RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ABCA8 (Homo sapiens)

Ensembl gene IDs: ENSG00000141338

Ensembl transcript IDs: ENST00000269080.6, ENST00000428549.8, ENST00000430352.6, ENST00000541225.5, ENST00000585531.1, ENST00000585850.1, ENST00000586539.6, ENST00000587206.1, ENST00000588458.1, ENST00000589980.1, ENST00000591459.1, ENST00000615593.4

Found 376 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp AGCCCGCGCACTTTAGCTTCCCTTGGGAGAGAAATACTTTCCTGTCCGCCAGGACTCCGGTCAGCTTGCTaGGATTTTCTAGGTCAGCCA +
Preference number: 2 (lower is better)
Translates to: SPRTLASLGREILSCPPGLRSAC*DFLGQP
Trigger: TGGCTGACCTAGAAAATCTCAGCAAGCTGACCGGAG...TCCTGGCGGACAGGAAAGTATTTCTCTCCCAAGGGAAGCTAAAGTGCGCGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
3UTR-3UTR TCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTTGCCTCTGTCCACACTaGCATGGCACTTACCCAGCA +
Preference number: 2 (lower is better)
Translates to: FSIIQNNGTSMACRDTEACLCPH*HGTYPA
Trigger: TGCTGGGTAAGTGCCATGTCAGTGTGGACAGAGGCA...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
3UTR-3UTR TCA 90 bp CCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCATCCAACAGGAAAATCTaGGGATCTCCTAAAATGGCA +
Preference number: 2 (lower is better)
Translates to: PSQQAFQCRQLFPLVLLPSNRKI*GSPKMA
Trigger: TGCCATTTTAGGAGATCCTCAGATTTTCCTGTTGGA...TGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615593.4
3UTR-3UTR GCA 90 bp TCCAGGAGCAAGGAAATACAAATGAGGAGAAAGTTCCCAGGTGTAACTGTTTTGTCACGCGGTCTGTTTTaGGTTCTTTCAGAAGGTTCC +
Preference number: 2 (lower is better)
Translates to: SRSKEIQMRRKFPGVTVLSRGLF*VLSEGS
Trigger: GGAACCTTCTGAAAGAACGCAAAACAGACCGCGTGA...CAAAACAGTTACACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGCTCCTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615593.4
3UTR-3UTR GCA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATGCGAACCCTTGCAATTaGGCAGATTTGCTGTCGCCA +
Preference number: 2 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINANPCN*ADLLSP
Trigger: TGGCGACAGCAAATCTGCGCAATTGCAAGGGTTCGC...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
3UTR-3UTR CCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGACTGTCCACACTGACATaGCACTTACCCAGCACCCGA +
Preference number: 2 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRLSTLT*HLPSTR
Trigger: TCGGGTGCTGGGTAAGTGCCATGTCAGTGTGGACAG...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
3UTR-3UTR TCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAATGCCTCTGTCCACACTaGCATGGCACTTACCCAGCA +
Preference number: 2 (lower is better)
Translates to: LFHIFYLLSHVSCCYICECLCPH*HGTYPA
Trigger: TGCTGGGTAAGTGCCATGTCAGTGTGGACAGAGGCA...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
3UTR-3UTR TCA 90 bp GGACTTGTTCCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTATATTGTTATAGATGGTaGCTGAACCTTTGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: GLVPSQQAFQCRQLFPLVYCYRW*LNLWWE
Trigger: TTCCCACCAAAGGTTCAGTCACCATCTATAACAATA...TACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615593.4
3UTR-3UTR CCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAACTGTCCACACTGACATaGCACTTACCCAGCACCCGA +
Preference number: 2 (lower is better)
Translates to: LFHIFYLLSHVSCCYICELSTLT*HLPSTR
Trigger: TCGGGTGCTGGGTAAGTGCCATGTCAGTGTGGACAG...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
3UTR-3UTR CCA 90 bp GGACTTGTTCCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTATTTTGGCTGATAATTTaGCATCAGGGATGTGCTGTT +
Preference number: 2 (lower is better)
Translates to: GLVPSQQAFQCRQLFPLVFWLII*HQGCAV
Trigger: AACAGCACATCCCTGATGCCAAATTATCAGCCAAAA...TACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
3UTR-3UTR TCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCGAGATACAGAGGCTGTaGGAGGAGGTTGGCTTAGTC +
Preference number: 2 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIEIQRL*EEVGLV
Trigger: GACTAAGCCAACCTCCTCTCACAGCCTCTGTATCTC...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
3UTR-3UTR TCA 90 bp TCCAGGAGCAAGGAAATACAAATGAGGAGAAAGTTCCCAGGTGTAACTGTTTTGAACTGCAAGCTTAAGTaGTATCCAATCCCCCATTTC +
Preference number: 2 (lower is better)
Translates to: SRSKEIQMRRKFPGVTVLNCKLK*YPIPHF
Trigger: GAAATGGGGGATTGGATATCACTTAAGCTTGCAGTT...CAAAACAGTTACACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGCTCCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
3UTR-3UTR GCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAAGGAACCAGTATGGCCTaGAGAGATACAGAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEGTSMA*RDTEAV
Trigger: CACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCC...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
3UTR-3UTR CCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGCTGTGAGAGGAGGTTaGCTTAGTCAAATGCCTCTG +
Preference number: 2 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRAVRGG*LSQMPL
Trigger: CAGAGGCATTTGACTAAGCCAACCTCCTCTCACAGC...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
3UTR CAA 90 bp TTGTTCCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTaGTACTTCTCCCAAAATAGCAATGTCCGATTCATTAATTGTAGA +
Preference number: 2 (lower is better)
Translates to: LFHLNKPFSVVSFFR*YFSQNSNVRFINCR
Trigger: TCTACAATTAATGAATCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
3UTR-3UTR CCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAAACAATGGAACCAGTATaGCCTGCAGAGATACAGAGG +
Preference number: 2 (lower is better)
Translates to: LFHIFYLLSHVSCCYICETMEPV*PAEIQR
Trigger: CCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGT...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
3UTR CAA 90 bp AGCAAGGAAATACAAATGAGGAGAAAGTTCCCAGGTGTAACTGTTTaGATATATTTTCACCATGGTATACTCCACAAGAAGAGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: SKEIQMRRKFPGVTV*IYFHHGILHKKRAK
Trigger: TTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAAAATATATCAAAACAGTTACACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
3UTR TCA 72 bp GAGGAGGTTGGCTTAGTCAAATGCCTCTGTCCACACTaGCATGGCACTTACCCAGCACCCGAACCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: EEVGLVKCLCPH*HGTYPAPEPPP
Trigger: AGGAGGAGGTTCGGGTGCTGGGTAAGTGCCATGTCAGTGTGGACAGAGGCATTTGACTAAGCCAACCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
3UTR CCA 72 bp ATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTTaGCTTAGTCAAATGCCTCTGTCCACACTGACATGG +
Preference number: 3 (lower is better)
Translates to: MACRDTEAVRGG*LSQMPLSTLTW
Trigger: CCATGTCAGTGTGGACAGAGGCATTTGACTAAGCCAACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
3UTR TCA 72 bp ATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTaGGAGGAGGTTGGCTTAGTCAAATGCCTCTGTCCA +
Preference number: 3 (lower is better)
Translates to: MEPVWPAEIQRL*EEVGLVKCLCP
Trigger: TGGACAGAGGCATTTGACTAAGCCAACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
3UTR-3UTR CAA 90 bp CCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCACAAACTCCGGTCAGCTaGCTGAGATTTTCTAGGTCA +
Preference number: 3 (lower is better)
Translates to: PSQQAFQCRQLFPLVLLPQTPVS*LRFSRS
Trigger: TGACCTAGAAAATCTCAGCAAGCTGACCGGAGTTTG...TGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
3UTR-3UTR CAA 90 bp CCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAATCACGCGGTCTGTTTaGCGTTCTTTCAGAAGGTTC +
Preference number: 3 (lower is better)
Translates to: PSQQAFQCRQLFPLVLLPITRSV*RSFRRF
Trigger: GAACCTTCTGAAAGAACGCAAAACAGACCGCGTGAT...TGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615593.4
3UTR-3UTR CAA 90 bp TTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAAATAGCAATGTCCGAATGGTGACTGAACCTTaGGTGGGAACAGACAACCCA +
Preference number: 3 (lower is better)
Translates to: FSVVSFFRLYFSQNSNVRMVTEP*VGTDNP
Trigger: TGGGTTGTCTGTTCCCACCAAAGGTTCAGTCACCAT...TCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
3UTR GCA 72 bp AACTTTAACAAGCGAACCCTTGCAATTGCGCAGATTTaGTGTCGCCAGAGAGCCACACCACCTATTGTCTTT +
Preference number: 3 (lower is better)
Translates to: NFNKRTLAIAQI*CRQRATPPIVF
Trigger: AAAGACAATAGGTGGTGTGGCTCTCTGGCGACAGCAAATCTGCGCAATTGCAAGGGTTCGCTTGTTAAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615593.4
3UTR-3UTR CAA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATTTCCAGCAGAACCCTTaGTATCTCTTTATCCACTTC +
Preference number: 3 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINFQQNP*YLFIHF
Trigger: GAAGTGGATAAAGAGATACAAAGGGTTCTGCTGGAA...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTGGAGAGCCAGAACGCTaGATCCCGAAGACCCATCAT +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGGEPER*IPKTHH
Trigger: ATGATGGGTCTTCGGGATTCAGCGTTCTGGCTCTCC...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTCTCCGGTCAGCTTGCTaGGATTTTCTAGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGLRSAC*DFLGQP
Trigger: TGGCTGACCTAGAAAATCTCAGCAAGCTGACCGGAG...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTCAAGACCTCTTTACCTaGCAGGAAGGGAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGQDLFT*QEGSRG
Trigger: GCCTCTACTCCCTTCCTGGCAGGTAAAGAGGTCTTG...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp AGCCCGCGCACTTTAGCTTCCCTTGGGAGAGAAATACTTTCCTGTCCGCCAGGATCACGCGGTCTGTTTTaGGTTCTTTCAGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: SPRTLASLGREILSCPPGSRGLF*VLSEGS
Trigger: GGAACCTTCTGAAAGAACGCAAAACAGACCGCGTGA...TCCTGGCGGACAGGAAAGTATTTCTCTCCCAAGGGAAGCTAAAGTGCGCGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR GCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGGCCCGGATGGCCTaGCACATTTGCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAVARMA*HICCCP
Trigger: GGGGCAGCAGCAAATGTGGCAGGCCATCCGGGCCAC...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTGGAACCAGTATGGCCTaGAGAGATACAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGGTSMA*RDTEAV
Trigger: CACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCC...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp AGCCCGCGCACTTTAGCTTCCCTTGGGAGAGAAATACTTTCCTGTCCGCCAGGAAAGGCCCAAGTTTGTTaGCACACACTGATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SPRTLASLGREILSCPPGKAQVC*HTLIFL
Trigger: GAGAAAGATCAGTGTGTGTCAACAAACTTGGGCCTT...TCCTGGCGGACAGGAAAGTATTTCTCTCCCAAGGGAAGCTAAAGTGCGCGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTCATCGATGCTGCTCATaGCAATGTAAGGTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGHRCCS*QCKVGN
Trigger: GTTGCCCACCTTACATTGCCATGAGCAGCATCGATG...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTGCTGTGAGAGGAGGTTaGCTTAGTCAAATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGAVRGG*LSQMPL
Trigger: CAGAGGCATTTGACTAAGCCAACCTCCTCTCACAGC...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAGGAGAGCCAGAACGCTaGATCCCGAAGACCCATCAT +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIGEPER*IPKTHH
Trigger: ATGATGGGTCTTCGGGATTCAGCGTTCTGGCTCTCC...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTGAGCCGTCCGATGGATaGGGAAATGCATTAGAATTC +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGEPSDG*GNALEF
Trigger: GAATTCTAATGCATTTCCTCATCCATCGGACGGCTC...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp CCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCACTCCGGTCAGCTTGCTaGGATTTTCTAGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PSQQAFQCRQLFPLVLLPLRSAC*DFLGQP
Trigger: TGGCTGACCTAGAAAATCTCAGCAAGCTGACCGGAG...TGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTCACTTTCGAAGATACTaGACGCAAATCCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGHFRRY*TQIQPQ
Trigger: CTGTGGCTGGATTTGCGTTCAGTATCTTCGAAAGTG...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATACATCCACTAACCGTGTaGTGGCAACCTCAGCATCCC +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIHPLTV*WQPQHP
Trigger: GGGATGCTGAGGTTGCCATCACACGGTTAGTGGATG...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp CCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCACAAGACCTCTTTACCTaGCAGGAAGGGAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: PSQQAFQCRQLFPLVLLPQDLFT*QEGSRG
Trigger: GCCTCTACTCCCTTCCTGGCAGGTAAAGAGGTCTTG...TGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR GCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTGCTGTATGGTCCTTGTaGTCCTTCTTTGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGAVWSL*SFFAGI
Trigger: AATGCCAGCAAAGAAGGAGCACAAGGACCATACAGC...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTTGCCAGGAATCCGATTaGATTGTCCTGTCCATTCTC +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGCQESD*IVLSIL
Trigger: GAGAATGGACAGGACAATCCAATCGGATTCCTGGCA...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTAAGGCCCAAGTTTGTTaGCACACACTGATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGKAQVC*HTLIFL
Trigger: GAGAAAGATCAGTGTGTGTCAACAAACTTGGGCCTT...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp AGCCCGCGCACTTTAGCTTCCCTTGGGAGAGAAATACTTTCCTGTCCGCCAGGATCTCATCTTGTTAAGTaGAGAGAGGACTTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SPRTLASLGREILSCPPGSHLVK*REDLFH
Trigger: ATGGAACAAGTCCTCTCTTCACTTAACAAGATGAGA...TCCTGGCGGACAGGAAAGTATTTCTCTCCCAAGGGAAGCTAAAGTGCGCGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAGAGATACAGAGGCTGTaGGAGGAGGTTGGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIEIQRL*EEVGLV
Trigger: GACTAAGCCAACCTCCTCTCACAGCCTCTGTATCTC...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTACCTACTCAGTCATGTaGGCTGTTGCTACATTTGTG +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGTYSVM*AVATFV
Trigger: CACAAATGTAGCAACAGCTCACATGACTGAGTAGGT...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGTGGCCCGGATGGCCTaGCACATTTGCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRVARMA*HICCCP
Trigger: GGGGCAGCAGCAAATGTGGCAGGCCATCCGGGCCAC...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAGGAACCAGTATGGCCTaGAGAGATACAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIGTSMA*RDTEAV
Trigger: CACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCC...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp CCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAATCCACTCCAAGGATaGAGGCCGGTGAGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: PSQQAFQCRQLFPLVLLPNPLQG*RPVRKD
Trigger: ATCTTTCCTCACCGGCCTGCATCCTTGGAGTGGATT...TGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTTCCAAGTGTAAAAGCTaGGCCATTCCAAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGSKCKS*AIPSMK
Trigger: CTTCATGCTTGGAATGGCCCAGCTTTTACACTTGGA...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGGAGAGCCAGAACGCTaGATCCCGAAGACCCATCAT +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAGEPER*IPKTHH
Trigger: ATGATGGGTCTTCGGGATTCAGCGTTCTGGCTCTCC...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATATGCTACAATGAGATTTaGGCCGTCCGATGGATGAGG +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNICYNEI*AVRWMR
Trigger: CCTCATCCATCGGACGGCTCAAATCTCATTGTAGCA...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTAATTTGTTGCTACAATaGGATTTGAGCCGTCCGATG +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGNLLLQ*DLSRPM
Trigger: CATCGGACGGCTCAAATCTCATTGTAGCAACAAATT...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTTCCAACAGGAAAATCTaGGGATCTCCTAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGSNRKI*GSPKMA
Trigger: TGCCATTTTAGGAGATCCTCAGATTTTCCTGTTGGA...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTAAAGTAAATCGCCAATaGCAGATAGAGGCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGKVNRQ*QIEASV
Trigger: GACACTTGCCTCTATCTGGCATTGGCGATTTACTTT...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAAATAGCAATGTCCGAGCGAACCCTTGCAATTaGGCAGATTTGCTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: FSVVSFFRLYFSQNSNVRANPCN*ADLLSP
Trigger: TGGCGACAGCAAATCTGCGCAATTGCAAGGGTTCGC...TCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR GCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCGTGGCCCGGATGGCCTaGCACATTTGCTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIVARMA*HICCCP
Trigger: GGGGCAGCAGCAAATGTGGCAGGCCATCCGGGCCAC...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAGCTTGGGCTAAAGGTTaGACATCTTCCACTGGCAAC +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIAWAKG*TSSTGN
Trigger: GTTGCCAGTGGAAGATGTGCAACCTTTAGCCCAAGC...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTAATACTTTCCTCATCTaGCAGTCCCAAGACCTCTTT +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGNTFLI*QSQDLF
Trigger: AAAGAGGTCTTGGGACTGCCAGATGAGGAAAGTATT...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTCTGTCCACACTGACATaGCACTTACCCAGCACCCGA +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEALSTLT*HLPSTR
Trigger: TCGGGTGCTGGGTAAGTGCCATGTCAGTGTGGACAG...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTGTATGGTTTATCCACTaGGCTCCTTGTTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGVWFIH*APCLEE
Trigger: TTCTTCTAAACAAGGAGCTCAGTGGATAAACCATAC...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAAATAGCAATGTCCGAGTTGGGTCGTGTTGGTaGCAGGTGTGTATACAACAG +
Preference number: 4 (lower is better)
Translates to: FSVVSFFRLYFSQNSNVRVGSCW*QVCIQQ
Trigger: CTGTTGTATACACACCTGTCACCAACACGACCCAAC...TCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTGTTATAACTCCTGATTaGCCAATGAAGGAATGCATC +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGVITPD*PMKECI
Trigger: GATGCATTCCTTCATTGGTCAATCAGGAGTTATAAC...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTCTGTACAGTGATGTaGACCCCAGACACCCCCAAA +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAVCTVM*TPDTPK
Trigger: TTTGGGGGTGTCTGGGGTTCACATCACTGTACAGAC...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAGAGCCGTCCGATGGATaGGGAAATGCATTAGAATTC +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIEPSDG*GNALEF
Trigger: GAATTCTAATGCATTTCCTCATCCATCGGACGGCTC...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTTATTGTTATAGATGGTaGCTGAACCTTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGYCYRW*LNLWWE
Trigger: TTCCCACCAAAGGTTCAGTCACCATCTATAACAATA...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGAGATACAGAGGCTGTaGGAGGAGGTTGGCTTAGTC +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAEIQRL*EEVGLV
Trigger: GACTAAGCCAACCTCCTCTCACAGCCTCTGTATCTC...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp CCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCACAGCACTTAAAAGGGTaGTCTGGGAGATTCCTGATA +
Preference number: 4 (lower is better)
Translates to: PSQQAFQCRQLFPLVLLPQHLKG*SGRFLI
Trigger: TATCAGGAATCTCCCAGATCACCCTTTTAAGTGCTG...TGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp GGACTTGTTCCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTAAAGGATGCAGGCCGGTaGGGAAAGATTTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: GLVPSQQAFQCRQLFPLVKDAGR*GKISLP
Trigger: TGGTAAAGAAATCTTTCCTCACCGGCCTGCATCCTT...TACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR GCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTCAAGACCTCTTTACCTaGCAGGAAGGGAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAQDLFT*QEGSRG
Trigger: GCCTCTACTCCCTTCCTGGCAGGTAAAGAGGTCTTG...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATATCACGCGGTCTGTTTTaGGTTCTTTCAGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNISRGLF*VLSEGS
Trigger: GGAACCTTCTGAAAGAACGCAAAACAGACCGCGTGA...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGCAATTGCGCAGATTTaGTGTCGCCAGAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAAIAQI*CRQRAT
Trigger: TGTGGCTCTCTGGCGACAGCAAATCTGCGCAATTGC...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTTATAATCATCGATGCTaGTCATGGCAATGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGYNHRC*SWQCKV
Trigger: CACCTTACATTGCCATGAGCAGCATCGATGATTATA...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTTTATTCATTATCTGTTaGGTCGTGTTGGTGACAGGT +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGLFIIC*VVLVTG
Trigger: ACCTGTCACCAACACGACCCAACAGATAATGAATAA...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTTTTTGGCTGATAATTTaGCATCAGGGATGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGFWLII*HQGCAV
Trigger: AACAGCACATCCCTGATGCCAAATTATCAGCCAAAA...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTTTGCACATCTTCCACTaGCAACTTATAAACCATCAG +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGLHIFH*QLINHQ
Trigger: CTGATGGTTTATAAGTTGCCAGTGGAAGATGTGCAA...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAACAATGGAACCAGTATaGCCTGCAGAGATACAGAGG +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNITMEPV*PAEIQR
Trigger: CCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATGGAGAGCCAGAACGCTaGATCCCGAAGACCCATCAT +
Preference number: 4 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINGEPER*IPKTHH
Trigger: ATGATGGGTCTTCGGGATTCAGCGTTCTGGCTCTCC...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTACACGACCAGGCCGGTaGGGAAAGATTTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEATRPGR*GKISLP
Trigger: TGGTAAAGAAATCTTTCCTCACCGGCCTGGTCGTGT...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAAATAGCAATGTCCGAGAGCCGTCCGATGGATaGGGAAATGCATTAGAATTC +
Preference number: 4 (lower is better)
Translates to: FSVVSFFRLYFSQNSNVREPSDG*GNALEF
Trigger: GAATTCTAATGCATTTCCTCATCCATCGGACGGCTC...TCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp TCCAGGAGCAAGGAAATACAAATGAGGAGAAAGTTCCCAGGTGTAACTGTTTTGTGCTACAATGAGATTTaGGCCGTCCGATGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SRSKEIQMRRKFPGVTVLCYNEI*AVRWMR
Trigger: CCTCATCCATCGGACGGCTCAAATCTCATTGTAGCA...CAAAACAGTTACACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGCTCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp CCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAACTGCAAGCTTAAGTaGTATCCAATCCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: PSQQAFQCRQLFPLVLLPNCKLK*YPIPHF
Trigger: GAAATGGGGGATTGGATATCACTTAAGCTTGCAGTT...TGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAACCTACTCAGTCATGTaGGCTGTTGCTACATTTGTG +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNITYSVM*AVATFV
Trigger: CACAAATGTAGCAACAGCTCACATGACTGAGTAGGT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTTCTTATAATCATCGATaGTGCTCATGGCAATGTAAG +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGSYNHR*CSWQCK
Trigger: CTTACATTGCCATGAGCAGCATCGATGATTATAAGA...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTAGTCATGTGAGCTGTTaGTACATTTGTGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGSHVSC*YICELS
Trigger: AGAAAGTTCACAAATGTAGCAACAGCTCACATGACT...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp GGACTTGTTCCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTATCCAAGTGTAAAAGCTaGGCCATTCCAAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: GLVPSQQAFQCRQLFPLVSKCKS*AIPSMK
Trigger: CTTCATGCTTGGAATGGCCCAGCTTTTACACTTGGA...TACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTCATCGATGCTGCTCATaGCAATGTAAGGTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAHRCCS*QCKVGN
Trigger: GTTGCCCACCTTACATTGCCATGAGCAGCATCGATG...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGCTGTGAGAGGAGGTTaGCTTAGTCAAATGCCTCTG +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAAVRGG*LSQMPL
Trigger: CAGAGGCATTTGACTAAGCCAACCTCCTCTCACAGC...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp CCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCACTTAAAAGGGTGATCTaGGAGATTCCTGATAGAGGA +
Preference number: 4 (lower is better)
Translates to: PSQQAFQCRQLFPLVLLPLKRVI*EIPDRG
Trigger: TCCTCTATCAGGAATCTCCCAGATCACCCTTTTAAG...TGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAAATTTGTTGCTACAATaGGATTTGAGCCGTCCGATG +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNINLLLQ*DLSRPM
Trigger: CATCGGACGGCTCAAATCTCATTGTAGCAACAAATT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATATGTTCAAAAGAGTCATaGAATGAAGGATCGGCATCC +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNICSKES*NEGSAS
Trigger: GGATGCCGATCCTTCATTTCATGACTCTTTTGAACA...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAAACTGCAAGCTTAAGTaGTATCCAATCCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNINCKLK*YPIPHF
Trigger: GAAATGGGGGATTGGATATCACTTAAGCTTGCAGTT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAAATAGCAATGTCCGAGCAAGGAAATACAAATaGGGAGAAAGTTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FSVVSFFRLYFSQNSNVRARKYK*GESSQV
Trigger: CACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGC...TCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp TTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAAATAGCAATGTCCGATTGATGATCAGTAGTTaGGTGAGAGGGTCATGTGGT +
Preference number: 4 (lower is better)
Translates to: FSVVSFFRLYFSQNSNVRLMISS*VRGSCG
Trigger: ACCACATGACCCTCTCACTCAACTACTGATCATCAA...TCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp CCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCACATTACAACACACTGTaGTGGCTCCATTATAAGATG +
Preference number: 4 (lower is better)
Translates to: PSQQAFQCRQLFPLVLLPHYNTL*WLHYKM
Trigger: CATCTTATAATGGAGCCATCACAGTGTGTTGTAATG...TGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTCACTTTCGAAGATACTaGACGCAAATCCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAHFRRY*TQIQPQ
Trigger: CTGTGGCTGGATTTGCGTTCAGTATCTTCGAAAGTG...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATGCCTCTGTCCACACTaGCATGGCACTTACCCAGCA +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRCLCPH*HGTYPA
Trigger: TGCTGGGTAAGTGCCATGTCAGTGTGGACAGAGGCA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTAGATCTTATAACAAGTaGCAAGAAAAGGGCCATAAT +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGRSYNK*QEKGHN
Trigger: ATTATGGCCCTTTTCTTGGCACTTGTTATAAGATCT...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp GGACTTGTTCCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTAAAAGTAAATCGCCAATaGCAGATAGAGGCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: GLVPSQQAFQCRQLFPLVKVNRQ*QIEASV
Trigger: GACACTTGCCTCTATCTGGCATTGGCGATTTACTTT...TACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR GCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAACTGTGACCAAGTATTaGAGTGATTTGGCCTTCGTA +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNITVTKY*SDLAFV
Trigger: TACGAAGGCCAAATCACTGCAATACTTGGTCACAGT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATGCAATTGCGCAGATTTaGTGTCGCCAGAGAGCCACA +
Preference number: 4 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINAIAQI*CRQRAT
Trigger: TGTGGCTCTCTGGCGACAGCAAATCTGCGCAATTGC...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CCA 90 bp GGACTTGTTCCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTAAATACTTTCCTCATCTaGCAGTCCCAAGACCTCTTT +
Preference number: 4 (lower is better)
Translates to: GLVPSQQAFQCRQLFPLVNTFLI*QSQDLF
Trigger: AAAGAGGTCTTGGGACTGCCAGATGAGGAAAGTATT...TACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CCA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTTCATGGTGTTACCTGTaGATATGTTATCAACGATAT +
Preference number: 4 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGSWCYL*ICYQRY
Trigger: ATATCGTTGATAACATATCCACAGGTAACACCATGA...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAGTATGGTTTATCCACTaGGCTCCTTGTTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIVWFIH*APCLEE
Trigger: TTCTTCTAAACAAGGAGCTCAGTGGATAAACCATAC...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATACTCCTGATTGACCAATaGAGGAATGCATCTTCATAT +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNILLIDQ*RNASSY
Trigger: ATATGAAGATGCATTCCTTCATTGGTCAATCAGGAG...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp GGACTTGTTCCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTAGTTATAACTCCTGATTaGCCAATGAAGGAATGCATC +
Preference number: 4 (lower is better)
Translates to: GLVPSQQAFQCRQLFPLVVITPD*PMKECI
Trigger: GATGCATTCCTTCATTGGTCAATCAGGAGTTATAAC...TACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGTCTGTACAGTGATGTaGACCCCAGACACCCCCAAA +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRVCTVM*TPDTPK
Trigger: TTTGGGGGTGTCTGGGGTTCACATCACTGTACAGAC...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGCAAGGAAATACAAATaGGGAGAAAGTTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAARKYK*GESSQV
Trigger: CACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGC...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTTTGATGATCAGTAGTTaGGTGAGAGGGTCATGTGGT +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEALMISS*VRGSCG
Trigger: ACCACATGACCCTCTCACTCAACTACTGATCATCAA...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATACATTACAACACACTGTaGTGGCTCCATTATAAGATG +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIHYNTL*WLHYKM
Trigger: CATCTTATAATGGAGCCATCACAGTGTGTTGTAATG...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAAGTTCGGATATGTACTaGTGGTTTAACCATTCCAAG +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNISSDMY*WFNHSK
Trigger: CTTGGAATGGTTAAACCATCAGTACATATCCGAACT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAGGTTCTTCTGGATTTTaGCACACATCACTACTTCTT +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIGSSGF*HTSLLL
Trigger: AAGAAGTAGTGATGTGTGTCAAAATCCAGAAGAACC...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269080.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTACCTACTCAGTCATGTaGGCTGTTGCTACATTTGTG +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEATYSVM*AVATFV
Trigger: CACAAATGTAGCAACAGCTCACATGACTGAGTAGGT...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAAATAGCAATGTCCGATCCAACAGGAAAATCTaGGGATCTCCTAAAATGGCA +
Preference number: 4 (lower is better)
Translates to: FSVVSFFRLYFSQNSNVRSNRKI*GSPKMA
Trigger: TGCCATTTTAGGAGATCCTCAGATTTTCCTGTTGGA...TCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR GCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAGAGGCAAGTGTCAAATaGCAACATGAAATTTGTTGC +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIEASVK*QHEICC
Trigger: GCAACAAATTTCATGTTGGCATTTGACACTTGCCTC...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGCGAACCCTTGCAATTaGGCAGATTTGCTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRANPCN*ADLLSP
Trigger: TGGCGACAGCAAATCTGCGCAATTGCAAGGGTTCGC...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAAAAGCTATGTTCTGGTaGTCCACAGACTGTATAAAG +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIKAMFW*STDCIK
Trigger: CTTTATACAGTCTGTGGAGCACCAGAACATAGCTTT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATACCAGAACATGATATATaGCAGGAATCCGATTGGATT +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIPEHDI*QESDWI
Trigger: AATCCAATCGGATTCCTGGCATATATCATGTTCTGG...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAAGCTCCAGGAAAACCTaGTCCAGGGTAGACTGTGAG +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRSSRKT*SRVDCE
Trigger: CTCACAGTCTACCCTGGAGCAGGTTTTCCTGGAGCT...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGAACCAGTATGGCCTaGAGAGATACAGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRGTSMA*RDTEAV
Trigger: CACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCC...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAAATAGCAATGTCCGACACTGTGACCAATATTaGAGTGATTTGGCCTTCGTA +
Preference number: 4 (lower is better)
Translates to: FSVVSFFRLYFSQNSNVRHCDQY*SDLAFV
Trigger: TACGAAGGCCAAATCACTGCAATATTGGTCACAGTG...TCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATATCCTCATCTTGTTTCTaGGAAAATGGAAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNISSSCF*ENGSKE
Trigger: TTCCTTGCTTCCATTTTCCCAGAAACAAGATGAGGA...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269080.6
ENST00000430352.6
CDS-3UTR CCA 90 bp GGACTTGTTCCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTATCCTCATCTTGTTTCTaGGAAAATGGAAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: GLVPSQQAFQCRQLFPLVSSSCF*ENGSKE
Trigger: TTCCTTGCTTCCATTTTCCCAGAAACAAGATGAGGA...TACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CCA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATAGTGAGAGGGTCATGTaGTTGTTGTCCAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINSERVM*LLSRSK
Trigger: CTTGCTCCTGGACAACAACCACATGACCCTCTCACT...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATATCCTTCTGGTTCTTCTaGATTTTGACACACATCACT +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNISFWFF*ILTHIT
Trigger: AGTGATGTGTGTCAAAATCCAGAAGAACCAGAAGGA...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAGCTGGCAATGATGACTaGCTTCTCATCAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIAGNDD*LLIKIS
Trigger: ACTAATTTTGATGAGAAGCCAGTCATCATTGCCAGC...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCCTGTCCACACTGACATaGCACTTACCCAGCACCCGA +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDILSTLT*HLPSTR
Trigger: TCGGGTGCTGGGTAAGTGCCATGTCAGTGTGGACAG...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATATATTATACAGAACAATaGAACCAGTATGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIYYTEQ*NQYGLQ
Trigger: CTGCAGGCCATACTGGTTCCATTGTTCTGTATAATA...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAAATAGCAATGTCCGAGTATGGTTTATCCACTaGGCTCCTTGTTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: FSVVSFFRLYFSQNSNVRVWFIH*APCLEE
Trigger: TTCTTCTAAACAAGGAGCTCAGTGGATAAACCATAC...TCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGTTGGGTCGTGTTGGTaGCAGGTGTGTATACAACAG +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRVGSCW*QVCIQQ
Trigger: CTGTTGTATACACACCTGTCACCAACACGACCCAAC...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAACACGACCAGGCCGGTaGGGAAAGATTTCTTTACCA +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRTRPGR*GKISLP
Trigger: TGGTAAAGAAATCTTTCCTCACCGGCCTGGTCGTGT...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAAGTCTGTACAGTGATGTaGACCCCAGACACCCCCAAA +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEVCTVM*TPDTPK
Trigger: TTTGGGGGTGTCTGGGGTTCACATCACTGTACAGAC...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATGCTACAATGAGATTTaGGCCGTCCGATGGATGAGG +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRCYNEI*AVRWMR
Trigger: CCTCATCCATCGGACGGCTCAAATCTCATTGTAGCA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TCCAGGAGCAAGGAAATACAAATGAGGAGAAAGTTCCCAGGTGTAACTGTTTTGAATTTGTTGCTACAATaGGATTTGAGCCGTCCGATG +
Preference number: 4 (lower is better)
Translates to: SRSKEIQMRRKFPGVTVLNLLLQ*DLSRPM
Trigger: CATCGGACGGCTCAAATCTCATTGTAGCAACAAATT...CAAAACAGTTACACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGCTCCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAACTCCGGTCAGCTTGCTaGGATTTTCTAGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICELRSAC*DFLGQP
Trigger: TGGCTGACCTAGAAAATCTCAGCAAGCTGACCGGAG...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAAATAGCAATGTCCGAAGTTCGGATATGTACTaGTGGTTTAACCATTCCAAG +
Preference number: 4 (lower is better)
Translates to: FSVVSFFRLYFSQNSNVRSSDMY*WFNHSK
Trigger: CTTGGAATGGTTAAACCATCAGTACATATCCGAACT...TCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAAGGATCCTTTCTCATTaGTTTCTTTCCAAACTTCCA +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIRILSH*FLSKLP
Trigger: TGGAAGTTTGGAAAGAAATCAATGAGAAAGGATCCT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGATTTAAAAGTCCAGTaGAAATGGCACACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEADLKVQ*KWHTVG
Trigger: GCCAACTGTGTGCCATTTTCACTGGACTTTTAAATC...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTACTGTGACCAAGTATTaGAGTGATTTGGCCTTCGTA +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEATVTKY*SDLAFV
Trigger: TACGAAGGCCAAATCACTGCAATACTTGGTCACAGT...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCGCGAACCCTTGCAATTaGGCAGATTTGCTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIANPCN*ADLLSP
Trigger: TGGCGACAGCAAATCTGCGCAATTGCAAGGGTTCGC...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATATCTTATAATCATCGATaGTGCTCATGGCAATGTAAG +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNISYNHR*CSWQCK
Trigger: CTTACATTGCCATGAGCAGCATCGATGATTATAAGA...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCAGCTCCAGGAAAACCTaGTCCAGGGTAGACTGTGAG +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDISSRKT*SRVDCE
Trigger: CTCACAGTCTACCCTGGAGCAGGTTTTCCTGGAGCT...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAAGTCATGTGAGCTGTTaGTACATTTGTGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNISHVSC*YICELS
Trigger: AGAAAGTTCACAAATGTAGCAACAGCTCACATGACT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp CCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAGATATATTTTCACCATaGTATACTCCACAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PSQQAFQCRQLFPLVLLPDIFSP*YTPQEE
Trigger: CTCTTCTTGTGGAGTATACCATGGTGAAAATATATC...TGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAAGTGAGAGGGTCATGTaGTTGTTGTCCAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRSERVM*LLSRSK
Trigger: CTTGCTCCTGGACAACAACCACATGACCCTCTCACT...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp CCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAGCAATTCAATCTTTTaGCATTGCATGCTAACGAAA +
Preference number: 4 (lower is better)
Translates to: PSQQAFQCRQLFPLVLLPSNSIF*HCMLTK
Trigger: TTTCGTTAGCATGCAATGCCAAAAGATTGAATTGCT...TGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTCAGGAACACAGAATTTaGGGTTTTAAGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAQEHRI*GFKALP
Trigger: AGGAAGAGCCTTAAAACCCCAAATTCTGTGTTCCTG...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATATTTATGCCTACATCATaGTGTTACCTGTGGATATGT +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIFMPTS*CYLWIC
Trigger: ACATATCCACAGGTAACACCATGATGTAGGCATAAA...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCGTTGGGTCGTGTTGGTaGCAGGTGTGTATACAACAG +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIVGSCW*QVCIQQ
Trigger: CTGTTGTATACACACCTGTCACCAACACGACCCAAC...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTCTCCTGATTGACCAATaGAGGAATGCATCTTCATAT +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEALLIDQ*RNASSY
Trigger: ATATGAAGATGCATTCCTTCATTGGTCAATCAGGAG...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TCCAGGAGCAAGGAAATACAAATGAGGAGAAAGTTCCCAGGTGTAACTGTTTTGCTCCTGATTGACCAATaGAGGAATGCATCTTCATAT +
Preference number: 4 (lower is better)
Translates to: SRSKEIQMRRKFPGVTVLLLIDQ*RNASSY
Trigger: ATATGAAGATGCATTCCTTCATTGGTCAATCAGGAG...CAAAACAGTTACACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGCTCCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGAGCCGTCCGATGGATaGGGAAATGCATTAGAATTC +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYREPSDG*GNALEF
Trigger: GAATTCTAATGCATTTCCTCATCCATCGGACGGCTC...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCTGCTACAATGAGATTTaGGCCGTCCGATGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDICYNEI*AVRWMR
Trigger: CCTCATCCATCGGACGGCTCAAATCTCATTGTAGCA...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTAGTTCGGATATGTACTaGTGGTTTAACCATTCCAAG +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEASSDMY*WFNHSK
Trigger: CTTGGAATGGTTAAACCATCAGTACATATCCGAACT...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGAGGCAAGTGTCAAATaGCAACATGAAATTTGTTGC +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAEASVK*QHEICC
Trigger: GCAACAAATTTCATGTTGGCATTTGACACTTGCCTC...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATCACGCGGTCTGTTTTaGGTTCTTTCAGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRSRGLF*VLSEGS
Trigger: GGAACCTTCTGAAAGAACGCAAAACAGACCGCGTGA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TCCAGGAGCAAGGAAATACAAATGAGGAGAAAGTTCCCAGGTGTAACTGTTTTGAAAGCTATGTTCTGGTaGTCCACAGACTGTATAAAG +
Preference number: 4 (lower is better)
Translates to: SRSKEIQMRRKFPGVTVLKAMFW*STDCIK
Trigger: CTTTATACAGTCTGTGGAGCACCAGAACATAGCTTT...CAAAACAGTTACACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGCTCCTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR GCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTCCAGAACATGATATATaGCAGGAATCCGATTGGATT +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAPEHDI*QESDWI
Trigger: AATCCAATCGGATTCCTGGCATATATCATGTTCTGG...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTTATAATCATCGATGCTaGTCATGGCAATGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAYNHRC*SWQCKV
Trigger: CACCTTACATTGCCATGAGCAGCATCGATGATTATA...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCGCTTGGGCTAAAGGTTaGACATCTTCCACTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIAWAKG*TSSTGN
Trigger: GTTGCCAGTGGAAGATGTGCAACCTTTAGCCCAAGC...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTTTATTCATTATCTGTTaGGTCGTGTTGGTGACAGGT +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEALFIIC*VVLVTG
Trigger: ACCTGTCACCAACACGACCCAACAGATAATGAATAA...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAGATATATTTTCACCATaGTATACTCCACAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIDIFSP*YTPQEE
Trigger: CTCTTCTTGTGGAGTATACCATGGTGAAAATATATC...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCAGTGAGAGGGTCATGTaGTTGTTGTCCAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDISERVM*LLSRSK
Trigger: CTTGCTCCTGGACAACAACCACATGACCCTCTCACT...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTTCTAAAGCTATGTTCTaGTGCTCCACAGACTGTATA +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEASKAMF*CSTDCI
Trigger: TATACAGTCTGTGGAGCACCAGAACATAGCTTTAGA...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATGCCAGGAATCCGATTaGATTGTCCTGTCCATTCTC +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRCQESD*IVLSIL
Trigger: GAGAATGGACAGGACAATCCAATCGGATTCCTGGCA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAACATCGATGCTGCTCATaGCAATGTAAGGTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEHRCCS*QCKVGN
Trigger: GTTGCCCACCTTACATTGCCATGAGCAGCATCGATG...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGCTGGCAATGATGACTaGCTTCTCATCAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAAGNDD*LLIKIS
Trigger: ACTAATTTTGATGAGAAGCCAGTCATCATTGCCAGC...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAACAATGGAACCAGTATaGCCTGCAGAGATACAGAGG +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRTMEPV*PAEIQR
Trigger: CCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGT...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTTATTATACAGAACAATaGAACCAGTATGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAYYTEQ*NQYGLQ
Trigger: CTGCAGGCCATACTGGTTCCATTGTTCTGTATAATA...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTCCATGGTAAGCAGTaGAGAAAAATCATTTACTTG +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAVHGKQ*RKIIYL
Trigger: CAAGTAAATGATTTTTCTTCACTGCTTACCATGGAC...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATTGTTCAAAAGAGTCATaGAATGAAGGATCGGCATCC +
Preference number: 4 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINCSKES*NEGSAS
Trigger: GGATGCCGATCCTTCATTTCATGACTCTTTTGAACA...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGCAAGGAAATACAAATaGGGAGAAAGTTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRARKYK*GESSQV
Trigger: CACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGC...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCCACTTTCGAAGATACTaGACGCAAATCCAGCCACAG +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIHFRRY*TQIQPQ
Trigger: CTGTGGCTGGATTTGCGTTCAGTATCTTCGAAAGTG...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCGCTGTATGGTCCTTGTaGTCCTTCTTTGCTGGCATT +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIAVWSL*SFFAGI
Trigger: AATGCCAGCAAAGAAGGAGCACAAGGACCATACAGC...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATCCAAGTGTAAAAGCTaGGCCATTCCAAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRSKCKS*AIPSMK
Trigger: CTTCATGCTTGGAATGGCCCAGCTTTTACACTTGGA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATTTTCCCTTGGAATTCTaGAGGCGCTTGTTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINFPLEF*RRLFKR
Trigger: TCTTTTGAACAAGCGCCTCCAGAATTCCAAGGGAAA...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAATGCCAGGAATCCGATTaGATTGTCCTGTCCATTCTC +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICECQESD*IVLSIL
Trigger: GAGAATGGACAGGACAATCCAATCGGATTCCTGGCA...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCAAGGCCCAAGTTTGTTaGCACACACTGATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIKAQVC*HTLIFL
Trigger: GAGAAAGATCAGTGTGTGTCAACAAACTTGGGCCTT...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATGTTCAAAAGAGTCATaGAATGAAGGATCGGCATCC +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRCSKES*NEGSAS
Trigger: GGATGCCGATCCTTCATTTCATGACTCTTTTGAACA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATTATTGTTATAGATGGTaGCTGAACCTTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINYCYRW*LNLWWE
Trigger: TTCCCACCAAAGGTTCAGTCACCATCTATAACAATA...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAAACTGCAAGCTTAAGTaGTATCCAATCCCCCATTTC +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRNCKLK*YPIPHF
Trigger: GAAATGGGGGATTGGATATCACTTAAGCTTGCAGTT...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAAGCAAGGAAATACAAATaGGGAGAAAGTTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEARKYK*GESSQV
Trigger: CACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGC...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAATTGATGATCAGTAGTTaGGTGAGAGGGTCATGTGGT +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICELMISS*VRGSCG
Trigger: ACCACATGACCCTCTCACTCAACTACTGATCATCAA...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCTTGATGATCAGTAGTTaGGTGAGAGGGTCATGTGGT +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDILMISS*VRGSCG
Trigger: ACCACATGACCCTCTCACTCAACTACTGATCATCAA...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTAGATCTTATAACAAGTaGCAAGAAAAGGGCCATAAT +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEARSYNK*QEKGHN
Trigger: ATTATGGCCCTTTTCTTGGCACTTGTTATAAGATCT...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TCCAGGAGCAAGGAAATACAAATGAGGAGAAAGTTCCCAGGTGTAACTGTTTTGAGATCTTATAACAAGTaGCAAGAAAAGGGCCATAAT +
Preference number: 4 (lower is better)
Translates to: SRSKEIQMRRKFPGVTVLRSYNK*QEKGHN
Trigger: ATTATGGCCCTTTTCTTGGCACTTGTTATAAGATCT...CAAAACAGTTACACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGCTCCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR GCA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATGAGGCAAGTGTCAAATaGCAACATGAAATTTGTTGC +
Preference number: 4 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINEASVK*QHEICC
Trigger: GCAACAAATTTCATGTTGGCATTTGACACTTGCCTC...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR GCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAACTGTGACCAAGTATTaGAGTGATTTGGCCTTCGTA +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRTVTKY*SDLAFV
Trigger: TACGAAGGCCAAATCACTGCAATACTTGGTCACAGT...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAATCCAAGTGTAAAAGCTaGGCCATTCCAAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICESKCKS*AIPSMK
Trigger: CTTCATGCTTGGAATGGCCCAGCTTTTACACTTGGA...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATTTCCCTTGGAATTCTaGAGGCGCTTGTTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRFPLEF*RRLFKR
Trigger: TCTTTTGAACAAGCGCCTCCAGAATTCCAAGGGAAA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGATATATTTTCACCATaGTATACTCCACAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEADIFSP*YTPQEE
Trigger: CTCTTCTTGTGGAGTATACCATGGTGAAAATATATC...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATTCTAAAGCTATGTTCTaGTGCTCCACAGACTGTATA +
Preference number: 4 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINSKAMF*CSTDCI
Trigger: TATACAGTCTGTGGAGCACCAGAACATAGCTTTAGA...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CCA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTAGCAATTCAATCTTTTaGCATTGCATGCTAACGAAA +
Preference number: 4 (lower is better)
Translates to: FSIIQNNGTSMACRDTEASNSIF*HCMLTK
Trigger: TTTCGTTAGCATGCAATGCCAAAAGATTGAATTGCT...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGACAGGAACACAGAATTTaGGGTTTTAAGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRQEHRI*GFKALP
Trigger: AGGAAGAGCCTTAAAACCCCAAATTCTGTGTTCCTG...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATGTCCATGGTAAGCAGTaGAGAAAAATCATTTACTTG +
Preference number: 4 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINVHGKQ*RKIIYL
Trigger: CAAGTAAATGATTTTTCTTCACTGCTTACCATGGAC...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR TCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCTGTTCAAAAGAGTCATaGAATGAAGGATCGGCATCC +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDICSKES*NEGSAS
Trigger: GGATGCCGATCCTTCATTTCATGACTCTTTTGAACA...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATCTCATCTTGTTAAGTaGAGAGAGGACTTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRSHLVK*REDLFH
Trigger: ATGGAACAAGTCCTCTCTTCACTTAACAAGATGAGA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGTTCTTCTGGATTTTaGCACACATCACTACTTCTT +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRGSSGF*HTSLLL
Trigger: AAGAAGTAGTGATGTGTGTCAAAATCCAGAAGAACC...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269080.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCGATTTAAAAGTCCAGTaGAAATGGCACACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIDLKVQ*KWHTVG
Trigger: GCCAACTGTGTGCCATTTTCACTGGACTTTTAAATC...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAAGATTTAAAAGTCCAGTaGAAATGGCACACAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEDLKVQ*KWHTVG
Trigger: GCCAACTGTGTGCCATTTTCACTGGACTTTTAAATC...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGTTCTTCTGGATTTTaGCACACATCACTACTAAAG +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRGSSGF*HTSLLK
Trigger: CTTTAGTAGTGATGTGTGTCAAAATCCAGAAGAACC...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430352.6
CDS-3UTR GCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCAAAGTAAATCGCCAATaGCAGATAGAGGCAAGTGTC +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIKVNRQ*QIEASV
Trigger: GACACTTGCCTCTATCTGGCATTGGCGATTTACTTT...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATATAATCATCGATGCTaGTCATGGCAATGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRYNHRC*SWQCKV
Trigger: CACCTTACATTGCCATGAGCAGCATCGATGATTATA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATTATTCATTATCTGTTaGGTCGTGTTGGTGACAGGT +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRLFIIC*VVLVTG
Trigger: ACCTGTCACCAACACGACCCAACAGATAATGAATAA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAAAATACTTTCCTCATCTaGCAGTCCCAAGACCTCTTT +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICENTFLI*QSQDLF
Trigger: AAAGAGGTCTTGGGACTGCCAGATGAGGAAAGTATT...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAATTTCCCTTGGAATTCTaGAGGCGCTTGTTCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEFPLEF*RRLFKR
Trigger: TCTTTTGAACAAGCGCCTCCAGAATTCCAAGGGAAA...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATTTTGGCTGATAATTTaGCATCAGGGATGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRFWLII*HQGCAV
Trigger: AACAGCACATCCCTGATGCCAAATTATCAGCCAAAA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATCCTTCTGGTTCTTCTaGATTTTGACACACATCACT +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRSFWFF*ILTHIT
Trigger: AGTGATGTGTGTCAAAATCCAGAAGAACCAGAAGGA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAACAGGAACACAGAATTTaGGGTTTTAAGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEQEHRI*GFKALP
Trigger: AGGAAGAGCCTTAAAACCCCAAATTCTGTGTTCCTG...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAAGTATGGTTTATCCACTaGGCTCCTTGTTTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEVWFIH*APCLEE
Trigger: TTCTTCTAAACAAGGAGCTCAGTGGATAAACCATAC...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAATTTGTTGACACACACTaGTCTTTCTCTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEFVDTH*SFSSSS
Trigger: AGATGAGGAAGAGAAAGATCAGTGTGTGTCAACAAA...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGTCCATGGTAAGCAGTaGAGAAAAATCATTTACTTG +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRVHGKQ*RKIIYL
Trigger: CAAGTAAATGATTTTTCTTCACTGCTTACCATGGAC...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAACTCCTGATTGACCAATaGAGGAATGCATCTTCATAT +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICELLIDQ*RNASSY
Trigger: ATATGAAGATGCATTCCTTCATTGGTCAATCAGGAG...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAAGTTATAACTCCTGATTaGCCAATGAAGGAATGCATC +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEVITPD*PMKECI
Trigger: GATGCATTCCTTCATTGGTCAATCAGGAGTTATAAC...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAATATTGTTATAGATGGTaGCTGAACCTTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEYCYRW*LNLWWE
Trigger: TTCCCACCAAAGGTTCAGTCACCATCTATAACAATA...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCTATTGTTATAGATGGTaGCTGAACCTTTGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIYCYRW*LNLWWE
Trigger: TTCCCACCAAAGGTTCAGTCACCATCTATAACAATA...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCTCTCATCTTGTTAAGTaGAGAGAGGACTTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDISHLVK*REDLFH
Trigger: ATGGAACAAGTCCTCTCTTCACTTAACAAGATGAGA...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAACATTACAACACACTGTaGTGGCTCCATTATAAGATG +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEHYNTL*WLHYKM
Trigger: CATCTTATAATGGAGCCATCACAGTGTGTTGTAATG...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCAGTTCGGATATGTACTaGTGGTTTAACCATTCCAAG +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDISSDMY*WFNHSK
Trigger: CTTGGAATGGTTAAACCATCAGTACATATCCGAACT...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCAAAGCTATGTTCTGGTaGTCCACAGACTGTATAAAG +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIKAMFW*STDCIK
Trigger: CTTTATACAGTCTGTGGAGCACCAGAACATAGCTTT...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAAAAAGCTATGTTCTGGTaGTCCACAGACTGTATAAAG +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEKAMFW*STDCIK
Trigger: CTTTATACAGTCTGTGGAGCACCAGAACATAGCTTT...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAATTTTGGCTGATAATTTaGCATCAGGGATGTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEFWLII*HQGCAV
Trigger: AACAGCACATCCCTGATGCCAAATTATCAGCCAAAA...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCTCCTTCTGGTTCTTCTaGATTTTGACACACATCACT +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDISFWFF*ILTHIT
Trigger: AGTGATGTGTGTCAAAATCCAGAAGAACCAGAAGGA...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCGCTGGCAATGATGACTaGCTTCTCATCAAAATTAGT +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIAGNDD*LLIKIS
Trigger: ACTAATTTTGATGAGAAGCCAGTCATCATTGCCAGC...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCTTGCACATCTTCCACTaGCAACTTATAAACCATCAG +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDILHIFH*QLINHQ
Trigger: CTGATGGTTTATAAGTTGCCAGTGGAAGATGTGCAA...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCTATTATACAGAACAATaGAACCAGTATGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIYYTEQ*NQYGLQ
Trigger: CTGCAGGCCATACTGGTTCCATTGTTCTGTATAATA...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATTTATGCCTACATCATaGTGTTACCTGTGGATATGT +
Preference number: 4 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRFMPTS*CYLWIC
Trigger: ACATATCCACAGGTAACACCATGATGTAGGCATAAA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCGTCCATGGTAAGCAGTaGAGAAAAATCATTTACTTG +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIVHGKQ*RKIIYL
Trigger: CAAGTAAATGATTTTTCTTCACTGCTTACCATGGAC...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR TCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCAGGATCCTTTCTCATTaGTTTCTTTCCAAACTTCCA +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIRILSH*FLSKLP
Trigger: TGGAAGTTTGGAAAGAAATCAATGAGAAAGGATCCT...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR GCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAAAGTCATGTGAGCTGTTaGTACATTTGTGAACTTTCT +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICESHVSC*YICELS
Trigger: AGAAAGTTCACAAATGTAGCAACAGCTCACATGACT...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCTTTATGCCTACATCATaGTGTTACCTGTGGATATGT +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIFMPTS*CYLWIC
Trigger: ACATATCCACAGGTAACACCATGATGTAGGCATAAA...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
3UTR CAA 72 bp ATACAAATGAGGAGAAAGTTCCCAGGTGTAACTGTTTaGATATATTTTCACCATGGTATACTCCACAAGAAG +
Preference number: 4 (lower is better)
Translates to: IQMRRKFPGVTV*IYFHHGILHKK
Trigger: CTTCTTGTGGAGTATACCATGGTGAAAATATATCAAAACAGTTACACCTGGGAACTTTCTCCTCATTTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR GCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCAGATCTTATAACAAGTaGCAAGAAAAGGGCCATAAT +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIRSYNK*QEKGHN
Trigger: ATTATGGCCCTTTTCTTGGCACTTGTTATAAGATCT...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAAGATATATTTTCACCATaGTATACTCCACAAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEDIFSP*YTPQEE
Trigger: CTCTTCTTGTGGAGTATACCATGGTGAAAATATATC...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCAGCAATTCAATCTTTTaGCATTGCATGCTAACGAAA +
Preference number: 4 (lower is better)
Translates to: LCLHHGVTCGYVINDIDISNSIF*HCMLTK
Trigger: TTTCGTTAGCATGCAATGCCAAAAGATTGAATTGCT...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CCA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAATCATGGTGTTACCTGTaGATATGTTATCAACGATAT +
Preference number: 4 (lower is better)
Translates to: LFHIFYLLSHVSCCYICESWCYL*ICYQRY
Trigger: ATATCGTTGATAACATATCCACAGGTAACACCATGA...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS CCA 90 bp GCCCAGGTGCTGTTGCAACCCTGCTGGGTGTGTACGTGCCCAGGGTaGAACTGCCATGCCAGCCTCCTGCCACCTCAGCTCGCTCTGGAT +
Preference number: 5 (lower is better)
Translates to: AQVLLQPCWVCTCPG*NCHASLLPPQLALD
Trigger: ATCCAGAGCGAGCTGAGGTGGCAGGAGGCTGGCATGGCAGTTCCACCCTGGGCACGTACACACCCAGCAGGGTTGCAACAGCACCTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 90 bp GCTGGGTGTGTACGTGCCCAGGGTGGAACTGCCATGCCAGCCTCCTaGCACCTCAGCTCGCTCTGGATTTTGGGCCCTGACAAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: AGCVRAQGGTAMPAS*HLSSLWILGPDKCG
Trigger: CCCACACTTGTCAGGGCCCAAAATCCAGAGCGAGCTGAGGTGGCAGGAGGCTGGCATGGCAGTTCCACCCTGGGCACGTACACACCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CCA 90 bp TTGGAGCAAAGTTGTGGCCAAGCCCAGGTGCTGTTGCAACCCTGCTaGGTGTGTACGTGCCCAGGGTGGAACTGCCATGCCAGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: LEQSCGQAQVLLQPC*VCTCPGWNCHASLL
Trigger: CAGGAGGCTGGCATGGCAGTTCCACCCTGGGCACGTACACACCCAGCAGGGTTGCAACAGCACCTGGGCTTGGCCACAACTTTGCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 90 bp ATTTTGGAGCAAAGTTGTGGCCAAGCCCAGGTGCTGTTGCAACCCTaGTGGGTGTGTACGTGCCCAGGGTGGAACTGCCATGCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: ILEQSCGQAQVLLQP*WVCTCPGWNCHASL
Trigger: GAGGCTGGCATGGCAGTTCCACCCTGGGCACGTACACACCCAGCAGGGTTGCAACAGCACCTGGGCTTGGCCACAACTTTGCTCCAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS TCA 90 bp GGCCTGAAGCCTGGGTGCCAGGCTGCCGGTTCTAGGTGGAGTCTGTaGCCCAGAGTGAGAACTTATGATGCTTTTTCCAGGCCTGCCCAT +
Preference number: 5 (lower is better)
Translates to: GLKPGCQAAGSRWSL*PRVRTYDAFSRPAH
Trigger: ATGGGCAGGCCTGGAAAAAGCATCATAAGTTCTCACTCTGGGTCACAGACTCCACCTAGAACCGGCAGCCTGGCACCCAGGCTTCAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 90 bp GCTCAGCATGGACTTGCAGGTGCACCTCAGCACAAACCACCTGGGTaGCATAGATGGCATGTTGATGGCAGCAGGCAGACAGGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: AQHGLAGAPQHKPPG*HRWHVDGSRQTGSW
Trigger: CCAGGAACCTGTCTGCCTGCTGCCATCAACATGCCATCTATGGCACCCAGGTGGTTTGTGCTGAGGTGCACCTGCAAGTCCATGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 90 bp CGGGGAGGACAAATATGTGGCAAGAGGGACAGGGAAGCCAGTTCCTaGAGCTGCTTGCAAGACAAGCAGGGATGTGTCCTTCCAGCCATA +
Preference number: 5 (lower is better)
Translates to: RGGQICGKRDREASS*SCLQDKQGCVLPAI
Trigger: TATGGCTGGAAGGACACATCCCTGCTTGTCTTGCAAGCAGCTGCAGGAACTGGCTTCCCTGTCCCTCTTGCCACATATTTGTCCTCCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CCA 90 bp GGGTGCCATAGATGGCATGTTGATGGCAGCAGGCAGACAGGTTCCTaGATAGAAAGGGGTGGTTCTCTGGTGAAACCCCACCTTCAAGCC +
Preference number: 5 (lower is better)
Translates to: GCHRWHVDGSRQTGS*IERGGSLVKPHLQA
Trigger: GGCTTGAAGGTGGGGTTTCACCAGAGAACCACCCCTTTCTATCCAGGAACCTGTCTGCCTGCTGCCATCAACATGCCATCTATGGCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CCA 90 bp GGACTTGCAGGTGCACCTCAGCACAAACCACCTGGGTGCCATAGATaGCATGTTGATGGCAGCAGGCAGACAGGTTCCTGGATAGAAAGG +
Preference number: 5 (lower is better)
Translates to: GLAGAPQHKPPGCHR*HVDGSRQTGSWIER
Trigger: CCTTTCTATCCAGGAACCTGTCTGCCTGCTGCCATCAACATGCCATCTATGGCACCCAGGTGGTTTGTGCTGAGGTGCACCTGCAAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 90 bp GGACAAATATGTGGCAAGAGGGACAGGGAAGCCAGTTCCTGCAGCTaGTTGCAAGACAAGCAGGGATGTGTCCTTCCAGCCATAGAGCAG +
Preference number: 5 (lower is better)
Translates to: GQICGKRDREASSCS*LQDKQGCVLPAIEQ
Trigger: CTGCTCTATGGCTGGAAGGACACATCCCTGCTTGTCTTGCAAGCAGCTGCAGGAACTGGCTTCCCTGTCCCTCTTGCCACATATTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CCA 90 bp TCACTCTCAACCTCCTCCACCCCTCCCTTGGGTATAGAACAGATGTaGCTCCTCTGTGTACCGTGTGATGGCAACCTCAGCATCCCCTTT +
Preference number: 5 (lower is better)
Translates to: SLSTSSTPPLGIEQM*LLCVPCDGNLSIPF
Trigger: AAAGGGGATGCTGAGGTTGCCATCACACGGTACACAGAGGAGCCACATCTGTTCTATACCCAAGGGAGGGGTGGAGGAGGTTGAGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 90 bp AATCCTGGACTCAGCCAGATTCACACAGACTTAGGGACTACCAGCTaGAGAAAGGAGCTACCCACTTTGGGTCTCCTCTCCATTAGGGGC +
Preference number: 5 (lower is better)
Translates to: NPGLSQIHTDLGTTS*RKELPTLGLLSIRG
Trigger: GCCCCTAATGGAGAGGAGACCCAAAGTGGGTAGCTCCTTTCTGCAGCTGGTAGTCCCTAAGTCTGTGTGAATCTGGCTGAGTCCAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS-3UTR CAA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTTGCAATTGCGCAGATTaGCTGTCGCCAGAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGCNCAD*LSPESH
Trigger: GTGGCTCTCTGGCGACAGCAAATCTGCGCAATTGCA...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTAGCGAACCCTTGCAATaGCGCAGATTTGCTGTCGCC +
Preference number: 5 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGSEPLQ*RRFAVA
Trigger: GGCGACAGCAAATCTGCGCAATTGCAAGGGTTCGCT...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS GCA 90 bp CCCTTCGCTGAATTGGAGCATCCTTTACTGAATCTCAGGGGCAGTTaGATGCTCCAATTTTGGAGCAAAGTTGTGGCCAAGCCCAGGTGC +
Preference number: 5 (lower is better)
Translates to: PFAELEHPLLNLRGS*MLQFWSKVVAKPRC
Trigger: GCACCTGGGCTTGGCCACAACTTTGCTCCAAAATTGGAGCATGCAACTGCCCCTGAGATTCAGTAAAGGATGCTCCAATTCAGCGAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS-3UTR CAA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTCCTTGTGCTCCTTCTTaGCTGGCATTCCATGTCCTA +
Preference number: 5 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGPCAPS*LAFHVL
Trigger: TAGGACATGGAATGCCAGCAAAGAAGGAGCACAAGG...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTAGGGTCATGTGGTTGTaGTCCAGGAGCAAGGAAATA +
Preference number: 5 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGRVMWL*SRSKEI
Trigger: TATTTCCTTGCTCCTGGACAACAACCACATGACCCT...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTATGCCAGGAATCCGATaGGATTGTCCTGTCCATTCT +
Preference number: 5 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGMPGIR*DCPVHS
Trigger: AGAATGGACAGGACAATCCAATCGGATTCCTGGCAT...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp AGCCCGCGCACTTTAGCTTCCCTTGGGAGAGAAATACTTTCCTGTCCGCCAGGATTTCTCTTCCTCATCTaGTTTCTGGGAAAATGGAAG +
Preference number: 5 (lower is better)
Translates to: SPRTLASLGREILSCPPGFLFLI*FLGKWK
Trigger: CTTCCATTTTCCCAGAAACAAGATGAGGAAGAGAAA...TCCTGGCGGACAGGAAAGTATTTCTCTCCCAAGGGAAGCTAAAGTGCGCGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAGAGAGGGTCATGTGGTaGTTGTCCAGGAGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIERVMW*LSRSKE
Trigger: TTCCTTGCTCCTGGACAACAACCACATGACCCTCTC...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS GCA 90 bp TACAAGCAGAGTCTGATGAAGAGCTTCCACCTAGTGATTTGTCTTTaGTTGCTGCTGGGATCATGGGGATCATTGGGTGAAGAATCCCAG +
Preference number: 5 (lower is better)
Translates to: YKQSLMKSFHLVICL*LLLGSWGSLGEESQ
Trigger: CTGGGATTCTTCACCCAATGATCCCCATGATCCCAGCAGCAAGCAAAGACAAATCACTAGGTGGAAGCTCTTCATCAGACTCTGCTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587206.1
CDS-3UTR CAA 90 bp AGCCCGCGCACTTTAGCTTCCCTTGGGAGAGAAATACTTTCCTGTCCGCCAGGATATCCACTGAGCTCCTaGTTTAGAAGAAAGTTATTC +
Preference number: 5 (lower is better)
Translates to: SPRTLASLGREILSCPPGYPLSS*FRRKLF
Trigger: GAATAACTTTCTTCTAAACAAGGAGCTCAGTGGATA...TCCTGGCGGACAGGAAAGTATTTCTCTCCCAAGGGAAGCTAAAGTGCGCGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp CAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTGTGAGAGGAGGTTTTATTCATTATCTGTaGGGTCGTGTTGGTGACAGG +
Preference number: 5 (lower is better)
Translates to: QNNGTSMACRDTEAVRGGFIHYL*GRVGDR
Trigger: CCTGTCACCAACACGACCCAACAGATAATGAATAAA...ACCTCCTCTCACAGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATACCTTGTGCTCCTTCTTaGCTGGCATTCCATGTCCTA +
Preference number: 5 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIPCAPS*LAFHVL
Trigger: TAGGACATGGAATGCCAGCAAAGAAGGAGCACAAGG...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp GGACTTGTTCCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTAATGGTGACTGAACCTTaGGTGGGAACAGACAACCCA +
Preference number: 5 (lower is better)
Translates to: GLVPSQQAFQCRQLFPLVMVTEP*VGTDNP
Trigger: TGGGTTGTCTGTTCCCACCAAAGGTTCAGTCACCAT...TACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTTGCAATTGCGCAGATTaGCTGTCGCCAGAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: FSIIQNNGTSMACRDTEACNCAD*LSPESH
Trigger: GTGGCTCTCTGGCGACAGCAAATCTGCGCAATTGCA...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TCCAGGAGCAAGGAAATACAAATGAGGAGAAAGTTCCCAGGTGTAACTGTTTTGTGCAATTGCGCAGATTaGCTGTCGCCAGAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: SRSKEIQMRRKFPGVTVLCNCAD*LSPESH
Trigger: GTGGCTCTCTGGCGACAGCAAATCTGCGCAATTGCA...CAAAACAGTTACACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGCTCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS TCA 90 bp AGTGATTTGTCTTTGCTTGCTGCTGGGATCATGGGGATCATTGGGTaGAGAATCCCAGCAGGCCTTCTGAAAGATATATTTCCATGTGGG +
Preference number: 5 (lower is better)
Translates to: SDLSLLAAGIMGIIG*RIPAGLLKDIFPCG
Trigger: CCCACATGGAAATATATCTTTCAGAAGGCCTGCTGGGATTCTTCACCCAATGATCCCCATGATCCCAGCAGCAAGCAAAGACAAATCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587206.1
CDS-3UTR CAA 90 bp GGACTTGTTCCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTAATCTGTTGGGTCGTGTaGGTGACAGGTGTGTATACA +
Preference number: 5 (lower is better)
Translates to: GLVPSQQAFQCRQLFPLVICWVV*VTGVYT
Trigger: TGTATACACACCTGTCACCAACACGACCCAACAGAT...TACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp TTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAAATAGCAATGTCCGACCTTGTGCTCCTTCTTaGCTGGCATTCCATGTCCTA +
Preference number: 5 (lower is better)
Translates to: FSVVSFFRLYFSQNSNVRPCAPS*LAFHVL
Trigger: TAGGACATGGAATGCCAGCAAAGAAGGAGCACAAGG...TCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTCCCGAAGACCCATCATaGTCATCAAGGCCTTCATCC +
Preference number: 5 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAPEDPS*SSRPSS
Trigger: GGATGAAGGCCTTGATGACAATGATGGGTCTTCGGG...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATACAAACTCCGGTCAGCTaGCTGAGATTTTCTAGGTCA +
Preference number: 5 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIQTPVS*LRFSRS
Trigger: TGACCTAGAAAATCTCAGCAAGCTGACCGGAGTTTG...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAATCACGCGGTCTGTTTaGCGTTCTTTCAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIITRSV*RSFRRF
Trigger: GAACCTTCTGAAAGAACGCAAAACAGACCGCGTGAT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp GGACTTGTTCCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTAATCACGCGGTCTGTTTaGCGTTCTTTCAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: GLVPSQQAFQCRQLFPLVITRSV*RSFRRF
Trigger: GAACCTTCTGAAAGAACGCAAAACAGACCGCGTGAT...TACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAAGGGTCATGTGGTTGTaGTCCAGGAGCAAGGAAATA +
Preference number: 5 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIRVMWL*SRSKEI
Trigger: TATTTCCTTGCTCCTGGACAACAACCACATGACCCT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TCCAGGAGCAAGGAAATACAAATGAGGAGAAAGTTCCCAGGTGTAACTGTTTTGGAGAGGGTCATGTGGTaGTTGTCCAGGAGCAAGGAA +
Preference number: 5 (lower is better)
Translates to: SRSKEIQMRRKFPGVTVLERVMW*LSRSKE
Trigger: TTCCTTGCTCCTGGACAACAACCACATGACCCTCTC...CAAAACAGTTACACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGCTCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAATGCCAGGAATCCGATaGGATTGTCCTGTCCATTCT +
Preference number: 5 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIMPGIR*DCPVHS
Trigger: AGAATGGACAGGACAATCCAATCGGATTCCTGGCAT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS TCA 90 bp TGGCAATGTAAGGTGGGCAACTCGATGTTAAAACCAGCCAGAACATaGTATATGCCAGGAATCCGATTGGATTGTCCTGTCCATTCTCCA +
Preference number: 5 (lower is better)
Translates to: WQCKVGNSMLKPART*YMPGIRLDCPVHSP
Trigger: TGGAGAATGGACAGGACAATCCAATCGGATTCCTGGCATATATCATGTTCTGGCTGGTTTTAACATCGAGTTGCCCACCTTACATTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000541225.5
ENST00000586539.6
CDS-3UTR CAA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTATGGTGACTGAACCTTaGGTGGGAACAGACAACCCA +
Preference number: 5 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAMVTEP*VGTDNP
Trigger: TGGGTTGTCTGTTCCCACCAAAGGTTCAGTCACCAT...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATAGCGAACCCTTGCAATaGCGCAGATTTGCTGTCGCC +
Preference number: 5 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINSEPLQ*RRFAVA
Trigger: GGCGACAGCAAATCTGCGCAATTGCAAGGGTTCGCT...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp TTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAAATAGCAATGTCCGAAGGGTCATGTGGTTGTaGTCCAGGAGCAAGGAAATA +
Preference number: 5 (lower is better)
Translates to: FSVVSFFRLYFSQNSNVRRVMWL*SRSKEI
Trigger: TATTTCCTTGCTCCTGGACAACAACCACATGACCCT...TCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAAGGAATCCGATTGGATaGTCCTGTCCATTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIRNPIG*SCPFSK
Trigger: TTTGGAGAATGGACAGGACAATCCAATCGGATTCCT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS CCA 90 bp AAGCCACCAGCAGAGAGGTACCTTCATGAACATCTGCTCTCACTGTaGCTACAGAGGGATTGTGAATATCGGTTTTCTCTTCTTTCATTA +
Preference number: 5 (lower is better)
Translates to: KPPAERYLHEHLLSL*LQRDCEYRFSLLSL
Trigger: TAATGAAAGAAGAGAAAACCGATATTCACAATCCCTCTGTAGCCACAGTGAGAGCAGATGTTCATGAAGGTACCTCTCTGCTGGTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS-3UTR CAA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTATCTGTTGGGTCGTGTaGGTGACAGGTGTGTATACA +
Preference number: 5 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAICWVV*VTGVYT
Trigger: TGTATACACACCTGTCACCAACACGACCCAACAGAT...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATATTTATTCATTATCTGTaGGGTCGTGTTGGTGACAGG +
Preference number: 5 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIFIHYL*GRVGDR
Trigger: CCTGTCACCAACACGACCCAACAGATAATGAATAAA...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp GGACTTGTTCCATCTCAACAAGCCTTTCAGTGTCGTCAGCTTTTTCCGCTTGTATTTATTCATTATCTGTaGGGTCGTGTTGGTGACAGG +
Preference number: 5 (lower is better)
Translates to: GLVPSQQAFQCRQLFPLVFIHYL*GRVGDR
Trigger: CCTGTCACCAACACGACCCAACAGATAATGAATAAA...TACAAGCGGAAAAAGCTGACGACACTGAAAGGCTTGTTGAGATGGAACAAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATCCCGAAGACCCATCATaGTCATCAAGGCCTTCATCC +
Preference number: 5 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINPEDPS*SSRPSS
Trigger: GGATGAAGGCCTTGATGACAATGATGGGTCTTCGGG...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTATCACGCGGTCTGTTTaGCGTTCTTTCAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAITRSV*RSFRRF
Trigger: GAACCTTCTGAAAGAACGCAAAACAGACCGCGTGAT...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATGCAATTGCGCAGATTaGCTGTCGCCAGAGAGCCAC +
Preference number: 5 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRCNCAD*LSPESH
Trigger: GTGGCTCTCTGGCGACAGCAAATCTGCGCAATTGCA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTATGCCAGGAATCCGATaGGATTGTCCTGTCCATTCT +
Preference number: 5 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAMPGIR*DCPVHS
Trigger: AGAATGGACAGGACAATCCAATCGGATTCCTGGCAT...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS TCA 90 bp ATACAGGAAAATAAGTGTGTCCACAGCCAACAATCCAATCTCAGCTaGAAAATCCAATATCCCATAAATGTGGTGCCTGTCCATCCTGGC +
Preference number: 5 (lower is better)
Translates to: IQENKCVHSQQSNLS*KIQYPINVVPVHPG
Trigger: GCCAGGATGGACAGGCACCACATTTATGGGATATTGGATTTTTCAGCTGAGATTGGATTGTTGGCTGTGGACACACTTATTTTCCTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CCA 90 bp TTACCTGCCAGGAAGGGAGTAGAGGCTACTTTATTCATTATCTGTTaGGTCGTGTTGGTGACAGGTGTGTATACAACAGAAAATCTGGAT +
Preference number: 5 (lower is better)
Translates to: LPARKGVEATLFIIC*VVLVTGVYTTENLD
Trigger: ATCCAGATTTTCTGTTGTATACACACCTGTCACCAACACGACCCAACAGATAATGAATAAAGTAGCCTCTACTCCCTTCCTGGCAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269080.6
ENST00000428549.8
ENST00000430352.6
ENST00000541225.5
ENST00000585531.1
ENST00000585850.1
ENST00000586539.6
ENST00000615593.4
CDS-3UTR CAA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATATTTCTCTTCCTCATCTaGTTTCTGGGAAAATGGAAG +
Preference number: 5 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIFLFLI*FLGKWK
Trigger: CTTCCATTTTCCCAGAAACAAGATGAGGAAGAGAAA...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269080.6
ENST00000430352.6
CDS-3UTR CAA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGACCCGAAGACCCATCATaGTCATCAAGGCCTTCATCC +
Preference number: 5 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRPEDPS*SSRPSS
Trigger: GGATGAAGGCCTTGATGACAATGATGGGTCTTCGGG...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCAGCGAACCCTTGCAATaGCGCAGATTTGCTGTCGCC +
Preference number: 5 (lower is better)
Translates to: LCLHHGVTCGYVINDIDISEPLQ*RRFAVA
Trigger: GGCGACAGCAAATCTGCGCAATTGCAAGGGTTCGCT...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATATTCAATCTTTTGGCATaGCATGCTAACGAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIFNLLA*HANEKL
Trigger: CAGCTTTTCGTTAGCATGCAATGCCAAAAGATTGAA...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATATATCCACTGAGCTCCTaGTTTAGAAGAAAGTTATTC +
Preference number: 5 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIYPLSS*FRRKLF
Trigger: GAATAACTTTCTTCTAAACAAGGAGCTCAGTGGATA...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATAAAGCAATTCAATCTTTaGGCATTGCATGCTAACGAA +
Preference number: 5 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIKQFNL*ALHANE
Trigger: TTCGTTAGCATGCAATGCCAAAAGATTGAATTGCTT...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TCCAGGAGCAAGGAAATACAAATGAGGAGAAAGTTCCCAGGTGTAACTGTTTTGTTCCAGCAGAACCCTTaGTATCTCTTTATCCACTTC +
Preference number: 5 (lower is better)
Translates to: SRSKEIQMRRKFPGVTVLFQQNP*YLFIHF
Trigger: GAAGTGGATAAAGAGATACAAAGGGTTCTGCTGGAA...CAAAACAGTTACACCTGGGAACTTTCTCCTCATTTGTATTTCCTTGCTCCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp ACCCGAACCTCCTCCTCCCACCACACGGAGAACCATTTCTGTACTTATAATATATGGTTCTTCTGGATTTaGACACACATCACTACTAAA +
Preference number: 5 (lower is better)
Translates to: TRTSSSHHTENHFCTYNIWFFWI*THITTK
Trigger: TTTAGTAGTGATGTGTGTCAAAATCCAGAAGAACCA...TATATTATAAGTACAGAAATGGTTCTCCGTGTGGTGGGAGGAGGAGGTTCGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430352.6
CDS-3UTR CAA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCATGGTGACTGAACCTTaGGTGGGAACAGACAACCCA +
Preference number: 5 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIMVTEP*VGTDNP
Trigger: TGGGTTGTCTGTTCCCACCAAAGGTTCAGTCACCAT...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAAATGGTGACTGAACCTTaGGTGGGAACAGACAACCCA +
Preference number: 5 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEMVTEP*VGTDNP
Trigger: TGGGTTGTCTGTTCCCACCAAAGGTTCAGTCACCAT...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAATCACGCGGTCTGTTTaGCGTTCTTTCAGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRITRSV*RSFRRF
Trigger: GAACCTTCTGAAAGAACGCAAAACAGACCGCGTGAT...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATTTAACAAGCGAACCCTaGCAATTGCGCAGATTTGCT +
Preference number: 5 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINLTSEP*QLRRFA
Trigger: AGCAAATCTGCGCAATTGCAAGGGTTCGCTTGTTAA...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp TTCAGTGTCGTCAGCTTTTTCCGCTTGTACTTCTCCCAAAATAGCAATGTCCGACCAGGTGTAACTGTTTaGATATATTTTCACCATGGT +
Preference number: 5 (lower is better)
Translates to: FSVVSFFRLYFSQNSNVRPGVTV*IYFHHG
Trigger: ACCATGGTGAAAATATATCAAAACAGTTACACCTGG...TCGGACATTGCTATTTTGGGAGAAGTACAAGCGGAAAAAGCTGACGACACTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAAATCTGTTGGGTCGTGTaGGTGACAGGTGTGTATACA +
Preference number: 5 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEICWVV*VTGVYT
Trigger: TGTATACACACCTGTCACCAACACGACCCAACAGAT...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCCAAACTCCGGTCAGCTaGCTGAGATTTTCTAGGTCA +
Preference number: 5 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIQTPVS*LRFSRS
Trigger: TGACCTAGAAAATCTCAGCAAGCTGACCGGAGTTTG...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGATTAACAAGCGAACCCTaGCAATTGCGCAGATTTGCT +
Preference number: 5 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRLTSEP*QLRRFA
Trigger: AGCAAATCTGCGCAATTGCAAGGGTTCGCTTGTTAA...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGAGGCTAAGCAATTCAATCTTTaGGCATTGCATGCTAACGAA +
Preference number: 5 (lower is better)
Translates to: FSIIQNNGTSMACRDTEAKQFNL*ALHANE
Trigger: TTCGTTAGCATGCAATGCCAAAAGATTGAATTGCTT...AGCCTCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS GCA 90 bp ATTTCATTCCAATGTATTAATGAGCAGTTATCTCCTTTCCTCCCATaGTTAATGAGAAATAAAATACTGACTTTGGGCCCAGGTGGTGAC +
Preference number: 5 (lower is better)
Translates to: ISFQCINEQLSPFLP*LMRNKILTLGPGGD
Trigger: GTCACCACCTGGGCCCAAAGTCAGTATTTTATTTCTCATTAAGCATGGGAGGAAAGGAGATAACTGCTCATTAATACATTGGAATGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS-3UTR CAA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAATTAACAAGCGAACCCTaGCAATTGCGCAGATTTGCT +
Preference number: 5 (lower is better)
Translates to: LFHIFYLLSHVSCCYICELTSEP*QLRRFA
Trigger: AGCAAATCTGCGCAATTGCAAGGGTTCGCTTGTTAA...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCTTAACAAGCGAACCCTaGCAATTGCGCAGATTTGCT +
Preference number: 5 (lower is better)
Translates to: LCLHHGVTCGYVINDIDILTSEP*QLRRFA
Trigger: AGCAAATCTGCGCAATTGCAAGGGTTCGCTTGTTAA...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATTTCAATCTTTTGGCATaGCATGCTAACGAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINFNLLA*HANEKL
Trigger: CAGCTTTTCGTTAGCATGCAATGCCAAAAGATTGAA...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCAGGAATCCGATTGGATaGTCCTGTCCATTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIRNPIG*SCPFSK
Trigger: TTTGGAGAATGGACAGGACAATCCAATCGGATTCCT...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS TCA 90 bp TGTACATCCATTCGTTCTTCAGAAAAGAGAGAAGAAAAGAGAAGATaGGAAGATAAGAACAAACAGCCAATCATTGTGGCAGGTGGTATT +
Preference number: 5 (lower is better)
Translates to: CTSIRSSEKREEKRR*EDKNKQPIIVAGGI
Trigger: AATACCACCTGCCACAATGATTGGCTGTTTGTTCTTATCTTCTCATCTTCTCTTTTCTTCTCTCTTTTCTGAAGAACGAATGGATGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS GCA 90 bp CACCCTAAGGATTCTGTGACAACCTTTCAGTGCTTAGCTTTTGTGTaGATTTATGTGATAATTCGTGAATTTATTCTCTTGGGTAGTTCA +
Preference number: 5 (lower is better)
Translates to: HPKDSVTTFQCLAFV*IYVIIREFILLGSS
Trigger: TGAACTACCCAAGAGAATAAATTCACGAATTATCACATAAATGCACACAAAAGCTAAGCACTGAAAGGTTGTCACAGAATCCTTAGGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589980.1
CDS-3UTR CAA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCTTTATTCATTATCTGTaGGGTCGTGTTGGTGACAGG +
Preference number: 5 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIFIHYL*GRVGDR
Trigger: CCTGTCACCAACACGACCCAACAGATAATGAATAAA...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTCACCATGGTATACTCCACAAGAAGAGGGCAAAATCCAGCCATTAGAATTAATAAGCAATTCAATCTTTaGGCATTGCATGCTAACGAA +
Preference number: 5 (lower is better)
Translates to: FTMVYSTRRGQNPAIRINKQFNL*ALHANE
Trigger: TTCGTTAGCATGCAATGCCAAAAGATTGAATTGCTT...ATTAATTCTAATGGCTGGATTTTGCCCTCTTCTTGTGGAGTATACCATGGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615593.4
CDS-3UTR CAA 90 bp TTATTTCACATTTTCTACCTACTCAGTCATGTGAGCTGTTGCTACATTTGTGAATTCCAGCAGAACCCTTaGTATCTCTTTATCCACTTC +
Preference number: 5 (lower is better)
Translates to: LFHIFYLLSHVSCCYICEFQQNP*YLFIHF
Trigger: GAAGTGGATAAAGAGATACAAAGGGTTCTGCTGGAA...TTCACAAATGTAGCAACAGCTCACATGACTGAGTAGGTAGAAAATGTGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCTTTCTCTTCCTCATCTaGTTTCTGGGAAAATGGAAG +
Preference number: 5 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIFLFLI*FLGKWK
Trigger: CTTCCATTTTCCCAGAAACAAGATGAGGAAGAGAAA...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000269080.6
ENST00000430352.6
CDS-3UTR CAA 90 bp TTTATTCAGTATTATACAGAACAATGGAACCAGTATGGCCTGCAGAGATACAGACCAGGTGTAACTGTTTaGATATATTTTCACCATGGT +
Preference number: 5 (lower is better)
Translates to: FIQYYTEQWNQYGLQRYRPGVTV*IYFHHG
Trigger: ACCATGGTGAAAATATATCAAAACAGTTACACCTGG...TCTGTATCTCTGCAGGCCATACTGGTTCCATTGTTCTGTATAATACTGAATAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS-3UTR CAA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCTTCAATCTTTTGGCATaGCATGCTAACGAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIFNLLA*HANEKL
Trigger: CAGCTTTTCGTTAGCATGCAATGCCAAAAGATTGAA...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS TCA 90 bp GGATTCATTAAATGTATCTACCCGTCCCAGGTCCATGGTAAGCAGTaGAGAAAAATCATTTACTTGATGACTATGAGGATATATATACAA +
Preference number: 5 (lower is better)
Translates to: GFIKCIYPSQVHGKQ*RKIIYLMTMRIYIQ
Trigger: TTGTATATATATCCTCATAGTCATCAAGTAAATGATTTTTCTTCACTGCTTACCATGGACCTGGGACGGGTAGATACATTTAATGAATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000269080.6
ENST00000428549.8
ENST00000430352.6
ENST00000541225.5
ENST00000585531.1
ENST00000585850.1
ENST00000586539.6
ENST00000615593.4
CDS-3UTR CAA 90 bp TTATGCCTACATCATGGTGTTACCTGTGGATATGTTATCAACGATATTGATATCCCAGGTGTAACTGTTTaGATATATTTTCACCATGGT +
Preference number: 5 (lower is better)
Translates to: LCLHHGVTCGYVINDIDIPGVTV*IYFHHG
Trigger: ACCATGGTGAAAATATATCAAAACAGTTACACCTGG...GATATCAATATCGTTGATAACATATCCACAGGTAACACCATGATGTAGGCATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS GCA 72 bp CAACCCTGCTGGGTGTGTACGTGCCCAGGGTGGAACTaGCATGCCAGCCTCCTGCCACCTCAGCTCGCTCTG +
Preference number: 6 (lower is better)
Translates to: QPCWVCTCPGWN*HASLLPPQLAL
Trigger: CAGAGCGAGCTGAGGTGGCAGGAGGCTGGCATGGCAGTTCCACCCTGGGCACGTACACACCCAGCAGGGTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 72 bp GTACGTGCCCAGGGTGGAACTGCCATGCCAGCCTCCTaGCACCTCAGCTCGCTCTGGATTTTGGGCCCTGAC +
Preference number: 6 (lower is better)
Translates to: VRAQGGTAMPAS*HLSSLWILGPD
Trigger: GTCAGGGCCCAAAATCCAGAGCGAGCTGAGGTGGCAGGAGGCTGGCATGGCAGTTCCACCCTGGGCACGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS TCA 72 bp CTTGGGAGGCCGAGGCAGGAGAATGGCGTGAACCTGTaGGGCGGAGCTTGCAGTGAGCTGAGATCACGCCAC +
Preference number: 6 (lower is better)
Translates to: LGRPRQENGVNL*GGACSELRSRH
Trigger: GTGGCGTGATCTCAGCTCACTGCAAGCTCCGCCTCACAGGTTCACGCCATTCTCCTGCCTCGGCCTCCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428549.8
ENST00000585850.1
CDS GCA 72 bp CTGCTGGGTGTGTACGTGCCCAGGGTGGAACTGCCATaGCAGCCTCCTGCCACCTCAGCTCGCTCTGGATTT +
Preference number: 6 (lower is better)
Translates to: LLGVYVPRVELP*QPPATSARSGF
Trigger: AAATCCAGAGCGAGCTGAGGTGGCAGGAGGCTGGCATGGCAGTTCCACCCTGGGCACGTACACACCCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CCA 72 bp AGTTGTGGCCAAGCCCAGGTGCTGTTGCAACCCTGCTaGGTGTGTACGTGCCCAGGGTGGAACTGCCATGCC +
Preference number: 6 (lower is better)
Translates to: SCGQAQVLLQPC*VCTCPGWNCHA
Trigger: GGCATGGCAGTTCCACCCTGGGCACGTACACACCCAGCAGGGTTGCAACAGCACCTGGGCTTGGCCACAACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CCA 72 bp GTGGACAGAATGAGCCCAGCGGGTCTGAGCCAAACTTaGGCAAAGGCGCCACCAGCTCCAGAGGTTTTGACT +
Preference number: 6 (lower is better)
Translates to: VDRMSPAGLSQT*AKAPPAPEVLT
Trigger: AGTCAAAACCTCTGGAGCTGGTGGCGCCTTTGCCCAAGTTTGGCTCAGACCCGCTGGGCTCATTCTGTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589980.1
CDS CAA 90 bp CATGCTCCAATTTTGGAGCAAAGTTGTGGCCAAGCCCAGGTGCTGTaGCAACCCTGCTGGGTGTGTACGTGCCCAGGGTGGAACTGCCAT +
Preference number: 6 (lower is better)
Translates to: HAPILEQSCGQAQVL*QPCWVCTCPGWNCH
Trigger: ATGGCAGTTCCACCCTGGGCACGTACACACCCAGCAGGGTTGCAACAGCACCTGGGCTTGGCCACAACTTTGCTCCAAAATTGGAGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 72 bp GGACTTGCAGGTGCACCTCAGCACAAACCACCTGGGTaGCATAGATGGCATGTTGATGGCAGCAGGCAGACA +
Preference number: 6 (lower is better)
Translates to: GLAGAPQHKPPG*HRWHVDGSRQT
Trigger: TGTCTGCCTGCTGCCATCAACATGCCATCTATGGCACCCAGGTGGTTTGTGCTGAGGTGCACCTGCAAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CCA 72 bp GGGGCAGTTGCATGCTCCAATTTTGGAGCAAAGTTGTaGCCAAGCCCAGGTGCTGTTGCAACCCTGCTGGGT +
Preference number: 6 (lower is better)
Translates to: GAVACSNFGAKL*PSPGAVATLLG
Trigger: ACCCAGCAGGGTTGCAACAGCACCTGGGCTTGGCCACAACTTTGCTCCAAAATTGGAGCATGCAACTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 72 bp GTGGCTGCAGCCCGTCTGCAGCCATCACAGCAAAGATaGTGGCTGCAGCAAGGGAGACGTCTTAATACCTTT +
Preference number: 6 (lower is better)
Translates to: VAAARLQPSQQR*WLQQGRRLNTF
Trigger: AAAGGTATTAAGACGTCTCCCTTGCTGCAGCCAGCATCTTTGCTGTGATGGCTGCAGACGGGCTGCAGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CCA 72 bp TGGCAGCAGGCAGACAGGTTCCTGGATAGAAAGGGGTaGTTCTCTGGTGAAACCCCACCTTCAAGCCACCTT +
Preference number: 6 (lower is better)
Translates to: WQQADRFLDRKG*FSGETPPSSHL
Trigger: AAGGTGGCTTGAAGGTGGGGTTTCACCAGAGAACCACCCCTTTCTATCCAGGAACCTGTCTGCCTGCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CAA 72 bp TCAGGGGCAGTTGCATGCTCCAATTTTGGAGCAAAGTaGTGGCCAAGCCCAGGTGCTGTTGCAACCCTGCTG +
Preference number: 6 (lower is better)
Translates to: SGAVACSNFGAK*WPSPGAVATLL
Trigger: CAGCAGGGTTGCAACAGCACCTGGGCTTGGCCACAACTTTGCTCCAAAATTGGAGCATGCAACTGCCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CAA 90 bp ACTGGCAGGGGCCAGAAACAGGTAAGAGCCCTGCCCTTCGCTGAATaGGAGCATCCTTTACTGAATCTCAGGGGCAGTTGCATGCTCCAA +
Preference number: 6 (lower is better)
Translates to: TGRGQKQVRALPFAE*EHPLLNLRGSCMLQ
Trigger: TTGGAGCATGCAACTGCCCCTGAGATTCAGTAAAGGATGCTCCAATTCAGCGAAGGGCAGGGCTCTTACCTGTTTCTGGCCCCTGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS TCA 72 bp AGGCTGCCGGTTCTAGGTGGAGTCTGTGACCCAGAGTaGGAACTTATGATGCTTTTTCCAGGCCTGCCCATG +
Preference number: 6 (lower is better)
Translates to: RLPVLGGVCDPE*ELMMLFPGLPM
Trigger: CATGGGCAGGCCTGGAAAAAGCATCATAAGTTCTCACTCTGGGTCACAGACTCCACCTAGAACCGGCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CCA 72 bp AGATGGCATGTTGATGGCAGCAGGCAGACAGGTTCCTaGATAGAAAGGGGTGGTTCTCTGGTGAAACCCCAC +
Preference number: 6 (lower is better)
Translates to: RWHVDGSRQTGS*IERGGSLVKPH
Trigger: GTGGGGTTTCACCAGAGAACCACCCCTTTCTATCCAGGAACCTGTCTGCCTGCTGCCATCAACATGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CAA 72 bp GGCCAGAAACAGGTAAGAGCCCTGCCCTTCGCTGAATaGGAGCATCCTTTACTGAATCTCAGGGGCAGTTGC +
Preference number: 6 (lower is better)
Translates to: GQKQVRALPFAE*EHPLLNLRGSC
Trigger: GCAACTGCCCCTGAGATTCAGTAAAGGATGCTCCAATTCAGCGAAGGGCAGGGCTCTTACCTGTTTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CAA 90 bp GGAGCATCCTTTACTGAATCTCAGGGGCAGTTGCATGCTCCAATTTaGGAGCAAAGTTGTGGCCAAGCCCAGGTGCTGTTGCAACCCTGC +
Preference number: 6 (lower is better)
Translates to: GASFTESQGQLHAPI*EQSCGQAQVLLQPC
Trigger: GCAGGGTTGCAACAGCACCTGGGCTTGGCCACAACTTTGCTCCAAAATTGGAGCATGCAACTGCCCCTGAGATTCAGTAAAGGATGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 72 bp CAAATATGTGGCAAGAGGGACAGGGAAGCCAGTTCCTaGAGCTGCTTGCAAGACAAGCAGGGATGTGTCCTT +
Preference number: 6 (lower is better)
Translates to: QICGKRDREASS*SCLQDKQGCVL
Trigger: AAGGACACATCCCTGCTTGTCTTGCAAGCAGCTGCAGGAACTGGCTTCCCTGTCCCTCTTGCCACATATTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CCA 72 bp GCTGCAGCCCGTCTGCAGCCATCACAGCAAAGATGCTaGCTGCAGCAAGGGAGACGTCTTAATACCTTTAAT +
Preference number: 6 (lower is better)
Translates to: AAARLQPSQQRC*LQQGRRLNTFN
Trigger: ATTAAAGGTATTAAGACGTCTCCCTTGCTGCAGCCAGCATCTTTGCTGTGATGGCTGCAGACGGGCTGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS TCA 72 bp AAACTTGGGCAAAGGCGCCACCAGCTCCAGAGGTTTTaGCTGGAAAAGCGACACCCTAAGGATTCTGTGACA +
Preference number: 6 (lower is better)
Translates to: KLGQRRHQLQRF*LEKRHPKDSVT
Trigger: TGTCACAGAATCCTTAGGGTGTCGCTTTTCCAGTCAAAACCTCTGGAGCTGGTGGCGCCTTTGCCCAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589980.1
CDS TCA 72 bp AAGGGAGACGTCTTAATACCTTTAATAGTTACTCCTTaGTGGCAGTGGCAGCCTGTCTGGAGCCACCACAGC +
Preference number: 6 (lower is better)
Translates to: KGDVLIPLIVTP*WQWQPVWSHHS
Trigger: GCTGTGGTGGCTCCAGACAGGCTGCCACTGCCATCAAGGAGTAACTATTAAAGGTATTAAGACGTCTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS TCA 72 bp GGACATTCTCTCTTAATGCCTTTAATAATTACCCCTTaGTGGTGGCTGCAGCCCGTCTGCAGCCATCACAGC +
Preference number: 6 (lower is better)
Translates to: GHSLLMPLIITP*WWLQPVCSHHS
Trigger: GCTGTGATGGCTGCAGACGGGCTGCAGCCACCATCAAGGGGTAATTATTAAAGGCATTAAGAGAGAATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 72 bp CAGCCCGTCTGCAGCCATCACAGCAAAGATGCTGGCTaGAGCAAGGGAGACGTCTTAATACCTTTAATAGTT +
Preference number: 6 (lower is better)
Translates to: QPVCSHHSKDAG*SKGDVLIPLIV
Trigger: AACTATTAAAGGTATTAAGACGTCTCCCTTGCTGCAGCCAGCATCTTTGCTGTGATGGCTGCAGACGGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 72 bp CCAAGCCACCAGCAGAGAGGTACCTTCATGAACATCTaGTCTCACTGTGGCTACAGAGGGATTGTGAATATC +
Preference number: 6 (lower is better)
Translates to: PSHQQRGTFMNI*SHCGYRGIVNI
Trigger: GATATTCACAATCCCTCTGTAGCCACAGTGAGAGCAGATGTTCATGAAGGTACCTCTCTGCTGGTGGCTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CAA 72 bp CAAGGGAGACGTCTTAATACCTTTAATAGTTACTCCTaGATGGCAGTGGCAGCCTGTCTGGAGCCACCACAG +
Preference number: 6 (lower is better)
Translates to: QGRRLNTFNSYS*MAVAACLEPPQ
Trigger: CTGTGGTGGCTCCAGACAGGCTGCCACTGCCATCAAGGAGTAACTATTAAAGGTATTAAGACGTCTCCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CAA 90 bp AAGCAGAGTCTGATGAAGAGCTTCCACCTAGTGATTTGTCTTTGCTaGCTGCTGGGATCATGGGGATCATTGGGTGAAGAATCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: KQSLMKSFHLVICLC*LLGSWGSLGEESQQ
Trigger: CTGCTGGGATTCTTCACCCAATGATCCCCATGATCCCAGCAGCAAGCAAAGACAAATCACTAGGTGGAAGCTCTTCATCAGACTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587206.1
CDS TCA 72 bp CACTCATGGACCAAATGGCACACACTTCCTCCTTTCTaGGCCCATAAAAATCCTGGACTCAGCCAGATTCAC +
Preference number: 6 (lower is better)
Translates to: HSWTKWHTLPPF*AHKNPGLSQIH
Trigger: GTGAATCTGGCTGAGTCCAGGATTTTTATGGGCTCAGAAAGGAGGAAGTGTGTGCCATTTGGTCCATGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 72 bp GCTGGGACCGAGCTCTGTTCTTATAATCATCGATGCTaGTCATGGCAATGTAAGGTGGGCAACTCGATGTTA +
Preference number: 6 (lower is better)
Translates to: AGTELCSYNHRC*SWQCKVGNSML
Trigger: TAACATCGAGTTGCCCACCTTACATTGCCATGAGCAGCATCGATGATTATAAGAACAGAGCTCGGTCCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000541225.5
ENST00000586539.6
CDS GCA 72 bp GGATCAACATCTTTTGAGTACCTCCTATGTAACAAGTaGTGTGTTGCCTGTGGGTACAGCGGAGGGTGGAAT +
Preference number: 6 (lower is better)
Translates to: GSTSFEYLLCNK*CVACGYSGGWN
Trigger: ATTCCACCCTCCGCTGTACCCACAGGCAACACAGCACTTGTTACATAGGAGGTACTCAAAAGATGTTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CAA 72 bp AGTGAGGCCATGTTAAATCATCCAGCCCCTGTCACTTaGGTCCAGAATAGAAAAACTGCCCAGTCAACCCAC +
Preference number: 6 (lower is better)
Translates to: SEAMLNHPAPVT*VQNRKTAQSTH
Trigger: GTGGGTTGACTGGGCAGTTTTTCTATTCTGGACCAAAGTGACAGGGGCTGGATGATTTAACATGGCCTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587206.1
CDS CAA 72 bp TGGACATTCTCTCTTAATGCCTTTAATAATTACCCCTaGATGGTGGCTGCAGCCCGTCTGCAGCCATCACAG +
Preference number: 6 (lower is better)
Translates to: WTFSLNAFNNYP*MVAAARLQPSQ
Trigger: CTGTGATGGCTGCAGACGGGCTGCAGCCACCATCAAGGGGTAATTATTAAAGGCATTAAGAGAGAATGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS GCA 72 bp AGTCTGATGAAGAGCTTCCACCTAGTGATTTGTCTTTaGTTGCTGCTGGGATCATGGGGATCATTGGGTGAA +
Preference number: 6 (lower is better)
Translates to: SLMKSFHLVICL*LLLGSWGSLGE
Trigger: TTCACCCAATGATCCCCATGATCCCAGCAGCAAGCAAAGACAAATCACTAGGTGGAAGCTCTTCATCAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587206.1
CDS GCA 72 bp CTGCAGCTTTTCCCATCAAGGTGTAGTCCCTTTGTCTaGCCCTCACATTTAGCTTTGCCTATATACCCTGTA +
Preference number: 6 (lower is better)
Translates to: LQLFPSRCSPFV*PSHLALPIYPV
Trigger: TACAGGGTATATAGGCAAAGCTAAATGTGAGGGGCAGACAAAGGGACTACACCTTGATGGGAAAAGCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587206.1
CDS GCA 72 bp GAATTGGAGCATCCTTTACTGAATCTCAGGGGCAGTTaGATGCTCCAATTTTGGAGCAAAGTTGTGGCCAAG +
Preference number: 6 (lower is better)
Translates to: ELEHPLLNLRGS*MLQFWSKVVAK
Trigger: CTTGGCCACAACTTTGCTCCAAAATTGGAGCATGCAACTGCCCCTGAGATTCAGTAAAGGATGCTCCAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CAA 72 bp CTGATGAAGAGCTTCCACCTAGTGATTTGTCTTTGCTaGCTGCTGGGATCATGGGGATCATTGGGTGAAGAA +
Preference number: 6 (lower is better)
Translates to: LMKSFHLVICLC*LLGSWGSLGEE
Trigger: TTCTTCACCCAATGATCCCCATGATCCCAGCAGCAAGCAAAGACAAATCACTAGGTGGAAGCTCTTCATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587206.1
CDS CAA 72 bp CAAGCAGAGTCTGATGAAGAGCTTCCACCTAGTGATTaGTCTTTGCTTGCTGCTGGGATCATGGGGATCATT +
Preference number: 6 (lower is better)
Translates to: QAESDEELPPSD*SLLAAGIMGII
Trigger: AATGATCCCCATGATCCCAGCAGCAAGCAAAGACAAATCACTAGGTGGAAGCTCTTCATCAGACTCTGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587206.1
CDS TCA 72 bp ATTTCCATGTGGGAAAAGACACGCAGCTGTCCTAACTaGAGCCCCAGATATGTGAGTGAGGCCATGTTAAAT +
Preference number: 6 (lower is better)
Translates to: ISMWEKTRSCPN*SPRYVSEAMLN
Trigger: ATTTAACATGGCCTCACTCACATATCTGGGGCTTCAGTTAGGACAGCTGCGTGTCTTTTCCCACATGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587206.1
CDS TCA 72 bp TCTTTGCTTGCTGCTGGGATCATGGGGATCATTGGGTaGAGAATCCCAGCAGGCCTTCTGAAAGATATATTT +
Preference number: 6 (lower is better)
Translates to: SLLAAGIMGIIG*RIPAGLLKDIF
Trigger: AAATATATCTTTCAGAAGGCCTGCTGGGATTCTTCACCCAATGATCCCCATGATCCCAGCAGCAAGCAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587206.1
CDS TCA 72 bp TCCAGTTCCCATTCCCAAGCAAAGATAATTTGCAGCTaGGATTTGCAACAAGGACCCAGCACGGATACAAAG +
Preference number: 6 (lower is better)
Translates to: SSSHSQAKIICS*DLQQGPSTDTK
Trigger: CTTTGTATCCGTGCTGGGTCCTTGTTGCAAATCTCAGCTGCAAATTATCTTTGCTTGGGAATGGGAACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585531.1
CDS GCA 72 bp CAATTTTTACAGAAGAAAAATGGTTCACAGGCTCCATaGAAGTCATCCGTGCTGTCCCTGACCGTGGTAATG +
Preference number: 6 (lower is better)
Translates to: QFLQKKNGSQAP*KSSVLSLTVVM
Trigger: CATTACCACGGTCAGGGACAGCACGGATGACTTGCATGGAGCCTGTGAACCATTTTTCTTCTGTAAAAATTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588458.1
CDS CCA 72 bp GCAGAGAGGTACCTTCATGAACATCTGCTCTCACTGTaGCTACAGAGGGATTGTGAATATCGGTTTTCTCTT +
Preference number: 6 (lower is better)
Translates to: AERYLHEHLLSL*LQRDCEYRFSL
Trigger: AAGAGAAAACCGATATTCACAATCCCTCTGTAGCCACAGTGAGAGCAGATGTTCATGAAGGTACCTCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CAA 72 bp CAGGAAGGGAGTAGAGGCTACTTTATTCATTATCTGTaGGGTCGTGTTGGTGACAGGTGTGTATACAACAGA +
Preference number: 6 (lower is better)
Translates to: QEGSRGYFIHYL*GRVGDRCVYNR
Trigger: TCTGTTGTATACACACCTGTCACCAACACGACCCAACAGATAATGAATAAAGTAGCCTCTACTCCCTTCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269080.6
ENST00000428549.8
ENST00000430352.6
ENST00000541225.5
ENST00000585531.1
ENST00000585850.1
ENST00000586539.6
ENST00000615593.4
CDS CAA 90 bp TTTACCTGCCAGGAAGGGAGTAGAGGCTACTTTATTCATTATCTGTaGGGTCGTGTTGGTGACAGGTGTGTATACAACAGAAAATCTGGA +
Preference number: 6 (lower is better)
Translates to: FTCQEGSRGYFIHYL*GRVGDRCVYNRKSG
Trigger: TCCAGATTTTCTGTTGTATACACACCTGTCACCAACACGACCCAACAGATAATGAATAAAGTAGCCTCTACTCCCTTCCTGGCAGGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269080.6
ENST00000428549.8
ENST00000430352.6
ENST00000541225.5
ENST00000585531.1
ENST00000585850.1
ENST00000586539.6
ENST00000615593.4
CDS CCA 72 bp AGGAAGGGAGTAGAGGCTACTTTATTCATTATCTGTTaGGTCGTGTTGGTGACAGGTGTGTATACAACAGAA +
Preference number: 6 (lower is better)
Translates to: RKGVEATLFIIC*VVLVTGVYTTE
Trigger: TTCTGTTGTATACACACCTGTCACCAACACGACCCAACAGATAATGAATAAAGTAGCCTCTACTCCCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269080.6
ENST00000428549.8
ENST00000430352.6
ENST00000541225.5
ENST00000585531.1
ENST00000585850.1
ENST00000586539.6
ENST00000615593.4
CDS TCA 72 bp AATAAGTGTGTCCACAGCCAACAATCCAATCTCAGCTaGAAAATCCAATATCCCATAAATGTGGTGCCTGTC +
Preference number: 6 (lower is better)
Translates to: NKCVHSQQSNLS*KIQYPINVVPV
Trigger: GACAGGCACCACATTTATGGGATATTGGATTTTTCAGCTGAGATTGGATTGTTGGCTGTGGACACACTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS CCA 72 bp AACCAGCCAGAACATGATATATGCCAGGAATCCGATTaGATTGTCCTGTCCATTCTCCAAAAATGTACTTCT +
Preference number: 6 (lower is better)
Translates to: NQPEHDICQESD*IVLSILQKCTS
Trigger: AGAAGTACATTTTTGGAGAATGGACAGGACAATCCAATCGGATTCCTGGCATATATCATGTTCTGGCTGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000541225.5
ENST00000586539.6
CDS CAA 72 bp AGCCAGAACATGATATATGCCAGGAATCCGATTGGATaGTCCTGTCCATTCTCCAAAAATGTACTTCTTTCA +
Preference number: 6 (lower is better)
Translates to: SQNMIYARNPIG*SCPFSKNVLLS
Trigger: TGAAAGAAGTACATTTTTGGAGAATGGACAGGACAATCCAATCGGATTCCTGGCATATATCATGTTCTGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000541225.5
ENST00000586539.6
CDS CAA 90 bp AGGAAGGGAGTAGAGGCTACTTTATTCATTATCTGTTGGGTCGTGTaGGTGACAGGTGTGTATACAACAGAAAATCTGGATTCATTAAAT +
Preference number: 6 (lower is better)
Translates to: RKGVEATLFIICWVV*VTGVYTTENLDSLN
Trigger: ATTTAATGAATCCAGATTTTCTGTTGTATACACACCTGTCACCAACACGACCCAACAGATAATGAATAAAGTAGCCTCTACTCCCTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269080.6
ENST00000428549.8
ENST00000430352.6
ENST00000541225.5
ENST00000585531.1
ENST00000585850.1
ENST00000586539.6
ENST00000615593.4
CDS TCA 72 bp AGGCTACTTTATTCATTATCTGTTGGGTCGTGTTGGTaGCAGGTGTGTATACAACAGAAAATCTGGATTCAT +
Preference number: 6 (lower is better)
Translates to: RLLYSLSVGSCW*QVCIQQKIWIH
Trigger: ATGAATCCAGATTTTCTGTTGTATACACACCTGTCACCAACACGACCCAACAGATAATGAATAAAGTAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269080.6
ENST00000428549.8
ENST00000430352.6
ENST00000541225.5
ENST00000585531.1
ENST00000585850.1
ENST00000586539.6
ENST00000615593.4
CDS TCA 72 bp TTAAGAAAGTTCTTGCATAATAAGGCCCAAGTTTGTTaGCACACACTGATCTTTCTCTTCCTCATCTTGTCA +
Preference number: 6 (lower is better)
Translates to: LRKFLHNKAQVC*HTLIFLFLILS
Trigger: TGACAAGATGAGGAAGAGAAAGATCAGTGTGTGTCAACAAACTTGGGCCTTATTATGCAAGAACTTTCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000428549.8
ENST00000586539.6
CDS TCA 72 bp TTAAGAAAGTTCTTGCATAATAAGGCCCAAGTTTGTTaGCACACACTGATCTTTCTCTTCCTCATCTTGTCT +
Preference number: 6 (lower is better)
Translates to: LRKFLHNKAQVC*HTLIFLFLILS
Trigger: AGACAAGATGAGGAAGAGAAAGATCAGTGTGTGTCAACAAACTTGGGCCTTATTATGCAAGAACTTTCTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585531.1
CDS CAA 72 bp AATTACTATTTAACTTCGCTCATGGATCAACATCTTTaGAGTACCTCCTATGTAACAAGTGCTGTGTTGCCT +
Preference number: 6 (lower is better)
Translates to: NYYLTSLMDQHL*STSYVTSAVLP
Trigger: AGGCAACACAGCACTTGTTACATAGGAGGTACTCAAAAGATGTTGATCCATGAGCGAAGTTAAATAGTAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591459.1
CDS TCA 72 bp TTAAGAAAGTTCTTGCATAATAAGGCCCAAGTTTGTTaGCACACACTGATCTTTCTCTTCCTCATCTTGTTT +
Preference number: 6 (lower is better)
Translates to: LRKFLHNKAQVC*HTLIFLFLILF
Trigger: AAACAAGATGAGGAAGAGAAAGATCAGTGTGTGTCAACAAACTTGGGCCTTATTATGCAAGAACTTTCTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000585850.1
ENST00000615593.4
CDS TCA 72 bp ATTCGTTCTTCAGAAAAGAGAGAAGAAAAGAGAAGATaGGAAGATAAGAACAAACAGCCAATCATTGTGGCA +
Preference number: 6 (lower is better)
Translates to: IRSSEKREEKRR*EDKNKQPIIVA
Trigger: TGCCACAATGATTGGCTGTTTGTTCTTATCTTCTCATCTTCTCTTTTCTTCTCTCTTTTCTGAAGAACGAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269080.6
ENST00000430352.6
ENST00000586539.6
CDS TCA 72 bp ATGGAAGCAAGGAATCTAGAGGTATGGTTTATCCACTaGGCTCCTTGTTTAGAAGAAAGTTATTCATATTTT +
Preference number: 6 (lower is better)
Translates to: MEARNLEVWFIH*APCLEESYSYF
Trigger: AAAATATGAATAACTTTCTTCTAAACAAGGAGCTCAGTGGATAAACCATACCTCTAGATTCCTTGCTTCCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269080.6
ENST00000428549.8
ENST00000430352.6
ENST00000541225.5
ENST00000585850.1
ENST00000586539.6
ENST00000615593.4
CDS CAA 72 bp GAATATCGGTTTTCTCTTCTTTCATTAGTGGAGTATTaGTCAATAGCATTCCAAGCTGTCTTTTCCTTTCTT +
Preference number: 6 (lower is better)
Translates to: EYRFSLLSLVEY*SIAFQAVFSFL
Trigger: AAGAAAGGAAAAGACAGCTTGGAATGCTATTGACAAATACTCCACTAATGAAAGAAGAGAAAACCGATATTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591459.1