RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AAAS (Homo sapiens)

Ensembl gene IDs: ENSG00000094914

Ensembl transcript IDs: ENST00000209873.9, ENST00000394384.7, ENST00000546393.7, ENST00000546562.6, ENST00000546572.1, ENST00000547238.6, ENST00000547520.6, ENST00000547757.2, ENST00000547761.6, ENST00000548258.5, ENST00000548880.2, ENST00000548931.6, ENST00000549450.6, ENST00000549821.5, ENST00000549983.5, ENST00000550033.5, ENST00000550286.5, ENST00000551724.5, ENST00000552161.6, ENST00000552876.5, ENST00000672797.1, ENST00000672900.1

Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGGCCCTCAGCTTCTCCATCCAACTCCTGGAAGCCCCAGCAGCCTaGCGCACTCACCACACTGAGCAGGGCCCCTTTGTTGAAGGAAGG +
Preference number: 1 (lower is better)
Translates to: KALSFSIQLLEAPAA*RTHHTEQGPFVEGR
Trigger: CCTTCCTTCAACAAAGGGGCCCTGCTCAGTGTGGTGAGTGCGCCAGGCTGCTGGGGCTTCCAGGAGTTGGATGGAGAAGCTGAGGGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR CCA 90 bp CAGAACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTaGGGATGTCTCAGTAAAGAGGGGCAGGTCATGAATAGAGCCTCC +
Preference number: 1 (lower is better)
Translates to: QNRWWPWERVPRGRG*GCLSKEGQVMNRAS
Trigger: GGAGGCTCTATTCATGACCTGCCCCTCTTTACTGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR CCA 90 bp CTGTGGACCAGCCCTGCAGAGAAGGGAAAGAAAAGGATCAGAGTCTaGGCCCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAG +
Preference number: 1 (lower is better)
Translates to: LWTSPAEKGKKRIRV*AQRRATWQSHTAAK
Trigger: CTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTTCTTTCCCTTCTCTGCAGGGCTGGTCCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR CCA 90 bp CTGAGCAGGGCCCCTTTGTTGAAGGAAGGATGGAAAGTGATGAGCTaGGGCTGGGCTCCTGGCTCCCCCTGGATAATGCCACTAGAAGAA +
Preference number: 1 (lower is better)
Translates to: LSRAPLLKEGWKVMS*GWAPGSPWIMPLEE
Trigger: TTCTTCTAGTGGCATTATCCAGGGGGAGCCAGGAGCCCAGCCCCAGCTCATCACTTTCCATCCTTCCTTCAACAAAGGGGCCCTGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR CCA 90 bp GAGCAGGCAACCGGAGGCAAGAAGGGAGCTGAATGTAGTGGGATGTaGGTTTGTTTGTGCAGGAAGGCTGGTGAGAAGTCCAGACCTAAG +
Preference number: 1 (lower is better)
Translates to: EQATGGKKGAECSGM*VCLCRKAGEKSRPK
Trigger: CTTAGGTCTGGACTTCTCACCAGCCTTCCTGCACAAACAAACCCACATCCCACTACATTCAGCTCCCTTCTTGCCTCCGGTTGCCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR-3UTR CCA 90 bp CCCAGCAGGGGGTTCCTGGGCCCGCCCAAGCACTGGGCTAAAACGTGGAAACTGCTGGGGCTGGGCTCCTaGCTCCCCCTGGATAATGCC +
Preference number: 2 (lower is better)
Translates to: PSRGFLGPPKHWAKTWKLLGLGS*LPLDNA
Trigger: GGCATTATCCAGGGGGAGCCAGGAGCCCAGCCCCAG...CAGTTTCCACGTTTTAGCCCAGTGCTTGGGCGGGCCCAGGAACCCCCTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR-3UTR CCA 90 bp CCCAGCAGGGGGTTCCTGGGCCCGCCCAAGCACTGGGCTAAAACGTGGAAACTGGAAGCCCCAGCAGCCTaGCGCACTCACCACACTGAG +
Preference number: 2 (lower is better)
Translates to: PSRGFLGPPKHWAKTWKLEAPAA*RTHHTE
Trigger: CTCAGTGTGGTGAGTGCGCCAGGCTGCTGGGGCTTC...CAGTTTCCACGTTTTAGCCCAGTGCTTGGGCGGGCCCAGGAACCCCCTGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR-3UTR CCA 90 bp CCCAGCAGGGGGTTCCTGGGCCCGCCCAAGCACTGGGCTAAAACGTGGAAACTGCAAAGAAGGGCCACCTaGCAGAGCCATACAGCAGCC +
Preference number: 2 (lower is better)
Translates to: PSRGFLGPPKHWAKTWKLQRRAT*QSHTAA
Trigger: GGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTG...CAGTTTCCACGTTTTAGCCCAGTGCTTGGGCGGGCCCAGGAACCCCCTGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR-3UTR CCA 90 bp ACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCAAAGTACAGCGGGATGTaGGCAATTCGGCCTGTGGAC +
Preference number: 2 (lower is better)
Translates to: TGGGPGRGSQGAEVGDVSKYSGM*AIRPVD
Trigger: GTCCACAGGCCGAATTGCCCACATCCCGCTGTACTT...TGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR-3UTR CCA 90 bp AAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCAGCTTCTCCATGGAAAGTGATGAGCTaGGGCTGGGCTCCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: KEGPPGRAIQQPRPSASPWKVMS*GWAPGS
Trigger: GGAGCCAGGAGCCCAGCCCCAGCTCATCACTTTCCA...TGGAGAAGCTGAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR-3UTR CCA 90 bp AGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTGCTCCTGGCTCCCCCTaGATAATGCCACTAGAAGAA +
Preference number: 2 (lower is better)
Translates to: SLGPKKGHLAEPYSSQGPAPGSP*IMPLEE
Trigger: TTCTTCTAGTGGCATTATCCAGGGGGAGCCAGGAGC...AGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR-3UTR CCA 90 bp GGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCAGTACTAAAACGTGGAAACTaGGCATTGACAAAGTACAGC +
Preference number: 2 (lower is better)
Translates to: GGGPGRGSQGAEVGDVSVLKRGN*ALTKYS
Trigger: GCTGTACTTTGTCAATGCCCAGTTTCCACGTTTTAG...TACTGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR-3UTR CCA 90 bp TGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCAGTAAAGAGCACTGGGCTAAAACGTaGAAACTGGGCATTGACAAA +
Preference number: 2 (lower is better)
Translates to: WPWERVPRGRGWGCLSKEHWAKT*KLGIDK
Trigger: TTTGTCAATGCCCAGTTTCCACGTTTTAGCCCAGTG...CTCTTTACTGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR-3UTR CCA 90 bp GGGAAAGAAAAGGATCAGAGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCAGAATGTAGTGGGATGTaGGTTTGTTTGTGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: GKEKDQSLGPKKGHLAEPECSGM*VCLCRK
Trigger: CTTCCTGCACAAACAAACCCACATCCCACTACATTC...TGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTTCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR-3UTR CAA 90 bp GTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCGGGATGTGGGTTTGTTaGTGCAGGAAGGCTGGTGAG +
Preference number: 3 (lower is better)
Translates to: VWAQRRATWQSHTAAKALGMWVC*CRKAGE
Trigger: CTCACCAGCCTTCCTGCACAAACAAACCCACATCCC...GAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR CCA 72 bp AGCTTCTCCATCCAACTCCTGGAAGCCCCAGCAGCCTaGCGCACTCACCACACTGAGCAGGGCCCCTTTGTT +
Preference number: 3 (lower is better)
Translates to: SFSIQLLEAPAA*RTHHTEQGPFV
Trigger: AACAAAGGGGCCCTGCTCAGTGTGGTGAGTGCGCCAGGCTGCTGGGGCTTCCAGGAGTTGGATGGAGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR-3UTR CAA 90 bp GAACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTAGCAGGGCCCCTTTGTaGAAGGAAGGATGGAAAGTG +
Preference number: 3 (lower is better)
Translates to: EQVVALGEGPKGQRLGMSSRAPL*KEGWKV
Trigger: CACTTTCCATCCTTCCTTCAACAAAGGGGCCCTGCT...AGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR-3UTR CAA 90 bp CCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCAGCTTCTCCTGAGCAGGGCCCCTTaGTTGAAGGAAGGATGGAAA +
Preference number: 3 (lower is better)
Translates to: PKKGHLAEPYSSQGPQLLLSRAP*LKEGWK
Trigger: TTTCCATCCTTCCTTCAACAAAGGGGCCCTGCTCAG...GAGAAGCTGAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
3UTR CCA 72 bp AAAAGGATCAGAGTCTGGGCCCAAAGAAGGGCCACCTaGCAGAGCCATACAGCAGCCAAGGCCCTCAGCTTC +
Preference number: 3 (lower is better)
Translates to: KRIRVWAQRRAT*QSHTAAKALSF
Trigger: GAAGCTGAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR GCA 90 bp ACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCAGGCCCATCGACAGAGTaGCAGGGCCCAGCCGGATGC +
Preference number: 4 (lower is better)
Translates to: TGGGPGRGSQGAEVGDVSGPSTE*QGPAGC
Trigger: GCATCCGGCTGGGCCCTGGCACTCTGTCGATGGGCC...TGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp CCCAGCAGGGGGTTCCTGGGCCCGCCCAAGCACTGGGCTAAAACGTGGAAACTGAACAGGTGGTGGCCCTaGGAGAGGGTCCCAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PSRGFLGPPKHWAKTWKLNRWWP*ERVPRG
Trigger: GCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGTT...CAGTTTCCACGTTTTAGCCCAGTGCTTGGGCGGGCCCAGGAACCCCCTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp CCCAGCAGGGGGTTCCTGGGCCCGCCCAAGCACTGGGCTAAAACGTGGAAACTGGGGCAGAACAGGTGGTaGCCCTGGGAGAGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: PSRGFLGPPKHWAKTWKLGQNRW*PWERVP
Trigger: TGGGACCCTCTCCCAGGGCCACCACCTGTTCTGCCC...CAGTTTCCACGTTTTAGCCCAGTGCTTGGGCGGGCCCAGGAACCCCCTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp GGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCAGTATCCCAGACCATGGAGTaGGCCTCTCCCCCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: GGGPGRGSQGAEVGDVSVSQTME*ASPPSL
Trigger: GAGGCTTGGGGGAGAGGCTCACTCCATGGTCTGGGA...TACTGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp AACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCGGTGTATGCCCAGGGTaGGACAGCACTTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: NRWWPWERVPRGRGWGCLGVCPG*DSTWAQ
Trigger: CTGTGCCCAAGTGCTGTCTCACCCTGGGCATACACC...GAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp GGGAAAGAAAAGGATCAGAGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCACCAGCAGGGGGTTCCTaGGCCCGCCCAAGCACTGGG +
Preference number: 4 (lower is better)
Translates to: GKEKDQSLGPKKGHLAEPPAGGS*ARPSTG
Trigger: CCCAGTGCTTGGGCGGGCCCAGGAACCCCCTGCTGG...TGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTTCTTTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp ACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCAAAGAGGGGCAGGTCATaGATAGAGCCTCCACCCCCA +
Preference number: 4 (lower is better)
Translates to: TGGGPGRGSQGAEVGDVSKRGRS*IEPPPP
Trigger: TGGGGGTGGAGGCTCTATTCATGACCTGCCCCTCTT...TGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR GCA 90 bp ACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCACTGCCCCTGTCACACTaGCTCCTTTCCCCAGTAGTC +
Preference number: 4 (lower is better)
Translates to: TGGGPGRGSQGAEVGDVSLPLSH*LLSPVV
Trigger: GACTACTGGGGAAAGGAGGCAGTGTGACAGGGGCAG...TGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp AGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCCAGACGTTCCCCACTaGGGTCCCAGACCATGGAGT +
Preference number: 4 (lower is better)
Translates to: SLGPKKGHLAEPYSSQGPPDVPH*GPRPWS
Trigger: ACTCCATGGTCTGGGACCCCAGTGGGGAACGTCTGG...AGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp ACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCAGGCCCGCCCAAGCACTaGGCTAAAACGTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: TGGGPGRGSQGAEVGDVSGPPKH*AKTWKL
Trigger: CAGTTTCCACGTTTTAGCCCAGTGCTTGGGCGGGCC...TGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp AACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCCAAAGAAGGGCCACCTaGCAGAGCCATACAGCAGCC +
Preference number: 4 (lower is better)
Translates to: NRWWPWERVPRGRGWGCLQRRAT*QSHTAA
Trigger: GGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTG...GAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp GAACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTGCTCCCGGTGATGGATaGAGGCAGTTCTTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: EQVVALGEGPKGQRLGMSAPGDG*RQFLCH
Trigger: ATGGCACAAGAACTGCCTTCATCCATCACCGGGAGC...AGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp AAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCAGCTTCTCCACTCCGCCAGACTCTGTaGCCCTGCCCCTGTCACACT +
Preference number: 4 (lower is better)
Translates to: KEGPPGRAIQQPRPSASPLRQTL*PCPCHT
Trigger: AGTGTGACAGGGGCAGGGTCACAGAGTCTGGCGGAG...TGGAGAAGCTGAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR GCA 90 bp CCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCAGCTTCTCGACGCCACATTTCGCTaGAGCCGGTGCTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PKKGHLAEPYSSQGPQLLDATFR*SRCFRE
Trigger: CTCCCTGAAGCACCGGCTGCAGCGAAATGTGGCGTC...GAGAAGCTGAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR GCA 90 bp TGTCTCAGTAAAGAGGGGCAGGTCATGAATAGAGCCTCCACCCCCAGCAGGGGGGCCCTTCTAGCCTCCTaGCGGGGCCAAGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: CLSKEGQVMNRASTPSRGALLAS*RGQAVS
Trigger: GGAAACAGCTTGGCCCCGGCAGGAGGCTAGAAGGGC...CCCCCTGCTGGGGGTGGAGGCTCTATTCATGACCTGCCCCTCTTTACTGAGACA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp CCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCAGCTTCTCTGGAAAGTGATGAGCTaGGGCTGGGCTCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PKKGHLAEPYSSQGPQLLWKVMS*GWAPGS
Trigger: GGAGCCAGGAGCCCAGCCCCAGCTCATCACTTTCCA...GAGAAGCTGAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp GGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCAGTAAAGTACAGCGGGATGTaGGCAATTCGGCCTGTGGAC +
Preference number: 4 (lower is better)
Translates to: GGGPGRGSQGAEVGDVSVKYSGM*AIRPVD
Trigger: GTCCACAGGCCGAATTGCCCACATCCCGCTGTACTT...TACTGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp CCCAGCAGGGGGTTCCTGGGCCCGCCCAAGCACTGGGCTAAAACGTGGAAACTGGACACAGGTCTCTGTTaGGACATCCCATACCCGGAT +
Preference number: 4 (lower is better)
Translates to: PSRGFLGPPKHWAKTWKLDTGLC*DIPYPD
Trigger: ATCCGGGTATGGGATGTCTCAACAGAGACCTGTGTC...CAGTTTCCACGTTTTAGCCCAGTGCTTGGGCGGGCCCAGGAACCCCCTGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp AACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCGACTCGAAAGACAGCTaGAGGAGTGGTAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: NRWWPWERVPRGRGWGCLDSKDS*RSGSQD
Trigger: ATCCTGGCTACCACTCCTTCAGCTGTCTTTCGAGTC...GAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR GCA 90 bp CCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCAGCTTCTCTTTCGCTGCAGCCGGTaGTTCAGGGAGGGGACTATG +
Preference number: 4 (lower is better)
Translates to: PKKGHLAEPYSSQGPQLLFRCSR*FREGTM
Trigger: CATAGTCCCCTCCCTGAAGCACCGGCTGCAGCGAAA...GAGAAGCTGAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp CCCAGCAGGGGGTTCCTGGGCCCGCCCAAGCACTGGGCTAAAACGTGGAAACTGCCAAGGGGCAGAGGTTaGGGATGTCTCAGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: PSRGFLGPPKHWAKTWKLPRGRG*GCLSKE
Trigger: CTCTTTACTGAGACATCCCCAACCTCTGCCCCTTGG...CAGTTTCCACGTTTTAGCCCAGTGCTTGGGCGGGCCCAGGAACCCCCTGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp GTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCAAAAGGATCAGAGTCTaGGCCCAAAGAAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: VWAQRRATWQSHTAAKALKRIRV*AQRRAT
Trigger: GGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTT...GAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp TGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCAGTAAAGAGGCTCTCCCAATACAGTaGACAGCAGTCGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: WPWERVPRGRGWGCLSKEALPIQ*TAVGCH
Trigger: ATGGCAGCCGACTGCTGTTCACTGTATTGGGAGAGC...CTCTTTACTGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp AACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCGTGGAAACTGGGCATTaGCAAAGTACAGCGGGATGT +
Preference number: 4 (lower is better)
Translates to: NRWWPWERVPRGRGWGCLVETGH*QSTAGC
Trigger: ACATCCCGCTGTACTTTGTCAATGCCCAGTTTCCAC...GAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp GGGAAAGAAAAGGATCAGAGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCAGGGAACAGGGACCCATaGAGGGAAGAGGCCCATCGA +
Preference number: 4 (lower is better)
Translates to: GKEKDQSLGPKKGHLAEPGNRDP*REEAHR
Trigger: TCGATGGGCCTCTTCCCTCCATGGGTCCCTGTTCCC...TGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTTCTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp TTTGTTTGTGCAGGAAGGCTGGTGAGAAGTCCAGACCTAAGGGCCCACATGGCACTGGGGCTGGGCTCCTaGCTCCCCCTGGATAATGCC +
Preference number: 4 (lower is better)
Translates to: FVCAGRLVRSPDLRAHMALGLGS*LPLDNA
Trigger: GGCATTATCCAGGGGGAGCCAGGAGCCCAGCCCCAG...TGCCATGTGGGCCCTTAGGTCTGGACTTCTCACCAGCCTTCCTGCACAAACAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR GCA 90 bp GGAAAGAAAAGGATCAGAGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATCAGGGCCCAGCCGGATaGCGTCTTCACCCACTCAAA +
Preference number: 4 (lower is better)
Translates to: GKKRIRVWAQRRATWQSHQGPAG*RLHPLK
Trigger: TTTGAGTGGGTGAAGACGGCATCCGGCTGGGCCCTG...ATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTTCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp CCCAGCAGGGGGTTCCTGGGCCCGCCCAAGCACTGGGCTAAAACGTGGAAACTGCCTCTCCTCACCATCTaGTGTCTGTATTGTTGTCTC +
Preference number: 4 (lower is better)
Translates to: PSRGFLGPPKHWAKTWKLPLLTI*CLYCCL
Trigger: GAGACAACAATACAGACACCAGATGGTGAGGAGAGG...CAGTTTCCACGTTTTAGCCCAGTGCTTGGGCGGGCCCAGGAACCCCCTGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp CCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCAGCTTCTCGCTCCTGGCTCCCCCTaGATAATGCCACTAGAAGAA +
Preference number: 4 (lower is better)
Translates to: PKKGHLAEPYSSQGPQLLAPGSP*IMPLEE
Trigger: TTCTTCTAGTGGCATTATCCAGGGGGAGCCAGGAGC...GAGAAGCTGAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp GTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCTCTCCAACCCACCGCTaGGCTAAGTATAAGAGATTC +
Preference number: 4 (lower is better)
Translates to: VWAQRRATWQSHTAAKALSPTHR*AKYKRF
Trigger: GAATCTCTTATACTTAGCCCAGCGGTGGGTTGGAGA...GAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp GAAAAGGTGAGCAGGCAACCGGAGGCAAGAAGGGAGCTGAATGTAGTGGGATGTGAAGCCCCAGCAGCCTaGCGCACTCACCACACTGAG +
Preference number: 4 (lower is better)
Translates to: EKVSRQPEARRELNVVGCEAPAA*RTHHTE
Trigger: CTCAGTGTGGTGAGTGCGCCAGGCTGCTGGGGCTTC...ACATCCCACTACATTCAGCTCCCTTCTTGCCTCCGGTTGCCTGCTCACCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp GAACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCATCACGCCAAATGTTaGTGCATCTCTTCCACACTT +
Preference number: 4 (lower is better)
Translates to: EQVVALGEGPKGQRLGMSHHAKC*CISSTL
Trigger: AAGTGTGGAAGAGATGCATCAACATTTGGCGTGATG...AGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp AAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCAGCTTCTCCATGCCACAATCGTTGCTaGCTTTGCACCTCCAACGCA +
Preference number: 4 (lower is better)
Translates to: KEGPPGRAIQQPRPSASPCHNRC*LCTSNA
Trigger: TGCGTTGGAGGTGCAAAGTCAGCAACGATTGTGGCA...TGGAGAAGCTGAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR GCA 90 bp GTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCAAATCTTTAATTCCGTaGCATCTCCAACCCACCGCT +
Preference number: 4 (lower is better)
Translates to: VWAQRRATWQSHTAAKALKSLIP*HLQPTA
Trigger: AGCGGTGGGTTGGAGATGGCACGGAATTAAAGATTT...GAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp GGAAAGAAAAGGATCAGAGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATGCAGTTCTTGTGCCATaGTCCAGCCTTCCAGGGGTC +
Preference number: 4 (lower is better)
Translates to: GKKRIRVWAQRRATWQSHAVLVP*SSLPGV
Trigger: GACCCCTGGAAGGCTGGACCATGGCACAAGAACTGC...ATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTTCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp TGTCTCAGTAAAGAGGGGCAGGTCATGAATAGAGCCTCCACCCCCAGCAGGGGGTCACAAGTCCACATCTaGGCCTCCCAGACTCGAAAG +
Preference number: 4 (lower is better)
Translates to: CLSKEGQVMNRASTPSRGSQVHI*ASQTRK
Trigger: CTTTCGAGTCTGGGAGGCCCAGATGTGGACTTGTGA...CCCCCTGCTGGGGGTGGAGGCTCTATTCATGACCTGCCCCTCTTTACTGAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp GAACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTACCATCCTGTACCCTTaGCTTTCCTTTCATAAGCAC +
Preference number: 4 (lower is better)
Translates to: EQVVALGEGPKGQRLGMSTILYP*LSFHKH
Trigger: GTGCTTATGAAAGGAAAGCCAAGGGTACAGGATGGT...AGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp CCCAGCAGGGGGTTCCTGGGCCCGCCCAAGCACTGGGCTAAAACGTGGAAACTGGAATGTAGTGGGATGTaGGTTTGTTTGTGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PSRGFLGPPKHWAKTWKLECSGM*VCLCRK
Trigger: CTTCCTGCACAAACAAACCCACATCCCACTACATTC...CAGTTTCCACGTTTTAGCCCAGTGCTTGGGCGGGCCCAGGAACCCCCTGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp TTTGTTTGTGCAGGAAGGCTGGTGAGAAGTCCAGACCTAAGGGCCCACATGGCAGGGCAATTCGGCCTGTaGACCAGCCCTGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: FVCAGRLVRSPDLRAHMAGQFGL*TSPAEK
Trigger: CTTCTCTGCAGGGCTGGTCCACAGGCCGAATTGCCC...TGCCATGTGGGCCCTTAGGTCTGGACTTCTCACCAGCCTTCCTGCACAAACAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp GGGAAAGAAAAGGATCAGAGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCACACACTTGCTCCCGGTaGTGGATGAAGGCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: GKEKDQSLGPKKGHLAEPHTCSR*WMKAVL
Trigger: AAGAACTGCCTTCATCCATCACCGGGAGCAAGTGTG...TGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTTCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp GAACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTAAAAAGGAGGATGACTaGTTTACCATCCTGTACCCT +
Preference number: 4 (lower is better)
Translates to: EQVVALGEGPKGQRLGMSKKEDD*FTILYP
Trigger: AGGGTACAGGATGGTAAACCAGTCATCCTCCTTTTT...AGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp GGAAAGAAAAGGATCAGAGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATATAAGAATGCAGCTCTaGCAGGCCACAGCCAAGACA +
Preference number: 4 (lower is better)
Translates to: GKKRIRVWAQRRATWQSHIRMQL*QATAKT
Trigger: TGTCTTGGCTGTGGCCTGCCAGAGCTGCATTCTTAT...ATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp TGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCAGTAAAGAGCTAAAACGTGGAAACTaGGCATTGACAAAGTACAGC +
Preference number: 4 (lower is better)
Translates to: WPWERVPRGRGWGCLSKELKRGN*ALTKYS
Trigger: GCTGTACTTTGTCAATGCCCAGTTTCCACGTTTTAG...CTCTTTACTGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp GAAAAGGTGAGCAGGCAACCGGAGGCAAGAAGGGAGCTGAATGTAGTGGGATGTCATGTTGTATCCTTCTaGTCCTCCCCAGATACTGTC +
Preference number: 4 (lower is better)
Translates to: EKVSRQPEARRELNVVGCHVVSF*SSPDTV
Trigger: GACAGTATCTGGGGAGGATCAGAAGGATACAACATG...ACATCCCACTACATTCAGCTCCCTTCTTGCCTCCGGTTGCCTGCTCACCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp GGAAAGAAAAGGATCAGAGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATCACTGGGCTAAAACGTaGAAACTGGGCATTGACAAA +
Preference number: 4 (lower is better)
Translates to: GKKRIRVWAQRRATWQSHHWAKT*KLGIDK
Trigger: TTTGTCAATGCCCAGTTTCCACGTTTTAGCCCAGTG...ATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp GAAAAGGTGAGCAGGCAACCGGAGGCAAGAAGGGAGCTGAATGTAGTGGGATGTTGCGAAAAAGGAGGATaGCTGGTTTACCATCCTGTA +
Preference number: 4 (lower is better)
Translates to: EKVSRQPEARRELNVVGCCEKGG*LVYHPV
Trigger: TACAGGATGGTAAACCAGTCATCCTCCTTTTTCGCA...ACATCCCACTACATTCAGCTCCCTTCTTGCCTCCGGTTGCCTGCTCACCTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp TTTGTTTGTGCAGGAAGGCTGGTGAGAAGTCCAGACCTAAGGGCCCACATGGCAGTAGGACAGGAAGATTaGTCCACTATAGCACAAAAG +
Preference number: 4 (lower is better)
Translates to: FVCAGRLVRSPDLRAHMAVGQED*STIAQK
Trigger: CTTTTGTGCTATAGTGGATCAATCTTCCTGTCCTAC...TGCCATGTGGGCCCTTAGGTCTGGACTTCTCACCAGCCTTCCTGCACAAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp TTTGTTTGTGCAGGAAGGCTGGTGAGAAGTCCAGACCTAAGGGCCCACATGGCACTCACCACAACGTTCTaGAAAAGACAGGGAGTAAAT +
Preference number: 4 (lower is better)
Translates to: FVCAGRLVRSPDLRAHMALTTTF*KRQGVN
Trigger: ATTTACTCCCTGTCTTTTCCAGAACGTTGTGGTGAG...TGCCATGTGGGCCCTTAGGTCTGGACTTCTCACCAGCCTTCCTGCACAAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CCA 90 bp GAAAAGGTGAGCAGGCAACCGGAGGCAAGAAGGGAGCTGAATGTAGTGGGATGTGTGCAATTTGTGACTTaGGCAAATTCAGCGATCAGA +
Preference number: 4 (lower is better)
Translates to: EKVSRQPEARRELNVVGCVQFVT*ANSAIR
Trigger: TCTGATCGCTGAATTTGCCCAAGTCACAAATTGCAC...ACATCCCACTACATTCAGCTCCCTTCTTGCCTCCGGTTGCCTGCTCACCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR TCA 90 bp GAAAAGGTGAGCAGGCAACCGGAGGCAAGAAGGGAGCTGAATGTAGTGGGATGTTTTTTAGAAAACACCTaGCTCAGCCTCTTTCTTACA +
Preference number: 4 (lower is better)
Translates to: EKVSRQPEARRELNVVGCFLENT*LSLFLT
Trigger: TGTAAGAAAGAGGCTGAGTCAGGTGTTTTCTAAAAA...ACATCCCACTACATTCAGCTCCCTTCTTGCCTCCGGTTGCCTGCTCACCTTTTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CAA 90 bp ACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCAGGGGACCAGAGCAGGTaGGTCACCCCACCTCCTCGG +
Preference number: 5 (lower is better)
Translates to: TGGGPGRGSQGAEVGDVSGDQSR*VTPPPR
Trigger: CCGAGGAGGTGGGGTGACCAACCTGCTCTGGTCCCC...TGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS CCA 90 bp AGCACATCTTGCCGGTTCGCAGGACGTCTGCAGTCGGCAAACTCCTaGCCGGAACGGCACAGACCGCACTCCCGCAACTCGGTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: STSCRFAGRLQSANS*PERHRPHSRNSVPG
Trigger: CCCGGGAACCGAGTTGCGGGAGTGCGGTCTGTGCCGTTCCGGCCAGGAGTTTGCCGACTGCAGACGTCCTGCGAACCGGCAAGATGTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000548880.2
CDS GCA 90 bp GACCCCGAGGCGGTGGAGGAGGGAACAACCCCAGAGAGCACATCTTaGCGGTTCGCAGGACGTCTGCAGTCGGCAAACTCCTGGCCGGAA +
Preference number: 5 (lower is better)
Translates to: DPEAVEEGTTPESTS*RFAGRLQSANSWPE
Trigger: TTCCGGCCAGGAGTTTGCCGACTGCAGACGTCCTGCGAACCGGCAAGATGTGCTCTCTGGGGTTGTTCCCTCCTCCACCGCCTCGGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000548880.2
CDS GCA 90 bp GCACAGACCGCACTCCCGCAACTCGGTTCCCGGGCTAGATTCGTATaGGGACGGGTACCGCAAGGGACAAACGGCGAGGCGGAACTCAAC +
Preference number: 5 (lower is better)
Translates to: AQTALPQLGSRARFV*GRVPQGTNGEAELN
Trigger: GTTGAGTTCCGCCTCGCCGTTTGTCCCTTGCGGTACCCGTCCGCATACGAATCTAGCCCGGGAACCGAGTTGCGGGAGTGCGGTCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000209873.9
ENST00000546562.6
ENST00000548880.2
ENST00000549983.5
CDS GCA 90 bp AGGGAACAACCCCAGAGAGCACATCTTGCCGGTTCGCAGGACGTCTaGAGTCGGCAAACTCCTGGCCGGAACGGCACAGACCGCACTCCC +
Preference number: 5 (lower is better)
Translates to: REQPQRAHLAGSQDV*SRQTPGRNGTDRTP
Trigger: GGGAGTGCGGTCTGTGCCGTTCCGGCCAGGAGTTTGCCGACTGCAGACGTCCTGCGAACCGGCAAGATGTGCTCTCTGGGGTTGTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000548880.2
CDS CCA 90 bp AAGATTGATCCACGGTTCGCAGGACGTCTGCAGTCGGCAAACTCCTaGCCGGAACGGCACAGACCGCACTCCCGCAACTCGGTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: KIDPRFAGRLQSANS*PERHRPHSRNSVPG
Trigger: CCCGGGAACCGAGTTGCGGGAGTGCGGTCTGTGCCGTTCCGGCCAGGAGTTTGCCGACTGCAGACGTCCTGCGAACCGTGGATCAATCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546562.6
ENST00000549983.5
CDS-3UTR CAA 90 bp GTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCGTGGTAGCCAGGATTTaGCTGCCGTCTGGGGACCAG +
Preference number: 5 (lower is better)
Translates to: VWAQRRATWQSHTAAKALVVARI*LPSGDQ
Trigger: CTGGTCCCCAGACGGCAGCAAAATCCTGGCTACCAC...GAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CAA 90 bp AGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTAGGGTGAGACAGCACTaGGGCACAGCCAGAAGAGGG +
Preference number: 5 (lower is better)
Translates to: SLGPKKGHLAEPYSSQGPRVRQH*GTARRG
Trigger: CCCTCTTCTGGCTGTGCCCAAGTGCTGTCTCACCCT...AGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CAA 90 bp AACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCGGACACAGGTCTCTGTaGAGACATCCCATACCCGGA +
Preference number: 5 (lower is better)
Translates to: NRWWPWERVPRGRGWGCLGHRSL*RHPIPG
Trigger: TCCGGGTATGGGATGTCTCAACAGAGACCTGTGTCC...GAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS GCA 90 bp CTAAGGGGCTTCCAGGCCAGAGACGCCACATTTCGCTGCAGCCGGTaGTTCAGGGAGGGGACTATGGTGCTGCTGGCATTATACACACGG +
Preference number: 5 (lower is better)
Translates to: LRGFQARDATFRCSR*FREGTMVLLALYTR
Trigger: CCGTGTGTATAATGCCAGCAGCACCATAGTCCCCTCCCTGAAGCACCGGCTGCAGCGAAATGTGGCGTCTCTGGCCTGGAAGCCCCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000209873.9
ENST00000547238.6
ENST00000547520.6
ENST00000547761.6
ENST00000548880.2
ENST00000548931.6
ENST00000549450.6
ENST00000549983.5
ENST00000550286.5
ENST00000552161.6
ENST00000672797.1
CDS GCA 90 bp ACAGAGGCACTAAGGGGCTTCCAGGCCAGAGACGCCACATTTCGCTaGAGCCGGTGCTTCAGGGAGGGGACTATGGTGCTGCTGGCATTA +
Preference number: 5 (lower is better)
Translates to: TEALRGFQARDATFR*SRCFREGTMVLLAL
Trigger: TAATGCCAGCAGCACCATAGTCCCCTCCCTGAAGCACCGGCTGCAGCGAAATGTGGCGTCTCTGGCCTGGAAGCCCCTTAGTGCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000209873.9
ENST00000547238.6
ENST00000547520.6
ENST00000547761.6
ENST00000548880.2
ENST00000548931.6
ENST00000549450.6
ENST00000549983.5
ENST00000550286.5
ENST00000552161.6
ENST00000672797.1
CDS-3UTR CAA 90 bp GAACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTGCATCTCTTCCACACTaGCTCCCGGTGATGGATGAA +
Preference number: 5 (lower is better)
Translates to: EQVVALGEGPKGQRLGMSASLPH*LPVMDE
Trigger: TTCATCCATCACCGGGAGCAAGTGTGGAAGAGATGC...AGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS TCA 90 bp GTCCTTGCCCTCCCTCCATCCTTGTCCCACTCACCGAAAGACAGCTaGAGGAGTGGTAGCCAGGATTTTGCTGCCGTCTGGGGACCAGAG +
Preference number: 5 (lower is better)
Translates to: VLALPPSLSHSPKDS*RSGSQDFAAVWGPE
Trigger: CTCTGGTCCCCAGACGGCAGCAAAATCCTGGCTACCACTCCTTCAGCTGTCTTTCGGTGAGTGGGACAAGGATGGAGGGAGGGCAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546572.1
CDS CCA 90 bp AATCAGTGGCTCTCCCAATACAGTGAACAGCAGTCGGCTGCCATCTaGGCTCCAGCAGCCAGTCTGGGGTCAGGGAGCAAAAGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: NQWLSQYSEQQSAAI*APAASLGSGSKRQE
Trigger: CTCCTGCCTTTTGCTCCCTGACCCCAGACTGGCTGCTGGAGCCCAGATGGCAGCCGACTGCTGTTCACTGTATTGGGAGAGCCACTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672797.1
ENST00000672900.1
CDS-3UTR CAA 90 bp AGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTAGCAGGGCCCCTTTGTaGAAGGAAGGATGGAAAGTG +
Preference number: 5 (lower is better)
Translates to: SLGPKKGHLAEPYSSQGPSRAPL*KEGWKV
Trigger: CACTTTCCATCCTTCCTTCAACAAAGGGGCCCTGCT...AGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CAA 90 bp TGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCAGTAAAGAGGGGATGTGGGTTTGTTaGTGCAGGAAGGCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: WPWERVPRGRGWGCLSKEGMWVC*CRKAGE
Trigger: CTCACCAGCCTTCCTGCACAAACAAACCCACATCCC...CTCTTTACTGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS TCA 90 bp CTACTGCCCGTCACCAGCTCGTTATTGTGCTCATATAGGGTGACTTaGCCCCGAGGCGGTGGAGGAGGGAACAACCCCAGAGAGCACATC +
Preference number: 5 (lower is better)
Translates to: LLPVTSSLLCSYRVT*PRGGGGGNNPREHI
Trigger: GATGTGCTCTCTGGGGTTGTTCCCTCCTCCACCGCCTCGGGGTCAAGTCACCCTATATGAGCACAATAACGAGCTGGTGACGGGCAGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000548880.2
CDS TCA 90 bp CATAGCTACTGCCCGTCACCAGCTCGTTATTGTGCTCATATAGGGTaGCTTGACCCCGAGGCGGTGGAGGAGGGAACAACCCCAGAGAGC +
Preference number: 5 (lower is better)
Translates to: HSYCPSPARYCAHIG*LDPEAVEEGTTPES
Trigger: GCTCTCTGGGGTTGTTCCCTCCTCCACCGCCTCGGGGTCAAGTCACCCTATATGAGCACAATAACGAGCTGGTGACGGGCAGTAGCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000548880.2
CDS GCA 90 bp ACAGAGGCACTAAGGGGCTTCCAGGCCAGAGACGCCACATTTCGCTaGAGCCGGTGCTTCAGGGAGGGGACTATGGTGCAATTTGTGACT +
Preference number: 5 (lower is better)
Translates to: TEALRGFQARDATFR*SRCFREGTMVQFVT
Trigger: AGTCACAAATTGCACCATAGTCCCCTCCCTGAAGCACCGGCTGCAGCGAAATGTGGCGTCTCTGGCCTGGAAGCCCCTTAGTGCCTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394384.7
ENST00000547757.2
ENST00000552876.5
CDS GCA 90 bp AGACAAGGAAGGACAGGCACTCCCCAGGTCCTTCTGCCCAGTAAGTaGTCTCAACACCACACTCTGGACACCCACTCTGGACACCCACTC +
Preference number: 5 (lower is better)
Translates to: RQGRTGTPQVLLPSK*SQHHTLDTHSGHPL
Trigger: GAGTGGGTGTCCAGAGTGGGTGTCCAGAGTGTGGTGTTGAGAGCACTTACTGGGCAGAAGGACCTGGGGAGTGCCTGTCCTTCCTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546562.6
ENST00000548880.2
ENST00000552161.6
ENST00000672900.1
CDS CCA 90 bp GAGAGAAGGAACAGTGCTGTTCCGCCCGCTGCCCCCGCCCTGGCCTaGCACAAGTACTGTCCCCTCCTCCATACTGCTTATTTAACGTTT +
Preference number: 5 (lower is better)
Translates to: ERRNSAVPPAAPALA*HKYCPLLHTAYLTF
Trigger: AAACGTTAAATAAGCAGTATGGAGGAGGGGACAGTACTTGTGCCAGGCCAGGGCGGGGGCAGCGGGCGGAACAGCACTGTTCCTTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551724.5
CDS-3UTR CAA 90 bp AGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTGATCTGCCACAATCGTaGCTGACTTTGCACCTCCAA +
Preference number: 5 (lower is better)
Translates to: SLGPKKGHLAEPYSSQGPDLPQS*LTLHLQ
Trigger: TTGGAGGTGCAAAGTCAGCAACGATTGTGGCAGATC...AGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CAA 90 bp TGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCAGTAAAGAGCGTGGAAACTGGGCATaGACAAAGTACAGCGGGATG +
Preference number: 5 (lower is better)
Translates to: WPWERVPRGRGWGCLSKERGNWA*TKYSGM
Trigger: CATCCCGCTGTACTTTGTCAATGCCCAGTTTCCACG...CTCTTTACTGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CAA 90 bp CCCAGCAGGGGGTTCCTGGGCCCGCCCAAGCACTGGGCTAAAACGTGGAAACTGGGTGCAATTTGTGACTaGGGCAAATTCAGCGATCAG +
Preference number: 5 (lower is better)
Translates to: PSRGFLGPPKHWAKTWKLGAICD*GKFSDQ
Trigger: CTGATCGCTGAATTTGCCCAAGTCACAAATTGCACC...CAGTTTCCACGTTTTAGCCCAGTGCTTGGGCGGGCCCAGGAACCCCCTGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS GCA 90 bp CTAAGGGGCTTCCAGGCCAGAGACGCCACATTTCGCTGCAGCCGGTaGTTCAGGGAGGGGACTATGGTGCAATTTGTGACTTGGGCAAAT +
Preference number: 5 (lower is better)
Translates to: LRGFQARDATFRCSR*FREGTMVQFVTWAN
Trigger: ATTTGCCCAAGTCACAAATTGCACCATAGTCCCCTCCCTGAAGCACCGGCTGCAGCGAAATGTGGCGTCTCTGGCCTGGAAGCCCCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394384.7
ENST00000547757.2
ENST00000552876.5
CDS CCA 90 bp ACACGGACTGAGTCATCTAGCAGGGCCACTGCAAACTTGTTGGTGTaGGGGTGCCATGCAAAGACACGCAAGCAGCAGCTGGACCTAAGG +
Preference number: 5 (lower is better)
Translates to: TRTESSSRATANLLV*GCHAKTRKQQLDLR
Trigger: CCTTAGGTCCAGCTGCTGCTTGCGTGTCTTTGCATGGCACCCCCACACCAACAAGTTTGCAGTGGCCCTGCTAGATGACTCAGTCCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS CCA 90 bp TATAATGATCGGTTAGGTGCCTGCTTCTTACCCTGTAAGGTGAACTaGAGAGAAGGAACAGTGCTGTTCCGCCCGCTGCCCCCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: YNDRLGACFLPCKVN*REGTVLFRPLPPPW
Trigger: CCAGGGCGGGGGCAGCGGGCGGAACAGCACTGTTCCTTCTCTCCAGTTCACCTTACAGGGTAAGAAGCAGGCACCTAACCGATCATTATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550286.5
CDS-3UTR CAA 90 bp GTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATACAGCAGCCAAGGCCCTCTCTTTAGGGGATCCTTaGTCAGTTGTAGGACAGGAA +
Preference number: 5 (lower is better)
Translates to: VWAQRRATWQSHTAAKALSLGDP*SVVGQE
Trigger: TTCCTGTCCTACAACTGACAAAGGATCCCCTAAAGA...GAGGGCCTTGGCTGCTGTATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS CCA 90 bp TATACACACGGACTGAGTCATCTAGCAGGGCCACTGCAAACTTGTTaGTGTGGGGGTGCCATGCAAAGACACGCAAGCAGCAGCTGGACC +
Preference number: 5 (lower is better)
Translates to: YTHGLSHLAGPLQTC*CGGAMQRHASSSWT
Trigger: GGTCCAGCTGCTGCTTGCGTGTCTTTGCATGGCACCCCCACACCAACAAGTTTGCAGTGGCCCTGCTAGATGACTCAGTCCGTGTGTATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000209873.9
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547761.6
ENST00000548880.2
ENST00000549450.6
ENST00000549821.5
ENST00000549983.5
ENST00000550286.5
ENST00000552161.6
ENST00000672797.1
ENST00000672900.1
CDS CCA 90 bp TATGCCCAGGGTGAGACAGCACTTGGGCACAGCCAGAAGAGGGTCTaGAGGGGAACACAGAGGATGTGGAGTCAGAAGATGACAAGAAGC +
Preference number: 5 (lower is better)
Translates to: YAQGETALGHSQKRV*RGTQRMWSQKMTRS
Trigger: GCTTCTTGTCATCTTCTGACTCCACATCCTCTGTGTTCCCCTCCAGACCCTCTTCTGGCTGTGCCCAAGTGCTGTCTCACCCTGGGCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546572.1
CDS-3UTR CAA 90 bp GGAAAGAAAAGGATCAGAGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATCAATCGTTGCTGACTTaGCACCTCCAACGCACCCCT +
Preference number: 5 (lower is better)
Translates to: GKKRIRVWAQRRATWQSHQSLLT*HLQRTP
Trigger: AGGGGTGCGTTGGAGGTGCAAAGTCAGCAACGATTG...ATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTTCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS TCA 90 bp CCAGGGCACGGCCTCATTAGATTAACTGGGAAGATGGCTGTGGGCTaGGCCCTTCATCCTTGCCTCTCACCTTTCATAAGCACAGCCAGA +
Preference number: 5 (lower is better)
Translates to: PGHGLIRLTGKMAVG*ALHPCLSPFISTAR
Trigger: TCTGGCTGTGCTTATGAAAGGTGAGAGGCAAGGATGAAGGGCTCAGCCCACAGCCATCTTCCCAGTTAATCTAATGAGGCCGTGCCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672900.1
CDS GCA 90 bp CTGGACCACTCCTACCCTCTGAAGTCATCACACCCAACCCTGACCTaGAAGGATAGGAATGAGGGCAGAGTAGGATGGGGACACAGCAAA +
Preference number: 5 (lower is better)
Translates to: LDHSYPLKSSHPTLT*KDRNEGRVGWGHSK
Trigger: TTTGCTGTGTCCCCATCCTACTCTGCCCTCATTCCTATCCTTGCAGGTCAGGGTTGGGTGTGATGACTTCAGAGGGTAGGAGTGGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000552161.6
ENST00000672900.1
CDS GCA 90 bp GTGATATTGACAAGTCAGAGCCCACCTGGTGTCCCCACACACACCTaGTGGCATTATACACACGGACTGAGTCATCTAGCAGGGCCACTG +
Preference number: 5 (lower is better)
Translates to: VILTSQSPPGVPTHT*WHYTHGLSHLAGPL
Trigger: CAGTGGCCCTGCTAGATGACTCAGTCCGTGTGTATAATGCCAGCAGGTGTGTGTGGGGACACCAGGTGGGCTCTGACTTGTCAATATCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS GCA 90 bp GGGGTCAGGGAGCAAAAGGCAGGAGAAGGTATGTCTATAGTAGAATaGAGGAGGGAAAGTAGAGGTGGCCAGGTTTGGGAGCATCAGGGG +
Preference number: 5 (lower is better)
Translates to: GVREQKAGEGMSIVE*RRESRGGQVWEHQG
Trigger: CCCCTGATGCTCCCAAACCTGGCCACCTCTACTTTCCCTCCTGCATTCTACTATAGACATACCTTCTCCTGCCTTTTGCTCCCTGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672900.1
CDS CCA 90 bp ACACGGACTGAGTCATCTAGCAGGGCCACTGCAAACTTGTTGGTGTaGGGGTGCCATGCAAAGACACGCAAGCAGCAGCTGGACCAATTT +
Preference number: 5 (lower is better)
Translates to: TRTESSSRATANLLV*GCHAKTRKQQLDQF
Trigger: AAATTGGTCCAGCTGCTGCTTGCGTGTCTTTGCATGGCACCCCCACACCAACAAGTTTGCAGTGGCCCTGCTAGATGACTCAGTCCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000209873.9
ENST00000547238.6
ENST00000547520.6
ENST00000547761.6
ENST00000548880.2
ENST00000549450.6
ENST00000549821.5
ENST00000549983.5
ENST00000550286.5
ENST00000552161.6
ENST00000672797.1
CDS-3UTR CAA 90 bp ACAGGTGGTGGCCCTGGGAGAGGGTCCCAAGGGGCAGAGGTTGGGGATGTCTCATGTAGGACAGGAAGATaGATCCACTATAGCACAAAA +
Preference number: 5 (lower is better)
Translates to: TGGGPGRGSQGAEVGDVSCRTGR*IHYSTK
Trigger: TTTTGTGCTATAGTGGATCAATCTTCCTGTCCTACA...TGAGACATCCCCAACCTCTGCCCCTTGGGACCCTCTCCCAGGGCCACCACCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS TCA 90 bp ACATCACGCCAAATGTTGATGCATCTCTTCCACACTTGCTCCCGGTaGTGGATGAAGGCAGTTCTTGTGCCATGGTCCAGCCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: TSRQMLMHLFHTCSR*WMKAVLVPWSSLPG
Trigger: CCCTGGAAGGCTGGACCATGGCACAAGAACTGCCTTCATCCATCACCGGGAGCAAGTGTGGAAGAGATGCATCAACATTTGGCGTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547757.2
ENST00000547761.6
ENST00000548258.5
ENST00000548880.2
ENST00000549450.6
ENST00000549821.5
ENST00000549983.5
ENST00000550286.5
ENST00000551724.5
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
CDS TCA 90 bp GCAAAGACACGCAAGCAGCAGCTGGACCTAAGGAAGGGGTTAACATaGAGAGTTCCTGCACCTATCCCTACCCTAGCCCAGAAGCTCACA +
Preference number: 5 (lower is better)
Translates to: AKTRKQQLDLRKGLT*RVPAPIPTLAQKLT
Trigger: TGTGAGCTTCTGGGCTAGGGTAGGGATAGGTGCAGGAACTCTTCATGTTAACCCCTTCCTTAGGTCCAGCTGCTGCTTGCGTGTCTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS CCA 90 bp ATATTGACAAGTCAGAGCCCACCTGGTGTCCCCACACACACCTGCTaGCATTATACACACGGACTGAGTCATCTAGCAGGGCCACTGCAA +
Preference number: 5 (lower is better)
Translates to: ILTSQSPPGVPTHTC*HYTHGLSHLAGPLQ
Trigger: TTGCAGTGGCCCTGCTAGATGACTCAGTCCGTGTGTATAATGCCAGCAGGTGTGTGTGGGGACACCAGGTGGGCTCTGACTTGTCAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS CCA 90 bp CACCACACTCTGGACACCCACTCTGGACACCCACTCTGGGTTATTTaGGTAGGTAGAGGAGAGGACAGGAAAAATAGGGCTAAAAGAGGC +
Preference number: 5 (lower is better)
Translates to: HHTLDTHSGHPLWVI*VGRGEDRKNRAKRG
Trigger: GCCTCTTTTAGCCCTATTTTTCCTGTCCTCTCCTCTACCTACCCAAATAACCCAGAGTGGGTGTCCAGAGTGGGTGTCCAGAGTGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546562.6
ENST00000548880.2
ENST00000552161.6
ENST00000672900.1
CDS TCA 90 bp TGGTGTCTGTATTGTTGTCTCAGACAGATCTGCCACAATCGTTGCTaGCTTTGCACCTCCAACGCACCCCTTTCCCTCACCACAACGTTC +
Preference number: 5 (lower is better)
Translates to: WCLYCCLRQICHNRC*LCTSNAPLSLTTTF
Trigger: GAACGTTGTGGTGAGGGAAAGGGGTGCGTTGGAGGTGCAAAGTCAGCAACGATTGTGGCAGATCTGTCTGAGACAACAATACAGACACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547757.2
ENST00000548880.2
ENST00000548931.6
ENST00000549450.6
ENST00000550033.5
ENST00000550286.5
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
ENST00000672900.1
CDS GCA 90 bp CAAGCAGCAGCTGGACCTAAGGAAGGGGTTAACATGAAGAGTTCCTaGACCTATCCCTACCCTAGCCCAGAAGCTCACATTCATTTCCAG +
Preference number: 5 (lower is better)
Translates to: QAAAGPKEGVNMKSS*TYPYPSPEAHIHFQ
Trigger: CTGGAAATGAATGTGAGCTTCTGGGCTAGGGTAGGGATAGGTGCAGGAACTCTTCATGTTAACCCCTTCCTTAGGTCCAGCTGCTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS-3UTR CAA 90 bp GGAAAGAAAAGGATCAGAGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATACATCACGCCAAATGTaGATGCATCTCTTCCACACT +
Preference number: 5 (lower is better)
Translates to: GKKRIRVWAQRRATWQSHTSRQM*MHLFHT
Trigger: AGTGTGGAAGAGATGCATCAACATTTGGCGTGATGT...ATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CAA 90 bp GAAAAGGTGAGCAGGCAACCGGAGGCAAGAAGGGAGCTGAATGTAGTGGGATGTCTGGTGTCTGTATTGTaGTCTCAGACAGATCTGCCA +
Preference number: 5 (lower is better)
Translates to: EKVSRQPEARRELNVVGCLVSVL*SQTDLP
Trigger: TGGCAGATCTGTCTGAGACAACAATACAGACACCAG...ACATCCCACTACATTCAGCTCCCTTCTTGCCTCCGGTTGCCTGCTCACCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS-3UTR CAA 90 bp GGAAAGAAAAGGATCAGAGTCTGGGCCCAAAGAAGGGCCACCTGGCAGAGCCATCATCTGGTGTCTGTATaGTTGTCTCAGACAGATCTG +
Preference number: 5 (lower is better)
Translates to: GKKRIRVWAQRRATWQSHHLVSV*LSQTDL
Trigger: CAGATCTGTCTGAGACAACAATACAGACACCAGATG...ATGGCTCTGCCAGGTGGCCCTTCTTTGGGCCCAGACTCTGATCCTTTTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547757.2
CDS TCA 90 bp GCCGTCTTCACCCACTCAAACACTGTAGGGTTGAGGAAGCAGCTCTaGTTAAACCATTCACAGGCCTCTTACCAGGTACCTTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: AVFTHSNTVGLRKQL*LNHSQASYQVPSSS
Trigger: AGAAGAGGAAGGTACCTGGTAAGAGGCCTGTGAATGGTTTAATCAGAGCTGCTTCCTCAACCCTACAGTGTTTGAGTGGGTGAAGACGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547520.6
CDS TCA 90 bp AAGGTTAGGTCTAGAAGAAGCACGCATCCAGTTATGGAGCTTCCCTaGCCCCAGTTCTGGAAGGAGCCCCATGAATCAGGTTCAAGAACT +
Preference number: 5 (lower is better)
Translates to: KVRSRRSTHPVMELP*PQFWKEPHESGSRT
Trigger: AGTTCTTGAACCTGATTCATGGGGCTCCTTCCAGAACTGGGGTCAGGGAAGCTCCATAACTGGATGCGTGCTTCTTCTAGACCTAACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS CCA 90 bp TGTAGGACAGGAAGATTGATCCACAAATTAATCCTCCCAGGCCTGTaGATCACCCAGAGGAAAATACAGGCTATGTCACAGGCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: CRTGRLIHKLILPGL*ITQRKIQAMSQAAG
Trigger: GCCAGCTGCCTGTGACATAGCCTGTATTTTCCTCTGGGTGATCCACAGGCCTGGGAGGATTAATTTGTGGATCAATCTTCCTGTCCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547761.6
ENST00000549821.5
CDS TCA 90 bp CAGGGGTCTTTAGGGGATCCTTTGTCAGTTGTAGGACAGGAAGATTaGTCCACCTGTAAGGTGAACTGGAGAGAAGGAACAGTGCTGTTC +
Preference number: 5 (lower is better)
Translates to: QGSLGDPLSVVGQED*STCKVNWREGTVLF
Trigger: GAACAGCACTGTTCCTTCTCTCCAGTTCACCTTACAGGTGGATCAATCTTCCTGTCCTACAACTGACAAAGGATCCCCTAAAGACCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551724.5
CDS CCA 90 bp CTTTCCACAAAGCTCCAGGGCTTGTGCACTCACCAATTTGTGACTTaGGCAAATTCAGCGATCAGATCTTCGCTCCTGAGCTGTAAGAAC +
Preference number: 5 (lower is better)
Translates to: LSTKLQGLCTHQFVT*ANSAIRSSLLSCKN
Trigger: GTTCTTACAGCTCAGGAGCGAAGATCTGATCGCTGAATTTGCCCAAGTCACAAATTGGTGAGTGCACAAGCCCTGGAGCTTTGTGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS GCA 90 bp AGGAGTGTGACGGTGATTCAGTCTCTTCCCAAATCTTTAATTCCGTaGCATCTCCAACCCACCGCTGGGCTAAGTATAAGAGATTCCAGA +
Preference number: 5 (lower is better)
Translates to: RSVTVIQSLPKSLIP*HLQPTAGLSIRDSR
Trigger: TCTGGAATCTCTTATACTTAGCCCAGCGGTGGGTTGGAGATGGCACGGAATTAAAGATTTGGGAAGAGACTGAATCACCGTCACACTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547238.6
ENST00000547757.2
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
CDS CCA 90 bp GTCTCTTCCCAAATCTTTAATTCCGTGCCATCTCCAACCCACCGCTaGGCTAAGTATAAGAGATTCCAGAGGTCTGTTTCCCATTTCCAC +
Preference number: 5 (lower is better)
Translates to: VSSQIFNSVPSPTHR*AKYKRFQRSVSHFH
Trigger: GTGGAAATGGGAAACAGACCTCTGGAATCTCTTATACTTAGCCCAGCGGTGGGTTGGAGATGGCACGGAATTAAAGATTTGGGAAGAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547238.6
ENST00000547757.2
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
CDS GCA 90 bp AGTTTTGAGGTTCAGGACTTCCTTTCCACAAAGCTCCAGGGCTTGTaGACTCACCAATTTGTGACTTGGGCAAATTCAGCGATCAGATCT +
Preference number: 5 (lower is better)
Translates to: SFEVQDFLSTKLQGL*THQFVTWANSAIRS
Trigger: AGATCTGATCGCTGAATTTGCCCAAGTCACAAATTGGTGAGTGCACAAGCCCTGGAGCTTTGTGGAAAGGAAGTCCTGAACCTCAAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS GCA 90 bp AAACCTCGATTTTCACCATCAGGTTATAATGATCGGTTAGGTGCCTaGTTCTTACCCTGTAAGGTGAACTGGAGAGAAGGAACAGTGCTG +
Preference number: 5 (lower is better)
Translates to: KPRFSPSGYNDRLGA*FLPCKVNWREGTVL
Trigger: CAGCACTGTTCCTTCTCTCCAGTTCACCTTACAGGGTAAGAAGCAGGCACCTAACCGATCATTATAACCTGATGGTGAAAATCGAGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550286.5
CDS CCA 90 bp AGTTCAAGAATATGGAGAGGAGATAACCACAAAACTAGGGAAGGCTaGAGGGAAAAATACTTACCCTCTTCTTCTGAGTTTGCAATTTCA +
Preference number: 5 (lower is better)
Translates to: SSRIWRGDNHKTREG*REKYLPSSSEFAIS
Trigger: TGAAATTGCAAACTCAGAAGAAGAGGGTAAGTATTTTTCCCTCCAGCCTTCCCTAGTTTTGTGGTTATCTCCTCTCCATATTCTTGAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546562.6
ENST00000548880.2
ENST00000552161.6
ENST00000672900.1
CDS CCA 72 bp TGCCGGTTCGCAGGACGTCTGCAGTCGGCAAACTCCTaGCCGGAACGGCACAGACCGCACTCCCGCAACTCG +
Preference number: 6 (lower is better)
Translates to: CRFAGRLQSANS*PERHRPHSRNS
Trigger: CGAGTTGCGGGAGTGCGGTCTGTGCCGTTCCGGCCAGGAGTTTGCCGACTGCAGACGTCCTGCGAACCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000548880.2
CDS CCA 72 bp CCACGGTTCGCAGGACGTCTGCAGTCGGCAAACTCCTaGCCGGAACGGCACAGACCGCACTCCCGCAACTCG +
Preference number: 6 (lower is better)
Translates to: PRFAGRLQSANS*PERHRPHSRNS
Trigger: CGAGTTGCGGGAGTGCGGTCTGTGCCGTTCCGGCCAGGAGTTTGCCGACTGCAGACGTCCTGCGAACCGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546562.6
ENST00000549983.5
CDS GCA 72 bp GCACTCCCGCAACTCGGTTCCCGGGCTAGATTCGTATaGGGACGGGTACCGCAAGGGACAAACGGCGAGGCG +
Preference number: 6 (lower is better)
Translates to: ALPQLGSRARFV*GRVPQGTNGEA
Trigger: CGCCTCGCCGTTTGTCCCTTGCGGTACCCGTCCGCATACGAATCTAGCCCGGGAACCGAGTTGCGGGAGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546562.6
ENST00000548880.2
ENST00000549983.5
CDS CCA 72 bp GAAGGAACAGTGCTGTTCCGCCCGCTGCCCCCGCCCTaGCCTGGCACAAGTACTGTCCCCTCCTCCATACTG +
Preference number: 6 (lower is better)
Translates to: EGTVLFRPLPPP*PGTSTVPSSIL
Trigger: CAGTATGGAGGAGGGGACAGTACTTGTGCCAGGCCAGGGCGGGGGCAGCGGGCGGAACAGCACTGTTCCTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551724.5
CDS GCA 72 bp CCCCAGAGAGCACATCTTGCCGGTTCGCAGGACGTCTaGAGTCGGCAAACTCCTGGCCGGAACGGCACAGAC +
Preference number: 6 (lower is better)
Translates to: PQRAHLAGSQDV*SRQTPGRNGTD
Trigger: GTCTGTGCCGTTCCGGCCAGGAGTTTGCCGACTGCAGACGTCCTGCGAACCGGCAAGATGTGCTCTCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000548880.2
CDS GCA 72 bp GCGGTGGAGGAGGGAACAACCCCAGAGAGCACATCTTaGCGGTTCGCAGGACGTCTGCAGTCGGCAAACTCC +
Preference number: 6 (lower is better)
Translates to: AVEEGTTPESTS*RFAGRLQSANS
Trigger: GGAGTTTGCCGACTGCAGACGTCCTGCGAACCGGCAAGATGTGCTCTCTGGGGTTGTTCCCTCCTCCACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000548880.2
CDS GCA 72 bp CTAAGGGGCTTCCAGGCCAGAGACGCCACATTTCGCTaGAGCCGGTGCTTCAGGGAGGGGACTATGGTGCTG +
Preference number: 6 (lower is better)
Translates to: LRGFQARDATFR*SRCFREGTMVL
Trigger: CAGCACCATAGTCCCCTCCCTGAAGCACCGGCTGCAGCGAAATGTGGCGTCTCTGGCCTGGAAGCCCCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000209873.9
ENST00000547238.6
ENST00000547520.6
ENST00000547761.6
ENST00000548880.2
ENST00000548931.6
ENST00000549450.6
ENST00000549983.5
ENST00000550286.5
ENST00000552161.6
ENST00000672797.1
CDS CAA 72 bp GGCGGTGGAGGAGGGAACAACCCCAGAGAGCACATCTaGCCGGTTCGCAGGACGTCTGCAGTCGGCAAACTC +
Preference number: 6 (lower is better)
Translates to: GGGGGNNPREHI*PVRRTSAVGKL
Trigger: GAGTTTGCCGACTGCAGACGTCCTGCGAACCGGCAAGATGTGCTCTCTGGGGTTGTTCCCTCCTCCACCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000548880.2
CDS GCA 72 bp CTAAGGGGCTTCCAGGCCAGAGACGCCACATTTCGCTaGAGCCGGTGCTTCAGGGAGGGGACTATGGTGCAA +
Preference number: 6 (lower is better)
Translates to: LRGFQARDATFR*SRCFREGTMVQ
Trigger: TTGCACCATAGTCCCCTCCCTGAAGCACCGGCTGCAGCGAAATGTGGCGTCTCTGGCCTGGAAGCCCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394384.7
ENST00000547757.2
ENST00000552876.5
CDS GCA 72 bp AGAGGCCCATCGACAGAGTGCCAGGGCCCAGCCGGATaGCGTCTTCACCCACTCAAACACTGTAGGGTTGAG +
Preference number: 6 (lower is better)
Translates to: RGPSTECQGPAG*RLHPLKHCRVE
Trigger: CTCAACCCTACAGTGTTTGAGTGGGTGAAGACGGCATCCGGCTGGGCCCTGGCACTCTGTCGATGGGCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000546562.6
ENST00000547520.6
ENST00000548880.2
ENST00000552161.6
ENST00000672900.1
CDS GCA 72 bp CTAAGGGGCTTCCAGGCCAGAGACGCCACATTTCGCTaGAGCCGGTGCTTCAGGGAGGGGACTATGGTGCTA +
Preference number: 6 (lower is better)
Translates to: LRGFQARDATFR*SRCFREGTMVL
Trigger: TAGCACCATAGTCCCCTCCCTGAAGCACCGGCTGCAGCGAAATGTGGCGTCTCTGGCCTGGAAGCCCCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS CAA 90 bp GCCTCCCAGACTCGAAAGACAGCTGAAGGAGTGGTAGCCAGGATTTaGCTGCCGTCTGGGGACCAGAGCAGGTTGGTCACCCCACCTCCT +
Preference number: 6 (lower is better)
Translates to: ASQTRKTAEGVVARI*LPSGDQSRLVTPPP
Trigger: AGGAGGTGGGGTGACCAACCTGCTCTGGTCCCCAGACGGCAGCAAAATCCTGGCTACCACTCCTTCAGCTGTCTTTCGAGTCTGGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547757.2
ENST00000548880.2
ENST00000548931.6
ENST00000549450.6
ENST00000550033.5
ENST00000550286.5
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
ENST00000672900.1
CDS TCA 72 bp TCCTCGGAACCAGGGAAGGGGGACACAGGTCTCTGTTaGGACATCCCATACCCGGATAGCAGCATCCACGGG +
Preference number: 6 (lower is better)
Translates to: SSEPGKGDTGLC*DIPYPDSSIHG
Trigger: CCCGTGGATGCTGCTATCCGGGTATGGGATGTCTCAACAGAGACCTGTGTCCCCCTTCCCTGGTTCCGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000546562.6
ENST00000546572.1
ENST00000547238.6
ENST00000547520.6
ENST00000547757.2
ENST00000547761.6
ENST00000548880.2
ENST00000548931.6
ENST00000549450.6
ENST00000550033.5
ENST00000550286.5
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
ENST00000672900.1
CDS GCA 72 bp TTCCAGGCCAGAGACGCCACATTTCGCTGCAGCCGGTaGTTCAGGGAGGGGACTATGGTGCTGCTGGCATTA +
Preference number: 6 (lower is better)
Translates to: FQARDATFRCSR*FREGTMVLLAL
Trigger: TAATGCCAGCAGCACCATAGTCCCCTCCCTGAAGCACCGGCTGCAGCGAAATGTGGCGTCTCTGGCCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000209873.9
ENST00000547238.6
ENST00000547520.6
ENST00000547761.6
ENST00000548880.2
ENST00000548931.6
ENST00000549450.6
ENST00000549983.5
ENST00000550286.5
ENST00000552161.6
ENST00000672797.1
CDS GCA 72 bp AGGACAGGAAGATTGATCCACGGTTCGCAGGACGTCTaGAGTCGGCAAACTCCTGGCCGGAACGGCACAGAC +
Preference number: 6 (lower is better)
Translates to: RTGRLIHGSQDV*SRQTPGRNGTD
Trigger: GTCTGTGCCGTTCCGGCCAGGAGTTTGCCGACTGCAGACGTCCTGCGAACCGTGGATCAATCTTCCTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000546562.6
ENST00000549983.5
CDS CCA 72 bp CAGAGGGCTGGGGAGGAAGCCAAACTTACAGACAGATaGGGGAACAGGGACCCATGGAGGGAAGAGGCCCAT +
Preference number: 6 (lower is better)
Translates to: QRAGEEAKLTDR*GNRDPWREEAH
Trigger: ATGGGCCTCTTCCCTCCATGGGTCCCTGTTCCCCCATCTGTCTGTAAGTTTGGCTTCCTCCCCAGCCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000552161.6
ENST00000672900.1
CDS CAA 72 bp GCTGGTAACAGGTGTATGCCCAGGGTGAGACAGCACTaGGGCACAGCCAGAAGAGGGTCTGGAGGGGAACAC +
Preference number: 6 (lower is better)
Translates to: AGNRCMPRVRQH*GTARRGSGGEH
Trigger: GTGTTCCCCTCCAGACCCTCTTCTGGCTGTGCCCAAGTGCTGTCTCACCCTGGGCATACACCTGTTACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546572.1
CDS CAA 90 bp TGTCCCACTCACCGAAAGACAGCTGAAGGAGTGGTAGCCAGGATTTaGCTGCCGTCTGGGGACCAGAGCAGGTTGGTCACCCCACCTCCT +
Preference number: 6 (lower is better)
Translates to: CPTHRKTAEGVVARI*LPSGDQSRLVTPPP
Trigger: AGGAGGTGGGGTGACCAACCTGCTCTGGTCCCCAGACGGCAGCAAAATCCTGGCTACCACTCCTTCAGCTGTCTTTCGGTGAGTGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546572.1
CDS CAA 90 bp AACTACAGGACTCCCCGGAACCAAGGCTGGCAAGGGAAGGTGATATaGACAAGTCAGAGCCCACCTGGTGTCCCCACACACACCTGCTGG +
Preference number: 6 (lower is better)
Translates to: NYRTPRNQGWQGKVI*TSQSPPGVPTHTCW
Trigger: CCAGCAGGTGTGTGTGGGGACACCAGGTGGGCTCTGACTTGTCAATATCACCTTCCCTTGCCAGCCTTGGTTCCGGGGAGTCCTGTAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS TCA 72 bp TGCCCGTCACCAGCTCGTTATTGTGCTCATATAGGGTaGCTTGACCCCGAGGCGGTGGAGGAGGGAACAACC +
Preference number: 6 (lower is better)
Translates to: CPSPARYCAHIG*LDPEAVEEGTT
Trigger: GGTTGTTCCCTCCTCCACCGCCTCGGGGTCAAGTCACCCTATATGAGCACAATAACGAGCTGGTGACGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000548880.2
CDS GCA 72 bp AGGACAGGCACTCCCCAGGTCCTTCTGCCCAGTAAGTaGTCTCAACACCACACTCTGGACACCCACTCTGGA +
Preference number: 6 (lower is better)
Translates to: RTGTPQVLLPSK*SQHHTLDTHSG
Trigger: TCCAGAGTGGGTGTCCAGAGTGTGGTGTTGAGAGCACTTACTGGGCAGAAGGACCTGGGGAGTGCCTGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000546562.6
ENST00000548880.2
ENST00000552161.6
ENST00000672900.1
CDS CCA 72 bp CGGTTAGGTGCCTGCTTCTTACCCTGTAAGGTGAACTaGAGAGAAGGAACAGTGCTGTTCCGCCCGCTGCCC +
Preference number: 6 (lower is better)
Translates to: RLGACFLPCKVN*REGTVLFRPLP
Trigger: GGGCAGCGGGCGGAACAGCACTGTTCCTTCTCTCCAGTTCACCTTACAGGGTAAGAAGCAGGCACCTAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550286.5
CDS CAA 72 bp GCTGGTAACAGGTGTATGCCCAGGGTGAGACAGCACTaGGGCACAGCCAGAAGAGGGTCGGGTAGACAAGGA +
Preference number: 6 (lower is better)
Translates to: AGNRCMPRVRQH*GTARRGSGRQG
Trigger: TCCTTGTCTACCCGACCCTCTTCTGGCTGTGCCCAAGTGCTGTCTCACCCTGGGCATACACCTGTTACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547757.2
ENST00000547761.6
ENST00000548880.2
ENST00000548931.6
ENST00000549450.6
ENST00000549983.5
ENST00000550286.5
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
ENST00000672900.1
CDS CAA 72 bp CACCGAAAGACAGCTGAAGGAGTGGTAGCCAGGATTTaGCTGCCGTCTGGGGACCAGAGCAGGTTGGTCACC +
Preference number: 6 (lower is better)
Translates to: HRKTAEGVVARI*LPSGDQSRLVT
Trigger: GGTGACCAACCTGCTCTGGTCCCCAGACGGCAGCAAAATCCTGGCTACCACTCCTTCAGCTGTCTTTCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546572.1
CDS CAA 72 bp ACTCCCCGGAACCAAGGCTGGCAAGGGAAGGTGATATaGACAAGTCAGAGCCCACCTGGTGTCCCCACACAC +
Preference number: 6 (lower is better)
Translates to: TPRNQGWQGKVI*TSQSPPGVPTH
Trigger: GTGTGTGGGGACACCAGGTGGGCTCTGACTTGTCAATATCACCTTCCCTTGCCAGCCTTGGTTCCGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS TCA 72 bp GTCACCAGCTCGTTATTGTGCTCATATAGGGTGACTTaGCCCCGAGGCGGTGGAGGAGGGAACAACCCCAGA +
Preference number: 6 (lower is better)
Translates to: VTSSLLCSYRVT*PRGGGGGNNPR
Trigger: TCTGGGGTTGTTCCCTCCTCCACCGCCTCGGGGTCAAGTCACCCTATATGAGCACAATAACGAGCTGGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000548880.2
CDS TCA 72 bp CTCCCTCCATCCTTGTCCCACTCACCGAAAGACAGCTaGAGGAGTGGTAGCCAGGATTTTGCTGCCGTCTGG +
Preference number: 6 (lower is better)
Translates to: LPPSLSHSPKDS*RSGSQDFAAVW
Trigger: CCAGACGGCAGCAAAATCCTGGCTACCACTCCTTCAGCTGTCTTTCGGTGAGTGGGACAAGGATGGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546572.1
CDS GCA 72 bp TTCCAGGCCAGAGACGCCACATTTCGCTGCAGCCGGTaGTTCAGGGAGGGGACTATGGTGCAATTTGTGACT +
Preference number: 6 (lower is better)
Translates to: FQARDATFRCSR*FREGTMVQFVT
Trigger: AGTCACAAATTGCACCATAGTCCCCTCCCTGAAGCACCGGCTGCAGCGAAATGTGGCGTCTCTGGCCTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394384.7
ENST00000547757.2
ENST00000552876.5
CDS GCA 72 bp TGTAGGACAGGAAGATTGATCCACCTTCTAGCCTCCTaGCGGGGCCAAGCTGTTTCCACTCCGCCAGACTCT +
Preference number: 6 (lower is better)
Translates to: CRTGRLIHLLAS*RGQAVSTPPDS
Trigger: AGAGTCTGGCGGAGTGGAAACAGCTTGGCCCCGGCAGGAGGCTAGAAGGTGGATCAATCTTCCTGTCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547520.6
ENST00000549450.6
CDS CCA 72 bp GAGTCATCTAGCAGGGCCACTGCAAACTTGTTGGTGTaGGGGTGCCATGCAAAGACACGCAAGCAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: ESSSRATANLLV*GCHAKTRKQQL
Trigger: CAGCTGCTGCTTGCGTGTCTTTGCATGGCACCCCCACACCAACAAGTTTGCAGTGGCCCTGCTAGATGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000209873.9
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547761.6
ENST00000548258.5
ENST00000548880.2
ENST00000549450.6
ENST00000549821.5
ENST00000549983.5
ENST00000550286.5
ENST00000552161.6
ENST00000672797.1
ENST00000672900.1
CDS CCA 72 bp GGTGAGACAGCACTTGGGCACAGCCAGAAGAGGGTCTaGAGGGGAACACAGAGGATGTGGAGTCAGAAGATG +
Preference number: 6 (lower is better)
Translates to: GETALGHSQKRV*RGTQRMWSQKM
Trigger: CATCTTCTGACTCCACATCCTCTGTGTTCCCCTCCAGACCCTCTTCTGGCTGTGCCCAAGTGCTGTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546572.1
CDS CAA 72 bp ACTCGAAAGACAGCTGAAGGAGTGGTAGCCAGGATTTaGCTGCCGTCTGGGGACCAGAGCAGGTTGGTCACC +
Preference number: 6 (lower is better)
Translates to: TRKTAEGVVARI*LPSGDQSRLVT
Trigger: GGTGACCAACCTGCTCTGGTCCCCAGACGGCAGCAAAATCCTGGCTACCACTCCTTCAGCTGTCTTTCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547757.2
ENST00000548880.2
ENST00000548931.6
ENST00000549450.6
ENST00000550033.5
ENST00000550286.5
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
ENST00000672900.1
CDS TCA 72 bp CGCAAGCAGCAGCTGGACCTAAGGAAGGGGTTAACATaGAGAGTTCCTGCACCTATCCCTACCCTAGCCCAG +
Preference number: 6 (lower is better)
Translates to: RKQQLDLRKGLT*RVPAPIPTLAQ
Trigger: CTGGGCTAGGGTAGGGATAGGTGCAGGAACTCTTCATGTTAACCCCTTCCTTAGGTCCAGCTGCTGCTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS TCA 72 bp CTCCCCAGTGTCTGTGAATCAGAGTCCCCTCTTACCTaGCAGCGCCCTGATAGAGTAGGCCACCTCTCACAA +
Preference number: 6 (lower is better)
Translates to: LPSVCESESPLT*QRPDRVGHLSQ
Trigger: TTGTGAGAGGTGGCCTACTCTATCAGGGCGCTGTCAGGTAAGAGGGGACTCTGATTCACAGACACTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000672900.1
CDS CAA 72 bp ACACGGACTGAGTCATCTAGCAGGGCCACTGCAAACTaGTTGGTGTGGGGGTGCCATGCAAAGACACGCAAG +
Preference number: 6 (lower is better)
Translates to: TRTESSSRATAN*LVWGCHAKTRK
Trigger: CTTGCGTGTCTTTGCATGGCACCCCCACACCAACAAGTTTGCAGTGGCCCTGCTAGATGACTCAGTCCGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000209873.9
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547761.6
ENST00000548880.2
ENST00000549450.6
ENST00000549821.5
ENST00000549983.5
ENST00000550286.5
ENST00000552161.6
ENST00000672797.1
ENST00000672900.1
CDS CAA 90 bp TTATACACACGGACTGAGTCATCTAGCAGGGCCACTGCAAACTTGTaGGTGTGGGGGTGCCATGCAAAGACACGCAAGCAGCAGCTGGAC +
Preference number: 6 (lower is better)
Translates to: LYTRTESSSRATANL*VWGCHAKTRKQQLD
Trigger: GTCCAGCTGCTGCTTGCGTGTCTTTGCATGGCACCCCCACACCAACAAGTTTGCAGTGGCCCTGCTAGATGACTCAGTCCGTGTGTATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000209873.9
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547761.6
ENST00000548880.2
ENST00000549450.6
ENST00000549821.5
ENST00000549983.5
ENST00000550286.5
ENST00000552161.6
ENST00000672797.1
ENST00000672900.1
CDS CAA 90 bp GCATTATACACACGGACTGAGTCATCTAGCAGGGCCACTGCAAACTaGTTGGTGTGGGGGTGCCATGCAAAGACACGCAAGCAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: ALYTRTESSSRATAN*LVWGCHAKTRKQQL
Trigger: CAGCTGCTGCTTGCGTGTCTTTGCATGGCACCCCCACACCAACAAGTTTGCAGTGGCCCTGCTAGATGACTCAGTCCGTGTGTATAATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000209873.9
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547761.6
ENST00000548880.2
ENST00000549450.6
ENST00000549821.5
ENST00000549983.5
ENST00000550286.5
ENST00000552161.6
ENST00000672797.1
ENST00000672900.1
CDS GCA 72 bp ACAAGTCAGAGCCCACCTGGTGTCCCCACACACACCTaGTGGCATTATACACACGGACTGAGTCATCTAGCA +
Preference number: 6 (lower is better)
Translates to: TSQSPPGVPTHT*WHYTHGLSHLA
Trigger: TGCTAGATGACTCAGTCCGTGTGTATAATGCCAGCAGGTGTGTGTGGGGACACCAGGTGGGCTCTGACTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS CCA 72 bp CACCACACTCTGGACACCCACTCTGGACACCCACTCTaGGTTATTTGGGTAGGTAGAGGAGAGGACAGGAAA +
Preference number: 6 (lower is better)
Translates to: HHTLDTHSGHPL*VIWVGRGEDRK
Trigger: TTTCCTGTCCTCTCCTCTACCTACCCAAATAACCCAGAGTGGGTGTCCAGAGTGGGTGTCCAGAGTGTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000546562.6
ENST00000548880.2
ENST00000552161.6
ENST00000672900.1
CDS TCA 72 bp ACCTCTCACAAGTCCACATCTGGGCCTCCCAGACTCTaGGCCAGAGAAAAGCAAATTACAGCTCAGGACCTC +
Preference number: 6 (lower is better)
Translates to: TSHKSTSGPPRL*AREKQITAQDL
Trigger: GAGGTCCTGAGCTGTAATTTGCTTTTCTCTGGCTCAGAGTCTGGGAGGCCCAGATGTGGACTTGTGAGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546572.1
CDS CCA 72 bp AGGTTCAAGAACTACAGGACTCCCCGGAACCAAGGCTaGCAAGGGAAGGTGATATTGACAAGTCAGAGCCCA +
Preference number: 6 (lower is better)
Translates to: RFKNYRTPRNQG*QGKVILTSQSP
Trigger: TGGGCTCTGACTTGTCAATATCACCTTCCCTTGCCAGCCTTGGTTCCGGGGAGTCCTGTAGTTCTTGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS CAA 90 bp AAAAAGGCCCACATCACGCCAAATGTTGATGCATCTCTTCCACACTaGCTCCCGGTGATGGATGAAGGCAGTTCTTGTGCCATGGTCCAG +
Preference number: 6 (lower is better)
Translates to: KKAHITPNVDASLPH*LPVMDEGSSCAMVQ
Trigger: CTGGACCATGGCACAAGAACTGCCTTCATCCATCACCGGGAGCAAGTGTGGAAGAGATGCATCAACATTTGGCGTGATGTGGGCCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 18 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547757.2
ENST00000547761.6
ENST00000548258.5
ENST00000548880.2
ENST00000549450.6
ENST00000549821.5
ENST00000549983.5
ENST00000550286.5
ENST00000551724.5
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
CDS CAA 90 bp CATCTGGTGTCTGTATTGTTGTCTCAGACAGATCTGCCACAATCGTaGCTGACTTTGCACCTCCAACGCACCCCTTTCCCTCACCACAAC +
Preference number: 6 (lower is better)
Translates to: HLVSVLLSQTDLPQS*LTLHLQRTPFPHHN
Trigger: GTTGTGGTGAGGGAAAGGGGTGCGTTGGAGGTGCAAAGTCAGCAACGATTGTGGCAGATCTGTCTGAGACAACAATACAGACACCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547757.2
ENST00000548880.2
ENST00000548931.6
ENST00000549450.6
ENST00000550033.5
ENST00000550286.5
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
ENST00000672900.1
CDS TCA 72 bp CAAATGTTGATGCATCTCTTCCACACTTGCTCCCGGTaGTGGATGAAGGCAGTTCTTGTGCCATGGTCCAGC +
Preference number: 6 (lower is better)
Translates to: QMLMHLFHTCSR*WMKAVLVPWSS
Trigger: GCTGGACCATGGCACAAGAACTGCCTTCATCCATCACCGGGAGCAAGTGTGGAAGAGATGCATCAACATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547757.2
ENST00000547761.6
ENST00000548258.5
ENST00000548880.2
ENST00000549450.6
ENST00000549821.5
ENST00000549983.5
ENST00000550286.5
ENST00000551724.5
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
CDS TCA 72 bp TATTGTTGTCTCAGACAGATCTGCCACAATCGTTGCTaGCTTTGCACCTCCAACGCACCCCTTTCCCTCACC +
Preference number: 6 (lower is better)
Translates to: YCCLRQICHNRC*LCTSNAPLSLT
Trigger: GGTGAGGGAAAGGGGTGCGTTGGAGGTGCAAAGTCAGCAACGATTGTGGCAGATCTGTCTGAGACAACAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547757.2
ENST00000548880.2
ENST00000548931.6
ENST00000549450.6
ENST00000550033.5
ENST00000550286.5
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
ENST00000672900.1
CDS TCA 72 bp CCACAAAGCTCCAGGGCTTGTGCACTCACCAATTTGTaGCTTGGGCAAATTCAGCGATCAGATCTTCGCTCC +
Preference number: 6 (lower is better)
Translates to: PQSSRACALTNL*LGQIQRSDLRS
Trigger: GGAGCGAAGATCTGATCGCTGAATTTGCCCAAGTCACAAATTGGTGAGTGCACAAGCCCTGGAGCTTTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS TCA 72 bp GGCCTCATTAGATTAACTGGGAAGATGGCTGTGGGCTaGGCCCTTCATCCTTGCCTCTCACCTTTCATAAGC +
Preference number: 6 (lower is better)
Translates to: GLIRLTGKMAVG*ALHPCLSPFIS
Trigger: GCTTATGAAAGGTGAGAGGCAAGGATGAAGGGCTCAGCCCACAGCCATCTTCCCAGTTAATCTAATGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000672900.1
CDS CCA 72 bp CTGAGCCAACAGGTGTCGGGGGTGAGTTCAAGAATATaGAGAGGAGATAACCACAAAACTAGGGAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: LSQQVSGVSSRI*RGDNHKTREGW
Trigger: CCAGCCTTCCCTAGTTTTGTGGTTATCTCCTCTCCATATTCTTGAACTCACCCCCGACACCTGTTGGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546562.6
ENST00000548880.2
ENST00000552161.6
ENST00000672900.1
CDS CCA 72 bp AAGCTCCAGGGCTTGTGCACTCACCAATTTGTGACTTaGGCAAATTCAGCGATCAGATCTTCGCTCCTGAGC +
Preference number: 6 (lower is better)
Translates to: KLQGLCTHQFVT*ANSAIRSSLLS
Trigger: GCTCAGGAGCGAAGATCTGATCGCTGAATTTGCCCAAGTCACAAATTGGTGAGTGCACAAGCCCTGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS CAA 72 bp CACATCACGCCAAATGTTGATGCATCTCTTCCACACTaGCTCCCGGTGATGGATGAAGGCAGTTCTTGTGCC +
Preference number: 6 (lower is better)
Translates to: HITPNVDASLPH*LPVMDEGSSCA
Trigger: GGCACAAGAACTGCCTTCATCCATCACCGGGAGCAAGTGTGGAAGAGATGCATCAACATTTGGCGTGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 18 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546393.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547757.2
ENST00000547761.6
ENST00000548258.5
ENST00000548880.2
ENST00000549450.6
ENST00000549821.5
ENST00000549983.5
ENST00000550286.5
ENST00000551724.5
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
CDS CAA 72 bp GGAGTAGGAGTCTTTGCCTTCTCCCCAAAGGGAGTTTaGAGGTTCAGGACTTCCTTTCCACAAAGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: GVGVFAFSPKGV*RFRTSFPQSSR
Trigger: CCTGGAGCTTTGTGGAAAGGAAGTCCTGAACCTCAAAACTCCCTTTGGGGAGAAGGCAAAGACTCCTACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS CAA 90 bp TCTGTATTGTTGTCTCAGACAGATCTGCCACAATCGTTGCTGACTTaGCACCTCCAACGCACCCCTTTCCCTCACCACAACGTTCTGGAA +
Preference number: 6 (lower is better)
Translates to: SVLLSQTDLPQSLLT*HLQRTPFPHHNVLE
Trigger: TTCCAGAACGTTGTGGTGAGGGAAAGGGGTGCGTTGGAGGTGCAAAGTCAGCAACGATTGTGGCAGATCTGTCTGAGACAACAATACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547757.2
ENST00000548880.2
ENST00000548931.6
ENST00000549450.6
ENST00000550033.5
ENST00000550286.5
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
ENST00000672900.1
CDS CAA 72 bp TCTGTATTGTTGTCTCAGACAGATCTGCCACAATCGTaGCTGACTTTGCACCTCCAACGCACCCCTTTCCCT +
Preference number: 6 (lower is better)
Translates to: SVLLSQTDLPQS*LTLHLQRTPFP
Trigger: AGGGAAAGGGGTGCGTTGGAGGTGCAAAGTCAGCAACGATTGTGGCAGATCTGTCTGAGACAACAATACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000209873.9
ENST00000394384.7
ENST00000546562.6
ENST00000547238.6
ENST00000547520.6
ENST00000547757.2
ENST00000548880.2
ENST00000548931.6
ENST00000549450.6
ENST00000550033.5
ENST00000550286.5
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
ENST00000672900.1
CDS CAA 72 bp AAAGCTCCAGGGCTTGTGCACTCACCAATTTGTGACTaGGGCAAATTCAGCGATCAGATCTTCGCTCCTGAG +
Preference number: 6 (lower is better)
Translates to: KAPGLVHSPICD*GKFSDQIFAPE
Trigger: CTCAGGAGCGAAGATCTGATCGCTGAATTTGCCCAAGTCACAAATTGGTGAGTGCACAAGCCCTGGAGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS CAA 90 bp GGGAGTTTTGAGGTTCAGGACTTCCTTTCCACAAAGCTCCAGGGCTaGTGCACTCACCAATTTGTGACTTGGGCAAATTCAGCGATCAGA +
Preference number: 6 (lower is better)
Translates to: GSFEVQDFLSTKLQG*CTHQFVTWANSAIR
Trigger: TCTGATCGCTGAATTTGCCCAAGTCACAAATTGGTGAGTGCACAAGCCCTGGAGCTTTGTGGAAAGGAAGTCCTGAACCTCAAAACTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS CAA 90 bp ATCAGAAAAGGAGTAGGAGTCTTTGCCTTCTCCCCAAAGGGAGTTTaGAGGTTCAGGACTTCCTTTCCACAAAGCTCCAGGGCTTGTGCA +
Preference number: 6 (lower is better)
Translates to: IRKGVGVFAFSPKGV*RFRTSFPQSSRACA
Trigger: TGCACAAGCCCTGGAGCTTTGTGGAAAGGAAGTCCTGAACCTCAAAACTCCCTTTGGGGAGAAGGCAAAGACTCCTACTCCTTTTCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000546393.7
ENST00000546562.6
ENST00000672900.1
CDS TCA 72 bp ACCCACTCAAACACTGTAGGGTTGAGGAAGCAGCTCTaGTTAAACCATTCACAGGCCTCTTACCAGGTACCT +
Preference number: 6 (lower is better)
Translates to: THSNTVGLRKQL*LNHSQASYQVP
Trigger: AGGTACCTGGTAAGAGGCCTGTGAATGGTTTAATCAGAGCTGCTTCCTCAACCCTACAGTGTTTGAGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000546562.6
ENST00000547520.6
ENST00000548880.2
ENST00000552161.6
ENST00000672900.1
CDS GCA 72 bp CCTGGCCTGGCACAAGTACTGTCCCCTCCTCCATACTaGTTATTTAACGTTTGTGGAACGCTTTTCACCATT +
Preference number: 6 (lower is better)
Translates to: PGLAQVLSPPPY*LFNVCGTLFTI
Trigger: AATGGTGAAAAGCGTTCCACAAACGTTAAATAAGCAGTATGGAGGAGGGGACAGTACTTGTGCCAGGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551724.5
CDS GCA 72 bp ACGGTGATTCAGTCTCTTCCCAAATCTTTAATTCCGTaGCATCTCCAACCCACCGCTGGGCTAAGTATAAGA +
Preference number: 6 (lower is better)
Translates to: TVIQSLPKSLIP*HLQPTAGLSIR
Trigger: TCTTATACTTAGCCCAGCGGTGGGTTGGAGATGGCACGGAATTAAAGATTTGGGAAGAGACTGAATCACCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547238.6
ENST00000547757.2
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
CDS CCA 72 bp GGAAGATTGATCCACAAATTAATCCTCCCAGGCCTGTaGATCACCCAGAGGAAAATACAGGCTATGTCACAG +
Preference number: 6 (lower is better)
Translates to: GRLIHKLILPGL*ITQRKIQAMSQ
Trigger: CTGTGACATAGCCTGTATTTTCCTCTGGGTGATCCACAGGCCTGGGAGGATTAATTTGTGGATCAATCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000547761.6
ENST00000549821.5
CDS CCA 72 bp CAAATCTTTAATTCCGTGCCATCTCCAACCCACCGCTaGGCTAAGTATAAGAGATTCCAGAGGTCTGTTTCC +
Preference number: 6 (lower is better)
Translates to: QIFNSVPSPTHR*AKYKRFQRSVS
Trigger: GGAAACAGACCTCTGGAATCTCTTATACTTAGCCCAGCGGTGGGTTGGAGATGGCACGGAATTAAAGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000547238.6
ENST00000547757.2
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
CDS TCA 72 bp TTAGGGGATCCTTTGTCAGTTGTAGGACAGGAAGATTaGTCCACCTGTAAGGTGAACTGGAGAGAAGGAACA +
Preference number: 6 (lower is better)
Translates to: LGDPLSVVGQED*STCKVNWREGT
Trigger: TGTTCCTTCTCTCCAGTTCACCTTACAGGTGGATCAATCTTCCTGTCCTACAACTGACAAAGGATCCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551724.5
CDS CAA 72 bp TTTAGGGGATCCTTTGTCAGTTGTAGGACAGGAAGATaGATCCACTATAGCACAAAAGTGAGGAGTGTGACG +
Preference number: 6 (lower is better)
Translates to: FRGSFVSCRTGR*IHYSTKVRSVT
Trigger: CGTCACACTCCTCACTTTTGTGCTATAGTGGATCAATCTTCCTGTCCTACAACTGACAAAGGATCCCCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000547238.6
ENST00000547757.2
ENST00000552161.6
ENST00000552876.5
ENST00000672797.1
CDS TCA 72 bp GAAAAATCACTCCGGCCTGCAACTTGCATCCTTCGATaGAACCTCGATTTTCACCATCAGGTTATAATGATC +
Preference number: 6 (lower is better)
Translates to: EKSLRPATCILR*NLDFHHQVIMI
Trigger: GATCATTATAACCTGATGGTGAAAATCGAGGTTTCATCGAAGGATGCAAGTTGCAGGCCGGAGTGATTTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000548258.5
ENST00000550286.5
CDS CCA 72 bp ATATGGAGAGGAGATAACCACAAAACTAGGGAAGGCTaGAGGGAAAAATACTTACCCTCTTCTTCTGAGTTT +
Preference number: 6 (lower is better)
Translates to: IWRGDNHKTREG*REKYLPSSSEF
Trigger: AAACTCAGAAGAAGAGGGTAAGTATTTTTCCCTCCAGCCTTCCCTAGTTTTGTGGTTATCTCCTCTCCATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000546562.6
ENST00000548880.2
ENST00000552161.6
ENST00000672900.1