RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000134575

Ensembl transcript IDs: ENST00000256997.9, ENST00000527256.7, ENST00000529444.7, ENST00000533929.7, ENST00000671941.1, ENST00000672073.1, ENST00000672075.1, ENST00000672166.1, ENST00000672351.1, ENST00000672636.2, ENST00000672787.1, ENST00000673184.1, ENST00000673511.1, ENST00000673562.1, ENST00000673604.1

Found 627 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGGGAAGGGGGCTGAGTGGTTGTCAGGCGTGGTCCTCCCCATCTaGGACGTGGCGGTAGCCAGGAGGCTGGGCCTGCATCCGGAAGAG +
Preference number: 1 (lower is better)
Translates to: GGKGAEWLSGVVLPI*DVAVARRLGLHPEE
Trigger: CTCTTCCGGATGCAGGCCCAGCCTCCTGGCTACCGCCACGTCGCAGATGGGGAGGACCACGCCTGACAACCACTCAGCCCCCTTCCCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR TCA 90 bp CCAGCTGGCACTCCTGCTGCCAATCCTTGGGCACGACGGGCTCTGTaGGGCGAAGGAAGTCCTGCAGTGGGCAGCGGTGAGGGCAGCCAG +
Preference number: 1 (lower is better)
Translates to: PAGTPAANPWARRAL*GEGSPAVGSGEGSQ
Trigger: CTGGCTGCCCTCACCGCTGCCCACTGCAGGACTTCCTTCGCCTCACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR GCA 90 bp CCGAAGAGGAAGCGGAAGCTGAAGTCCTTTAGCCGGCTGAGACGCTaGATGGTTTGGGGTGAGGCCCAGGGCGGCAGGCGCAGCCCGTGC +
Preference number: 1 (lower is better)
Translates to: PKRKRKLKSFSRLRR*MVWGEAQGGRRSPC
Trigger: GCACGGGCTGCGCCTGCCGCCCTGGGCCTCACCCCAAACCATGCAGCGTCTCAGCCGGCTAAAGGACTTCAGCTTCCGCTTCCTCTTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR TCA 90 bp GAAGGAAGTCCTGCAGTGGGCAGCGGTGAGGGCAGCCAGGCAGGCTaGGCGGCCAGGGGGCCTTGTCACTCTCGTTCCGAAAGTACATCT +
Preference number: 1 (lower is better)
Translates to: EGSPAVGSGEGSQAG*AARGPCHSRSESTS
Trigger: AGATGTACTTTCGGAACGAGAGTGACAAGGCCCCCTGGCCGCTCAGCCTGCCTGGCTGCCCTCACCGCTGCCCACTGCAGGACTTCCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR CCA 90 bp GCCAAGGCCACAATCACCTCTGTGTCTGCAGGACCGCTTGCCAGCTaGCACTCCTGCTGCCAATCCTTGGGCACGACGGGCTCTGTGAGG +
Preference number: 1 (lower is better)
Translates to: AKATITSVSAGPLAS*HSCCQSLGTTGSVR
Trigger: CCTCACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATTGTGGCCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR GCA 90 bp ATCACCTCTGTGTCTGCAGGACCGCTTGCCAGCTGGCACTCCTGCTaGCAATCCTTGGGCACGACGGGCTCTGTGAGGCGAAGGAAGTCC +
Preference number: 1 (lower is better)
Translates to: ITSVSAGPLASWHSC*QSLGTTGSVRRRKS
Trigger: GGACTTCCTTCGCCTCACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR GCA 90 bp ACAATCACCTCTGTGTCTGCAGGACCGCTTGCCAGCTGGCACTCCTaGTGCCAATCCTTGGGCACGACGGGCTCTGTGAGGCGAAGGAAG +
Preference number: 1 (lower is better)
Translates to: TITSVSAGPLASWHS*CQSLGTTGSVRRRK
Trigger: CTTCCTTCGCCTCACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR TCA 90 bp TGTCCAACACAGCACTTGGTAAACATCAGGCATGGGAATGCTGAGTaGCAGGCACCATGGGCCACGCTGAGCCCCACTCGCTCATCTGGC +
Preference number: 1 (lower is better)
Translates to: CPTQHLVNIRHGNAE*QAPWATLSPTRSSG
Trigger: GCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGGTGCCTGTCACTCAGCATTCCCATGCCTGATGTTTACCAAGTGCTGTGTTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
3UTR TCA 90 bp CCAGTGTCCAACACAGCACTTGGTAAACATCAGGCATGGGAATGCTaGGTGACAGGCACCATGGGCCACGCTGAGCCCCACTCGCTCATC +
Preference number: 1 (lower is better)
Translates to: PVSNTALGKHQAWEC*VTGTMGHAEPHSLI
Trigger: GATGAGCGAGTGGGGCTCAGCGTGGCCCATGGTGCCTGTCACTCAGCATTCCCATGCCTGATGTTTACCAAGTGCTGTGTTGGACACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
3UTR GCA 90 bp GTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTaGCATTTGCAGGGCAACCAGGGTAGTGTCGTGCGCAGAGTAAAC +
Preference number: 1 (lower is better)
Translates to: VAGGVGGLFTIVDIQ*HLQGNQGSVVRRVN
Trigger: GTTTACTCTGCGCACGACACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR TCA 90 bp TGTGGATGCTTCAGGGCACAGGAAAGGAAGCTCAGGCACAAAAAGTaGGACTCAGCAGAAAGGAGCTCTGGGTGGAGAGCAGCAGGGACT +
Preference number: 1 (lower is better)
Translates to: CGCFRAQERKLRHKK*DSAERSSGWRAAGT
Trigger: AGTCCCTGCTGCTCTCCACCCAGAGCTCCTTTCTGCTGAGTCTCACTTTTTGTGCCTGAGCTTCCTTTCCTGTGCCCTGAAGCATCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672787.1
3UTR CCA 90 bp ACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGATCCAGTTCCTTaGGAGCCAATGTTTGTACCCCTGGTATTAGCTGTTTTTCCCACT +
Preference number: 1 (lower is better)
Translates to: TQGNVAGWLLGDPVP*EPMFVPLVLAVFPT
Trigger: AGTGGGAAAAACAGCTAATACCAGGGGTACAAACATTGGCTCCCAAGGAACTGGATCACCCAACAGCCAGCCAGCCACATTTCCCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR TCA 90 bp TGGATCCAGCACCAACTCTGCCATTTTCTAATCCTAGGTCCTGAGTaGACACTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTG +
Preference number: 1 (lower is better)
Translates to: WIQHQLCHFLILGPE*TLTASLHLRCVGSV
Trigger: CACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAGTGTTCACTCAGGACCTAGGATTAGAAAATGGCAGAGTTGGTGCTGGATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR TCA 90 bp AAGGTGGATCCAGCACCAACTCTGCCATTTTCTAATCCTAGGTCCTaGGTGAACACTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAG +
Preference number: 1 (lower is better)
Translates to: KVDPAPTLPFSNPRS*VNTDCQFTSQVCRE
Trigger: CTCCCTACACACCTGAGATGTAAACTGGCAGTCAGTGTTCACTCAGGACCTAGGATTAGAAAATGGCAGAGTTGGTGCTGGATCCACCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR CCA 90 bp CTTCAGGCTGGAGGAAAAAGAACAGGGCTTGATAGAAGTGCAAGGTaGATCCAGCACCAACTCTGCCATTTTCTAATCCTAGGTCCTGAG +
Preference number: 1 (lower is better)
Translates to: LQAGGKRTGLDRSAR*IQHQLCHFLILGPE
Trigger: CTCAGGACCTAGGATTAGAAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCCTGTTCTTTTTCCTCCAGCCTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR CAA 90 bp GTGTCTGCAGGACCGCTTGCCAGCTGGCACTCCTGCTGCCAATCCTaGGGCACGACGGGCTCTGTGAGGCGAAGGAAGTCCTGCAGTGGG +
Preference number: 2 (lower is better)
Translates to: VSAGPLASWHSCCQS*GTTGSVRRRKSCSG
Trigger: CCCACTGCAGGACTTCCTTCGCCTCACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR-3UTR TCA 90 bp CCTCTGTGTCTGCAGGACCGCTTGCCAGCTGGCACTCCTGCTGCCAATCCTTGGCACCATGGGCCACGCTaGGCCCCACTCGCTCATCTG +
Preference number: 2 (lower is better)
Translates to: PLCLQDRLPAGTPAANPWHHGPR*APLAHL
Trigger: CAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGGTG...CCAAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR-3UTR GCA 90 bp GCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGAGCTGGCACTCCTGCTaGCAATCCTTGGGCACGACG +
Preference number: 2 (lower is better)
Translates to: AEPHSLIWLGSSEGGPTQSWHSC*QSLGTT
Trigger: CGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCT...CTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR-3UTR CCA 90 bp CACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCTCCTGTCCATGGGCTaGGGAGCAGCAACAGTCAGG +
Preference number: 2 (lower is better)
Translates to: HAEPHSLIWLGSSEGGPTLLSMG*GAATVR
Trigger: CCTGACTGTTGCTGCTCCCCAGCCCATGGACAGGAG...GGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp GCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGCCCCACTCGCTCATCTaGCTGGGGTCATCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: AEPHSLIWLGSSEGGPTQPHSLI*LGSSEG
Trigger: TCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGG...CTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp GCGGTAGCCAGGAGGCTGGGCCTGCATCCGGAAGAGGACGGTGAGGAGCAGCACAGTAAACCAGCAGCTTaGGGAGCTGGGAGGTGGTCG +
Preference number: 2 (lower is better)
Translates to: AVARRLGLHPEEDGEEQHSKPAA*GAGRWS
Trigger: CGACCACCTCCCAGCTCCCCAAGCTGCTGGTTTACT...GTGCTGCTCCTCACCGTCCTCTTCCGGATGCAGGCCCAGCCTCCTGGCTACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR-3UTR CCA 90 bp CCATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGAGGATCTCCTGTCCATaGGCTGGGGAGCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: PWATLSPTRSSGWGHQRERISCP*AGEQQQ
Trigger: CTGTTGCTGCTCCCCAGCCCATGGACAGGAGATCCT...CTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp GAGTGGTTGTCAGGCGTGGTCCTCCCCATCTGCGACGTGGCGGTAGCCAGGAGGAGGATCTCCTGTCCATaGGCTGGGGAGCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: EWLSGVVLPICDVAVARRRISCP*AGEQQQ
Trigger: CTGTTGCTGCTCCCCAGCCCATGGACAGGAGATCCT...CCTCCTGGCTACCGCCACGTCGCAGATGGGGAGGACCACGCCTGACAACCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR-3UTR GCA 90 bp CAGCCTCTCCAGGGGGCAGCTCTCTTCCCTAGTGGGAAGGTGCCTGTGTGTGTGGGCAGGCGGTGTGGATaGTTCAGGGCACAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: QPLQGAALFPSGKVPVCVGRRCG*FRAQER
Trigger: CCTTTCCTGTGCCCTGAAGCATCCACACCGCCTGCC...CACACACACAGGCACCTTCCCACTAGGGAAGAGAGCTGCCCCCTGGAGAGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672787.1
3UTR-3UTR CCA 90 bp GGCCAGCCTCTCCAGGGGGCAGCTCTCTTCCCTAGTGGGAAGGTGCCTGTGTGTACATGGCAGGCGGTGTaGATGCTTCAGGGCACAGGA +
Preference number: 2 (lower is better)
Translates to: GQPLQGAALFPSGKVPVCTWQAV*MLQGTG
Trigger: TCCTGTGCCCTGAAGCATCCACACCGCCTGCCATGT...ACACACAGGCACCTTCCCACTAGGGAAGAGAGCTGCCCCCTGGAGAGGCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672787.1
3UTR-3UTR TCA 90 bp AATCACCTCTGTGTCTGCAGGACCGCTTGCCAGCTGGCACTCCTGCTGCCAATCGCACGACGGGCTCTGTaGGGCGAAGGAAGTCCTGCA +
Preference number: 2 (lower is better)
Translates to: NHLCVCRTACQLALLLPIARRAL*GEGSPA
Trigger: TGCAGGACTTCCTTCGCCTCACAGAGCCCGTCGTGC...GATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR-3UTR TCA 90 bp AGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGCACCATGGGCCACGCTaGGCCCCACTCGCTCATCTG +
Preference number: 2 (lower is better)
Translates to: SLMVALARHREMWLAGCWHHGPR*APLAHL
Trigger: CAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGGTG...CCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR GCA 90 bp AACCAGGGTAGTGTCGTGCGCAGAGTAAACCAGCAGCTTGGGGAGCTGGGAGGTGGCAGGCGCAGCCCGTaGGTTTGCTCACAGAAGAGT +
Preference number: 2 (lower is better)
Translates to: NQGSVVRRVNQQLGELGGGRRSP*VCSQKS
Trigger: ACTCTTCTGTGAGCAAACGCACGGGCTGCGCCTGCC...ACCTCCCAGCTCCCCAAGCTGCTGGTTTACTCTGCGCACGACACTACCCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR-3UTR CCA 90 bp AATCACCTCTGTGTCTGCAGGACCGCTTGCCAGCTGGCACTCCTGCTGCCAATCTGGGGAGCTGGGAGGTaGTCGCCATTAGGGTCAGGT +
Preference number: 2 (lower is better)
Translates to: NHLCVCRTACQLALLLPIWGAGR*SPLGSG
Trigger: ACCTGACCCTAATGGCGACCACCTCCCAGCTCCCCA...GATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR-3UTR TCA 90 bp CTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAATCCTCACCATGGGCCACGCTaGGCCCCACTCGCTCATCTG +
Preference number: 2 (lower is better)
Translates to: LTASLHLRCVGSVEEANPHHGPR*APLAHL
Trigger: CAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGGTG...AGGATTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR TCA 90 bp AACCAGGGTAGTGTCGTGCGCAGAGTAAACCAGCAGCTTGGGGAGCTGGGAGGTAGTCCTTTAGCCGGCTaGGACGCTGCATGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: NQGSVVRRVNQQLGELGGSPLAG*DAAWFG
Trigger: CCCAAACCATGCAGCGTCTCAGCCGGCTAAAGGACT...ACCTCCCAGCTCCCCAAGCTGCTGGTTTACTCTGCGCACGACACTACCCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR-3UTR CCA 90 bp CTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGACTCGCTCATCTGGCTaGGGTCATCAGAGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: LMVALARHREMWLAGCWVTRSSG*GHQREA
Trigger: GGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGT...CACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR TCA 90 bp GTGTGTGTGAGGGAGGGAGAGGGGAGAGAGGCAGAGGGGCTGGAACCAGTAGACAACCATTTCCCACTCTaGGGATCTCTGTCACCCATG +
Preference number: 2 (lower is better)
Translates to: VCVREGEGREAEGLEPVDNHFPL*GSLSPM
Trigger: CATGGGTGACAGAGATCCTCAGAGTGGGAAATGGTT...GTCTACTGGTTCCAGCCCCTCTGCCTCTCTCCCCTCTCCCTCCCTCACACACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672787.1
3UTR-3UTR CCA 90 bp GGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGCACTCCTGTCCATGGGCTaGGGAGCAGCAACAGTCAGG +
Preference number: 2 (lower is better)
Translates to: GRRRRGLVHHCRHPVPFALLSMG*GAATVR
Trigger: CCTGACTGTTGCTGCTCCCCAGCCCATGGACAGGAG...TGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR-3UTR CCA 90 bp GCCCAGCTGAGGGAGAGCAGTTTCCTGATTCGTGTGACAAGCAACTCCCTTCCCAGGATCTCCTGTCCATaGGCTGGGGAGCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: AQLRESSFLIRVTSNSLPRISCP*AGEQQQ
Trigger: CTGTTGCTGCTCCCCAGCCCATGGACAGGAGATCCT...GGGAAGGGAGTTGCTTGTCACACGAATCAGGAAACTGCTCTCCCTCAGCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp CTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGACTCGCTCATCTGGCTaGGGTCATCAGAGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: LSESNGGSSQTQGNVAGWTRSSG*GHQREA
Trigger: GGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGT...CCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp AGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGACTCGCTCATCTGGCTaGGGTCATCAGAGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: SLMVALARHREMWLAGCWTRSSG*GHQREA
Trigger: GGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGT...CCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp TTCACCATTGTAGACATCCAGTGCCATTTGCAGGGCAACCAGGGTAGTGTCGTGAGACGCTGCATGGTTTaGGGTGAGGCCCAGGGCGGC +
Preference number: 2 (lower is better)
Translates to: FTIVDIQCHLQGNQGSVVRRCMV*GEAQGG
Trigger: GCCGCCCTGGGCCTCACCCCAAACCATGCAGCGTCT...CACGACACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR CAA 90 bp GGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTaGCAGGGCAACCAGGGTAGTGTCGTGCGCAGAGTAAACCAGCAG +
Preference number: 2 (lower is better)
Translates to: GGVGGLFTIVDIQCH*QGNQGSVVRRVNQQ
Trigger: CTGCTGGTTTACTCTGCGCACGACACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR-3UTR CCA 90 bp AGGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCAGGATCTCCTGTCCATaGGCTGGGGAGCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: RERGGGKSCLEKASVQHSRISCP*AGEQQQ
Trigger: CTGTTGCTGCTCCCCAGCCCATGGACAGGAGATCCT...GCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp GGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACAGGATCTCCTGTCCATaGGCTGGGGAGCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: GAWRRQILFGESQCPTQHRISCP*AGEQQQ
Trigger: CTGTTGCTGCTCCCCAGCCCATGGACAGGAGATCCT...GTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp CCCTCCCAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGAGACACAGGGAAATGTaGCTGGCTGGCTGTTGGGTG +
Preference number: 2 (lower is better)
Translates to: PSQVQTTFRPAPVEGVTTRHREM*LAGCWV
Trigger: CACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCT...CGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR GCA 90 bp GTACAGTTCAAATATGTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACAGCCGGCTGAGACGCTaGATGGTTTGGGGTGAGGCC +
Preference number: 2 (lower is better)
Translates to: VQFKYVAGGVGGLFTIVDSRLRR*MVWGEA
Trigger: GGCCTCACCCCAAACCATGCAGCGTCTCAGCCGGCT...GTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCCACATATTTGAACTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR-3UTR GCA 90 bp CACCTCTGTGTCTGCAGGACCGCTTGCCAGCTGGCACTCCTGCTGCCAATCCTTATTGTAGACATCCAGTaGCATTTGCAGGGCAACCAG +
Preference number: 2 (lower is better)
Translates to: HLCVCRTACQLALLLPILIVDIQ*HLQGNQ
Trigger: CTGGTTGCCCTGCAAATGGCACTGGATGTCTACAAT...AAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR-3UTR CCA 90 bp GTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTCCCCACTCGCTCATCTaGCTGGGGTCATCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: VEEANPVWRKPVSNTALGPHSLI*LGSSEG
Trigger: TCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGG...ACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR CAA 90 bp AATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTaGGGTGATCCAGTTCCTTGGGAGCCAATGTTTGTACCCCTGGTA +
Preference number: 2 (lower is better)
Translates to: NGGSSQTQGNVAGWL*GDPVPWEPMFVPLV
Trigger: TACCAGGGGTACAAACATTGGCTCCCAAGGAACTGGATCACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR TCA 90 bp GAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATCACCATGGGCCACGCTaGGCCCCACTCGCTCATCTG +
Preference number: 2 (lower is better)
Translates to: EANPVWRKPVSNTALGKHHHGPR*APLAHL
Trigger: CAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGGTG...ATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR TCA 90 bp CCTGAAGCATTCTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGCATGGGAATGCTGAGTaGCAGGCACCATGGGCCACG +
Preference number: 2 (lower is better)
Translates to: PEAFCLSLMVALARHREMHGNAE*QAPWAT
Trigger: CGTGGCCCATGGTGCCTGTCACTCAGCATTCCCATG...CATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAGAATGCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp TGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTACTCCTGTCCATGGGCTaGGGAGCAGCAACAGTCAGG +
Preference number: 2 (lower is better)
Translates to: WRRQILFGESQCPTQHLVLLSMG*GAATVR
Trigger: CCTGACTGTTGCTGCTCCCCAGCCCATGGACAGGAG...TACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp GGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTCTCCTGTCCATGGGCTaGGGAGCAGCAACAGTCAGG +
Preference number: 2 (lower is better)
Translates to: GPQSRTFFSSSQPACSSGLLSMG*GAATVR
Trigger: CCTGACTGTTGCTGCTCCCCAGCCCATGGACAGGAG...ACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR TCA 90 bp GAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGAAGACCGTGTCCCTCTaGGCTATTTGCCGAAGACTT +
Preference number: 2 (lower is better)
Translates to: ESNGGSSQTQGNVAGWLLKTVSL*AICRRL
Trigger: AAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTT...CAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR TCA 90 bp GGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTCCGTCCTGCTCCAGTTaGAGGGGTGACAACGATTCC +
Preference number: 2 (lower is better)
Translates to: GPQSRTFFSSSQPACSSGPSCSS*RGDNDS
Trigger: GGAATCGTTGTCACCCCTTCAACTGGAGCAGGACGG...ACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp GAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACTCCTGTCCATGGGCTaGGGAGCAGCAACAGTCAGG +
Preference number: 2 (lower is better)
Translates to: EEANPVWRKPVSNTALGKLLSMG*GAATVR
Trigger: CCTGACTGTTGCTGCTCCCCAGCCCATGGACAGGAG...TTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp CCTGAAGCATTCTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGAGGATCTCCTGTCCATaGGCTGGGGAGCAGCAACAG +
Preference number: 2 (lower is better)
Translates to: PEAFCLSLMVALARHREMRISCP*AGEQQQ
Trigger: CTGTTGCTGCTCCCCAGCCCATGGACAGGAGATCCT...CATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAGAATGCTTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp AAAATAAGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTACTCGCTCATCTGGCTaGGGTCATCAGAGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: KISTERQDRVPLSYLPKTTRSSG*GHQREA
Trigger: GGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGT...AGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCTTATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACACTCGCTCATCTGGCTaGGGTCATCAGAGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: RRQILFGESQCPTQHLVNTRSSG*GHQREA
Trigger: GGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGT...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp ACAGTTCAAATATGTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATAGCAGCTTGGGGAGCTaGGAGGTGGTCGCCATTAGG +
Preference number: 2 (lower is better)
Translates to: TVQICGRRRRGLVHHCRHSSLGS*EVVAIR
Trigger: CCTAATGGCGACCACCTCCCAGCTCCCCAAGCTGCT...ATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCCACATATTTGAACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR-3UTR TCA 90 bp GGGAGCTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTGTCCTGAGTGAACACTaGCTGCCAGTTTACATCTCA +
Preference number: 2 (lower is better)
Translates to: GSCPSPILGHSLELSFPAVLSEH*LPVYIS
Trigger: TGAGATGTAAACTGGCAGTCAGTGTTCACTCAGGAC...AGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR TCA 90 bp CTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTATCCTAGGTCCTGAGTaGACACTGACTGCCAGTTTA +
Preference number: 2 (lower is better)
Translates to: LSLMVALARHREMWLAGCILGPE*TLTASL
Trigger: TAAACTGGCAGTCAGTGTTCACTCAGGACCTAGGAT...ACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp AGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATCCCCCACTCGCTCATCTaGCTGGGGTCATCAGAGGGA +
Preference number: 2 (lower is better)
Translates to: RQILFGESQCPTQHLVNIPHSLI*LGSSEG
Trigger: TCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGG...GATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp AGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGAGGCAAATCCTGTTTaGAGAAAGCCAGTGTCCAAC +
Preference number: 2 (lower is better)
Translates to: SLMVALARHREMWLAGCWEANPV*RKPVSN
Trigger: GTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC...CCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp GGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTAGACACAGGGAAATGTaGCTGGCTGGCTGTTGGGTG +
Preference number: 2 (lower is better)
Translates to: GPQSRTFFSSSQPACSSGRHREM*LAGCWV
Trigger: CACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCT...ACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
3UTR CAA 90 bp ATCTTCCTGGTACAGTTCAAATATGTGGCAGGAGGCGTAGGGGGCTaGTTCACCATTGTAGACATCCAGTGCCATTTGCAGGGCAACCAG +
Preference number: 2 (lower is better)
Translates to: IFLVQFKYVAGGVGG*FTIVDIQCHLQGNQ
Trigger: CTGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCCACATATTTGAACTGTACCAGGAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR-3UTR TCA 90 bp CTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAAAAGACCGTGTCCCTCTaGGCTATTTGCCGAAGACTT +
Preference number: 2 (lower is better)
Translates to: LPQPYSGPQSRTFFSSSQKTVSL*AICRRL
Trigger: AAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTT...TTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp CTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAAGATAGAAGTGCAAGGTaGATCCAGCACCAACTCTGC +
Preference number: 2 (lower is better)
Translates to: LPQPYSGPQSRTFFSSSQDRSAR*IQHQLC
Trigger: GCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATC...TTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp CAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGATTCCTGGTGATCCAGTTCCTTaGGAGCCAATGTTTGTACCC +
Preference number: 2 (lower is better)
Translates to: QVQTTFRPAPVEGVTTIPGDPVP*EPMFVP
Trigger: GGGTACAAACATTGGCTCCCAAGGAACTGGATCACC...AGGAATCGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR CAA 90 bp ACATTCCAGACGGTCTCCAGTGTCAGGTCTGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAATTGCTATGAAAAATGGATCAGGGTC +
Preference number: 2 (lower is better)
Translates to: TFQTVSSVRSVSPVS*ATMSRNCYEKWIRV
Trigger: GACCCTGATCCATTTTTCATAGCAATTTCTGGACATGGTGGCCAACGAGACAGGGCTTACAGACCTGACACTGGAGACCGTCTGGAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR-3UTR TCA 90 bp CTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAAATCCTAGGTCCTGAGTaGACACTGACTGCCAGTTTA +
Preference number: 2 (lower is better)
Translates to: LPQPYSGPQSRTFFSSSQILGPE*TLTASL
Trigger: TAAACTGGCAGTCAGTGTTCACTCAGGACCTAGGAT...TTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR TCA 90 bp CGTTCCGAAAGTACATCTCCACTGAGAAATTCCCAGAATCTTCCTGGTACAGTTAGTCCTTTAGCCGGCTaGGACGCTGCATGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: RSESTSPLRNSQNLPGTVSPLAG*DAAWFG
Trigger: CCCAAACCATGCAGCGTCTCAGCCGGCTAAAGGACT...AACTGTACCAGGAAGATTCTGGGAATTTCTCAGTGGAGATGTACTTTCGGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR CAA 90 bp GAGCTATTTGCCGAAGACTTCAGGCTGGAGGAAAAAGAACAGGGCTaGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTC +
Preference number: 2 (lower is better)
Translates to: ELFAEDFRLEEKEQG*IEVQGGSSTNSAIF
Trigger: GAAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCCTGTTCTTTTTCCTCCAGCCTGAAGTCTTCGGCAAATAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR TCA 90 bp TTTCCCACTAAAATAAGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGTCTAATCCTAGGTCCTaGGTGAACACTGACTGCCAG +
Preference number: 2 (lower is better)
Translates to: FPTKISTERQDRVPLSYLSNPRS*VNTDCQ
Trigger: CTGGCAGTCAGTGTTCACTCAGGACCTAGGATTAGA...CAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCTTATTTTAGTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp AGAACAGGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTGAGGCAAATCCTGTTTaGAGAAAGCCAGTGTCCAAC +
Preference number: 2 (lower is better)
Translates to: RTGLDRSARWIQHQLCHFEANPV*RKPVSN
Trigger: GTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC...AAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCCTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR TCA 90 bp GTATTAGCTGTTTTTCCCACTAAAATAAGCACTGAGAGGCAAGACCGTGTCCCTTCTAATCCTAGGTCCTaGGTGAACACTGACTGCCAG +
Preference number: 2 (lower is better)
Translates to: VLAVFPTKISTERQDRVPSNPRS*VNTDCQ
Trigger: CTGGCAGTCAGTGTTCACTCAGGACCTAGGATTAGA...AGGGACACGGTCTTGCCTCTCAGTGCTTATTTTAGTGGGAAAAACAGCTAATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR TCA 90 bp AGGAAAGGAAGCTCAGGCACAAAAAGTGAGACTCAGCAGAAAGGAGCTCTGGGTAGCAGCAGGGACTGCTaGCAATTAATAAACCATTTC +
Preference number: 2 (lower is better)
Translates to: RKGSSGTKSETQQKGALGSSRDC*QLINHF
Trigger: GAAATGGTTTATTAATTGTCAGCAGTCCCTGCTGCT...ACCCAGAGCTCCTTTCTGCTGAGTCTCACTTTTTGTGCCTGAGCTTCCTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672787.1
3UTR-3UTR GCA 90 bp CAGTCCAATAGGAAACAGCACTATTCATTCTCTGGGAGCTGCCCCAGCCCTATTATCCAGCACCAACTCTaGCATTTTCTAATCCTAGGT +
Preference number: 2 (lower is better)
Translates to: QSNRKQHYSFSGSCPSPIIQHQL*HFLILG
Trigger: ACCTAGGATTAGAAAATGGCAGAGTTGGTGCTGGAT...AATAGGGCTGGGGCAGCTCCCAGAGAATGAATAGTGCTGTTTCCTATTGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR GCA 90 bp GGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTATCCAGCACCAACTCTaGCATTTTCTAATCCTAGGT +
Preference number: 2 (lower is better)
Translates to: GPQSRTFFSSSQPACSSGIQHQL*HFLILG
Trigger: ACCTAGGATTAGAAAATGGCAGAGTTGGTGCTGGAT...ACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CCA 90 bp GTATTAGCTGTTTTTCCCACTAAAATAAGCACTGAGAGGCAAGACCGTGTCCCTGAGGCAAATCCTGTTTaGAGAAAGCCAGTGTCCAAC +
Preference number: 2 (lower is better)
Translates to: VLAVFPTKISTERQDRVPEANPV*RKPVSN
Trigger: GTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC...AGGGACACGGTCTTGCCTCTCAGTGCTTATTTTAGTGGGAAAAACAGCTAATAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR GCA 90 bp GAAATTCCCAGAATCTTCCTGGTACAGTTCAAATATGTGGCAGGAGGCGTAGGGACCATGTCCAGAAATTaGTATGAAAAATGGATCAGG +
Preference number: 2 (lower is better)
Translates to: EIPRIFLVQFKYVAGGVGTMSRN*YEKWIR
Trigger: CCTGATCCATTTTTCATAGCAATTTCTGGACATGGT...CCCTACGCCTCCTGCCACATATTTGAACTGTACCAGGAAGATTCTGGGAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR GCA 72 bp GGGGCTGAGTGGTTGTCAGGCGTGGTCCTCCCCATCTaGGACGTGGCGGTAGCCAGGAGGCTGGGCCTGCAT +
Preference number: 3 (lower is better)
Translates to: GAEWLSGVVLPI*DVAVARRLGLH
Trigger: ATGCAGGCCCAGCCTCCTGGCTACCGCCACGTCGCAGATGGGGAGGACCACGCCTGACAACCACTCAGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR CCA 72 bp GAGGGAGGCCCAACCCAGGATCTCCTGTCCATGGGCTaGGGAGCAGCAACAGTCAGGAGCGAGGGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: EGGPTQDLLSMG*GAATVRSEGPA
Trigger: GGCTGGGCCCTCGCTCCTGACTGTTGCTGCTCCCCAGCCCATGGACAGGAGATCCTGGGTTGGGCCTCCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
3UTR CCA 72 bp GGCACCATGGGCCACGCTGAGCCCCACTCGCTCATCTaGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGAT +
Preference number: 3 (lower is better)
Translates to: GTMGHAEPHSLI*LGSSEGGPTQD
Trigger: ATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGGTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
3UTR GCA 72 bp AAGCGGAAGCTGAAGTCCTTTAGCCGGCTGAGACGCTaGATGGTTTGGGGTGAGGCCCAGGGCGGCAGGCGC +
Preference number: 3 (lower is better)
Translates to: KRKLKSFSRLRR*MVWGEAQGGRR
Trigger: GCGCCTGCCGCCCTGGGCCTCACCCCAAACCATGCAGCGTCTCAGCCGGCTAAAGGACTTCAGCTTCCGCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR GCA 72 bp GTGTCTGCAGGACCGCTTGCCAGCTGGCACTCCTGCTaGCAATCCTTGGGCACGACGGGCTCTGTGAGGCGA +
Preference number: 3 (lower is better)
Translates to: VSAGPLASWHSC*QSLGTTGSVRR
Trigger: TCGCCTCACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR TCA 72 bp ACTCCTGCTGCCAATCCTTGGGCACGACGGGCTCTGTaGGGCGAAGGAAGTCCTGCAGTGGGCAGCGGTGAG +
Preference number: 3 (lower is better)
Translates to: TPAANPWARRAL*GEGSPAVGSGE
Trigger: CTCACCGCTGCCCACTGCAGGACTTCCTTCGCCTCACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR GCA 72 bp TCTGTGTCTGCAGGACCGCTTGCCAGCTGGCACTCCTaGTGCCAATCCTTGGGCACGACGGGCTCTGTGAGG +
Preference number: 3 (lower is better)
Translates to: SVSAGPLASWHS*CQSLGTTGSVR
Trigger: CCTCACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR CCA 72 bp ACAATCACCTCTGTGTCTGCAGGACCGCTTGCCAGCTaGCACTCCTGCTGCCAATCCTTGGGCACGACGGGC +
Preference number: 3 (lower is better)
Translates to: TITSVSAGPLAS*HSCCQSLGTTG
Trigger: GCCCGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR GCA 72 bp CAAGGCCACAATCACCTCTGTGTCTGCAGGACCGCTTaGCAGCTGGCACTCCTGCTGCCAATCCTTGGGCAC +
Preference number: 3 (lower is better)
Translates to: QGHNHLCVCRTA*QLALLLPILGH
Trigger: GTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATTGTGGCCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR TCA 72 bp CAGCACTTGGTAAACATCAGGCATGGGAATGCTGAGTaGCAGGCACCATGGGCCACGCTGAGCCCCACTCGC +
Preference number: 3 (lower is better)
Translates to: QHLVNIRHGNAE*QAPWATLSPTR
Trigger: GCGAGTGGGGCTCAGCGTGGCCCATGGTGCCTGTCACTCAGCATTCCCATGCCTGATGTTTACCAAGTGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
3UTR GCA 72 bp GGGGCTGGAACCAGTAGACATGGCAGGCGGTGTGGATaGTTCAGGGCACAGGAAAGGAAGCTCAGGCACAAA +
Preference number: 3 (lower is better)
Translates to: GAGTSRHGRRCG*FRAQERKLRHK
Trigger: TTTGTGCCTGAGCTTCCTTTCCTGTGCCCTGAAGCATCCACACCGCCTGCCATGTCTACTGGTTCCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672787.1
3UTR GCA 72 bp GGCGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTaGCATTTGCAGGGCAACCAGGGTAGTGTCGTGCGC +
Preference number: 3 (lower is better)
Translates to: GVGGLFTIVDIQ*HLQGNQGSVVR
Trigger: GCGCACGACACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR CCA 72 bp GCGCAGAGTAAACCAGCAGCTTGGGGAGCTGGGAGGTaGTCGCCATTAGGGTCAGGTTCTTCCTTATCTGAG +
Preference number: 3 (lower is better)
Translates to: AQSKPAAWGAGR*SPLGSGSSLSE
Trigger: CTCAGATAAGGAAGAACCTGACCCTAATGGCGACCACCTCCCAGCTCCCCAAGCTGCTGGTTTACTCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR-3UTR CAA 90 bp GGCCAGGGGGCCTTGTCACTCTCGTTCCGAAAGTACATCTCCACTGAGAAATTCGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAAT +
Preference number: 3 (lower is better)
Translates to: GQGALSLSFRKYISTEKFVSPVS*ATMSRN
Trigger: ATTTCTGGACATGGTGGCCAACGAGACAGGGCTTAC...GAATTTCTCAGTGGAGATGTACTTTCGGAACGAGAGTGACAAGGCCCCCTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR-3UTR CAA 90 bp CAGTCCAATAGGAAACAGCACTATTCATTCTCTGGGAGCTGCCCCAGCCCTATTGTCCCTCTGAGCTATTaGCCGAAGACTTCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: QSNRKQHYSFSGSCPSPIVPLSY*PKTSGW
Trigger: CCAGCCTGAAGTCTTCGGCAAATAGCTCAGAGGGAC...AATAGGGCTGGGGCAGCTCCCAGAGAATGAATAGTGCTGTTTCCTATTGGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CAA 90 bp CAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGATTCCTTGTCCAACACAGCACTaGGTAAACATCAGGCATGGG +
Preference number: 3 (lower is better)
Translates to: QVQTTFRPAPVEGVTTIPCPTQH*VNIRHG
Trigger: CCCATGCCTGATGTTTACCAAGTGCTGTGTTGGACA...AGGAATCGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CAA 90 bp CTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGGAAAAAGAACAGGGCTaGATAGAAGTGCAAGGTGGA +
Preference number: 3 (lower is better)
Translates to: LSESNGGSSQTQGNVAGWEKEQG*IEVQGG
Trigger: TCCACCTTGCACTTCTATCAAGCCCTGTTCTTTTTC...CCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR CCA 72 bp AATGTGGCTGGCTGGCTGTTGGGTGATCCAGTTCCTTaGGAGCCAATGTTTGTACCCCTGGTATTAGCTGTT +
Preference number: 3 (lower is better)
Translates to: NVAGWLLGDPVP*EPMFVPLVLAV
Trigger: AACAGCTAATACCAGGGGTACAAACATTGGCTCCCAAGGAACTGGATCACCCAACAGCCAGCCAGCCACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CAA 90 bp GGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTCTGTCCAACACAGCACTaGGTAAACATCAGGCATGGG +
Preference number: 3 (lower is better)
Translates to: GHSLELSFPAHNLHVAQVCPTQH*VNIRHG
Trigger: CCCATGCCTGATGTTTACCAAGTGCTGTGTTGGACA...GACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CAA 90 bp GGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTCTAATCTGTCCAACACAGCACTaGGTAAACATCAGGCATGGG +
Preference number: 3 (lower is better)
Translates to: GLDRSARWIQHQLCHFLICPTQH*VNIRHG
Trigger: CCCATGCCTGATGTTTACCAAGTGCTGTGTTGGACA...GATTAGAAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CAA 90 bp GGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTCTAATCGGAGGCAAATCCTGTTaGGAGAAAGCCAGTGTCCAA +
Preference number: 3 (lower is better)
Translates to: GLDRSARWIQHQLCHFLIGGKSC*EKASVQ
Trigger: TTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCC...GATTAGAAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR TCA 72 bp CCAGCACCAACTCTGCCATTTTCTAATCCTAGGTCCTaGGTGAACACTGACTGCCAGTTTACATCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: PAPTLPFSNPRS*VNTDCQFTSQV
Trigger: CACCTGAGATGTAAACTGGCAGTCAGTGTTCACTCAGGACCTAGGATTAGAAAATGGCAGAGTTGGTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CAA 90 bp TTTCCCACTAAAATAAGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGTGTCCAACACAGCACTaGGTAAACATCAGGCATGGG +
Preference number: 3 (lower is better)
Translates to: FPTKISTERQDRVPLSYLCPTQH*VNIRHG
Trigger: CCCATGCCTGATGTTTACCAAGTGCTGTGTTGGACA...CAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCTTATTTTAGTGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CAA 90 bp CCTGAAGCATTCTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGGAAAAAGAACAGGGCTaGATAGAAGTGCAAGGTGGA +
Preference number: 3 (lower is better)
Translates to: PEAFCLSLMVALARHREMEKEQG*IEVQGG
Trigger: TCCACCTTGCACTTCTATCAAGCCCTGTTCTTTTTC...CATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAGAATGCTTCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR-3UTR CAA 90 bp ACATCTCCACTGAGAAATTCCCAGAATCTTCCTGGTACAGTTCAAATATGTGGCGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAAT +
Preference number: 3 (lower is better)
Translates to: TSPLRNSQNLPGTVQICGVSPVS*ATMSRN
Trigger: ATTTCTGGACATGGTGGCCAACGAGACAGGGCTTAC...GCCACATATTTGAACTGTACCAGGAAGATTCTGGGAATTTCTCAGTGGAGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR TCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGCTGCATGGTTTGGGGTaGGGCCCAGGGCGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWLHGLG*GPGRQA
Trigger: CGCCTGCCGCCCTGGGCCTCACCCCAAACCATGCAG...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGCGCTGCCGCAGGGCCTaGCCCAGTTCCCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWRCRRA*PSSQCC
Trigger: ACAGCACTGGGAACTGGGCCAGGCCCTGCGGCAGCG...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR GCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGGTGGTCCTCCCCATCTaGGACGTGGCGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWVVLPI*DVAVAR
Trigger: CCTGGCTACCGCCACGTCGCAGATGGGGAGGACCAC...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGAGACGCTGCATGGTTTaGGGTGAGGCCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWRRCMV*GEAQGG
Trigger: GCCGCCCTGGGCCTCACCCCAAACCATGCAGCGTCT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR TCA 90 bp CCATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGCTGCATGGTTTGGGGTaGGGCCCAGGGCGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: PWATLSPTRSSGWGHQRELHGLG*GPGRQA
Trigger: CGCCTGCCGCCCTGGGCCTCACCCCAAACCATGCAG...CTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGGCACGACGGGCTCTGTaGGGCGAAGGAAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWARRAL*GEGSPA
Trigger: TGCAGGACTTCCTTCGCCTCACAGAGCCCGTCGTGC...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR TCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGTGGAGGGAAGGGGGCTaGGTGGTTGTCAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWWREGG*VVVRRG
Trigger: ACCACGCCTGACAACCACTCAGCCCCCTTCCCTCCA...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR GCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGAGCCGGCTGAGACGCTaGATGGTTTGGGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWSRLRR*MVWGEA
Trigger: GGCCTCACCCCAAACCATGCAGCGTCTCAGCCGGCT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR GCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGGCCAGCTGGCACTCCTaGTGCCAATCCTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWASWHS*CQSLGT
Trigger: CGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGC...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR GCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGGTCTGCAGGACCGCTTaGCAGCTGGCACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWVCRTA*QLALLL
Trigger: CAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGAC...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGGGACCGCTTGCCAGCTaGCACTCCTGCTGCCAATCC +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWGPLAS*HSCCQS
Trigger: GGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCC...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR GCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGGGCAGGCGCAGCCCGTaGGTTTGCTCACAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWGRRSP*VCSQKS
Trigger: ACTCTTCTGTGAGCAAACGCACGGGCTGCGCCTGCC...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR GCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGAGCTGGCACTCCTGCTaGCAATCCTTGGGCACGACG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWSWHSC*QSLGTT
Trigger: CGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR GCA 90 bp CGTGGTCCTCCCCATCTGCGACGTGGCGGTAGCCAGGAGGCTGGGCCTGCATCCGTCTGCAGGACCGCTTaGCAGCTGGCACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RGPPHLRRGGSQEAGPASVCRTA*QLALLL
Trigger: CAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGAC...GGATGCAGGCCCAGCCTCCTGGCTACCGCCACGTCGCAGATGGGGAGGACCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGAGCGCTGCATCCCGTTaGGAGGGAAGAGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWSAASR*EGRVQP
Trigger: TGGCTGGACTCTTCCCTCCCAACGGGATGCAGCGCT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGTGGGGAGCTGGGAGGTaGTCGCCATTAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWWGAGR*SPLGSG
Trigger: ACCTGACCCTAATGGCGACCACCTCCCAGCTCCCCA...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGAGCAGCTTGGGGAGCTaGGAGGTGGTCGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWSSLGS*EVVAIR
Trigger: CCTAATGGCGACCACCTCCCAGCTCCCCAAGCTGCT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGAGTGGTTGTCAGGCGTaGTCCTCCCCATCTGCGACG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWSGCQA*SSPSAT
Trigger: CGTCGCAGATGGGGAGGACCACGCCTGACAACCACT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGCTCCTGTCCATGGGCTaGGGAGCAGCAACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWLLSMG*GAATVR
Trigger: CCTGACTGTTGCTGCTCCCCAGCCCATGGACAGGAG...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR TCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGCCCTCCTTGGTTAACTaGCCAAACCCCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWPSLVN*PNPWGH
Trigger: ATGGCCCCAGGGGTTTGGTCAGTTAACCAAGGAGGG...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR TCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGACGAGATGTTCGGGTTaGAGCGCTGCATCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWTRCSG*SAASRW
Trigger: CCAACGGGATGCAGCGCTTCAACCCGAACATCTCGT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR TCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGAGTCCTTTAGCCGGCTaGGACGCTGCATGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWSPLAG*DAAWFG
Trigger: CCCAAACCATGCAGCGTCTCAGCCGGCTAAAGGACT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR TCA 90 bp ATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCACCATGGGCCACGCTaGGCCCCACTCGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: MGHAEPHSLIWLGSSEGGHHGPR*APLAHL
Trigger: CAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGGTG...GCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGTTCGGGTTGAAGCGCTaGATCCCGTTGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWFGLKR*IPLGGK
Trigger: CTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAA...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp CTAGGCCAGCCTCTCCAGGGGGCAGCTCTCTTCCCTAGTGGGAAGGTGCCTGTGCGCTGCCGCAGGGCCTaGCCCAGTTCCCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: LGQPLQGAALFPSGKVPVRCRRA*PSSQCC
Trigger: ACAGCACTGGGAACTGGGCCAGGCCCTGCGGCAGCG...CACAGGCACCTTCCCACTAGGGAAGAGAGCTGCCCCCTGGAGAGGCTGGCCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGAGTAAACCAGCAGCTTaGGGAGCTGGGAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWSKPAA*GAGRWS
Trigger: CGACCACCTCCCAGCTCCCCAAGCTGCTGGTTTACT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp GGGCACGACGGGCTCTGTGAGGCGAAGGAAGTCCTGCAGTGGGCAGCGGTGAGGGGACCGCTTGCCAGCTaGCACTCCTGCTGCCAATCC +
Preference number: 4 (lower is better)
Translates to: GHDGLCEAKEVLQWAAVRGPLAS*HSCCQS
Trigger: GGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCC...CCTCACCGCTGCCCACTGCAGGACTTCCTTCGCCTCACAGAGCCCGTCGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR CCA 90 bp CGTGGTCCTCCCCATCTGCGACGTGGCGGTAGCCAGGAGGCTGGGCCTGCATCCAGTGGTTGTCAGGCGTaGTCCTCCCCATCTGCGACG +
Preference number: 4 (lower is better)
Translates to: RGPPHLRRGGSQEAGPASSGCQA*SSPSAT
Trigger: CGTCGCAGATGGGGAGGACCACGCCTGACAACCACT...GGATGCAGGCCCAGCCTCCTGGCTACCGCCACGTCGCAGATGGGGAGGACCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGGGTGAACGGTCTCCATaGCGGTACAGCCCGACGTAT +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWGERSP*RYSPTY
Trigger: ATACGTCGGGCTGTACCGCCATGGAGACCGTTCACC...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000533929.7
CDS-3UTR TCA 90 bp CACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCGCACGACGGGCTCTGTaGGGCGAAGGAAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: HAEPHSLIWLGSSEGGPTARRAL*GEGSPA
Trigger: TGCAGGACTTCCTTCGCCTCACAGAGCCCGTCGTGC...GGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CCATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGTGGAGGGAAGGGGGCTaGGTGGTTGTCAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: PWATLSPTRSSGWGHQREWREGG*VVVRRG
Trigger: ACCACGCCTGACAACCACTCAGCCCCCTTCCCTCCA...CTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGGCTCCAGGTCAATCCTaGATCCAGCCTCCCAACTAC +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWAPGQS*IQPPNY
Trigger: GTAGTTGGGAGGCTGGATTCAGGATTGACCTGGAGC...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533929.7
CDS-3UTR GCA 90 bp GTTTGGGGTGAGGCCCAGGGCGGCAGGCGCAGCCCGTGCGTTTGCTCACAGAAGGGCAGGCGCAGCCCGTaGGTTTGCTCACAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: VWGEAQGGRRSPCVCSQKGRRSP*VCSQKS
Trigger: ACTCTTCTGTGAGCAAACGCACGGGCTGCGCCTGCC...CTTCTGTGAGCAAACGCACGGGCTGCGCCTGCCGCCCTGGGCCTCACCCCAAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp GCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGCCAGCTGGCACTCCTaGTGCCAATCCTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: AEPHSLIWLGSSEGGPTQASWHS*CQSLGT
Trigger: CGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGC...CTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGAATCACCTCTGTGTCTaGAGGACCGCTTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWNHLCV*RTACQL
Trigger: CAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGCTCATAACGGGGACATaGGCCCAACGGGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWLITGT*AQRELQ
Trigger: CTGAAGTTCCCGTTGGGCCCATGTCCCCGTTATGAG...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
CDS-3UTR CCA 90 bp GGCCCAGGGCGGCAGGCGCAGCCCGTGCGTTTGCTCACAGAAGAGTGTGTCATAAGACGCTGCATGGTTTaGGGTGAGGCCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GPGRQAQPVRLLTEECVIRRCMV*GEAQGG
Trigger: GCCGCCCTGGGCCTCACCCCAAACCATGCAGCGTCT...TATGACACACTCTTCTGTGAGCAAACGCACGGGCTGCGCCTGCCGCCCTGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp ATGGTTTGGGGTGAGGCCCAGGGCGGCAGGCGCAGCCCGTGCGTTTGCTCACAGTGGGGAGCTGGGAGGTaGTCGCCATTAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: MVWGEAQGGRRSPCVCSQWGAGR*SPLGSG
Trigger: ACCTGACCCTAATGGCGACCACCTCCCAGCTCCCCA...CTGTGAGCAAACGCACGGGCTGCGCCTGCCGCCCTGGGCCTCACCCCAAACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp ATGGTTTGGGGTGAGGCCCAGGGCGGCAGGCGCAGCCCGTGCGTTTGCTCACAGCCCCACTCGCTCATCTaGCTGGGGTCATCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: MVWGEAQGGRRSPCVCSQPHSLI*LGSSEG
Trigger: TCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGG...CTGTGAGCAAACGCACGGGCTGCGCCTGCCGCCCTGGGCCTCACCCCAAACCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR CAA 72 bp GGACCGCTTGCCAGCTGGCACTCCTGCTGCCAATCCTaGGGCACGACGGGCTCTGTGAGGCGAAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GPLASWHSCCQS*GTTGSVRRRKS
Trigger: GGACTTCCTTCGCCTCACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR TCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGCGAGAACTCTCATTCTaGTACTCTGGTGTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWRELSF*YSGVCR
Trigger: CCGGCAGACACCAGAGTATCAGAATGAGAGTTCTCG...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
CDS-3UTR TCA 90 bp GGTAGTGTCGTGCGCAGAGTAAACCAGCAGCTTGGGGAGCTGGGAGGTGGTCGCCACCATGGGCCACGCTaGGCCCCACTCGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GSVVRRVNQQLGELGGGRHHGPR*APLAHL
Trigger: CAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGGTG...GCGACCACCTCCCAGCTCCCCAAGCTGCTGGTTTACTCTGCGCACGACACTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR TCA 90 bp CCATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGCATGGGAATGCTGAGTaGCAGGCACCATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: PWATLSPTRSSGWGHQREHGNAE*QAPWAT
Trigger: CGTGGCCCATGGTGCCTGTCACTCAGCATTCCCATG...CTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGCATGGGAATGCTGAGTaGCAGGCACCATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: AEPHSLIWLGSSEGGPTQHGNAE*QAPWAT
Trigger: CGTGGCCCATGGTGCCTGTCACTCAGCATTCCCATG...CTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR TCA 90 bp ATGGTTTGGGGTGAGGCCCAGGGCGGCAGGCGCAGCCCGTGCGTTTGCTCACAGAGTCCCTGTCCTCAGTaGTGGGCACAGTGTGCACAG +
Preference number: 4 (lower is better)
Translates to: MVWGEAQGGRRSPCVCSQSPCPQ*WAQCAQ
Trigger: CTGTGCACACTGTGCCCATCACTGAGGACAGGGACT...CTGTGAGCAAACGCACGGGCTGCGCCTGCCGCCCTGGGCCTCACCCCAAACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR GCA 90 bp GTTTGGGGTGAGGCCCAGGGCGGCAGGCGCAGCCCGTGCGTTTGCTCACAGAAGTTCGGGTTGAAGCGCTaGATCCCGTTGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VWGEAQGGRRSPCVCSQKFGLKR*IPLGGK
Trigger: CTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAA...CTTCTGTGAGCAAACGCACGGGCTGCGCCTGCCGCCCTGGGCCTCACCCCAAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGTGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWCTGIG*HEMFGL
Trigger: CAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCA...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR GCA 90 bp CCATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGGCAGGCGCAGCCCGTaGGTTTGCTCACAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PWATLSPTRSSGWGHQREGRRSP*VCSQKS
Trigger: ACTCTTCTGTGAGCAAACGCACGGGCTGCGCCTGCC...CTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCAGCCGGCTGAGACGCTaGATGGTTTGGGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SPTRSSGWGHQREAQPRISRLRR*MVWGEA
Trigger: GGCCTCACCCCAAACCATGCAGCGTCTCAGCCGGCT...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGACATCCAGTGCCATTTaGAGGGCAACCAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWTSSAI*RATRVV
Trigger: CACTACCCTGGTTGCCCTGCAAATGGCACTGGATGT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp GCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGAGCGCTGCATCCCGTTaGGAGGGAAGAGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: AEPHSLIWLGSSEGGPTQSAASR*EGRVQP
Trigger: TGGCTGGACTCTTCCCTCCCAACGGGATGCAGCGCT...CTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GAGGCCCAGGGCGGCAGGCGCAGCCCGTGCGTTTGCTCACAGAAGAGTGTGTCAAGCGCTGCATCCCGTTaGGAGGGAAGAGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: EAQGGRRSPCVCSQKSVSSAASR*EGRVQP
Trigger: TGGCTGGACTCTTCCCTCCCAACGGGATGCAGCGCT...TGACACACTCTTCTGTGAGCAAACGCACGGGCTGCGCCTGCCGCCCTGGGCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp GCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAATGGGGAGCTGGGAGGTaGTCGCCATTAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: ATLSPTRSSGWGHQREAQWGAGR*SPLGSG
Trigger: ACCTGACCCTAATGGCGACCACCTCCCAGCTCCCCA...TTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGAGTGGTTGTCAGGCGTaGTCCTCCCCATCTGCGACG +
Preference number: 4 (lower is better)
Translates to: AEPHSLIWLGSSEGGPTQSGCQA*SSPSAT
Trigger: CGTCGCAGATGGGGAGGACCACGCCTGACAACCACT...CTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CCATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGCTCCTGTCCATGGGCTaGGGAGCAGCAACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PWATLSPTRSSGWGHQRELLSMG*GAATVR
Trigger: CCTGACTGTTGCTGCTCCCCAGCCCATGGACAGGAG...CTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CCATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGACTCGCTCATCTGGCTaGGGTCATCAGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PWATLSPTRSSGWGHQRETRSSG*GHQREA
Trigger: GGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGT...CTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAAACTCGCTCATCTGGCTaGGGTCATCAGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ATLSPTRSSGWGHQREAQTRSSG*GHQREA
Trigger: GGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGT...TTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CCA 90 bp ATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCCCACTCGCTCATCTaGCTGGGGTCATCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: MGHAEPHSLIWLGSSEGGPHSLI*LGSSEG
Trigger: TCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGG...GCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGATATGTCTTCACTGGTaGACGGTCTCCATGGCGGTA +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWICLHW*TVSMAV
Trigger: TACCGCCATGGAGACCGTTCACCAGTGAAGACATAT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR TCA 90 bp GCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAAAGTCCTTTAGCCGGCTaGGACGCTGCATGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: ATLSPTRSSGWGHQREAQSPLAG*DAAWFG
Trigger: CCCAAACCATGCAGCGTCTCAGCCGGCTAAAGGACT...TTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CTCCAGGGGGCAGCTCTCTTCCCTAGTGGGAAGGTGCCTGTGTGTGTGAGGGAGACCTCCCCAGGGGCGTaGCGGTATCAGGCACTGTGT +
Preference number: 4 (lower is better)
Translates to: LQGAALFPSGKVPVCVRETSPGA*RYQALC
Trigger: ACACAGTGCCTGATACCGTCACGCCCCTGGGGAGGT...CTCCCTCACACACACAGGCACCTTCCCACTAGGGAAGAGAGCTGCCCCCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR GCA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCGGCAGGCGCAGCCCGTaGGTTTGCTCACAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SPTRSSGWGHQREAQPRIGRRSP*VCSQKS
Trigger: ACTCTTCTGTGAGCAAACGCACGGGCTGCGCCTGCC...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR GCA 90 bp ATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCTCATTCTCTGGGAGCTaGCCCAGCCCTATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: MGHAEPHSLIWLGSSEGGSFSGS*PSPILG
Trigger: GCCCAGAATAGGGCTGGGGCAGCTCCCAGAGAATGA...GCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp ATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCTGGCCCAGTTCCCAGTaGTGTAGCATCCCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: MGHAEPHSLIWLGSSEGGWPSSQ*CSIPSK
Trigger: CTTGGAGGGGATGCTACAGCACTGGGAACTGGGCCA...GCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000527256.7
CDS-3UTR GCA 90 bp GAGGGAAGTTCCCGTGTTTCACAAGCACAGCCTCCCTGGACCTCCCCAGGGGCGGGCAGGCGGTGTGGATaGTTCAGGGCACAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: EGSSRVSQAQPPWTSPGAGRRCG*FRAQER
Trigger: CCTTTCCTGTGCCCTGAAGCATCCACACCGCCTGCC...CGCCCCTGGGGAGGTCCAGGGAGGCTGTGCTTGTGAAACACGGGAACTTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGCCTGATAGGGGTCCTTaGGATATGTCTTCACTGGTG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWPDRGP*DMSSLV
Trigger: CACCAGTGAAGACATATCCCAAGGACCCCTATCAGG...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp GTTCCCGTGTTTCACAAGCACAGCCTCCCTGGACCTCCCCAGGGGCGTGACGGTAGCGCTGCATCCCGTTaGGAGGGAAGAGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VPVFHKHSLPGPPQGRDGSAASR*EGRVQP
Trigger: TGGCTGGACTCTTCCCTCCCAACGGGATGCAGCGCT...ACCGTCACGCCCCTGGGGAGGTCCAGGGAGGCTGTGCTTGTGAAACACGGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGCTCATTCTGATACTCTaGTGTCTGCCGGGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWLILIL*CLPGLV
Trigger: AACGAGACCCGGCAGACACCAGAGTATCAGAATGAG...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
CDS-3UTR CCA 90 bp CCCCCTGAAGCCGGGCCTTCTCCGCCTGCTGGTAGATTCCGAAGAGGAAGCGGATGGGGAGCTGGGAGGTaGTCGCCATTAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: PPEAGPSPPAGRFRRGSGWGAGR*SPLGSG
Trigger: ACCTGACCCTAATGGCGACCACCTCCCAGCTCCCCA...TCCGCTTCCTCTTCGGAATCTACCAGCAGGCGGAGAAGGCCCGGCTTCAGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp GGCCCAGGGCGGCAGGCGCAGCCCGTGCGTTTGCTCACAGAAGAGTGTGTCATAAGCAGCTTGGGGAGCTaGGAGGTGGTCGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: GPGRQAQPVRLLTEECVISSLGS*EVVAIR
Trigger: CCTAATGGCGACCACCTCCCAGCTCCCCAAGCTGCT...TATGACACACTCTTCTGTGAGCAAACGCACGGGCTGCGCCTGCCGCCCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp CCATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGAGTAAACCAGCAGCTTaGGGAGCTGGGAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: PWATLSPTRSSGWGHQRESKPAA*GAGRWS
Trigger: CGACCACCTCCCAGCTCCCCAAGCTGCTGGTTTACT...CTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAAAGGATCTCCTGTCCATaGGCTGGGGAGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: ATLSPTRSSGWGHQREAQRISCP*AGEQQQ
Trigger: CTGTTGCTGCTCCCCAGCCCATGGACAGGAGATCCT...TTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCACTCGCTCATCTGGCTaGGGTCATCAGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: SPTRSSGWGHQREAQPRITRSSG*GHQREA
Trigger: GGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGT...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GCCAGCCTCTCCAGGGGGCAGCTCTCTTCCCTAGTGGGAAGGTGCCTGTGTGTGCCCTCCTTGGTTAACTaGCCAAACCCCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: ASLSRGQLSSLVGRCLCVPSLVN*PNPWGH
Trigger: ATGGCCCCAGGGGTTTGGTCAGTTAACCAAGGAGGG...CACACACAGGCACCTTCCCACTAGGGAAGAGAGCTGCCCCCTGGAGAGGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR TCA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCACGAGATGTTCGGGTTaGAGCGCTGCATCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: SPTRSSGWGHQREAQPRITRCSG*SAASRW
Trigger: CCAACGGGATGCAGCGCTTCAACCCGAACATCTCGT...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR TCA 90 bp TCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTCTGCATGGTTTGGGGTaGGGCCCAGGGCGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: SNGGSSQTQGNVAGWLLGLHGLG*GPGRQA
Trigger: CGCCTGCCGCCCTGGGCCTCACCCCAAACCATGCAG...ACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp ATCCAGTGCCATTTGCAGGGCAACCAGGGTAGTGTCGTGCGCAGAGTAAACCAGCTGCATGGTTTGGGGTaGGGCCCAGGGCGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: IQCHLQGNQGSVVRRVNQLHGLG*GPGRQA
Trigger: CGCCTGCCGCCCTGGGCCTCACCCCAAACCATGCAG...CTGGTTTACTCTGCGCACGACACTACCCTGGTTGCCCTGCAAATGGCACTGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR TCA 90 bp GAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGCTGCATGGTTTGGGGTaGGGCCCAGGGCGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: ESNGGSSQTQGNVAGWLLLHGLG*GPGRQA
Trigger: CGCCTGCCGCCCTGGGCCTCACCCCAAACCATGCAG...CAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCAGTCCTTTAGCCGGCTaGGACGCTGCATGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: SPTRSSGWGHQREAQPRISPLAG*DAAWFG
Trigger: CCCAAACCATGCAGCGTCTCAGCCGGCTAAAGGACT...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGATCCTAGGTCCTGAGTaGACACTGACTGCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWILGPE*TLTASL
Trigger: TAAACTGGCAGTCAGTGTTCACTCAGGACCTAGGAT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
CDS-3UTR GCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGATTGTAGACATCCAGTaGCATTTGCAGGGCAACCAG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWIVDIQ*HLQGNQ
Trigger: CTGGTTGCCCTGCAAATGGCACTGGATGTCTACAAT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp CACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCGGTGAACGGTCTCCATaGCGGTACAGCAAGGTAACG +
Preference number: 4 (lower is better)
Translates to: HAEPHSLIWLGSSEGGPTGERSP*RYSKVT
Trigger: CGTTACCTTGCTGTACCGCCATGGAGACCGTTCACC...GGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CCA 90 bp ATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCTCATAACGGGGACATaGGCCCAACGGGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: MGHAEPHSLIWLGSSEGGLITGT*AQRELQ
Trigger: CTGAAGTTCCCGTTGGGCCCATGTCCCCGTTATGAG...GCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCTCATAACGGGGACATaGGCCCAACGGGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: HAEPHSLIWLGSSEGGPTLITGT*AQRELQ
Trigger: CTGAAGTTCCCGTTGGGCCCATGTCCCCGTTATGAG...GGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GTTCCCGTGTTTCACAAGCACAGCCTCCCTGGACCTCCCCAGGGGCGTGACGGTACATGGCAGGCGGTGTaGATGCTTCAGGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: VPVFHKHSLPGPPQGRDGTWQAV*MLQGTG
Trigger: TCCTGTGCCCTGAAGCATCCACACCGCCTGCCATGT...ACCGTCACGCCCCTGGGGAGGTCCAGGGAGGCTGTGCTTGTGAAACACGGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR TCA 90 bp GCCCAGCTGAGGGAGAGCAGTTTCCTGATTCGTGTGACAAGCAACTCCCTTCCCCACCATGGGCCACGCTaGGCCCCACTCGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: AQLRESSFLIRVTSNSLPHHGPR*APLAHL
Trigger: CAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGGTG...GGGAAGGGAGTTGCTTGTCACACGAATCAGGAAACTGCTCTCCCTCAGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp ACCCATGAGGGAAGTTCCCGTGTTTCACAAGCACAGCCTCCCTGGACCTCCCCAGTTCTACCGTCCTGGTaGCCTGGGCCTGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: THEGSSRVSQAQPPWTSPVLPSW*PGPACP
Trigger: AGGACAGGCAGGCCCAGGTCACCAGGACGGTAGAAC...TGGGGAGGTCCAGGGAGGCTGTGCTTGTGAAACACGGGAACTTCCCTCATGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR GCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGTCCGGTCAAAGTCTGTaGTTCGCACATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWSGQSL*FAHKPL
Trigger: AAGAGGTTTATGTGCGAAGCACAGACTTTGACCGGA...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR GCA 90 bp GCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAAACATCCAGTGCCATTTaGAGGGCAACCAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: ATLSPTRSSGWGHQREAQTSSAI*RATRVV
Trigger: CACTACCCTGGTTGCCCTGCAAATGGCACTGGATGT...TTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGACATGGCAGGCGGTGTGGATGCTTCAGGGCACAGGAAAGGAAGCTCAGGCACCTGGTGACCTGGGCCTaGCTGTCCTCAGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: RHGRRCGCFRAQERKLRHLVTWA*LSSVMG
Trigger: GCCCATCACTGAGGACAGGCAGGCCCAGGTCACCAG...GTGCCTGAGCTTCCTTTCCTGTGCCCTGAAGCATCCACACCGCCTGCCATGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR CCA 90 bp AGGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACGCCGAGAAGGAGCTaGAGGAGAGCCGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: RERGGGKSCLEKASVQHSTPRRS*RRAARL
Trigger: GAGCCGGGCGGCTCTCCTCCAGCTCCTTCTCGGCGT...GCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACCGCTGCCGCAGGGCCTaGCCCAGTTCCCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GAWRRQILFGESQCPTQHRCRRA*PSSQCC
Trigger: ACAGCACTGGGAACTGGGCCAGGCCCTGCGGCAGCG...GTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp ATTCCAGACGGTCTCCAGTGTCAGGTCTGTAAGCCCTGTCTCGTTGGCCACCATCGCTGCCGCAGGGCCTaGCCCAGTTCCCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: IPDGLQCQVCKPCLVGHHRCRRA*PSSQCC
Trigger: ACAGCACTGGGAACTGGGCCAGGCCCTGCGGCAGCG...ATGGTGGCCAACGAGACAGGGCTTACAGACCTGACACTGGAGACCGTCTGGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp TCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTCGCTGCCGCAGGGCCTaGCCCAGTTCCCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: SNGGSSQTQGNVAGWLLGRCRRA*PSSQCC
Trigger: ACAGCACTGGGAACTGGGCCAGGCCCTGCGGCAGCG...ACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GCGCAGCCCGTGCGTTTGCTCACAGAAGAGTGTGTCATAGACATTCCAGACGGTCGCTGCCGCAGGGCCTaGCCCAGTTCCCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: AQPVRLLTEECVIDIPDGRCRRA*PSSQCC
Trigger: ACAGCACTGGGAACTGGGCCAGGCCCTGCGGCAGCG...ACCGTCTGGAATGTCTATGACACACTCTTCTGTGAGCAAACGCACGGGCTGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp ATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCGGAAATGTGGCTGGCTaGCTGTTGGGTGATCCAGTT +
Preference number: 4 (lower is better)
Translates to: MGHAEPHSLIWLGSSEGGGNVAG*LLGDPV
Trigger: AACTGGATCACCCAACAGCCAGCCAGCCACATTTCC...GCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp ACCCATGAGGGAAGTTCCCGTGTTTCACAAGCACAGCCTCCCTGGACCTCCCCAACCGTCCTGGTGACCTaGGCCTGCCTGTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: THEGSSRVSQAQPPWTSPTVLVT*ACLSSV
Trigger: CACTGAGGACAGGCAGGCCCAGGTCACCAGGACGGT...TGGGGAGGTCCAGGGAGGCTGTGCTTGTGAAACACGGGAACTTCCCTCATGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672787.1
3UTR CAA 72 bp CCAAGGCCACAATCACCTCTGTGTCTGCAGGACCGCTaGCCAGCTGGCACTCCTGCTGCCAATCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: PRPQSPLCLQDR*PAGTPAANPWA
Trigger: TGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATTGTGGCCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR TCA 90 bp GGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACCACCATGGGCCACGCTaGGCCCCACTCGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GAWRRQILFGESQCPTQHHHGPR*APLAHL
Trigger: CAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGGTG...GTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GAGGGAAGTTCCCGTGTTTCACAAGCACAGCCTCCCTGGACCTCCCCAGGGGCGGATCTCTGTCACCCATaGGGGAAGTTCCCGTGTTTC +
Preference number: 4 (lower is better)
Translates to: EGSSRVSQAQPPWTSPGADLCHP*GKFPCF
Trigger: GAAACACGGGAACTTCCCTCATGGGTGACAGAGATC...CGCCCCTGGGGAGGTCCAGGGAGGCTGTGCTTGTGAAACACGGGAACTTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR GCA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCTGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: SPTRSSGWGHQREAQPRICTGIG*HEMFGL
Trigger: CAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCA...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CCTCTGTGTCTGCAGGACCGCTTGCCAGCTGGCACTCCTGCTGCCAATCCTTGGAATCACCTCTGTGTCTaGAGGACCGCTTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PLCLQDRLPAGTPAANPWNHLCV*RTACQL
Trigger: CAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATT...CCAAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGAGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR GCA 90 bp AGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGGTCCTCCCCATCTaGGACGTGGCGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SLMVALARHREMWLAGCWVVLPI*DVAVAR
Trigger: CCTGGCTACCGCCACGTCGCAGATGGGGAGGACCAC...CCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GGGAGCTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTGTGGTCCTCCCCATCTaGGACGTGGCGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GSCPSPILGHSLELSFPAVVLPI*DVAVAR
Trigger: CCTGGCTACCGCCACGTCGCAGATGGGGAGGACCAC...AGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAGCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGTGGTCCTCCCCATCTaGGACGTGGCGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: ESNGGSSQTQGNVAGWLLVVLPI*DVAVAR
Trigger: CCTGGCTACCGCCACGTCGCAGATGGGGAGGACCAC...CAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGCAGGCGCAGCCCGTaGGTTTGCCTGTCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: ESNGGSSQTQGNVAGWLLGRRSP*VCLSSV
Trigger: CACTGAGGACAGGCAAACGCACGGGCTGCGCCTGCC...CAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529444.7
CDS-3UTR CCA 90 bp CTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAATCCTACGCCGAGAAGGAGCTaGAGGAGAGCCGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LTASLHLRCVGSVEEANPTPRRS*RRAARL
Trigger: GAGCCGGGCGGCTCTCCTCCAGCTCCTTCTCGGCGT...AGGATTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTGACTCCGGGCCCGGGTaGGCGGCATCACCACCAGGT +
Preference number: 4 (lower is better)
Translates to: VEEANPVWRKPVSNTALGDSGPG*AASPPG
Trigger: ACCTGGTGGTGATGCCGCCCACCCGGGCCCGGAGTC...ACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CCTGAAGCCGGGCCTTCTCCGCCTGCTGGTAGATTCCGAAGAGGAAGCGGAAGCGGTGAACGGTCTCCATaGCGGTACAGCAAGGTAACG +
Preference number: 4 (lower is better)
Translates to: PEAGPSPPAGRFRRGSGSGERSP*RYSKVT
Trigger: CGTTACCTTGCTGTACCGCCATGGAGACCGTTCACC...GCTTCCGCTTCCTCTTCGGAATCTACCAGCAGGCGGAGAAGGCCCGGCTTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp GCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCTGATAGGGGTCCTTaGGATATGTCTTCACTGGTG +
Preference number: 4 (lower is better)
Translates to: ATLSPTRSSGWGHQREAQPDRGP*DMSSLV
Trigger: CACCAGTGAAGACATATCCCAAGGACCCCTATCAGG...TTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGAGACGCTGCATGGTTTaGGGTGAGGCCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSESNGGSSQTQGNVAGWRRCMV*GEAQGG
Trigger: GCCGCCCTGGGCCTCACCCCAAACCATGCAGCGTCT...CCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCAGACGCTGCATGGTTTaGGGTGAGGCCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RERGGGKSCLEKASVQHSRRCMV*GEAQGG
Trigger: GCCGCCCTGGGCCTCACCCCAAACCATGCAGCGTCT...GCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCGGAAATGTGGCTGGCTaGCTGTTGGGTGATCCAGTT +
Preference number: 4 (lower is better)
Translates to: SPTRSSGWGHQREAQPRIGNVAG*LLGDPV
Trigger: AACTGGATCACCCAACAGCCAGCCAGCCACATTTCC...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCATATGTCTTCACTGGTaGACGGTCTCCATGGCGGTA +
Preference number: 4 (lower is better)
Translates to: SPTRSSGWGHQREAQPRIICLHW*TVSMAV
Trigger: TACCGCCATGGAGACCGTTCACCAGTGAAGACATAT...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GTACAGTTCAAATATGTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACCTGCATGGTTTGGGGTaGGGCCCAGGGCGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: VQFKYVAGGVGGLFTIVDLHGLG*GPGRQA
Trigger: CGCCTGCCGCCCTGGGCCTCACCCCAAACCATGCAG...GTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCCACATATTTGAACTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR TCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGAAAGTACATCTCCACTaGGAAATTCCCAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWKVHLH*EIPRIF
Trigger: GAAGATTCTGGGAATTTCTCAGTGGAGATGTACTTT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR TCA 90 bp AGGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCGCACGACGGGCTCTGTaGGGCGAAGGAAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RERGGGKSCLEKASVQHSARRAL*GEGSPA
Trigger: TGCAGGACTTCCTTCGCCTCACAGAGCCCGTCGTGC...GCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGATCCAGTTCCTTGCACGACGGGCTCTGTaGGGCGAAGGAAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LARHREMWLAGCWVIQFLARRAL*GEGSPA
Trigger: TGCAGGACTTCCTTCGCCTCACAGAGCCCGTCGTGC...AAGGAACTGGATCACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGTGGAGGGAAGGGGGCTaGGTGGTTGTCAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: ESNGGSSQTQGNVAGWLLWREGG*VVVRRG
Trigger: ACCACGCCTGACAACCACTCAGCCCCCTTCCCTCCA...CAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCATGGAGGGAAGGGGGCTaGGTGGTTGTCAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: GSVEEANPVWRKPVSNTAWREGG*VVVRRG
Trigger: ACCACGCCTGACAACCACTCAGCCCCCTTCCCTCCA...TGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp ATTCCGAAGAGGAAGCGGAAGCTGAAGTCCTTTAGCCGGCTGAGACGCTGCATGTGGAGGGAAGGGGGCTaGGTGGTTGTCAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: IPKRKRKLKSFSRLRRCMWREGG*VVVRRG
Trigger: ACCACGCCTGACAACCACTCAGCCCCCTTCCCTCCA...CATGCAGCGTCTCAGCCGGCTAAAGGACTTCAGCTTCCGCTTCCTCTTCGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR TCA 90 bp GCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAAGTCCTGAGTGAACACTaGCTGCCAGTTTACATCTCA +
Preference number: 4 (lower is better)
Translates to: ATLSPTRSSGWGHQREAQVLSEH*LPVYIS
Trigger: TGAGATGTAAACTGGCAGTCAGTGTTCACTCAGGAC...TTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CCATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGATCCTAGGTCCTGAGTaGACACTGACTGCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: PWATLSPTRSSGWGHQREILGPE*TLTASL
Trigger: TAAACTGGCAGTCAGTGTTCACTCAGGACCTAGGAT...CTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACCGCTGGGTGGCACCTaGAAGCAGCCGCCCGGACGC +
Preference number: 4 (lower is better)
Translates to: EEANPVWRKPVSNTALGKPLGGT*KQPPGR
Trigger: GCGTCCGGGCGGCTGCTTGCAGGTGCCACCCAGCGG...TTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256997.9
CDS-3UTR GCA 90 bp AGACATGGCAGGCGGTGTGGATGCTTCAGGGCACAGGAAAGGAAGCTCAGGCACTTCGGGTTGAAGCGCTaGATCCCGTTGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RHGRRCGCFRAQERKLRHFGLKR*IPLGGK
Trigger: CTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAA...GTGCCTGAGCTTCCTTTCCTGTGCCCTGAAGCATCCACACCGCCTGCCATGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR GCA 90 bp AACCAGGGTAGTGTCGTGCGCAGAGTAAACCAGCAGCTTGGGGAGCTGGGAGGTTTCGGGTTGAAGCGCTaGATCCCGTTGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: NQGSVVRRVNQQLGELGGFGLKR*IPLGGK
Trigger: CTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAA...ACCTCCCAGCTCCCCAAGCTGCTGGTTTACTCTGCGCACGACACTACCCTGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp GGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGCAAGCCGGCTGAGACGCTaGATGGTTTGGGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: GRRRRGLVHHCRHPVPFASRLRR*MVWGEA
Trigger: GGCCTCACCCCAAACCATGCAGCGTCTCAGCCGGCT...TGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp CACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCATTGTAGACATCCAGTaGCATTTGCAGGGCAACCAG +
Preference number: 4 (lower is better)
Translates to: HAEPHSLIWLGSSEGGPTIVDIQ*HLQGNQ
Trigger: CTGGTTGCCCTGCAAATGGCACTGGATGTCTACAAT...GGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGAGCTGGCACTCCTGCTaGCAATCCTTGGGCACGACG +
Preference number: 4 (lower is better)
Translates to: LMVALARHREMWLAGCWVSWHSC*QSLGTT
Trigger: CGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCT...CACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAATCCTGTGGTCCTCCCCATCTaGGACGTGGCGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LTASLHLRCVGSVEEANPVVLPI*DVAVAR
Trigger: CCTGGCTACCGCCACGTCGCAGATGGGGAGGACCAC...AGGATTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp TGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAGACTCCGGGCCCGGGTaGGCGGCATCACCACCAGGT +
Preference number: 4 (lower is better)
Translates to: WRRQILFGESQCPTQHLVDSGPG*AASPPG
Trigger: ACCTGGTGGTGATGCCGCCCACCCGGGCCCGGAGTC...TACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGGAAAGGAAGCTCAGGCACAAAAAGTGAGACTCAGCAGAAAGGAGCTCTGGGTGACTCCGGGCCCGGGTaGGCGGCATCACCACCAGGT +
Preference number: 4 (lower is better)
Translates to: RKGSSGTKSETQQKGALGDSGPG*AASPPG
Trigger: ACCTGGTGGTGATGCCGCCCACCCGGGCCCGGAGTC...ACCCAGAGCTCCTTTCTGCTGAGTCTCACTTTTTGTGCCTGAGCTTCCTTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR CCA 90 bp GCAGCCCGTGCGTTTGCTCACAGAAGAGTGTGTCATAGACATTCCAGACGGTCTAGACGCTGCATGGTTTaGGGTGAGGCCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: AARAFAHRRVCHRHSRRSRRCMV*GEAQGG
Trigger: GCCGCCCTGGGCCTCACCCCAAACCATGCAGCGTCT...AGACCGTCTGGAATGTCTATGACACACTCTTCTGTGAGCAAACGCACGGGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGTTCCCAGAATCTTCCTaGTACAGTTCAAATATGTGG +
Preference number: 4 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWFPESS*YSSNMW
Trigger: CCACATATTTGAACTGTACCAGGAAGATTCTGGGAA...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CCA 90 bp AGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTTCAGGCGGACCGCTTGCCAGCTaGCACTCCTGCTGCCAATCC +
Preference number: 4 (lower is better)
Translates to: STERQDRVPLSYLPKTSGGPLAS*HSCCQS
Trigger: GGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCC...GCCTGAAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGAGTGGTTGTCAGGCGTaGTCCTCCCCATCTGCGACG +
Preference number: 4 (lower is better)
Translates to: LMVALARHREMWLAGCWVSGCQA*SSPSAT
Trigger: CGTCGCAGATGGGGAGGACCACGCCTGACAACCACT...CACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GCCCAGCTGAGGGAGAGCAGTTTCCTGATTCGTGTGACAAGCAACTCCCTTCCCAGTGGTTGTCAGGCGTaGTCCTCCCCATCTGCGACG +
Preference number: 4 (lower is better)
Translates to: AQLRESSFLIRVTSNSLPSGCQA*SSPSAT
Trigger: CGTCGCAGATGGGGAGGACCACGCCTGACAACCACT...GGGAAGGGAGTTGCTTGTCACACGAATCAGGAAACTGCTCTCCCTCAGCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CCCTCCCAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGCCCCACTCGCTCATCTaGCTGGGGTCATCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PSQVQTTFRPAPVEGVTTPHSLI*LGSSEG
Trigger: TCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGG...CGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCGAGGCAAATCCTGTTTaGAGAAAGCCAGTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: HAEPHSLIWLGSSEGGPTEANPV*RKPVSN
Trigger: GTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC...GGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCGATAGAAGTGCAAGGTaGATCCAGCACCAACTCTGC +
Preference number: 4 (lower is better)
Translates to: SPTRSSGWGHQREAQPRIDRSAR*IQHQLC
Trigger: GCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATC...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GCCCAGCTGAGGGAGAGCAGTTTCCTGATTCGTGTGACAAGCAACTCCCTTCCCCCCTCCTTGGTTAACTaGCCAAACCCCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: AQLRESSFLIRVTSNSLPPSLVN*PNPWGH
Trigger: ATGGCCCCAGGGGTTTGGTCAGTTAACCAAGGAGGG...GGGAAGGGAGTTGCTTGTCACACGAATCAGGAAACTGCTCTCCCTCAGCTGGGC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GATCCAGTTCCTTGGGAGCCAATGTTTGTACCCCTGGTATTAGCTGTTTTTCCCCTGCATGGTTTGGGGTaGGGCCCAGGGCGGCAGGCG +
Preference number: 4 (lower is better)
Translates to: DPVPWEPMFVPLVLAVFPLHGLG*GPGRQA
Trigger: CGCCTGCCGCCCTGGGCCTCACCCCAAACCATGCAG...GGGAAAAACAGCTAATACCAGGGGTACAAACATTGGCTCCCAAGGAACTGGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAATCCTTGGAGGGAAGGGGGCTaGGTGGTTGTCAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: LTASLHLRCVGSVEEANPWREGG*VVVRRG
Trigger: ACCACGCCTGACAACCACTCAGCCCCCTTCCCTCCA...AGGATTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTCATGGGAATGCTGAGTaGCAGGCACCATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: LSLMVALARHREMWLAGCHGNAE*QAPWAT
Trigger: CGTGGCCCATGGTGCCTGTCACTCAGCATTCCCATG...ACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGTCCGGTCAAAGTCTGTaGTTCGCACATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: AEPHSLIWLGSSEGGPTQSGQSL*FAHKPL
Trigger: AAGAGGTTTATGTGCGAAGCACAGACTTTGACCGGA...CTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CACCTCTGTGTCTGCAGGACCGCTTGCCAGCTGGCACTCCTGCTGCCAATCCTTTGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: HLCVCRTACQLALLLPILCTGIG*HEMFGL
Trigger: CAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCA...AAGGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR GCA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCATTGTAGACATCCAGTaGCATTTGCAGGGCAACCAG +
Preference number: 4 (lower is better)
Translates to: SPTRSSGWGHQREAQPRIIVDIQ*HLQGNQ
Trigger: CTGGTTGCCCTGCAAATGGCACTGGATGTCTACAAT...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCAAGCTGGCACTCCTGCTaGCAATCCTTGGGCACGACG +
Preference number: 4 (lower is better)
Translates to: GSVEEANPVWRKPVSNTASWHSC*QSLGTT
Trigger: CGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCT...TGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGATCCAGTTCCTTAGCTGGCACTCCTGCTaGCAATCCTTGGGCACGACG +
Preference number: 4 (lower is better)
Translates to: LARHREMWLAGCWVIQFLSWHSC*QSLGTT
Trigger: CGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCT...AAGGAACTGGATCACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAATCCTGCCAGCTGGCACTCCTaGTGCCAATCCTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: LTASLHLRCVGSVEEANPASWHS*CQSLGT
Trigger: CGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGC...AGGATTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAATCCTGTCTGCAGGACCGCTTaGCAGCTGGCACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LTASLHLRCVGSVEEANPVCRTA*QLALLL
Trigger: CAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGAC...AGGATTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTGTGGTCCTCCCCATCTaGGACGTGGCGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VEEANPVWRKPVSNTALGVVLPI*DVAVAR
Trigger: CCTGGCTACCGCCACGTCGCAGATGGGGAGGACCAC...ACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTCTGGAACCCGCTGGGTaGCACCTGCAAGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: GPQSRTFFSSSQPACSSGLEPAG*HLQAAA
Trigger: GGCGGCTGCTTGCAGGTGCCACCCAGCGGGTTCCAG...ACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000256997.9
CDS-3UTR CCA 90 bp TGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAACGCCGAGAAGGAGCTaGAGGAGAGCCGCCCGGCTC +
Preference number: 4 (lower is better)
Translates to: WRRQILFGESQCPTQHLVTPRRS*RRAARL
Trigger: GAGCCGGGCGGCTCTCCTCCAGCTCCTTCTCGGCGT...TACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AAAATAAGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTGACTCCGGGCCCGGGTaGGCGGCATCACCACCAGGT +
Preference number: 4 (lower is better)
Translates to: KISTERQDRVPLSYLPKTDSGPG*AASPPG
Trigger: ACCTGGTGGTGATGCCGCCCACCCGGGCCCGGAGTC...AGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCTTATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGGAGCTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTAGCGCTGCATCCCGTTaGGAGGGAAGAGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GSCPSPILGHSLELSFPASAASR*EGRVQP
Trigger: TGGCTGGACTCTTCCCTCCCAACGGGATGCAGCGCT...AGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGCAGGGCAACCAGGGTAGCGCTGCATCCCGTTaGGAGGGAAGAGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GGLFTIVDIQCHLQGNQGSAASR*EGRVQP
Trigger: TGGCTGGACTCTTCCCTCCCAACGGGATGCAGCGCT...ACCCTGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp GGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTGGGGAGCTGGGAGGTaGTCGCCATTAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GAWRRQILFGESQCPTQHWGAGR*SPLGSG
Trigger: ACCTGACCCTAATGGCGACCACCTCCCAGCTCCCCA...GTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCATGGGGAGCTGGGAGGTaGTCGCCATTAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: GSVEEANPVWRKPVSNTAWGAGR*SPLGSG
Trigger: ACCTGACCCTAATGGCGACCACCTCCCAGCTCCCCA...TGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCAGCAGCTTGGGGAGCTaGGAGGTGGTCGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: RERGGGKSCLEKASVQHSSSLGS*EVVAIR
Trigger: CCTAATGGCGACCACCTCCCAGCTCCCCAAGCTGCT...GCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTTCAGGCAGCAGCTTGGGGAGCTaGGAGGTGGTCGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: STERQDRVPLSYLPKTSGSSLGS*EVVAIR
Trigger: CCTAATGGCGACCACCTCCCAGCTCCCCAAGCTGCT...GCCTGAAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGCAAGCAGCTTGGGGAGCTaGGAGGTGGTCGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: GRRRRGLVHHCRHPVPFASSLGS*EVVAIR
Trigger: CCTAATGGCGACCACCTCCCAGCTCCCCAAGCTGCT...TGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp GAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGCCCCACTCGCTCATCTaGCTGGGGTCATCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: ESNGGSSQTQGNVAGWLLPHSLI*LGSSEG
Trigger: TCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGG...CAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACCCCCACTCGCTCATCTaGCTGGGGTCATCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: GAWRRQILFGESQCPTQHPHSLI*LGSSEG
Trigger: TCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGG...GTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCGAGGCAAATCCTGTTTaGAGAAAGCCAGTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: SPTRSSGWGHQREAQPRIEANPV*RKPVSN
Trigger: GTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AGGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACGAGATGTTCGGGTTaGAGCGCTGCATCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: RERGGGKSCLEKASVQHSTRCSG*SAASRW
Trigger: CCAACGGGATGCAGCGCTTCAACCCGAACATCTCGT...GCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACACGAGATGTTCGGGTTaGAGCGCTGCATCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: GAWRRQILFGESQCPTQHTRCSG*SAASRW
Trigger: CCAACGGGATGCAGCGCTTCAACCCGAACATCTCGT...GTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGACGAGATGTTCGGGTTaGAGCGCTGCATCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: VAGGVGGLFTIVDIQCHLTRCSG*SAASRW
Trigger: CCAACGGGATGCAGCGCTTCAACCCGAACATCTCGT...CAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR TCA 90 bp GTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGAGTCCTTTAGCCGGCTaGGACGCTGCATGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: VAGGVGGLFTIVDIQCHLSPLAG*DAAWFG
Trigger: CCCAAACCATGCAGCGTCTCAGCCGGCTAAAGGACT...CAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR TCA 90 bp GGGAGCTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTAGTCCTTTAGCCGGCTaGGACGCTGCATGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: GSCPSPILGHSLELSFPASPLAG*DAAWFG
Trigger: CCCAAACCATGCAGCGTCTCAGCCGGCTAAAGGACT...AGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGATTCCTGCACGACGGGCTCTGTaGGGCGAAGGAAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QVQTTFRPAPVEGVTTIPARRAL*GEGSPA
Trigger: TGCAGGACTTCCTTCGCCTCACAGAGCCCGTCGTGC...AGGAATCGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AACACTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAAGCACGACGGGCTCTGTaGGGCGAAGGAAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: NTDCQFTSQVCRERGGGKARRAL*GEGSPA
Trigger: TGCAGGACTTCCTTCGCCTCACAGAGCCCGTCGTGC...TTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGTGCTCCTGTCCTCAGTaGTGGGCACAGTGTGCACAG +
Preference number: 4 (lower is better)
Translates to: VAGGVGGLFTIVDIQCHLCSCPQ*WAQCAQ
Trigger: CTGTGCACACTGTGCCCATCACTGAGGACAGGAGCA...CAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673511.1
CDS-3UTR GCA 90 bp CTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGCCCAGTTCCCAGTaGTGTAGCATCCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LSLMVALARHREMWLAGCWPSSQ*CSIPSL
Trigger: CAAGGAGGGGATGCTACAGCACTGGGAACTGGGCCA...ACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTTCAGGCTGGCCCAGTTCCCAGTaGTGTAGCATCCCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: STERQDRVPLSYLPKTSGWPSSQ*CSIPSL
Trigger: CAAGGAGGGGATGCTACAGCACTGGGAACTGGGCCA...GCCTGAAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTCGGGTTGAAGCGCTaGATCCCGTTGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GAWRRQILFGESQCPTQHFGLKR*IPLGGK
Trigger: CTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAA...GTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCTTCGGGTTGAAGCGCTaGATCCCGTTGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RERGGGKSCLEKASVQHSFGLKR*IPLGGK
Trigger: CTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAA...GCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CCAGCAGCTTGGGGAGCTGGGAGGTGGTCGCCATTAGGGTCAGGTTCTTCCTTATGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: PAAWGAGRWSPLGSGSSLCTGIG*HEMFGL
Trigger: CAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCA...TAAGGAAGAACCTGACCCTAATGGCGACCACCTCCCAGCTCCCCAAGCTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp CGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGCAGGGCAACCAGGCAGGCGCAGCCCGTaGGTTTGCTCACAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RRGLVHHCRHPVPFAGQPGRRSP*VCSQKS
Trigger: ACTCTTCTGTGAGCAAACGCACGGGCTGCGCCTGCC...TGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp GCCCGTGCGTTTGCTCACAGAAGAGTGTGTCATAGACATTCCAGACGGTCTCCAAGCTGGCACTCCTGCTaGCAATCCTTGGGCACGACG +
Preference number: 4 (lower is better)
Translates to: ARAFAHRRVCHRHSRRSPSWHSC*QSLGTT
Trigger: CGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCT...TGGAGACCGTCTGGAATGTCTATGACACACTCTTCTGTGAGCAAACGCACGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR GCA 90 bp CAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGATTCCTGTCTGCAGGACCGCTTaGCAGCTGGCACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QVQTTFRPAPVEGVTTIPVCRTA*QLALLL
Trigger: CAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGAC...AGGAATCGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGAATCACCTCTGTGTCTaGAGGACCGCTTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LMVALARHREMWLAGCWVNHLCV*RTACQL
Trigger: CAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATT...CACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTCATTCTCTGGGAGCTaGCCCAGCCCTATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: LSLMVALARHREMWLAGCSFSGS*PSPILG
Trigger: GCCCAGAATAGGGCTGGGGCAGCTCCCAGAGAATGA...ACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGAAATTCCCAGAATCTTCCTGGTACAGTTCAAATATGTGGCAGGAGGCGTAGGGACTCCGGGCCCGGGTaGGCGGCATCACCACCAGGT +
Preference number: 4 (lower is better)
Translates to: RNSQNLPGTVQICGRRRRDSGPG*AASPPG
Trigger: ACCTGGTGGTGATGCCGCCCACCCGGGCCCGGAGTC...CCTACGCCTCCTGCCACATATTTGAACTGTACCAGGAAGATTCTGGGAATTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp TCTGTCACCCATGAGGGAAGTTCCCGTGTTTCACAAGCACAGCCTCCCTGGACCGGTGAACGGTCTCCATaGCGGTACAGCAAGGTAACG +
Preference number: 4 (lower is better)
Translates to: SVTHEGSSRVSQAQPPWTGERSP*RYSKVT
Trigger: CGTTACCTTGCTGTACCGCCATGGAGACCGTTCACC...GGTCCAGGGAGGCTGTGCTTGTGAAACACGGGAACTTCCCTCATGGGTGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR CCA 90 bp GGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTCAGACGCTGCATGGTTTaGGGTGAGGCCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: GHSLELSFPAHNLHVAQVRRCMV*GEAQGG
Trigger: GCCGCCCTGGGCCTCACCCCAAACCATGCAGCGTCT...GACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGAGTAAACCAGCAGCTTaGGGAGCTGGGAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: ESNGGSSQTQGNVAGWLLSKPAA*GAGRWS
Trigger: CGACCACCTCCCAGCTCCCCAAGCTGCTGGTTTACT...CAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTGGACCGCTTGCCAGCTaGCACTCCTGCTGCCAATCC +
Preference number: 4 (lower is better)
Translates to: VEEANPVWRKPVSNTALGGPLAS*HSCCQS
Trigger: GGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCC...ACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGATTCCTGGACCGCTTGCCAGCTaGCACTCCTGCTGCCAATCC +
Preference number: 4 (lower is better)
Translates to: QVQTTFRPAPVEGVTTIPGPLAS*HSCCQS
Trigger: GGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCC...AGGAATCGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCAAGGATCTCCTGTCCATaGGCTGGGGAGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: GSVEEANPVWRKPVSNTARISCP*AGEQQQ
Trigger: CTGTTGCTGCTCCCCAGCCCATGGACAGGAGATCCT...TGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GCCCGTGCGTTTGCTCACAGAAGAGTGTGTCATAGACATTCCAGACGGTCTCCACCCTCCTTGGTTAACTaGCCAAACCCCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: ARAFAHRRVCHRHSRRSPPSLVN*PNPWGH
Trigger: ATGGCCCCAGGGGTTTGGTCAGTTAACCAAGGAGGG...TGGAGACCGTCTGGAATGTCTATGACACACTCTTCTGTGAGCAAACGCACGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR TCA 90 bp CTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAATCCTAGTCCTTTAGCCGGCTaGGACGCTGCATGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LTASLHLRCVGSVEEANPSPLAG*DAAWFG
Trigger: CCCAAACCATGCAGCGTCTCAGCCGGCTAAAGGACT...AGGATTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CCATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGAAAGTACATCTCCACTaGGAAATTCCCAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: PWATLSPTRSSGWGHQREKVHLH*EIPRIF
Trigger: GAAGATTCTGGGAATTTCTCAGTGGAGATGTACTTT...CTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAAAAAGTACATCTCCACTaGGAAATTCCCAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: ATLSPTRSSGWGHQREAQKVHLH*EIPRIF
Trigger: GAAGATTCTGGGAATTTCTCAGTGGAGATGTACTTT...TTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACCACCATGGGCCACGCTaGGCCCCACTCGCTCATCTG +
Preference number: 4 (lower is better)
Translates to: RRQILFGESQCPTQHLVNHHGPR*APLAHL
Trigger: CAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGGTG...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp ATTCCCAGAATCTTCCTGGTACAGTTCAAATATGTGGCAGGAGGCGTAGGGGGCCATGGGAATGCTGAGTaGCAGGCACCATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: IPRIFLVQFKYVAGGVGGHGNAE*QAPWAT
Trigger: CGTGGCCCATGGTGCCTGTCACTCAGCATTCCCATG...GCCCCCTACGCCTCCTGCCACATATTTGAACTGTACCAGGAAGATTCTGGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR GCA 90 bp GGTAGTGTCGTGCGCAGAGTAAACCAGCAGCTTGGGGAGCTGGGAGGTGGTCGCTCCGGTCAAAGTCTGTaGTTCGCACATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: GSVVRRVNQQLGELGGGRSGQSL*FAHKPL
Trigger: AAGAGGTTTATGTGCGAAGCACAGACTTTGACCGGA...GCGACCACCTCCCAGCTCCCCAAGCTGCTGGTTTACTCTGCGCACGACACTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp ATCAGTCCAATAGGAAACAGCACTATTCATTCTCTGGGAGCTGCCCCAGCCCTAAGCCGGCTGAGACGCTaGATGGTTTGGGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: ISPIGNSTIHSLGAAPALSRLRR*MVWGEA
Trigger: GGCCTCACCCCAAACCATGCAGCGTCTCAGCCGGCT...TAGGGCTGGGGCAGCTCCCAGAGAATGAATAGTGCTGTTTCCTATTGGACTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CTGGTACAGTTCAAATATGTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAAGCCGGCTGAGACGCTaGATGGTTTGGGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: LVQFKYVAGGVGGLFTIVSRLRR*MVWGEA
Trigger: GGCCTCACCCCAAACCATGCAGCGTCTCAGCCGGCT...TACAATGGTGAACAAGCCCCCTACGCCTCCTGCCACATATTTGAACTGTACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp CAGTCCAATAGGAAACAGCACTATTCATTCTCTGGGAGCTGCCCCAGCCCTATTAGCCGGCTGAGACGCTaGATGGTTTGGGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: QSNRKQHYSFSGSCPSPISRLRR*MVWGEA
Trigger: GGCCTCACCCCAAACCATGCAGCGTCTCAGCCGGCT...AATAGGGCTGGGGCAGCTCCCAGAGAATGAATAGTGCTGTTTCCTATTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GCCCAGCTGAGGGAGAGCAGTTTCCTGATTCGTGTGACAAGCAACTCCCTTCCCACATCCAGTGCCATTTaGAGGGCAACCAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: AQLRESSFLIRVTSNSLPTSSAI*RATRVV
Trigger: CACTACCCTGGTTGCCCTGCAAATGGCACTGGATGT...GGGAAGGGAGTTGCTTGTCACACGAATCAGGAAACTGCTCTCCCTCAGCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CCTGAAGCATTCTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGGCCAGCTGGCACTCCTaGTGCCAATCCTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: PEAFCLSLMVALARHREMASWHS*CQSLGT
Trigger: CGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGC...CATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAGAATGCTTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTGCCAGCTGGCACTCCTaGTGCCAATCCTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: GPQSRTFFSSSQPACSSGASWHS*CQSLGT
Trigger: CGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGC...ACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGCATTCTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGTCTGCAGGACCGCTTaGCAGCTGGCACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SILSESNGGSSQTQGNVAVCRTA*QLALLL
Trigger: CAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGAC...AGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAGAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTAATCACCTCTGTGTCTaGAGGACCGCTTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LSLMVALARHREMWLAGCNHLCV*RTACQL
Trigger: CAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATT...ACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCAATCACCTCTGTGTCTaGAGGACCGCTTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RERGGGKSCLEKASVQHSNHLCV*RTACQL
Trigger: CAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATT...GCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GTATTAGCTGTTTTTCCCACTAAAATAAGCACTGAGAGGCAAGACCGTGTCCCTGACTCCGGGCCCGGGTaGGCGGCATCACCACCAGGT +
Preference number: 4 (lower is better)
Translates to: VLAVFPTKISTERQDRVPDSGPG*AASPPG
Trigger: ACCTGGTGGTGATGCCGCCCACCCGGGCCCGGAGTC...AGGGACACGGTCTTGCCTCTCAGTGCTTATTTTAGTGGGAAAAACAGCTAATAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CGTTCCGAAAGTACATCTCCACTGAGAAATTCCCAGAATCTTCCTGGTACAGTTGACTCCGGGCCCGGGTaGGCGGCATCACCACCAGGT +
Preference number: 4 (lower is better)
Translates to: RSESTSPLRNSQNLPGTVDSGPG*AASPPG
Trigger: ACCTGGTGGTGATGCCGCCCACCCGGGCCCGGAGTC...AACTGTACCAGGAAGATTCTGGGAATTTCTCAGTGGAGATGTACTTTCGGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp CTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGATCCAGTTCCTTGGTGAACGGTCTCCATaGCGGTACAGCAAGGTAACG +
Preference number: 4 (lower is better)
Translates to: LARHREMWLAGCWVIQFLGERSP*RYSKVT
Trigger: CGTTACCTTGCTGTACCGCCATGGAGACCGTTCACC...AAGGAACTGGATCACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGCAGGTGAACGGTCTCCATaGCGGTACAGCAAGGTAACG +
Preference number: 4 (lower is better)
Translates to: GRRRRGLVHHCRHPVPFAGERSP*RYSKVT
Trigger: CGTTACCTTGCTGTACCGCCATGGAGACCGTTCACC...TGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp GGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCAGGTGAACGGTCTCCATaGCGGTACAGCAAGGTAACG +
Preference number: 4 (lower is better)
Translates to: GSVEEANPVWRKPVSNTAGERSP*RYSKVT
Trigger: CGTTACCTTGCTGTACCGCCATGGAGACCGTTCACC...TGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp TGTCGTGCGCAGAGTAAACCAGCAGCTTGGGGAGCTGGGAGGTGGTCGCCATTACCTGATAGGGGTCCTTaGGATATGTCTTCACTGGTG +
Preference number: 4 (lower is better)
Translates to: CRAQSKPAAWGAGRWSPLPDRGP*DMSSLV
Trigger: CACCAGTGAAGACATATCCCAAGGACCCCTATCAGG...TAATGGCGACCACCTCCCAGCTCCCCAAGCTGCTGGTTTACTCTGCGCACGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp GAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATCGCTGCCGCAGGGCCTaGCCCAGTTCCCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: EANPVWRKPVSNTALGKHRCRRA*PSSQCC
Trigger: ACAGCACTGGGAACTGGGCCAGGCCCTGCGGCAGCG...ATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAGCGCTGCATCCCGTTaGGAGGGAAGAGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VEEANPVWRKPVSNTALGSAASR*EGRVQP
Trigger: TGGCTGGACTCTTCCCTCCCAACGGGATGCAGCGCT...ACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGCTCATAACGGGGACATaGGCCCAACGGGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: SLMVALARHREMWLAGCWLITGT*AQRELQ
Trigger: CTGAAGTTCCCGTTGGGCCCATGTCCCCGTTATGAG...CCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GATCCAGTTCCTTGGGAGCCAATGTTTGTACCCCTGGTATTAGCTGTTTTTCCCAGACGCTGCATGGTTTaGGGTGAGGCCCAGGGCGGC +
Preference number: 4 (lower is better)
Translates to: DPVPWEPMFVPLVLAVFPRRCMV*GEAQGG
Trigger: GCCGCCCTGGGCCTCACCCCAAACCATGCAGCGTCT...GGGAAAAACAGCTAATACCAGGGGTACAAACATTGGCTCCCAAGGAACTGGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAATGGGGAGCTGGGAGGTaGTCGCCATTAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LPQPYSGPQSRTFFSSSQWGAGR*SPLGSG
Trigger: ACCTGACCCTAATGGCGACCACCTCCCAGCTCCCCA...TTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GCCCGTGCGTTTGCTCACAGAAGAGTGTGTCATAGACATTCCAGACGGTCTCCAAGTAAACCAGCAGCTTaGGGAGCTGGGAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: ARAFAHRRVCHRHSRRSPSKPAA*GAGRWS
Trigger: CGACCACCTCCCAGCTCCCCAAGCTGCTGGTTTACT...TGGAGACCGTCTGGAATGTCTATGACACACTCTTCTGTGAGCAAACGCACGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp CTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAATCCTAGGATCTCCTGTCCATaGGCTGGGGAGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: LTASLHLRCVGSVEEANPRISCP*AGEQQQ
Trigger: CTGTTGCTGCTCCCCAGCCCATGGACAGGAGATCCT...AGGATTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGATTCCTACTCGCTCATCTGGCTaGGGTCATCAGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QVQTTFRPAPVEGVTTIPTRSSG*GHQREA
Trigger: GGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGT...AGGAATCGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AACACTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAACCCCACTCGCTCATCTaGCTGGGGTCATCAGAGGGA +
Preference number: 4 (lower is better)
Translates to: NTDCQFTSQVCRERGGGKPHSLI*LGSSEG
Trigger: TCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGG...TTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTTCAGGCAGACACAGGGAAATGTaGCTGGCTGGCTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: STERQDRVPLSYLPKTSGRHREM*LAGCWV
Trigger: CACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCT...GCCTGAAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACAGACACAGGGAAATGTaGCTGGCTGGCTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: GAWRRQILFGESQCPTQHRHREM*LAGCWV
Trigger: CACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCT...GTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CCATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGAATTGCTATGAAAAATaGATCAGGGTCTCAGTCCCT +
Preference number: 4 (lower is better)
Translates to: PWATLSPTRSSGWGHQRENCYEK*IRVSVP
Trigger: AGGGACTGAGACCCTGATCCATTTTTCATAGCAATT...CTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000672075.1
3UTR CAA 72 bp GGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTaGCAGGGCAACCAGGGTAGTGTCGTGCGCAGAGTA +
Preference number: 4 (lower is better)
Translates to: GGLFTIVDIQCH*QGNQGSVVRRV
Trigger: TACTCTGCGCACGACACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR TCA 90 bp AACACTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAACCCTCCTTGGTTAACTaGCCAAACCCCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: NTDCQFTSQVCRERGGGKPSLVN*PNPWGH
Trigger: ATGGCCCCAGGGGTTTGGTCAGTTAACCAAGGAGGG...TTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GGGCACAGGAAAGGAAGCTCAGGCACAAAAAGTGAGACTCAGCAGAAAGGAGCTACGAGATGTTCGGGTTaGAGCGCTGCATCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: GHRKGSSGTKSETQQKGATRCSG*SAASRW
Trigger: CCAACGGGATGCAGCGCTTCAACCCGAACATCTCGT...AGCTCCTTTCTGCTGAGTCTCACTTTTTGTGCCTGAGCTTCCTTTCCTGTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR TCA 90 bp CTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTCGAGAACTCTCATTCTaGTACTCTGGTGTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: LSLMVALARHREMWLAGCRELSF*YSGVCR
Trigger: CCGGCAGACACCAGAGTATCAGAATGAGAGTTCTCG...ACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AGGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCCGAGAACTCTCATTCTaGTACTCTGGTGTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: RERGGGKSCLEKASVQHSRELSF*YSGVCR
Trigger: CCGGCAGACACCAGAGTATCAGAATGAGAGTTCTCG...GCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACCGAGAACTCTCATTCTaGTACTCTGGTGTCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GAWRRQILFGESQCPTQHRELSF*YSGVCR
Trigger: CCGGCAGACACCAGAGTATCAGAATGAGAGTTCTCG...GTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AGAACAGGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTTGGAGGGAAGGGGGCTaGGTGGTTGTCAGGCGTGGT +
Preference number: 4 (lower is better)
Translates to: RTGLDRSARWIQHQLCHFWREGG*VVVRRG
Trigger: ACCACGCCTGACAACCACTCAGCCCCCTTCCCTCCA...AAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCCTGTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCGTCCTGCTCCAGTTaGAGGGGTGACAACGATTCC +
Preference number: 4 (lower is better)
Translates to: LPQPYSGPQSRTFFSSSQPSCSS*RGDNDS
Trigger: GGAATCGTTGTCACCCCTTCAACTGGAGCAGGACGG...TTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAAAGCCGGCTGAGACGCTaGATGGTTTGGGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: EEANPVWRKPVSNTALGKSRLRR*MVWGEA
Trigger: GGCCTCACCCCAAACCATGCAGCGTCTCAGCCGGCT...TTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GGCGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGCAGGGCAACACATCCAGTGCCATTTaGAGGGCAACCAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: GVGGLFTIVDIQCHLQGNTSSAI*RATRVV
Trigger: CACTACCCTGGTTGCCCTGCAAATGGCACTGGATGT...GTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp GGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACACATCCAGTGCCATTTaGAGGGCAACCAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: GAWRRQILFGESQCPTQHTSSAI*RATRVV
Trigger: CACTACCCTGGTTGCCCTGCAAATGGCACTGGATGT...GTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AATCACCTCTGTGTCTGCAGGACCGCTTGCCAGCTGGCACTCCTGCTGCCAATCATTGTAGACATCCAGTaGCATTTGCAGGGCAACCAG +
Preference number: 4 (lower is better)
Translates to: NHLCVCRTACQLALLLPIIVDIQ*HLQGNQ
Trigger: CTGGTTGCCCTGCAAATGGCACTGGATGTCTACAAT...GATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR GCA 90 bp TGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAGCTGGCACTCCTGCTaGCAATCCTTGGGCACGACG +
Preference number: 4 (lower is better)
Translates to: WRRQILFGESQCPTQHLVSWHSC*QSLGTT
Trigger: CGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCT...TACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACGCCAGCTGGCACTCCTaGTGCCAATCCTTGGGCACG +
Preference number: 4 (lower is better)
Translates to: RRQILFGESQCPTQHLVNASWHS*CQSLGT
Trigger: CGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCTGGC...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAAGTCTGCAGGACCGCTTaGCAGCTGGCACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: EEANPVWRKPVSNTALGKVCRTA*QLALLL
Trigger: CAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGAC...TTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGAACAGGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTGTCTGCAGGACCGCTTaGCAGCTGGCACTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RTGLDRSARWIQHQLCHFVCRTA*QLALLL
Trigger: CAGCAGGAGTGCCAGCTGGCAAGCGGTCCTGCAGAC...AAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCCTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACCAAGCTGGAACCCGCTaGGTGGCACCTGCAAGCAGC +
Preference number: 4 (lower is better)
Translates to: RRQILFGESQCPTQHLVNQAGTR*VAPASS
Trigger: GCTGCTTGCAGGTGCCACCCAGCGGGTTCCAGCTTG...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256997.9
CDS-3UTR CCA 90 bp ACATGGCAGGCGGTGTGGATGCTTCAGGGCACAGGAAAGGAAGCTCAGGCACAACCTGATAGGGGTCCTTaGGATATGTCTTCACTGGTG +
Preference number: 4 (lower is better)
Translates to: TWQAVWMLQGTGKEAQAQPDRGP*DMSSLV
Trigger: CACCAGTGAAGACATATCCCAAGGACCCCTATCAGG...TTGTGCCTGAGCTTCCTTTCCTGTGCCCTGAAGCATCCACACCGCCTGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR CCA 90 bp ATCAGTCCAATAGGAAACAGCACTATTCATTCTCTGGGAGCTGCCCCAGCCCTAAGCGCTGCATCCCGTTaGGAGGGAAGAGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ISPIGNSTIHSLGAAPALSAASR*EGRVQP
Trigger: TGGCTGGACTCTTCCCTCCCAACGGGATGCAGCGCT...TAGGGCTGGGGCAGCTCCCAGAGAATGAATAGTGCTGTTTCCTATTGGACTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CCTGAAGCATTCTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGAGCAGCTTGGGGAGCTaGGAGGTGGTCGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: PEAFCLSLMVALARHREMSSLGS*EVVAIR
Trigger: CCTAATGGCGACCACCTCCCAGCTCCCCAAGCTGCT...CATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAGAATGCTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAAAGTAAACCAGCAGCTTaGGGAGCTGGGAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: LPQPYSGPQSRTFFSSSQSKPAA*GAGRWS
Trigger: CGACCACCTCCCAGCTCCCCAAGCTGCTGGTTTACT...TTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CCTGAAGCATTCTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGAGTGGTTGTCAGGCGTaGTCCTCCCCATCTGCGACG +
Preference number: 4 (lower is better)
Translates to: PEAFCLSLMVALARHREMSGCQA*SSPSAT
Trigger: CGTCGCAGATGGGGAGGACCACGCCTGACAACCACT...CATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAGAATGCTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp TGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAGTGGTTGTCAGGCGTaGTCCTCCCCATCTGCGACG +
Preference number: 4 (lower is better)
Translates to: WRRQILFGESQCPTQHLVSGCQA*SSPSAT
Trigger: CGTCGCAGATGGGGAGGACCACGCCTGACAACCACT...TACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAGGATCTCCTGTCCATaGGCTGGGGAGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: VEEANPVWRKPVSNTALGRISCP*AGEQQQ
Trigger: CTGTTGCTGCTCCCCAGCCCATGGACAGGAGATCCT...ACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AACACTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAAAGGATCTCCTGTCCATaGGCTGGGGAGCAGCAACAG +
Preference number: 4 (lower is better)
Translates to: NTDCQFTSQVCRERGGGKRISCP*AGEQQQ
Trigger: CTGTTGCTGCTCCCCAGCCCATGGACAGGAGATCCT...TTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGATCCAGTTCCTTGGAAATGTGGCTGGCTaGCTGTTGGGTGATCCAGTT +
Preference number: 4 (lower is better)
Translates to: LARHREMWLAGCWVIQFLGNVAG*LLGDPV
Trigger: AACTGGATCACCCAACAGCCAGCCAGCCACATTTCC...AAGGAACTGGATCACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTTCAGGCATATGTCTTCACTGGTaGACGGTCTCCATGGCGGTA +
Preference number: 4 (lower is better)
Translates to: STERQDRVPLSYLPKTSGICLHW*TVSMAV
Trigger: TACCGCCATGGAGACCGTTCACCAGTGAAGACATAT...GCCTGAAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp ATCAGTCCAATAGGAAACAGCACTATTCATTCTCTGGGAGCTGCCCCAGCCCTAACGAGATGTTCGGGTTaGAGCGCTGCATCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: ISPIGNSTIHSLGAAPALTRCSG*SAASRW
Trigger: CCAACGGGATGCAGCGCTTCAACCCGAACATCTCGT...TAGGGCTGGGGCAGCTCCCAGAGAATGAATAGTGCTGTTTCCTATTGGACTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTACGAGATGTTCGGGTTaGAGCGCTGCATCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: GPQSRTFFSSSQPACSSGTRCSG*SAASRW
Trigger: CCAACGGGATGCAGCGCTTCAACCCGAACATCTCGT...ACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CTCACAGAAGAGTGTGTCATAGACATTCCAGACGGTCTCCAGTGTCAGGTCTGTAGTCCTTTAGCCGGCTaGGACGCTGCATGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LTEECVIDIPDGLQCQVCSPLAG*DAAWFG
Trigger: CCCAAACCATGCAGCGTCTCAGCCGGCTAAAGGACT...ACAGACCTGACACTGGAGACCGTCTGGAATGTCTATGACACACTCTTCTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR TCA 90 bp GAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATGCACGACGGGCTCTGTaGGGCGAAGGAAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: EANPVWRKPVSNTALGKHARRAL*GEGSPA
Trigger: TGCAGGACTTCCTTCGCCTCACAGAGCCCGTCGTGC...ATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AGAACAGGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTCATGGGAATGCTGAGTaGCAGGCACCATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: RTGLDRSARWIQHQLCHFHGNAE*QAPWAT
Trigger: CGTGGCCCATGGTGCCTGTCACTCAGCATTCCCATG...AAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCCTGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GATCCAGTTCCTTGGGAGCCAATGTTTGTACCCCTGGTATTAGCTGTTTTTCCCCATGGGAATGCTGAGTaGCAGGCACCATGGGCCACG +
Preference number: 4 (lower is better)
Translates to: DPVPWEPMFVPLVLAVFPHGNAE*QAPWAT
Trigger: CGTGGCCCATGGTGCCTGTCACTCAGCATTCCCATG...GGGAAAAACAGCTAATACCAGGGGTACAAACATTGGCTCCCAAGGAACTGGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CCCTCCCAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGGTCCTGAGTGAACACTaGCTGCCAGTTTACATCTCA +
Preference number: 4 (lower is better)
Translates to: PSQVQTTFRPAPVEGVTTVLSEH*LPVYIS
Trigger: TGAGATGTAAACTGGCAGTCAGTGTTCACTCAGGAC...CGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCAAAGACCGTGTCCCTCTaGGCTATTTGCCGAAGACTT +
Preference number: 4 (lower is better)
Translates to: GSVEEANPVWRKPVSNTAKTVSL*AICRRL
Trigger: AAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTT...TGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CAGTCCAATAGGAAACAGCACTATTCATTCTCTGGGAGCTGCCCCAGCCCTATTCCGTCCTGCTCCAGTTaGAGGGGTGACAACGATTCC +
Preference number: 4 (lower is better)
Translates to: QSNRKQHYSFSGSCPSPIPSCSS*RGDNDS
Trigger: GGAATCGTTGTCACCCCTTCAACTGGAGCAGGACGG...AATAGGGCTGGGGCAGCTCCCAGAGAATGAATAGTGCTGTTTCCTATTGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGCAGGGCAACCAACATCCAGTGCCATTTaGAGGGCAACCAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: RRGLVHHCRHPVPFAGQPTSSAI*RATRVV
Trigger: CACTACCCTGGTTGCCCTGCAAATGGCACTGGATGT...TGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp GGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTCTAATCAGCTGGCACTCCTGCTaGCAATCCTTGGGCACGACG +
Preference number: 4 (lower is better)
Translates to: GLDRSARWIQHQLCHFLISWHSC*QSLGTT
Trigger: CGTCGTGCCCAAGGATTGGCAGCAGGAGTGCCAGCT...GATTAGAAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp TTGTCACTCTCGTTCCGAAAGTACATCTCCACTGAGAAATTCCCAGAATCTTCCGTGGTCCTCCCCATCTaGGACGTGGCGGTAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LSLSFRKYISTEKFPESSVVLPI*DVAVAR
Trigger: CCTGGCTACCGCCACGTCGCAGATGGGGAGGACCAC...GGAAGATTCTGGGAATTTCTCAGTGGAGATGTACTTTCGGAACGAGAGTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR GCA 90 bp GGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTCTCATTCTCTGGGAGCTaGCCCAGCCCTATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GHSLELSFPAHNLHVAQVSFSGS*PSPILG
Trigger: GCCCAGAATAGGGCTGGGGCAGCTCCCAGAGAATGA...GACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGCCTGATAGGGGTCCTTaGGATATGTCTTCACTGGTG +
Preference number: 4 (lower is better)
Translates to: ESNGGSSQTQGNVAGWLLPDRGP*DMSSLV
Trigger: CACCAGTGAAGACATATCCCAAGGACCCCTATCAGG...CAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp TCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTCCTGATAGGGGTCCTTaGGATATGTCTTCACTGGTG +
Preference number: 4 (lower is better)
Translates to: SNGGSSQTQGNVAGWLLGPDRGP*DMSSLV
Trigger: CACCAGTGAAGACATATCCCAAGGACCCCTATCAGG...ACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACTCATAACGGGGACATaGGCCCAACGGGAACTTCAG +
Preference number: 4 (lower is better)
Translates to: LPQPYSGPQSRTFFSSSQLITGT*AQRELQ
Trigger: CTGAAGTTCCCGTTGGGCCCATGTCCCCGTTATGAG...TTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACAGCAGCTTGGGGAGCTaGGAGGTGGTCGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: RRQILFGESQCPTQHLVNSSLGS*EVVAIR
Trigger: CCTAATGGCGACCACCTCCCAGCTCCCCAAGCTGCT...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTCTAATCCTCCTGTCCATGGGCTaGGGAGCAGCAACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: GLDRSARWIQHQLCHFLILLSMG*GAATVR
Trigger: CCTGACTGTTGCTGCTCCCCAGCCCATGGACAGGAG...GATTAGAAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GAAATTCCCAGAATCTTCCTGGTACAGTTCAAATATGTGGCAGGAGGCGTAGGGCTCCTGTCCATGGGCTaGGGAGCAGCAACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: EIPRIFLVQFKYVAGGVGLLSMG*GAATVR
Trigger: CCTGACTGTTGCTGCTCCCCAGCCCATGGACAGGAG...CCCTACGCCTCCTGCCACATATTTGAACTGTACCAGGAAGATTCTGGGAATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR CCA 90 bp CCCTCCCAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGGAGGCAAATCCTGTTTaGAGAAAGCCAGTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: PSQVQTTFRPAPVEGVTTEANPV*RKPVSN
Trigger: GTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC...CGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGGGTGATCCAGTTCCTTaGGAGCCAATGTTTGTACCC +
Preference number: 4 (lower is better)
Translates to: LSESNGGSSQTQGNVAGWGDPVP*EPMFVP
Trigger: GGGTACAAACATTGGCTCCCAAGGAACTGGATCACC...CCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTTCAGGCGGTGATCCAGTTCCTTaGGAGCCAATGTTTGTACCC +
Preference number: 4 (lower is better)
Translates to: STERQDRVPLSYLPKTSGGDPVP*EPMFVP
Trigger: GGGTACAAACATTGGCTCCCAAGGAACTGGATCACC...GCCTGAAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp ACAGGAAAGGAAGCTCAGGCACAAAAAGTGAGACTCAGCAGAAAGGAGCTCTGGGAAAGGAGCTCTGGGTaGAGAGCAGCAGGGACTGCT +
Preference number: 4 (lower is better)
Translates to: TGKEAQAQKVRLSRKELWERSSG*RAAGTA
Trigger: AGCAGTCCCTGCTGCTCTCCACCCAGAGCTCCTTTC...CCAGAGCTCCTTTCTGCTGAGTCTCACTTTTTGTGCCTGAGCTTCCTTTCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672787.1
3UTR CAA 72 bp AGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTaGCCGAAGACTTCAGGCTGGAGGAAAAAGAACAGG +
Preference number: 4 (lower is better)
Translates to: STERQDRVPLSY*PKTSGWRKKNR
Trigger: CCTGTTCTTTTTCCTCCAGCCTGAAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR CAA 72 bp TCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTaGGGTGATCCAGTTCCTTGGGAGCCAATGTTTGTA +
Preference number: 4 (lower is better)
Translates to: SSQTQGNVAGWL*GDPVPWEPMFV
Trigger: TACAAACATTGGCTCCCAAGGAACTGGATCACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACCCTCCTTGGTTAACTaGCCAAACCCCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: EEANPVWRKPVSNTALGKPSLVN*PNPWGH
Trigger: ATGGCCCCAGGGGTTTGGTCAGTTAACCAAGGAGGG...TTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGTCCTGAGTGAACACTaGCTGCCAGTTTACATCTCA +
Preference number: 4 (lower is better)
Translates to: ESNGGSSQTQGNVAGWLLVLSEH*LPVYIS
Trigger: TGAGATGTAAACTGGCAGTCAGTGTTCACTCAGGAC...CAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTCCTGAGTGAACACTaGCTGCCAGTTTACATCTCA +
Preference number: 4 (lower is better)
Translates to: SLMVALARHREMWLAGCWVLSEH*LPVYIS
Trigger: TGAGATGTAAACTGGCAGTCAGTGTTCACTCAGGAC...CCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGATCCAGTTCCTTATCCTAGGTCCTGAGTaGACACTGACTGCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: LARHREMWLAGCWVIQFLILGPE*TLTASL
Trigger: TAAACTGGCAGTCAGTGTTCACTCAGGACCTAGGAT...AAGGAACTGGATCACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGGTGACAACGATTCCTaGAGCATTCTGTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: SLMVALARHREMWLAGCWGDNDS*SILSES
Trigger: AGACTCAGACAGAATGCTTCAGGAATCGTTGTCACC...CCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GATCCAGTTCCTTGGGAGCCAATGTTTGTACCCCTGGTATTAGCTGTTTTTCCCGACACACGCCGGAAGTaGGTTCGCCGCCATCTTACT +
Preference number: 4 (lower is better)
Translates to: DPVPWEPMFVPLVLAVFPDTRRK*VRRHLT
Trigger: AGTAAGATGGCGGCGAACGCACTTCCGGCGTGTGTC...GGGAAAAACAGCTAATACCAGGGGTACAAACATTGGCTCCCAAGGAACTGGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000256997.9
CDS-3UTR GCA 90 bp ACATGGCAGGCGGTGTGGATGCTTCAGGGCACAGGAAAGGAAGCTCAGGCACAATCCGGTCAAAGTCTGTaGTTCGCACATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: TWQAVWMLQGTGKEAQAQSGQSL*FAHKPL
Trigger: AAGAGGTTTATGTGCGAAGCACAGACTTTGACCGGA...TTGTGCCTGAGCTTCCTTTCCTGTGCCCTGAAGCATCCACACCGCCTGCCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR GCA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACTTCGGGTTGAAGCGCTaGATCCCGTTGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RRQILFGESQCPTQHLVNFGLKR*IPLGGK
Trigger: CTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAA...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AACACTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAATGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: NTDCQFTSQVCRERGGGKCTGIG*HEMFGL
Trigger: CAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCA...TTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATCGGCAGGCGCAGCCCGTaGGTTTGCTCACAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RQILFGESQCPTQHLVNIGRRSP*VCSQKS
Trigger: ACTCTTCTGTGAGCAAACGCACGGGCTGCGCCTGCC...GATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATGGCAGGCGCAGCCCGTaGGTTTGCTCACAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: EANPVWRKPVSNTALGKHGRRSP*VCSQKS
Trigger: ACTCTTCTGTGAGCAAACGCACGGGCTGCGCCTGCC...ATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GTATTAGCTGTTTTTCCCACTAAAATAAGCACTGAGAGGCAAGACCGTGTCCCTAGCCGGCTGAGACGCTaGATGGTTTGGGGTGAGGCC +
Preference number: 4 (lower is better)
Translates to: VLAVFPTKISTERQDRVPSRLRR*MVWGEA
Trigger: GGCCTCACCCCAAACCATGCAGCGTCTCAGCCGGCT...AGGGACACGGTCTTGCCTCTCAGTGCTTATTTTAGTGGGAAAAACAGCTAATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGATTGTAGACATCCAGTaGCATTTGCAGGGCAACCAG +
Preference number: 4 (lower is better)
Translates to: LSESNGGSSQTQGNVAGWIVDIQ*HLQGNQ
Trigger: CTGGTTGCCCTGCAAATGGCACTGGATGTCTACAAT...CCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp ATCAGTCCAATAGGAAACAGCACTATTCATTCTCTGGGAGCTGCCCCAGCCCTAAATCACCTCTGTGTCTaGAGGACCGCTTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ISPIGNSTIHSLGAAPALNHLCV*RTACQL
Trigger: CAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATT...TAGGGCTGGGGCAGCTCCCAGAGAATGAATAGTGCTGTTTCCTATTGGACTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATCAGCGCTGCATCCCGTTaGGAGGGAAGAGTCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RQILFGESQCPTQHLVNISAASR*EGRVQP
Trigger: TGGCTGGACTCTTCCCTCCCAACGGGATGCAGCGCT...GATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATTGGGGAGCTGGGAGGTaGTCGCCATTAGGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: EANPVWRKPVSNTALGKHWGAGR*SPLGSG
Trigger: ACCTGACCCTAATGGCGACCACCTCCCAGCTCCCCA...ATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATAGCAGCTTGGGGAGCTaGGAGGTGGTCGCCATTAGG +
Preference number: 4 (lower is better)
Translates to: EANPVWRKPVSNTALGKHSSLGS*EVVAIR
Trigger: CCTAATGGCGACCACCTCCCAGCTCCCCAAGCTGCT...ATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACAGTAAACCAGCAGCTTaGGGAGCTGGGAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: RRQILFGESQCPTQHLVNSKPAA*GAGRWS
Trigger: CGACCACCTCCCAGCTCCCCAAGCTGCTGGTTTACT...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GTATTAGCTGTTTTTCCCACTAAAATAAGCACTGAGAGGCAAGACCGTGTCCCTGGACCGCTTGCCAGCTaGCACTCCTGCTGCCAATCC +
Preference number: 4 (lower is better)
Translates to: VLAVFPTKISTERQDRVPGPLAS*HSCCQS
Trigger: GGATTGGCAGCAGGAGTGCCAGCTGGCAAGCGGTCC...AGGGACACGGTCTTGCCTCTCAGTGCTTATTTTAGTGGGAAAAACAGCTAATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATCACTCGCTCATCTGGCTaGGGTCATCAGAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RQILFGESQCPTQHLVNITRSSG*GHQREA
Trigger: GGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGT...GATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp CCTGAAGCATTCTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGAGACACAGGGAAATGTaGCTGGCTGGCTGTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PEAFCLSLMVALARHREMRHREM*LAGCWV
Trigger: CACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCT...CATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAGAATGCTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AGAAATTCCCAGAATCTTCCTGGTACAGTTCAAATATGTGGCAGGAGGCGTAGGACGAGATGTTCGGGTTaGAGCGCTGCATCCCGTTGG +
Preference number: 4 (lower is better)
Translates to: RNSQNLPGTVQICGRRRRTRCSG*SAASRW
Trigger: CCAACGGGATGCAGCGCTTCAACCCGAACATCTCGT...CCTACGCCTCCTGCCACATATTTGAACTGTACCAGGAAGATTCTGGGAATTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR TCA 90 bp AACACTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAATCTAATCCTAGGTCCTaGGTGAACACTGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: NTDCQFTSQVCRERGGGKSNPRS*VNTDCQ
Trigger: CTGGCAGTCAGTGTTCACTCAGGACCTAGGATTAGA...TTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp ACTCTGAGGATCTCTGTCACCCATGAGGGAAGTTCCCGTGTTTCACAAGCACAGAACCATTTCCCACTCTaGGGATCTCTGTCACCCATG +
Preference number: 4 (lower is better)
Translates to: TLRISVTHEGSSRVSQAQNHFPL*GSLSPM
Trigger: CATGGGTGACAGAGATCCTCAGAGTGGGAAATGGTT...CTGTGCTTGTGAAACACGGGAACTTCCCTCATGGGTGACAGAGATCCTCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR GCA 90 bp TCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTCACCGTTGTAATCTATaGAGCAAACAAGCTGGAACC +
Preference number: 4 (lower is better)
Translates to: SNGGSSQTQGNVAGWLLGHRCNL*SKQAGT
Trigger: GGTTCCAGCTTGTTTGCTGCATAGATTACAACGGTG...ACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256997.9
CDS-3UTR GCA 90 bp GGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCATCCGGTCAAAGTCTGTaGTTCGCACATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: GSVEEANPVWRKPVSNTASGQSL*FAHKPL
Trigger: AAGAGGTTTATGTGCGAAGCACAGACTTTGACCGGA...TGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGATCCAGTTCCTTTCCGGTCAAAGTCTGTaGTTCGCACATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: LARHREMWLAGCWVIQFLSGQSL*FAHKPL
Trigger: AAGAGGTTTATGTGCGAAGCACAGACTTTGACCGGA...AAGGAACTGGATCACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTCCGGTCAAAGTCTGTaGTTCGCACATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: LSLMVALARHREMWLAGCSGQSL*FAHKPL
Trigger: AAGAGGTTTATGTGCGAAGCACAGACTTTGACCGGA...ACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATCTTCGGGTTGAAGCGCTaGATCCCGTTGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RQILFGESQCPTQHLVNIFGLKR*IPLGGK
Trigger: CTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAA...GATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp TGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTATGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: WRRQILFGESQCPTQHLVCTGIG*HEMFGL
Trigger: CAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCA...TACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACAATCACCTCTGTGTCTaGAGGACCGCTTGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: RRQILFGESQCPTQHLVNNHLCV*RTACQL
Trigger: CAGCTGGCAAGCGGTCCTGCAGACACAGAGGTGATT...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AAAATAAGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTGGTGAACGGTCTCCATaGCGGTACAGCAAGGTAACG +
Preference number: 4 (lower is better)
Translates to: KISTERQDRVPLSYLPKTGERSP*RYSKVT
Trigger: CGTTACCTTGCTGTACCGCCATGGAGACCGTTCACC...AGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCTTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AACACTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAACTCATTCTGATACTCTaGTGTCTGCCGGGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: NTDCQFTSQVCRERGGGKLILIL*CLPGLV
Trigger: AACGAGACCCGGCAGACACCAGAGTATCAGAATGAG...TTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AACACTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAAGATAGAAGTGCAAGGTaGATCCAGCACCAACTCTGC +
Preference number: 4 (lower is better)
Translates to: NTDCQFTSQVCRERGGGKDRSAR*IQHQLC
Trigger: GCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATC...TTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp TGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAATATGTCTTCACTGGTaGACGGTCTCCATGGCGGTA +
Preference number: 4 (lower is better)
Translates to: WRRQILFGESQCPTQHLVICLHW*TVSMAV
Trigger: TACCGCCATGGAGACCGTTCACCAGTGAAGACATAT...TACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CTCACAGAAGAGTGTGTCATAGACATTCCAGACGGTCTCCAGTGTCAGGTCTGTATATGTCTTCACTGGTaGACGGTCTCCATGGCGGTA +
Preference number: 4 (lower is better)
Translates to: LTEECVIDIPDGLQCQVCICLHW*TVSMAV
Trigger: TACCGCCATGGAGACCGTTCACCAGTGAAGACATAT...ACAGACCTGACACTGGAGACCGTCTGGAATGTCTATGACACACTCTTCTGTGAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR TCA 90 bp TTGTCACTCTCGTTCCGAAAGTACATCTCCACTGAGAAATTCCCAGAATCTTCCCCCTCCTTGGTTAACTaGCCAAACCCCTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LSLSFRKYISTEKFPESSPSLVN*PNPWGH
Trigger: ATGGCCCCAGGGGTTTGGTCAGTTAACCAAGGAGGG...GGAAGATTCTGGGAATTTCTCAGTGGAGATGTACTTTCGGAACGAGAGTGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR TCA 90 bp GGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTTCTAATCCTAGGTCCTaGGTGAACACTGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: GPQSRTFFSSSQPACSSGSNPRS*VNTDCQ
Trigger: CTGGCAGTCAGTGTTCACTCAGGACCTAGGATTAGA...ACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAAGGTGACAACGATTCCTaGAGCATTCTGTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: LPQPYSGPQSRTFFSSSQGDNDS*SILSES
Trigger: AGACTCAGACAGAATGCTTCAGGAATCGTTGTCACC...TTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGATTCCTGGTGACAACGATTCCTaGAGCATTCTGTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: QVQTTFRPAPVEGVTTIPGDNDS*SILSES
Trigger: AGACTCAGACAGAATGCTTCAGGAATCGTTGTCACC...AGGAATCGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp CAGTCCAATAGGAAACAGCACTATTCATTCTCTGGGAGCTGCCCCAGCCCTATTCTCCAGTTGAAGGGGTaGCAACGATTCCTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: QSNRKQHYSFSGSCPSPILQLKG*QRFLKH
Trigger: ATGCTTCAGGAATCGTTGTCACCCCTTCAACTGGAG...AATAGGGCTGGGGCAGCTCCCAGAGAATGAATAGTGCTGTTTCCTATTGGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GTATTAGCTGTTTTTCCCACTAAAATAAGCACTGAGAGGCAAGACCGTGTCCCTCCGTCCTGCTCCAGTTaGAGGGGTGACAACGATTCC +
Preference number: 4 (lower is better)
Translates to: VLAVFPTKISTERQDRVPPSCSS*RGDNDS
Trigger: GGAATCGTTGTCACCCCTTCAACTGGAGCAGGACGG...AGGGACACGGTCTTGCCTCTCAGTGCTTATTTTAGTGGGAAAAACAGCTAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAATCCTTCCGGTCAAAGTCTGTaGTTCGCACATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: LTASLHLRCVGSVEEANPSGQSL*FAHKPL
Trigger: AAGAGGTTTATGTGCGAAGCACAGACTTTGACCGGA...AGGATTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGCAGGGCAACCATCCGGTCAAAGTCTGTaGTTCGCACATAAACCTCTT +
Preference number: 4 (lower is better)
Translates to: RRGLVHHCRHPVPFAGQPSGQSL*FAHKPL
Trigger: AAGAGGTTTATGTGCGAAGCACAGACTTTGACCGGA...TGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp GTATTAGCTGTTTTTCCCACTAAAATAAGCACTGAGAGGCAAGACCGTGTCCCTTTCGGGTTGAAGCGCTaGATCCCGTTGGGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VLAVFPTKISTERQDRVPFGLKR*IPLGGK
Trigger: CTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAA...AGGGACACGGTCTTGCCTCTCAGTGCTTATTTTAGTGGGAAAAACAGCTAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACTGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: RRQILFGESQCPTQHLVNCTGIG*HEMFGL
Trigger: CAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCA...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAAACATCCAGTGCCATTTaGAGGGCAACCAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: EEANPVWRKPVSNTALGKTSSAI*RATRVV
Trigger: CACTACCCTGGTTGCCCTGCAAATGGCACTGGATGT...TTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp GGGAGCTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTATCCAGCACCAACTCTaGCATTTTCTAATCCTAGGT +
Preference number: 4 (lower is better)
Translates to: GSCPSPILGHSLELSFPAIQHQL*HFLILG
Trigger: ACCTAGGATTAGAAAATGGCAGAGTTGGTGCTGGAT...AGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAGCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp TGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTACTCATTCTGATACTCTaGTGTCTGCCGGGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: WRRQILFGESQCPTQHLVLILIL*CLPGLV
Trigger: AACGAGACCCGGCAGACACCAGAGTATCAGAATGAG...TACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTCTCATTCTGATACTCTaGTGTCTGCCGGGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: GPQSRTFFSSSQPACSSGLILIL*CLPGLV
Trigger: AACGAGACCCGGCAGACACCAGAGTATCAGAATGAG...ACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GTATTAGCTGTTTTTCCCACTAAAATAAGCACTGAGAGGCAAGACCGTGTCCCTAGTAAACCAGCAGCTTaGGGAGCTGGGAGGTGGTCG +
Preference number: 4 (lower is better)
Translates to: VLAVFPTKISTERQDRVPSKPAA*GAGRWS
Trigger: CGACCACCTCCCAGCTCCCCAAGCTGCTGGTTTACT...AGGGACACGGTCTTGCCTCTCAGTGCTTATTTTAGTGGGAAAAACAGCTAATAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp TGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAGATAGAAGTGCAAGGTaGATCCAGCACCAACTCTGC +
Preference number: 4 (lower is better)
Translates to: WRRQILFGESQCPTQHLVDRSAR*IQHQLC
Trigger: GCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATC...TACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp TGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAGGTGATCCAGTTCCTTaGGAGCCAATGTTTGTACCC +
Preference number: 4 (lower is better)
Translates to: WRRQILFGESQCPTQHLVGDPVP*EPMFVP
Trigger: GGGTACAAACATTGGCTCCCAAGGAACTGGATCACC...TACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GATCCAGTTCCTTGGGAGCCAATGTTTGTACCCCTGGTATTAGCTGTTTTTCCCGGAAATGTGGCTGGCTaGCTGTTGGGTGATCCAGTT +
Preference number: 4 (lower is better)
Translates to: DPVPWEPMFVPLVLAVFPGNVAG*LLGDPV
Trigger: AACTGGATCACCCAACAGCCAGCCAGCCACATTTCC...GGGAAAAACAGCTAATACCAGGGGTACAAACATTGGCTCCCAAGGAACTGGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
3UTR CAA 72 bp GTACAGTTCAAATATGTGGCAGGAGGCGTAGGGGGCTaGTTCACCATTGTAGACATCCAGTGCCATTTGCAG +
Preference number: 4 (lower is better)
Translates to: VQFKYVAGGVGG*FTIVDIQCHLQ
Trigger: CTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCCACATATTTGAACTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
3UTR CAA 72 bp ACGGTCTCCAGTGTCAGGTCTGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAATTGCTATGAAAAATGG +
Preference number: 4 (lower is better)
Translates to: TVSSVRSVSPVS*ATMSRNCYEKW
Trigger: CCATTTTTCATAGCAATTTCTGGACATGGTGGCCAACGAGACAGGGCTTACAGACCTGACACTGGAGACCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR TCA 90 bp CTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGATCCAGTTCCTTAAAGTACATCTCCACTaGGAAATTCCCAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: LARHREMWLAGCWVIQFLKVHLH*EIPRIF
Trigger: GAAGATTCTGGGAATTTCTCAGTGGAGATGTACTTT...AAGGAACTGGATCACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCAAAAGTACATCTCCACTaGGAAATTCCCAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: GSVEEANPVWRKPVSNTAKVHLH*EIPRIF
Trigger: GAAGATTCTGGGAATTTCTCAGTGGAGATGTACTTT...TGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AAAATAAGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTTCTAATCCTAGGTCCTaGGTGAACACTGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: KISTERQDRVPLSYLPKTSNPRS*VNTDCQ
Trigger: CTGGCAGTCAGTGTTCACTCAGGACCTAGGATTAGA...AGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AGAACAGGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTAAGACCGTGTCCCTCTaGGCTATTTGCCGAAGACTT +
Preference number: 4 (lower is better)
Translates to: RTGLDRSARWIQHQLCHFKTVSL*AICRRL
Trigger: AAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTT...AAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCCTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AAAATAAGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTAAGACCGTGTCCCTCTaGGCTATTTGCCGAAGACTT +
Preference number: 4 (lower is better)
Translates to: KISTERQDRVPLSYLPKTKTVSL*AICRRL
Trigger: AAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTT...AGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTCTAATCAAGACCGTGTCCCTCTaGGCTATTTGCCGAAGACTT +
Preference number: 4 (lower is better)
Translates to: GLDRSARWIQHQLCHFLIKTVSL*AICRRL
Trigger: AAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTT...GATTAGAAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GATCCAGTTCCTTGGGAGCCAATGTTTGTACCCCTGGTATTAGCTGTTTTTCCCCTCCAGTTGAAGGGGTaGCAACGATTCCTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: DPVPWEPMFVPLVLAVFPLQLKG*QRFLKH
Trigger: ATGCTTCAGGAATCGTTGTCACCCCTTCAACTGGAG...GGGAAAAACAGCTAATACCAGGGGTACAAACATTGGCTCCCAAGGAACTGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACTCCAGTTGAAGGGGTaGCAACGATTCCTGAAGCAT +
Preference number: 4 (lower is better)
Translates to: EEANPVWRKPVSNTALGKLQLKG*QRFLKH
Trigger: ATGCTTCAGGAATCGTTGTCACCCCTTCAACTGGAG...TTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATCTGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: RQILFGESQCPTQHLVNICTGIG*HEMFGL
Trigger: CAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCA...GATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTCTAATCCCTGATAGGGGTCCTTaGGATATGTCTTCACTGGTG +
Preference number: 4 (lower is better)
Translates to: GLDRSARWIQHQLCHFLIPDRGP*DMSSLV
Trigger: CACCAGTGAAGACATATCCCAAGGACCCCTATCAGG...GATTAGAAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GAAATTCCCAGAATCTTCCTGGTACAGTTCAAATATGTGGCAGGAGGCGTAGGGCCTGATAGGGGTCCTTaGGATATGTCTTCACTGGTG +
Preference number: 4 (lower is better)
Translates to: EIPRIFLVQFKYVAGGVGPDRGP*DMSSLV
Trigger: CACCAGTGAAGACATATCCCAAGGACCCCTATCAGG...CCCTACGCCTCCTGCCACATATTTGAACTGTACCAGGAAGATTCTGGGAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp AAAATAAGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTCTCATTCTGATACTCTaGTGTCTGCCGGGTCTCGTT +
Preference number: 4 (lower is better)
Translates to: KISTERQDRVPLSYLPKTLILIL*CLPGLV
Trigger: AACGAGACCCGGCAGACACCAGAGTATCAGAATGAG...AGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCTTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCTTCCCAGAATCTTCCTaGTACAGTTCAAATATGTGG +
Preference number: 4 (lower is better)
Translates to: RERGGGKSCLEKASVQHSFPESS*YSSNMW
Trigger: CCACATATTTGAACTGTACCAGGAAGATTCTGGGAA...GCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTCCCAGAATCTTCCTaGTACAGTTCAAATATGTGG +
Preference number: 4 (lower is better)
Translates to: GAWRRQILFGESQCPTQHFPESS*YSSNMW
Trigger: CCACATATTTGAACTGTACCAGGAAGATTCTGGGAA...GTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GCGCAGCCCGTGCGTTTGCTCACAGAAGAGTGTGTCATAGACATTCCAGACGGTTTCCCAGAATCTTCCTaGTACAGTTCAAATATGTGG +
Preference number: 4 (lower is better)
Translates to: AQPVRLLTEECVIDIPDGFPESS*YSSNMW
Trigger: CCACATATTTGAACTGTACCAGGAAGATTCTGGGAA...ACCGTCTGGAATGTCTATGACACACTCTTCTGTGAGCAAACGCACGGGCTGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp GAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAAGATAGAAGTGCAAGGTaGATCCAGCACCAACTCTGC +
Preference number: 4 (lower is better)
Translates to: EEANPVWRKPVSNTALGKDRSAR*IQHQLC
Trigger: GCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATC...TTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACGGTGATCCAGTTCCTTaGGAGCCAATGTTTGTACCC +
Preference number: 4 (lower is better)
Translates to: RRQILFGESQCPTQHLVNGDPVP*EPMFVP
Trigger: GGGTACAAACATTGGCTCCCAAGGAACTGGATCACC...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATTCTAATCCTAGGTCCTaGGTGAACACTGACTGCCAG +
Preference number: 4 (lower is better)
Translates to: EANPVWRKPVSNTALGKHSNPRS*VNTDCQ
Trigger: CTGGCAGTCAGTGTTCACTCAGGACCTAGGATTAGA...ATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp ACTCTGAGGATCTCTGTCACCCATGAGGGAAGTTCCCGTGTTTCACAAGCACAGAGCAGCAGGGACTGCTaGCAATTAATAAACCATTTC +
Preference number: 4 (lower is better)
Translates to: TLRISVTHEGSSRVSQAQSSRDC*QLINHF
Trigger: GAAATGGTTTATTAATTGTCAGCAGTCCCTGCTGCT...CTGTGCTTGTGAAACACGGGAACTTCCCTCATGGGTGACAGAGATCCTCAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR GCA 90 bp ATTAATAAACCATTTCCCACTCTGAGGATCTCTGTCACCCATGAGGGAAGTTCCTGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTG +
Preference number: 4 (lower is better)
Translates to: INKPFPTLRISVTHEGSSCTGIG*HEMFGL
Trigger: CAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCA...GGAACTTCCCTCATGGGTGACAGAGATCCTCAGAGTGGGAAATGGTTTATTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR GCA 90 bp GTATTAGCTGTTTTTCCCACTAAAATAAGCACTGAGAGGCAAGACCGTGTCCCTACATCCAGTGCCATTTaGAGGGCAACCAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: VLAVFPTKISTERQDRVPTSSAI*RATRVV
Trigger: CACTACCCTGGTTGCCCTGCAAATGGCACTGGATGT...AGGGACACGGTCTTGCCTCTCAGTGCTTATTTTAGTGGGAAAAACAGCTAATAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AAAATAAGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTATTGTAGACATCCAGTaGCATTTGCAGGGCAACCAG +
Preference number: 4 (lower is better)
Translates to: KISTERQDRVPLSYLPKTIVDIQ*HLQGNQ
Trigger: CTGGTTGCCCTGCAAATGGCACTGGATGTCTACAAT...AGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCTTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp AGAACAGGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTATTGTAGACATCCAGTaGCATTTGCAGGGCAACCAG +
Preference number: 4 (lower is better)
Translates to: RTGLDRSARWIQHQLCHFIVDIQ*HLQGNQ
Trigger: CTGGTTGCCCTGCAAATGGCACTGGATGTCTACAAT...AAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCCTGTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp ACAGTTCAAATATGTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATATTGTAGACATCCAGTaGCATTTGCAGGGCAACCAG +
Preference number: 4 (lower is better)
Translates to: TVQICGRRRRGLVHHCRHIVDIQ*HLQGNQ
Trigger: CTGGTTGCCCTGCAAATGGCACTGGATGTCTACAAT...ATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCCACATATTTGAACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp GTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTATCCAGCACCAACTCTaGCATTTTCTAATCCTAGGT +
Preference number: 4 (lower is better)
Translates to: VEEANPVWRKPVSNTALGIQHQL*HFLILG
Trigger: ACCTAGGATTAGAAAATGGCAGAGTTGGTGCTGGAT...ACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTCTAATCGAGGCAAATCCTGTTTaGAGAAAGCCAGTGTCCAAC +
Preference number: 4 (lower is better)
Translates to: GLDRSARWIQHQLCHFLIEANPV*RKPVSN
Trigger: GTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC...GATTAGAAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp AGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATCATCCTAGGTCCTGAGTaGACACTGACTGCCAGTTTA +
Preference number: 4 (lower is better)
Translates to: RQILFGESQCPTQHLVNIILGPE*TLTASL
Trigger: TAAACTGGCAGTCAGTGTTCACTCAGGACCTAGGAT...GATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp GAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATGGTGACAACGATTCCTaGAGCATTCTGTCTGAGTCT +
Preference number: 4 (lower is better)
Translates to: EANPVWRKPVSNTALGKHGDNDS*SILSES
Trigger: AGACTCAGACAGAATGCTTCAGGAATCGTTGTCACC...ATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR GCA 90 bp CCCGTGCGTTTGCTCACAGAAGAGTGTGTCATAGACATTCCAGACGGTCTCCAGACCATGTCCAGAAATTaGTATGAAAAATGGATCAGG +
Preference number: 4 (lower is better)
Translates to: PVRLLTEECVIDIPDGLQTMSRN*YEKWIR
Trigger: CCTGATCCATTTTTCATAGCAATTTCTGGACATGGT...CTGGAGACCGTCTGGAATGTCTATGACACACTCTTCTGTGAGCAAACGCACGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR TCA 90 bp TTGTTCACCATTGTAGACATCCAGTGCCATTTGCAGGGCAACCAGGGTAGTGTCAAAGTACATCTCCACTaGGAAATTCCCAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: LFTIVDIQCHLQGNQGSVKVHLH*EIPRIF
Trigger: GAAGATTCTGGGAATTTCTCAGTGGAGATGTACTTT...GACACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATCCAGCACCAACTCTaGCATTTTCTAATCCTAGGT +
Preference number: 4 (lower is better)
Translates to: RRQILFGESQCPTQHLVNIQHQL*HFLILG
Trigger: ACCTAGGATTAGAAAATGGCAGAGTTGGTGCTGGAT...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp GGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTCTTCCCAGAATCTTCCTaGTACAGTTCAAATATGTGG +
Preference number: 4 (lower is better)
Translates to: GHSLELSFPAHNLHVAQVFPESS*YSSNMW
Trigger: CCACATATTTGAACTGTACCAGGAAGATTCTGGGAA...GACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp AGCATTCTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTTTCCCAGAATCTTCCTaGTACAGTTCAAATATGTGG +
Preference number: 4 (lower is better)
Translates to: SILSESNGGSSQTQGNVAFPESS*YSSNMW
Trigger: CCACATATTTGAACTGTACCAGGAAGATTCTGGGAA...AGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAGAATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CCA 90 bp TTCAAATATGTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTTCCCAGAATCTTCCTaGTACAGTTCAAATATGTGG +
Preference number: 4 (lower is better)
Translates to: FKYVAGGVGGLFTIVDIQFPESS*YSSNMW
Trigger: CCACATATTTGAACTGTACCAGGAAGATTCTGGGAA...CTGGATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCCACATATTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp CTGGTACAGTTCAAATATGTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAAATTGCTATGAAAAATaGATCAGGGTCTCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: LVQFKYVAGGVGGLFTIVNCYEK*IRVSVL
Trigger: CAGGACTGAGACCCTGATCCATTTTTCATAGCAATT...TACAATGGTGAACAAGCCCCCTACGCCTCCTGCCACATATTTGAACTGTACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673511.1
CDS-3UTR TCA 90 bp GATCCAGTTCCTTGGGAGCCAATGTTTGTACCCCTGGTATTAGCTGTTTTTCCCAAAGTACATCTCCACTaGGAAATTCCCAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: DPVPWEPMFVPLVLAVFPKVHLH*EIPRIF
Trigger: GAAGATTCTGGGAATTTCTCAGTGGAGATGTACTTT...GGGAAAAACAGCTAATACCAGGGGTACAAACATTGGCTCCCAAGGAACTGGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR TCA 90 bp ACAGTTCAAATATGTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATAAAGTACATCTCCACTaGGAAATTCCCAGAATCTTC +
Preference number: 4 (lower is better)
Translates to: TVQICGRRRRGLVHHCRHKVHLH*EIPRIF
Trigger: GAAGATTCTGGGAATTTCTCAGTGGAGATGTACTTT...ATGTCTACAATGGTGAACAAGCCCCCTACGCCTCCTGCCACATATTTGAACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR GCA 90 bp CTGGTACAGTTCAAATATGTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAACCATGTCCAGAAATTaGTATGAAAAATGGATCAGG +
Preference number: 4 (lower is better)
Translates to: LVQFKYVAGGVGGLFTIVTMSRN*YEKWIR
Trigger: CCTGATCCATTTTTCATAGCAATTTCTGGACATGGT...TACAATGGTGAACAAGCCCCCTACGCCTCCTGCCACATATTTGAACTGTACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CCA 90 bp GAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATTTCCCAGAATCTTCCTaGTACAGTTCAAATATGTGG +
Preference number: 4 (lower is better)
Translates to: EANPVWRKPVSNTALGKHFPESS*YSSNMW
Trigger: CCACATATTTGAACTGTACCAGGAAGATTCTGGGAA...ATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS CCA 90 bp GCCCGGGTGGGCGGCATCACCACCAGGTTCACGCCGAGAAGGAGCTaGAGGAGAGCCGCCCGGCTCCAGCCGGACCGCTTGCCCGCCATC +
Preference number: 5 (lower is better)
Translates to: ARVGGITTRFTPRRS*RRAARLQPDRLPAI
Trigger: GATGGCGGGCAAGCGGTCCGGCTGGAGCCGGGCGGCTCTCCTCCAGCTCCTTCTCGGCGTGAACCTGGTGGTGATGCCGCCCACCCGGGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672166.1
ENST00000672636.2
ENST00000672787.1
ENST00000673184.1
ENST00000673511.1
ENST00000673562.1
ENST00000673604.1
CDS-3UTR CAA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGAAGGGGGCTGAGTGGTaGTCAGGCGTGGTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWKGAEW*SGVVLP
Trigger: GGGGAGGACCACGCCTGACAACCACTCAGCCCCCTT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CAA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGAGCGGCCAGGGGGCCTaGTCACTCTCGTTCCGAAAG +
Preference number: 5 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWSGQGA*SLSFRK
Trigger: CTTTCGGAACGAGAGTGACAAGGCCCCCTGGCCGCT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CAA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGTCCTGCTGCCAATCCTaGGGCACGACGGGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWSCCQS*GTTGSV
Trigger: CACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGA...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CAA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGCACGAGATGTTCGGGTaGAAGCGCTGCATCCCGTTG +
Preference number: 5 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWHEMFG*KRCIPL
Trigger: CAACGGGATGCAGCGCTTCAACCCGAACATCTCGTG...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CAA 90 bp GTTTGGGGTGAGGCCCAGGGCGGCAGGCGCAGCCCGTGCGTTTGCTCACAGAAGTCCTGCTGCCAATCCTaGGGCACGACGGGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: VWGEAQGGRRSPCVCSQKSCCQS*GTTGSV
Trigger: CACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGA...CTTCTGTGAGCAAACGCACGGGCTGCGCCTGCCGCCCTGGGCCTCACCCCAAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR CAA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGAAGAGTCCAGCCAGGTaGGCCTCAGCACTCATGAGA +
Preference number: 5 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWKSPAR*ASALMR
Trigger: TCTCATGAGTGCTGAGGCCAACCTGGCTGGACTCTT...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CAA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGGACATCCAGTGCCATTaGCAGGGCAACCAGGGTAGT +
Preference number: 5 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWDIQCH*QGNQGS
Trigger: ACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTC...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CAA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGGGAGGCGTAGGGGGCTaGTTCACCATTGTAGACATC +
Preference number: 5 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWGGVGG*FTIVDI
Trigger: GATGTCTACAATGGTGAACAAGCCCCCTACGCCTCC...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CAA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCAAGGGGGCTGAGTGGTaGTCAGGCGTGGTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: SPTRSSGWGHQREAQPRIKGAEW*SGVVLP
Trigger: GGGGAGGACCACGCCTGACAACCACTCAGCCCCCTT...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GCGGTAGCCAGGAGGCTGGGCCTGCATCCGGAAGAGGACGGTGAGGAGCAGCACCACGAGATGTTCGGGTaGAAGCGCTGCATCCCGTTG +
Preference number: 5 (lower is better)
Translates to: AVARRLGLHPEEDGEEQHHEMFG*KRCIPL
Trigger: CAACGGGATGCAGCGCTTCAACCCGAACATCTCGTG...GTGCTGCTCCTCACCGTCCTCTTCCGGATGCAGGCCCAGCCTCCTGGCTACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR CAA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWVSPVS*ATMSRN
Trigger: ATTTCTGGACATGGTGGCCAACGAGACAGGGCTTAC...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS TCA 90 bp TCCCGTGTTTCACAAGCACAGCCTCCCTGGACCTCCCCAGGGGCGTaGCGGTATCAGGCACTGTGTTCTACCGTCCTGGTGACCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SRVSQAQPPWTSPGA*RYQALCSTVLVTWA
Trigger: GGCCCAGGTCACCAGGACGGTAGAACACAGTGCCTGATACCGTCACGCCCCTGGGGAGGTCCAGGGAGGCTGTGCTTGTGAAACACGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671941.1
ENST00000672787.1
CDS GCA 90 bp CCGGCTCCAGCCGGACCGCTTGCCCGCCATCACCGTTGTAATCTATaGAGCAAACAAGCTGGAACCCGCTGGGTGGCACCTGCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: PAPAGPLARHHRCNL*SKQAGTRWVAPASS
Trigger: GCTGCTTGCAGGTGCCACCCAGCGGGTTCCAGCTTGTTTGCTGCATAGATTACAACGGTGATGGCGGGCAAGCGGTCCGGCTGGAGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256997.9
CDS-3UTR CAA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCGTGGCTGGCTGGCTGTaGGGTGATCCAGTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SPTRSSGWGHQREAQPRIVAGWL*GDPVPW
Trigger: CCAAGGAACTGGATCACCCAACAGCCAGCCAGCCAC...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGTCGCACATAAACCTCTaGCCGGTGATAAGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWSHINL*PVIRGV
Trigger: AACACCTCTTATCACCGGCAAGAGGTTTATGTGCGA...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
CDS-3UTR CAA 90 bp ATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCAAGAGTCCAGCCAGGTaGGCCTCAGCACTCATGAGA +
Preference number: 5 (lower is better)
Translates to: MGHAEPHSLIWLGSSEGGKSPAR*ASALMR
Trigger: TCTCATGAGTGCTGAGGCCAACCTGGCTGGACTCTT...GCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAAAAGAGTCCAGCCAGGTaGGCCTCAGCACTCATGAGA +
Preference number: 5 (lower is better)
Translates to: ATLSPTRSSGWGHQREAQKSPAR*ASALMR
Trigger: TCTCATGAGTGCTGAGGCCAACCTGGCTGGACTCTT...TTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGAAGAGTCCAGCCAGGTaGGCCTCAGCACTCATGAGA +
Preference number: 5 (lower is better)
Translates to: AEPHSLIWLGSSEGGPTQKSPAR*ASALMR
Trigger: TCTCATGAGTGCTGAGGCCAACCTGGCTGGACTCTT...CTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCAAGAGTCCAGCCAGGTaGGCCTCAGCACTCATGAGA +
Preference number: 5 (lower is better)
Translates to: HAEPHSLIWLGSSEGGPTKSPAR*ASALMR
Trigger: TCTCATGAGTGCTGAGGCCAACCTGGCTGGACTCTT...GGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GAGCGAGGGCCCAGCCCACCTCCCCTAGGAGGTGGAGGGAAGGGGGCTGAGTGGCACCATGTCCAGAAATaGTGCATTCCGAGAACTCTC +
Preference number: 5 (lower is better)
Translates to: ERGPSPPPLGGGGKGAEWHHVQK*CIPRTL
Trigger: GAGAGTTCTCGGAATGCACAATTTCTGGACATGGTG...CCACTCAGCCCCCTTCCCTCCACCTCCTAGGGGAGGTGGGCTGGGCCCTCGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
CDS-3UTR CAA 90 bp GCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGGAGGCGTAGGGGGCTaGTTCACCATTGTAGACATC +
Preference number: 5 (lower is better)
Translates to: AEPHSLIWLGSSEGGPTQGGVGG*FTIVDI
Trigger: GATGTCTACAATGGTGAACAAGCCCCCTACGCCTCC...CTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS GCA 90 bp AGGCGCAGCCCGTGCGTTTGCCTGTCCTCAGTGATGGGCACAGTGTaGACAGGAATAGGCTGCCACGAGATGTTCGGGTTGAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: RRSPCVCLSSVMGTV*TGIGCHEMFGLKRC
Trigger: GCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGCAAACGCACGGGCTGCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529444.7
CDS GCA 90 bp GCCTGCCTGTCCTCAGTGATGGGCACAGTGTGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTGAAGCGCTGCATCCCGTTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: ACLSSVMGTVCTGIG*HEMFGLKRCIPLGG
Trigger: CCCTCCCAACGGGATGCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS GCA 90 bp GTCCTGGTGACCTGGGCCTGCCTGTCCTCAGTGATGGGCACAGTGTaGACAGGAATAGGCTGCCACGAGATGTTCGGGTTGAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: VLVTWACLSSVMGTV*TGIGCHEMFGLKRC
Trigger: GCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGCAGGCCCAGGTCACCAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS CCA 90 bp CGCCATCACCGTTGTAATCTATGCAGCAAACAAGCTGGAACCCGCTaGGTGGCACCTGCAAGCAGCCGCCCGGACGCACCCGTAAGGACA +
Preference number: 5 (lower is better)
Translates to: RHHRCNLCSKQAGTR*VAPASSRPDAPVRT
Trigger: TGTCCTTACGGGTGCGTCCGGGCGGCTGCTTGCAGGTGCCACCCAGCGGGTTCCAGCTTGTTTGCTGCATAGATTACAACGGTGATGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256997.9
CDS CCA 90 bp TGGTGTCTGCCGGGTCTCGTTCTGCAGCTGCTCATAACGGGGACATaGGCCCAACGGGAACTTCAGCAGCCTGTCCTCAGTGATGGGCAC +
Preference number: 5 (lower is better)
Translates to: WCLPGLVLQLLITGT*AQRELQQPVLSDGH
Trigger: GTGCCCATCACTGAGGACAGGCTGCTGAAGTTCCCGTTGGGCCCATGTCCCCGTTATGAGCAGCTGCAGAACGAGACCCGGCAGACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
ENST00000672636.2
ENST00000673184.1
CDS-3UTR CAA 90 bp AGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGGATCGGAGGCGTAGGGGGCTaGTTCACCATTGTAGACATC +
Preference number: 5 (lower is better)
Translates to: SPTRSSGWGHQREAQPRIGGVGG*FTIVDI
Trigger: GATGTCTACAATGGTGAACAAGCCCCCTACGCCTCC...GATCCTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CAA 90 bp TGGGGTGAGGCCCAGGGCGGCAGGCGCAGCCCGTGCGTTTGCTCACAGAAGAGTTGTCCAACACAGCACTaGGTAAACATCAGGCATGGG +
Preference number: 5 (lower is better)
Translates to: WGEAQGGRRSPCVCSQKSCPTQH*VNIRHG
Trigger: CCCATGCCTGATGTTTACCAAGTGCTGTGTTGGACA...ACTCTTCTGTGAGCAAACGCACGGGCTGCGCCTGCCGCCCTGGGCCTCACCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS GCA 90 bp GTGTGCACAGGAATAGGCTGCCACGAGATGTTCGGGTTGAAGCGCTaGATCCCGTTGGGAGGGAAGAGTCCAGCCAGGTTGGCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: VCTGIGCHEMFGLKR*IPLGGKSPARLASA
Trigger: TGCTGAGGCCAACCTGGCTGGACTCTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
ENST00000672166.1
ENST00000672636.2
ENST00000672787.1
ENST00000673184.1
ENST00000673511.1
ENST00000673604.1
CDS GCA 90 bp AGCAGCCTGTCCTCAGTGATGGGCACAGTGTGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTGAAGCGCTGCATCCCGTTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: SSLSSVMGTVCTGIG*HEMFGLKRCIPLGG
Trigger: CCCTCCCAACGGGATGCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
ENST00000672636.2
ENST00000673184.1
CDS GCA 90 bp CAGTCCCTGTCCTCAGTGATGGGCACAGTGTGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTGAAGCGCTGCATCCCGTTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: QSLSSVMGTVCTGIG*HEMFGLKRCIPLGG
Trigger: CCCTCCCAACGGGATGCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS GCA 90 bp CTGCTCCTGTCCTCAGTGATGGGCACAGTGTGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTGAAGCGCTGCATCCCGTTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: LLLSSVMGTVCTGIG*HEMFGLKRCIPLGG
Trigger: CCCTCCCAACGGGATGCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673511.1
CDS-3UTR CAA 90 bp TGGGGTGAGGCCCAGGGCGGCAGGCGCAGCCCGTGCGTTTGCTCACAGAAGAGTTCGCACATAAACCTCTaGCCGGTGATAAGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: WGEAQGGRRSPCVCSQKSSHINL*PVIRGV
Trigger: AACACCTCTTATCACCGGCAAGAGGTTTATGTGCGA...ACTCTTCTGTGAGCAAACGCACGGGCTGCGCCTGCCGCCCTGGGCCTCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CAA 90 bp CTCCAGGGGGCAGCTCTCTTCCCTAGTGGGAAGGTGCCTGTGTGTGTGAGGGAGAAGAGTCCAGCCAGGTaGGCCTCAGCACTCATGAGA +
Preference number: 5 (lower is better)
Translates to: LQGAALFPSGKVPVCVREKSPAR*ASALMR
Trigger: TCTCATGAGTGCTGAGGCCAACCTGGCTGGACTCTT...CTCCCTCACACACACAGGCACCTTCCCACTAGGGAAGAGAGCTGCCCCCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR CAA 90 bp CCCTCCCAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGAGCGGCCAGGGGGCCTaGTCACTCTCGTTCCGAAAG +
Preference number: 5 (lower is better)
Translates to: PSQVQTTFRPAPVEGVTTSGQGA*SLSFRK
Trigger: CTTTCGGAACGAGAGTGACAAGGCCCCCTGGCCGCT...CGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTGGGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGTCCTGCTGCCAATCCTaGGGCACGACGGGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: LMVALARHREMWLAGCWVSCCQS*GTTGSV
Trigger: CACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGA...CACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp ATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCTGTCCAACACAGCACTaGGTAAACATCAGGCATGGG +
Preference number: 5 (lower is better)
Translates to: MGHAEPHSLIWLGSSEGGCPTQH*VNIRHG
Trigger: CCCATGCCTGATGTTTACCAAGTGCTGTGTTGGACA...GCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CAA 90 bp ATGGGCCACGCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCGGAGGCAAATCCTGTTaGGAGAAAGCCAGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: MGHAEPHSLIWLGSSEGGGGKSC*EKASVQ
Trigger: TTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCC...GCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGCGTGGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS GCA 90 bp CCCAACGGGAACTTCAGCAGCCTGTCCTCAGTGATGGGCACAGTGTaGACAGGAATAGGCTGCCACGAGATGTTCGGGTTGAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: PNGNFSSLSSVMGTV*TGIGCHEMFGLKRC
Trigger: GCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGCTGCTGAAGTTCCCGTTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
ENST00000672636.2
ENST00000673184.1
CDS GCA 90 bp GTTTGCCTGTCCTCAGTGATGGGCACAGTGTGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTGAAGCGCTGCATCCCGTTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: VCLSSVMGTVCTGIG*HEMFGLKRCIPLGG
Trigger: CCCTCCCAACGGGATGCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGCAAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529444.7
CDS GCA 90 bp CTTACCCTGTCCTCAGTGATGGGCACAGTGTGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTGAAGCGCTGCATCCCGTTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: LTLSSVMGTVCTGIG*HEMFGLKRCIPLGG
Trigger: CCCTCCCAACGGGATGCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGGTAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672166.1
CDS-3UTR CAA 90 bp CGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGCAGGGCAACCACTCCAGCCGGACCGCTaGCCCGCCATCACCGTTGTA +
Preference number: 5 (lower is better)
Translates to: RRGLVHHCRHPVPFAGQPLQPDR*PAITVV
Trigger: TACAACGGTGATGGCGGGCAAGCGGTCCGGCTGGAG...TGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCCTACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CAA 90 bp GCTGAGCCCCACTCGCTCATCTGGCTGGGGTCATCAGAGGGAGGCCCAACCCAGTCGCACATAAACCTCTaGCCGGTGATAAGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: AEPHSLIWLGSSEGGPTQSHINL*PVIRGV
Trigger: AACACCTCTTATCACCGGCAAGAGGTTTATGTGCGA...CTGGGTTGGGCCTCCCTCTGATGACCCCAGCCAGATGAGCGAGTGGGGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGAGCGGCCAGGGGGCCTaGTCACTCTCGTTCCGAAAG +
Preference number: 5 (lower is better)
Translates to: LSESNGGSSQTQGNVAGWSGQGA*SLSFRK
Trigger: CTTTCGGAACGAGAGTGACAAGGCCCCCTGGCCGCT...CCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp AGGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCAGCGGCCAGGGGGCCTaGTCACTCTCGTTCCGAAAG +
Preference number: 5 (lower is better)
Translates to: RERGGGKSCLEKASVQHSSGQGA*SLSFRK
Trigger: CTTTCGGAACGAGAGTGACAAGGCCCCCTGGCCGCT...GCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAATCCTAAGGGGGCTGAGTGGTaGTCAGGCGTGGTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: LTASLHLRCVGSVEEANPKGAEW*SGVVLP
Trigger: GGGGAGGACCACGCCTGACAACCACTCAGCCCCCTT...AGGATTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS GCA 90 bp ATCAGGGTCTCAGTCCTGCTCCTGTCCTCAGTGATGGGCACAGTGTaGACAGGAATAGGCTGCCACGAGATGTTCGGGTTGAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: IRVSVLLLSSVMGTV*TGIGCHEMFGLKRC
Trigger: GCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGAGCAGGACTGAGACCCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673511.1
CDS GCA 90 bp AATTGCCTGTCCTCAGTGATGGGCACAGTGTGCACAGGAATAGGCTaGCACGAGATGTTCGGGTTGAAGCGCTGCATCCCGTTGGGAGGG +
Preference number: 5 (lower is better)
Translates to: NCLSSVMGTVCTGIG*HEMFGLKRCIPLGG
Trigger: CCCTCCCAACGGGATGCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGCAATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673604.1
CDS-3UTR CAA 90 bp CTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACTCCAGCCGGACCGCTaGCCCGCCATCACCGTTGTA +
Preference number: 5 (lower is better)
Translates to: LPQPYSGPQSRTFFSSSQLQPDR*PAITVV
Trigger: TACAACGGTGATGGCGGGCAAGCGGTCCGGCTGGAG...TTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGATTCCTCTCCAGCCGGACCGCTaGCCCGCCATCACCGTTGTA +
Preference number: 5 (lower is better)
Translates to: QVQTTFRPAPVEGVTTIPLQPDR*PAITVV
Trigger: TACAACGGTGATGGCGGGCAAGCGGTCCGGCTGGAG...AGGAATCGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GGCCAGGGGGCCTTGTCACTCTCGTTCCGAAAGTACATCTCCACTGAGAAATTCAGCGGCCAGGGGGCCTaGTCACTCTCGTTCCGAAAG +
Preference number: 5 (lower is better)
Translates to: GQGALSLSFRKYISTEKFSGQGA*SLSFRK
Trigger: CTTTCGGAACGAGAGTGACAAGGCCCCCTGGCCGCT...GAATTTCTCAGTGGAGATGTACTTTCGGAACGAGAGTGACAAGGCCCCCTGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CAA 90 bp GCCCGTGCGTTTGCTCACAGAAGAGTGTGTCATAGACATTCCAGACGGTCTCCAAGCGGCCAGGGGGCCTaGTCACTCTCGTTCCGAAAG +
Preference number: 5 (lower is better)
Translates to: ARAFAHRRVCHRHSRRSPSGQGA*SLSFRK
Trigger: CTTTCGGAACGAGAGTGACAAGGCCCCCTGGCCGCT...TGGAGACCGTCTGGAATGTCTATGACACACTCTTCTGTGAGCAAACGCACGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CAA 90 bp AACACTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAAAAGGGGGCTGAGTGGTaGTCAGGCGTGGTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: NTDCQFTSQVCRERGGGKKGAEW*SGVVLP
Trigger: GGGGAGGACCACGCCTGACAACCACTCAGCCCCCTT...TTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp ATTCCCAGAATCTTCCTGGTACAGTTCAAATATGTGGCAGGAGGCGTAGGGGGCAAGGGGGCTGAGTGGTaGTCAGGCGTGGTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: IPRIFLVQFKYVAGGVGGKGAEW*SGVVLP
Trigger: GGGGAGGACCACGCCTGACAACCACTCAGCCCCCTT...GCCCCCTACGCCTCCTGCCACATATTTGAACTGTACCAGGAAGATTCTGGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS-3UTR CAA 90 bp GGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACGTGGCTGGCTGGCTGTaGGGTGATCCAGTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GAWRRQILFGESQCPTQHVAGWL*GDPVPW
Trigger: CCAAGGAACTGGATCACCCAACAGCCAGCCAGCCAC...GTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp AGGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCGTGGCTGGCTGGCTGTaGGGTGATCCAGTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: RERGGGKSCLEKASVQHSVAGWL*GDPVPW
Trigger: CCAAGGAACTGGATCACCCAACAGCCAGCCAGCCAC...GCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS GCA 90 bp AATGGATCAGGGTCTCAGTCCCTGTCCTCAGTGATGGGCACAGTGTaGACAGGAATAGGCTGCCACGAGATGTTCGGGTTGAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: NGSGSQSLSSVMGTV*TGIGCHEMFGLKRC
Trigger: GCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGGACTGAGACCCTGATCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672075.1
CDS GCA 90 bp GCCACCATGTCCAGAAATTGCCTGTCCTCAGTGATGGGCACAGTGTaGACAGGAATAGGCTGCCACGAGATGTTCGGGTTGAAGCGCTGC +
Preference number: 5 (lower is better)
Translates to: ATMSRNCLSSVMGTV*TGIGCHEMFGLKRC
Trigger: GCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGCAATTTCTGGACATGGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673604.1
CDS GCA 90 bp GGCTCCCTGAGGGCAAAAGATGAGGGCAGCATACCTTGTTCCCCTTaGCTCTGGAGCTCCCAACCTTACCTCTTGCCGGTGATAAGAGGT +
Preference number: 5 (lower is better)
Translates to: GSLRAKDEGSIPCSP*LWSSQPYLLPVIRG
Trigger: ACCTCTTATCACCGGCAAGAGGTAAGGTTGGGAGCTCCAGAGGCAAGGGGAACAAGGTATGCTGCCCTCATCTTTTGCCCTCAGGGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673562.1
CDS CCA 90 bp CAAGGGTTAAGAGGGTCTAGAGGGAAGGGGTGGCTTCAAGCCCCATaGGGTTTAGGCCCTGTTGCTTTCCAGGTTCACGCTTTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: QGLRGSRGKGWLQAP*GLGPVAFQVHALLE
Trigger: CTCCAGCAAAGCGTGAACCTGGAAAGCAACAGGGCCTAAACCCCATGGGGCTTGAAGCCACCCCTTCCCTCTAGACCCTCTTAACCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673184.1
CDS-3UTR CAA 90 bp GGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTCTCCAGCCGGACCGCTaGCCCGCCATCACCGTTGTA +
Preference number: 5 (lower is better)
Translates to: GPQSRTFFSSSQPACSSGLQPDR*PAITVV
Trigger: TACAACGGTGATGGCGGGCAAGCGGTCCGGCTGGAG...ACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGCACGAGATGTTCGGGTaGAAGCGCTGCATCCCGTTG +
Preference number: 5 (lower is better)
Translates to: ESNGGSSQTQGNVAGWLLHEMFG*KRCIPL
Trigger: CAACGGGATGCAGCGCTTCAACCCGAACATCTCGTG...CAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTCACGAGATGTTCGGGTaGAAGCGCTGCATCCCGTTG +
Preference number: 5 (lower is better)
Translates to: LSLMVALARHREMWLAGCHEMFG*KRCIPL
Trigger: CAACGGGATGCAGCGCTTCAACCCGAACATCTCGTG...ACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GCGCAGCCCGTGCGTTTGCTCACAGAAGAGTGTGTCATAGACATTCCAGACGGTCACGAGATGTTCGGGTaGAAGCGCTGCATCCCGTTG +
Preference number: 5 (lower is better)
Translates to: AQPVRLLTEECVIDIPDGHEMFG*KRCIPL
Trigger: CAACGGGATGCAGCGCTTCAACCCGAACATCTCGTG...ACCGTCTGGAATGTCTATGACACACTCTTCTGTGAGCAAACGCACGGGCTGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CAA 90 bp AACACTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAAAGCGGCCAGGGGGCCTaGTCACTCTCGTTCCGAAAG +
Preference number: 5 (lower is better)
Translates to: NTDCQFTSQVCRERGGGKSGQGA*SLSFRK
Trigger: CTTTCGGAACGAGAGTGACAAGGCCCCCTGGCCGCT...TTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CAGTCCAATAGGAAACAGCACTATTCATTCTCTGGGAGCTGCCCCAGCCCTATTAAGGGGGCTGAGTGGTaGTCAGGCGTGGTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: QSNRKQHYSFSGSCPSPIKGAEW*SGVVLP
Trigger: GGGGAGGACCACGCCTGACAACCACTCAGCCCCCTT...AATAGGGCTGGGGCAGCTCCCAGAGAATGAATAGTGCTGTTTCCTATTGGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGATCCAGTTCCTTAAGAGTCCAGCCAGGTaGGCCTCAGCACTCATGAGA +
Preference number: 5 (lower is better)
Translates to: LARHREMWLAGCWVIQFLKSPAR*ASALMR
Trigger: TCTCATGAGTGCTGAGGCCAACCTGGCTGGACTCTT...AAGGAACTGGATCACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTAAGAGTCCAGCCAGGTaGGCCTCAGCACTCATGAGA +
Preference number: 5 (lower is better)
Translates to: LSLMVALARHREMWLAGCKSPAR*ASALMR
Trigger: TCTCATGAGTGCTGAGGCCAACCTGGCTGGACTCTT...ACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCAGGAGGCGTAGGGGGCTaGTTCACCATTGTAGACATC +
Preference number: 5 (lower is better)
Translates to: GSVEEANPVWRKPVSNTAGGVGG*FTIVDI
Trigger: GATGTCTACAATGGTGAACAAGCCCCCTACGCCTCC...TGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CAGTCCAATAGGAAACAGCACTATTCATTCTCTGGGAGCTGCCCCAGCCCTATTTCCTGCTGCCAATCCTaGGGCACGACGGGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: QSNRKQHYSFSGSCPSPISCCQS*GTTGSV
Trigger: CACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGA...AATAGGGCTGGGGCAGCTCCCAGAGAATGAATAGTGCTGTTTCCTATTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GATCCAGTTCCTTGGGAGCCAATGTTTGTACCCCTGGTATTAGCTGTTTTTCCCAAGGGGGCTGAGTGGTaGTCAGGCGTGGTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: DPVPWEPMFVPLVLAVFPKGAEW*SGVVLP
Trigger: GGGGAGGACCACGCCTGACAACCACTCAGCCCCCTT...GGGAAAAACAGCTAATACCAGGGGTACAAACATTGGCTCCCAAGGAACTGGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp TCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGGGTGTCCCTCTGAGCTATTaGCCGAAGACTTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SNGGSSQTQGNVAGWLLGVPLSY*PKTSGW
Trigger: CCAGCCTGAAGTCTTCGGCAAATAGCTCAGAGGGAC...ACCCAACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCAGTCCCTCTGAGCTATTaGCCGAAGACTTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: GSVEEANPVWRKPVSNTAVPLSY*PKTSGW
Trigger: CCAGCCTGAAGTCTTCGGCAAATAGCTCAGAGGGAC...TGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTCTAATCGCGCAGCCCGTGCGTTaGCCTGTCCTCAGTGATGGG +
Preference number: 5 (lower is better)
Translates to: GLDRSARWIQHQLCHFLIAQPVR*PVLSDG
Trigger: CCCATCACTGAGGACAGGCAAACGCACGGGCTGCGC...GATTAGAAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529444.7
CDS-3UTR CAA 90 bp AGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATCCTCCAGCCGGACCGCTaGCCCGCCATCACCGTTGTA +
Preference number: 5 (lower is better)
Translates to: RQILFGESQCPTQHLVNILQPDR*PAITVV
Trigger: TACAACGGTGATGGCGGGCAAGCGGTCCGGCTGGAG...GATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GCAGCCCGTGCGTTTGCTCACAGAAGAGTGTGTCATAGACATTCCAGACGGTCTAAGAGTCCAGCCAGGTaGGCCTCAGCACTCATGAGA +
Preference number: 5 (lower is better)
Translates to: AARAFAHRRVCHRHSRRSKSPAR*ASALMR
Trigger: TCTCATGAGTGCTGAGGCCAACCTGGCTGGACTCTT...AGACCGTCTGGAATGTCTATGACACACTCTTCTGTGAGCAAACGCACGGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CAA 90 bp GGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTTGCAGGGCAACCAGGGTGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: GGLFTIVDIQCHLQGNQGVSPVS*ATMSRN
Trigger: ATTTCTGGACATGGTGGCCAACGAGACAGGGCTTAC...ACCCTGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAAGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CAA 90 bp GGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCAGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: GSVEEANPVWRKPVSNTAVSPVS*ATMSRN
Trigger: ATTTCTGGACATGGTGGCCAACGAGACAGGGCTTAC...TGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAATCCTGCTGCCAATCCTaGGGCACGACGGGCTCTGTG +
Preference number: 5 (lower is better)
Translates to: EEANPVWRKPVSNTALGKSCCQS*GTTGSV
Trigger: CACAGAGCCCGTCGTGCCCAAGGATTGGCAGCAGGA...TTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GCCCAGCTGAGGGAGAGCAGTTTCCTGATTCGTGTGACAAGCAACTCCCTTCCCGGAGGCAAATCCTGTTaGGAGAAAGCCAGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: AQLRESSFLIRVTSNSLPGGKSC*EKASVQ
Trigger: TTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCC...GGGAAGGGAGTTGCTTGTCACACGAATCAGGAAACTGCTCTCCCTCAGCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CCTGAAGCATTCTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGGTGGCTGGCTGGCTGTaGGGTGATCCAGTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: PEAFCLSLMVALARHREMVAGWL*GDPVPW
Trigger: CCAAGGAACTGGATCACCCAACAGCCAGCCAGCCAC...CATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAGAATGCTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS TCA 90 bp CCATTCTTCTTCCTGATAGGGGTCCTTGGGATATGTCTTCACTGGTaGACGGTCTCCATGGCGGTACAGCCCGACGTATTCGGTCATCCT +
Preference number: 5 (lower is better)
Translates to: PFFFLIGVLGICLHW*TVSMAVQPDVFGHP
Trigger: AGGATGACCGAATACGTCGGGCTGTACCGCCATGGAGACCGTTCACCAGTGAAGACATATCCCAAGGACCCCTATCAGGAAGAAGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533929.7
CDS-3UTR CAA 90 bp TCTGTCACCCATGAGGGAAGTTCCCGTGTTTCACAAGCACAGCCTCCCTGGACCTCGCACATAAACCTCTaGCCGGTGATAAGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: SVTHEGSSRVSQAQPPWTSHINL*PVIRGV
Trigger: AACACCTCTTATCACCGGCAAGAGGTTTATGTGCGA...GGTCCAGGGAGGCTGTGCTTGTGAAACACGGGAACTTCCCTCATGGGTGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR CAA 90 bp TGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTACACGAGATGTTCGGGTaGAAGCGCTGCATCCCGTTG +
Preference number: 5 (lower is better)
Translates to: WRRQILFGESQCPTQHLVHEMFG*KRCIPL
Trigger: CAACGGGATGCAGCGCTTCAACCCGAACATCTCGTG...TACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp ACAGGAAAGGAAGCTCAGGCACAAAAAGTGAGACTCAGCAGAAAGGAGCTCTGGCACGAGATGTTCGGGTaGAAGCGCTGCATCCCGTTG +
Preference number: 5 (lower is better)
Translates to: TGKEAQAQKVRLSRKELWHEMFG*KRCIPL
Trigger: CAACGGGATGCAGCGCTTCAACCCGAACATCTCGTG...CCAGAGCTCCTTTCTGCTGAGTCTCACTTTTTGTGCCTGAGCTTCCTTTCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000672787.1
CDS-3UTR CAA 90 bp CAAGTACAGACAACCTTCCGTCCTGCTCCAGTTGAAGGGGTGACAACGATTCCTGACATCCAGTGCCATTaGCAGGGCAACCAGGGTAGT +
Preference number: 5 (lower is better)
Translates to: QVQTTFRPAPVEGVTTIPDIQCH*QGNQGS
Trigger: ACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTC...AGGAATCGTTGTCACCCCTTCAACTGGAGCAGGACGGAAGGTTGTCTGTACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTTGTCCAACACAGCACTaGGTAAACATCAGGCATGGG +
Preference number: 5 (lower is better)
Translates to: LSLMVALARHREMWLAGCCPTQH*VNIRHG
Trigger: CCCATGCCTGATGTTTACCAAGTGCTGTGTTGGACA...ACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GGGAGCTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTGGAGGCAAATCCTGTTaGGAGAAAGCCAGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: GSCPSPILGHSLELSFPAGGKSC*EKASVQ
Trigger: TTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCC...AGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAGCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp AGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTTCAGGCGGAGGCAAATCCTGTTaGGAGAAAGCCAGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: STERQDRVPLSYLPKTSGGGKSC*EKASVQ
Trigger: TTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCC...GCCTGAAGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS TCA 90 bp CCATTCTTCTTCCTGATAGGGGTCCTTGGGATATGTCTTCACTGGTaGACGGTCTCCATGGCGGTACAGCAAGGTAACGAAGCGCAGACT +
Preference number: 5 (lower is better)
Translates to: PFFFLIGVLGICLHW*TVSMAVQQGNEAQT
Trigger: AGTCTGCGCTTCGTTACCTTGCTGTACCGCCATGGAGACCGTTCACCAGTGAAGACATATCCCAAGGACCCCTATCAGGAAGAAGAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672166.1
ENST00000672636.2
ENST00000672787.1
ENST00000673184.1
ENST00000673511.1
ENST00000673562.1
ENST00000673604.1
CDS CCA 90 bp AGCCCTGTCTCGTTGGCCACCATGTCCAGAAATTGCTATGAAAAATaGATCAGGGTCTCAGTCCTGCTCCTGTCCTCAGTGATGGGCACA +
Preference number: 5 (lower is better)
Translates to: SPVSLATMSRNCYEK*IRVSVLLLSSVMGT
Trigger: TGTGCCCATCACTGAGGACAGGAGCAGGACTGAGACCCTGATCCATTTTTCATAGCAATTTCTGGACATGGTGGCCAACGAGACAGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673511.1
CDS-3UTR CAA 90 bp CTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGTCGCACATAAACCTCTaGCCGGTGATAAGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: LSESNGGSSQTQGNVAGWSHINL*PVIRGV
Trigger: AACACCTCTTATCACCGGCAAGAGGTTTATGTGCGA...CCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GGGAGCTGCCCCAGCCCTATTCTGGGCCACAGTCTAGAACTTTCTTTTCCAGCTTCGCACATAAACCTCTaGCCGGTGATAAGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: GSCPSPILGHSLELSFPASHINL*PVIRGV
Trigger: AACACCTCTTATCACCGGCAAGAGGTTTATGTGCGA...AGCTGGAAAAGAAAGTTCTAGACTGTGGCCCAGAATAGGGCTGGGGCAGCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTCGCACATAAACCTCTaGCCGGTGATAAGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: GAWRRQILFGESQCPTQHSHINL*PVIRGV
Trigger: AACACCTCTTATCACCGGCAAGAGGTTTATGTGCGA...GTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp ATTCCGAAGAGGAAGCGGAAGCTGAAGTCCTTTAGCCGGCTGAGACGCTGCATGTCGCACATAAACCTCTaGCCGGTGATAAGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: IPKRKRKLKSFSRLRRCMSHINL*PVIRGV
Trigger: AACACCTCTTATCACCGGCAAGAGGTTTATGTGCGA...CATGCAGCGTCTCAGCCGGCTAAAGGACTTCAGCTTCCGCTTCCTCTTCGGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CAA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACCACGAGATGTTCGGGTaGAAGCGCTGCATCCCGTTG +
Preference number: 5 (lower is better)
Translates to: RRQILFGESQCPTQHLVNHEMFG*KRCIPL
Trigger: CAACGGGATGCAGCGCTTCAACCCGAACATCTCGTG...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGCTGGCTGTCACCATGTCCAGAAATaGTGCATTCCGAGAACTCTC +
Preference number: 5 (lower is better)
Translates to: LSLMVALARHREMWLAGCHHVQK*CIPRTL
Trigger: GAGAGTTCTCGGAATGCACAATTTCTGGACATGGTG...ACAGCCAGCCAGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACACCATGTCCAGAAATaGTGCATTCCGAGAACTCTC +
Preference number: 5 (lower is better)
Translates to: GSVEEANPVWRKPVSNTAHHVQK*CIPRTL
Trigger: GAGAGTTCTCGGAATGCACAATTTCTGGACATGGTG...TGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp CTGGTACAGTTCAAATATGTGGCAGGAGGCGTAGGGGGCTTGTTCACCATTGTAGACATCCAGTGCCATTaGCAGGGCAACCAGGGTAGT +
Preference number: 5 (lower is better)
Translates to: LVQFKYVAGGVGGLFTIVDIQCH*QGNQGS
Trigger: ACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTC...TACAATGGTGAACAAGCCCCCTACGCCTCCTGCCACATATTTGAACTGTACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CAA 90 bp TTGTTCACCATTGTAGACATCCAGTGCCATTTGCAGGGCAACCAGGGTAGTGTCGACATCCAGTGCCATTaGCAGGGCAACCAGGGTAGT +
Preference number: 5 (lower is better)
Translates to: LFTIVDIQCHLQGNQGSVDIQCH*QGNQGS
Trigger: ACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTC...GACACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTCTACAATGGTGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CAA 90 bp AGCATTCTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTGGAGGCGTAGGGGGCTaGTTCACCATTGTAGACATC +
Preference number: 5 (lower is better)
Translates to: SILSESNGGSSQTQGNVAGGVGG*FTIVDI
Trigger: GATGTCTACAATGGTGAACAAGCCCCCTACGCCTCC...AGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAGAATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS CCA 90 bp CATGTCCAGAAATTGTGCATTCCGAGAACTCTCATTCTGATACTCTaGTGTCTGCCGGGTCTCGTTCTGCAGCTGCTCATAACGGGGACA +
Preference number: 5 (lower is better)
Translates to: HVQKLCIPRTLILIL*CLPGLVLQLLITGT
Trigger: TGTCCCCGTTATGAGCAGCTGCAGAACGAGACCCGGCAGACACCAGAGTATCAGAATGAGAGTTCTCGGAATGCACAATTTCTGGACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
ENST00000672351.1
ENST00000672636.2
ENST00000673184.1
CDS-3UTR CAA 90 bp GGGCCACAGTCTAGAACTTTCTTTTCCAGCTCACAACCTGCATGTAGCTCAGGTGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: GPQSRTFFSSSQPACSSGVSPVS*ATMSRN
Trigger: ATTTCTGGACATGGTGGCCAACGAGACAGGGCTTAC...ACCTGAGCTACATGCAGGTTGTGAGCTGGAAAAGAAAGTTCTAGACTGTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000256997.9
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp TGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: WRRQILFGESQCPTQHLVVSPVS*ATMSRN
Trigger: ATTTCTGGACATGGTGGCCAACGAGACAGGGCTTAC...TACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACGACATCCAGTGCCATTaGCAGGGCAACCAGGGTAGT +
Preference number: 5 (lower is better)
Translates to: RRQILFGESQCPTQHLVNDIQCH*QGNQGS
Trigger: ACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTC...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTCTAATCGACATCCAGTGCCATTaGCAGGGCAACCAGGGTAGT +
Preference number: 5 (lower is better)
Translates to: GLDRSARWIQHQLCHFLIDIQCH*QGNQGS
Trigger: ACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTC...GATTAGAAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp AAAATAAGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTGGAGGCGTAGGGGGCTaGTTCACCATTGTAGACATC +
Preference number: 5 (lower is better)
Translates to: KISTERQDRVPLSYLPKTGGVGG*FTIVDI
Trigger: GATGTCTACAATGGTGAACAAGCCCCCTACGCCTCC...AGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCTTATTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp AGGGAGCGTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCGAAAAAGAACAGGGCTaGATAGAAGTGCAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: RERGGGKSCLEKASVQHSEKEQG*IEVQGG
Trigger: TCCACCTTGCACTTCTATCAAGCCCTGTTCTTTTTC...GCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCACGCTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GATCCAGTTCCTTGGGAGCCAATGTTTGTACCCCTGGTATTAGCTGTTTTTCCCGTCCCTCTGAGCTATTaGCCGAAGACTTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: DPVPWEPMFVPLVLAVFPVPLSY*PKTSGW
Trigger: CCAGCCTGAAGTCTTCGGCAAATAGCTCAGAGGGAC...GGGAAAAACAGCTAATACCAGGGGTACAAACATTGGCTCCCAAGGAACTGGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAAGTCCCTCTGAGCTATTaGCCGAAGACTTCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: EEANPVWRKPVSNTALGKVPLSY*PKTSGW
Trigger: CCAGCCTGAAGTCTTCGGCAAATAGCTCAGAGGGAC...TTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS TCA 90 bp GTCTGTAAGCCCTGTCTCGTTGGCCACCATGTCCAGAAATTGCTATaGAAAATGGATCAGGGTCTCAGTCCTGCTCCTGTCCTCAGTGAT +
Preference number: 5 (lower is better)
Translates to: VCKPCLVGHHVQKLL*KMDQGLSPAPVLSD
Trigger: ATCACTGAGGACAGGAGCAGGACTGAGACCCTGATCCATTTTTCATAGCAATTTCTGGACATGGTGGCCAACGAGACAGGGCTTACAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673511.1
CDS-3UTR CAA 90 bp GTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTCACCATGTCCAGAAATaGTGCATTCCGAGAACTCTC +
Preference number: 5 (lower is better)
Translates to: VEEANPVWRKPVSNTALGHHVQK*CIPRTL
Trigger: GAGAGTTCTCGGAATGCACAATTTCTGGACATGGTG...ACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp AGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: RRQILFGESQCPTQHLVNVSPVS*ATMSRN
Trigger: ATTTCTGGACATGGTGGCCAACGAGACAGGGCTTAC...GTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATGACATCCAGTGCCATTaGCAGGGCAACCAGGGTAGT +
Preference number: 5 (lower is better)
Translates to: EANPVWRKPVSNTALGKHDIQCH*QGNQGS
Trigger: ACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTC...ATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp AGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTAAACATCGGAGGCGTAGGGGGCTaGTTCACCATTGTAGACATC +
Preference number: 5 (lower is better)
Translates to: RQILFGESQCPTQHLVNIGGVGG*FTIVDI
Trigger: GATGTCTACAATGGTGAACAAGCCCCCTACGCCTCC...GATGTTTACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp AGCATTCTGTCTGAGTCTAATGGTGGCTCTAGCCAGACACAGGGAAATGTGGCTTCGCACATAAACCTCTaGCCGGTGATAAGAGGTGTT +
Preference number: 5 (lower is better)
Translates to: SILSESNGGSSQTQGNVASHINL*PVIRGV
Trigger: AACACCTCTTATCACCGGCAAGAGGTTTATGTGCGA...AGCCACATTTCCCTGTGTCTGGCTAGAGCCACCATTAGACTCAGACAGAATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GTATTAGCTGTTTTTCCCACTAAAATAAGCACTGAGAGGCAAGACCGTGTCCCTGACATCCAGTGCCATTaGCAGGGCAACCAGGGTAGT +
Preference number: 5 (lower is better)
Translates to: VLAVFPTKISTERQDRVPDIQCH*QGNQGS
Trigger: ACTACCCTGGTTGCCCTGCAAATGGCACTGGATGTC...AGGGACACGGTCTTGCCTCTCAGTGCTTATTTTAGTGGGAAAAACAGCTAATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp TTGTCACTCTCGTTCCGAAAGTACATCTCCACTGAGAAATTCCCAGAATCTTCCGGAGGCGTAGGGGGCTaGTTCACCATTGTAGACATC +
Preference number: 5 (lower is better)
Translates to: LSLSFRKYISTEKFPESSGGVGG*FTIVDI
Trigger: GATGTCTACAATGGTGAACAAGCCCCCTACGCCTCC...GGAAGATTCTGGGAATTTCTCAGTGGAGATGTACTTTCGGAACGAGAGTGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672075.1
ENST00000673511.1
CDS-3UTR CAA 90 bp GATCCAGTTCCTTGGGAGCCAATGTTTGTACCCCTGGTATTAGCTGTTTTTCCCTGTCCAACACAGCACTaGGTAAACATCAGGCATGGG +
Preference number: 5 (lower is better)
Translates to: DPVPWEPMFVPLVLAVFPCPTQH*VNIRHG
Trigger: CCCATGCCTGATGTTTACCAAGTGCTGTGTTGGACA...GGGAAAAACAGCTAATACCAGGGGTACAAACATTGGCTCCCAAGGAACTGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp AGAACAGGGCTTGATAGAAGTGCAAGGTGGATCCAGCACCAACTCTGCCATTTTGGAGGCAAATCCTGTTaGGAGAAAGCCAGTGTCCAA +
Preference number: 5 (lower is better)
Translates to: RTGLDRSARWIQHQLCHFGGKSC*EKASVQ
Trigger: TTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCC...AAAATGGCAGAGTTGGTGCTGGATCCACCTTGCACTTCTATCAAGCCCTGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp GTGGAGGAGGCAAATCCTGTTTGGAGAAAGCCAGTGTCCAACACAGCACTTGGTGAAAAAGAACAGGGCTaGATAGAAGTGCAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: VEEANPVWRKPVSNTALGEKEQG*IEVQGG
Trigger: TCCACCTTGCACTTCTATCAAGCCCTGTTCTTTTTC...ACCAAGTGCTGTGTTGGACACTGGCTTTCTCCAAACAGGATTTGCCTCCTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS-3UTR CAA 90 bp AACACTGACTGCCAGTTTACATCTCAGGTGTGTAGGGAGCGTGGAGGAGGCAAAGAAAAAGAACAGGGCTaGATAGAAGTGCAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: NTDCQFTSQVCRERGGGKEKEQG*IEVQGG
Trigger: TCCACCTTGCACTTCTATCAAGCCCTGTTCTTTTTC...TTTGCCTCCTCCACGCTCCCTACACACCTGAGATGTAAACTGGCAGTCAGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS TCA 90 bp GCCCTGTTGCTTTCCAGGTTCACGCTTTGCTGGAGTCAATTAATCTaGTCCCAGAAGTCTTTCATTAAGTGGCCAGTCATGCACAGCAAT +
Preference number: 5 (lower is better)
Translates to: ALLLSRFTLCWSQLI*SQKSFIKWPVMHSN
Trigger: ATTGCTGTGCATGACTGGCCACTTAATGAAAGACTTCTGGGATCAGATTAATTGACTCCAGCAAAGCGTGAACCTGGAAAGCAACAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673184.1
CDS-3UTR CAA 90 bp AAAATAAGCACTGAGAGGCAAGACCGTGTCCCTCTGAGCTATTTGCCGAAGACTGAAAAAGAACAGGGCTaGATAGAAGTGCAAGGTGGA +
Preference number: 5 (lower is better)
Translates to: KISTERQDRVPLSYLPKTEKEQG*IEVQGG
Trigger: TCCACCTTGCACTTCTATCAAGCCCTGTTCTTTTTC...AGTCTTCGGCAAATAGCTCAGAGGGACACGGTCTTGCCTCTCAGTGCTTATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672636.2
CDS TCA 90 bp GGCCAGTCATGCACAGCAATATCATGGGCACAGAGATTAAGGTTATaGAATCTGGTCAAAGTCAGCACCCATATGGGAAAAGGCAGTTTA +
Preference number: 5 (lower is better)
Translates to: GQSCTAISWAQRLRL*NLVKVSTHMGKGSL
Trigger: TAAACTGCCTTTTCCCATATGGGTGCTGACTTTGACCAGATTTCATAACCTTAATCTCTGTGCCCATGATATTGCTGTGCATGACTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673184.1
CDS CCA 72 bp GGCGGCATCACCACCAGGTTCACGCCGAGAAGGAGCTaGAGGAGAGCCGCCCGGCTCCAGCCGGACCGCTTG +
Preference number: 6 (lower is better)
Translates to: GGITTRFTPRRS*RRAARLQPDRL
Trigger: CAAGCGGTCCGGCTGGAGCCGGGCGGCTCTCCTCCAGCTCCTTCTCGGCGTGAACCTGGTGGTGATGCCGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672166.1
ENST00000672636.2
ENST00000672787.1
ENST00000673184.1
ENST00000673511.1
ENST00000673562.1
ENST00000673604.1
CDS CAA 72 bp AGCTGGAGGAGAGCCGCCCGGCTCCAGCCGGACCGCTaGCCCGCCATCACCGTTGTAATCTATGCAGCAAAC +
Preference number: 6 (lower is better)
Translates to: SWRRAARLQPDR*PAITVVIYAAN
Trigger: GTTTGCTGCATAGATTACAACGGTGATGGCGGGCAAGCGGTCCGGCTGGAGCCGGGCGGCTCTCCTCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000672073.1
ENST00000672075.1
ENST00000672166.1
ENST00000672636.2
ENST00000673184.1
ENST00000673511.1
ENST00000673562.1
ENST00000673604.1
CDS TCA 72 bp TCACAAGCACAGCCTCCCTGGACCTCCCCAGGGGCGTaGCGGTATCAGGCACTGTGTTCTACCGTCCTGGTG +
Preference number: 6 (lower is better)
Translates to: SQAQPPWTSPGA*RYQALCSTVLV
Trigger: CACCAGGACGGTAGAACACAGTGCCTGATACCGTCACGCCCCTGGGGAGGTCCAGGGAGGCTGTGCTTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000671941.1
ENST00000672787.1
CDS CCA 72 bp CGTTGTAATCTATGCAGCAAACAAGCTGGAACCCGCTaGGTGGCACCTGCAAGCAGCCGCCCGGACGCACCC +
Preference number: 6 (lower is better)
Translates to: RCNLCSKQAGTR*VAPASSRPDAP
Trigger: GGGTGCGTCCGGGCGGCTGCTTGCAGGTGCCACCCAGCGGGTTCCAGCTTGTTTGCTGCATAGATTACAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000256997.9
CDS CCA 72 bp CCGGGTCTCGTTCTGCAGCTGCTCATAACGGGGACATaGGCCCAACGGGAACTTCAGCAGCCTGTCCTCAGT +
Preference number: 6 (lower is better)
Translates to: PGLVLQLLITGT*AQRELQQPVLS
Trigger: ACTGAGGACAGGCTGCTGAAGTTCCCGTTGGGCCCATGTCCCCGTTATGAGCAGCTGCAGAACGAGACCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
ENST00000672636.2
ENST00000673184.1
CDS GCA 72 bp GGAATAGGCTGCCACGAGATGTTCGGGTTGAAGCGCTaGATCCCGTTGGGAGGGAAGAGTCCAGCCAGGTTG +
Preference number: 6 (lower is better)
Translates to: GIGCHEMFGLKR*IPLGGKSPARL
Trigger: CAACCTGGCTGGACTCTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
ENST00000672166.1
ENST00000672636.2
ENST00000672787.1
ENST00000673184.1
ENST00000673511.1
ENST00000673604.1
CDS CAA 90 bp GGAATAGGCTGCCACGAGATGTTCGGGTTGAAGCGCTGCATCCCGTaGGGAGGGAAGAGTCCAGCCAGGTTGGCCTCAGCACTCATGAGA +
Preference number: 6 (lower is better)
Translates to: GIGCHEMFGLKRCIP*GGKSPARLASALMR
Trigger: TCTCATGAGTGCTGAGGCCAACCTGGCTGGACTCTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
ENST00000672166.1
ENST00000672636.2
ENST00000672787.1
ENST00000673184.1
ENST00000673511.1
ENST00000673604.1
CDS CAA 90 bp ATGGGCACAGTGTGCACAGGAATAGGCTGCCACGAGATGTTCGGGTaGAAGCGCTGCATCCCGTTGGGAGGGAAGAGTCCAGCCAGGTTG +
Preference number: 6 (lower is better)
Translates to: MGTVCTGIGCHEMFG*KRCIPLGGKSPARL
Trigger: CAACCTGGCTGGACTCTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
ENST00000672166.1
ENST00000672636.2
ENST00000672787.1
ENST00000673184.1
ENST00000673511.1
ENST00000673604.1
CDS GCA 72 bp CCGTGCGTTTGCCTGTCCTCAGTGATGGGCACAGTGTaGACAGGAATAGGCTGCCACGAGATGTTCGGGTTG +
Preference number: 6 (lower is better)
Translates to: PCVCLSSVMGTV*TGIGCHEMFGL
Trigger: CAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGCAAACGCACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529444.7
CDS CCA 72 bp AGAGGGTCTAGAGGGAAGGGGTGGCTTCAAGCCCCATaGGGTTTAGGCCCTGTTGCTTTCCAGGTTCACGCT +
Preference number: 6 (lower is better)
Translates to: RGSRGKGWLQAP*GLGPVAFQVHA
Trigger: AGCGTGAACCTGGAAAGCAACAGGGCCTAAACCCCATGGGGCTTGAAGCCACCCCTTCCCTCTAGACCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673184.1
CDS CAA 72 bp GTGTGCACAGGAATAGGCTGCCACGAGATGTTCGGGTaGAAGCGCTGCATCCCGTTGGGAGGGAAGAGTCCA +
Preference number: 6 (lower is better)
Translates to: VCTGIGCHEMFG*KRCIPLGGKSP
Trigger: TGGACTCTTCCCTCCCAACGGGATGCAGCGCTTCAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000529444.7
ENST00000533929.7
ENST00000672073.1
ENST00000672075.1
ENST00000672166.1
ENST00000672636.2
ENST00000672787.1
ENST00000673184.1
ENST00000673511.1
ENST00000673604.1
CDS GCA 72 bp GCCACTCTTACCCTGTCCTCAGTGATGGGCACAGTGTaGACAGGAATAGGCTGCCACGAGATGTTCGGGTTG +
Preference number: 6 (lower is better)
Translates to: ATLTLSSVMGTV*TGIGCHEMFGL
Trigger: CAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGGTAAGAGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672166.1
CDS GCA 72 bp AGGGCAAAAGATGAGGGCAGCATACCTTGTTCCCCTTaGCTCTGGAGCTCCCAACCTTACCTCTTGCCGGTG +
Preference number: 6 (lower is better)
Translates to: RAKDEGSIPCSP*LWSSQPYLLPV
Trigger: CACCGGCAAGAGGTAAGGTTGGGAGCTCCAGAGGCAAGGGGAACAAGGTATGCTGCCCTCATCTTTTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673562.1
CDS GCA 72 bp AACTTCAGCAGCCTGTCCTCAGTGATGGGCACAGTGTaGACAGGAATAGGCTGCCACGAGATGTTCGGGTTG +
Preference number: 6 (lower is better)
Translates to: NFSSLSSVMGTV*TGIGCHEMFGL
Trigger: CAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGCTGCTGAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
ENST00000672636.2
ENST00000673184.1
CDS CAA 72 bp ACGGTCTCCAGTGTCAGGTCTGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAATTGCCTGTCCTCAGTG +
Preference number: 6 (lower is better)
Translates to: TVSSVRSVSPVS*ATMSRNCLSSV
Trigger: CACTGAGGACAGGCAATTTCTGGACATGGTGGCCAACGAGACAGGGCTTACAGACCTGACACTGGAGACCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673604.1
CDS CAA 90 bp ACATTCCAGACGGTCTCCAGTGTCAGGTCTGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAATTGCCTGTCCTCAGTGATGGGCACA +
Preference number: 6 (lower is better)
Translates to: TFQTVSSVRSVSPVS*ATMSRNCLSSVMGT
Trigger: TGTGCCCATCACTGAGGACAGGCAATTTCTGGACATGGTGGCCAACGAGACAGGGCTTACAGACCTGACACTGGAGACCGTCTGGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673604.1
CDS TCA 72 bp TTCCTGATAGGGGTCCTTGGGATATGTCTTCACTGGTaGACGGTCTCCATGGCGGTACAGCCCGACGTATTC +
Preference number: 6 (lower is better)
Translates to: FLIGVLGICLHW*TVSMAVQPDVF
Trigger: GAATACGTCGGGCTGTACCGCCATGGAGACCGTTCACCAGTGAAGACATATCCCAAGGACCCCTATCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533929.7
CDS GCA 72 bp TCCAGAAATTGCCTGTCCTCAGTGATGGGCACAGTGTaGACAGGAATAGGCTGCCACGAGATGTTCGGGTTG +
Preference number: 6 (lower is better)
Translates to: SRNCLSSVMGTV*TGIGCHEMFGL
Trigger: CAACCCGAACATCTCGTGGCAGCCTATTCCTGTGCACACTGTGCCCATCACTGAGGACAGGCAATTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673604.1
CDS CCA 72 bp AAAGATGAGGGCAGCATACCTTGTTCCCCTTGCCTCTaGAGCTCCCAACCTTACCTCTTGCCGGTGATAAGA +
Preference number: 6 (lower is better)
Translates to: KDEGSIPCSPCL*SSQPYLLPVIR
Trigger: TCTTATCACCGGCAAGAGGTAAGGTTGGGAGCTCCAGAGGCAAGGGGAACAAGGTATGCTGCCCTCATCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673562.1
CDS CAA 72 bp ACGGTCTCCAGTGTCAGGTCTGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAATTGTGCATTCCGAGAA +
Preference number: 6 (lower is better)
Translates to: TVSSVRSVSPVS*ATMSRNCAFRE
Trigger: TTCTCGGAATGCACAATTTCTGGACATGGTGGCCAACGAGACAGGGCTTACAGACCTGACACTGGAGACCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
ENST00000672351.1
ENST00000672636.2
ENST00000673184.1
CDS CAA 90 bp ACATTCCAGACGGTCTCCAGTGTCAGGTCTGTAAGCCCTGTCTCGTaGGCCACCATGTCCAGAAATTGTGCATTCCGAGAACTCTCATTC +
Preference number: 6 (lower is better)
Translates to: TFQTVSSVRSVSPVS*ATMSRNCAFRELSF
Trigger: GAATGAGAGTTCTCGGAATGCACAATTTCTGGACATGGTGGCCAACGAGACAGGGCTTACAGACCTGACACTGGAGACCGTCTGGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
ENST00000672351.1
ENST00000672636.2
ENST00000673184.1
CDS TCA 72 bp TTCCTGATAGGGGTCCTTGGGATATGTCTTCACTGGTaGACGGTCTCCATGGCGGTACAGCAAGGTAACGAA +
Preference number: 6 (lower is better)
Translates to: FLIGVLGICLHW*TVSMAVQQGNE
Trigger: TTCGTTACCTTGCTGTACCGCCATGGAGACCGTTCACCAGTGAAGACATATCCCAAGGACCCCTATCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000256997.9
ENST00000529444.7
ENST00000672073.1
ENST00000672075.1
ENST00000672166.1
ENST00000672636.2
ENST00000672787.1
ENST00000673184.1
ENST00000673511.1
ENST00000673562.1
ENST00000673604.1
CDS GCA 72 bp GTAGTTGTGACCAAAAATACAAGAAGGAGGCCAAAGTaGCCAGCCTCAGCCTTAGGCTCCCTGAGGGCAAAA +
Preference number: 6 (lower is better)
Translates to: VVVTKNTRRRPK*PASALGSLRAK
Trigger: TTTTGCCCTCAGGGAGCCTAAGGCTGAGGCTGGGCACTTTGGCCTCCTTCTTGTATTTTTGGTCACAACTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673562.1
CDS GCA 72 bp CACTTTGCCAGGCCCGCCCTTAAGTCCGAATTTGGATaGTTAATCAAATTTGCCTCATCCCAGCCAAGCAGG +
Preference number: 6 (lower is better)
Translates to: HFARPALKSEFG*LIKFASSQPSR
Trigger: CCTGCTTGGCTGGGATGAGGCAAATTTGATTAAGCATCCAAATTCGGACTTAAGGGCGGGCCTGGCAAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673562.1
CDS TCA 72 bp ATGTCCAGAAATTGTGCATTCCGAGAACTCTCATTCTaGTACTCTGGTGTCTGCCGGGTCTCGTTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: MSRNCAFRELSF*YSGVCRVSFCS
Trigger: GCTGCAGAACGAGACCCGGCAGACACCAGAGTATCAGAATGAGAGTTCTCGGAATGCACAATTTCTGGACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
ENST00000672351.1
ENST00000672636.2
ENST00000673184.1
CDS CCA 72 bp AAATTGTGCATTCCGAGAACTCTCATTCTGATACTCTaGTGTCTGCCGGGTCTCGTTCTGCAGCTGCTCATA +
Preference number: 6 (lower is better)
Translates to: KLCIPRTLILIL*CLPGLVLQLLI
Trigger: TATGAGCAGCTGCAGAACGAGACCCGGCAGACACCAGAGTATCAGAATGAGAGTTCTCGGAATGCACAATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000256997.9
ENST00000527256.7
ENST00000533929.7
ENST00000672073.1
ENST00000672351.1
ENST00000672636.2
ENST00000673184.1
CDS TCA 72 bp TGCACAGCAATATCATGGGCACAGAGATTAAGGTTATaGAATCTGGTCAAAGTCAGCACCCATATGGGAAAA +
Preference number: 6 (lower is better)
Translates to: CTAISWAQRLRL*NLVKVSTHMGK
Trigger: TTTTCCCATATGGGTGCTGACTTTGACCAGATTTCATAACCTTAATCTCTGTGCCCATGATATTGCTGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673184.1