCCCGGACTCATTCAGGATTaGAGGAGCTACACCAAAGAATGGGAAAGTCTAGAAGCAAACGGG +
Preference number: 5 (lower is better)
Translates to: TFSFTFQLFPGLIQD*RSYTKEWESLEANG
Trigger: CCCGTTTGCTTCTAGACTTTCCCATTCTTTGGTGTAGCTCCTGCAATCCTGAATGAGTCCGGGGAAGAGTTGGAAGGTGAAGCTGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470315.1
CDS GCA 90 bp TTCTCTAGCCACAGAGGACAGGATAGGAGAAACCAAGTCAGAGACTaGAGCAAGAGGGATCCAATCTGTGCCTTAAGAGAAGTTCCCCAC +
Preference number: 5 (lower is better)
Translates to: FSSHRGQDRRNQVRD*SKRDPICALREVPH
Trigger: GTGGGGAACTTCTCTTAAGGCACAGATTGGATCCCTCTTGCTGCAGTCTCTGACTTGGTTTCTCCTATCCTGTCCTCTGTGGCTAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490046.1
CDS CCA 90 bp CTCTTCCCCGGACTCATTCAGGATTGCAGGAGCTACACCAAAGAATaGGAAAGTCTAGAAGCAAACGGGAGACAGAACCCAAGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: LFPGLIQDCRSYTKE*ESLEANGRQNPRRG
Trigger: TCCTCTTCTTGGGTTCTGTCTCCCGTTTGCTTCTAGACTTTCCCATTCTTTGGTGTAGCTCCTGCAATCCTGAATGAGTCCGGGGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470315.1
CDS-3UTR CAA 90 bp CAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAACTCATCCCCTGCCTCTaGCATGAGCTCATGCCACCA +
Preference number: 5 (lower is better)
Translates to: QGRQAPLALGTKHIYSFKLIPCL*HELMPP
Trigger: TGGTGGCATGAGCTCATGCAAGAGGCAGGGGATGAG...TTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp GGCCCTCACATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTTGGTCACCTTGTATTaGTCCACAATGCTCCACAGG +
Preference number: 5 (lower is better)
Translates to: GPHIPFEHLTWVGEVAFSLVTLY*STMLHR
Trigger: CCTGTGGAGCATTGTGGACAAATACAAGGTGACCAA...CGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGATGTGAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp TTTTCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGTTGGTCACCTTGTATTaGTCCACAATGCTCCACAGG +
Preference number: 5 (lower is better)
Translates to: FSLICFLSSSVSLGLKVWLVTLY*STMLHR
Trigger: CCTGTGGAGCATTGTGGACAAATACAAGGTGACCAA...CCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CAATGGGCAGACAGTACTGGCATCTGGCACAAAAGGGAATTCAGACCCAGAACATCTCTAATCTGCTTCTaGAGCTCCTCGGTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: QWADSTGIWHKREFRPRTSLICF*SSSVSL
Trigger: CAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGA...TGTTCTGGGTCTGAATTCCCTTTTGTGCCAGATGCCAGTACTGTCTGCCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CAGCTGCCTCTGCAACAGCCTCATGTTCCACAAGTGCTGACTCCACCTCTGCTGTGGACTCACAAATCATaGTTTTTAAGGGCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: QLPLQQPHVPQVLTPPLLWTHKS*FLRASA
Trigger: TGCACTTGCCCTTAAAAACAATGATTTGTGAGTCCA...CAGCAGAGGTGGAGTCAGCACTTGTGGAACATGAGGCTGTTGCAGAGGCAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAACTACAACCACAGGGCTaGAGCCTGACTGGGGCAAGA +
Preference number: 5 (lower is better)
Translates to: QGRQAPLALGTKHIYSFKLQPQG*SLTGAR
Trigger: TCTTGCCCCAGTCAGGCTCAAGCCCTGTGGTTGTAG...TTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp TTTTCTCTAATCTGCTTCTTGAGCTCCTCGGTGAGCTTGGGGCTGAAGGTGTGGAGGTGTCCAGATACATaGAGCATGTCATCAATCCTG +
Preference number: 5 (lower is better)
Translates to: FSLICFLSSSVSLGLKVWRCPDT*SMSSIL
Trigger: CAGGATTGATGACATGCTCAATGTATCTGGACACCT...CCACACCTTCAGCCCCAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477932.5
ENST00000480978.5
ENST00000481284.5
CDS-3UTR CAA 90 bp TTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTTCTCTAATCTGCTTCTaGAGCTCCTCGGTGAGCTTG +
Preference number: 5 (lower is better)
Translates to: LTWVGEVAFSSLFWVLRASLICF*SSSVSL
Trigger: CAAGCTCACCGAGGAGCTCAAGAAGCAGATTAGAGA...AGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS CCA 90 bp CCCTTTAGTCACATCAAAGTTGTACCGAAGGAATGGGCCAGGGCATaGAGTCTTCCAGTAAAATTCCTTGGCAATGTCTCCCCAGAATTC +
Preference number: 5 (lower is better)
Translates to: PFSHIKVVPKEWARA*SLPVKFLGNVSPEF
Trigger: GAATTCTGGGGAGACATTGCCAAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCATTCCTTCGGTACAACTTTGATGTGACTAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000461051.1
ENST00000467019.5
ENST00000473172.5
ENST00000475459.6
ENST00000476922.5
ENST00000477932.5
ENST00000480274.1
ENST00000480978.5
ENST00000481284.5
ENST00000481971.5
ENST00000488172.5
ENST00000490046.1
ENST00000493805.6
ENST00000497927.5
CDS CCA 90 bp AATGAAGATTTTCCCTTTAGTCACATCAAAGTTGTACCGAAGGAATaGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCCGCGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: NEDFPFSHIKVVPKE*ARAWSLPVKFPRLL
Trigger: GAGGAGCCGCGGGAATTTTACTGGAAGACTCCATGCCCTGGCCCATTCCTTCGGTACAACTTTGATGTGACTAAAGGGAAAATCTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484354.1
CDS TCA 90 bp GTCTCCCCAGAATTCCTGGAACCAGCTCAGATTTTCTCCCTCTTATaGGGACATGTCTTCAATCTCCTTGCCTTCACAAATCTCCATCCA +
Preference number: 5 (lower is better)
Translates to: VSPEFLEPAQIFSLL*GHVFNLLAFTNLHP
Trigger: TGGATGGAGATTTGTGAAGGCAAGGAGATTGAAGACATGTCCTCATAAGAGGGAGAAAATCTGAGCTGGTTCCAGGAATTCTGGGGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461051.1
CDS-3UTR CAA 90 bp TTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGGTTCTGAGAGCTAGGTGTCCAGATACATaGAGCATGTCATCAATCCTG +
Preference number: 5 (lower is better)
Translates to: LTWVGEVAFSSLFWVLRARCPDT*SMSSIL
Trigger: CAGGATTGATGACATGCTCAATGTATCTGGACACCT...AGCTCTCAGAACCCAGAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAATTAGTCACATCAAAGTaGTACCGAAGGAATGGGCCA +
Preference number: 5 (lower is better)
Translates to: QGRQAPLALGTKHIYSFKLVTSK*YRRNGP
Trigger: TGGCCCATTCCTTCGGTACAACTTTGATGTGACTAA...TTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS CCA 90 bp AATGAAGATTTTCCCTTTAGTCACATCAAAGTTGTACCGAAGGAATaGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCTTGGCAATGTC +
Preference number: 5 (lower is better)
Translates to: NEDFPFSHIKVVPKE*ARAWSLPVKFLGNV
Trigger: GACATTGCCAAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCATTCCTTCGGTACAACTTTGATGTGACTAAAGGGAAAATCTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000461051.1
ENST00000467019.5
ENST00000473172.5
ENST00000475459.6
ENST00000476922.5
ENST00000477932.5
ENST00000480274.1
ENST00000480978.5
ENST00000481284.5
ENST00000481971.5
ENST00000488172.5
ENST00000490046.1
ENST00000493805.6
ENST00000497927.5
CDS-3UTR CAA 90 bp ATCCCCTTTGAACACTTAACTTGGGTAGGAGAGGTAGCCTTTTCGTCTCTGTTCTGGACTCACAAATCATaGTTTTTAAGGGCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: IPFEHLTWVGEVAFSSLFWTHKS*FLRASA
Trigger: TGCACTTGCCCTTAAAAACAATGATTTGTGAGTCCA...GAACAGAGACGAAAAGGCTACCTCTCCTACCCAAGTTAAGTGTTCAAAGGGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp CAAGGAAGACAAGCTCCTCTGGCCCTAGGAACAAAACACATTTACTCCTTCAAATGGACTCACAAATCATaGTTTTTAAGGGCAAGTGCA +
Preference number: 5 (lower is better)
Translates to: QGRQAPLALGTKHIYSFKWTHKS*FLRASA
Trigger: TGCACTTGCCCTTAAAAACAATGATTTGTGAGTCCA...TTTGAAGGAGTAAATGTGTTTTGTTCCTAGGGCCAGAGGAGCTTGTCTTCCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000477932.5
ENST00000481284.5
CDS-3UTR CAA 90 bp AAGCAACTTTATCTCCAAGCTTTTTCTCATGGACATTTCGATCCAGTACATTGTTTAGTCACATCAAAGTaGTACCGAAGGAATGGGCCA +
Preference number: 5 (lower is better)
Translates to: KQLYLQAFSHGHFDPVHCLVTSK*YRRNGP
Trigger: TGGCCCATTCCTTCGGTACAACTTTGATGTGACTAA...ACAATGTACTGGATCGAAATGTCCATGAGAAAAAGCTTGGAGATAAAGTTGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000481284.5
CDS TCA 72 bp GGTAGCGCTGCAGCGAGGGGACGTGCGCGGAGCGGCTaGCCTCGGGCGGCGGAGACCAACTCCGCGCCCGGC +
Preference number: 6 (lower is better)
Translates to: GSAAARGRARSG*PRAAETNSAPG
Trigger: GCCGGGCGCGGAGTTGGTCTCCGCCGCCCGAGGTCAGCCGCTCCGCGCACGTCCCCTCGCTGCAGCGCTACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000467019.5
ENST00000473172.5
ENST00000476922.5
ENST00000477932.5
ENST00000480978.5
ENST00000484354.1
ENST00000493805.6
CDS CCA 72 bp GACGGGGGCGAGTCAGACCGGGACACGGCCGAGGGCTaGGAGAGGCGCCCCCTCCCGGCTGTCGCGAAGATC +
Preference number: 6 (lower is better)
Translates to: DGGESDRDTAEG*ERRPLPAVAKI
Trigger: GATCTTCGCGACAGCCGGGAGGGGGCGCCTCTCCCAGCCCTCGGCCGTGTCCCGGTCTGACTCGCCCCCGTC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481971.5
CDS CAA 72 bp CCCCATCACGTCAAGTTCCTAGAACCGCGGCCGCCTTaGCGGTCGCGGCGGGTGCCGGGACTGAGAAAACAG +
Preference number: 6 (lower is better)
Translates to: PHHVKFLEPRPP*RSRRVPGLRKQ
Trigger: CTGTTTTCTCAGTCCCGGCACCCGCCGCGACCGCAAAGGCGGCCGCGGTTCTAGGAACTTGACGTGATGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000480274.1
ENST00000484354.1
CDS CCA 72 bp GCGTTCGTGGTTCCCATAGACTGTGCGCATGATCCCTaGCCAGGGCTGCTTGAACACCTGGGGAGTGAGGAA +
Preference number: 6 (lower is better)
Translates to: AFVVPIDCAHDP*PGLLEHLGSEE
Trigger: TTCCTCACTCCCCAGGTGTTCAAGCAGCCCTGGCCAGGGATCATGCGCACAGTCTATGGGAACCACGAACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494727.1
CDS TCA 72 bp TTCCTGAGTAGGCCTCTTAACTCTGGCTCTTCCAGCTaGTTCGAGCTGACAGAGGGTCAGCTGAGGTGGGAC +
Preference number: 6 (lower is better)
Translates to: FLSRPLNSGSSS*FELTEGQLRWD
Trigger: GTCCCACCTCAGCTGACCCTCTGTCAGCTCGAATCAGCTGGAAGAGCCAGAGTTAAGAGGCCTACTCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493250.1
CDS GCA 72 bp AGAAGCCTGCAAACACAATGGAGTGCAAAGCCCCAATaGGGGCACATGCCAGCATGGCCACCACAAGCTTTC +
Preference number: 6 (lower is better)
Translates to: RSLQTQWSAKPQ*GHMPAWPPQAF
Trigger: GAAAGCTTGTGGTGGCCATGCTGGCATGTGCCCGCATTGGGGCTTTGCACTCCATTGTGTTTGCAGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000464399.2
CDS CCA 72 bp ATGGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCTTaGCAATGTCTCCCCAGAATTCCCGCGGCTCCTCCA +
Preference number: 6 (lower is better)
Translates to: MGQGMESSSKIP*QCLPRIPAAPP
Trigger: TGGAGGAGCCGCGGGAATTCTGGGGAGACATTGCCAAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000467019.5
ENST00000473172.5
ENST00000476922.5
ENST00000477932.5
ENST00000480978.5
ENST00000493805.6
CDS CCA 72 bp ATGGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCTTaGCAATGTCTCCCCAGAATTCTCGGGCGGCGGAGA +
Preference number: 6 (lower is better)
Translates to: MGQGMESSSKIP*QCLPRILGRRR
Trigger: TCTCCGCCGCCCGAGAATTCTGGGGAGACATTGCCAAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480274.1
CDS CCA 72 bp TTCCCCACAGCCAGGGATTGTGAGAAGCAGAGGGTCTaGGAGAAGCGGAGAATCTCTTCATGTCTAGGGAGG +
Preference number: 6 (lower is better)
Translates to: FPTARDCEKQRV*EKRRISSCLGR
Trigger: CCTCCCTAGACATGAAGAGATTCTCCGCTTCTCCCAGACCCTCTGCTTCTCACAATCCCTGGCTGTGGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490046.1
CDS CCA 72 bp CACATCAAAGTTGTACCGAAGGAATGGGCCAGGGCATaGAGTCTTCCAGTAAAATTCCCGCGGCTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: HIKVVPKEWARA*SLPVKFPRLLH
Trigger: GTGGAGGAGCCGCGGGAATTTTACTGGAAGACTCCATGCCCTGGCCCATTCCTTCGGTACAACTTTGATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484354.1
CDS TCA 72 bp CGGTTCACGTCCGGATATGTGGGAATCCCCTCAAACTaGCCCATGAAGGCTGGTCATTCCCAGTCTTTCCTA +
Preference number: 6 (lower is better)
Translates to: RFTSGYVGIPSN*PMKAGHSQSFL
Trigger: TAGGAAAGACTGGGAATGACCAGCCTTCATGGGTCAGTTTGAGGGGATTCCCACATATCCGGACGTGAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490464.1
CDS GCA 72 bp AAACACAATGGAGTGCAAAGCCCCAATGCGGGCACATaGCAGCATGGCCACCACAAGCTTTCGGAGAACATT +
Preference number: 6 (lower is better)
Translates to: KHNGVQSPNAGT*QHGHHKLSENI
Trigger: AATGTTCTCCGAAAGCTTGTGGTGGCCATGCTGGCATGTGCCCGCATTGGGGCTTTGCACTCCATTGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464399.2
CDS GCA 72 bp CCAAGTCAGAGACTGCAGCAAGAGGGATCCAATCTGTaGCTTAAGAGAAGTTCCCCACAGCCAGGGATTGTG +
Preference number: 6 (lower is better)
Translates to: PSQRLQQEGSNL*LKRSSPQPGIV
Trigger: CACAATCCCTGGCTGTGGGGAACTTCTCTTAAGGCACAGATTGGATCCCTCTTGCTGCAGTCTCTGACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490046.1
CDS CCA 72 bp ATGGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCTTaGCAATGTCTCCCCAGAATTCTGTGTGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: MGQGMESSSKIP*QCLPRILCASC
Trigger: GCAGCTGGCACACAGAATTCTGGGGAGACATTGCCAAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481971.5
CDS CAA 90 bp CATGGCCACCACAAGCTTTCGGAGAACATTGCTGAACTGACACACTaGGACCAGAAGCTGATGGTATGTGATCTGAGTGGTCTCCCCTGG +
Preference number: 6 (lower is better)
Translates to: HGHHKLSENIAELTH*DQKLMVCDLSGLPW
Trigger: CCAGGGGAGACCACTCAGATCACATACCATCAGCTTCTGGTCCAAGTGTGTCAGTTCAGCAATGTTCTCCGAAAGCTTGTGGTGGCCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464399.2
CDS TCA 72 bp TCTCTACCCTCTATGCTGAGTAGCCCCAAATACCAATaGGCTGATTGGAGACCAAGGCTTGAGGTATGGGGG +
Preference number: 6 (lower is better)
Translates to: SLPSMLSSPKYQ*ADWRPRLEVWG
Trigger: CCCCCATACCTCAAGCCTTGGTCTCCAATCAGCTCATTGGTATTTGGGGCTACTCAGCATAGAGGGTAGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467019.5
CDS CCA 72 bp ATGGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCTTaGCAATGTCTCCCCAGAATTCCTGGAACCAGCTCA +
Preference number: 6 (lower is better)
Translates to: MGQGMESSSKIP*QCLPRIPGTSS
Trigger: TGAGCTGGTTCCAGGAATTCTGGGGAGACATTGCCAAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461051.1
CDS TCA 72 bp AGGAGAGAAAAGGCAGGCAGTCTCTACCCTCTATGCTaGGTAGCCCCAAATACCAATGAGCTGATTGGAGAC +
Preference number: 6 (lower is better)
Translates to: RREKAGSLYPLC*VAPNTNELIGD
Trigger: GTCTCCAATCAGCTCATTGGTATTTGGGGCTACTCAGCATAGAGGGTAGAGACTGCCTGCCTTTTCTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467019.5
CDS CCA 72 bp ATGGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCTTaGCAATGTCTCCCCAGAATTCTGCACTCACCACAA +
Preference number: 6 (lower is better)
Translates to: MGQGMESSSKIP*QCLPRILHSPQ
Trigger: TTGTGGTGAGTGCAGAATTCTGGGGAGACATTGCCAAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481284.5
ENST00000497927.5
CDS CCA 72 bp ATGGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCTTaGCAATGTCTCCCCAGAATTCTTCTGGGAAGAACC +
Preference number: 6 (lower is better)
Translates to: MGQGMESSSKIP*QCLPRILLGRT
Trigger: GGTTCTTCCCAGAAGAATTCTGGGGAGACATTGCCAAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490046.1
CDS CCA 72 bp GGACTCATTCAGGATTGCAGGAGCTACACCAAAGAATaGGAAAGTCTAGAAGCAAACGGGAGACAGAACCCA +
Preference number: 6 (lower is better)
Translates to: GLIQDCRSYTKE*ESLEANGRQNP
Trigger: TGGGTTCTGTCTCCCGTTTGCTTCTAGACTTTCCCATTCTTTGGTGTAGCTCCTGCAATCCTGAATGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470315.1
CDS GCA 72 bp TTCACCTTCCAACTCTTCCCCGGACTCATTCAGGATTaGAGGAGCTACACCAAAGAATGGGAAAGTCTAGAA +
Preference number: 6 (lower is better)
Translates to: FTFQLFPGLIQD*RSYTKEWESLE
Trigger: TTCTAGACTTTCCCATTCTTTGGTGTAGCTCCTGCAATCCTGAATGAGTCCGGGGAAGAGTTGGAAGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470315.1
CDS CCA 72 bp TTTCCCTTTAGTCACATCAAAGTTGTACCGAAGGAATaGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCCG +
Preference number: 6 (lower is better)
Translates to: FPFSHIKVVPKE*ARAWSLPVKFP
Trigger: CGGGAATTTTACTGGAAGACTCCATGCCCTGGCCCATTCCTTCGGTACAACTTTGATGTGACTAAAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484354.1
CDS CAA 72 bp CACAAGCTTTCGGAGAACATTGCTGAACTGACACACTaGGACCAGAAGCTGATGGTATGTGATCTGAGTGGT +
Preference number: 6 (lower is better)
Translates to: HKLSENIAELTH*DQKLMVCDLSG
Trigger: ACCACTCAGATCACATACCATCAGCTTCTGGTCCAAGTGTGTCAGTTCAGCAATGTTCTCCGAAAGCTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464399.2
CDS CCA 72 bp TTTCCCTTTAGTCACATCAAAGTTGTACCGAAGGAATaGGCCAGGGCATGGAGTCTTCCAGTAAAATTCCTT +
Preference number: 6 (lower is better)
Translates to: FPFSHIKVVPKE*ARAWSLPVKFL
Trigger: AAGGAATTTTACTGGAAGACTCCATGCCCTGGCCCATTCCTTCGGTACAACTTTGATGTGACTAAAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000253382.5
ENST00000360596.7
ENST00000461051.1
ENST00000467019.5
ENST00000473172.5
ENST00000475459.6
ENST00000476922.5
ENST00000477932.5
ENST00000480274.1
ENST00000480978.5
ENST00000481284.5
ENST00000481971.5
ENST00000488172.5
ENST00000490046.1
ENST00000493805.6
ENST00000497927.5
CDS CCA 72 bp ATATGTGGGAATCCCCTCAAACTGACCCATGAAGGCTaGTCATTCCCAGTCTTTCCTAATAGTCCTTCTATT +
Preference number: 6 (lower is better)
Translates to: ICGNPLKLTHEG*SFPVFPNSPSI
Trigger: AATAGAAGGACTATTAGGAAAGACTGGGAATGACCAGCCTTCATGGGTCAGTTTGAGGGGATTCCCACATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490464.1
CDS CAA 72 bp TTTTCTCCCTCTTATGAGGACATGTCTTCAATCTCCTaGCCTTCACAAATCTCCATCCAGATCTGCACTCAC +
Preference number: 6 (lower is better)
Translates to: FSPSYEDMSSIS*PSQISIQICTH
Trigger: GTGAGTGCAGATCTGGATGGAGATTTGTGAAGGCAAGGAGATTGAAGACATGTCCTCATAAGAGGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461051.1
CDS TCA 72 bp GAATTCCTGGAACCAGCTCAGATTTTCTCCCTCTTATaGGGACATGTCTTCAATCTCCTTGCCTTCACAAAT +
Preference number: 6 (lower is better)
Translates to: EFLEPAQIFSLL*GHVFNLLAFTN
Trigger: ATTTGTGAAGGCAAGGAGATTGAAGACATGTCCTCATAAGAGGGAGAAAATCTGAGCTGGTTCCAGGAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461051.1
CDS TCA 72 bp TGGCTCATTGCCCTCCCTGCAAGTATATCTGTAGGATaGATTACCAGAAGTGGACCAGTAAAAAGCAACTTT +
Preference number: 6 (lower is better)
Translates to: WLIALPASISVG*ITRSGPVKSNF
Trigger: AAAGTTGCTTTTTACTGGTCCACTTCTGGTAATTCATCCTACAGATATACTTGCAGGGAGGGCAATGAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473172.5
CDS TCA 72 bp TGTTTAGTAAATTTGTGTCTCCTTTTGGGCAATCCTTaGGGAAAGCAGGTCCAGTTTGATACAAATGAAAAC +
Preference number: 6 (lower is better)
Translates to: CLVNLCLLLGNP*GKQVQFDTNEN
Trigger: GTTTTCATTTGTATCAAACTGGACCTGCTTTCCTCAAGGATTGCCCAAAAGGAGACACAAATTTACTAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494727.1