RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ACBD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000181513

Ensembl transcript IDs: ENST00000321854.13, ENST00000376955.8, ENST00000398322.7, ENST00000431281.5, ENST00000585553.5, ENST00000586279.1, ENST00000586346.5, ENST00000587111.5, ENST00000587976.5, ENST00000589752.5, ENST00000589798.5, ENST00000590289.5, ENST00000591136.1, ENST00000591859.5, ENST00000592162.5, ENST00000619916.4

Found 557 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTCCCTGGGTGAATGGGACTCTGGGCTTGGGGGTGCCGGTTCCTTaGGGAGGCAGGGAGGCTCTGAAACAGCCCCAACATCTCCATTCA +
Preference number: 1 (lower is better)
Translates to: GPWVNGTLGLGVPVP*GGREALKQPQHLHS
Trigger: TGAATGGAGATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTCCCCAAGGAACCGGCACCCCCAAGCCCAGAGTCCCATTCACCCAGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589798.5
3UTR CCA 90 bp CACAACCTGCTCTTTCCAACCTGTGACCCTTCTCAGGAAGGTCTCTaGGGGCCTCGGCATGTCAGGGATCACCTGGTACAGGGGCTCGAA +
Preference number: 1 (lower is better)
Translates to: HNLLFPTCDPSQEGL*GPRHVRDHLVQGLE
Trigger: TTCGAGCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGAAGGGTCACAGGTTGGAAAGAGCAGGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589798.5
3UTR GCA 90 bp AGGGATCACCTGGTACAGGGGCTCGAAGTAACCAAACATGTCCTCTaGCACCTCACCCAGGGGCACTGTGTCGATCACCTTCTGTGCCAC +
Preference number: 1 (lower is better)
Translates to: RDHLVQGLEVTKHVL*HLTQGHCVDHLLCH
Trigger: GTGGCACAGAAGGTGATCGACACAGTGCCCCTGGGTGAGGTGGCAGAGGACATGTTTGGTTACTTCGAGCCCCTGTACCAGGTGATCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589798.5
3UTR-3UTR GCA 90 bp CTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCGGGTGGGGTCTTATTTaGCCCCCGCGCTGCTTTAGG +
Preference number: 2 (lower is better)
Translates to: LPPAASQPIILPGPGPSPGWGLI*PPRCFR
Trigger: CCTAAAGCAGCGCGGGGGGCAAATAAGACCCCACCC...GGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
3UTR-3UTR GCA 90 bp GCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCGGGTGGGGTCTTATTTaGCCCCCGCGCTGCTTTAGG +
Preference number: 2 (lower is better)
Translates to: ASLPRPPSQSFFQAPAQVGWGLI*PPRCFR
Trigger: CCTAAAGCAGCGCGGGGGGCAAATAAGACCCCACCC...GACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
3UTR-3UTR TCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAAAGGAAGCGTCCCTGTaGAGCTGCAGGGAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGKEASL*SCREGW
Trigger: CCACCCCTCCCTGCAGCTTCACAGGGACGCTTCCTT...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
3UTR-3UTR TCA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGAAGGAAGCGTCCCTGTaGAGCTGCAGGGAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGKEASL*SCREGW
Trigger: CCACCCCTCCCTGCAGCTTCACAGGGACGCTTCCTT...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
3UTR-3UTR TCA 90 bp TCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTAAGGAAGCGTCCCTGTaGAGCTGCAGGGAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: SRGLPANHSSRPRPKSQLKEASL*SCREGW
Trigger: CCACCCCTCCCTGCAGCTTCACAGGGACGCTTCCTT...AAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
3UTR-3UTR GCA 90 bp GTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGAGGGGGCCCCCTCCCCCGGGGCCTaGTCACTCCTCCCAACTGGT +
Preference number: 2 (lower is better)
Translates to: VSESSMKTSRVCVGAEGAPSPGA*SLLPTG
Trigger: ACCAGTTGGGAGGAGTGAGCAGGCCCCGGGGGAGGG...GGCCCCCTCCGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 24 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
3UTR-3UTR CCA 90 bp GCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCAAGATAGTCTCAGTTaGCTGCAGAGACCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: ASLPRPPSQSFFQAPAQVQDSLS*LQRPLH
Trigger: GTGGAGGGGTCTCTGCAGCCAACTGAGACTATCTTG...GACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321854.13
ENST00000398322.7
3UTR-3UTR GCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGATAGTCTCAGTTGGCTaGAGAGACCCCTCCACTGAC +
Preference number: 2 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWIVSVG*RDPSTD
Trigger: GTCAGTGGAGGGGTCTCTGCAGCCAACTGAGACTAT...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321854.13
ENST00000398322.7
3UTR-3UTR CCA 90 bp GTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGAGGGGGCCCTCACTCCTCCCAACTaGTCCGGGCCTCCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: VSESSMKTSRVCVGAEGALTPPN*SGPPGL
Trigger: GAGGCCAGGAGGCCCGGACCAGTTGGGAGGAGTGAG...GGCCCCCTCCGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
3UTR-3UTR GCA 90 bp GGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGGGTGGGGTCTTATTTaGCCCCCGCGCTGCTTTAGG +
Preference number: 2 (lower is better)
Translates to: GLPANHSSRPRPKSQLAQGWGLI*PPRCFR
Trigger: CCTAAAGCAGCGCGGGGGGCAAATAAGACCCCACCC...TTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
3UTR-3UTR GCA 90 bp AAGGTCTCTGGGGGCCTCGGCATGTCAGGGATCACCTGGTACAGGGGCTCGAAGACCAAACATGTCCTCTaGCACCTCACCCAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: KVSGGLGMSGITWYRGSKTKHVL*HLTQGH
Trigger: GTGCCCCTGGGTGAGGTGGCAGAGGACATGTTTGGT...CTTCGAGCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAGACCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589798.5
3UTR-3UTR TCA 90 bp CCTCGGAGTCCAGGTCCCTGGGTGAATGGGACTCTGGGCTTGGGGGTGCCGGTTCCAGTTTCATTTCAGTaGTGTAGGCAGACATGGCCT +
Preference number: 2 (lower is better)
Translates to: PRSPGPWVNGTLGLGVPVPVSFQ*CRQTWP
Trigger: AGGCCATGTCTGCCTACATCACTGAAATGAAACTGG...AACCGGCACCCCCAAGCCCAGAGTCCCATTCACCCAGGGACCTGGACTCCGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589798.5
3UTR-3UTR GCA 90 bp TTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAATAGTCTCAGTTGGCTaGAGAGACCCCTCCACTGAC +
Preference number: 2 (lower is better)
Translates to: FQAPAQVPTCSRAQPPRGIVSVG*RDPSTD
Trigger: GTCAGTGGAGGGGTCTCTGCAGCCAACTGAGACTAT...TCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321854.13
ENST00000398322.7
3UTR-3UTR GCA 90 bp TCGGAGTCCAGGTCCCTGGGTGAATGGGACTCTGGGCTTGGGGGTGCCGGTTCCGTCGATCACCTTCTGTaGCACCAGTTTCATTTCAGT +
Preference number: 2 (lower is better)
Translates to: SESRSLGEWDSGLGGAGSVDHLL*HQFHFS
Trigger: ACTGAAATGAAACTGGTGGCACAGAAGGTGATCGAC...GGAACCGGCACCCCCAAGCCCAGAGTCCCATTCACCCAGGGACCTGGACTCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589798.5
3UTR-3UTR TCA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGAAGGAAGCGTCCCTGTaGAGCTGCAGGGAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: HSFVSESSMKTSRVCVGAKEASL*SCREGW
Trigger: CCACCCCTCCCTGCAGCTTCACAGGGACGCTTCCTT...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
3UTR CAA 90 bp TTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTaGAATGCTGTTCTTCTAAACCCTAGGAAGGCTCAGGGCACAGCA +
Preference number: 2 (lower is better)
Translates to: LGEEVRRQTLTGRGI*NAVLLNPRKAQGTA
Trigger: TGCTGTGCCCTGAGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
3UTR-3UTR CCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATACTGTGGCAGACCGGGTaGGATGGCTCACGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: KIRYERVLNGQSCDCLSILWQTG*DGSRLS
Trigger: TGACAGGCGTGAGCCATCCCACCCGGTCTGCCACAG...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
3UTR-3UTR GCA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGCCCAAGTCCCAACTTaGTCAAGAGCTCAACCTCCT +
Preference number: 2 (lower is better)
Translates to: HSFVSESSMKTSRVCVGAAQVPT*SRAQPP
Trigger: AGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGC...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
3UTR-3UTR CCA 90 bp ACACTGACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTCAAGATAGTCTCAGTTaGCTGCAGAGACCCCTCCAC +
Preference number: 2 (lower is better)
Translates to: TLTGRGILNAVLLNPRKAQDSLS*LQRPLH
Trigger: GTGGAGGGGTCTCTGCAGCCAACTGAGACTATCTTG...AGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321854.13
ENST00000398322.7
3UTR-3UTR TCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGGCGTGGCCAAGATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLAWPRW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATCTTGGCCACGC...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
3UTR CCA 72 bp GTGAATGGGACTCTGGGCTTGGGGGTGCCGGTTCCTTaGGGAGGCAGGGAGGCTCTGAAACAGCCCCAACAT +
Preference number: 3 (lower is better)
Translates to: VNGTLGLGVPVP*GGREALKQPQH
Trigger: ATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTCCCCAAGGAACCGGCACCCCCAAGCCCAGAGTCCCATTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589798.5
3UTR CCA 72 bp CCAGGGAATCACAGAAAACCTCGGAGTCCAGGTCCCTaGGTGAATGGGACTCTGGGCTTGGGGGTGCCGGTT +
Preference number: 3 (lower is better)
Translates to: PGNHRKPRSPGP*VNGTLGLGVPV
Trigger: AACCGGCACCCCCAAGCCCAGAGTCCCATTCACCCAGGGACCTGGACTCCGAGGTTTTCTGTGATTCCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589798.5
3UTR GCA 72 bp CAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTaGTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGG +
Preference number: 3 (lower is better)
Translates to: QSFFQAPAQVPT*SRAQPPRGEAG
Trigger: CCCTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
3UTR CCA 72 bp CTCTTTCCAACCTGTGACCCTTCTCAGGAAGGTCTCTaGGGGCCTCGGCATGTCAGGGATCACCTGGTACAG +
Preference number: 3 (lower is better)
Translates to: LFPTCDPSQEGL*GPRHVRDHLVQ
Trigger: CTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGAAGGGTCACAGGTTGGAAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589798.5
3UTR-3UTR CAA 90 bp CCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGACAGGACGGGGAATTTaGAATGCTGTTCTTCTAAAC +
Preference number: 3 (lower is better)
Translates to: PAASQPIILPGPGPSPNLTGRGI*NAVLLN
Trigger: GTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT...CAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
3UTR-3UTR CAA 90 bp GCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAACAGGACGGGGAATTTaGAATGCTGTTCTTCTAAAC +
Preference number: 3 (lower is better)
Translates to: APAQVPTCSRAQPPRGEATGRGI*NAVLLN
Trigger: GTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT...TGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR GCA 90 bp CTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCCTGGGCTGCGGCCTCTaGTCAGGGGGCCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: LPPAASQPIILPGPGPSPLGCGL*SGGRGM
Trigger: CATGCCCCGGCCCCCTGAGCAGAGGCCGCAGCCCAG...GGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
CDS-3UTR TCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTAGCAGGGGCGAGCGCTaGGGCTCCGGGCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPSRGER*GSGLPG
Trigger: GCCTGGAAGCCCGGAGCCTCAGCGCTCGCCCCTGCT...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000431281.5
CDS-3UTR TCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGCCCGCGGCTTCCTACTaGCCCCGGGGTCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGPAASY*PRGPAG
Trigger: CCCTGCTGGACCCCGGGGTCAGTAGGAAGCCGCGGG...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000586346.5
CDS-3UTR GCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGCCCCGCGGCGCCCACTaGCAGGACACCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGPRGAH*QDTWVL
Trigger: GAGGACCCAGGTGTCCTGGCAGTGGGCGCCGCGGGG...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000586346.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCCCCGCGGCGCCCACTaGCAGGACACCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASPRGAH*QDTWVL
Trigger: GAGGACCCAGGTGTCCTGGCAGTGGGCGCCGCGGGG...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000586346.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGCTGGGCTGCGGCCTCTaGTCAGGGGGCCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWLGCGL*SGGRGM
Trigger: CATGCCCCGGCCCCCTGAGCAGAGGCCGCAGCCCAG...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR GCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGCTGGGCTGCGGCCTCTaGTCAGGGGGCCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGLGCGL*SGGRGM
Trigger: CATGCCCCGGCCCCCTGAGCAGAGGCCGCAGCCCAG...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CCTGGCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAGGGGTGCCGGTTCCTTaGGGAGGCAGGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGLPPAASQPIILPGPGPGVPVP*GGREAL
Trigger: CAGAGCCTCCCTGCCTCCCCAAGGAACCGGCACCCC...TGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGCCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCTTCCCAGCCCGGGATaGCCAAGGCGGGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPLPSPG*PRRAAA
Trigger: CGCTGCCGCCCGCCTTGGCCATCCCGGGCTGGGAAG...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGCTTCCCAGCCCGGGATaGCCAAGGCGGGCGGCAGCG +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWLPSPG*PRRAAA
Trigger: CGCTGCCGCCCGCCTTGGCCATCCCGGGCTGGGAAG...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR GCA 90 bp CCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACAGGGGGCCGGGGCATaGTCTCCAGGCTCTGCACCC +
Preference number: 4 (lower is better)
Translates to: PSRGLPANHSSRPRPKSQQGAGA*SPGSAP
Trigger: GGGTGCAGAGCCTGGAGAGCATGCCCCGGCCCCCTG...TTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
CDS-3UTR GCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCAGGGGGCCGGGGCATaGTCTCCAGGCTCTGCACCC +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPQGAGA*SPGSAP
Trigger: GGGTGCAGAGCCTGGAGAGCATGCCCCGGCCCCCTG...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGGTCAGGGTCGCCAGGTaGCGAGGCAGGTGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWVRVAR*RGRWRG
Trigger: CCCTCGCCACCTGCCTCGCCACCTGGCGACCCTGAC...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGGTCAGGGTCGCCAGGTaGCGAGGCAGGTGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGVRVAR*RGRWRG
Trigger: CCCTCGCCACCTGCCTCGCCACCTGGCGACCCTGAC...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCGCCGAGCACTGGGCCTaGGCTGCGGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASAEHWA*AAASAQ
Trigger: CTGAGCAGAGGCCGCAGCCCAGGCCCAGTGCTCGGC...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCGCCATGGCCGAGCACTaGGCCTGGGCTGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASAMAEH*AWAAAS
Trigger: AGAGGCCGCAGCCCAGGCCCAGTGCTCGGCCATGGC...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGGCCATGGCCGAGCACTaGGCCTGGGCTGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGAMAEH*AWAAAS
Trigger: AGAGGCCGCAGCCCAGGCCCAGTGCTCGGCCATGGC...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCGTCCCGAGTGTGTGTaGGGGCGGAGGGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PAASQPIILPGPGPSPNLRPECV*GRRGPA
Trigger: TGCCGGCCCCCTCCGCCCCCACACACACTCGGGACG...CAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCCCCGCGGCGCCCACTaGCAGGACACCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RGLPANHSSRPRPKSQLAPRGAH*QDTWVL
Trigger: GAGGACCCAGGTGTCCTGGCAGTGGGCGCCGCGGGG...AGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTTCTCGGTGCCCATGCTaGTGCGAGCCCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPSRCPC*CEPWGP
Trigger: AGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGA...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCTGGGCTGCGGCCTCTaGTCAGGGGGCCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: RGLPANHSSRPRPKSQLALGCGL*SGGRGM
Trigger: CATGCCCCGGCCCCCTGAGCAGAGGCCGCAGCCCAG...AGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAAAGGTGGCGAGGCAGGTaGCGAGGGCCTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PSRGLPANHSSRPRPKSQRWRGR*RGPQCQ
Trigger: CTGGCACTGAGGCCCTCGCCACCTGCCTCGCCACCT...TTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGTCAGGGTCGCCAGGTaGCGAGGCAGGTGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGVRVAR*RGRWRG
Trigger: CCCTCGCCACCTGCCTCGCCACCTGGCGACCCTGAC...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGGGGGTGCCGGTTCCTTaGGGAGGCAGGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGGVPVP*GGREAL
Trigger: CAGAGCCTCCCTGCCTCCCCAAGGAACCGGCACCCC...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
69% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCTGGCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAGAGGCAGGGAGGCTCTaGAACAGCCCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: PGLPPAASQPIILPGPGPEAGRL*NSPNIS
Trigger: GGAGATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTC...TGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCAAGGAAGCGTCCCTGTaGAGCTGCAGGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PPSRGLPANHSSRPRPKSKEASL*SCREGW
Trigger: CCACCCCTCCCTGCAGCTTCACAGGGACGCTTCCTT...GGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCTGGCGAGGGCCTCAGTaGCAGATGTGTCCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: ASLPRPPSQSFFQAPAQVWRGPQ*QMCPSP
Trigger: TGGGGACGGACACATCTGGCACTGAGGCCCTCGCCA...GACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGATCTCGGTGCCCATGCTaGTGCGAGCCCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGSRCPC*CEPWGP
Trigger: AGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGA...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCACTGGGCTGCGGCCTCTaGTCAGGGGGCCGGGGCATG +
Preference number: 4 (lower is better)
Translates to: APAQVPTCSRAQPPRGEALGCGL*SGGRGM
Trigger: CATGCCCCGGCCCCCTGAGCAGAGGCCGCAGCCCAG...TGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
CDS-3UTR GCA 90 bp CCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCCCTCCCCCGGGGCCTaGTCACTCCTCCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: PAASQPIILPGPGPSPNLPSPGA*SLLPTG
Trigger: ACCAGTTGGGAGGAGTGAGCAGGCCCCGGGGGAGGG...CAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCGGAAAGCGAGCAAACTaGGCTCATCCCCCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: LPPAASQPIILPGPGPSPGKRAN*AHPPPP
Trigger: CGGGGGAGGGGGATGAGCGCAGTTTGCTCGCTTTCC...GGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGAGCTGGGCTTGGGGGTaGCGGTTCCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWSWAWG*RFLGEA
Trigger: TGCCTCCCCAAGGAACCGGCACCCCCAAGCCCAGCT...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAAGGTGGCGAGGCAGGTaGCGAGGGCCTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPRWRGR*RGPQCQ
Trigger: CTGGCACTGAGGCCCTCGCCACCTGCCTCGCCACCT...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCTGGCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCATCTCAGGAAGGTCTCTaGGGGCCTCGGCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: PGLPPAASQPIILPGPGPSQEGL*GPRHVR
Trigger: CCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGA...TGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGGGGTGCCGGTTCCTTaGGGAGGCAGGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGGVPVP*GGREAL
Trigger: CAGAGCCTCCCTGCCTCCCCAAGGAACCGGCACCCC...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCATGGGACTCTGGGCTTaGGGGTGCCGGTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PPSRGLPANHSSRPRPKSMGLWA*GCRFLG
Trigger: CCCAAGGAACCGGCACCCCCAAGCCCAGAGTCCCAT...GGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp CCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCGGAGTCCAGGTCCCTaGGTGAATGGGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PPSRGLPANHSSRPRPKSRSPGP*VNGTLG
Trigger: GCCCAGAGTCCCATTCACCCAGGGACCTGGACTCCG...GGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp CCTGGCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAGCACGGGGCTGTTCCTaGGATCACGCTTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PGLPPAASQPIILPGPGPARGCS*DHAFLQ
Trigger: CTGGAGGAAAGCGTGATCCCAGGAACAGCCCCGTGC...TGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCTCACTCCTCCCAACTaGTCCGGGCCTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASLTPPN*SGPPGL
Trigger: GAGGCCAGGAGGCCCGGACCAGTTGGGAGGAGTGAG...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGCGTCCCGAGTGTGTGTaGGGGCGGAGGGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: PRPKSQLAQELNLLGEKQRPECV*GRRGPA
Trigger: TGCCGGCCCCCTCCGCCCCCACACACACTCGGGACG...CTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTTGCCCAGAGGGAAGCTaGGCTTGGGGGTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPCPEGS*AWGCRF
Trigger: GAACCGGCACCCCCAAGCCCAGCTTCCCTCTGGGCA...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR TCA 90 bp CCTGGCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCATCCGCATCTGTTCGCTaGTATCCAGGCCTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: PGLPPAASQPIILPGPGPSASVR*YPGLAD
Trigger: ATCGGCCAGGCCTGGATATCAGCGAACAGATGCGGA...TGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR TCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGGTCCAGGTCCCTGGGTaGATGGGACTCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWVQVPG*MGLCGG
Trigger: CCCTCCACAGAGTCCCATTCACCCAGGGACCTGGAC...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR GCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGTGGCGAGGGCCTCAGTaGCAGATGTGTCCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGWRGPQ*QMCPSP
Trigger: TGGGGACGGACACATCTGGCACTGAGGCCCTCGCCA...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCACTTTCTCGGTGCCCATaGTGCTGCGAGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPLSRCP*CCEPWG
Trigger: GCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAG...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCTGGGCTTGGGGGTaGCGGTTCCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PAASQPIILPGPGPSPNLLWAWG*RFLGEA
Trigger: TGCCTCCCCAAGGAACCGGCACCCCCAAGCCCAGAG...CAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR GCA 90 bp CCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAAATGCTCTCCAGGCTCTaGACCCTCGCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: PSRGLPANHSSRPRPKSQMLSRL*TLACTS
Trigger: GGAGGTGCAGGCGAGGGTGCAGAGCCTGGAGAGCAT...TTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
CDS-3UTR GCA 90 bp TCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGCCCTCCCCCGGGGCCTaGTCACTCCTCCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: SRPRPKSQLAQELNLLGEPSPGA*SLLPTG
Trigger: ACCAGTTGGGAGGAGTGAGCAGGCCCCGGGGGAGGG...CTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTCCCTCCCCCGGGGCCTaGTCACTCCTCCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: SRGLPANHSSRPRPKSQLPSPGA*SLLPTG
Trigger: ACCAGTTGGGAGGAGTGAGCAGGCCCCGGGGGAGGG...AAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTGGAAAGCGAGCAAACTaGGCTCATCCCCCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPGKRAN*AHPPPP
Trigger: CGGGGGAGGGGGATGAGCGCAGTTTGCTCGCTTTCC...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAAGCTGGGCTTGGGGGTaGCGGTTCCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGSWAWG*RFLGEA
Trigger: TGCCTCCCCAAGGAACCGGCACCCCCAAGCCCAGCT...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCACTGCCAGGACACCTaGGTCCTCTCTCGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASHCQDT*VLSRHH
Trigger: GTGGTGGCGAGAGAGGACCCAGGTGTCCTGGCAGTG...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000586346.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAAACAGTCTCCCACCCTaGCCGCCTGCACCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGNSLPP*PPAPWP
Trigger: GGGCCAAGGTGCAGGCGGCCAGGGTGGGAGACTGTT...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000586346.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGTCAGGGTCGCCAGGTaGCGAGGCAGGTGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: FQAPAQVPTCSRAQPPRGVRVAR*RGRWRG
Trigger: CCCTCGCCACCTGCCTCGCCACCTGGCGACCCTGAC...TCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCGCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGACTCTCAAGGCAGTGTaGTGGGGTCAGGGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: PAPESRPTQHRGRVPQLQTLKAV*WGQGRQ
Trigger: CTGGCGACCCTGACCCCACCACACTGCCTTGAGAGT...CTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCTGCTGCTGCGAGCCCTaGGGCCCTACTTTTGAGCGA +
Preference number: 4 (lower is better)
Translates to: LPPAASQPIILPGPGPSPCCCEP*GPTFER
Trigger: TCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCA...GGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCGCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCTGGCAGTCGGGCTCTaGGCTTTCTTTCTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: PAPESRPTQHRGRVPQLQLAVGL*AFFLGA
Trigger: GGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAG...CTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCTGGCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAGGCAGGGCCCCATGGTaGCCTGCTTGTAGTAACTGT +
Preference number: 4 (lower is better)
Translates to: PGLPPAASQPIILPGPGPGRAPW*PACSNC
Trigger: ACAGTTACTACAAGCAGGCCACCATGGGGCCCTGCC...TGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAGGCAGGGCCCCATaGTGGCCTGCTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: ASLPRPPSQSFFQAPAQVPGRAP*WPACSN
Trigger: GTTACTACAAGCAGGCCACCATGGGGCCCTGCCTGG...GACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGGCCGAGCACTGGGCCTaGGCTGCGGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PAQVPTCSRAQPPRGEAGAEHWA*AAASAQ
Trigger: CTGAGCAGAGGCCGCAGCCCAGGCCCAGTGCTCGGC...CCCTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCCGAGCACTGGGCCTaGGCTGCGGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QAPAQVPTCSRAQPPRGEAEHWA*AAASAQ
Trigger: CTGAGCAGAGGCCGCAGCCCAGGCCCAGTGCTCGGC...TTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCCATGGCCGAGCACTaGGCCTGGGCTGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QAPAQVPTCSRAQPPRGEAMAEH*AWAAAS
Trigger: AGAGGCCGCAGCCCAGGCCCAGTGCTCGGCCATGGC...TTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCGCTGATATCCAGGCCTaGCCGATCCGAGGCAACCCA +
Preference number: 4 (lower is better)
Translates to: PPSRGLPANHSSRPRPKSADIQA*PIRGNP
Trigger: TGGGTTGCCTCGGATCGGCCAGGCCTGGATATCAGC...GGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCATAGTGAAAGGTCGTaGCGTCCTAGCGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPSRGLPANHSSRPRPKSHSERS*RPSAPW
Trigger: CCAGGGGGCGCTAGGACGCCACGACCTTTCACTATG...GGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGTGCCCAGAGGGAAGCTaGGCTTGGGGGTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGCPEGS*AWGCRF
Trigger: GAACCGGCACCCCCAAGCCCAGCTTCCCTCTGGGCA...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR TCA 90 bp CCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAATGGGCAGGTTCTGGATaGCGCTCACTGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PSRGLPANHSSRPRPKSQWAGSG*RSLQPG
Trigger: TCCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCA...TTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTGAGGCAGGGAGGCTCTaGAACAGCCCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPEAGRL*NSPNIS
Trigger: GGAGATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTC...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGGAGGCAGGGAGGCTCTaGAACAGCCCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGEAGRL*NSPNIS
Trigger: GGAGATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTC...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGGAGGCAGGGAGGCTCTaGAACAGCCCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWEAGRL*NSPNIS
Trigger: GGAGATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTC...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGTGGCGAGGGCCTCAGTaGCAGATGTGTCCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PAASQPIILPGPGPSPNLWRGPQ*QMCPSP
Trigger: TGGGGACGGACACATCTGGCACTGAGGCCCTCGCCA...CAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGATGGCGAGGGCCTCAGTaGCAGATGTGTCCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGWRGPQ*QMCPSP
Trigger: TGGGGACGGACACATCTGGCACTGAGGCCCTCGCCA...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGATCTCGGTGCCCATGCTaGTGCGAGCCCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: FQAPAQVPTCSRAQPPRGSRCPC*CEPWGP
Trigger: AGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGA...TCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAATCTCGGTGCCCATGCTaGTGCGAGCCCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: QAPAQVPTCSRAQPPRGESRCPC*CEPWGP
Trigger: AGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGA...TTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTGGCTTTCTTTCTCGGTaGCCATGCTGCTGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPGFLSR*PCCCEP
Trigger: GGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCC...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCCGCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCTGCTCATCTTaGCCAGACTGTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: PAPESRPTQHRGRVPQLQPPCSS*PDCSRR
Trigger: ACGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGG...CTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCTCTGGGCTTGGGGGTaGCGGTTCCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RGLPANHSSRPRPKSQLALWAWG*RFLGEA
Trigger: TGCCTCCCCAAGGAACCGGCACCCCCAAGCCCAGAG...AGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR GCA 90 bp CCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCACGCTTTCCTCCAGATaGTGCCCGCTGCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PPSRGLPANHSSRPRPKSTLSSR*CPLLCP
Trigger: TGGACAGAGCAGCGGGCAGCATCTGGAGGAAAGCGT...GGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCACTCTGCACCCTCGCCTaGACCTCCTGCATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPLCTLA*TSCMLS
Trigger: GGAGAGCATGCAGGAGGTGCAGGCGAGGGTGCAGAG...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR GCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAATGCTCTCCAGGCTCTaGACCCTCGCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGMLSRL*TLACTS
Trigger: GGAGGTGCAGGCGAGGGTGCAGAGCCTGGAGAGCAT...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR GCA 90 bp GCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGCAGGGGGCCGGGGCATaGTCTCCAGGCTCTGCACCC +
Preference number: 4 (lower is better)
Translates to: ASQPIILPGPGPSPNLLKQGAGA*SPGSAP
Trigger: GGGTGCAGAGCCTGGAGAGCATGCCCCGGCCCCCTG...CTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
CDS-3UTR GCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGGGGTGGGGTCTTATTTaGCCCCCGCGCTGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGGWGLI*PPRCFR
Trigger: CCTAAAGCAGCGCGGGGGGCAAATAAGACCCCACCC...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGGGGTGGGGTCTTATTTaGCCCCCGCGCTGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWGWGLI*PPRCFR
Trigger: CCTAAAGCAGCGCGGGGGGCAAATAAGACCCCACCC...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCACACTGCCAGGACACCTaGGTCCTCTCTCGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPHCQDT*VLSRHH
Trigger: GTGGTGGCGAGAGAGGACCCAGGTGTCCTGGCAGTG...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000586346.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAACAGTCTCCCACCCTaGCCGCCTGCACCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LPGPGPSPNLLKSSTSSGNSLPP*PPAPWP
Trigger: GGGCCAAGGTGCAGGCGGCCAGGGTGGGAGACTGTT...CCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGAGGTGGCGAGGCAGGTaGCGAGGGCCTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PRPKSQLAQELNLLGEKQRWRGR*RGPQCQ
Trigger: CTGGCACTGAGGCCCTCGCCACCTGCCTCGCCACCT...CTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAAGGTGGCGAGGCAGGTaGCGAGGGCCTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: APAQVPTCSRAQPPRGEARWRGR*RGPQCQ
Trigger: CTGGCACTGAGGCCCTCGCCACCTGCCTCGCCACCT...TGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAAGGTGGCGAGGCAGGTaGCGAGGGCCTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: QAPAQVPTCSRAQPPRGERWRGR*RGPQCQ
Trigger: CTGGCACTGAGGCCCTCGCCACCTGCCTCGCCACCT...TTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCACTCTCAAGGCAGTGTaGTGGGGTCAGGGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASTLKAV*WGQGRQ
Trigger: CTGGCGACCCTGACCCCACCACACTGCCTTGAGAGT...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGTGCTGCTGCGAGCCCTaGGGCCCTACTTTTGAGCGA +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWCCCEP*GPTFER
Trigger: TCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCA...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGCTGGCAGTCGGGCTCTaGGCTTTCTTTCTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWLAVGL*AFFLGA
Trigger: GGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAG...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCGCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGGCCTGGAACTGTTTCTaGCAGTCGGGCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PAPESRPTQHRGRVPQLQAWNCF*QSGSGL
Trigger: AAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGC...CTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCGCCTGGAACTGTTTCTaGCAGTCGGGCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: LPPAASQPIILPGPGPSPAWNCF*QSGSGL
Trigger: AAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGC...GGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCTGGCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCATTCTTGGGCAGGTTCTaGATGACGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PGLPPAASQPIILPGPGPFLGRF*MTLTAA
Trigger: GGCTGCAGTGAGCGTCATCCAGAACCTGCCCAAGAA...TGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGCCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCAGGCAGGGCCCCATaGTGGCCTGCTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPPGRAP*WPACSN
Trigger: GTTACTACAAGCAGGCCACCATGGGGCCCTGCCTGG...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGCCAGGCAGGGCCCCATaGTGGCCTGCTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGPGRAP*WPACSN
Trigger: GTTACTACAAGCAGGCCACCATGGGGCCCTGCCTGG...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGGGTGCCGGTTCCTTaGGGAGGCAGGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PRPKSQLAQELNLLGEKQGVPVP*GGREAL
Trigger: CAGAGCCTCCCTGCCTCCCCAAGGAACCGGCACCCC...CTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAATGGGACTCTGGGCTTaGGGGTGCCGGTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPMGLWA*GCRFLG
Trigger: CCCAAGGAACCGGCACCCCCAAGCCCAGAGTCCCAT...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGGCACGGGGCTGTTCCTaGGATCACGCTTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGARGCS*DHAFLQ
Trigger: CTGGAGGAAAGCGTGATCCCAGGAACAGCCCCGTGC...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCGCACGGGGCTGTTCCTaGGATCACGCTTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASARGCS*DHAFLQ
Trigger: CTGGAGGAAAGCGTGATCCCAGGAACAGCCCCGTGC...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGGCCGAGCACTGGGCCTaGGCTGCGGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: ASQPIILPGPGPSPNLLKAEHWA*AAASAQ
Trigger: CTGAGCAGAGGCCGCAGCCCAGGCCCAGTGCTCGGC...CTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCATTCGGAAGAGCCACTaGACGACGAAGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: LPPAASQPIILPGPGPSPIRKSH*TTKGHR
Trigger: CCTGTGGCCCTTCGTCGTCCAGTGGCTCTTCCGAAT...GGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCTCACTCCTCCCAACTaGTCCGGGCCTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RGLPANHSSRPRPKSQLALTPPN*SGPPGL
Trigger: GAGGCCAGGAGGCCCGGACCAGTTGGGAGGAGTGAG...AGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGCTCACTCCTCCCAACTaGTCCGGGCCTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LPGPGPSPNLLKSSTSSGLTPPN*SGPPGL
Trigger: GAGGCCAGGAGGCCCGGACCAGTTGGGAGGAGTGAG...CCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGCCTAGCGCCCCCTGGTaGAAATCCGCATCTGTTCGC +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWPSAPW*KSASVR
Trigger: GCGAACAGATGCGGATTTCCACCAGGGGGCGCTAGG...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR TCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCTGGGGCCCTACTTTTaGGCGACTCTCAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPLGPYF*ATLKAV
Trigger: CACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAG...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGATGGGCAGGTTCTGGATaGCGCTCACTGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGWAGSG*RSLQPG
Trigger: TCCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCA...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCATGGGCAGGTTCTGGATaGCGCTCACTGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPWAGSG*RSLQPG
Trigger: TCCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCA...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCCGCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCAGAGACCCCTCCACTaGCAGTCACCTCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: PAPESRPTQHRGRVPQLQQRPLH*QSPLLG
Trigger: ACCCAAAAGAGGTGACTGTCAGTGGAGGGGTCTCTG...CTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp TCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGGAAGCGTCCCTGTaGAGCTGCAGGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SRPRPKSQLAQELNLLGEKEASL*SCREGW
Trigger: CCACCCCTCCCTGCAGCTTCACAGGGACGCTTCCTT...CTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTTCCGCATCTGTTCGCTaGTATCCAGGCCTGGCCGAT +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPSASVR*YPGLAD
Trigger: ATCGGCCAGGCCTGGATATCAGCGAACAGATGCGGA...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR GCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCGTGTCCGTCCCCAGATaGGCCTCCTTTAGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASVSVPR*ASFRCT
Trigger: TGTGCACCTAAAGGAGGCGCATCTGGGGACGGACAC...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAAGTGTCCGTCCCCAGATaGGCCTCCTTTAGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PSRGLPANHSSRPRPKSQVSVPR*ASFRCT
Trigger: TGTGCACCTAAAGGAGGCGCATCTGGGGACGGACAC...TTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAACTTTCTCGGTGCCCATaGTGCTGCGAGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: QAPAQVPTCSRAQPPRGELSRCP*CCEPWG
Trigger: GCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAG...TTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCCTTTCCTCCAGATGCTaGCCGCTGCTCTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: LPPAASQPIILPGPGPSPLSSRC*PLLCPN
Trigger: GTTTGGACAGAGCAGCGGGCAGCATCTGGAGGAAAG...GGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCTTTCCTCCAGATGCTaGCCGCTGCTCTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PPSRGLPANHSSRPRPKSLSSRC*PLLCPN
Trigger: GTTTGGACAGAGCAGCGGGCAGCATCTGGAGGAAAG...GGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGCTCTGCACCCTCGCCTaGACCTCCTGCATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SRPRPKSQLAQELNLLGELCTLA*TSCMLS
Trigger: GGAGAGCATGCAGGAGGTGCAGGCGAGGGTGCAGAG...CTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
CDS-3UTR GCA 90 bp CCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGGGGTGGGGTCTTATTTaGCCCCCGCGCTGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: PAASQPIILPGPGPSPNLGWGLI*PPRCFR
Trigger: CCTAAAGCAGCGCGGGGGGCAAATAAGACCCCACCC...CAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGCCCTCCCCCGGGGCCTaGTCACTCCTCCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: ASQPIILPGPGPSPNLLKPSPGA*SLLPTG
Trigger: ACCAGTTGGGAGGAGTGAGCAGGCCCCGGGGGAGGG...CTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAAACAGTCTCCCACCCTaGCCGCCTGCACCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: APAQVPTCSRAQPPRGEANSLPP*PPAPWP
Trigger: GGGCCAAGGTGCAGGCGGCCAGGGTGGGAGACTGTT...TGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGACTCTCAAGGCAGTGTaGTGGGGTCAGGGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: PAASQPIILPGPGPSPNLTLKAV*WGQGRQ
Trigger: CTGGCGACCCTGACCCCACCACACTGCCTTGAGAGT...CAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGCTGGCAGTCGGGCTCTaGGCTTTCTTTCTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGLAVGL*AFFLGA
Trigger: GGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAG...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCTTCTTGGGCAGGTTCTaGATGACGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPPAASQPIILPGPGPSPFLGRF*MTLTAA
Trigger: GGCTGCAGTGAGCGTCATCCAGAACCTGCCCAAGAA...GGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGGGCAGGGCCCCATGGTaGCCTGCTTGTAGTAACTGT +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGGRAPW*PACSNC
Trigger: ACAGTTACTACAAGCAGGCCACCATGGGGCCCTGCC...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGGGCAGGGCCCCATGGTaGCCTGCTTGTAGTAACTGT +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWGRAPW*PACSNC
Trigger: ACAGTTACTACAAGCAGGCCACCATGGGGCCCTGCC...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGATCTCAGGAAGGTCTCTaGGGGCCTCGGCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGSQEGL*GPRHVR
Trigger: CCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGA...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGTCTCAGGAAGGTCTCTaGGGGCCTCGGCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGSQEGL*GPRHVR
Trigger: CCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGA...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGGGGTGCCGGTTCCTTaGGGAGGCAGGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GLPANHSSRPRPKSQLAQGVPVP*GGREAL
Trigger: CAGAGCCTCCCTGCCTCCCCAAGGAACCGGCACCCC...TTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGCACGGGGCTGTTCCTaGGATCACGCTTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGARGCS*DHAFLQ
Trigger: CTGGAGGAAAGCGTGATCCCAGGAACAGCCCCGTGC...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCGCCATGGCCGAGCACTaGGCCTGGGCTGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SQPIILPGPGPSPNLLKSAMAEH*AWAAAS
Trigger: AGAGGCCGCAGCCCAGGCCCAGTGCTCGGCCATGGC...GCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGAGGGGGCCGCCATGGCCGAGCACTaGGCCTGGGCTGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VSESSMKTSRVCVGAEGAAMAEH*AWAAAS
Trigger: AGAGGCCGCAGCCCAGGCCCAGTGCTCGGCCATGGC...GGCCCCCTCCGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGACTCACTCCTCCCAACTaGTCCGGGCCTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: FQAPAQVPTCSRAQPPRGLTPPN*SGPPGL
Trigger: GAGGCCAGGAGGCCCGGACCAGTTGGGAGGAGTGAG...TCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGCTCACTCCTCCCAACTaGTCCGGGCCTCCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PAQVPTCSRAQPPRGEAGLTPPN*SGPPGL
Trigger: GAGGCCAGGAGGCCCGGACCAGTTGGGAGGAGTGAG...CCCTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCACCTAGCGCCCCCTGGTaGAAATCCGCATCTGTTCGC +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPPSAPW*KSASVR
Trigger: GCGAACAGATGCGGATTTCCACCAGGGGGCGCTAGG...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp GCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCATGCCCAGAGGGAAGCTaGGCTTGGGGGTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: APAQVPTCSRAQPPRGEACPEGS*AWGCRF
Trigger: GAACCGGCACCCCCAAGCCCAGCTTCCCTCTGGGCA...TGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCAGGTCCCTGGGTGAATaGGACTCTGTGGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASRSLGE*DSVEGL
Trigger: CAACCCCTCCACAGAGTCCCATTCACCCAGGGACCT...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR TCA 90 bp CTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGTGGGCAGGTTCTGGATaGCGCTCACTGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LPGPGPSPNLLKSSTSSGWAGSG*RSLQPG
Trigger: TCCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCA...CCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCGCTCTTTCCAACCTGTaGCCCTTCTCAGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PPSRGLPANHSSRPRPKSALSNL*PFSGRS
Trigger: AGACCTTCCTGAGAAGGGTCACAGGTTGGAAAGAGC...GGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp TCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGAGGCAGGGAGGCTCTaGAACAGCCCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: SRGLPANHSSRPRPKSQLEAGRL*NSPNIS
Trigger: GGAGATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTC...AAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACAGAGACCCCTCCACTaGCAGTCACCTCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: PSRGLPANHSSRPRPKSQQRPLH*QSPLLG
Trigger: ACCCAAAAGAGGTGACTGTCAGTGGAGGGGTCTCTG...TTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp TTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAAAGGAAGCGTCCCTGTaGAGCTGCAGGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: FQAPAQVPTCSRAQPPRGKEASL*SCREGW
Trigger: CCACCCCTCCCTGCAGCTTCACAGGGACGCTTCCTT...TCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGCTGGGGCCCTACTTTTaGGCGACTCTGCAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWLGPYF*ATLQEA
Trigger: TGCTTCTTGCAGAGTCGCTCAAAAGTAGGGCCCCAG...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS-3UTR GCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGTGTCCGTCCCCAGATaGGCCTCCTTTAGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPVSVPR*ASFRCT
Trigger: TGTGCACCTAAAGGAGGCGCATCTGGGGACGGACAC...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGTGGCGAGGGCCTCAGTaGCAGATGTGTCCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: PAQVPTCSRAQPPRGEAGWRGPQ*QMCPSP
Trigger: TGGGGACGGACACATCTGGCACTGAGGCCCTCGCCA...CCCTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCTCGGTGCCCATGCTaGTGCGAGCCCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SQPIILPGPGPSPNLLKSSRCPC*CEPWGP
Trigger: AGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGA...GCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCTCCAGCTGCTCCAGGGAATCACAGAAAACCTCGGAGTCCAGGTCCCTGGGTGCTTTCTCGGTGCCCATaGTGCTGCGAGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: APAAPGNHRKPRSPGPWVLSRCP*CCEPWG
Trigger: GCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAG...CACCCAGGGACCTGGACTCCGAGGTTTTCTGTGATTCCCTGGAGCAGCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR GCA 90 bp CTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGGGCTTTCTTTCTCGGTaGCCATGCTGCTGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: LPGPGPSPNLLKSSTSSGGFLSR*PCCCEP
Trigger: GGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCC...CCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCCTGGATGACGCTCACTaGAGCCTGGAACTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LPPAASQPIILPGPGPSPLDDAH*SLELFL
Trigger: CAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCCAG...GGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCACCTCCCTGCTCATCTTaGCCAGACTGTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPPPCSS*PDCSRR
Trigger: ACGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGG...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAACCAAACATGTCCTCTaGCACCTCACCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGTKHVL*HLTQGH
Trigger: GTGCCCCTGGGTGAGGTGGCAGAGGACATGTTTGGT...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGACCAAACATGTCCTCTaGCACCTCACCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGTKHVL*HLTQGH
Trigger: GTGCCCCTGGGTGAGGTGGCAGAGGACATGTTTGGT...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCTTTCCTCCAGATGCTaGCCGCTGCTCTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPLSSRC*PLLCPN
Trigger: GTTTGGACAGAGCAGCGGGCAGCATCTGGAGGAAAG...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCTTTCCTCCAGATGCTaGCCGCTGCTCTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASLSSRC*PLLCPN
Trigger: GTTTGGACAGAGCAGCGGGCAGCATCTGGAGGAAAG...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAACGCTTTCCTCCAGATaGTGCCCGCTGCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPTLSSR*CPLLCP
Trigger: TGGACAGAGCAGCGGGCAGCATCTGGAGGAAAGCGT...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAACGCTTTCCTCCAGATaGTGCCCGCTGCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGTLSSR*CPLLCP
Trigger: TGGACAGAGCAGCGGGCAGCATCTGGAGGAAAGCGT...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGACGCTTTCCTCCAGATaGTGCCCGCTGCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGTLSSR*CPLLCP
Trigger: TGGACAGAGCAGCGGGCAGCATCTGGAGGAAAGCGT...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAATGCTCTCCAGGCTCTaGACCCTCGCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: APAQVPTCSRAQPPRGEAMLSRL*TLACTS
Trigger: GGAGGTGCAGGCGAGGGTGCAGAGCCTGGAGAGCAT...TGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
CDS-3UTR GCA 90 bp CTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGGGGTGGGGTCTTATTTaGCCCCCGCGCTGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LPGPGPSPNLLKSSTSSGGWGLI*PPRCFR
Trigger: CCTAAAGCAGCGCGGGGGGCAAATAAGACCCCACCC...CCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGGCACTGGGCCTGGGCTaGGGCCTCTTTCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: PAQVPTCSRAQPPRGEAGALGLG*GLFLCG
Trigger: CCCACAAAGAAAGAGGCCGCAGCCCAGGCCCAGTGC...CCCTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592162.5
CDS-3UTR CCA 90 bp TCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCAGGTGGCGAGGCAGGTaGCGAGGGCCTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SQPIILPGPGPSPNLLKSRWRGR*RGPQCQ
Trigger: CTGGCACTGAGGCCCTCGCCACCTGCCTCGCCACCT...GCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGTGCTGCTGCGAGCCCTaGGGCCCTACTTTTGAGCGA +
Preference number: 4 (lower is better)
Translates to: SRPRPKSQLAQELNLLGECCCEP*GPTFER
Trigger: TCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCA...CTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGTGCTGCTGCGAGCCCTaGGGCCCTACTTTTGAGCGA +
Preference number: 4 (lower is better)
Translates to: LPGPGPSPNLLKSSTSSGCCCEP*GPTFER
Trigger: TCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCA...CCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGCCTGGAACTGTTTCTaGCAGTCGGGCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPAWNCF*QSGSGL
Trigger: AAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGC...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGAACTGTTTCTaGCAGTCGGGCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGAWNCF*QSGSGL
Trigger: AAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGC...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGACGCTCACTGCAGCCTaGAACTGTTTCTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWTLTAA*NCFWQS
Trigger: CGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGT...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTACGCTCACTGCAGCCTaGAACTGTTTCTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPTLTAA*NCFWQS
Trigger: CGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGT...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGGCAGGGCCCCATGGTaGCCTGCTTGTAGTAACTGT +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGGRAPW*PACSNC
Trigger: ACAGTTACTACAAGCAGGCCACCATGGGGCCCTGCC...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGCCAGGCAGGGCCCCATaGTGGCCTGCTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: LPGPGPSPNLLKSSTSSGPGRAP*WPACSN
Trigger: GTTACTACAAGCAGGCCACCATGGGGCCCTGCCTGG...CCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGACTTATATCGTCCAATaGGGTCCCAGAACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWTYIVQ*GPRTRA
Trigger: GGCCCGGGTTCTGGGACCCCATTGGACGATATAAGT...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGACTTATATCGTCCAATaGGGTCCCAGAACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGTYIVQ*GPRTRA
Trigger: GGCCCGGGTTCTGGGACCCCATTGGACGATATAAGT...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGTCTCAGGAAGGTCTCTaGGGGCCTCGGCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: SRPRPKSQLAQELNLLGESQEGL*GPRHVR
Trigger: CCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGA...CTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGATGGGACTCTGGGCTTaGGGGTGCCGGTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PRPKSQLAQELNLLGEKQMGLWA*GCRFLG
Trigger: CCCAAGGAACCGGCACCCCCAAGCCCAGAGTCCCAT...CTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp TCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTAGGTCCCTGGGTGAATaGGACTCTGGGCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SRGLPANHSSRPRPKSQLRSLGE*DSGLGG
Trigger: ACCCCCAAGCCCAGAGTCCCATTCACCCAGGGACCT...AAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp CCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGCGGAGTCCAGGTCCCTaGGTGAATGGGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PAQVPTCSRAQPPRGEAGRSPGP*VNGTLG
Trigger: GCCCAGAGTCCCATTCACCCAGGGACCTGGACTCCG...CCCTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp AAGGTCTCTGGGGGCCTCGGCATGTCAGGGATCACCTGGTACAGGGGCTCGAAGCGGAGTCCAGGTCCCTaGGTGAATGGGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KVSGGLGMSGITWYRGSKRSPGP*VNGTLG
Trigger: GCCCAGAGTCCCATTCACCCAGGGACCTGGACTCCG...CTTCGAGCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAGACCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR CCA 90 bp TCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGGCACGGGGCTGTTCCTaGGATCACGCTTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SRPRPKSQLAQELNLLGEARGCS*DHAFLQ
Trigger: CTGGAGGAAAGCGTGATCCCAGGAACAGCCCCGTGC...CTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAATTCGGAAGAGCCACTaGACGACGAAGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPIRKSH*TTKGHR
Trigger: CCTGTGGCCCTTCGTCGTCCAGTGGCTCTTCCGAAT...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTCGTCCCGAGTGTGTGTaGGGGCGGAGGGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFRPECV*GRRGPA
Trigger: TGCCGGCCCCCTCCGCCCCCACACACACTCGGGACG...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGAGGTCCCTGGGTGAATaGGACTCTGTGGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PAASQPIILPGPGPSPNLRSLGE*DSVEGL
Trigger: CAACCCCTCCACAGAGTCCCATTCACCCAGGGACCT...CAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGCGGCCTCTTTCTTTGTaGGGGGCACGGGGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: PAQVPTCSRAQPPRGEAGRPLSL*GARGCS
Trigger: GGAACAGCCCCGTGCCCCCCACAAAGAAAGAGGCCG...CCCTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592162.5
CDS-3UTR TCA 90 bp CCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGTGGGCAGGTTCTGGATaGCGCTCACTGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PRPKSQLAQELNLLGEKQWAGSG*RSLQPG
Trigger: TCCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCA...CTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGGCTCTTTCCAACCTGTaGCCCTTCTCAGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWALSNL*PFSGRS
Trigger: AGACCTTCCTGAGAAGGGTCACAGGTTGGAAAGAGC...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAAGCTCTTTCCAACCTGTaGCCCTTCTCAGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PSRGLPANHSSRPRPKSQALSNL*PFSGRS
Trigger: AGACCTTCCTGAGAAGGGTCACAGGTTGGAAAGAGC...TTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGCAGAGACCCCTCCACTaGCAGTCACCTCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGQRPLH*QSPLLG
Trigger: ACCCAAAAGAGGTGACTGTCAGTGGAGGGGTCTCTG...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp GCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGGTCCAGGTCCCTGGGTaGATGGGACTCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: ASQPIILPGPGPSPNLLKVQVPG*MGLCGG
Trigger: CCCTCCACAGAGTCCCATTCACCCAGGGACCTGGAC...CTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR GCA 90 bp TCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGGTGTCCGTCCCCAGATaGGCCTCCTTTAGGTGCACA +
Preference number: 4 (lower is better)
Translates to: SRPRPKSQLAQELNLLGEVSVPR*ASFRCT
Trigger: TGTGCACCTAAAGGAGGCGCATCTGGGGACGGACAC...CTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCCTTTCTCGGTGCCCATaGTGCTGCGAGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: SQPIILPGPGPSPNLLKSLSRCP*CCEPWG
Trigger: GCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAG...GCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGGCTTTCTTTCTCGGTaGCCATGCTGCTGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: FQAPAQVPTCSRAQPPRGGFLSR*PCCCEP
Trigger: GGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCC...TCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGCTGGATGACGCTCACTaGAGCCTGGAACTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGLDDAH*SLELFL
Trigger: CAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCCAG...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTCCTCCCTGCTCATCTTaGCCAGACTGTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SRGLPANHSSRPRPKSQLPPCSS*PDCSRR
Trigger: ACGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGG...AAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGCCTCCCTGCTCATCTTaGCCAGACTGTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: LPGPGPSPNLLKSSTSSGPPCSS*PDCSRR
Trigger: ACGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGG...CCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGACCAAACATGTCCTCTaGCACCTCACCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LPGPGPSPNLLKSSTSSGTKHVL*HLTQGH
Trigger: GTGCCCCTGGGTGAGGTGGCAGAGGACATGTTTGGT...CCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCAGCTCAGGCTCCAGCTaGTCCAGGGAATCACAGAAA +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASSSGSS*SRESQK
Trigger: TTTCTGTGATTCCCTGGAGCAGCTGGAGCCTGAGCT...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTACGCTTTCCTCCAGATaGTGCCCGCTGCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RGLPANHSSRPRPKSQLATLSSR*CPLLCP
Trigger: TGGACAGAGCAGCGGGCAGCATCTGGAGGAAAGCGT...AGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGATAGTCTCAGTTGGCTaGAGAGACCCCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGIVSVG*RDPSTD
Trigger: GTCAGTGGAGGGGTCTCTGCAGCCAACTGAGACTAT...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTATAGTCTCAGTTGGCTaGAGAGACCCCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPIVSVG*RDPSTD
Trigger: GTCAGTGGAGGGGTCTCTGCAGCCAACTGAGACTAT...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAAGCCCAAGTCCCAACTTaGTCAAGAGCTCAACCTCCT +
Preference number: 4 (lower is better)
Translates to: PSRGLPANHSSRPRPKSQAQVPT*SRAQPP
Trigger: AGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGC...TTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGGAAAGCGAGCAAACTaGGCTCATCCCCCTCCCCCG +
Preference number: 4 (lower is better)
Translates to: GLPANHSSRPRPKSQLAQGKRAN*AHPPPP
Trigger: CGGGGGAGGGGGATGAGCGCAGTTTGCTCGCTTTCC...TTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGAGGGGGCCAGCTGGGCTTGGGGGTaGCGGTTCCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: VSESSMKTSRVCVGAEGASWAWG*RFLGEA
Trigger: TGCCTCCCCAAGGAACCGGCACCCCCAAGCCCAGCT...GGCCCCCTCCGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp GTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGAGGGGGCCAACAGTCTCCCACCCTaGCCGCCTGCACCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: VSESSMKTSRVCVGAEGANSLPP*PPAPWP
Trigger: GGGCCAAGGTGCAGGCGGCCAGGGTGGGAGACTGTT...GGCCCCCTCCGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTGTCAGGGTCGCCAGGTaGCGAGGCAGGTGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFVRVAR*RGRWRG
Trigger: CCCTCGCCACCTGCCTCGCCACCTGGCGACCCTGAC...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAACTCTCAAGGCAGTGTaGTGGGGTCAGGGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: FQAPAQVPTCSRAQPPRGTLKAV*WGQGRQ
Trigger: CTGGCGACCCTGACCCCACCACACTGCCTTGAGAGT...TCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCATGCTGCTGCGAGCCCTaGGGCCCTACTTTTGAGCGA +
Preference number: 4 (lower is better)
Translates to: APAQVPTCSRAQPPRGEACCCEP*GPTFER
Trigger: TCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCA...TGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp AAGGTCTCTGGGGGCCTCGGCATGTCAGGGATCACCTGGTACAGGGGCTCGAAGTGCTGCTGCGAGCCCTaGGGCCCTACTTTTGAGCGA +
Preference number: 4 (lower is better)
Translates to: KVSGGLGMSGITWYRGSKCCCEP*GPTFER
Trigger: TCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCA...CTTCGAGCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAGACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR CCA 90 bp CCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGCTGGCAGTCGGGCTCTaGGCTTTCTTTCTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: PAQVPTCSRAQPPRGEAGLAVGL*AFFLGA
Trigger: GGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAG...CCCTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAACGCTCACTGCAGCCTaGAACTGTTTCTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPTLTAA*NCFWQS
Trigger: CGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGT...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGATTCTTGGGCAGGTTCTaGATGACGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGFLGRF*MTLTAA
Trigger: GGCTGCAGTGAGCGTCATCCAGAACCTGCCCAAGAA...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGTTCTTGGGCAGGTTCTaGATGACGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGFLGRF*MTLTAA
Trigger: GGCTGCAGTGAGCGTCATCCAGAACCTGCCCAAGAA...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGACTTATATCGTCCAATaGGGTCCCAGAACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PAASQPIILPGPGPSPNLTYIVQ*GPRTRA
Trigger: GGCCCGGGTTCTGGGACCCCATTGGACGATATAAGT...CAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGATCTCAGGAAGGTCTCTaGGGGCCTCGGCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: FQAPAQVPTCSRAQPPRGSQEGL*GPRHVR
Trigger: CCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGA...TCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCTCTGGGGGCCTCGGCATGTCAGGGATCACCTGGTACAGGGGCTCGAAGTAACATGGGACTCTGGGCTTaGGGGTGCCGGTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: SLGASACQGSPGTGARSNMGLWA*GCRFLG
Trigger: CCCAAGGAACCGGCACCCCCAAGCCCAGAGTCCCAT...GTTACTTCGAGCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR CCA 90 bp CCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGAGGTCCCTGGGTGAATaGGACTCTGGGCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PAQVPTCSRAQPPRGEAGRSLGE*DSGLGG
Trigger: ACCCCCAAGCCCAGAGTCCCATTCACCCAGGGACCT...CCCTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp AGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAAGCCGAGCACTGGGCCTaGGCTGCGGCCTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SQSFFQAPAQVPTCSRAQAEHWA*AAASAQ
Trigger: CTGAGCAGAGGCCGCAGCCCAGGCCCAGTGCTCGGC...TTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTGCCATGGCCGAGCACTaGGCCTGGGCTGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFAMAEH*AWAAAS
Trigger: AGAGGCCGCAGCCCAGGCCCAGTGCTCGGCCATGGC...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGATTCGGAAGAGCCACTaGACGACGAAGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: SRPRPKSQLAQELNLLGEIRKSH*TTKGHR
Trigger: CCTGTGGCCCTTCGTCGTCCAGTGGCTCTTCCGAAT...CTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTATTCGGAAGAGCCACTaGACGACGAAGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RGLPANHSSRPRPKSQLAIRKSH*TTKGHR
Trigger: CCTGTGGCCCTTCGTCGTCCAGTGGCTCTTCCGAAT...AGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCTGGCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAGACAGTCACCTCTTTTaGGTCCGAAACATTCGGAAG +
Preference number: 4 (lower is better)
Translates to: PGLPPAASQPIILPGPGPDSHLF*VRNIRK
Trigger: CTTCCGAATGTTTCGGACCCAAAAGAGGTGACTGTC...TGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAAGATAGTCTCAGTTaGCTGCAGAGACCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASQDSLS*LQRPLH
Trigger: GTGGAGGGGTCTCTGCAGCCAACTGAGACTATCTTG...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACAAGATAGTCTCAGTTaGCTGCAGAGACCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PSRGLPANHSSRPRPKSQQDSLS*LQRPLH
Trigger: GTGGAGGGGTCTCTGCAGCCAACTGAGACTATCTTG...TTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAACGGAGTCCAGGTCCCTaGGTGAATGGGACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QAPAQVPTCSRAQPPRGERSPGP*VNGTLW
Trigger: CCACAGAGTCCCATTCACCCAGGGACCTGGACTCCG...TTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp GCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCACGGAGTCCAGGTCCCTaGGTGAATGGGACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: APAQVPTCSRAQPPRGEARSPGP*VNGTLW
Trigger: CCACAGAGTCCCATTCACCCAGGGACCTGGACTCCG...TGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR TCA 90 bp CAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAACTGGGGCCCTACTTTTaGGCGACTCTCAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QAPAQVPTCSRAQPPRGELGPYF*ATLKAV
Trigger: CACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAG...TTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGCTGGGGCCCTACTTTTaGGCGACTCTCAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PRPKSQLAQELNLLGEKQLGPYF*ATLKAV
Trigger: CACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAG...CTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCTCTTTCCAACCTGTaGCCCTTCTCAGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGALSNL*PFSGRS
Trigger: AGACCTTCCTGAGAAGGGTCACAGGTTGGAAAGAGC...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGACTGGATGACGCTCACTaGAGCCTGGAACTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGLDDAH*SLELFL
Trigger: CAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCCAG...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCACCTCCCTGCTCATCTTaGCCAGACTGTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: APAQVPTCSRAQPPRGEAPPCSS*PDCSRR
Trigger: ACGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGG...TGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCTCTCCATTCACAACCTaGTCTTTCCAACCTGTGACC +
Preference number: 4 (lower is better)
Translates to: LPPAASQPIILPGPGPSPSPFTT*SFQPVT
Trigger: GGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGA...GGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGATAGTCTCAGTTGGCTaGAGAGACCCCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGIVSVG*RDPSTD
Trigger: GTCAGTGGAGGGGTCTCTGCAGCCAACTGAGACTAT...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAATAGTCTCAGTTGGCTaGAGAGACCCCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPIVSVG*RDPSTD
Trigger: GTCAGTGGAGGGGTCTCTGCAGCCAACTGAGACTAT...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp AGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCCTCCCCCGGGGCCTaGTCACTCCTCCCAACTGGT +
Preference number: 4 (lower is better)
Translates to: SQSFFQAPAQVPTCSRAQPSPGA*SLLPTG
Trigger: ACCAGTTGGGAGGAGTGAGCAGGCCCCGGGGGAGGG...TTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCTCTGGGGGCCTCGGCATGTCAGGGATCACCTGGTACAGGGGCTCGAAGTAACCTGGCAGTCGGGCTCTaGGCTTTCTTTCTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: SLGASACQGSPGTGARSNLAVGL*AFFLGA
Trigger: GGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAG...GTTACTTCGAGCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR CCA 90 bp AGGTCTCTGGGGGCCTCGGCATGTCAGGGATCACCTGGTACAGGGGCTCGAAGTGCCTGGAACTGTTTCTaGCAGTCGGGCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: RSLGASACQGSPGTGARSAWNCF*QSGSGL
Trigger: AAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGC...ACTTCGAGCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAGACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR CCA 90 bp CTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGTTCTTGGGCAGGTTCTaGATGACGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPGPGPSPNLLKSSTSSGFLGRF*MTLTAA
Trigger: GGCTGCAGTGAGCGTCATCCAGAACCTGCCCAAGAA...CCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGCAGGGCCCCATGGTaGCCTGCTTGTAGTAACTGT +
Preference number: 4 (lower is better)
Translates to: PRPKSQLAQELNLLGEKQGRAPW*PACSNC
Trigger: ACAGTTACTACAAGCAGGCCACCATGGGGCCCTGCC...CTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAACCAGGCAGGGCCCCATaGTGGCCTGCTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: GLPANHSSRPRPKSQLAQPGRAP*WPACSN
Trigger: GTTACTACAAGCAGGCCACCATGGGGCCCTGCCTGG...TTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGACTTATATCGTCCAATaGGGTCCCAGAACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SRPRPKSQLAQELNLLGETYIVQ*GPRTRA
Trigger: GGCCCGGGTTCTGGGACCCCATTGGACGATATAAGT...CTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGTCTCAGGAAGGTCTCTaGGGGCCTCGGCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: ASQPIILPGPGPSPNLLKSQEGL*GPRHVR
Trigger: CCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGA...CTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCTCTGGGGGCCTCGGCATGTCAGGGATCACCTGGTACAGGGGCTCGAAGTAACAGGTCCCTGGGTGAATaGGACTCTGGGCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: SLGASACQGSPGTGARSNRSLGE*DSGLGG
Trigger: ACCCCCAAGCCCAGAGTCCCATTCACCCAGGGACCT...GTTACTTCGAGCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR CCA 90 bp CAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAATTCGGAAGAGCCACTaGACGACGAAGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: QAPAQVPTCSRAQPPRGEIRKSH*TTKGHR
Trigger: CCTGTGGCCCTTCGTCGTCCAGTGGCTCTTCCGAAT...TTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGTACCTCAAGGCAGTGTaGTGGGGTCAGGGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: ASQPIILPGPGPSPNLLKYLKAV*WGQGRQ
Trigger: CTGGCGACCCTGACCCCACCACACTGCCTTGAGGTA...CTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS-3UTR CCA 90 bp CAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAACGTCCTAGCGCCCCCTaGTGGAAATCCGCATCTGTT +
Preference number: 4 (lower is better)
Translates to: QAPAQVPTCSRAQPPRGERPSAP*WKSASV
Trigger: AACAGATGCGGATTTCCACCAGGGGGCGCTAGGACG...TTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp CCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGAGGTCCCTGGGTGAATaGGACTCTGTGGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PRPKSQLAQELNLLGEKQRSLGE*DSVEGL
Trigger: CAACCCCTCCACAGAGTCCCATTCACCCAGGGACCT...CTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR TCA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCAGTTTCATTTCAGTaGTGTAGGCAGACATGGCCT +
Preference number: 4 (lower is better)
Translates to: APESRPTQHRGRVPQLQPPVSFQ*CRQTWP
Trigger: AGGCCATGTCTGCCTACATCACTGAAATGAAACTGG...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGCCAGTTTCATTTCAGTaGTGTAGGCAGACATGGCCT +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWPVSFQ*CRQTWP
Trigger: AGGCCATGTCTGCCTACATCACTGAAATGAAACTGG...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp TCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCTTTCCAACCTGTaGCCCTTCTCAGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: SRGLPANHSSRPRPKSQLALSNL*PFSGRS
Trigger: AGACCTTCCTGAGAAGGGTCACAGGTTGGAAAGAGC...AAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp GTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGAGGGGGCCGAGGCAGGGAGGCTCTaGAACAGCCCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: VSESSMKTSRVCVGAEGAEAGRL*NSPNIS
Trigger: GGAGATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTC...GGCCCCCTCCGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp GCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCACAGAGACCCCTCCACTaGCAGTCACCTCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: APAQVPTCSRAQPPRGEAQRPLH*QSPLLG
Trigger: ACCCAAAAGAGGTGACTGTCAGTGGAGGGGTCTCTG...TGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp ACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTCAGGGCCCCCGCGGCGCCCACTaGCAGGACACCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: TGRGILNAVLLNPRKAQGPRGAH*QDTWVL
Trigger: GAGGACCCAGGTGTCCTGGCAGTGGGCGCCGCGGGG...GCCCTGAGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR GCA 90 bp GTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGAGGGGGCCGGCTTTCTTTCTCGGTaGCCATGCTGCTGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: VSESSMKTSRVCVGAEGAGFLSR*PCCCEP
Trigger: GGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCC...GGCCCCCTCCGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CAGGCTCCAGCTGCTCCAGGGAATCACAGAAAACCTCGGAGTCCAGGTCCCTGGCCTCCCTGCTCATCTTaGCCAGACTGTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: QAPAAPGNHRKPRSPGPWPPCSS*PDCSRR
Trigger: ACGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGG...CCAGGGACCTGGACTCCGAGGTTTTCTGTGATTCCCTGGAGCAGCTGGAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR GCA 90 bp CTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCGTCGATCACCTTCTGTaGCACCAGTTTCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: LPPAASQPIILPGPGPSPVDHLL*HQFHFS
Trigger: ACTGAAATGAAACTGGTGGCACAGAAGGTGATCGAC...GGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAACCAAACATGTCCTCTaGCACCTCACCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: GLPANHSSRPRPKSQLAQTKHVL*HLTQGH
Trigger: GTGCCCCTGGGTGAGGTGGCAGAGGACATGTTTGGT...TTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCTCTCCATTCACAACCTaGTCTTTCCAACCTGTGACC +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASSPFTT*SFQPVT
Trigger: GGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGA...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGTCTCCATTCACAACCTaGTCTTTCCAACCTGTGACC +
Preference number: 4 (lower is better)
Translates to: VTANPAPGTCTTTAASQGSPFTT*SFQPVT
Trigger: GGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGA...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGACGCTTTCCTCCAGATaGTGCCCGCTGCTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ASQPIILPGPGPSPNLLKTLSSR*CPLLCP
Trigger: TGGACAGAGCAGCGGGCAGCATCTGGAGGAAAGCGT...CTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGAGGGGGCCCTGGCAGTCGGGCTCTaGGCTTTCTTTCTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: VSESSMKTSRVCVGAEGALAVGL*AFFLGA
Trigger: GGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAG...GGCCCCCTCCGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGACGCTCACTGCAGCCTaGAACTGTTTCTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: PAQVPTCSRAQPPRGEAGTLTAA*NCFWQS
Trigger: CGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGT...CCCTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAACGCTCACTGCAGCCTaGAACTGTTTCTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: FQAPAQVPTCSRAQPPRGTLTAA*NCFWQS
Trigger: CGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGT...TCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGACTTATATCGTCCAATaGGGTCCCAGAACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: PRPKSQLAQELNLLGEKQTYIVQ*GPRTRA
Trigger: GGCCCGGGTTCTGGGACCCCATTGGACGATATAAGT...CTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGAGGGGGCCGCTGATATCCAGGCCTaGCCGATCCGAGGCAACCCA +
Preference number: 4 (lower is better)
Translates to: VSESSMKTSRVCVGAEGAADIQA*PIRGNP
Trigger: TGGGTTGCCTCGGATCGGCCAGGCCTGGATATCAGC...GGCCCCCTCCGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR CCA 90 bp TCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCCATAGTGAAAGGTCGTaGCGTCCTAGCGCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SQPIILPGPGPSPNLLKSHSERS*RPSAPW
Trigger: CCAGGGGGCGCTAGGACGCCACGACCTTTCACTATG...GCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR TCA 90 bp TCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCCTGGGGCCCTACTTTTaGGCGACTCTCAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SQPIILPGPGPSPNLLKSLGPYF*ATLKAV
Trigger: CACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAG...GCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp AGGGAATCACAGAAAACCTCGGAGTCCAGGTCCCTGGGTGAATGGGACTCTGGGTGGGCAGGTTCTGGATaGCGCTCACTGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: RESQKTSESRSLGEWDSGWAGSG*RSLQPG
Trigger: TCCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCA...CCCAGAGTCCCATTCACCCAGGGACCTGGACTCCGAGGTTTTCTGTGATTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR TCA 90 bp CCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCCAGTTTCATTTCAGTaGTGTAGGCAGACATGGCCT +
Preference number: 4 (lower is better)
Translates to: PAASQPIILPGPGPSPNLPVSFQ*CRQTWP
Trigger: AGGCCATGTCTGCCTACATCACTGAAATGAAACTGG...CAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCACCAGTTTCATTTCAGTaGTGTAGGCAGACATGGCCT +
Preference number: 4 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPPVSFQ*CRQTWP
Trigger: AGGCCATGTCTGCCTACATCACTGAAATGAAACTGG...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGACCAGTTTCATTTCAGTaGTGTAGGCAGACATGGCCT +
Preference number: 4 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGPVSFQ*CRQTWP
Trigger: AGGCCATGTCTGCCTACATCACTGAAATGAAACTGG...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp GCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGCAGAGACCCCTCCACTaGCAGTCACCTCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: ASQPIILPGPGPSPNLLKQRPLH*QSPLLG
Trigger: ACCCAAAAGAGGTGACTGTCAGTGGAGGGGTCTCTG...CTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp AGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAAAAGGAAGCGTCCCTGTaGAGCTGCAGGGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SQSFFQAPAQVPTCSRAQKEASL*SCREGW
Trigger: CCACCCCTCCCTGCAGCTTCACAGGGACGCTTCCTT...TTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTGTCCAGGTCCCTGGGTaGATGGGACTCTGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFVQVPG*MGLCGG
Trigger: CCCTCCACAGAGTCCCATTCACCCAGGGACCTGGAC...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR GCA 90 bp AGCCCCAACATCTCCATTCACAACCTGCTCTTTCCAACCTGTGACCCTTCTCAGTCTCGGTGCCCATGCTaGTGCGAGCCCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: SPNISIHNLLFPTCDPSQSRCPC*CEPWGP
Trigger: AGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGA...CTGAGAAGGGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGATGTTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR GCA 90 bp TCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCCCTCCCTGCTCATCTTaGCCAGACTGTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: SQPIILPGPGPSPNLLKSPPCSS*PDCSRR
Trigger: ACGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGG...GCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCGTCGATCACCTTCTGTaGCACCAGTTTCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: PRVTANPAPGTCTTTAASVDHLL*HQFHFS
Trigger: ACTGAAATGAAACTGGTGGCACAGAAGGTGATCGAC...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGGTCGATCACCTTCTGTaGCACCAGTTTCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWVDHLL*HQFHFS
Trigger: ACTGAAATGAAACTGGTGGCACAGAAGGTGATCGAC...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCACCAAACATGTCCTCTaGCACCTCACCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SQPIILPGPGPSPNLLKSTKHVL*HLTQGH
Trigger: GTGCCCCTGGGTGAGGTGGCAGAGGACATGTTTGGT...GCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGAGCTCAGGCTCCAGCTaGTCCAGGGAATCACAGAAA +
Preference number: 4 (lower is better)
Translates to: PAQVPTCSRAQPPRGEAGSSGSS*SRESQK
Trigger: TTTCTGTGATTCCCTGGAGCAGCTGGAGCCTGAGCT...CCCTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAACTTTCCTCCAGATGCTaGCCGCTGCTCTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: GLPANHSSRPRPKSQLAQLSSRC*PLLCPN
Trigger: GTTTGGACAGAGCAGCGGGCAGCATCTGGAGGAAAG...TTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTCTCTGCACCCTCGCCTaGACCTCCTGCATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFLCTLA*TSCMLS
Trigger: GGAGAGCATGCAGGAGGTGCAGGCGAGGGTGCAGAG...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR GCA 90 bp ACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTCAGGGCCAGGGGGCCGGGGCATaGTCTCCAGGCTCTGCACCC +
Preference number: 4 (lower is better)
Translates to: TGRGILNAVLLNPRKAQGQGAGA*SPGSAP
Trigger: GGGTGCAGAGCCTGGAGAGCATGCCCCGGCCCCCTG...GCCCTGAGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321854.13
ENST00000398322.7
CDS-3UTR GCA 90 bp TTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGCCCAAGTCCCAACTTaGTCAAGAGCTCAACCTCCT +
Preference number: 4 (lower is better)
Translates to: FQAPAQVPTCSRAQPPRGAQVPT*SRAQPP
Trigger: AGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGC...TCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGCAACTCCCGAACAGGTaGAGAAACAAGATAGGAGTA +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWQLPNR*RNKIGV
Trigger: TACTCCTATCTTGTTTCTCCACCTGTTCGGGAGTTG...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000586346.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGTCAGGGTCGCCAGGTaGCGAGGCAGGTGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: HSFVSESSMKTSRVCVGAVRVAR*RGRWRG
Trigger: CCCTCGCCACCTGCCTCGCCACCTGGCGACCCTGAC...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCGCCTGGAACTGTTTCTaGCAGTCGGGCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SQPIILPGPGPSPNLLKSAWNCF*QSGSGL
Trigger: AAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGC...GCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCAACCTGTGACCCTTCTCAGGAAGGTCTCTGGGGGCCTCGGCATGTCAGGGATTTCTTGGGCAGGTTCTaGATGACGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PTCDPSQEGLWGPRHVRDFLGRF*MTLTAA
Trigger: GGCTGCAGTGAGCGTCATCCAGAACCTGCCCAAGAA...ATCCCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGAAGGGTCACAGGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR CCA 90 bp CCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGGACAGTCACCTCTTTTaGGTCCGAAACATTCGGAAG +
Preference number: 4 (lower is better)
Translates to: PAASQPIILPGPGPSPNLDSHLF*VRNIRK
Trigger: CTTCCGAATGTTTCGGACCCAAAAGAGGTGACTGTC...CAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAACAAGATAGTCTCAGTTaGCTGCAGAGACCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: QAPAQVPTCSRAQPPRGEQDSLS*LQRPLH
Trigger: GTGGAGGGGTCTCTGCAGCCAACTGAGACTATCTTG...TTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp AGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAATGGGCAGGTTCTGGATaGCGCTCACTGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SQSFFQAPAQVPTCSRAQWAGSG*RSLQPG
Trigger: TCCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCA...TTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp TCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGCCAGTTTCATTTCAGTaGTGTAGGCAGACATGGCCT +
Preference number: 4 (lower is better)
Translates to: SRPRPKSQLAQELNLLGEPVSFQ*CRQTWP
Trigger: AGGCCATGTCTGCCTACATCACTGAAATGAAACTGG...CTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTGGCTTTCTTTCTCGGTaGCCATGCTGCTGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFGFLSR*PCCCEP
Trigger: GGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCC...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp AGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAAGGCTTTCTTTCTCGGTaGCCATGCTGCTGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: SQSFFQAPAQVPTCSRAQGFLSR*PCCCEP
Trigger: GGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCC...TTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGCTGGATGACGCTCACTaGAGCCTGGAACTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: ASQPIILPGPGPSPNLLKLDDAH*SLELFL
Trigger: CAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCCAG...CTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGTCTCCATTCACAACCTaGTCTTTCCAACCTGTGACC +
Preference number: 4 (lower is better)
Translates to: SRPRPKSQLAQELNLLGESPFTT*SFQPVT
Trigger: GGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGA...CTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAAGCTCAGGCTCCAGCTaGTCCAGGGAATCACAGAAA +
Preference number: 4 (lower is better)
Translates to: GLPANHSSRPRPKSQLAQSSGSS*SRESQK
Trigger: TTTCTGTGATTCCCTGGAGCAGCTGGAGCCTGAGCT...TTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGAGGGGGCCCTTTCCTCCAGATGCTaGCCGCTGCTCTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: VSESSMKTSRVCVGAEGALSSRC*PLLCPN
Trigger: GTTTGGACAGAGCAGCGGGCAGCATCTGGAGGAAAG...GGCCCCCTCCGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTGGGTGGGGTCTTATTTaGCCCCCGCGCTGCTTTAGG +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFGWGLI*PPRCFR
Trigger: CCTAAAGCAGCGCGGGGGGCAAATAAGACCCCACCC...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCAACTCCCGAACAGGTaGAGAAACAAGATAGGAGTA +
Preference number: 4 (lower is better)
Translates to: PAASQPIILPGPGPSPNLQLPNR*RNKIGV
Trigger: TACTCCTATCTTGTTTCTCCACCTGTTCGGGAGTTG...CAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTCTGGCAGTCGGGCTCTaGGCTTTCTTTCTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFLAVGL*AFFLGA
Trigger: GGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAG...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGAGGGGGCCACTTATATCGTCCAATaGGGTCCCAGAACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: VSESSMKTSRVCVGAEGATYIVQ*GPRTRA
Trigger: GGCCCGGGTTCTGGGACCCCATTGGACGATATAAGT...GGCCCCCTCCGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCTGAAACAGCCCCAACATCTCCATTCACAACCTGCTCTTTCCAACCTGTGACCGGGGTGCCGGTTCCTTaGGGAGGCAGGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SETAPTSPFTTCSFQPVTGVPVP*GGREAL
Trigger: CAGAGCCTCCCTGCCTCCCCAAGGAACCGGCACCCC...GGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGATGTTGGGGCTGTTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR CCA 90 bp ACACTGACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTCGTCCCGAGTGTGTGTaGGGGCGGAGGGGGCCGGCA +
Preference number: 4 (lower is better)
Translates to: TLTGRGILNAVLLNPRKARPECV*GRRGPA
Trigger: TGCCGGCCCCCTCCGCCCCCACACACACTCGGGACG...AGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGTCAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp CCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGAGGTCAGAAGTTGTaGTTGAGGAGCCTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: PRPKSQLAQELNLLGEKQGGQKL*LRSLLF
Trigger: GAAAAGGAGGCTCCTCAACCACAACTTCTGACCTCC...CTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS-3UTR CCA 90 bp TCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCAGGCCTCAGACACCCTaGGAGGTCAGAAGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: SQPIILPGPGPSPNLLKSRPQTP*EVRSCG
Trigger: ACCACAACTTCTGACCTCCCAGGGTGTCTGAGGCCT...GCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS-3UTR CCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTCGGAGTCCAGGTCCCTaGGTGAATGGGACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFRSPGP*VNGTLW
Trigger: CCACAGAGTCCCATTCACCCAGGGACCTGGACTCCG...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR TCA 90 bp GTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGAGGGGGCCGCTCTTTCCAACCTGTaGCCCTTCTCAGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: VSESSMKTSRVCVGAEGAALSNL*PFSGRS
Trigger: AGACCTTCCTGAGAAGGGTCACAGGTTGGAAAGAGC...GGCCCCCTCCGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp GCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCACATTCCTTTGTAAGTaGATCTTCAATGAAGACGTC +
Preference number: 4 (lower is better)
Translates to: ASLPRPPSQSFFQAPAQVTFLCK*IFNEDV
Trigger: GACGTCTTCATTGAAGATTCACTTACAAAGGAATGT...GACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGCCCCGCGGCGCCCACTaGCAGGACACCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLPRGAH*QDTWVL
Trigger: GAGGACCCAGGTGTCCTGGCAGTGGGCGCCGCGGGG...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTGTGTCCGTCCCCAGATaGGCCTCCTTTAGGTGCACA +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFVSVPR*ASFRCT
Trigger: TGTGCACCTAAAGGAGGCGCATCTGGGGACGGACAC...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGCTTTCTCGGTGCCCATaGTGCTGCGAGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: HSFVSESSMKTSRVCVGALSRCP*CCEPWG
Trigger: GCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAG...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCCCAACATCTCCATTCACAACCTGCTCTTTCCAACCTGTGACCCTTCTCAGGGGCTTTCTTTCTCGGTaGCCATGCTGCTGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: APTSPFTTCSFQPVTLLRGFLSR*PCCCEP
Trigger: GGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCC...CCTGAGAAGGGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGATGTTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR GCA 90 bp AGGTCTCTGGGGGCCTCGGCATGTCAGGGATCACCTGGTACAGGGGCTCGAAGTTCTCCATTCACAACCTaGTCTTTCCAACCTGTGACC +
Preference number: 4 (lower is better)
Translates to: RSLGASACQGSPGTGARSSPFTT*SFQPVT
Trigger: GGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGA...ACTTCGAGCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAGAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR GCA 90 bp CCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGTCTCCATTCACAACCTaGTCTTTCCAACCTGTGACC +
Preference number: 4 (lower is better)
Translates to: PRPKSQLAQELNLLGEKQSPFTT*SFQPVT
Trigger: GGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGA...CTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp TCTGAAACAGCCCCAACATCTCCATTCACAACCTGCTCTTTCCAACCTGTGACCCTCTGGGCTTGGGGGTaGCGGTTCCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SETAPTSPFTTCSFQPVTLWAWG*RFLGEA
Trigger: TGCCTCCCCAAGGAACCGGCACCCCCAAGCCCAGAG...GGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGATGTTGGGGCTGTTTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR GCA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGCTCTGGGCTTGGGGGTaGCGGTTCCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HSFVSESSMKTSRVCVGALWAWG*RFLGEA
Trigger: TGCCTCCCCAAGGAACCGGCACCCCCAAGCCCAGAG...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR GCA 90 bp TCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCGCCCAAGTCCCAACTTaGTCAAGAGCTCAACCTCCT +
Preference number: 4 (lower is better)
Translates to: SQPIILPGPGPSPNLLKSAQVPT*SRAQPP
Trigger: AGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGC...GCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGTGCGCCTCCTTTAGGTaGACATCTCCAACTCCTCAA +
Preference number: 4 (lower is better)
Translates to: ASQPIILPGPGPSPNLLKCASFR*TSPTPQ
Trigger: TTGAGGAGTTGGAGATGTGCACCTAAAGGAGGCGCA...CTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591859.5
CDS-3UTR CCA 90 bp AGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAAGCCTGGAACTGTTTCTaGCAGTCGGGCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SQSFFQAPAQVPTCSRAQAWNCF*QSGSGL
Trigger: AAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGC...TTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTATTCGGAAGAGCCACTaGACGACGAAGGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFIRKSH*TTKGHR
Trigger: CCTGTGGCCCTTCGTCGTCCAGTGGCTCTTCCGAAT...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGACAGTCACCTCTTTTaGGTCCGAAACATTCGGAAG +
Preference number: 4 (lower is better)
Translates to: FQAPAQVPTCSRAQPPRGDSHLF*VRNIRK
Trigger: CTTCCGAATGTTTCGGACCCAAAAGAGGTGACTGTC...TCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp TCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCCAAGATAGTCTCAGTTaGCTGCAGAGACCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SQPIILPGPGPSPNLLKSQDSLS*LQRPLH
Trigger: GTGGAGGGGTCTCTGCAGCCAACTGAGACTATCTTG...GCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp AGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACGTCCTAGCGCCCCCTaGTGGAAATCCGCATCTGTT +
Preference number: 4 (lower is better)
Translates to: SQSFFQAPAQVPTCSRAQRPSAP*WKSASV
Trigger: AACAGATGCGGATTTCCACCAGGGGGCGCTAGGACG...TTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000591859.5
CDS-3UTR TCA 90 bp GCTCCAGGGAATCACAGAAAACCTCGGAGTCCAGGTCCCTGGGTGAATGGGACTGCTCTTTCCAACCTGTaGCCCTTCTCAGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: APGNHRKPRSPGPWVNGTALSNL*PFSGRS
Trigger: AGACCTTCCTGAGAAGGGTCACAGGTTGGAAAGAGC...AGTCCCATTCACCCAGGGACCTGGACTCCGAGGTTTTCTGTGATTCCCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR TCA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGACATTCCTTTGTAAGTaGATCTTCAATGAAGACGTC +
Preference number: 4 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWTFLCK*IFNEDV
Trigger: GACGTCTTCATTGAAGATTCACTTACAAAGGAATGT...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp ACACTGACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTTCTCGGTGCCCATGCTaGTGCGAGCCCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: TLTGRGILNAVLLNPRKASRCPC*CEPWGP
Trigger: AGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGA...AGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGTCAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR GCA 90 bp GCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGTCGATCACCTTCTGTaGCACCAGTTTCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: APAQVPTCSRAQPPRGEAVDHLL*HQFHFS
Trigger: ACTGAAATGAAACTGGTGGCACAGAAGGTGATCGAC...TGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GCTCCAGGGAATCACAGAAAACCTCGGAGTCCAGGTCCCTGGGTGAATGGGACTAGCTCAGGCTCCAGCTaGTCCAGGGAATCACAGAAA +
Preference number: 4 (lower is better)
Translates to: APGNHRKPRSPGPWVNGTSSGSS*SRESQK
Trigger: TTTCTGTGATTCCCTGGAGCAGCTGGAGCCTGAGCT...AGTCCCATTCACCCAGGGACCTGGACTCCGAGGTTTTCTGTGATTCCCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR GCA 90 bp ACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTCAGGGCCTCTGCACCCTCGCCTaGACCTCCTGCATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TGRGILNAVLLNPRKAQGLCTLA*TSCMLS
Trigger: GGAGAGCATGCAGGAGGTGCAGGCGAGGGTGCAGAG...GCCCTGAGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321854.13
ENST00000398322.7
CDS-3UTR GCA 90 bp ACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTCAGGGCATGCTCTCCAGGCTCTaGACCCTCGCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: TGRGILNAVLLNPRKAQGMLSRL*TLACTS
Trigger: GGAGGTGCAGGCGAGGGTGCAGAGCCTGGAGAGCAT...GCCCTGAGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321854.13
ENST00000398322.7
CDS-3UTR GCA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGATGCTCTCCAGGCTCTaGACCCTCGCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: HSFVSESSMKTSRVCVGAMLSRL*TLACTS
Trigger: GGAGGTGCAGGCGAGGGTGCAGAGCCTGGAGAGCAT...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
CDS-3UTR GCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGCAGGGGGCCGGGGCATaGTCTCCAGGCTCTGCACCC +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLQGAGA*SPGSAP
Trigger: GGGTGCAGAGCCTGGAGAGCATGCCCCGGCCCCCTG...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGCACTGCCAGGACACCTaGGTCCTCTCTCGCCACCAC +
Preference number: 4 (lower is better)
Translates to: HSFVSESSMKTSRVCVGAHCQDT*VLSRHH
Trigger: GTGGTGGCGAGAGAGGACCCAGGTGTCCTGGCAGTG...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp CCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGCAACTCCCGAACAGGTaGAGAAACAAGATAGGAGTA +
Preference number: 4 (lower is better)
Translates to: PAQVPTCSRAQPPRGEAGQLPNR*RNKIGV
Trigger: TACTCCTATCTTGTTTCTCCACCTGTTCGGGAGTTG...CCCTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAGTCAGGGTCGCCAGGTaGCGAGGCAGGTGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSIVRVAR*RGRWRG
Trigger: CCCTCGCCACCTGCCTCGCCACCTGGCGACCCTGAC...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTACGCTCACTGCAGCCTaGAACTGTTTCTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFTLTAA*NCFWQS
Trigger: CGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGT...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp AGGGATCACCTGGTACAGGGGCTCGAAGTAACCAAACATGTCCTCTGCCACCTCACGCTCACTGCAGCCTaGAACTGTTTCTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: RDHLVQGLEVTKHVLCHLTLTAA*NCFWQS
Trigger: CGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGT...GAGGTGGCAGAGGACATGTTTGGTTACTTCGAGCCCCTGTACCAGGTGATCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR CCA 90 bp AGCCCCAACATCTCCATTCACAACCTGCTCTTTCCAACCTGTGACCCTTCTCAGTCTCAGGAAGGTCTCTaGGGGCCTCGGCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: SPNISIHNLLFPTCDPSQSQEGL*GPRHVR
Trigger: CCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGA...CTGAGAAGGGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGATGTTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR CCA 90 bp ACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTCAGGGCCGGAGTCCAGGTCCCTaGGTGAATGGGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: TGRGILNAVLLNPRKAQGRSPGP*VNGTLG
Trigger: GCCCAGAGTCCCATTCACCCAGGGACCTGGACTCCG...GCCCTGAGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp GGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGACAGTCACCTCTTTTaGGTCCGAAACATTCGGAAG +
Preference number: 4 (lower is better)
Translates to: GLPANHSSRPRPKSQLAQDSHLF*VRNIRK
Trigger: CTTCCGAATGTTTCGGACCCAAAAGAGGTGACTGTC...TTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CTGGTACAGGGGCTCGAAGTAACCAAACATGTCCTCTGCCACCTCACCCAGGGGCCAGTTTCATTTCAGTaGTGTAGGCAGACATGGCCT +
Preference number: 4 (lower is better)
Translates to: LVQGLEVTKHVLCHLTQGPVSFQ*CRQTWP
Trigger: AGGCCATGTCTGCCTACATCACTGAAATGAAACTGG...CCCCTGGGTGAGGTGGCAGAGGACATGTTTGGTTACTTCGAGCCCCTGTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR TCA 90 bp TCTGAAACAGCCCCAACATCTCCATTCACAACCTGCTCTTTCCAACCTGTGACCGAGGCAGGGAGGCTCTaGAACAGCCCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: SETAPTSPFTTCSFQPVTEAGRL*NSPNIS
Trigger: GGAGATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTC...GGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGATGTTGGGGCTGTTTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR TCA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGACATTCCTTTGTAAGTaGATCTTCAATGAAGACGTC +
Preference number: 4 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGTFLCK*IFNEDV
Trigger: GACGTCTTCATTGAAGATTCACTTACAAAGGAATGT...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp CCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGACATTCCTTTGTAAGTaGATCTTCAATGAAGACGTC +
Preference number: 4 (lower is better)
Translates to: PAASQPIILPGPGPSPNLTFLCK*IFNEDV
Trigger: GACGTCTTCATTGAAGATTCACTTACAAAGGAATGT...CAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATATCTCGGTGCCCATGCTaGTGCGAGCCCTGGGGCCCT +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSISRCPC*CEPWGP
Trigger: AGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGA...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp ACACTGACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTCTTTCTCGGTGCCCATaGTGCTGCGAGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TLTGRGILNAVLLNPRKALSRCP*CCEPWG
Trigger: GCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAG...AGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGTCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR GCA 90 bp AGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACTGGATGACGCTCACTaGAGCCTGGAACTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SQSFFQAPAQVPTCSRAQLDDAH*SLELFL
Trigger: CAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCCAG...TTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp AGCCCCAACATCTCCATTCACAACCTGCTCTTTCCAACCTGTGACCCTTCTCAGACCAAACATGTCCTCTaGCACCTCACCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SPNISIHNLLFPTCDPSQTKHVL*HLTQGH
Trigger: GTGCCCCTGGGTGAGGTGGCAGAGGACATGTTTGGT...CTGAGAAGGGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGATGTTGGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR GCA 90 bp GTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGGAGGGGGCCTCTCCATTCACAACCTaGTCTTTCCAACCTGTGACC +
Preference number: 4 (lower is better)
Translates to: VSESSMKTSRVCVGAEGASPFTT*SFQPVT
Trigger: GGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGA...GGCCCCCTCCGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp AGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAAGCCCAAGTCCCAACTTaGTCAAGAGCTCAACCTCCT +
Preference number: 4 (lower is better)
Translates to: SQSFFQAPAQVPTCSRAQAQVPT*SRAQPP
Trigger: AGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGC...TTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAAGGTGGCGAGGCAGGTaGCGAGGGCCTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSIRWRGR*RGPQCQ
Trigger: CTGGCACTGAGGCCCTCGCCACCTGCCTCGCCACCT...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGGGGGTGCCGGTTCCTTaGGGAGGCAGGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLGVPVP*GGREAL
Trigger: CAGAGCCTCCCTGCCTCCCCAAGGAACCGGCACCCC...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGAGGTCCCTGGGTGAATaGGACTCTGGGCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: HSFVSESSMKTSRVCVGARSLGE*DSGLGG
Trigger: ACCCCCAAGCCCAGAGTCCCATTCACCCAGGGACCT...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp AGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACAAGATAGTCTCAGTTaGCTGCAGAGACCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SQSFFQAPAQVPTCSRAQQDSLS*LQRPLH
Trigger: GTGGAGGGGTCTCTGCAGCCAACTGAGACTATCTTG...TTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp TCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGACATTCCTTTGTAAGTaGATCTTCAATGAAGACGTC +
Preference number: 4 (lower is better)
Translates to: SRPRPKSQLAQELNLLGETFLCK*IFNEDV
Trigger: GACGTCTTCATTGAAGATTCACTTACAAAGGAATGT...CTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR TCA 90 bp AGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAAGTCAGAAGTTGTGGTTaGGGAGCCTCCTTTTCCTAC +
Preference number: 4 (lower is better)
Translates to: SQSFFQAPAQVPTCSRAQVRSCG*GASFSY
Trigger: GTAGGAAAAGGAGGCTCCTCAACCACAACTTCTGAC...TTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS-3UTR GCA 90 bp ACACTGACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTTGGCGAGGGCCTCAGTaGCAGATGTGTCCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: TLTGRGILNAVLLNPRKAWRGPQ*QMCPSP
Trigger: TGGGGACGGACACATCTGGCACTGAGGCCCTCGCCA...AGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGTCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR GCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATACTTTCTCGGTGCCCATaGTGCTGCGAGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSILSRCP*CCEPWG
Trigger: GCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAG...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp CTCTTTCCAACCTGTGACCCTTCTCAGGAAGGTCTCTGGGGGCCTCGGCATGTCGTCGATCACCTTCTGTaGCACCAGTTTCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: LFPTCDPSQEGLWGPRHVVDHLL*HQFHFS
Trigger: ACTGAAATGAAACTGGTGGCACAGAAGGTGATCGAC...GACATGCCGAGGCCCCCAGAGACCTTCCTGAGAAGGGTCACAGGTTGGAAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR GCA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGACCAAACATGTCCTCTaGCACCTCACCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: HSFVSESSMKTSRVCVGATKHVL*HLTQGH
Trigger: GTGCCCCTGGGTGAGGTGGCAGAGGACATGTTTGGT...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATACTCTGGGCTTGGGGGTaGCGGTTCCTTGGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSILWAWG*RFLGEA
Trigger: TGCCTCCCCAAGGAACCGGCACCCCCAAGCCCAGAG...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp ACACTGACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTCACTGCCAGGACACCTaGGTCCTCTCTCGCCACCAC +
Preference number: 4 (lower is better)
Translates to: TLTGRGILNAVLLNPRKAHCQDT*VLSRHH
Trigger: GTGGTGGCGAGAGAGGACCCAGGTGTCCTGGCAGTG...AGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGTCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAAACAGTCTCCCACCCTaGCCGCCTGCACCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSINSLPP*PPAPWP
Trigger: GGGCCAAGGTGCAGGCGGCCAGGGTGGGAGACTGTT...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR TCA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGCAGAGACCCCTCCACTaGCAGTCACCTCTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: HSFVSESSMKTSRVCVGAQRPLH*QSPLLG
Trigger: ACCCAAAAGAGGTGACTGTCAGTGGAGGGGTCTCTG...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGTGGCGAGGGCCTCAGTaGCAGATGTGTCCGTCCCCA +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLWRGPQ*QMCPSP
Trigger: TGGGGACGGACACATCTGGCACTGAGGCCCTCGCCA...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATACTCTGCACCCTCGCCTaGACCTCCTGCATGCTCTCC +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSILCTLA*TSCMLS
Trigger: GGAGAGCATGCAGGAGGTGCAGGCGAGGGTGCAGAG...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGATGCTCTCCAGGCTCTaGACCCTCGCCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLMLSRL*TLACTS
Trigger: GGAGGTGCAGGCGAGGGTGCAGAGCCTGGAGAGCAT...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGCACTGCCAGGACACCTaGGTCCTCTCTCGCCACCAC +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLHCQDT*VLSRHH
Trigger: GTGGTGGCGAGAGAGGACCCAGGTGTCCTGGCAGTG...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAATGGGACTCTGGGCTTaGGGGTGCCGGTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSIMGLWA*GCRFLG
Trigger: CCCAAGGAACCGGCACCCCCAAGCCCAGAGTCCCAT...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGCGGAGTCCAGGTCCCTaGGTGAATGGGACTCTGGGC +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLRSPGP*VNGTLG
Trigger: GCCCAGAGTCCCATTCACCCAGGGACCTGGACTCCG...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp ACACTGACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTGCACGGGGCTGTTCCTaGGATCACGCTTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TLTGRGILNAVLLNPRKAARGCS*DHAFLQ
Trigger: CTGGAGGAAAGCGTGATCCCAGGAACAGCCCCGTGC...AGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGTCAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTGACAGTCACCTCTTTTaGGTCCGAAACATTCGGAAG +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFDSHLF*VRNIRK
Trigger: CTTCCGAATGTTTCGGACCCAAAAGAGGTGACTGTC...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGCTGTGGCAGACCGGGTaGGATGGCTCACGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLLWQTG*DGSRLS
Trigger: TGACAGGCGTGAGCCATCCCACCCGGTCTGCCACAG...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR TCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGTGGGCAGGTTCTGGATaGCGCTCACTGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLWAGSG*RSLQPG
Trigger: TCCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCA...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR TCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGGAGGCAGGGAGGCTCTaGAACAGCCCCAACATCTCC +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLEAGRL*NSPNIS
Trigger: GGAGATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTC...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp ACACTGACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTGTGTCCGTCCCCAGATaGGCCTCCTTTAGGTGCACA +
Preference number: 4 (lower is better)
Translates to: TLTGRGILNAVLLNPRKAVSVPR*ASFRCT
Trigger: TGTGCACCTAAAGGAGGCGCATCTGGGGACGGACAC...AGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGTCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR GCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAGGCTTTCTTTCTCGGTaGCCATGCTGCTGCGAGCCC +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSIGFLSR*PCCCEP
Trigger: GGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCC...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp GAAACAGCCCCAACATCTCCATTCACAACCTGCTCTTTCCAACCTGTGACCCTTCTGGATGACGCTCACTaGAGCCTGGAACTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: ETAPTSPFTTCSFQPVTLLDDAH*SLELFL
Trigger: CAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCCAG...AAGGGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGATGTTGGGGCTGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR GCA 90 bp AGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAAGTCGATCACCTTCTGTaGCACCAGTTTCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: SQSFFQAPAQVPTCSRAQVDHLL*HQFHFS
Trigger: ACTGAAATGAAACTGGTGGCACAGAAGGTGATCGAC...TTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTGTCGATCACCTTCTGTaGCACCAGTTTCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFVDHLL*HQFHFS
Trigger: ACTGAAATGAAACTGGTGGCACAGAAGGTGATCGAC...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGAGCTCAGGCTCCAGCTaGTCCAGGGAATCACAGAAA +
Preference number: 4 (lower is better)
Translates to: HSFVSESSMKTSRVCVGASSGSS*SRESQK
Trigger: TTTCTGTGATTCCCTGGAGCAGCTGGAGCCTGAGCT...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp ACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTCAGGGCAGCTCAGGCTCCAGCTaGTCCAGGGAATCACAGAAA +
Preference number: 4 (lower is better)
Translates to: TGRGILNAVLLNPRKAQGSSGSS*SRESQK
Trigger: TTTCTGTGATTCCCTGGAGCAGCTGGAGCCTGAGCT...GCCCTGAGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR GCA 90 bp ACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTCAGGGCATAGTCTCAGTTGGCTaGAGAGACCCCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: TGRGILNAVLLNPRKAQGIVSVG*RDPSTD
Trigger: GTCAGTGGAGGGGTCTCTGCAGCCAACTGAGACTAT...GCCCTGAGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR GCA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGATAGTCTCAGTTGGCTaGAGAGACCCCTCCACTGAC +
Preference number: 4 (lower is better)
Translates to: HSFVSESSMKTSRVCVGAIVSVG*RDPSTD
Trigger: GTCAGTGGAGGGGTCTCTGCAGCCAACTGAGACTAT...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR GCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGCTTTCCTCCAGATGCTaGCCGCTGCTCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLLSSRC*PLLSSG
Trigger: GCCTGAGCTGAGCAGCGGGCAGCATCTGGAGGAAAG...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGACTCTCAAGGCAGTGTaGTGGGGTCAGGGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLTLKAV*WGQGRQ
Trigger: CTGGCGACCCTGACCCCACCACACTGCCTTGAGAGT...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATATGCTGCTGCGAGCCCTaGGGCCCTACTTTTGAGCGA +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSICCCEP*GPTFER
Trigger: TCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCA...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATACTGGCAGTCGGGCTCTaGGCTTTCTTTCTCGGTGCC +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSILAVGL*AFFLGA
Trigger: GGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAG...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGCCAGGCAGGGCCCCATaGTGGCCTGCTTGTAGTAAC +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLPGRAP*WPACSN
Trigger: GTTACTACAAGCAGGCCACCATGGGGCCCTGCCTGG...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATATCTCAGGAAGGTCTCTaGGGGCCTCGGCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSISQEGL*GPRHVR
Trigger: CCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGA...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAAGGTCCCTGGGTGAATaGGACTCTGGGCTTGGGGGT +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSIRSLGE*DSGLGG
Trigger: ACCCCCAAGCCCAGAGTCCCATTCACCCAGGGACCT...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAGCACGGGGCTGTTCCTaGGATCACGCTTTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSIARGCS*DHAFLQ
Trigger: CTGGAGGAAAGCGTGATCCCAGGAACAGCCCCGTGC...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR TCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATACTGGGGCCCTACTTTTaGGCGACTCTCAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSILGPYF*ATLKAV
Trigger: CACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAG...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGGTGTCCGTCCCCAGATaGGCCTCCTTTAGGTGCACA +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLVSVPR*ASFRCT
Trigger: TGTGCACCTAAAGGAGGCGCATCTGGGGACGGACAC...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGCCTCCCTGCTCATCTTaGCCAGACTGTTCCAGGCGT +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLPPCSS*PDCSRR
Trigger: ACGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGG...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGACCAAACATGTCCTCTaGCACCTCACCCAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLTKHVL*HLTQGH
Trigger: GTGCCCCTGGGTGAGGTGGCAGAGGACATGTTTGGT...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGACGCTTTCCTCCAGATaGTGCCCGCTGCTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLTLSSR*CPLLSS
Trigger: TGAGCTGAGCAGCGGGCAGCATCTGGAGGAAAGCGT...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAGCCTGGAACTGTTTCTaGCAGTCGGGCTCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSIAWNCF*QSGSGL
Trigger: AAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGC...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGGGCAGGGCCCCATGGTaGCCTGCTTGTAGTAACTGT +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLGRAPW*PACSNC
Trigger: ACAGTTACTACAAGCAGGCCACCATGGGGCCCTGCC...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR TCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGGAGGTTGCAGTGAGCTaGGTTCACGCCACTTCACTC +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLEVAVS*VHATSL
Trigger: GAGTGAAGTGGCGTGAACTCAGCTCACTGCAACCTC...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp ACACTGACAGGACGGGGAATTTTGAATGCTGTTCTTCTAAACCCTAGGAAGGCTGCCCAAGTCCCAACTTaGTCAAGAGCTCAACCTCCT +
Preference number: 4 (lower is better)
Translates to: TLTGRGILNAVLLNPRKAAQVPT*SRAQPP
Trigger: AGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGC...AGCCTTCCTAGGGTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAACGCTCACTGCAGCCTaGAACTGTTTCTGGCAGTCG +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSITLTAA*NCFWQS
Trigger: CGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGT...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGTTCTTGGGCAGGTTCTaGATGACGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLFLGRF*MTLTAA
Trigger: GGCTGCAGTGAGCGTCATCCAGAACCTGCCCAAGAA...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGACTTATATCGTCCAATaGGGTCCCAGAACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLTYIVQ*GPRTRA
Trigger: GGCCCGGGTTCTGGGACCCCATTGGACGATATAAGT...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR TCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAGCTCTTTCCAACCTGTaGCCCTTCTCAGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSIALSNL*PFSGRS
Trigger: AGACCTTCCTGAGAAGGGTCACAGGTTGGAAAGAGC...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR TCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAGCGTGGCCAAGATGGTaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSIAWPRW*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCACCATCTTGGCCACGC...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATACTGGATGACGCTCACTaGAGCCTGGAACTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSILDDAH*SLELFL
Trigger: CAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCCAG...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAAGCTCAGGCTCCAGCTaGTCCAGGGAATCACAGAAA +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSISSGSS*SRESQK
Trigger: TTTCTGTGATTCCCTGGAGCAGCTGGAGCCTGAGCT...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGCAACTCCCGAACAGGTaGAGAAACAAGATAGGAGTA +
Preference number: 4 (lower is better)
Translates to: HSFVSESSMKTSRVCVGAQLPNR*RNKIGV
Trigger: TACTCCTATCTTGTTTCTCCACCTGTTCGGGAGTTG...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR TCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATACCAGTTTCATTTCAGTaGTGTAGGCAGACATGGCCT +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSIPVSFQ*CRQTWP
Trigger: AGGCCATGTCTGCCTACATCACTGAAATGAAACTGG...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATATCTCCATTCACAACCTaGTCTTTCCAACCTGTGACC +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSISPFTT*SFQPVT
Trigger: GGTCACAGGTTGGAAAGAGCAGGTTGTGAATGGAGA...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR TCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAGGTATGAAAGGGTCTTaGATGGCCAAAGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSIGMKGS*MAKVVT
Trigger: AGTCACAACTTTGGCCATTCAAGACCCTTTCATACC...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR GCA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGGTCGATCACCTTCTGTaGCACCAGTTTCATTTCAGT +
Preference number: 4 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLVDHLL*HQFHFS
Trigger: ACTGAAATGAAACTGGTGGCACAGAAGGTGATCGAC...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CCA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATACAACTCCCGAACAGGTaGAGAAACAAGATAGGAGTA +
Preference number: 4 (lower is better)
Translates to: KIRYERVLNGQSCDCLSIQLPNR*RNKIGV
Trigger: TACTCCTATCTTGTTTCTCCACCTGTTCGGGAGTTG...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CAA 90 bp GCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCTGGCCGCCTGCACCTaGGCCCAGCGTGTGCCCCGC +
Preference number: 5 (lower is better)
Translates to: APESRPTQHRGRVPQLQPLAACT*AQRVPR
Trigger: GCGGGGCACACGCTGGGCCAAGGTGCAGGCGGCCAG...AGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000586346.5
ENST00000592162.5
CDS-3UTR CAA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGCTGGCCGCCTGCACCTaGGCCCAGCGTGTGCCCCGC +
Preference number: 5 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWLAACT*AQRVPR
Trigger: GCGGGGCACACGCTGGGCCAAGGTGCAGGCGGCCAG...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000586346.5
ENST00000592162.5
CDS CCA 90 bp CAGGAGGAAGAAGAGCAGCGCGGGCCCCGGGAGCCCAAGGGGCCATaGCCGAGCACTGGGCCTGGGCTGCGGCCTCTTTCTTTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: QEEEEQRGPREPKGP*PSTGPGLRPLSLWG
Trigger: CCCCCACAAAGAAAGAGGCCGCAGCCCAGGCCCAGTGCTCGGCCATGGCCCCTTGGGCTCCCGGGGCCCGCGCTGCTCTTCTTCCTCCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592162.5
CDS-3UTR CAA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGCTGGCCGCCTGCACCTaGGCCCAGCGTGTGCCCCGC +
Preference number: 5 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGLAACT*AQRVPR
Trigger: GCGGGGCACACGCTGGGCCAAGGTGCAGGCGGCCAG...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000586346.5
ENST00000592162.5
CDS CCA 90 bp GCTGGGGTGCCGGCCTGTCCAAGCCTCGAACCCAGAACCAGTTGCTaGGGACTCCAGGCTCGGCTCCGCCTCACGCTCCCCAGGTCCGTC +
Preference number: 5 (lower is better)
Translates to: AGVPACPSLEPRTSC*GLQARLRLTLPRSV
Trigger: GACGGACCTGGGGAGCGTGAGGCGGAGCCGAGCCTGGAGTCCCCAGCAACTGGTTCTGGGTTCGAGGCTTGGACAGGCCGGCACCCCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586279.1
ENST00000587111.5
CDS-3UTR CAA 90 bp CCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCAGGGCTGGCCGCCTGCACCTaGGCCCAGCGTGTGCCCCGC +
Preference number: 5 (lower is better)
Translates to: PAQVPTCSRAQPPRGEAGLAACT*AQRVPR
Trigger: GCGGGGCACACGCTGGGCCAAGGTGCAGGCGGCCAG...CCCTGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS CCA 90 bp AAACAAGATAGGAGTACTCAGGGCGGGGCGAACAGTCTCCCACCCTaGCCGCCTGCACCTTGGCCCAGCGTGTGCCCCGCGGCGCCCACT +
Preference number: 5 (lower is better)
Translates to: KQDRSTQGGANSLPP*PPAPWPSVCPAAPT
Trigger: AGTGGGCGCCGCGGGGCACACGCTGGGCCAAGGTGCAGGCGGCCAGGGTGGGAGACTGTTCGCCCCGCCCTGAGTACTCCTATCTTGTTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000585553.5
ENST00000586346.5
ENST00000587976.5
ENST00000590289.5
ENST00000592162.5
CDS CCA 90 bp CACCACGGGTTGACGTCGCGGACAACTACACCGCGGGTGCCGGGCTaGGGTGCCGGCCTGTCCAAGCCTCGAACCCAGAACCAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: HHGLTSRTTTPRVPG*GAGLSKPRTQNQLL
Trigger: CAGCAACTGGTTCTGGGTTCGAGGCTTGGACAGGCCGGCACCCCAGCCCGGCACCCGCGGTGTAGTTGTCCGCGACGTCAACCCGTGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586279.1
ENST00000587111.5
CDS GCA 90 bp GGGGTCAGGGTCGCCAGGTGGCGAGGCAGGTGGCGAGGGCCTCAGTaGCAGATGTGTCCGTCCCCAGATGCGCCTCCTTTAGGTGCACAT +
Preference number: 5 (lower is better)
Translates to: GVRVARWRGRWRGPQ*QMCPSPDAPPLGAH
Trigger: ATGTGCACCTAAAGGAGGCGCATCTGGGGACGGACACATCTGGCACTGAGGCCCTCGCCACCTGCCTCGCCACCTGGCGACCCTGACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000587111.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS CCA 90 bp GGGCCATGGCCGAGCACTGGGCCTGGGCTGCGGCCTCTTTCTTTGTaGGGGGCACGGGGCTGTTCCTGGGATCACGCTTTCCTCCAGATG +
Preference number: 5 (lower is better)
Translates to: GPWPSTGPGLRPLSL*GARGCSWDHAFLQM
Trigger: CATCTGGAGGAAAGCGTGATCCCAGGAACAGCCCCGTGCCCCCCACAAAGAAAGAGGCCGCAGCCCAGGCCCAGTGCTCGGCCATGGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592162.5
CDS-3UTR CAA 90 bp GCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCTCCTCCCTGCTCATCTaGCCCAGACTGTTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: ASLPRPPSQSFFQAPAQVSSLLI*PRLFQA
Trigger: CGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGGA...GACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS CCA 90 bp AATCAGGCGGGGCTTAATCGAAGGGTCGGACTTCCCAGCCCGGGATaGCCAAGGCGGGCGGCAGCGCCCCCTGGTGCACATAGTGAAAGG +
Preference number: 5 (lower is better)
Translates to: NQAGLNRRVGLPSPG*PRRAAAPPGAHSER
Trigger: CCTTTCACTATGTGCACCAGGGGGCGCTGCCGCCCGCCTTGGCCATCCCGGGCTGGGAAGTCCGACCCTTCGATTAAGCCCCGCCTGATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000431281.5
ENST00000586279.1
ENST00000587111.5
ENST00000587976.5
ENST00000591859.5
ENST00000619916.4
CDS-3UTR CAA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGTCCTCCCTGCTCATCTaGCCCAGACTGTTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWSSLLI*PRLFQA
Trigger: CGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGGA...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CAA 90 bp CCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCTCCTCCCTGCTCATCTaGCCCAGACTGTTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: PRVTANPAPGTCTTTAASSSLLI*PRLFQA
Trigger: CGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGGA...GGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CAA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGAATGGGACTCTGGGCTaGGGGGTGCCGGTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGNGTLG*GVPVPW
Trigger: CCAAGGAACCGGCACCCCCAAGCCCAGAGTCCCATT...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS TCA 90 bp CATCTTGCCCAGACTGTTCCAGGCGTCCCTGGGGGCAGAGGGCTGTaGGAGGGCTGCTTGACAGCTGAGGCTTGTCTGCCCAGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: HLAQTVPGVPGGRGL*EGCLTAEACLPSQQ
Trigger: CTGCTGGCTGGGCAGACAAGCCTCAGCTGTCAAGCAGCCCTCTCACAGCCCTCTGCCCCCAGGGACGCCTGGAACAGTCTGGGCAAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000585553.5
ENST00000589752.5
ENST00000590289.5
CDS-3UTR CAA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGCCTGGGGCCCTACTTTaGAGCGACTCTCAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWPGALL*SDSQGS
Trigger: ACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAGG...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CAA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGCCTGGGGCCCTACTTTaGAGCGACTCTCAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: VTANPAPGTCTTTAASQGPGALL*SDSQGS
Trigger: ACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAGG...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CAA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGTCCTCCCTGCTCATCTaGCCCAGACTGTTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGSSLLI*PRLFQA
Trigger: CGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGGA...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS TCA 90 bp AGGCGTCCCTGGGGGCAGAGGGCTGTGAGAGGGCTGCTTGACAGCTaGGGCTTGTCTGCCCAGCCAGCAGGGAGCTCACCACTTATATCG +
Preference number: 5 (lower is better)
Translates to: RRPWGQRAVRGLLDS*GLSAQPAGSSPLIS
Trigger: CGATATAAGTGGTGAGCTCCCTGCTGGCTGGGCAGACAAGCCTCAGCTGTCAAGCAGCCCTCTCACAGCCCTCTGCCCCCAGGGACGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000585553.5
ENST00000589752.5
ENST00000590289.5
CDS CCA 90 bp CGGGCTCTGGGCTTTCTTTCTCGGTGCCCATGCTGCTGCGAGCCCTaGGGCCCTACTTTTGAGCGACTCTCAAGGCAGTGTGGTGGGGTC +
Preference number: 5 (lower is better)
Translates to: RALGFLSRCPCCCEP*GPTFERLSRQCGGV
Trigger: GACCCCACCACACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS-3UTR CAA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGACCTGGGGCCCTACTTTaGAGCGACTCTCAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGPGALL*SDSQGS
Trigger: ACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAGG...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CAA 90 bp CCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCACCTGGGGCCCTACTTTaGAGCGACTCTCAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: PSHGQPSTGDVYHNCSLPPGALL*SDSQGS
Trigger: ACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAGG...TGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CAA 90 bp CAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAAATGGGACTCTGGGCTaGGGGGTGCCGGTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: QAPAQVPTCSRAQPPRGENGTLG*GVPVPW
Trigger: CCAAGGAACCGGCACCCCCAAGCCCAGAGTCCCATT...TTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CAA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGGACTCTGTGGAGGGGTaGGTAGAGTTACTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWDSVEG*VELLPR
Trigger: TCTGGGCAGTAACTCTACCAACCCCTCCACAGAGTC...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS TCA 90 bp TCGTGGCGTCCTAGCGCCCCCTGGTGGAAATCCGCATCTGTTCGCTaGTATCCAGGCCTGGCCGATCCGAGGCAACCCACTCAGCTCTCT +
Preference number: 5 (lower is better)
Translates to: SWRPSAPWWKSASVR*YPGLADPRQPTQLS
Trigger: AGAGAGCTGAGTGGGTTGCCTCGGATCGGCCAGGCCTGGATATCAGCGAACAGATGCGGATTTCCACCAGGGGGCGCTAGGACGCCACGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000431281.5
ENST00000586279.1
ENST00000587111.5
ENST00000587976.5
ENST00000591859.5
ENST00000619916.4
CDS GCA 90 bp AGGCAGGTGGCGAGGGCCTCAGTGCCAGATGTGTCCGTCCCCAGATaGGCCTCCTTTAGGTGCACATCTCCAACTCCCGAACAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: RQVARASVPDVSVPR*ASFRCTSPTPEQVE
Trigger: CTCCACCTGTTCGGGAGTTGGAGATGTGCACCTAAAGGAGGCGCATCTGGGGACGGACACATCTGGCACTGAGGCCCTCGCCACCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000585553.5
ENST00000586346.5
ENST00000590289.5
ENST00000592162.5
CDS-3UTR CAA 90 bp GCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGAAGCATCCTCCCTGCTCATCTaGCCCAGACTGTTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: APAQVPTCSRAQPPRGEASSLLI*PRLFQA
Trigger: CGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGGA...TGCTTCTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CAA 90 bp TTCCAACCTGTGACCCTTCTCAGGAAGGTCTCTGGGGGCCTCGGCATGTCAGGGAATGGGACTCTGGGCTaGGGGGTGCCGGTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: FQPVTLLRKVSGGLGMSGNGTLG*GVPVPW
Trigger: CCAAGGAACCGGCACCCCCAAGCCCAGAGTCCCATT...CCCTGACATGCCGAGGCCCCCAGAGACCTTCCTGAGAAGGGTCACAGGTTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR CAA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGACTCTGTGGAGGGGTaGGTAGAGTTACTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGDSVEG*VELLPR
Trigger: TCTGGGCAGTAACTCTACCAACCCCTCCACAGAGTC...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR CAA 90 bp TCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGACTCTGTGGAGGGGTaGGTAGAGTTACTGCCCAGA +
Preference number: 5 (lower is better)
Translates to: SRPTQHRGRVPQLQPPRGDSVEG*VELLPR
Trigger: TCTGGGCAGTAACTCTACCAACCCCTCCACAGAGTC...TCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
CDS GCA 90 bp TCTGGCAGTCGGGCTCTGGGCTTTCTTTCTCGGTGCCCATGCTGCTaGGAGCCCTGGGGCCCTACTTTTGAGCGACTCTCAAGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: SGSRALGFLSRCPCC*EPWGPTFERLSRQC
Trigger: ACACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS GCA 90 bp GTTTCTGGCAGTCGGGCTCTGGGCTTTCTTTCTCGGTGCCCATGCTaGTGCGAGCCCTGGGGCCCTACTTTTGAGCGACTCTCAAGGCAG +
Preference number: 5 (lower is better)
Translates to: VSGSRALGFLSRCPC*CEPWGPTFERLSRQ
Trigger: CTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS GCA 90 bp CCTGGAACTGTTTCTGGCAGTCGGGCTCTGGGCTTTCTTTCTCGGTaGCCATGCTGCTGCGAGCCCTGGGGCCCTACTTTTGAGCGACTC +
Preference number: 5 (lower is better)
Translates to: PGTVSGSRALGFLSR*PCCCEPWGPTFERL
Trigger: GAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000589752.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS GCA 90 bp TCTGGCAGTCGGGCTCTGGGCTTTCTTTCTCGGTGCCCATGCTGCTaGGAGCCCTGGGGCCCTACTTTTGAGCGACTCTGCAAGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SGSRALGFLSRCPCC*EPWGPTFERLCKKQ
Trigger: CTGCTTCTTGCAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS CCA 90 bp CGGGCTCTGGGCTTTCTTTCTCGGTGCCCATGCTGCTGCGAGCCCTaGGGCCCTACTTTTGAGCGACTCTGCAAGAAGCAGCCTTCGTGT +
Preference number: 5 (lower is better)
Translates to: RALGFLSRCPCCCEP*GPTFERLCKKQPSC
Trigger: ACACGAAGGCTGCTTCTTGCAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS CCA 90 bp CCCTCCTGCTCAAGCACTAACCTGGGCTTGGGGGTGCCGGTTCCTTaGGGAGGCAGGGAGGCTCTGAAACAGCCCCAACATCTCCATTCA +
Preference number: 5 (lower is better)
Translates to: PSCSSTNLGLGVPVP*GGREALKQPQHLHS
Trigger: TGAATGGAGATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTCCCCAAGGAACCGGCACCCCCAAGCCCAGGTTAGTGCTTGAGCAGGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589752.5
CDS-3UTR CAA 90 bp TTCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGACCTGGGGCCCTACTTTaGAGCGACTCTCAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: FQAPAQVPTCSRAQPPRGPGALL*SDSQGS
Trigger: ACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAGG...TCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000321854.13
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CAA 90 bp CTGGGGGCCTCGGCATGTCAGGGATCACCTGGTACAGGGGCTCGAAGTAACCAATCCTCCCTGCTCATCTaGCCCAGACTGTTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: LGASACQGSPGTGARSNQSSLLI*PRLFQA
Trigger: CGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGGA...TTGGTTACTTCGAGCCCCTGTACCAGGTGATCCCTGACATGCCGAGGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR CAA 90 bp GTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGGGTCAGAAGTTGTGGTaGAGGAGCCTCCTTTTCCTA +
Preference number: 5 (lower is better)
Translates to: VTANPAPGTCTTTAASQGGQKLW*RSLLFL
Trigger: TAGGAAAAGGAGGCTCCTCAACCACAACTTCTGACC...CCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS-3UTR CAA 90 bp TCCAGGCCCCGGCCCAAGTCCCAACTTGCTCAAGAGCTCAACCTCCTCGGGGAGCTGGGAGGTCAGAAGTaGTGGTTGAGGAGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SRPRPKSQLAQELNLLGELGGQK*WLRSLL
Trigger: AAGGAGGCTCCTCAACCACAACTTCTGACCTCCCAG...CTCCCCGAGGAGGTTGAGCTCTTGAGCAAGTTGGGACTTGGGCCGGGGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS-3UTR CAA 90 bp CTCTTTCCAACCTGTGACCCTTCTCAGGAAGGTCTCTGGGGGCCTCGGCATGTCCCAGGCGTCCCGTTCTaGGGCAGGTTCTGGATGACG +
Preference number: 5 (lower is better)
Translates to: LFPTCDPSQEGLWGPRHVPGVPF*GRFWMT
Trigger: CGTCATCCAGAACCTGCCCAAGAACGGGACGCCTGG...GACATGCCGAGGCCCCCAGAGACCTTCCTGAGAAGGGTCACAGGTTGGAAAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS GCA 90 bp ACTGTTTCTGGCAGTCGGGCTCTGGGCTTTCTTTCTCGGTGCCCATaGTGCTGCGAGCCCTGGGGCCCTACTTTTGAGCGACTCTCAAGG +
Preference number: 5 (lower is better)
Translates to: TVSGSRALGFLSRCP*CCEPWGPTFERLSR
Trigger: CCTTGAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGAAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS GCA 90 bp GTTTCTGGCAGTCGGGCTCTGGGCTTTCTTTCTCGGTGCCCATGCTaGTGCGAGCCCTGGGGCCCTACTTTTGAGCGACTCTGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: VSGSRALGFLSRCPC*CEPWGPTFERLCKK
Trigger: CTTCTTGCAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398322.7
ENST00000589752.5
CDS GCA 90 bp ACTGTTTCTGGCAGTCGGGCTCTGGGCTTTCTTTCTCGGTGCCCATaGTGCTGCGAGCCCTGGGGCCCTACTTTTGAGCGACTCTGCAAG +
Preference number: 5 (lower is better)
Translates to: TVSGSRALGFLSRCP*CCEPWGPTFERLCK
Trigger: CTTGCAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGAAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398322.7
ENST00000589752.5
CDS GCA 90 bp AGGCAGGTGGCGAGGGCCTCAGTGCCAGATGTGTCCGTCCCCAGATaGGCCTCCTTTAGGTGCACATCTCCAACTCCTCAACCATTCAGC +
Preference number: 5 (lower is better)
Translates to: RQVARASVPDVSVPR*ASFRCTSPTPQPFS
Trigger: GCTGAATGGTTGAGGAGTTGGAGATGTGCACCTAAAGGAGGCGCATCTGGGGACGGACACATCTGGCACTGAGGCCCTCGCCACCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587111.5
ENST00000591859.5
CDS CCA 90 bp ACTGACAGTCACCTCTTTTGGGTCCGAAACATTCGGAAGAGCCACTaGACGACGAAGGGCCACAGGAGGAAGAAGAGCAGCGCGGGCCCC +
Preference number: 5 (lower is better)
Translates to: TDSHLFWVRNIRKSH*TTKGHRRKKSSAGP
Trigger: GGGGCCCGCGCTGCTCTTCTTCCTCCTGTGGCCCTTCGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAGAGGTGACTGTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS CCA 90 bp GGCGTCCCGTTCTTGGGCAGGTTCTGGATGACGCTCACTGCAGCCTaGAACTGTTTCTGGCAGTCGGGCTCTGGGCTTTCTTTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: GVPFLGRFWMTLTAA*NCFWQSGSGLSFSV
Trigger: CACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCAAGAACGGGACGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589798.5
CDS-3UTR CAA 90 bp CCTGGCCTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAACAGGACGGGGAATTTaGAATGCTGTTCTTCTAAAC +
Preference number: 5 (lower is better)
Translates to: PGLPPAASQPIILPGPGPTGRGI*NAVLLN
Trigger: GTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT...TGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAGGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS TCA 90 bp GCTGAGGCAGAGAATTGCTTGAACCCGGGGAGGCGGAGGTTGCAGTaGGCTGAGTTCACGCCACTTCACTCCAGTCTGACCGACAGAGTG +
Preference number: 5 (lower is better)
Translates to: AEAENCLNPGRRRLQ*AEFTPLHSSLTDRV
Trigger: CACTCTGTCGGTCAGACTGGAGTGAAGTGGCGTGAACTCAGCTCACTGCAACCTCCGCCTCCCCGGGTTCAAGCAATTCTCTGCCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS GCA 90 bp AGGCAGGTGGCGAGGGCCTCAGTGCCAGATGTGTCCGTCCCCAGATaGGCCTCCTTTAGGTGCACATCTCCAACTACCTCAACCATTCAG +
Preference number: 5 (lower is better)
Translates to: RQVARASVPDVSVPR*ASFRCTSPTTSTIQ
Trigger: CTGAATGGTTGAGGTAGTTGGAGATGTGCACCTAAAGGAGGCGCATCTGGGGACGGACACATCTGGCACTGAGGCCCTCGCCACCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000619916.4
CDS CCA 90 bp TTGGGCAGGTTCTGGATGACGCTCACTGCAGCCTGGAACTGTTTCTaGCAGTCGGGCTCTGGGCTTTCTTTCTCGGTGCCCATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LGRFWMTLTAAWNCF*QSGSGLSFSVPMLL
Trigger: CAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000589752.5
ENST00000589798.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS CCA 90 bp GCCTCACCGTTCTTGGGCAGGTTCTGGATGACGCTCACTGCAGCCTaGAACTGTTTCTGGCAGTCGGGCTCTGGGCTTTCTTTCTCGGTG +
Preference number: 5 (lower is better)
Translates to: ASPFLGRFWMTLTAA*NCFWQSGSGLSFSV
Trigger: CACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCAAGAACGGTGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585553.5
CDS-3UTR CAA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTAATGGGACTCTGGGCTaGGGGGTGCCGGTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFNGTLG*GVPVPW
Trigger: CCAAGGAACCGGCACCCCCAAGCCCAGAGTCCCATT...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000592162.5
CDS-3UTR CAA 90 bp CCCGCCCCCGAGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGACAGGACGGGGAATTTaGAATGCTGTTCTTCTAAAC +
Preference number: 5 (lower is better)
Translates to: PAPESRPTQHRGRVPQLQTGRGI*NAVLLN
Trigger: GTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT...CTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACTCGGGGGCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CAA 90 bp CTCCCTCCCGCGGCCTCCCAGCCAATCATTCTTCCAGGCCCCGGCCCAAGTCCCACAGGACGGGGAATTTaGAATGCTGTTCTTCTAAAC +
Preference number: 5 (lower is better)
Translates to: LPPAASQPIILPGPGPSPTGRGI*NAVLLN
Trigger: GTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT...GGGACTTGGGCCGGGGCCTGGAAGAATGATTGGCTGGGAGGCCGCGGGAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000591859.5
ENST00000592162.5
CDS CCA 90 bp GTCTCAGTTGGCTGCAGAGACCCCTCCACTGACAGTCACCTCTTTTaGGTCCGAAACATTCGGAAGAGCCACTGGACGACGAAGGGCCAC +
Preference number: 5 (lower is better)
Translates to: VSVGCRDPSTDSHLF*VRNIRKSHWTTKGH
Trigger: GTGGCCCTTCGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAGAGGTGACTGTCAGTGGAGGGGTCTCTGCAGCCAACTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CAA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGCTGGCCGCCTGCACCTaGGCCCAGCGTGTGCCCCGC +
Preference number: 5 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLLAACT*AQRVPR
Trigger: GCGGGGCACACGCTGGGCCAAGGTGCAGGCGGCCAG...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CAA 90 bp CCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGGAGCCTGGACAGGACGGGGAATTTaGAATGCTGTTCTTCTAAAC +
Preference number: 5 (lower is better)
Translates to: PTQHRGRVPQLQPPRGAWTGRGI*NAVLLN
Trigger: GTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT...CCAGGCTCCCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS GCA 90 bp ATCAGGACCATTCTTTCTTCAGAGTCAGACCCCAGGCGTCCTGAATaGGAGTCCAAATGCGAGTCCCCGCAGCCTCACCGTTCTTGGGCA +
Preference number: 5 (lower is better)
Translates to: IRTILSSESDPRRPE*ESKCESPQPHRSWA
Trigger: TGCCCAAGAACGGTGAGGCTGCGGGGACTCGCATTTGGACTCGCATTCAGGACGCCTGGGGTCTGACTCTGAAGAAAGAATGGTCCTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585553.5
CDS CCA 90 bp TCCAGGGAATCACAGAAAACCTCGGAGTCCAGGTCCCTGGGTGAATaGGACTCTGTGGAGGGGTTGGTAGAGTTACTGCCCAGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: SRESQKTSESRSLGE*DSVEGLVELLPRGK
Trigger: CTTCCCTCTGGGCAGTAACTCTACCAACCCCTCCACAGAGTCCCATTCACCCAGGGACCTGGACTCCGAGGTTTTCTGTGATTCCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000591859.5
CDS-3UTR CAA 90 bp AGTCACGGCCAACCCAGCACCGGGGACGTGTACCACAACTGCAGCCTCCCAGGGACAGGACGGGGAATTTaGAATGCTGTTCTTCTAAAC +
Preference number: 5 (lower is better)
Translates to: SHGQPSTGDVYHNCSLPGTGRGI*NAVLLN
Trigger: GTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT...CCCTGGGAGGCTGCAGTTGTGGTACACGTCCCCGGTGCTGGGTTGGCCGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS TCA 90 bp GGGGCACTGTGTCGATCACCTTCTGTGCCACCAGTTTCATTTCAGTaGTGTAGGCAGACATGGCCTCCTCCCTGCTCATCTTGCCCAGAC +
Preference number: 5 (lower is better)
Translates to: GALCRSPSVPPVSFQ*CRQTWPPPCSSCPD
Trigger: GTCTGGGCAAGATGAGCAGGGAGGAGGCCATGTCTGCCTACATCACTGAAATGAAACTGGTGGCACAGAAGGTGATCGACACAGTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000589752.5
ENST00000589798.5
ENST00000590289.5
ENST00000591136.1
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS TCA 90 bp AGTGATCAGGACCATTCTTTCTTCAGAGTCAGACCCCAGGCGTCCTaGATGCGAGTCCAAATGCGAGTCCCCGCAGCCTCACCGTTCTTG +
Preference number: 5 (lower is better)
Translates to: SDQDHSFFRVRPQAS*MRVQMRVPAASPFL
Trigger: CAAGAACGGTGAGGCTGCGGGGACTCGCATTTGGACTCGCATTCAGGACGCCTGGGGTCTGACTCTGAAGAAAGAATGGTCCTGATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585553.5
CDS GCA 90 bp GCCTCAGTGCCAGATGTGTCCGTCCCCAGATGCGCCTCCTTTAGGTaGACATCTCCAACTCCCGAACAGGTGGAGAAACAAGATAGGAGT +
Preference number: 5 (lower is better)
Translates to: ASVPDVSVPRCASFR*TSPTPEQVEKQDRS
Trigger: ACTCCTATCTTGTTTCTCCACCTGTTCGGGAGTTGGAGATGTGCACCTAAAGGAGGCGCATCTGGGGACGGACACATCTGGCACTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000585553.5
ENST00000586346.5
ENST00000590289.5
ENST00000592162.5
CDS CCA 90 bp CTAAGCTCTTTAGAGGCCTCAGACACCCTGGGAGGTCAGAAGTTGTaGTTGAGGAGCCTCCTTTTCCTACCTCAAGGCAGTGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LSSLEASDTLGGQKL*LRSLLFLPQGSVVG
Trigger: CCCCACCACACTGCCTTGAGGTAGGAAAAGGAGGCTCCTCAACCACAACTTCTGACCTCCCAGGGTGTCTGAGGCCTCTAAAGAGCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS TCA 90 bp AGGGCACAGCAAGATAGTCTCAGTTGGCTGCAGAGACCCCTCCACTaGCAGTCACCTCTTTTGGGTCCGAAACATTCGGAAGAGCCACTG +
Preference number: 5 (lower is better)
Translates to: RAQQDSLSWLQRPLH*QSPLLGPKHSEEPL
Trigger: CAGTGGCTCTTCCGAATGTTTCGGACCCAAAAGAGGTGACTGTCAGTGGAGGGGTCTCTGCAGCCAACTGAGACTATCTTGCTGTGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CAA 90 bp CATTCCTTTGTAAGTGAATCTTCAATGAAGACGTCCCGAGTGTGTGTGGGGGCGCCTGGGGCCCTACTTTaGAGCGACTCTGCAAGAAGC +
Preference number: 5 (lower is better)
Translates to: HSFVSESSMKTSRVCVGAPGALL*SDSARS
Trigger: GCTTCTTGCAGAGTCGCTCAAAAGTAGGGCCCCAGG...CGCCCCCACACACACTCGGGACGTCTTCATTGAAGATTCACTTACAAAGGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS-3UTR CAA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATAAATGGGACTCTGGGCTaGGGGGTGCCGGTTCCTTGG +
Preference number: 5 (lower is better)
Translates to: KIRYERVLNGQSCDCLSINGTLG*GVPVPW
Trigger: CCAAGGAACCGGCACCCCCAAGCCCAGAGTCCCATT...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CAA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGTCCTCCCTGCTCATCTaGCCCAGACTGTTCCAGGCG +
Preference number: 5 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLSSLLI*PRLFQA
Trigger: CGCCTGGAACAGTCTGGGCAAGATGAGCAGGGAGGA...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CAA 90 bp GAACATAAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGCCTGGGGCCCTACTTTaGAGCGACTCTCAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: EHKIRYERVLNGQSCDCLPGALL*SDSQGS
Trigger: ACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAGG...CAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTTATGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS-3UTR CAA 90 bp CGCTGCTTTAGGGGAGGAGGTGCGAAGGCAAACACTGACAGGACGGGGAATTTTACAGGACGGGGAATTTaGAATGCTGTTCTTCTAAAC +
Preference number: 5 (lower is better)
Translates to: RCFRGGGAKANTDRTGNFTGRGI*NAVLLN
Trigger: GTTTAGAAGAACAGCATTCAAAATTCCCCGTCCTGT...AAAATTCCCCGTCCTGTCAGTGTTTGCCTTCGCACCTCCTCCCCTAAAGCAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS-3UTR CAA 90 bp AAGATCCGGTATGAAAGGGTCTTGAATGGCCAAAGTTGTGACTGTCTGAGCATACGGTATGAAAGGGTCTaGAATGGCCAAAGTTGTGAC +
Preference number: 5 (lower is better)
Translates to: KIRYERVLNGQSCDCLSIRYERV*NGQSCD
Trigger: GTCACAACTTTGGCCATTCAAGACCCTTTCATACCG...TATGCTCAGACAGTCACAACTTTGGCCATTCAAGACCCTTTCATACCGGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS GCA 72 bp GGCCATGGCCGAGCACTGGGCCTGGGCTGCGGCCTCTaGTCAGGGGGCCGGGGCATGCTCTCCAGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: GHGRALGLGCGL*SGGRGMLSRLC
Trigger: GCAGAGCCTGGAGAGCATGCCCCGGCCCCCTGAGCAGAGGCCGCAGCCCAGGCCCAGTGCTCGGCCATGGCC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000591859.5
CDS CCA 72 bp AGGAGTACTCAGGGCGGGGCGAACAGTCTCCCACCCTaGCCGCCTGCACCTTGGCCCAGCGTGTGCCCCGCG +
Preference number: 6 (lower is better)
Translates to: RSTQGGANSLPP*PPAPWPSVCPA
Trigger: CGCGGGGCACACGCTGGGCCAAGGTGCAGGCGGCCAGGGTGGGAGACTGTTCGCCCCGCCCTGAGTACTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000585553.5
ENST00000586346.5
ENST00000587976.5
ENST00000590289.5
ENST00000592162.5
CDS CCA 72 bp GCCTCACGCTCCCCAGGTCCGTCAGCTCCGAGACTGTaGCTCTCCGAGGGGGCAGCACCTGGCGAGCAGGGG +
Preference number: 6 (lower is better)
Translates to: ASRSPGPSAPRL*LSEGAAPGEQG
Trigger: CCCCTGCTCGCCAGGTGCTGCCCCCTCGGAGAGCCACAGTCTCGGAGCTGACGGACCTGGGGAGCGTGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586279.1
ENST00000587111.5
CDS CCA 72 bp GGGCTTAATCGAAGGGTCGGACTTCCCAGCCCGGGATaGCCAAGGCGGGCGGCAGCGCCCCCTGGTGCACAT +
Preference number: 6 (lower is better)
Translates to: GLNRRVGLPSPG*PRRAAAPPGAH
Trigger: ATGTGCACCAGGGGGCGCTGCCGCCCGCCTTGGCCATCCCGGGCTGGGAAGTCCGACCCTTCGATTAAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000431281.5
ENST00000586279.1
ENST00000587111.5
ENST00000587976.5
ENST00000591859.5
ENST00000619916.4
CDS CCA 72 bp CCGGCCTGTCCAAGCCTCGAACCCAGAACCAGTTGCTaGGGACTCCAGGCTCGGCTCCGCCTCACGCTCCCC +
Preference number: 6 (lower is better)
Translates to: PACPSLEPRTSC*GLQARLRLTLP
Trigger: GGGGAGCGTGAGGCGGAGCCGAGCCTGGAGTCCCCAGCAACTGGTTCTGGGTTCGAGGCTTGGACAGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586279.1
ENST00000587111.5
CDS GCA 72 bp CTCTGCTCAGGGGGCCGGGGCATGCTCTCCAGGCTCTaGACCCTCGCCTGCACCTCCTGCATGCTCTCCTGT +
Preference number: 6 (lower is better)
Translates to: LCSGGRGMLSRL*TLACTSCMLSC
Trigger: ACAGGAGAGCATGCAGGAGGTGCAGGCGAGGGTGCAGAGCCTGGAGAGCATGCCCCGGCCCCCTGAGCAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000591859.5
CDS GCA 72 bp GACTGCTCAGGGGGCCGGGGCATGCTCTCCAGGCTCTaGACCCTCGCCTGCACCTCCTGCATGCTCTCCTGT +
Preference number: 6 (lower is better)
Translates to: DCSGGRGMLSRL*TLACTSCMLSC
Trigger: ACAGGAGAGCATGCAGGAGGTGCAGGCGAGGGTGCAGAGCCTGGAGAGCATGCCCCGGCCCCCTGAGCAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000376955.8
ENST00000619916.4
CDS GCA 72 bp GTGCCGGCCTGTCCAAGCCTCGAACCCAGAACCAGTTaGTGGGGACTCCAGGCTCGGCTCCGCCTCACGCTC +
Preference number: 6 (lower is better)
Translates to: VPACPSLEPRTS*WGLQARLRLTL
Trigger: GAGCGTGAGGCGGAGCCGAGCCTGGAGTCCCCAGCAACTGGTTCTGGGTTCGAGGCTTGGACAGGCCGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586279.1
ENST00000587111.5
CDS CCA 72 bp TTGACGTCGCGGACAACTACACCGCGGGTGCCGGGCTaGGGTGCCGGCCTGTCCAAGCCTCGAACCCAGAAC +
Preference number: 6 (lower is better)
Translates to: LTSRTTTPRVPG*GAGLSKPRTQN
Trigger: GTTCTGGGTTCGAGGCTTGGACAGGCCGGCACCCCAGCCCGGCACCCGCGGTGTAGTTGTCCGCGACGTCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586279.1
ENST00000587111.5
CDS CAA 72 bp GGTGCCGGCCTGTCCAAGCCTCGAACCCAGAACCAGTaGCTGGGGACTCCAGGCTCGGCTCCGCCTCACGCT +
Preference number: 6 (lower is better)
Translates to: GAGLSKPRTQNQ*LGTPGSAPPHA
Trigger: AGCGTGAGGCGGAGCCGAGCCTGGAGTCCCCAGCAACTGGTTCTGGGTTCGAGGCTTGGACAGGCCGGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586279.1
ENST00000587111.5
CDS GCA 72 bp GTCGCCAGGTGGCGAGGCAGGTGGCGAGGGCCTCAGTaGCAGATGTGTCCGTCCCCAGATGCGCCTCCTTTA +
Preference number: 6 (lower is better)
Translates to: VARWRGRWRGPQ*QMCPSPDAPPL
Trigger: TAAAGGAGGCGCATCTGGGGACGGACACATCTGGCACTGAGGCCCTCGCCACCTGCCTCGCCACCTGGCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000587111.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS CCA 72 bp GCGGCAGCGCCCCCTGGTGCACATAGTGAAAGGTCGTaGCGTCCTAGCGCCCCCTGGTGGAAATCCGCATCT +
Preference number: 6 (lower is better)
Translates to: AAAPPGAHSERS*RPSAPWWKSAS
Trigger: AGATGCGGATTTCCACCAGGGGGCGCTAGGACGCCACGACCTTTCACTATGTGCACCAGGGGGCGCTGCCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000431281.5
ENST00000586279.1
ENST00000587111.5
ENST00000587976.5
ENST00000591859.5
ENST00000619916.4
CDS CCA 72 bp CCCTGCTCATCTTGCCCAGACTGTTCCAGGCGTCCCTaGGGGCAGAGGGCTGTGAGAGGGCTGCTTGACAGC +
Preference number: 6 (lower is better)
Translates to: PCSSCPDCSRRP*GQRAVRGLLDS
Trigger: GCTGTCAAGCAGCCCTCTCACAGCCCTCTGCCCCCAGGGACGCCTGGAACAGTCTGGGCAAGATGAGCAGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585553.5
ENST00000589752.5
ENST00000590289.5
CDS GCA 72 bp CGGGCTCTGGGCTTTCTTTCTCGGTGCCCATGCTGCTaGGAGCCCTGGGGCCCTACTTTTGAGCGACTCTGC +
Preference number: 6 (lower is better)
Translates to: RALGFLSRCPCC*EPWGPTFERLC
Trigger: GCAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398322.7
ENST00000589752.5
CDS TCA 72 bp CCTAGCGCCCCCTGGTGGAAATCCGCATCTGTTCGCTaGTATCCAGGCCTGGCCGATCCGAGGCAACCCACT +
Preference number: 6 (lower is better)
Translates to: PSAPWWKSASVR*YPGLADPRQPT
Trigger: AGTGGGTTGCCTCGGATCGGCCAGGCCTGGATATCAGCGAACAGATGCGGATTTCCACCAGGGGGCGCTAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000431281.5
ENST00000586279.1
ENST00000587111.5
ENST00000587976.5
ENST00000591859.5
ENST00000619916.4
CDS GCA 72 bp CGGGCTCTGGGCTTTCTTTCTCGGTGCCCATGCTGCTaGGAGCCCTGGGGCCCTACTTTTGAGCGACTCTCA +
Preference number: 6 (lower is better)
Translates to: RALGFLSRCPCC*EPWGPTFERLS
Trigger: TGAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS GCA 72 bp AGTCGGGCTCTGGGCTTTCTTTCTCGGTGCCCATGCTaGTGCGAGCCCTGGGGCCCTACTTTTGAGCGACTC +
Preference number: 6 (lower is better)
Translates to: SRALGFLSRCPC*CEPWGPTFERL
Trigger: GAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000589752.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS GCA 72 bp GAGTCAGACCCCAGGCGTCCTGAATGCGAGTCCAAATaGGAGTCCCCGCAGCCTCACCGTTCTTGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: ESDPRRPECESK*ESPQPHRSWAG
Trigger: ACCTGCCCAAGAACGGTGAGGCTGCGGGGACTCGCATTTGGACTCGCATTCAGGACGCCTGGGGTCTGACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585553.5
CDS CAA 72 bp GGTGCCCATGCTGCTGCGAGCCCTGGGGCCCTACTTTaGAGCGACTCTGCAAGAAGCAGCCTTCGTGTGAGG +
Preference number: 6 (lower is better)
Translates to: GAHAAASPGALL*SDSARSSLRVR
Trigger: CCTCACACGAAGGCTGCTTCTTGCAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS CAA 72 bp CGAGTCCAAATGCGAGTCCCCGCAGCCTCACCGTTCTaGGGCAGGTTCTGGATGACGCTCACTGCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: RVQMRVPAASPF*GRFWMTLTAAW
Trigger: CCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCAAGAACGGTGAGGCTGCGGGGACTCGCATTTGGACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585553.5
CDS CAA 90 bp TTCTTTCTCGGTGCCCATGCTGCTGCGAGCCCTGGGGCCCTACTTTaGAGCGACTCTGCAAGAAGCAGCCTTCGTGTGAGGGGGCCTCCA +
Preference number: 6 (lower is better)
Translates to: FFLGAHAAASPGALL*SDSARSSLRVRGPP
Trigger: TGGAGGCCCCCTCACACGAAGGCTGCTTCTTGCAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS GCA 72 bp GCGAGGGCCTCAGTGCCAGATGTGTCCGTCCCCAGATaGGCCTCCTTTAGGTGCACATCTCCAACTCCCGAA +
Preference number: 6 (lower is better)
Translates to: ARASVPDVSVPR*ASFRCTSPTPE
Trigger: TTCGGGAGTTGGAGATGTGCACCTAAAGGAGGCGCATCTGGGGACGGACACATCTGGCACTGAGGCCCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000585553.5
ENST00000586346.5
ENST00000590289.5
ENST00000592162.5
CDS GCA 72 bp GTTTCTGGCAGTCGGGCTCTGGGCTTTCTTTCTCGGTaGCCATGCTGCTGCGAGCCCTGGGGCCCTACTTTT +
Preference number: 6 (lower is better)
Translates to: VSGSRALGFLSR*PCCCEPWGPTF
Trigger: AAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000589752.5
ENST00000589798.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS GCA 72 bp TCCAGATGCTGCCCGCTGCTCAGCTCAGGCTCCAGCTaGTCCAGGGAATCACAGAAAACCTCGGAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: SRCCPLLSSGSS*SRESQKTSESR
Trigger: CCTGGACTCCGAGGTTTTCTGTGATTCCCTGGAGCAGCTGGAGCCTGAGCTGAGCAGCGGGCAGCATCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376955.8
ENST00000619916.4
CDS CCA 72 bp CGAGTCCCCGCAGCCTCACCGTTCTTGGGCAGGTTCTaGATGACGCTCACTGCAGCCTGGAACTGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: RVPAASPFLGRF*MTLTAAWNCFW
Trigger: CCAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCAAGAACGGTGAGGCTGCGGGGACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585553.5
CDS CCA 72 bp TCAAGCACTAACCTGGGCTTGGGGGTGCCGGTTCCTTaGGGAGGCAGGGAGGCTCTGAAACAGCCCCAACAT +
Preference number: 6 (lower is better)
Translates to: SSTNLGLGVPVP*GGREALKQPQH
Trigger: ATGTTGGGGCTGTTTCAGAGCCTCCCTGCCTCCCCAAGGAACCGGCACCCCCAAGCCCAGGTTAGTGCTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589752.5
CDS GCA 72 bp GCGAGGGCCTCAGTGCCAGATGTGTCCGTCCCCAGATaGGCCTCCTTTAGGTGCACATCTCCAACTACCTCA +
Preference number: 6 (lower is better)
Translates to: ARASVPDVSVPR*ASFRCTSPTTS
Trigger: TGAGGTAGTTGGAGATGTGCACCTAAAGGAGGCGCATCTGGGGACGGACACATCTGGCACTGAGGCCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000619916.4
CDS GCA 72 bp GCGAGGGCCTCAGTGCCAGATGTGTCCGTCCCCAGATaGGCCTCCTTTAGGTGCACATCTCCAACTCCTCAA +
Preference number: 6 (lower is better)
Translates to: ARASVPDVSVPR*ASFRCTSPTPQ
Trigger: TTGAGGAGTTGGAGATGTGCACCTAAAGGAGGCGCATCTGGGGACGGACACATCTGGCACTGAGGCCCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587111.5
ENST00000591859.5
CDS CCA 72 bp GGCTTTCTTTCTCGGTGCCCATGCTGCTGCGAGCCCTaGGGCCCTACTTTTGAGCGACTCTCAAGGCAGTGT +
Preference number: 6 (lower is better)
Translates to: GFLSRCPCCCEP*GPTFERLSRQC
Trigger: ACACTGCCTTGAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS CCA 72 bp GGCTTTCTTTCTCGGTGCCCATGCTGCTGCGAGCCCTaGGGCCCTACTTTTGAGCGACTCTGCAAGAAGCAG +
Preference number: 6 (lower is better)
Translates to: GFLSRCPCCCEP*GPTFERLCKKQ
Trigger: CTGCTTCTTGCAGAGTCGCTCAAAAGTAGGGCCCCAGGGCTCGCAGCAGCATGGGCACCGAGAAAGAAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS TCA 72 bp GAGAATTGCTTGAACCCGGGGAGGCGGAGGTTGCAGTaGGCTGAGTTCACGCCACTTCACTCCAGTCTGACC +
Preference number: 6 (lower is better)
Translates to: ENCLNPGRRRLQ*AEFTPLHSSLT
Trigger: GGTCAGACTGGAGTGAAGTGGCGTGAACTCAGCTCACTGCAACCTCCGCCTCCCCGGGTTCAAGCAATTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376955.8
CDS CCA 72 bp TTCTGGATGACGCTCACTGCAGCCTGGAACTGTTTCTaGCAGTCGGGCTCTGGGCTTTCTTTCTCGGTGCCC +
Preference number: 6 (lower is better)
Translates to: FWMTLTAAWNCF*QSGSGLSFSVP
Trigger: GGGCACCGAGAAAGAAAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCCAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000589752.5
ENST00000589798.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS CCA 72 bp GGCTGCAGAGACCCCTCCACTGACAGTCACCTCTTTTaGGTCCGAAACATTCGGAAGAGCCACTGGACGACG +
Preference number: 6 (lower is better)
Translates to: GCRDPSTDSHLF*VRNIRKSHWTT
Trigger: CGTCGTCCAGTGGCTCTTCCGAATGTTTCGGACCCAAAAGAGGTGACTGTCAGTGGAGGGGTCTCTGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS CCA 72 bp GGTGGAAATCCGCATCTGTTCGCTGATATCCAGGCCTaGCCGATCCGAGGCAACCCACTCAGCTCTCTAGAC +
Preference number: 6 (lower is better)
Translates to: GGNPHLFADIQA*PIRGNPLSSLD
Trigger: GTCTAGAGAGCTGAGTGGGTTGCCTCGGATCGGCCAGGCCTGGATATCAGCGAACAGATGCGGATTTCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000431281.5
ENST00000586279.1
ENST00000587111.5
ENST00000587976.5
ENST00000591859.5
ENST00000619916.4
CDS TCA 72 bp AGGCCTCAGACACCCTGGGAGGTCAGAAGTTGTGGTTaGGGAGCCTCCTTTTCCTACCTCAAGGCAGTGTGG +
Preference number: 6 (lower is better)
Translates to: RPQTPWEVRSCG*GASFSYLKAVW
Trigger: CCACACTGCCTTGAGGTAGGAAAAGGAGGCTCCTCAACCACAACTTCTGACCTCCCAGGGTGTCTGAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS TCA 72 bp GACCATTCTTTCTTCAGAGTCAGACCCCAGGCGTCCTaGATGCGAGTCCAAATGCGAGTCCCCGCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: DHSFFRVRPQAS*MRVQMRVPAAS
Trigger: TGAGGCTGCGGGGACTCGCATTTGGACTCGCATTCAGGACGCCTGGGGTCTGACTCTGAAGAAAGAATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585553.5
CDS GCA 72 bp ATTCTTTCTTCAGAGTCAGACCCCAGGCGTCCTGAATaGGAGTCCAAATGCGAGTCCCCGCAGCCTCACCGT +
Preference number: 6 (lower is better)
Translates to: ILSSESDPRRPE*ESKCESPQPHR
Trigger: ACGGTGAGGCTGCGGGGACTCGCATTTGGACTCGCATTCAGGACGCCTGGGGTCTGACTCTGAAGAAAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585553.5
CDS CCA 72 bp TTCTTGGGCAGGTTCTGGATGACGCTCACTGCAGCCTaGAACTGTTTCTGGCAGTCGGGCTCTGGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: FLGRFWMTLTAA*NCFWQSGSGLS
Trigger: AGAAAGCCCAGAGCCCGACTGCCAGAAACAGTTCCAGGCTGCAGTGAGCGTCATCCAGAACCTGCCCAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000589752.5
ENST00000589798.5
ENST00000590289.5
ENST00000591859.5
ENST00000592162.5
ENST00000619916.4
CDS GCA 72 bp CCAGATGTGTCCGTCCCCAGATGCGCCTCCTTTAGGTaGACATCTCCAACTCCCGAACAGGTGGAGAAACAA +
Preference number: 6 (lower is better)
Translates to: PDVSVPRCASFR*TSPTPEQVEKQ
Trigger: TTGTTTCTCCACCTGTTCGGGAGTTGGAGATGTGCACCTAAAGGAGGCGCATCTGGGGACGGACACATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000585553.5
ENST00000586346.5
ENST00000590289.5
ENST00000592162.5
CDS GCA 72 bp GAAGGCTCAGGGCACAGCAAGATAGTCTCAGTTGGCTaGAGAGACCCCTCCACTGACAGTCACCTCTTTTGG +
Preference number: 6 (lower is better)
Translates to: EGSGHSKIVSVG*RDPSTDSHLFW
Trigger: CCAAAAGAGGTGACTGTCAGTGGAGGGGTCTCTGCAGCCAACTGAGACTATCTTGCTGTGCCCTGAGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5
CDS GCA 72 bp CCAGATGTGTCCGTCCCCAGATGCGCCTCCTTTAGGTaGACATCTCCAACTACCTCAACCATTCAGCACAGC +
Preference number: 6 (lower is better)
Translates to: PDVSVPRCASFR*TSPTTSTIQHS
Trigger: GCTGTGCTGAATGGTTGAGGTAGTTGGAGATGTGCACCTAAAGGAGGCGCATCTGGGGACGGACACATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431281.5
ENST00000619916.4
CDS GCA 72 bp CCAGATGTGTCCGTCCCCAGATGCGCCTCCTTTAGGTaGACATCTCCAACTCCTCAACCATTCAGCACAGCT +
Preference number: 6 (lower is better)
Translates to: PDVSVPRCASFR*TSPTPQPFSTA
Trigger: AGCTGTGCTGAATGGTTGAGGAGTTGGAGATGTGCACCTAAAGGAGGCGCATCTGGGGACGGACACATCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587111.5
ENST00000591859.5
CDS CCA 72 bp CCTCCTTTAGGTGCACATCTCCAACTCCCGAACAGGTaGAGAAACAAGATAGGAGTACTCAGGGCGGGGCGA +
Preference number: 6 (lower is better)
Translates to: PPLGAHLQLPNR*RNKIGVLRAGR
Trigger: TCGCCCCGCCCTGAGTACTCCTATCTTGTTTCTCCACCTGTTCGGGAGTTGGAGATGTGCACCTAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000321854.13
ENST00000376955.8
ENST00000398322.7
ENST00000585553.5
ENST00000586346.5
ENST00000587976.5
ENST00000590289.5
ENST00000592162.5
CDS CCA 72 bp TTAGAGGCCTCAGACACCCTGGGAGGTCAGAAGTTGTaGTTGAGGAGCCTCCTTTTCCTACCTCAAGGCAGT +
Preference number: 6 (lower is better)
Translates to: LEASDTLGGQKL*LRSLLFLPQGS
Trigger: ACTGCCTTGAGGTAGGAAAAGGAGGCTCCTCAACCACAACTTCTGACCTCCCAGGGTGTCTGAGGCCTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS CAA 90 bp AAACTAAGCTCTTTAGAGGCCTCAGACACCCTGGGAGGTCAGAAGTaGTGGTTGAGGAGCCTCCTTTTCCTACCTCAAGGCAGTGTGGTG +
Preference number: 6 (lower is better)
Translates to: KLSSLEASDTLGGQK*WLRSLLFLPQGSVV
Trigger: CACCACACTGCCTTGAGGTAGGAAAAGGAGGCTCCTCAACCACAACTTCTGACCTCCCAGGGTGTCTGAGGCCTCTAAAGAGCTTAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398322.7
CDS TCA 72 bp CAAGATAGTCTCAGTTGGCTGCAGAGACCCCTCCACTaGCAGTCACCTCTTTTGGGTCCGAAACATTCGGAA +
Preference number: 6 (lower is better)
Translates to: QDSLSWLQRPLH*QSPLLGPKHSE
Trigger: TTCCGAATGTTTCGGACCCAAAAGAGGTGACTGTCAGTGGAGGGGTCTCTGCAGCCAACTGAGACTATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000321854.13
ENST00000398322.7
ENST00000431281.5
ENST00000585553.5
ENST00000586346.5
ENST00000591859.5
ENST00000592162.5