Pregenerated sensors for AARD (Homo sapiens)
Ensembl gene IDs: ENSG00000205002Ensembl transcript IDs: ENST00000378279.4, ENST00000523536.1
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTCATGTACATAAACAAGAGCAAGGCCTGGAGTCTTATACAGCTTaGCCCCAGGAACAAGGAAGCGAAGCACCCTCCCTCCCTCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: FHVHKQEQGLESYTA*PQEQGSEAPSLPPS Trigger: GGAGGGAGGGAGGGAGGGTGCTTCGCTTCCTTGTTCCTGGGGTCAAGCTGTATAAGACTCCAGGCCTTGCTCTTGTTTATGTACATGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR GCA 90 bp | TCTTTTAGTGCCCATTCAAAAATCCTAAGGACAAACCCATCTGCCTaGCTTGAGCTGCATGACTATATCCAGGAAGATGGAATACCCTTA | + |
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Preference number: 1 (lower is better) Translates to: SFSAHSKILRTNPSA*LELHDYIQEDGIPL Trigger: TAAGGGTATTCCATCTTCCTGGATATAGTCATGCAGCTCAAGGCAGGCAGATGGGTTTGTCCTTAGGATTTTTGAATGGGCACTAAAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCTGCCTTGAGCTGCATGACTATATCCAGGAAGATGGAATACCCTTAGTCCCTGCCTCAGACTCCTaGGTAGCAGGGACTACAGGT | + |
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Preference number: 2 (lower is better) Translates to: SACLELHDYIQEDGIPLVPASDS*VAGTTG Trigger: ACCTGTAGTCCCTGCTACTCAGGAGTCTGAGGCAGG...GACTAAGGGTATTCCATCTTCCTGGATATAGTCATGCAGCTCAAGGCAGGCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR GCA 90 bp | ATAAACAAGAGCAAGGCCTGGAGTCTTATACAGCTTGACCCCAGGAACAAGGAATCACCCAGGCTGGAGTaGAGTGGCAGGATTTCGGCT | + |
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Preference number: 2 (lower is better) Translates to: INKSKAWSLIQLDPRNKESPRLE*SGRISA Trigger: AGCCGAAATCCTGCCACTGCACTCCAGCCTGGGTGA...TTCCTTGTTCCTGGGGTCAAGCTGTATAAGACTCCAGGCCTTGCTCTTGTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTGCCTTGAGCTGCATGACTATATCCAGGAAGATGGAATACCCTTAGTCGCAAGCTCTGTCTCCTaGGTTCACGCCATTCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: SACLELHDYIQEDGIPLVASSVS*VHAILL Trigger: CAGGAGAATGGCGTGAACCCAGGAGACAGAGCTTGC...GACTAAGGGTATTCCATCTTCCTGGATATAGTCATGCAGCTCAAGGCAGGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR TCA 90 bp | GAAACAATTCTCCACAAGAAGCAGGGCAGGCTGCTGGACAGACAAACTGAGAATGCCAGAAAGGTCAGGTaGCACAAGGTTGAATACCGA | + |
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Preference number: 2 (lower is better) Translates to: ETILHKKQGRLLDRQTENARKVR*HKVEYR Trigger: TCGGTATTCAACCTTGTGTCACCTGACCTTTCTGGC...ATTCTCAGTTTGTCTGTCCAGCAGCCTGCCCTGCTTCTTGTGGAGAATTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR GCA 90 bp | GTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGAGAGAGCAGGGACTACAGGTaGCTGCCACCACGTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: VEYRKLALKHSLSERDRESRDYR*LPPRLA Trigger: AGCCAGACGTGGTGGCAGGCACCTGTAGTCCCTGCT...CTCTCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTGCCTTGAGCTGCATGACTATATCCAGGAAGATGGAATACCCTTAGTCAGCAGGGCAGGCTGCTaGACAGACAAACTGAGAATA | + |
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Preference number: 2 (lower is better) Translates to: SACLELHDYIQEDGIPLVSRAGC*TDKLRI Trigger: TATTCTCAGTTTGTCTGTCCAGCAGCCTGCCCTGCT...GACTAAGGGTATTCCATCTTCCTGGATATAGTCATGCAGCTCAAGGCAGGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR CCA 90 bp | GTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGAGAGCAGGCTGGAGTGCAGTaGCAGGATTTCGGCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: VEYRKLALKHSLSERDREQAGVQ*QDFGSL Trigger: CAGTGAGCCGAAATCCTGCCACTGCACTCCAGCCTG...CTCTCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCTGCCTTGAGCTGCATGACTATATCCAGGAAGATGGAATACCCTTAGTCCAGGTGACACAAGGTTaGATACCGAAAGTTGGCATT | + |
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Preference number: 2 (lower is better) Translates to: SACLELHDYIQEDGIPLVQVTQG*IPKVGI Trigger: AATGCCAACTTTCGGTATTCAACCTTGTGTCACCTG...GACTAAGGGTATTCCATCTTCCTGGATATAGTCATGCAGCTCAAGGCAGGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR GCA 90 bp | AAGGTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGATTCACGCCATTCTCCTaGCTCAGACTCCTGAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: KVEYRKLALKHSLSERDRFTPFS*LRLLSS Trigger: GCTACTCAGGAGTCTGAGGCAGGAGAATGGCGTGAA...TCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR CCA 90 bp | CAAGCCCCTGATCCACAGCTTCTACTGGCAGAAATAGTCATCTACTCTTTTAGTCTATATCCAGGAAGATaGAATACCCTTAGTCACAGA | + |
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Preference number: 2 (lower is better) Translates to: QAPDPQLLLAEIVIYSFSLYPGR*NTLSHR Trigger: TCTGTGACTAAGGGTATTCCATCTTCCTGGATATAG...ACTAAAAGAGTAGATGACTATTTCTGCCAGTAGAAGCTGTGGATCAGGGGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR TCA 72 bp | CATAAACAAGAGCAAGGCCTGGAGTCTTATACAGCTTaGCCCCAGGAACAAGGAAGCGAAGCACCCTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: HKQEQGLESYTA*PQEQGSEAPSL Trigger: GAGGGAGGGTGCTTCGCTTCCTTGTTCCTGGGGTCAAGCTGTATAAGACTCCAGGCCTTGCTCTTGTTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR CCA 72 bp | TTTAGTGGTTCCGTTTCAGTCACCTCCATTAGGGTGTaGGCTTTCTCACATGGTGACCACCAGCAGCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: FSGSVSVTSIRV*AFSHGDHQQLP Trigger: TGGAAGCTGCTGGTGGTCACCATGTGAGAAAGCCCACACCCTAATGGAGGTGACTGAAACGGAACCACTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR CAA 90 bp | GAAACAATTCTCCACAAGAAGCAGGGCAGGCTGCTGGACAGACAAACTGAGAATTCAGGTGACACAAGGTaGAATACCGAAAGTTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: ETILHKKQGRLLDRQTENSGDTR*NTESWH Trigger: ATGCCAACTTTCGGTATTCAACCTTGTGTCACCTGA...ATTCTCAGTTTGTCTGTCCAGCAGCCTGCCCTGCTTCTTGTGGAGAATTGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR CAA 90 bp | TCTGCCTGCCTTGAGCTGCATGACTATATCCAGGAAGATGGAATACCCTTAGTCGCATTAAAGCATTCTTaGAGTGAGAGAGACAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: SACLELHDYIQEDGIPLVALKHS*SERDRE Trigger: CTCTCTGTCTCTCTCACTCAAAGAATGCTTTAATGC...GACTAAGGGTATTCCATCTTCCTGGATATAGTCATGCAGCTCAAGGCAGGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR CAA 90 bp | TCTGCCTGCCTTGAGCTGCATGACTATATCCAGGAAGATGGAATACCCTTAGTCATGTGTTCATCAGAATaGTTTCAGGGTTGTATGCGT | + |
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Preference number: 3 (lower is better) Translates to: SACLELHDYIQEDGIPLVMCSSE*FQGCMR Trigger: ACGCATACAACCCTGAAACAATTCTGATGAACACAT...GACTAAGGGTATTCCATCTTCCTGGATATAGTCATGCAGCTCAAGGCAGGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR CAA 90 bp | TCTGCCTGCCTTGAGCTGCATGACTATATCCAGGAAGATGGAATACCCTTAGTCAGAATTGTTTCAGGGTaGTATGCGTTAGTTTTAGGA | + |
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Preference number: 3 (lower is better) Translates to: SACLELHDYIQEDGIPLVRIVSG*YALVLG Trigger: TCCTAAAACTAACGCATACAACCCTGAAACAATTCT...GACTAAGGGTATTCCATCTTCCTGGATATAGTCATGCAGCTCAAGGCAGGCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR CAA 90 bp | GAAACAATTCTCCACAAGAAGCAGGGCAGGCTGCTGGACAGACAAACTGAGAATGTTGAATACCGAAAGTaGGCATTAAAGCATTCTTTG | + |
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Preference number: 3 (lower is better) Translates to: ETILHKKQGRLLDRQTENVEYRK*ALKHSL Trigger: CAAAGAATGCTTTAATGCCAACTTTCGGTATTCAAC...ATTCTCAGTTTGTCTGTCCAGCAGCCTGCCCTGCTTCTTGTGGAGAATTGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| 3UTR-3UTR CAA 90 bp | AAGGTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGAACCTTCCCCTGTCATTaGTTTTGGGTCTATAAATTG | + |
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Preference number: 3 (lower is better) Translates to: KVEYRKLALKHSLSERDRTFPCH*FWVYKL Trigger: CAATTTATAGACCCAAAACAAATGACAGGGGAAGGT...TCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR CCA 90 bp | CAAGCCCCTGATCCACAGCTTCTACTGGCAGAAATAGTCATCTACTCTTTTAGTCCTCCAGCAGCGGGCTaGCGGCGAGGGCCTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QAPDPQLLLAEIVIYSFSPPAAG*RRGPPP Trigger: AGGAGGAGGCCCTCGCCGCCAGCCCGCTGCTGGAGG...ACTAAAAGAGTAGATGACTATTTCTGCCAGTAGAAGCTGTGGATCAGGGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR TCA 90 bp | AGGATTTCGGCTCACTGCAAGCTCTGTCTCCTGGGTTCACGCCATTCTCCTGCCGCCAGAAAGGTCAGGTaGCACAAGGTTGAATACCGA | + |
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Preference number: 4 (lower is better) Translates to: RISAHCKLCLLGSRHSPAARKVR*HKVEYR Trigger: TCGGTATTCAACCTTGTGTCACCTGACCTTTCTGGC...GGCAGGAGAATGGCGTGAACCCAGGAGACAGAGCTTGCAGTGAGCCGAAATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR TCA 90 bp | AGGATTTCGGCTCACTGCAAGCTCTGTCTCCTGGGTTCACGCCATTCTCCTGCCTCTCCCAGGTTCAAGTaGTTCTTATGCCTCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RISAHCKLCLLGSRHSPASPRFK*FLCLSL Trigger: GAGGCTGAGGCATAAGAATCACTTGAACCTGGGAGA...GGCAGGAGAATGGCGTGAACCCAGGAGACAGAGCTTGCAGTGAGCCGAAATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR GCA 90 bp | TCTGCCTGCCTTGAGCTGCATGACTATATCCAGGAAGATGGAATACCCTTAGTCCCTCCTGGATGTCCGTaGTCCTGCCGTCCCCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: SACLELHDYIQEDGIPLVPPGCP*SCRPRR Trigger: TCTTCGGGGACGGCAGGAGCACGGACATCCAGGAGG...GACTAAGGGTATTCCATCTTCCTGGATATAGTCATGCAGCTCAAGGCAGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR GCA 90 bp | CAAGCCCCTGATCCACAGCTTCTACTGGCAGAAATAGTCATCTACTCTTTTAGTCTCGAGATCGCGCGCTaGACCGCCCACTGGAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: QAPDPQLLLAEIVIYSFSLEIAR*TAHWKA Trigger: CGCCTTCCAGTGGGCGGTGCAGCGCGCGATCTCGAG...ACTAAAAGAGTAGATGACTATTTCTGCCAGTAGAAGCTGTGGATCAGGGGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR GCA 90 bp | AGGATTTCGGCTCACTGCAAGCTCTGTCTCCTGGGTTCACGCCATTCTCCTGCCCTGCCTGCCTTGAGCTaGATGACTATATCCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RISAHCKLCLLGSRHSPALPALS*MTISRK Trigger: CTTCCTGGATATAGTCATGCAGCTCAAGGCAGGCAG...GGCAGGAGAATGGCGTGAACCCAGGAGACAGAGCTTGCAGTGAGCCGAAATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR CCA 90 bp | GAAACAATTCTCCACAAGAAGCAGGGCAGGCTGCTGGACAGACAAACTGAGAATGCACGCGGGACGAGGTaGGAACCAAAGCTCCGCTCT | + |
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Preference number: 4 (lower is better) Translates to: ETILHKKQGRLLDRQTENARGTR*EPKLRS Trigger: AGAGCGGAGCTTTGGTTCCCACCTCGTCCCGCGTGC...ATTCTCAGTTTGTCTGTCCAGCAGCCTGCCCTGCTTCTTGTGGAGAATTGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR CCA 90 bp | AGGATTTCGGCTCACTGCAAGCTCTGTCTCCTGGGTTCACGCCATTCTCCTGCCGCCAGCTGGTGGTTTTaGAAATGCATTTCCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: RISAHCKLCLLGSRHSPAASWWF*KCISTS Trigger: GCTGGTGGAAATGCATTTCCAAAACCACCAGCTGGC...GGCAGGAGAATGGCGTGAACCCAGGAGACAGAGCTTGCAGTGAGCCGAAATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR CCA 90 bp | AGGATTTCGGCTCACTGCAAGCTCTGTCTCCTGGGTTCACGCCATTCTCCTGCCAGCAGGGCAGGCTGCTaGACAGACAAACTGAGAATA | + |
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Preference number: 4 (lower is better) Translates to: RISAHCKLCLLGSRHSPASRAGC*TDKLRI Trigger: TATTCTCAGTTTGTCTGTCCAGCAGCCTGCCCTGCT...GGCAGGAGAATGGCGTGAACCCAGGAGACAGAGCTTGCAGTGAGCCGAAATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR CCA 90 bp | ATAAACAAGAGCAAGGCCTGGAGTCTTATACAGCTTGACCCCAGGAACAAGGAACATCGCGGAGACGCCTaGTCACTGCTCTACCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: INKSKAWSLIQLDPRNKEHRGDA*SLLYRC Trigger: GCAGCGGTAGAGCAGTGACCAGGCGTCTCCGCGATG...TTCCTTGTTCCTGGGGTCAAGCTGTATAAGACTCCAGGCCTTGCTCTTGTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR CCA 90 bp | GTGTTCATCAGAATTGTTTCAGGGTTGTATGCGTTAGTTTTAGGATCCAGAGCTCGCTGCACCGCCCACTaGAAGGCGCGCGTCAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: VFIRIVSGLYALVLGSRARCTAH*KARVSR Trigger: ACGGCTGACGCGCGCCTTCCAGTGGGCGGTGCAGCG...AGCTCTGGATCCTAAAACTAACGCATACAACCCTGAAACAATTCTGATGAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR CCA 90 bp | GTGTTCATCAGAATTGTTTCAGGGTTGTATGCGTTAGTTTTAGGATCCAGAGCTGCAGCCTGGCCAGGGTaGCCTCAACGCCCGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VFIRIVSGLYALVLGSRAAAWPG*PQRPSS Trigger: GCTGGACGGGCGTTGAGGCCACCCTGGCCAGGCTGC...AGCTCTGGATCCTAAAACTAACGCATACAACCCTGAAACAATTCTGATGAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR GCA 90 bp | ATAAACAAGAGCAAGGCCTGGAGTCTTATACAGCTTGACCCCAGGAACAAGGAAGGGAAATTCTCTCTCTaGAGCGGCGGAAGTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: INKSKAWSLIQLDPRNKEGKFSL*SGGSPR Trigger: CCGGGGACTTCCGCCGCTGCAGAGAGAGAATTTCCC...TTCCTTGTTCCTGGGGTCAAGCTGTATAAGACTCCAGGCCTTGCTCTTGTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR GCA 90 bp | CAAGCCCCTGATCCACAGCTTCTACTGGCAGAAATAGTCATCTACTCTTTTAGTGGATGTCCGTGCTCCTaGCGTCCCCGAAGAAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: QAPDPQLLLAEIVIYSFSGCPCS*RPRRSR Trigger: GCGACTTCTTCGGGGACGGCAGGAGCACGGACATCC...ACTAAAAGAGTAGATGACTATTTCTGCCAGTAGAAGCTGTGGATCAGGGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR GCA 90 bp | CAAGCCCCTGATCCACAGCTTCTACTGGCAGAAATAGTCATCTACTCTTTTAGTAGCAGGGACTACAGGTaGCTGCCACCACGTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QAPDPQLLLAEIVIYSFSSRDYR*LPPRLA Trigger: AGCCAGACGTGGTGGCAGGCACCTGTAGTCCCTGCT...ACTAAAAGAGTAGATGACTATTTCTGCCAGTAGAAGCTGTGGATCAGGGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR GCA 90 bp | CAAGCCCCTGATCCACAGCTTCTACTGGCAGAAATAGTCATCTACTCTTTTAGTTCACCCAGGCTGGAGTaGAGGGGCATGATCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: QAPDPQLLLAEIVIYSFSSPRLE*RGMISA Trigger: AGCCGAGATCATGCCCCTGCACTCCAGCCTGGGTGA...ACTAAAAGAGTAGATGACTATTTCTGCCAGTAGAAGCTGTGGATCAGGGGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR CCA 90 bp | AAGGTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGAGCGAGGGCCTCCTCCTaGATGTCCGTGCTCCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: KVEYRKLALKHSLSERDRARASS*MSVLLP Trigger: CGGCAGGAGCACGGACATCCAGGAGGAGGCCCTCGC...TCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR TCA 90 bp | GAAACAATTCTCCACAAGAAGCAGGGCAGGCTGCTGGACAGACAAACTGAGAATTATGCCTCAGCCTCCTaGGTAGCTGGTACTATAGGC | + |
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Preference number: 4 (lower is better) Translates to: ETILHKKQGRLLDRQTENYASAS*VAGTIG Trigger: GCCTATAGTACCAGCTACTCAGGAGGCTGAGGCATA...ATTCTCAGTTTGTCTGTCCAGCAGCCTGCCCTGCTTCTTGTGGAGAATTGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR GCA 90 bp | AGGATTTCGGCTCACTGCAAGCTCTGTCTCCTGGGTTCACGCCATTCTCCTGCCTGTTTCAGGGTTGTATaGGTTAGTTTTAGGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: RISAHCKLCLLGSRHSPACFRVV*VSFRIQ Trigger: CTGGATCCTAAAACTAACGCATACAACCCTGAAACA...GGCAGGAGAATGGCGTGAACCCAGGAGACAGAGCTTGCAGTGAGCCGAAATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR TCA 90 bp | AGGATTTCGGCTCACTGCAAGCTCTGTCTCCTGGGTTCACGCCATTCTCCTGCCCATGAAACTCCAGCTTaGATTTACTTAGGCAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: RISAHCKLCLLGSRHSPAHETPA*IYLGKK Trigger: CTTTTTGCCTAAGTAAATTCAAGCTGGAGTTTCATG...GGCAGGAGAATGGCGTGAACCCAGGAGACAGAGCTTGCAGTGAGCCGAAATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR TCA 90 bp | GTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGAGAGCCTGCCTCAGACTCCTaGGTAGCAGGGACTACAGGT | + |
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Preference number: 4 (lower is better) Translates to: VEYRKLALKHSLSERDREPASDS*VAGTTG Trigger: ACCTGTAGTCCCTGCTACTCAGGAGTCTGAGGCAGG...CTCTCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR GCA 90 bp | GTTTCAGGGTTGTATGCGTTAGTTTTAGGATCCAGAGCTTCGCGTGTGCTTTTTTTCACGCCATTCTCCTaGCTCAGACTCCTGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: VSGLYALVLGSRASRVLFFTPFS*LRLLSS Trigger: GCTACTCAGGAGTCTGAGGCAGGAGAATGGCGTGAA...AAAAAGCACACGCGAAGCTCTGGATCCTAAAACTAACGCATACAACCCTGAAAC 48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR GCA 90 bp | GTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGAGAGTCACCCAGGCTGGAGTaGAGTGGCAGGATTTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: VEYRKLALKHSLSERDRESPRLE*SGRISA Trigger: AGCCGAAATCCTGCCACTGCACTCCAGCCTGGGTGA...CTCTCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR TCA 90 bp | AAGGTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGACAGCTTCCAAGCCCCTaGTCCACAGCTTCTACTGGC | + |
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Preference number: 4 (lower is better) Translates to: KVEYRKLALKHSLSERDRQLPSP*STASTG Trigger: GCCAGTAGAAGCTGTGGATCAGGGGCTTGGAAGCTG...TCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR TCA 90 bp | CAAGCCCCTGATCCACAGCTTCTACTGGCAGAAATAGTCATCTACTCTTTTAGTGAGTCTTATACAGCTTaGCCCCAGGAACAAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: QAPDPQLLLAEIVIYSFSESYTA*PQEQGS Trigger: GCTTCCTTGTTCCTGGGGTCAAGCTGTATAAGACTC...ACTAAAAGAGTAGATGACTATTTCTGCCAGTAGAAGCTGTGGATCAGGGGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR GCA 90 bp | GTTTCAGGGTTGTATGCGTTAGTTTTAGGATCCAGAGCTTCGCGTGTGCTTTTTTGGTGGTTTTGGAAATaGATTTCCACCAGCTCCGCC | + |
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Preference number: 4 (lower is better) Translates to: VSGLYALVLGSRASRVLFWWFWK*ISTSSA Trigger: GGCGGAGCTGGTGGAAATGCATTTCCAAAACCACCA...AAAAAGCACACGCGAAGCTCTGGATCCTAAAACTAACGCATACAACCCTGAAAC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR GCA 90 bp | ATAAACAAGAGCAAGGCCTGGAGTCTTATACAGCTTGACCCCAGGAACAAGGAACCCAGCCCTTGCGTGTaGATTTCTTTATTCCGGATT | + |
|
Preference number: 4 (lower is better) Translates to: INKSKAWSLIQLDPRNKEPSPCV*ISLFRI Trigger: AATCCGGAATAAAGAAATGCACACGCAAGGGCTGGG...TTCCTTGTTCCTGGGGTCAAGCTGTATAAGACTCCAGGCCTTGCTCTTGTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR CCA 90 bp | AAGGTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGACAGGCTGGAGTGCAGTaGCAGGATTTCGGCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KVEYRKLALKHSLSERDRQAGVQ*QDFGSL Trigger: CAGTGAGCCGAAATCCTGCCACTGCACTCCAGCCTG...TCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR GCA 90 bp | GTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGAGAGAGAAGCAGGGCAGGCTaGTGGACAGACAAACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VEYRKLALKHSLSERDRERSRAG*WTDKLR Trigger: TCTCAGTTTGTCTGTCCAGCAGCCTGCCCTGCTTCT...CTCTCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR TCA 90 bp | CAAGCCCCTGATCCACAGCTTCTACTGGCAGAAATAGTCATCTACTCTTTTAGTCAGGTGACACAAGGTTaGATACCGAAAGTTGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QAPDPQLLLAEIVIYSFSQVTQG*IPKVGI Trigger: AATGCCAACTTTCGGTATTCAACCTTGTGTCACCTG...ACTAAAAGAGTAGATGACTATTTCTGCCAGTAGAAGCTGTGGATCAGGGGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR CCA 90 bp | GTTTCAGGGTTGTATGCGTTAGTTTTAGGATCCAGAGCTTCGCGTGTGCTTTTTGTTCTAGCCAGCTGGTaGTTTTGGAAATGCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSGLYALVLGSRASRVLFVLASW*FWKCIS Trigger: GGAAATGCATTTCCAAAACCACCAGCTGGCTAGAAC...AAAAAGCACACGCGAAGCTCTGGATCCTAAAACTAACGCATACAACCCTGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR CCA 90 bp | GTGTTCATCAGAATTGTTTCAGGGTTGTATGCGTTAGTTTTAGGATCCAGAGCTACCTCCATTAGGGTGTaGGCTTTCTCACATGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VFIRIVSGLYALVLGSRATSIRV*AFSHGD Trigger: GTCACCATGTGAGAAAGCCCACACCCTAATGGAGGT...AGCTCTGGATCCTAAAACTAACGCATACAACCCTGAAACAATTCTGATGAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR CCA 90 bp | ATAAACAAGAGCAAGGCCTGGAGTCTTATACAGCTTGACCCCAGGAACAAGGAATCATCTTTTGGGCTTTaGGAGTCTGATGTAATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: INKSKAWSLIQLDPRNKESSFGL*ESDVIS Trigger: GGAAATTACATCAGACTCCCAAAGCCCAAAAGATGA...TTCCTTGTTCCTGGGGTCAAGCTGTATAAGACTCCAGGCCTTGCTCTTGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR CCA 90 bp | CAAGCCCCTGATCCACAGCTTCTACTGGCAGAAATAGTCATCTACTCTTTTAGTAAAGTTCTAGCCAGCTaGTGGTTTTGGAAATGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QAPDPQLLLAEIVIYSFSKVLAS*WFWKCI Trigger: AATGCATTTCCAAAACCACCAGCTGGCTAGAACTTT...ACTAAAAGAGTAGATGACTATTTCTGCCAGTAGAAGCTGTGGATCAGGGGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| 3UTR CAA 72 bp | GCAAAGCATAATGTGTTCATCAGAATTGTTTCAGGGTaGTATGCGTTAGTTTTAGGATCCAGAGCTTCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AKHNVFIRIVSG*YALVLGSRASR Trigger: ACGCGAAGCTCTGGATCCTAAAACTAACGCATACAACCCTGAAACAATTCTGATGAACACATTATGCTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR GCA 90 bp | ATAAACAAGAGCAAGGCCTGGAGTCTTATACAGCTTGACCCCAGGAACAAGGAATACTCCTTTTTCAATTaGTGCACTTTCATGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: INKSKAWSLIQLDPRNKEYSFFN*CTFMFR Trigger: CCTAAACATGAAAGTGCAGCAATTGAAAAAGGAGTA...TTCCTTGTTCCTGGGGTCAAGCTGTATAAGACTCCAGGCCTTGCTCTTGTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR CCA 90 bp | GTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGAGAGCTATATCCAGGAAGATaGAATACCCTTAGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VEYRKLALKHSLSERDRELYPGR*NTLSHR Trigger: TCTGTGACTAAGGGTATTCCATCTTCCTGGATATAG...CTCTCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR TCA 90 bp | AAGGTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGAAAAGCATTCTTTGAGTaGGAGAGACAGAGAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: KVEYRKLALKHSLSERDRKAFFE*ERQREI Trigger: AATCTCTCTCTGTCTCTCTCACTCAAAGAATGCTTT...TCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| 3UTR CAA 72 bp | AAGGTTGAATACCGAAAGTTGGCATTAAAGCATTCTTaGAGTGAGAGAGACAGAGAGAGATTTATCTATAGT | + |
|
Preference number: 4 (lower is better) Translates to: KVEYRKLALKHS*SERDRERFIYS Trigger: ACTATAGATAAATCTCTCTCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAACCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS GCA 90 bp | GTCCAGCTCTGCTCCTCCCGCGCCGCCGCCGCCGCCGCCGCCTCCTaGACGCGCCTCGAGATCGCGCGCTGCACCGCCCACTGGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VQLCSSRAAAAAAAS*TRLEIARCTAHWKA Trigger: CGCCTTCCAGTGGGCGGTGCAGCGCGCGATCTCGAGGCGCGTGCAGGAGGCGGCGGCGGCGGCGGCGGCGCGGGAGGAGCAGAGCTGGAC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS CCA 90 bp | GCCGCCTCCTGCACGCGCCTCGAGATCGCGCGCTGCACCGCCCACTaGAAGGCGCGCGTCAGCCGTCGTCTGAGGTCCTCCAGCAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: AASCTRLEIARCTAH*KARVSRRLRSSSSG Trigger: CCCGCTGCTGGAGGACCTCAGACGACGGCTGACGCGCGCCTTCCAGTGGGCGGTGCAGCGCGCGATCTCGAGGCGCGTGCAGGAGGCGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS GCA 90 bp | CCTCCAGCAGCGGGCTGGCGGCGAGGGCCTCCTCCTGGATGTCCGTaGTCCTGCCGTCCCCGAAGAAGTCGCACGCGGGACGAGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PPAAGWRRGPPPGCP*SCRPRRSRTRDEVG Trigger: TCCCACCTCGTCCCGCGTGCGACTTCTTCGGGGACGGCAGGAGCACGGACATCCAGGAGGAGGCCCTCGCCGCCAGCCCGCTGCTGGAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS CCA 90 bp | CGTCTGAGGTCCTCCAGCAGCGGGCTGGCGGCGAGGGCCTCCTCCTaGATGTCCGTGCTCCTGCCGTCCCCGAAGAAGTCGCACGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLRSSSSGLAARASS*MSVLLPSPKKSHAG Trigger: TCCCGCGTGCGACTTCTTCGGGGACGGCAGGAGCACGGACATCCAGGAGGAGGCCCTCGCCGCCAGCCCGCTGCTGGAGGACCTCAGACG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS GCA 90 bp | GCAGCGGGCTGGCGGCGAGGGCCTCCTCCTGGATGTCCGTGCTCCTaGCGTCCCCGAAGAAGTCGCACGCGGGACGAGGTGGGAACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AAGWRRGPPPGCPCS*RPRRSRTRDEVGTK Trigger: TTTGGTTCCCACCTCGTCCCGCGTGCGACTTCTTCGGGGACGGCAGGAGCACGGACATCCAGGAGGAGGCCCTCGCCGCCAGCCCGCTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS CCA 90 bp | GTCCGTGCTCCTGCCGTCCCCGAAGAAGTCGCACGCGGGACGAGGTaGGAACCAAAGCTCCGCTCTACCTGGGAGTCCCTGGAGCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VRAPAVPEEVARGTR*EPKLRSTWESLEPL Trigger: CAGGGGCTCCAGGGACTCCCAGGTAGAGCGGAGCTTTGGTTCCCACCTCGTCCCGCGTGCGACTTCTTCGGGGACGGCAGGAGCACGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS CCA 90 bp | GAAGTCGCACGCGGGACGAGGTGGGAACCAAAGCTCCGCTCTACCTaGGAGTCCCTGGAGCCCCTGGGAAATTCTCTCTCTGCAGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EVARGTRWEPKLRST*ESLEPLGNSLSAAA Trigger: CGCCGCTGCAGAGAGAGAATTTCCCAGGGGCTCCAGGGACTCCCAGGTAGAGCGGAGCTTTGGTTCCCACCTCGTCCCGCGTGCGACTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR CAA 90 bp | AGGATTTCGGCTCACTGCAAGCTCTGTCTCCTGGGTTCACGCCATTCTCCTGCCTCGCAGCATCATCTTTaGGGCTTTGGGAGTCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RISAHCKLCLLGSRHSPASQHHL*GFGSLM Trigger: CATCAGACTCCCAAAGCCCAAAAGATGATGCTGCGA...GGCAGGAGAATGGCGTGAACCCAGGAGACAGAGCTTGCAGTGAGCCGAAATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS CCA 90 bp | AATTGCTGCACTTTCATGTTTAGGTCCAGTAAAGTTCTAGCCAGCTaGTGGTTTTGGAAATGCATTTCCACCAGCTCCGCCCGCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: NCCTFMFRSSKVLAS*WFWKCISTSSARSL Trigger: CAGGCTGCGGGCGGAGCTGGTGGAAATGCATTTCCAAAACCACCAGCTGGCTAGAACTTTACTGGACCTAAACATGAAAGTGCAGCAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
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| CDS-3UTR CAA 90 bp | CAAGCCCCTGATCCACAGCTTCTACTGGCAGAAATAGTCATCTACTCTTTTAGTCACCGCGCCCAGCCCTaGCGTGTGCATTTCTTTATT | + |
|
Preference number: 5 (lower is better) Translates to: QAPDPQLLLAEIVIYSFSHRAQP*RVHFFI Trigger: AATAAAGAAATGCACACGCAAGGGCTGGGCGCGGTG...ACTAAAAGAGTAGATGACTATTTCTGCCAGTAGAAGCTGTGGATCAGGGGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR CAA 90 bp | ATAAACAAGAGCAAGGCCTGGAGTCTTATACAGCTTGACCCCAGGAACAAGGAAAGCCAGCTGGTGGTTTaGGAAATGCATTTCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: INKSKAWSLIQLDPRNKESQLVV*EMHFHQ Trigger: CTGGTGGAAATGCATTTCCAAAACCACCAGCTGGCT...TTCCTTGTTCCTGGGGTCAAGCTGTATAAGACTCCAGGCCTTGCTCTTGTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR CAA 90 bp | GAAACAATTCTCCACAAGAAGCAGGGCAGGCTGCTGGACAGACAAACTGAGAATGCATTAAAGCATTCTTaGAGTGAGAGAGACAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ETILHKKQGRLLDRQTENALKHS*SERDRE Trigger: CTCTCTGTCTCTCTCACTCAAAGAATGCTTTAATGC...ATTCTCAGTTTGTCTGTCCAGCAGCCTGCCCTGCTTCTTGTGGAGAATTGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR CAA 90 bp | ATAAACAAGAGCAAGGCCTGGAGTCTTATACAGCTTGACCCCAGGAACAAGGAATCAGGTGACACAAGGTaGAATACCGAAAGTTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: INKSKAWSLIQLDPRNKESGDTR*NTESWH Trigger: ATGCCAACTTTCGGTATTCAACCTTGTGTCACCTGA...TTCCTTGTTCCTGGGGTCAAGCTGTATAAGACTCCAGGCCTTGCTCTTGTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR CAA 90 bp | AAGGTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGAACCCATCTGCCTGCCTaGAGCTGCATGACTATATCC | + |
|
Preference number: 5 (lower is better) Translates to: KVEYRKLALKHSLSERDRTHLPA*SCMTIS Trigger: GGATATAGTCATGCAGCTCAAGGCAGGCAGATGGGT...TCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR CAA 90 bp | GTTGAATACCGAAAGTTGGCATTAAAGCATTCTTTGAGTGAGAGAGACAGAGAGGGAGTCTTATACAGCTaGACCCCAGGAACAAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VEYRKLALKHSLSERDREGVLYS*TPGTRK Trigger: CTTCCTTGTTCCTGGGGTCAAGCTGTATAAGACTCC...CTCTCTGTCTCTCTCACTCAAAGAATGCTTTAATGCCAACTTTCGGTATTCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS-3UTR CAA 90 bp | ATAAACAAGAGCAAGGCCTGGAGTCTTATACAGCTTGACCCCAGGAACAAGGAAACCTTCCCCTGTCATTaGTTTTGGGTCTATAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: INKSKAWSLIQLDPRNKETFPCH*FWVYKL Trigger: CAATTTATAGACCCAAAACAAATGACAGGGGAAGGT...TTCCTTGTTCCTGGGGTCAAGCTGTATAAGACTCCAGGCCTTGCTCTTGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS GCA 90 bp | TGGGAGTCTGATGTAATTTCCAGTTCATACTCCTTTTTCAATTGCTaGACTTTCATGTTTAGGTCCAGTAAAGTTCTAGCCAGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WESDVISSSYSFFNC*TFMFRSSKVLASWW Trigger: CCACCAGCTGGCTAGAACTTTACTGGACCTAAACATGAAAGTGCAGCAATTGAAAAAGGAGTATGAACTGGAAATTACATCAGACTCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378279.4 ENST00000523536.1 |
||
| CDS GCA 90 bp | CTTTGGGAGTCTGATGTAATTTCCAGTTCATACTCCTTTTTCAATTaGTGCACTTTCATGTTTAGGTCCAGTAAAGTTCTAGCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWESDVISSSYSFFN*CTFMFRSSKVLASW Trigger: CCAGCTGGCTAGAACTTTACTGGACCTAAACATGAAAGTGCAGCAATTGAAAAAGGAGTATGAACTGGAAATTACATCAGACTCCCAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378279.4 ENST00000523536.1 |
||
| CDS-3UTR CAA 90 bp | GTTTCAGGGTTGTATGCGTTAGTTTTAGGATCCAGAGCTTCGCGTGTGCTTTTTAGAATTGTTTCAGGGTaGTATGCGTTAGTTTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSGLYALVLGSRASRVLFRIVSG*YALVLG Trigger: TCCTAAAACTAACGCATACAACCCTGAAACAATTCT...AAAAAGCACACGCGAAGCTCTGGATCCTAAAACTAACGCATACAACCCTGAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS TCA 90 bp | TCTTTATTCCGGATTCGCAGCATCATCTTTTGGGCTTTGGGAGTCTaGTGTAATTTCCAGTTCATACTCCTTTTTCAATTGCTGCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLFRIRSIIFWALGV*CNFQFILLFQLLHF Trigger: AAAGTGCAGCAATTGAAAAAGGAGTATGAACTGGAAATTACATCAGACTCCCAAAGCCCAAAAGATGATGCTGCGAATCCGGAATAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378279.4 ENST00000523536.1 |
||
| CDS CCA 90 bp | TGTGCATTTCTTTATTCCGGATTCGCAGCATCATCTTTTGGGCTTTaGGAGTCTGATGTAATTTCCAGTTCATACTCCTTTTTCAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: CAFLYSGFAASSFGL*ESDVISSSYSFFNC Trigger: GCAATTGAAAAAGGAGTATGAACTGGAAATTACATCAGACTCCCAAAGCCCAAAAGATGATGCTGCGAATCCGGAATAAAGAAATGCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378279.4 ENST00000523536.1 |
||
| CDS-3UTR CAA 90 bp | GTGTTCATCAGAATTGTTTCAGGGTTGTATGCGTTAGTTTTAGGATCCAGAGCTATGTGTTCATCAGAATaGTTTCAGGGTTGTATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: VFIRIVSGLYALVLGSRAMCSSE*FQGCMR Trigger: ACGCATACAACCCTGAAACAATTCTGATGAACACAT...AGCTCTGGATCCTAAAACTAACGCATACAACCCTGAAACAATTCTGATGAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS GCA 72 bp | GCCGCCGCCTCCTGCACGCGCCTCGAGATCGCGCGCTaGACCGCCCACTGGAAGGCGCGCGTCAGCCGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: AAASCTRLEIAR*TAHWKARVSRR Trigger: ACGACGGCTGACGCGCGCCTTCCAGTGGGCGGTGCAGCGCGCGATCTCGAGGCGCGTGCAGGAGGCGGCGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS GCA 72 bp | GCGGGCTGGCGGCGAGGGCCTCCTCCTGGATGTCCGTaGTCCTGCCGTCCCCGAAGAAGTCGCACGCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: AGWRRGPPPGCP*SCRPRRSRTRD Trigger: GTCCCGCGTGCGACTTCTTCGGGGACGGCAGGAGCACGGACATCCAGGAGGAGGCCCTCGCCGCCAGCCCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS CCA 72 bp | TGCACGCGCCTCGAGATCGCGCGCTGCACCGCCCACTaGAAGGCGCGCGTCAGCCGTCGTCTGAGGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CTRLEIARCTAH*KARVSRRLRSS Trigger: GGAGGACCTCAGACGACGGCTGACGCGCGCCTTCCAGTGGGCGGTGCAGCGCGCGATCTCGAGGCGCGTGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS GCA 72 bp | TGGCGGCGAGGGCCTCCTCCTGGATGTCCGTGCTCCTaGCGTCCCCGAAGAAGTCGCACGCGGGACGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WRRGPPPGCPCS*RPRRSRTRDEV Trigger: CACCTCGTCCCGCGTGCGACTTCTTCGGGGACGGCAGGAGCACGGACATCCAGGAGGAGGCCCTCGCCGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS CCA 72 bp | CCTGCCGTCCCCGAAGAAGTCGCACGCGGGACGAGGTaGGAACCAAAGCTCCGCTCTACCTGGGAGTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PAVPEEVARGTR*EPKLRSTWESL Trigger: CAGGGACTCCCAGGTAGAGCGGAGCTTTGGTTCCCACCTCGTCCCGCGTGCGACTTCTTCGGGGACGGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS CCA 72 bp | CAAAGCTCCGCTCTACCTGGGAGTCCCTGGAGCCCCTaGGAAATTCTCTCTCTGCAGCGGCGGAAGTCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: QSSALPGSPWSP*EILSLQRRKSP Trigger: CGGGGACTTCCGCCGCTGCAGAGAGAGAATTTCCCAGGGGCTCCAGGGACTCCCAGGTAGAGCGGAGCTTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS CCA 72 bp | CGCGGGACGAGGTGGGAACCAAAGCTCCGCTCTACCTaGGAGTCCCTGGAGCCCCTGGGAAATTCTCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RGTRWEPKLRST*ESLEPLGNSLS Trigger: AGAGAGAGAATTTCCCAGGGGCTCCAGGGACTCCCAGGTAGAGCGGAGCTTTGGTTCCCACCTCGTCCCGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378279.4 |
||
| CDS TCA 72 bp | CGGATTCGCAGCATCATCTTTTGGGCTTTGGGAGTCTaGTGTAATTTCCAGTTCATACTCCTTTTTCAATTG | + |
|
Preference number: 6 (lower is better) Translates to: RIRSIIFWALGV*CNFQFILLFQL Trigger: CAATTGAAAAAGGAGTATGAACTGGAAATTACATCAGACTCCCAAAGCCCAAAAGATGATGCTGCGAATCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378279.4 ENST00000523536.1 |
||
| CDS CCA 72 bp | CTTTATTCCGGATTCGCAGCATCATCTTTTGGGCTTTaGGAGTCTGATGTAATTTCCAGTTCATACTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LYSGFAASSFGL*ESDVISSSYSF Trigger: AAAGGAGTATGAACTGGAAATTACATCAGACTCCCAAAGCCCAAAAGATGATGCTGCGAATCCGGAATAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378279.4 ENST00000523536.1 |
||
| CDS GCA 72 bp | GATGTAATTTCCAGTTCATACTCCTTTTTCAATTGCTaGACTTTCATGTTTAGGTCCAGTAAAGTTCTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: DVISSSYSFFNC*TFMFRSSKVLA Trigger: GGCTAGAACTTTACTGGACCTAAACATGAAAGTGCAGCAATTGAAAAAGGAGTATGAACTGGAAATTACATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378279.4 ENST00000523536.1 |
||
| CDS GCA 72 bp | TCTGATGTAATTTCCAGTTCATACTCCTTTTTCAATTaGTGCACTTTCATGTTTAGGTCCAGTAAAGTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SDVISSSYSFFN*CTFMFRSSKVL Trigger: TAGAACTTTACTGGACCTAAACATGAAAGTGCAGCAATTGAAAAAGGAGTATGAACTGGAAATTACATCAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378279.4 ENST00000523536.1 |
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